BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016128
(394 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 313/393 (79%), Gaps = 1/393 (0%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E + PNSVT +S++SAC+ LLY++FGRQ+HGL +KIE DTM+GTALVDMY KCGC
Sbjct: 225 ESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCW 284
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A+ +F EL GSRN++TWN+MIAGMMLNG+S+ A+ELFE L EG +PD ATWN+MISG
Sbjct: 285 HWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISG 344
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
FSQ G EAFK F KMQS G++ SLK +TS+L AC+ LSAL+ GKE HGH IR +++ D
Sbjct: 345 FSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTD 404
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
E ++TALI MYMKCG ARR F QF+IKPDDPAFWNAMISGYGRNG+Y+SA EIF+ M
Sbjct: 405 EFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQM 464
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+EKV+PNSA+ V++LS C H G +D+ Q+F MM+ D+GL P EHFGCMVDLLGRSGR
Sbjct: 465 QEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGR 524
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
L EA+ELI E+PE +VSV+ SLLGAC H +S LGEEMA KL E+EP++PTPFVILSNIY
Sbjct: 525 LKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIY 584
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA-GIT 394
A GRW DV R+R+M+NDR L K PG S+ G+T
Sbjct: 585 AVQGRWGDVERVREMMNDRGLKKPPGCSSIGVT 617
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 142/270 (52%), Gaps = 39/270 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT SV+ ACAS+ + QVH L +K+ +SD + TA+V MY CG L A
Sbjct: 131 RPNSVTIASVLPACASV---ELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKK 187
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N++++N I+G++ NG ++F+ L
Sbjct: 188 VFDQIL-DKNVVSYNAFISGLLQNGAPHLVFDVFKDL----------------------- 223
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++S+G VP+ + S+LSAC+ L ++ G++ HG V++ ++N D + T
Sbjct: 224 -----------LESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGT 272
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG WA F + + WN+MI+G NG+ + AVE+F+ ++ E +
Sbjct: 273 ALVDMYSKCGCWHWAYGIFIELS-GSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGL 331
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+P+SA++ ++S G V +A + F M
Sbjct: 332 EPDSATWNTMISGFSQQGQVVEAFKFFHKM 361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA L+ K+ S+ ++ +L A A L++ G+ H +I+ + D A
Sbjct: 12 GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 71
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL MYMK S+A + F++ + + P+ N ISG+ RNG + A+ F +
Sbjct: 72 TALADMYMKLHLLSYALKVFEEMPHR-NLPSL-NVTISGFSRNGYFREALGAFKQVGLGN 129
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+PNS + +VL AC +D + + G++ +V + G L A
Sbjct: 130 FRPNSVTIASVLPACASV-ELDGQVHCLAI---KLGVESDIYVATAVVTMYSNCGELVLA 185
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+++ ++ + V Y++ + + L ++ L E E P ++S + A
Sbjct: 186 KKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSA 242
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 255/393 (64%), Positives = 313/393 (79%), Gaps = 1/393 (0%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E + PNSVT +S++SAC+ LLY++FGRQ+HGL +KIE DTM+GTALVDMY KCGC
Sbjct: 285 ESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCW 344
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A+ +F EL GSRN++TWN+MIAGMMLNG+S+ A+ELFE L EG +PD ATWN+MISG
Sbjct: 345 HWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISG 404
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
FSQ G EAFK F KMQS G++ SLK +TS+L AC+ LSAL+ GKE HGH IR +++ D
Sbjct: 405 FSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTD 464
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
E ++TALI MYMKCG ARR F QF+IKPDDPAFWNAMISGYGRNG+Y+SA EIF+ M
Sbjct: 465 EFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQM 524
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+EKV+PNSA+ V++LS C H G +D+ Q+F MM+ D+GL P EHFGCMVDLLGRSGR
Sbjct: 525 QEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGR 584
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
L EA+ELI E+PE +VSV+ SLLGAC H +S LGEEMA KL E+EP++PTPFVILSNIY
Sbjct: 585 LKEAQELIHEMPEASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSNIY 644
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA-GIT 394
A GRW DV R+R+M+NDR L K PG S+ G+T
Sbjct: 645 AVQGRWGDVERVREMMNDRGLKKPPGCSSIGVT 677
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 142/270 (52%), Gaps = 39/270 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT SV+ ACAS+ + QVH L +K+ +SD + TA+V MY CG L A
Sbjct: 191 RPNSVTIASVLPACASV---ELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKK 247
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N++++N I+G++ NG ++F+ L
Sbjct: 248 VFDQIL-DKNVVSYNAFISGLLQNGAPHLVFDVFKDL----------------------- 283
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++S+G VP+ + S+LSAC+ L ++ G++ HG V++ ++N D + T
Sbjct: 284 -----------LESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGT 332
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG WA F + + WN+MI+G NG+ + AVE+F+ ++ E +
Sbjct: 333 ALVDMYSKCGCWHWAYGIFIELS-GSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGL 391
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+P+SA++ ++S G V +A + F M
Sbjct: 392 EPDSATWNTMISGFSQQGQVVEAFKFFHKM 421
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA L+ K+ S+ ++ +L A A L++ G+ H +I+ + D A
Sbjct: 72 GFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAA 131
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL MYMK S+A + F++ + + P+ N ISG+ RNG + A+ F +
Sbjct: 132 TALADMYMKLHLLSYALKVFEEMPHR-NLPSL-NVTISGFSRNGYFREALGAFKQVGLGN 189
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+PNS + +VL AC +D + + G++ +V + G L A
Sbjct: 190 FRPNSVTIASVLPACASV-ELDGQVHCLAI---KLGVESDIYVATAVVTMYSNCGELVLA 245
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+++ ++ + V Y++ + + L ++ L E E P ++S + A
Sbjct: 246 KKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPNSVTLVSILSA 302
>gi|15227029|ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g02750
gi|2947066|gb|AAC05347.1| hypothetical protein [Arabidopsis thaliana]
gi|330250526|gb|AEC05620.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 511 bits (1317), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/390 (63%), Positives = 310/390 (79%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S+EPN VTF++ I+ACASLL LQ+GRQ+HGL +K E Q +TM+GTAL+DMY KC
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C A+ VF ELK +RN+++WN++I+GMM+NG+ E A+ELFE L EG KPD ATWNS+I
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLI 340
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGFSQLG EAFK FE+M S MVPSLKC+TS+LSAC+D+ LK GKE HGHVI+A
Sbjct: 341 SGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE 400
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + T+LI MYMKCG SWARR FD+FE KP DP FWN MISGYG++GE ESA+EIF+
Sbjct: 401 RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+++EKV+P+ A+F AVLSAC H G+V+K QIF +M +++G KP EH GCM+DLLGRS
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRS 520
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
GRL EA+E+I ++ EP+ SVY SLLG+C HL+ LGEE AMKL E+EPENP PFVILS+
Sbjct: 521 GRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA L RWEDV IRQ+I+ +QL KLPG+S
Sbjct: 581 IYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN TF ++ +CA L + GR +H +K D TALV MY+K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V E+ R I + N ++G++ N GF
Sbjct: 85 ALKVLDEMP-ERGIASVNAAVSGLLEN------------------------------GFC 113
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +AF++F + +G + V SVL C D+ G + H +++ +
Sbjct: 114 R-----DAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVY 165
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T+L+SMY +CG+ A R F++ + +NA ISG NG +F+LM++
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEK--VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK 223
Query: 245 -EKVKPNSASFVAVLSACG 262
+PN +FV ++AC
Sbjct: 224 FSSEEPNDVTFVNAITACA 242
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +CA L + G+ H V++ D ATAL+SMYMK Q + A + D E+
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLD--EMPE 94
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
A NA +SG NG A +F + NS + +VL C G ++ +Q+
Sbjct: 95 RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQL 151
Query: 274 FTM-MDDDFGLKPKQEHFGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ M F + + + G +V + R G A + ++P +V Y++ + +
Sbjct: 152 HCLAMKSGFEM---EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+L + +++ E P ++ I A
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
>gi|91805385|gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/390 (63%), Positives = 310/390 (79%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S+EPN VTF++ I+ACASLL LQ+GRQ+HGL +K E Q +TM+GTAL+DMY KC
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C A+ VF ELK +RN+++WN++I+GMM+NG+ E A+ELFE L EG KPD ATWNS+I
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLI 340
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGFSQLG EAFK FE+M S MVPSLKC+TS+LSAC+D+ LK GKE HGHVI+A
Sbjct: 341 SGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE 400
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + T+LI MYMKCG SWARR FD+FE KP DP FWN MISGYG++GE ESA+EIF+
Sbjct: 401 RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPRDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+++EKV+P+ A+F AVLSAC H G+V+K QIF +M +++G KP EH GCM+DLLGRS
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRS 520
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
GRL EA+E+I ++ EP+ SVY SLLG+C HL+ LGEE AMKL E+EPENP PFVILS+
Sbjct: 521 GRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA L RWEDV IRQ+I+ +QL KLPG+S
Sbjct: 581 IYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN TF ++ +CA L + GR +H +K D TALV MY+K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V E+ R I + N ++G++ N GF
Sbjct: 85 ALKVLDEMP-ERGIASVNAAVSGLLEN------------------------------GFC 113
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +AF++F + +G + V SVL C D+ G + H +++ +
Sbjct: 114 R-----DAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVY 165
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T+L+SMY +CG+ A R F++ + +NA ISG NG +F+LM++
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEK--VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK 223
Query: 245 -EKVKPNSASFVAVLSACG 262
+PN +FV ++AC
Sbjct: 224 FSSEEPNDVTFVNAITACA 242
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +CA L + G+ H V++ D ATAL+SMYMK Q + A + D E+
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLD--EMPE 94
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
A NA +SG NG A +F + NS + +VL C G ++ +Q+
Sbjct: 95 RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQL 151
Query: 274 FTM-MDDDFGLKPKQEHFGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ M F + + + G +V + R G A + ++P +V Y++ + +
Sbjct: 152 HCLAMKSGFEM---EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+L + +++ E P ++ I A
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
>gi|116830405|gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/390 (63%), Positives = 310/390 (79%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S+EPN VTF++ I+ACASLL LQ+GRQ+HGL +K E Q +TM+GTAL+DMY KC
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C A+ VF ELK +RN+++WN++I+GMM+NG+ E A+ELFE L EG KPD ATWNS+I
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLI 340
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGFSQLG EAFK FE+M S MVPSLKC+TS+LSAC+D+ LK GKE HGHVI+A
Sbjct: 341 SGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE 400
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + T+LI MYMKCG SWARR FD+FE KP DP FWN MISGYG++GE ESA+EIF+
Sbjct: 401 RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFE 460
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+++EKV+P+ A+F AVLSAC H G+V+K QIF +M +++G KP EH GCM+DLLGRS
Sbjct: 461 LLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRS 520
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
GRL EA+E+I ++ EP+ SVY SLLG+C HL+ LGEE AMKL E+EPENP PFVILS+
Sbjct: 521 GRLREAKEVIDQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSS 580
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA L RWEDV IRQ+I+ +QL KLPG+S
Sbjct: 581 IYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 113/259 (43%), Gaps = 42/259 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN TF ++ +CA L + GR +H +K D TALV MY+K +
Sbjct: 25 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTD 84
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V E+ R I + N ++G++ N GF
Sbjct: 85 ALKVLDEMP-ERGIASVNAAVSGLLEN------------------------------GFC 113
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +AF++F + +G + V SVL C D+ G + H +++ +
Sbjct: 114 R-----DAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVY 165
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T+L+SMY +CG+ A R F++ + +NA ISG NG +F+LM++
Sbjct: 166 VGTSLVSMYSRCGEWVLAARMFEK--VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRK 223
Query: 245 -EKVKPNSASFVAVLSACG 262
+PN +FV ++AC
Sbjct: 224 FSSEEPNDVTFVNAITACA 242
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 10/212 (4%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +CA L + G+ H V++ D ATAL+SMYMK Q + A + D E+
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLD--EMPE 94
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
A NA +SG NG A +F + NS + +VL C G ++ +Q+
Sbjct: 95 RGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQL 151
Query: 274 FTM-MDDDFGLKPKQEHFGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ M F + + + G +V + R G A + ++P +V Y++ + +
Sbjct: 152 HCLAMKSGFEM---EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+L + +++ E P ++ I A
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITA 240
>gi|356501914|ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 627
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 243/390 (62%), Positives = 302/390 (77%), Gaps = 1/390 (0%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+EC+ + NSVT +SV+SAC SL ++FGRQVHG+ +K+E M+ TALVDMY KCG
Sbjct: 233 EECVECKLNSVTLVSVLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKCGF 292
Query: 62 LPCAHNVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A VF ++G+R N++TWN+MIAGMMLN SE+A+++F+ L EG KPD ATWNSMI
Sbjct: 293 WRSAFEVFTGVEGNRRNLITWNSMIAGMMLNKESERAVDMFQRLESEGLKPDSATWNSMI 352
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGF+QLG EAFK F +MQS G+ P LK VTS+LSACAD S L+ GKE HG +R D+N
Sbjct: 353 SGFAQLGECGEAFKYFGQMQSVGVAPCLKIVTSLLSACADSSMLQHGKEIHGLSLRTDIN 412
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D+ + TAL+ MYMKCG SWAR FDQ++ KPDDPAFWNAMI GYGRNG+YESA EIFD
Sbjct: 413 RDDFLVTALVDMYMKCGLASWARGVFDQYDAKPDDPAFWNAMIGGYGRNGDYESAFEIFD 472
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M +E V+PNSA+FV+VLSAC H G VD+ L F MM ++GL+PK EHFGC+VDLLGRS
Sbjct: 473 EMLEEMVRPNSATFVSVLSACSHTGQVDRGLHFFRMMRIEYGLQPKPEHFGCIVDLLGRS 532
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
GRL EA++L+ EL EP SV+ SLLGAC C+L+S+LGEEMA KL ++EPENP P V+LSN
Sbjct: 533 GRLSEAQDLMEELAEPPASVFASLLGACRCYLDSNLGEEMAKKLLDVEPENPAPLVVLSN 592
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYAGLGRW++V RIR +I D+ L KL G S
Sbjct: 593 IYAGLGRWKEVERIRGVITDKGLDKLSGFS 622
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 37/303 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT ++ + +H +K+ + D + T+LV Y KCG + A
Sbjct: 136 RPNSVTIACMLGV--PRVGANHVEMMHCCAVKLGVEFDAYVATSLVTAYCKCGEVVSASK 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+EL ++++++N ++G++ NG +++F+ +
Sbjct: 194 VFEELP-VKSVVSYNAFVSGLLQNGVPRLVLDVFKEM----------------------- 229
Query: 128 MRFEAFKLFE-KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
MR E + E K+ S +V SVLSAC L +++ G++ HG V++ + +
Sbjct: 230 MRGE--ECVECKLNSVTLV-------SVLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVM 280
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ MY KCG A F E + WN+MI+G N E E AV++F ++ E
Sbjct: 281 TALVDMYSKCGFWRSAFEVFTGVEGNRRNLITWNSMIAGMMLNKESERAVDMFQRLESEG 340
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+SA++ +++S G +A + F M G+ P + ++ S L
Sbjct: 341 LKPDSATWNSMISGFAQLGECGEAFKYFGQM-QSVGVAPCLKIVTSLLSACADSSMLQHG 399
Query: 307 REL 309
+E+
Sbjct: 400 KEI 402
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 51/270 (18%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ C S +S TF ++ AC +L + +H LK SD +AL Y
Sbjct: 27 LHSCSSHTLHSFTFPTLFKACTNLRSPSHTQTLHAHLLKTGFHSDPYASSALTAAYAA-- 84
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
R+ L A++ F+ + +P+ A+ N+ +
Sbjct: 85 -------------NPRHFL----------------DALKAFDEMP----QPNVASLNAAL 111
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE----THGHVIR 176
SGFS+ G R EA ++F + + P+ SV AC L ++G H ++
Sbjct: 112 SGFSRNGRRGEALRVFRRAGLGPLRPN-----SVTIACM-LGVPRVGANHVEMMHCCAVK 165
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
+ D +AT+L++ Y KCG+ A + F++ +K +NA +SG +NG +
Sbjct: 166 LGVEFDAYVATSLVTAYCKCGEVVSASKVFEELPVK--SVVSYNAFVSGLLQNGVPRLVL 223
Query: 237 EIF-DLMQQE---KVKPNSASFVAVLSACG 262
++F ++M+ E + K NS + V+VLSACG
Sbjct: 224 DVFKEMMRGEECVECKLNSVTLVSVLSACG 253
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 17/206 (8%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDES 184
G EA LF + S +L T ++ AC +L + + H H+++ + D
Sbjct: 15 GFYREALSLFSHLHSCSS-HTLHSFTFPTLFKACTNLRSPSHTQTLHAHLLKTGFHSDPY 73
Query: 185 MATALISMYMKCGQPSWARRFFDQF----EIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++AL + Y P R F D E+ + A NA +SG+ RNG A+ +F
Sbjct: 74 ASSALTAAY--AANP---RHFLDALKAFDEMPQPNVASLNAALSGFSRNGRRGEALRVFR 128
Query: 241 LMQQEKVKPNSASFVAVLSACG-HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
++PNS + +L A HV+ + +F +V +
Sbjct: 129 RAGLGPLRPNSVTIACMLGVPRVGANHVEMMHCCAVKLGVEFDAYVATS----LVTAYCK 184
Query: 300 SGRLDEARELIRELPEPTVSVYHSLL 325
G + A ++ ELP +V Y++ +
Sbjct: 185 CGEVVSASKVFEELPVKSVVSYNAFV 210
>gi|297817888|ref|XP_002876827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322665|gb|EFH53086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/390 (62%), Positives = 306/390 (78%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S+EPN VTF++ I+ACASLL LQ+GRQ+HGL +K E Q DTM+GTAL+DMY KC
Sbjct: 219 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKTEFQFDTMVGTALIDMYSKCR 278
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C A++VF ELK +RN+++WN++I+GMMLNG+ E A+ELFE L EG KPD ATWNS+I
Sbjct: 279 CWKSAYSVFTELKDTRNLISWNSVISGMMLNGQHETAVELFEQLDSEGLKPDSATWNSLI 338
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGFSQLG EAFK FE+M S MVPSLKC+TS+LSAC+D+ LK GKE HGHVI+A
Sbjct: 339 SGFSQLGKVVEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAE 398
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + T+LI MYMKCG ARR FD+FE KP DP FWN MISGYG++GE ESA+EIFD
Sbjct: 399 RDIFVLTSLIDMYMKCGFSLLARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFD 458
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+++E+V+P+ A+F AVLSAC H G+V+K QIF +M +++G KP EH GCMVDLLGR
Sbjct: 459 LLREEEVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMVDLLGRF 518
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
GRL EA+E+I + +P+ SVY SLLG+C HL+ LGEE AMKL E+EP NP PFVILS+
Sbjct: 519 GRLREAKEVIDRMSDPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPGNPAPFVILSS 578
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA L RWEDV IRQ+I+ +QL KLPG+S
Sbjct: 579 IYAALERWEDVESIRQVIDQKQLVKLPGLS 608
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 42/259 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN TF ++ +CA L + GR +H +K D TALV MY+K +
Sbjct: 23 LSHSPNKFTFPPLLKSCAKLGDVVQGRILHAHVVKTGFFVDVFTATALVSMYMKVKQVTD 82
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V E+ R I + N ++G++ N GFS
Sbjct: 83 ALKVLDEMP-ERGIASVNAAVSGLLEN------------------------------GFS 111
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +AF++F + +G + V SVL C D+ G + H +++ +
Sbjct: 112 R-----DAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQMHCLAMKSGFEMEVY 163
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T+L+SMY +CG+ A R F++ + +NA ISG NG +F+LM++
Sbjct: 164 VGTSLVSMYSRCGEWILAARMFEK--VPHKSVVTYNAFISGLMENGVMHLVPNVFNLMRK 221
Query: 245 -EKVKPNSASFVAVLSACG 262
+PN +FV ++AC
Sbjct: 222 FSSEEPNDVTFVNAITACA 240
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +CA L + G+ H HV++ D ATAL+SMYMK Q + A + D E+
Sbjct: 35 LLKSCAKLGDVVQGRILHAHVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLD--EMPE 92
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
A NA +SG NG A +F + NS + +VL C G ++ +Q+
Sbjct: 93 RGIASVNAAVSGLLENGFSRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQM 149
Query: 274 FTM-MDDDFGLKPKQEHFGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ M F + + + G +V + R G A + ++P +V Y++ +
Sbjct: 150 HCLAMKSGFEM---EVYVGTSLVSMYSRCGEWILAARMFEKVPHKSVVTYNAFI 200
>gi|357486633|ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 223/386 (57%), Positives = 291/386 (75%), Gaps = 2/386 (0%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L ++PN VT +SV+SACA+L ++ G+QVHGL++K+E M+ T+LVDMY KCGC
Sbjct: 232 LEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGS 291
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +VF + RN++TWN+MIAGMM+N SE+A+ELFE + EG PD ATWNS+ISGF+
Sbjct: 292 AFDVFSRSE-KRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFA 350
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G+ EAFK F KMQ G+ P LK +TS+LS C D L+ K HG+ +R ++KD+
Sbjct: 351 QKGVCVEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDF 410
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ATAL+ YMKCG S+AR FDQF++KPDDPAFWNAMI GYG NG+YESA E+F M
Sbjct: 411 LATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLD 470
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E V+PNSA+FV+VLSAC H+G +++ L+ F M+ +GL PK EHFGC+VDLLGR+G+L
Sbjct: 471 EMVQPNSATFVSVLSACSHSGQIERGLRFFRMI-RKYGLDPKPEHFGCVVDLLGRAGQLG 529
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
EAR+L++EL EP SV+ SLLGAC C+L+S+LGEEMAMKL ++EP+NP P V+LSNIYA
Sbjct: 530 EARDLVQELAEPPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPAPLVVLSNIYAA 589
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGRW +V RIR +I D+ L K GIS
Sbjct: 590 LGRWSEVERIRGLITDKGLDKNSGIS 615
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 148/302 (49%), Gaps = 39/302 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT +S++SA + +QVH L K+ + D + T+LV Y KCG L ++
Sbjct: 134 RPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNK 192
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L+ +N++T+N ++G++ NG ++F+ +
Sbjct: 193 VFENLR-VKNVVTYNAFMSGLLQNGFHRVVFDVFKDM----------------------- 228
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
L EK P+ + SV+SACA LS ++LGK+ HG ++ + + T
Sbjct: 229 ----TMNLEEK-------PNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVT 277
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG A F + E + + WN+MI+G N E E AVE+F+ M E +
Sbjct: 278 SLVDMYSKCGCWGSAFDVFSRSEKR--NLITWNSMIAGMMMNSESERAVELFERMVDEGI 335
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+SA++ +++S G +A + F+ M G+ P + ++ + G S L A+
Sbjct: 336 LPDSATWNSLISGFAQKGVCVEAFKYFSKMQCA-GVAPCLKILTSLLSVCGDSCVLRSAK 394
Query: 308 EL 309
+
Sbjct: 395 AI 396
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+C P S++S C L+ + +HG L+I D + TALVD Y+KCGC+
Sbjct: 366 QCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCV 425
Query: 63 PCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A VF + + WN MI G NG E A E+F + E +P+ AT+ S++S
Sbjct: 426 SFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLS 485
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPS---LKCVTSVLSACADL 161
S G + F ++ G+ P CV +L L
Sbjct: 486 ACSHSGQIERGLRFFRMIRKYGLDPKPEHFGCVVDLLGRAGQL 528
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 9/196 (4%)
Query: 80 TWNTMIAGMMLNGRS-EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK 138
T +IA N RS A+ELF+ + +P +N+++SG S+ G R +A LF +
Sbjct: 72 TSTALIASYAANTRSFHYALELFDEMP----QPTITAFNAVLSGLSRNGPRGQAVWLFRQ 127
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
+ + P+ + S+LSA D+ ++ H + + D ++T+L++ Y KCG
Sbjct: 128 IGFWNIRPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGV 186
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAV 257
+ + F+ +K + +NA +SG +NG + ++F D+ + KPN + V+V
Sbjct: 187 LVSSNKVFENLRVK--NVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSV 244
Query: 258 LSACGHAGHVDKALQI 273
+SAC ++ Q+
Sbjct: 245 VSACATLSNIRLGKQV 260
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 14/240 (5%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ EA L+ + S+ P+ +L AC++LS+ + H H+ + + +
Sbjct: 14 GLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTS 73
Query: 187 TALISMYMKCGQP-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI+ Y + +A FD+ +P AF NA++SG RNG AV +F +
Sbjct: 74 TALIASYAANTRSFHYALELFDEMP-QPTITAF-NAVLSGLSRNGPRGQAVWLFRQIGFW 131
Query: 246 KVKPNSASFVAVLSA--CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
++PNS + V++LSA + HV + + + ++ + +V + G L
Sbjct: 132 NIRPNSVTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTS----LVTAYSKCGVL 187
Query: 304 DEARELIRELPEPTVSVYHS----LLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
+ ++ L V Y++ LL + + D+ ++M M L+E +P T ++S
Sbjct: 188 VSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEE-KPNKVTLVSVVS 246
>gi|356497858|ref|XP_003517773.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g02750-like [Glycine max]
Length = 505
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/350 (62%), Positives = 270/350 (77%), Gaps = 1/350 (0%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMEL 100
K + TM GT+LVD+Y KCG A VF+ ++G+R N++TWN+MIA MMLN SE+A+++
Sbjct: 151 KSNRTMKGTSLVDLYSKCGFWHFAFEVFKGVEGNRRNLITWNSMIARMMLNKESERAVDM 210
Query: 101 FEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
F+ L EG KPD ATWNSMISGF+QLG+ EAFK F +MQ G+ P LK VTS+LSA A+
Sbjct: 211 FQRLESEGLKPDSATWNSMISGFAQLGVCGEAFKYFREMQYVGVAPCLKIVTSLLSASAN 270
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
S L+ GKE HG +R D+N+D+ +ATAL+ +YMK G PSWAR FDQF+ KPDDPAFWN
Sbjct: 271 SSMLRRGKEIHGFALRTDINRDDLLATALVDIYMKSGHPSWARGVFDQFDAKPDDPAFWN 330
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
AMI GYGRN +YESA EIFD M +E V+PN A+FV+ LSAC H G VD+ L F MM +
Sbjct: 331 AMIGGYGRNRDYESASEIFDEMLEEMVQPNMATFVSDLSACSHMGQVDRGLHFFRMMGKE 390
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+GL+PK EHFGC+VDLLGRSGRL EA +L++EL EP VSV+ SLLGAC C+L+S+LGEEM
Sbjct: 391 YGLQPKPEHFGCIVDLLGRSGRLGEAXDLMQELAEPPVSVFASLLGACRCYLDSNLGEEM 450
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A KL ++EPENP P V+LSNIY GLGRW++V RIR MI D+ L KL G S
Sbjct: 451 AKKLLDIEPENPAPLVVLSNIYVGLGRWKEVERIRGMITDKGLDKLSGFS 500
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS-RNILTWNTMI 85
L+ G+++HG L+ + D ++ TALVD+Y+K G A VF + + WN MI
Sbjct: 274 LRRGKEIHGFALRTDINRDDLLATALVDIYMKSGHPSWARGVFDQFDAKPDDPAFWNAMI 333
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGM 144
G N E A E+F+ + E +P+ AT+ S +S S +G F M + G+
Sbjct: 334 GGYGRNRDYESASEIFDEMLEEMVQPNMATFVSDLSACSHMGQVDRGLHFFRMMGKEYGL 393
Query: 145 VPS---LKCVTSVLSACADL 161
P C+ +L L
Sbjct: 394 QPKPEHFGCIVDLLGRSGRL 413
>gi|255558198|ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540618|gb|EEF42181.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 593
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 201/264 (76%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E + +PNS+T +SVI+AC++LLY+QFG QVH K + DTM+GT+LVDMY KCG
Sbjct: 326 MREYSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVGTSLVDMYSKCG 385
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A+NVF E+ ++N++TWN+MIAGMMLN +S+ A+ELFE L +G +PD ATWNSMI
Sbjct: 386 YWKWAYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFELLESQGLEPDSATWNSMI 445
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGF QL EAFK F+KMQ +GMVPSLK VTS+L+ACA L+AL+ GKE HGHV+R ++N
Sbjct: 446 SGFEQLDKGVEAFKFFKKMQLSGMVPSLKSVTSLLAACASLTALQCGKEIHGHVVRTNMN 505
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
DE MAT LI MYMKCG W +R FDQFEIKP DPA WNA+ISGY RNGE ES E+FD
Sbjct: 506 FDEFMATGLIDMYMKCGFSLWGQRVFDQFEIKPKDPAIWNALISGYARNGENESVFEVFD 565
Query: 241 LMQQEKVKPNSASFVAVLSACGHA 264
M +EKV+PN +F VL+ CGH
Sbjct: 566 QMLEEKVEPNLTTFTGVLTVCGHT 589
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 132/268 (49%), Gaps = 44/268 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT SV+ AC S+ Q+H +K+ + D + T+LV Y CG L A
Sbjct: 234 RPNSVTIASVLPACDSV---DLSVQMHCCAIKLGVEMDVYVATSLVTTYSGCGHLTLATK 290
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ +R ++++N ++G++ N G
Sbjct: 291 VFGEMP-NRTVVSYNAFVSGLLHN-----------------------------------G 314
Query: 128 MRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ K+F+ M+ + + P+ + SV++AC+ L ++ G + H + + + D +
Sbjct: 315 VTNVVLKVFKDMREYSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVG 374
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+L+ MY KCG WA F++ + WN+MI+G N + ++A+E+F+L++ +
Sbjct: 375 TSLVDMYSKCGYWKWAYNVFNEMN-DNKNLITWNSMIAGMMLNAQSQNAIELFELLESQG 433
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF 274
++P+SA++ +++S +DK ++ F
Sbjct: 434 LEPDSATWNSMISG---FEQLDKGVEAF 458
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 64/361 (17%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ TF +++ ACA L + +H +K + TAL MY++ LP A
Sbjct: 131 SIHPHQFTFPALLKACAKLNSPLQAQIIHTHLIKTGFNLNIYTATALTSMYMQLALLPDA 190
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD--PATWNSMISGF 123
VF E+ PD A++N+ ISGF
Sbjct: 191 MKVFDEM--------------------------------------PDRNQASFNATISGF 212
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
SQ G EA +F++M G P+ + SVL AC ++ L + H I+ + D
Sbjct: 213 SQKGCCMEALIVFKEMAFCGFRPNSVTIASVLPAC---DSVDLSVQMHCCAIKLGVEMDV 269
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLM 242
+AT+L++ Y CG + A + F E+ +NA +SG NG +++F D+
Sbjct: 270 YVATSLVTTYSGCGHLTLATKVFG--EMPNRTVVSYNAFVSGLLHNGVTNVVLKVFKDMR 327
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-------MVD 295
+ +KPNS + V+V++AC ++ +Q+ + K+ GC +VD
Sbjct: 328 EYSTLKPNSLTLVSVIAACSTLLYIQFGMQVHVFL--------KKTQMGCDTMVGTSLVD 379
Query: 296 LLGRSGRLDEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENP 352
+ + G A + E+ + + ++S++ + S E+ ++ Q +EP++
Sbjct: 380 MYSKCGYWKWAYNVFNEMNDNKNLITWNSMIAGMMLNAQSQNAIELFELLESQGLEPDSA 439
Query: 353 T 353
T
Sbjct: 440 T 440
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 22/245 (8%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA L ++ S + P ++L ACA L++ + H H+I+ N + A
Sbjct: 115 GFYKEAISLHSRLHSASIHPHQFTFPALLKACAKLNSPLQAQIIHTHLIKTGFNLNIYTA 174
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL SMYM+ A + FD+ PD + A +NA ISG+ + G A+ +F M
Sbjct: 175 TALTSMYMQLALLPDAMKVFDEM---PDRNQASFNATISGFSQKGCCMEALIVFKEMAFC 231
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIF-------TMMDDDFGLKPKQEHFGCMVDLLG 298
+PNS + +VL AC VD ++Q+ MD + GC
Sbjct: 232 GFRPNSVTIASVLPAC---DSVDLSVQMHCCAIKLGVEMDVYVATSLVTTYSGC------ 282
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
G L A ++ E+P TV Y++ + + +++ ++ ++E P ++
Sbjct: 283 --GHLTLATKVFGEMPNRTVVSYNAFVSGLLHNGVTNVVLKVFKDMREYSTLKPNSLTLV 340
Query: 359 SNIYA 363
S I A
Sbjct: 341 SVIAA 345
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 239/384 (62%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTF+S++ AC+ L+ GRQ+H K+ +SD + TA+ +MY KCG + A V
Sbjct: 384 PNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQV 443
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ ++N++ W +++ + G A ++F ++ + +WN MI+G++Q G
Sbjct: 444 FSKME-NKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTR----NVVSWNLMIAGYAQSGD 498
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F+L M+ G P + S+L AC LSAL+ GK H ++ L D +AT+
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATS 558
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ + AR FD+ I D WNAM++GYG++G AV++F M +E+V
Sbjct: 559 LIGMYSKCGEVTEARTVFDK--ISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVP 616
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F AV+SACG AG V + +IF +M +DF +KP ++H+GCMVDLLGR+GRL EA E
Sbjct: 617 PNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEE 676
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP +SV+H+LLGAC H N L E A + +EP N + +V LSNIYA GR
Sbjct: 677 FIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGR 736
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+D ++R++++D+ L K G S+
Sbjct: 737 WDDSTKVRKVMDDKGLKKDRGESS 760
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 155/323 (47%), Gaps = 44/323 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN +TF+S++ AC + L+ R++H + ++D + TAL+ MY KCG + A
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+FQ++K RN+++W +I + + +A EL+E + G P+ T+
Sbjct: 236 IFQKMK-ERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTF----------- 283
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
S+L++C AL G+ H H+ L D +A
Sbjct: 284 ------------------------VSLLNSCNTPEALNRGRRIHSHISERGLETDVVVAN 319
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG--EYESAVEIFDL---M 242
ALI+MY KC AR FD+ + D W+AMI+GY ++G + ES E+F L M
Sbjct: 320 ALITMYCKCNCIQDARETFDRMSKR--DVISWSAMIAGYAQSGYQDKESLDEVFQLLERM 377
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++E V PN +F+++L AC G +++ QI + G + + + ++ + G
Sbjct: 378 RREGVFPNKVTFMSILKACSVHGALEQGRQIHAEI-SKVGFESDRSLQTAIFNMYAKCGS 436
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+ EA ++ ++ V + SLL
Sbjct: 437 IYEAEQVFSKMENKNVVAWASLL 459
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 72/383 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VTF+S++++C + L GR++H + ++D ++ AL+ MY KC C+ A
Sbjct: 278 PNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARET 337
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + K D +W++MI+G++Q G
Sbjct: 338 FDRMS------------------------------------KRDVISWSAMIAGYAQSGY 361
Query: 129 RF-----EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F+L E+M+ G+ P+ S+L AC+ AL+ G++ H + + D
Sbjct: 362 QDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDR 421
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIK-----------------------------PD 214
S+ TA+ +MY KCG A + F + E K
Sbjct: 422 SLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTR 481
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ WN MI+GY ++G+ E+ M+ E +P+ + +++L ACG +++ ++
Sbjct: 482 NVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG-KLV 540
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH-LN 333
GL+ ++ + + G + EAR + ++ ++++L H +
Sbjct: 541 HAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIG 600
Query: 334 SDLGEEMAMKLQEMEPENPTPFV 356
+ + L+E P N F
Sbjct: 601 PEAVDLFKRMLKERVPPNEITFT 623
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 39/317 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T+ +I CA L + G+ VH ++ D +G +L++ Y K G + VF
Sbjct: 77 NSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVF 136
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ M L D TW+SMI+ ++
Sbjct: 137 RR----------------MTLR--------------------DVVTWSSMIAAYAGNNHP 160
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+AF FE+M+ + P+ S+L AC + S L+ +E H V + + D ++ATAL
Sbjct: 161 AKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATAL 220
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY KCG+ S A F + +K + W A+I ++ + A E+++ M Q + P
Sbjct: 221 ITMYSKCGEISLACEIFQK--MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISP 278
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ +FV++L++C +++ +I + + + GL+ ++ + + + +ARE
Sbjct: 279 NAVTFVSLLNSCNTPEALNRGRRIHSHISER-GLETDVVVANALITMYCKCNCIQDARET 337
Query: 310 IRELPEPTVSVYHSLLG 326
+ + V + +++
Sbjct: 338 FDRMSKRDVISWSAMIA 354
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 137/289 (47%), Gaps = 40/289 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT IS++ AC +L L+ G+ VH +K+ +SDT++ T+L+ MY KCG + A
Sbjct: 515 QPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEART 574
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +R+ + WN M+AG +G +A++LF+ + E P+ T+ ++IS + G
Sbjct: 575 VFDKI-SNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAG 633
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E ++F MQ D +K GK+ +G
Sbjct: 634 LVQEGREIFRIMQE------------------DFR-MKPGKQHYG--------------- 659
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ + + G+ A F + +P D + W+A++ + + A + ++
Sbjct: 660 CMVDLLGRAGRLQEAEEFIQRMPCEP-DISVWHALLGACKSHDNVQLAE--WAAHHILRL 716
Query: 248 KPNSASFVAVLSAC-GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+P++AS LS AG D + ++ +MDD GLK + +D
Sbjct: 717 EPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDK-GLKKDRGESSIEID 764
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
EA +L ++ G++ + ++ CA L + GK H + L D + +LI
Sbjct: 61 EAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLI 120
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+ Y K G + + F + ++ D W++MI+ Y N A + F+ M+ ++PN
Sbjct: 121 NFYSKFGDVASVEQVFRRMTLR--DVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F+++L AC + ++KA +I T++ G++ ++ + + G + A E+
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHTVVKAS-GMETDVAVATALITMYSKCGEISLACEIF 237
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSN 360
+++ E V + +++ A H + E+ K LQ N FV L N
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLN 288
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/384 (39%), Positives = 235/384 (61%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTF+S++ AC + L+ GRQ+H K+ + D + TA+ +MY KCG + A V
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ ++N++ W + ++ + G A ++F + + +WN MI+G++Q G
Sbjct: 422 FSKM-ANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP----TRNVVSWNLMIAGYAQNGD 476
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F+L M++ G P V ++L AC L+ L+ GK H ++ L D +AT+
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATS 536
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ + AR FD+ + D WNAM++GYG++G+ AV++F M +E+V
Sbjct: 537 LIGMYSKCGQVAEARTVFDKMSNR--DTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVS 594
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN + AV+SAC AG V + +IF MM +DF + P+++H+GCMVDLLGR+GRL EA E
Sbjct: 595 PNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEE 654
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP +SV+H+LLGAC H N L E A + E+EP + ++ LSNIYA GR
Sbjct: 655 FIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGR 714
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+D ++R++++DR L K G S+
Sbjct: 715 WDDSTKVRRVMDDRGLKKDRGESS 738
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 156/323 (48%), Gaps = 44/323 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN +TF+S++ AC + L+ GR++H + + ++D + TAL+ MY KCG + A
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RN+++W ++I +Q
Sbjct: 214 VFHKMT-ERNVVSWT-----------------------------------AIIQANAQHR 237
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF+L+E+M G+ P+ S+L++C AL G+ H H+ L D +A
Sbjct: 238 KLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVAN 297
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG--EYESAVEIFDL---M 242
ALI+MY KC AR FD+ + D W+AMI+GY ++G + ES E+F L M
Sbjct: 298 ALITMYCKCNSVQEAREIFDRMSKR--DVISWSAMIAGYAQSGYKDKESIDEVFQLLERM 355
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++E V PN +F+++L AC G +++ QI + G + + + ++ + G
Sbjct: 356 RREGVFPNKVTFMSILRACTAHGALEQGRQIHAEL-SKVGFELDRSLQTAIFNMYAKCGS 414
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+ EA ++ ++ V + S L
Sbjct: 415 IYEAEQVFSKMANKNVVAWTSFL 437
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T+ VI CA + G+ VH ++ + D +G +L++ Y K + A VF
Sbjct: 55 NSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVF 114
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ M L D TW+SMI+ ++
Sbjct: 115 RR----------------MTLR--------------------DVVTWSSMIAAYAGNNHP 138
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+AF FE+M + P+ S+L AC + S L+ G++ H V + D ++ATAL
Sbjct: 139 AKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATAL 198
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY KCG+ S A F + + + W A+I ++ + A E+++ M Q + P
Sbjct: 199 ITMYSKCGEISVACEVFHK--MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISP 256
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ +FV++L++C +++ +I + + + GL+ ++ + + + EARE+
Sbjct: 257 NAVTFVSLLNSCNTPEALNRGRRIHSHISER-GLETDMIVANALITMYCKCNSVQEAREI 315
Query: 310 IRELPEPTVSVYHSLLG 326
+ + V + +++
Sbjct: 316 FDRMSKRDVISWSAMIA 332
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 50/294 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT I+++ AC +L L+ G+ VH +K+ +SDT++ T+L+ MY KCG + A
Sbjct: 493 QPDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEART 552
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +R+ + WN M+AG +G +A++LF+ + E P+ T ++IS S+ G
Sbjct: 553 VFDKM-SNRDTVAWNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAG 611
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E ++F MQ M P K+ +G
Sbjct: 612 LVQEGREIFRMMQEDFKMTPR--------------------KQHYG-------------- 637
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLM 242
++ + + G+ A F +P D + W+A++ + + +A I +L
Sbjct: 638 -CMVDLLGRAGRLQEAEEFIQSMPCEP-DISVWHALLGACKSHNNVQLAERAAHHILEL- 694
Query: 243 QQEKVKPNSASFVAVLSAC-GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+P+ AS LS AG D + ++ +MDD GLK + +D
Sbjct: 695 -----EPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDR-GLKKDRGESSIEID 742
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 106/234 (45%), Gaps = 10/234 (4%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
EA +L ++ G++ + V+ CA + GK H + + D + +LI
Sbjct: 39 EAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLI 98
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+ Y K + A + F + ++ D W++MI+ Y N A + F+ M ++PN
Sbjct: 99 NFYSKFEDVASAEQVFRRMTLR--DVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F+++L AC + ++K +I T++ G++ ++ + + G + A E+
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHTIV-KAMGMETDVAVATALITMYSKCGEISVACEVF 215
Query: 311 RELPEPTVSVYHSLLGACWCH--LNS--DLGEEMAMKLQEMEPENPTPFVILSN 360
++ E V + +++ A H LN +L E+M LQ N FV L N
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQM---LQAGISPNAVTFVSLLN 266
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/388 (41%), Positives = 240/388 (61%), Gaps = 9/388 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS +PN TF I +C++LL L GRQ H L + D + +ALVDMY KCG L
Sbjct: 70 LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 129
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ RNI++W +MI G + N + +A+ +F+G+A + D +WNS+I+ ++
Sbjct: 130 ARTLFDEI-SHRNIVSWTSMITGYVQNDDAHRALRVFDGMA----ERDVISWNSIIAVYA 184
Query: 125 QLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q GM E+ ++F +M G + + +++VL ACA + +LGK H VI+ L +
Sbjct: 185 QNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNV 244
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ T++I MY KCG+ AR+ FD+ ++ + W+AM++GYG +G + A+E+F M
Sbjct: 245 FVGTSIIDMYCKCGKVEMARKAFDR--MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMN 302
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
VKPN +FV+VL+AC HAG +++ F M +F ++P EH+GCMVDLLGR+G L
Sbjct: 303 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYL 362
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA +LI+ + P V+ +LLGAC H N DLGE A KL E++P+N +V+LSNIY
Sbjct: 363 KEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIY 422
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A GRWEDV R+R ++ + L K PG S
Sbjct: 423 ADAGRWEDVERMRILMKNSGLVKPPGFS 450
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + +WNS+I+ ++ G EA + F M+ + P+ + +C+ L L G++
Sbjct: 38 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 97
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H + D +++AL+ MY KCG+ AR FD EI + W +MI+GY +N
Sbjct: 98 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD--EISHRNIVSWTSMITGYVQN 155
Query: 230 GEYESAVEIFDLMQQE--------------------------------KVKPNSASFVAV 257
+ A+ +FD M + ++ N+ + AV
Sbjct: 156 DDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAV 215
Query: 258 LSACGHAG--HVDKAL--QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
L AC H+G + K + Q+ M GL+ ++D+ + G+++ AR+ +
Sbjct: 216 LLACAHSGSQRLGKCIHDQVIKM-----GLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGL 365
E V + +++ H ++ E+ M + ++P T +L+ +AGL
Sbjct: 271 REKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGL 325
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/384 (38%), Positives = 237/384 (61%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ +CA L+ G+QVHG K ++S+T++ +LV+MY+KC L AH V
Sbjct: 115 PDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ R+ ++WNT+I+G + G+ +A +FE + + +W +++SG++++G
Sbjct: 175 FEEMT-ERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTI----FSWTAIVSGYARIGC 229
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A + F +MQ G+ P + SVL ACA L AL+LGK H + +A ++ + A
Sbjct: 230 YADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNA 289
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG RR FDQ + D W+ MI G +G A+E+F MQ+ K++
Sbjct: 290 LIEMYAKCGSIDEGRRLFDQ--MNERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIE 347
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +LSAC HAG +++ L+ F M D+ ++P EH+GC+V+LLG SGRLD+A E
Sbjct: 348 PNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALE 407
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+++P +P +++ SLL +C H N ++ L E+EP + +V+LSN+YA LG+
Sbjct: 408 LIKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGK 467
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R+++ + + K PG S+
Sbjct: 468 WDGVSRMRKLMRSKSMKKTPGCSS 491
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 133/280 (47%), Gaps = 27/280 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ ACA L L+ G+ +H K + + AL++MY KCG +
Sbjct: 246 EPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRR 305
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R++++W+TMI G+ +GR+ +A+ELF+ + +P+ T+ ++S + G
Sbjct: 306 LFDQM-NERDVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEPNIITFVGLLSACAHAG 364
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADL-SALKLGKETHGHVIRADLNKD 182
+ E + FE M+ + P ++ C+ ++L L AL+L K + + D
Sbjct: 365 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIK-------KMPMKPD 417
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
++ +L+S A + E++P D + + + Y G+++ + L
Sbjct: 418 SAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKL 477
Query: 242 MQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
M+ + +K P +S VD +Q F DD
Sbjct: 478 MRSKSMKKTPGCSSI-----------EVDNMVQEFASGDD 506
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/384 (40%), Positives = 236/384 (61%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T +V+ ACAS+ L+ G+Q H +K+ +SD ++ TALV MY +CG L A +
Sbjct: 7 KPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGH 66
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R+ TWN MI G N +KA++LF +E + D +W ++I+G++Q G
Sbjct: 67 VFDKMS-ERSTRTWNAMITGHAQNRDMKKALKLF----YEMSERDVVSWTAVIAGYAQNG 121
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +F +M+ TGM + SVLSACADL+AL+LG++ H +V+++ D + +
Sbjct: 122 YGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGS 181
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K G A + FD+ + + WN++I+G ++G AV +F+ M Q +
Sbjct: 182 ALVDMYAKSGSMEDACQVFDKMPQR--NEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN SFV VLSAC H G V++ F +M ++G+ P H+ CM+DLLGR+G LDEA
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I +P EP VSV+ +LLGAC H N++L + +A L ME + +V+LSNIYA G
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAG 359
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+D ++R+++ DR + K PG S
Sbjct: 360 QWDDAAKVRKLMKDRGVMKQPGYS 383
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 32/223 (14%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G+ P+ +++V+ ACA +++L+ GK+ H ++I+ D + TAL+ MY +CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 199 PSWARRFFDQ-----------------------------FEIKPDDPAFWNAMISGYGRN 229
A FD+ +E+ D W A+I+GY +N
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQE 288
G + ++ +F+ M++ +K + +VLSAC ++ Q ++ F L
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+VD+ +SG +++A ++ ++P+ ++S++ C H
Sbjct: 181 --SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQH 221
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 223/384 (58%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS+T +SV+ ACA L L+ G+Q+HG ++ +S+ ++G ALV+MY KCG + A+
Sbjct: 319 KPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYK 378
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + K + WN++ISG+SQ G
Sbjct: 379 LFERMP------------------------------------KKNVVAWNAIISGYSQHG 402
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ+ G+ P + SVL ACA AL+ GK+ HG+ IR+ + + T
Sbjct: 403 HPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGT 462
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ +Y KCG + A++ F++ + D W MI YG +G E A+ +F MQ+
Sbjct: 463 GLVDIYAKCGNVNTAQKLFER--MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGT 520
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +F A+L+AC HAG VD+ LQ F M D+GL PK EH+ C+VDLLGR+G LDEA
Sbjct: 521 KLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEAN 580
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I+ + EP +V+ +LLGAC H N +LGE+ A L E++P+N +V+LSNIYA
Sbjct: 581 GIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQ 640
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV ++R+M+ ++ + K PG S
Sbjct: 641 RWEDVAKLRKMMKEKGVKKQPGCS 664
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/353 (30%), Positives = 175/353 (49%), Gaps = 44/353 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + F+SVI AC S LQ GR+VH + +SD ++GTAL MY KCG L A V
Sbjct: 118 PDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQV 177
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + K D +WN++I+G+SQ G
Sbjct: 178 FDRMP------------------------------------KRDVVSWNAIIAGYSQNGQ 201
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+EA LF +MQ G+ P+ + SV+ CA L AL+ GK+ H + IR+ + D +
Sbjct: 202 PYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNG 261
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KCG + A + F++ I+ D A WNA+I GY N ++ A+ F+ MQ +K
Sbjct: 262 LVNMYAKCGNVNTAHKLFERMPIR--DVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIK 319
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS + V+VL AC H +++ QI G + +V++ + G ++ A +
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRS-GFESNDVVGNALVNMYAKCGNVNSAYK 378
Query: 309 LIRELPEPTVSVYHSLLGAC--WCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
L +P+ V +++++ H + L + M+ Q ++P++ F I+S
Sbjct: 379 LFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS---FAIVS 428
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 9/254 (3%)
Query: 109 FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+ + W I G+ + G +A +L+ +MQ TG+ P SV+ AC S L+ G+
Sbjct: 81 IRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGR 140
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+ H +I D + TAL SMY KCG AR+ FD+ + D WNA+I+GY +
Sbjct: 141 KVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKR--DVVSWNAIIAGYSQ 198
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG+ A+ +F MQ +KPNS++ V+V+ C H +++ QI G++
Sbjct: 199 NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS-GIESDVL 257
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA----MKL 344
+V++ + G ++ A +L +P V+ +++++G LNS E +A M++
Sbjct: 258 VVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGG--YSLNSQHHEALAFFNRMQV 315
Query: 345 QEMEPENPTPFVIL 358
+ ++P + T +L
Sbjct: 316 RGIKPNSITMVSVL 329
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 235/384 (61%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ +CA L+ G+QVHG K ++S+T++ +LV+MY+KC L AH V
Sbjct: 115 PDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ R+ ++WNT+I+G + G+ +A +FE + + +W +++SG++++G
Sbjct: 175 FEEMT-ERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTI----FSWTAIVSGYARIGC 229
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A + F +MQ G+ P + SVL CA L AL+LGK H + +A ++ + A
Sbjct: 230 YADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNA 289
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG RR FDQ +K D W+ MI G +G A+E+F MQ+ K++
Sbjct: 290 LIEMYAKCGSIDQGRRLFDQ--MKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIE 347
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV +L+AC HAG +++ L+ F M D+ ++P EH+GC+V+LLG SGRLD+A E
Sbjct: 348 PSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALE 407
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++++P +P ++ SLL +C H N + L E+EP + +V+LSN+YA LG+
Sbjct: 408 LVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGK 467
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R+++ + + K PG S+
Sbjct: 468 WDGVSRMRKLMRSKSMKKTPGCSS 491
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 27/280 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ CA L L+ G+ +H K + + AL++MY KCG +
Sbjct: 246 EPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 305
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++K R++++W+TMI G+ +GR+ +A+ELF+ + +P T+ +++ + G
Sbjct: 306 LFDQMK-ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 364
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADL-SALKLGKETHGHVIRADLNKD 182
+ E + FE M+ + P ++ C+ ++L L AL+L K + D
Sbjct: 365 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVK-------KMPRKPD 417
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+S G A + E++P D + + + Y G+++ + L
Sbjct: 418 SPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKL 477
Query: 242 MQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
M+ + +K P +S VD +Q F DD
Sbjct: 478 MRSKSMKKTPGCSSI-----------EVDNMVQEFASGDD 506
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 235/414 (56%), Gaps = 38/414 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA---------------- 51
PN T+ ++ AC+ +Q GRQ+HG +K SD I +A
Sbjct: 129 RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARK 188
Query: 52 --------------LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
++D YLKCG L A +F ++ +NI +WN MI G+ G A
Sbjct: 189 MFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP-VKNIGSWNVMINGLAKGGNLGDA 247
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+LF+ ++ D +W+SM+ G+ G EA ++F++MQ P ++SVL+A
Sbjct: 248 RKLFDEMSER----DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAA 303
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
C+++ A+ G+ H ++ R + D + TAL+ MY KCG+ F+ E+K +
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE--EMKEREIF 361
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAMI G +G E A+E+F +Q+ ++KPN + V VL+AC HAG VDK L+IF M
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
+ +G+ P+ EH+GCMVDLLGRSG EA +LI +P +P +V+ +LLGAC H N DL
Sbjct: 422 REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDL 481
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E + L E+EP+N +V+LSNIYA +GR++DV +IR+++ DR + +PG+S
Sbjct: 482 AERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVS 535
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 157/404 (38%), Gaps = 109/404 (26%)
Query: 23 SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN------VFQELKGSR 76
S+ LQ+ Q+HGL L+ D + AL LKC P N VF +
Sbjct: 42 SITSLQYLTQLHGLVLRSGHFQDHYVSGAL----LKCYANPHFSNFDFALKVFSSIPNP- 96
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N+ WN +I G + N + KA+ + + + +P+ T+
Sbjct: 97 NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTY-------------------- 135
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM---- 192
P+L AC+ A++ G++ HGHV++ + D + +A I M
Sbjct: 136 ---------PTL------FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASF 180
Query: 193 --------------------------YMKCGQPSWARRFFDQFEIK-------------- 212
Y+KCG A+ F Q +K
Sbjct: 181 GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAK 240
Query: 213 ---------------PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
D W++M+ GY G Y+ A+EIF MQ+E+ +P +V
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
L+AC + G +D+ + + + +K ++D+ + GRLD E+ E+ E
Sbjct: 301 LAACSNIGAIDQGRWVHAYLKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ +++++G H ++ E+ KLQE M+P T +L+
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLT 403
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/414 (36%), Positives = 235/414 (56%), Gaps = 38/414 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA---------------- 51
PN T+ ++ AC+ +Q GRQ+HG +K SD I +A
Sbjct: 129 RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARK 188
Query: 52 --------------LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
++D YLKCG L A +F ++ +NI +WN MI G+ G A
Sbjct: 189 MFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMP-VKNIGSWNVMINGLAKGGNLGDA 247
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+LF+ ++ D +W+SM+ G+ G EA ++F++MQ P ++SVL+A
Sbjct: 248 RKLFDEMSER----DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAA 303
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
C+++ A+ G+ H ++ R + D + TAL+ MY KCG+ F+ E+K +
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE--EMKEREIF 361
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAMI G +G E A+E+F +Q+ ++KPN + V VL+AC HAG VDK L+IF M
Sbjct: 362 TWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
+ +G+ P+ EH+GCMVDLLGRSG EA +LI +P +P +V+ +LLGAC H N DL
Sbjct: 422 REFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDL 481
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E + L E+EP+N +V+LSNIYA +GR++DV +IR+++ +R + +PG+S
Sbjct: 482 AERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVS 535
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 156/404 (38%), Gaps = 109/404 (26%)
Query: 23 SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN------VFQELKGSR 76
S+ LQ+ Q+H L L+ D + AL LKC P N VF +
Sbjct: 42 SITSLQYLTQLHALVLRSGHFQDHYVSGAL----LKCYANPHFSNFDFALKVFSSIPNP- 96
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N+ WN +I G + N + KA+ + + + +P+ T+
Sbjct: 97 NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTY-------------------- 135
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM---- 192
P+L AC+ A++ G++ HGHV++ + D + +A I M
Sbjct: 136 ---------PTL------FKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASF 180
Query: 193 --------------------------YMKCGQPSWARRFFDQFEIK-------------- 212
Y+KCG A+ F Q +K
Sbjct: 181 GRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAK 240
Query: 213 ---------------PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
D W++M+ GY G Y+ A+EIF MQ+E+ +P +V
Sbjct: 241 GGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSV 300
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
L+AC + G +D+ + + + +K ++D+ + GRLD E+ E+ E
Sbjct: 301 LAACSNIGAIDQGRWVHAYLKRN-SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKERE 359
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ +++++G H ++ E+ KLQE M+P T +L+
Sbjct: 360 IFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLT 403
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 227/386 (58%), Gaps = 8/386 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PN T+ +I AC ++ G+Q+H LK +D L+ MY+ L A
Sbjct: 115 SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQA 174
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R++++W ++I G G +KA E+FE + + +WN+MI+ + Q
Sbjct: 175 RRVFDNMP-QRDVVSWTSLITGYSQWGFVDKAREVFELMPER----NSVSWNAMIAAYVQ 229
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
EAF LF++M+ +V S+LSAC L AL+ GK HG++ ++ + D +
Sbjct: 230 SNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL 289
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT +I MY KCG A F+ E+ + WN MI G +G+ E+A+E+F M++E
Sbjct: 290 ATTVIDMYCKCGCLEKASEVFN--ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 347
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ +FV VLSAC H+G V++ F M + GLKP EHFGCMVDLLGR+G L+E
Sbjct: 348 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 407
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR+LI E+P P V +L+GAC H N++LGE++ K+ E+EP N +V+L+N+YA
Sbjct: 408 ARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYAS 467
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV ++R+++NDR + K PG S
Sbjct: 468 AGRWEDVAKVRKLMNDRGVKKAPGFS 493
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 127/293 (43%), Gaps = 37/293 (12%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+G A+E+F+ + H PD +N++ G+ + + ++ +M + P+
Sbjct: 67 SGDLNYALEVFDKIPH----PDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFT 122
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-- 208
++ AC A++ GK+ H HV++ D LI MY+ ARR FD
Sbjct: 123 YPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMP 182
Query: 209 --------------------------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDL 241
FE+ P+ + WNAMI+ Y ++ A +FD
Sbjct: 183 QRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDR 242
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ E V + ++LSAC G +++ I ++ G++ + ++D+ + G
Sbjct: 243 MRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKCG 301
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
L++A E+ ELP+ +S ++ ++G H + E+ +EME E P
Sbjct: 302 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIEL---FKEMEREMVAP 351
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 237/450 (52%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +TF SV+ C + L+ GRQ+H L ++ Q D +G AL++MY++CG L A+
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE 643
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF L+ RN+++W MI G G KA ELF + ++GFKP +T+
Sbjct: 644 VFHSLR-HRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSA 702
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEK-------------- 138
N++IS +S+ G +A K+F+K
Sbjct: 703 CLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIA 762
Query: 139 -----------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
MQ G+V + S+L+AC+ SAL+ GK H +++ +
Sbjct: 763 GYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQG 822
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + ALISMY KCG A+ FD F K + WNAMI+ Y ++G A++ F+
Sbjct: 823 DVRVGAALISMYAKCGSLEEAQEVFDNFTEK--NVVTWNAMINAYAQHGLASKALDFFNC 880
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M +E +KP+ ++F ++LSAC H+G V + +IF+ ++ GL P EH+GC+V LLGR+G
Sbjct: 881 MDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAG 940
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
R EA LI ++P P +V+ +LLGAC H N L E A ++ NP +V+LSN
Sbjct: 941 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSN 1000
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA GRW+DV +IR+++ R + K PG S
Sbjct: 1001 VYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 160/317 (50%), Gaps = 39/317 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T++SV++AC++ L G +H ++ SD IG +L+ MY +CG LP A +F
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELF 443
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
NTM K D +WN++I+G+++ R
Sbjct: 444 ------------NTMP------------------------KRDLISWNAIIAGYARREDR 467
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KL+++MQS G+ P +LSAC + SA GK H ++R+ + + +A AL
Sbjct: 468 GEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANAL 527
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG A+ F+ + D WN+MI+G+ ++G YE+A ++F M++E ++P
Sbjct: 528 MNMYRRCGSIMEAQNVFEG--TRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEP 585
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F +VL C + ++ QI ++ + GL+ ++++ R G L +A E+
Sbjct: 586 DKITFASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEV 644
Query: 310 IRELPEPTVSVYHSLLG 326
L V + +++G
Sbjct: 645 FHSLRHRNVMSWTAMIG 661
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 176/377 (46%), Gaps = 40/377 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VTF+ ++SAC + G+ +H L+ +S+ + AL++MY +CG + A N
Sbjct: 483 KPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN 542
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + +R+I++WN+MIAG +G E A +LF + EG +PD T+
Sbjct: 543 VFEGTR-ARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITF----------- 590
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
SVL C + AL+LG++ H +I + L D ++
Sbjct: 591 ------------------------ASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY++CG A F ++ + W AMI G+ GE A E+F MQ +
Sbjct: 627 ALINMYIRCGSLQDAYEVFHS--LRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGF 684
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP ++F ++L AC + +D+ ++ + + G + ++ +SG + +AR
Sbjct: 685 KPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALISAYSKSGSMTDAR 743
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLG 366
++ ++P + ++ ++ + + A ++QE N FV + N +
Sbjct: 744 KVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFS 803
Query: 367 RWEDVGRIRQMINDRQL 383
E+ R+ I R++
Sbjct: 804 ALEEGKRVHAEIVKRKM 820
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 166/347 (47%), Gaps = 44/347 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T+IS+++AC S L++G+++H ++ Q D + +L++MY KC LP A V
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++NTM+ E+ + LF ++ EG PD T+ +++ F+
Sbjct: 241 FSGIY-RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFT---- 295
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
PS+ L GK H + LN D + TA
Sbjct: 296 ----------------TPSM---------------LDEGKRIHKLAVNEGLNSDIRVGTA 324
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L +M+++CG + A++ + F + D +NA+I+ ++G YE A E + M+ + V
Sbjct: 325 LATMFVRCGDVAGAKQALEAFADR--DVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVV 382
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N ++++VL+AC + + I + + + G + ++ + R G L ARE
Sbjct: 383 MNRTTYLSVLNACSTSKALGAGELIHSHI-SEVGHSSDVQIGNSLISMYARCGDLPRARE 441
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTP 354
L +P+ + +++++ D GE AMKL ++M+ E P
Sbjct: 442 LFNTMPKRDLISWNAIIAG--YARREDRGE--AMKLYKQMQSEGVKP 484
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 47/355 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT+I+++ A + L G+++H L + SD +GTAL M+++CG
Sbjct: 282 PDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCG-------- 333
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+AG +++A+E F D +N++I+ +Q G
Sbjct: 334 ---------------DVAG------AKQALEAFA-------DRDVVVYNALIAALAQHGH 365
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+ + +M+S G+V + SVL+AC+ AL G+ H H+ + D + +
Sbjct: 366 YEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNS 425
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY +CG AR F+ + D WNA+I+GY R + A++++ MQ E VK
Sbjct: 426 LISMYARCGDLPRARELFNTMPKR--DLISWNAIIAGYARREDRGEAMKLYKQMQSEGVK 483
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQEHFGCMVDLLGRSGRLDE 305
P +F+ +LSAC ++ A M+ +D G+K ++++ R G + E
Sbjct: 484 PGRVTFLHLLSACTNS----SAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE--MAMKLQEMEPENPTPFVIL 358
A+ + + ++S++ H + + + + MK + +EP+ T +L
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVL 594
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 143/324 (44%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N ++ ++ C L +++H ++ D + L++MY+KC + AH
Sbjct: 79 ETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQ 138
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ + D +WNS+IS ++Q G
Sbjct: 139 VFLKMP------------------------------------RRDVISWNSLISCYAQQG 162
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +AF+LFE+MQ+ G +PS S+L+AC + L+ GK+ H +I A +D +
Sbjct: 163 FKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQN 222
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L++MY KC AR+ F I D +N M+ Y + E + +F M E +
Sbjct: 223 SLLNMYGKCEDLPSARQVFSG--IYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI 280
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +++ +L A +D+ +I + ++ GL + + R G + A+
Sbjct: 281 PPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE-GLNSDIRVGTALATMFVRCGDVAGAK 339
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ + + V VY++L+ A H
Sbjct: 340 QALEAFADRDVVVYNALIAALAQH 363
>gi|255551084|ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544410|gb|EEF45931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 226/383 (59%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ ACA L G+QVH K K+S + AL+DMY KC L AHN+
Sbjct: 93 PDEFTFPFVVKACARLGLHNLGKQVHAQFFKFGKKSHLITENALIDMYTKCDNLLDAHNL 152
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R ++WN +I+G + G+ +A LF+ + + +W ++ISG++++G
Sbjct: 153 FDEMH-ERGAISWNGIISGHVRLGQMRRARALFDEMPNRTI----VSWTAIISGYTRIGS 207
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F +MQ G+ P + SVL ACA L AL+ GK H R L + + A
Sbjct: 208 YIDALDVFREMQIAGIEPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNA 267
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A + FDQ ++ D W+ MI G +G+ A+ IF+ M+Q +K
Sbjct: 268 LIEMYTKCGCIDQACQLFDQ--MRGRDVISWSTMIGGLANHGKVREAIAIFERMKQTNIK 325
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +LSAC HAG ++ L F M DF ++P+ EH+G +VDLLGR+GRL +A +
Sbjct: 326 PNGITFVGLLSACAHAGFWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALD 385
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++ ++P +P ++ SLL +C H N ++ L+E+EP++ +V+LSNIYA LG+
Sbjct: 386 IVEKMPMKPDSKIWGSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGK 445
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV R+R+++ +++ K PG S
Sbjct: 446 WDDVSRMRKLVRSKRMKKTPGCS 468
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 141/310 (45%), Gaps = 20/310 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ + ISV+ ACA L L+ G+ +H + T I AL++MY KCGC+ A
Sbjct: 224 EPDEASIISVLPACAKLGALETGKWIHMFCARNGLLRRTCICNALIEMYTKCGCIDQACQ 283
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +++G R++++W+TMI G+ +G+ +A+ +FE + KP+ T+ ++S + G
Sbjct: 284 LFDQMRG-RDVISWSTMIGGLANHGKVREAIAIFERMKQTNIKPNGITFVGLLSACAHAG 342
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
E F+ M+ + P ++ S++ L + V + + D +
Sbjct: 343 FWEEGLMYFDTMKKDFHIEPEIEHYGSLVDLLGRAGRLSQALDI---VEKMPMKPDSKIW 399
Query: 187 TALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+L+S A + E++PDD + + + Y G+++ + L++ +
Sbjct: 400 GSLLSSCRTHCNIEVAVIAMEHLEELEPDDTGNYVLLSNIYADLGKWDDVSRMRKLVRSK 459
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++K + V+ Q F DD KP + +++LL +D
Sbjct: 460 RMKKTPGCSLI---------EVNNVAQEFVSGDDS---KPYSKEIFWLLELLAFHQDMD- 506
Query: 306 ARELIRELPE 315
+ ++ +PE
Sbjct: 507 -KHILEIIPE 515
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 227/387 (58%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF +V+++C S L GRQ+H L +K+ + +G++L+DMY K
Sbjct: 362 EPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAK--------- 412
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+G+ +A +FE L D + ++ISG++QLG
Sbjct: 413 -----------------------DGKIHEARTVFECLPER----DVVSCTAIISGYAQLG 445
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LF ++Q GM + T VL+A + L+AL LGK+ H HV+R+++ +
Sbjct: 446 LDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQN 505
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-K 246
+LI MY KCG +++RR FD + WNAM+ GY ++GE +++F LM++E K
Sbjct: 506 SLIDMYSKCGNLTYSRRIFDT--MYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETK 563
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S + +AVLS C H G DK L IF M ++PK EH+GC+VDLLGRSGR++E
Sbjct: 564 VKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEE 623
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E I+++P EPT +++ SLLGAC H N D+GE +L E+EP N +VILSN+YA
Sbjct: 624 AFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYAS 683
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRWEDV +R ++ + +TK PG S+
Sbjct: 684 AGRWEDVSSLRDLMLKKTVTKEPGRSS 710
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 142/339 (41%), Gaps = 70/339 (20%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ ++++ C + + G++VH +K + T L+ +Y KC L AHNVF E+
Sbjct: 245 NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEM 304
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+++W +MIS +SQ G +A
Sbjct: 305 P-ERNVVSWT-----------------------------------AMISAYSQRGYASQA 328
Query: 133 FKLF---EKMQSTGMV------------------PSLKCVTSVLSACADLSALKLGKETH 171
LF K+ TG+ P+ +VL++C LG++ H
Sbjct: 329 LNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIH 388
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNG 230
+I+ + + ++L+ MY K G+ AR FE P+ D A+ISGY + G
Sbjct: 389 SLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTV---FECLPERDVVSCTAIISGYAQLG 445
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
E A+E+F +Q E +K N ++ VL+A +D Q+ + L+ + F
Sbjct: 446 LDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHV-----LRSEIPSF 500
Query: 291 ----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ + G L +R + + E TV ++++L
Sbjct: 501 VVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAML 539
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 232/386 (60%), Gaps = 11/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P S TF +++ AC++ L + GRQVH T+ I SD +G L+DMY+KCGCL C H
Sbjct: 137 PVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHR 196
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++W ++I G E A ELF+GL + D W +M++G++Q
Sbjct: 197 VFDEML-DRDVISWTSLIVAYAKVGNMEAASELFDGLPMK----DMVAWTAMVTGYAQNA 251
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-- 185
EA ++FE+MQ+ G+ + V+SACA L A K ++ ++
Sbjct: 252 RPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVV 311
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ALI MY KCG A + F++ E + + +++MI G+ +G +A+E+FD M +
Sbjct: 312 GSALIDMYAKCGSVEDAYKVFERMEER--NVYSYSSMIVGFAMHGLAGAAMELFDEMLKT 369
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++KPN +F+ VL+AC HAG V++ Q+F MM++ G+ P ++H+ CMVDLLGR+GRL+E
Sbjct: 370 EIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEE 429
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A L++ +P P V+ +LLGAC H N D+ + A L E+EP +++LSNIYA
Sbjct: 430 ALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYAS 489
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV ++R+++ + L K PG S
Sbjct: 490 AGRWDDVSKVRKLMRAKGLKKNPGCS 515
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 31/246 (12%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+P W ++I G++ G E+ L+ M+ G+ P T++L AC+ + LG++
Sbjct: 102 PNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQV 161
Query: 171 HGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H I D + LI MY+KCG R FD+
Sbjct: 162 HTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGN 221
Query: 209 -------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
F+ P D W AM++GY +N A+E+F+ MQ VK + + V V+SA
Sbjct: 222 MEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISA 281
Query: 261 CGHAGHVDKALQIFTMMDDD-FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G A + + + FG ++D+ + G +++A ++ + E V
Sbjct: 282 CAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVY 341
Query: 320 VYHSLL 325
Y S++
Sbjct: 342 SYSSMI 347
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 7/179 (3%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP--SWARRFFDQ 208
+ SVL C ++ +K + H H+ R L + + L+ K P + R F Q
Sbjct: 42 LVSVLHGCTHINQVK---QVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQ 98
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
E +P W A+I GY G + +V +++ M+++ + P S +F A+L AC A V+
Sbjct: 99 VEYP--NPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVN 156
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
Q+ T G ++D+ + G L + E+ + V + SL+ A
Sbjct: 157 LGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 239/450 (53%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+++TF SV+S C + L+ G+Q+HG + Q D +G AL++MY++CG L A N
Sbjct: 529 EPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARN 588
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF L+ R++++W MI G G KA+ELF + +EGF+P +T+
Sbjct: 589 VFHSLQ-HRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSA 647
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEK-------------- 138
N++IS +S+ G +A ++F+K
Sbjct: 648 CLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIA 707
Query: 139 -----------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
MQ +VP+ S+L+AC+ SAL+ GK H +++ L
Sbjct: 708 GYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQG 767
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + ALISMY KCG A+ FD I + WNAMI+ Y ++G A+ F+
Sbjct: 768 DVRVGAALISMYAKCGSQGEAQEVFDN--IIEKNVVTWNAMINAYAQHGLASKALGFFNC 825
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++E +KP+ ++F ++LSAC HAG V + QIF+ M+ ++G+ P EH+GC+V LLGR+
Sbjct: 826 MEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRAR 885
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
R EA LI ++P P +V+ +LLGAC H N L E A ++ NP +++LSN
Sbjct: 886 RFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSN 945
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA GRW+DV +IR+++ R + K PG S
Sbjct: 946 VYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 171/331 (51%), Gaps = 44/331 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T++S+++AC++ L+ G+ +H + SD IG AL+ MY +CG LP
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP------ 382
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
KA ELF + K D +WN++I+G+++ R
Sbjct: 383 --------------------------KARELFYTMP----KRDLISWNAIIAGYARREDR 412
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +L+++MQS G+ P +LSACA+ SA GK H ++R+ + + +A AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG A+ F+ + + D WN+MI+G+ ++G YE+A ++F MQ E+++P
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQAR--DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ +F +VLS C + ++ QI + + GL+ ++++ R G L +AR +
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
L V + +++G C +D GE+M
Sbjct: 590 FHSLQHRDVMSWTAMIGGC-----ADQGEDM 615
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 179/380 (47%), Gaps = 46/380 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VTF+ ++SACA+ G+ +H L+ +S+ + AL++MY +CG L A N
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + D +WNSMI+G +Q G
Sbjct: 488 VFEGTQAR------------------------------------DVISWNSMIAGHAQHG 511
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A+KLF++MQ+ + P SVLS C + AL+LGK+ HG + + L D ++
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY++CG AR F + + D W AMI G GE A+E+F MQ E
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P ++F ++L C + +D+ ++ + + G + ++ +SG + +AR
Sbjct: 630 RPVKSTFSSILKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAR 688
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGE---EMAMKLQEME-PENPTPFVILSNIYA 363
E+ ++P + ++ ++ + + LG+ E A ++QE + N FV L N +
Sbjct: 689 EVFDKMPSRDIVSWNKIIAG---YAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACS 745
Query: 364 GLGRWEDVGRIRQMINDRQL 383
E+ R+ I R+L
Sbjct: 746 SFSALEEGKRVHAEIVKRKL 765
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 56/373 (15%)
Query: 1 MKECL------SDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA 51
+KECL S E P+ VT+I+++ A + L G+++H LT++ SD +GTA
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
LV M ++CG + + A + F+G A
Sbjct: 270 LVTMCVRCGDV--------------------------------DSAKQAFKGTADR---- 293
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +N++I+ +Q G EAF+ + +M+S G+ + S+L+AC+ AL+ GK H
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H+ + D + ALISMY +CG AR F + + D WNA+I+GY R +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELF--YTMPKRDLISWNAIIAGYARRED 411
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQE 288
A+ ++ MQ E VKP +F+ +LSAC ++ A M+ +D G+K
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS----SAYADGKMIHEDILRSGIKSNGH 467
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--E 346
++++ R G L EA+ + V ++S++ H + + ++ ++Q E
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEE 527
Query: 347 MEPENPTPFVILS 359
+EP+N T +LS
Sbjct: 528 LEPDNITFASVLS 540
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 150/324 (46%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E T+++++ C L +++H ++ D + L++MY+KC + AH
Sbjct: 24 ETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ + D +WNS+IS ++Q G
Sbjct: 84 VFKEMP------------------------------------RRDVISWNSLISCYAQQG 107
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +AF+LFE+MQ+ G +P+ S+L+AC + L+ GK+ H +I+A +D +
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+SMY KCG AR+ F I P D +N M+ Y + + + +F M E +
Sbjct: 168 SLLSMYGKCGDLPRARQVFAG--ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +++ +L A +D+ +I + ++ GL +V + R G +D A+
Sbjct: 226 SPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAK 284
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ + + V VY++L+ A H
Sbjct: 285 QAFKGTADRDVVVYNALIAALAQH 308
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 243/386 (62%), Gaps = 11/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + S++S+C SL Q GR++H ++ + + ++ LVDMY KCG + A
Sbjct: 577 KPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWK 636
Query: 68 VF-QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
V+ Q +K ++++ N M++ + +GR+ A LF+ + + A WNS+++G++
Sbjct: 637 VYDQTIK--KDVILNNVMVSAFVNSGRANDAKNLFDQMEQR----NTALWNSILAGYANK 690
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESM 185
G++ E+F F +M + + + + ++++ C+ L AL+ G + H +I+ +N +
Sbjct: 691 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL+ MY KCG + AR FD K + WNAMISGY ++G + A+ +++ M ++
Sbjct: 751 ETALVDMYSKCGAITKARTVFDNMNGK--NIVSWNAMISGYSKHGCSKEALILYEEMPKK 808
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ PN +F+A+LSAC H G V++ L+IFT M +D+ ++ K EH+ CMVDLLGR+GRL++
Sbjct: 809 GMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLED 868
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+E + ++P EP VS + +LLGAC H + D+G A +L E++P+NP P+VI+SNIYA
Sbjct: 869 AKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAA 928
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW++V IRQM+ + + K PG+S
Sbjct: 929 AGRWKEVEDIRQMMKMKGVKKDPGVS 954
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 178/364 (48%), Gaps = 51/364 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N S++ A A L + GR++HG ++ SD ++G+ALVDMY KCG + AH
Sbjct: 374 KSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQ 433
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQL 126
VF+ L RN +++N ++AG + G++E+A+EL+ + E G +PD T+
Sbjct: 434 VFRSLL-ERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTF---------- 482
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
T++L+ CA+ G++ H H+IRA++ K+ +
Sbjct: 483 -------------------------TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 517
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+ MY +CG+ ++A+ F++ + + WN+MI GY +NGE + A+ +F MQ
Sbjct: 518 TELVHMYSECGRLNYAKEIFNR--MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 575
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG----CMVDLLGRSGR 302
+KP+ S ++LS+C K ++ +F ++ E G +VD+ + G
Sbjct: 576 IKPDCFSLSSMLSSCVSLSDSQKGREL-----HNFIVRNTMEEEGILQVVLVDMYAKCGS 630
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+D A ++ + + V + + ++ A +NS + +ME N + + Y
Sbjct: 631 MDYAWKVYDQTIKKDVILNNVMVSA---FVNSGRANDAKNLFDQMEQRNTALWNSILAGY 687
Query: 363 AGLG 366
A G
Sbjct: 688 ANKG 691
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 46/321 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF S + C +L G+QVH + + DT +G AL+DMY KC V
Sbjct: 274 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 333
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ G RN TWNS+IS +Q G
Sbjct: 334 FDEM-GERN-----------------------------------QVTWNSIISAEAQFGH 357
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LF +MQ +G + + S+L A A L+ + G+E HGH++R LN D + +A
Sbjct: 358 FNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSA 417
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-V 247
L+ MY KCG A + F + + +NA+++GY + G+ E A+E++ MQ E +
Sbjct: 418 LVDMYSKCGMVEEAHQVFRS--LLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGI 475
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM---DDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+P+ +F +L+ C + + ++ QI + + + + E +V + GRL+
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE----LVHMYSECGRLN 531
Query: 305 EARELIRELPEPTVSVYHSLL 325
A+E+ + E ++S++
Sbjct: 532 YAKEIFNRMAERNAYSWNSMI 552
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 169/362 (46%), Gaps = 25/362 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF ++++ CA+ GRQ+H ++ + ++ T LV MY +CG L A
Sbjct: 476 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 535
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF---- 123
+F + RN +WN+MI G NG +++A+ LF+ + G KPD + +SM+S
Sbjct: 536 IFNRM-AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594
Query: 124 -SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNK 181
SQ G F + M+ G++ + + + + C + A K+ +T + K
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVV--LVDMYAKCGSMDYAWKVYDQT--------IKK 644
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + ++S ++ G+ + A+ FDQ E + + A WN++++GY G + + F
Sbjct: 645 DVILNNVMVSAFVNSGRANDAKNLFDQMEQR--NTALWNSILAGYANKGLKKESFNHFLE 702
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M + ++ + + V +++ C ++ Q+ +++ + +VD+ + G
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSD----LGEEMAMKLQEMEPENPTPFVI 357
+ +AR + + + +++++ H S L EEM K M P T I
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKK--GMYPNEVTFLAI 820
Query: 358 LS 359
LS
Sbjct: 821 LS 822
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 167/428 (39%), Gaps = 83/428 (19%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP-- 63
+ + N + + S+I C Q G+ +H + D + T ++ +Y + GCL
Sbjct: 66 ASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 64 -CAHNVFQELKGSRNILTWNTMIAG----------MMLNGR-------SEK--------- 96
A +F+E+ RN+ WNTMI + L GR S+K
Sbjct: 126 CYARKLFEEMP-ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKA 184
Query: 97 --AME--------------------------LFEGLAHEGFKPDPAT------------W 116
AME L +G A G+ D T W
Sbjct: 185 CIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTW 244
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N++I+G+ ++ EA+ +F++M G+ P S L C L + GK+ H +I
Sbjct: 245 NAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D + ALI MY KC + FD E+ + WN++IS + G + A+
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDDEESCLKVFD--EMGERNQVTWNSIISAEAQFGHFNDAL 362
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFG 291
+F MQ+ K N + ++L A + K ++ +++ D L
Sbjct: 363 VLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGS------ 416
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+VD+ + G ++EA ++ R L E Y++LL ++ E+ +Q +
Sbjct: 417 ALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQ 476
Query: 352 PTPFVILS 359
P F +
Sbjct: 477 PDQFTFTT 484
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/402 (36%), Positives = 234/402 (58%), Gaps = 22/402 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ V+ ++V+ ACAS+ G+ VHG+ ++ D +G ALVDMY KCG + A
Sbjct: 10 RPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASK 69
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K +++++WN M+ G GR E A+ LFE + E + + +W+++I+ F+Q G
Sbjct: 70 VFDRIK-EKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRG 128
Query: 128 MRFEAFKLFEKMQ----------------STGMV-PSLKCVTSVLSACADLSALKLGKET 170
+ E +F +MQ G+V P+ ++ L ACA L+AL+LG++
Sbjct: 129 LGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQI 188
Query: 171 HGHVIRADLNKD-ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H +++R + +A LI MY K G AR FD +K + W ++++GYG +
Sbjct: 189 HAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDN--LKQKNFVSWTSLMTGYGMH 246
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G + A+E+FD M++ ++P+ + + VL AC H+G +D+ ++ F M +FG+ P QEH
Sbjct: 247 GRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEH 306
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CMVDLLGR+GRL+EA ELI + EP+ V+ +LL C H N +LGE A +L E+
Sbjct: 307 YACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSGCRIHANVELGEHAAKQLLELN 366
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
EN + +LSNIYA RW+DV R+R ++ + + K PG S
Sbjct: 367 SENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRPGCS 408
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 119/275 (43%), Gaps = 56/275 (20%)
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
K+ M P + + +VL ACA + A GK HG +R+ +D + AL+ MY KCG
Sbjct: 3 KLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCG 62
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
A + FD+ IK D WNAM++GY + G +E A+ +F+ M++E ++ N S+ AV
Sbjct: 63 MVDEASKVFDR--IKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAV 120
Query: 258 LSACGHA---------------GHVDKALQIFTMMDDDFGL-KPK--------------- 286
++A G + AL++F+ M GL KP
Sbjct: 121 IAAFAQRGLGCETLDVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLA 180
Query: 287 -------------QEHF--------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ HF C++D+ +SG +D AR + L + + SL+
Sbjct: 181 ALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLM 240
Query: 326 GACWCHLNSDLGEEM--AMKLQEMEPENPTPFVIL 358
H E+ M+ ++P+ T V+L
Sbjct: 241 TGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVL 275
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 220/384 (57%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T V+ AC+ LL ++ G+ VHG K+ QS+ + +V +Y CG + A V
Sbjct: 111 PDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKV 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+++TWN MIA ++ G +E A +LF + + +W SMI G++Q G
Sbjct: 171 FDKMP-QRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR----SWTSMIGGYAQCGK 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M+ G++P+ V +VL ACAD+ L LG+ H R+ K+ +
Sbjct: 226 SKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNT 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG A R FD E + W+AMI+G +G E A+ +F+ M VK
Sbjct: 286 LIDMYVKCGCLEDACRIFDNMEERT--VVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN+ +F+ +L AC H G V+K + F M D+G+ P+ EH+GCMVDL R+G L EA E
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P P V+ +LLG C H N L EE L +++P N +V+LSNIYA GR
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGR 463
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WEDV R+R+++ DR + K PG S+
Sbjct: 464 WEDVARVRKLMRDRGVKKTPGWSS 487
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+ + F++ +A LF +++ + P + VL AC+ L ++ GK HG+V
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQF-------------------------- 209
+ L + + ++ +Y CG+ AR+ FD+
Sbjct: 141 KLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYK 200
Query: 210 ---EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
E+ + W +MI GY + G+ + A+++F M+ + PN + VAVL AC G+
Sbjct: 201 LFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGN 260
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ +I + G + ++D+ + G L++A + + E TV + +++
Sbjct: 261 LVLGRRIHDFSNRS-GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319
Query: 327 ACWCH 331
H
Sbjct: 320 GLAAH 324
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQV-------HGLTLKIEKQSDTMIGTALVDMYLKCG 60
+PN+VTFI ++ AC+ + ++ GR+ +G+ +IE +VD++ + G
Sbjct: 343 KPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG------CMVDLFSRAG 396
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
L AH + + N + W ++ G + K ++L E K DP
Sbjct: 397 LLQEAHEFIMNMPIAPNGVVWGALLGGC----KVHKNIKLAEEATRHLSKLDP 445
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 227/387 (58%), Gaps = 43/387 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF +V+++C L G+Q+HGL +K S +G++L+DMY K G +
Sbjct: 149 KPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI----- 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E+A E+FE L D + ++I+G++QLG
Sbjct: 204 ---------------------------EEAREIFECLPER----DVVSCTAIIAGYAQLG 232
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA ++F+++QS GM P+ S+L+A + L+ L GK+ H HV+R +L +
Sbjct: 233 LDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 292
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG S+A+R FD P+ A WNAM+ GY ++G +E+F LM+ EK
Sbjct: 293 SLIDMYSKCGNLSYAQRLFDNM---PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 349
Query: 247 -VKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP++ + +AVLS C H D L I+ M+ ++G+KP EH+GC+VD+LGR+GR+D
Sbjct: 350 RVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRID 409
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA E I+ +P +PT V SLLGAC HL+ D+GE + +L E+EPEN +VILSN+YA
Sbjct: 410 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYA 469
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV +R M+ + +TK PG S
Sbjct: 470 SAGRWEDVNNVRAMMMQKAVTKEPGRS 496
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 19/269 (7%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L H F P + SQL + +M G C ++L+AC D A
Sbjct: 7 LIHRSFSSSPNSVLQTFRPISQLCSNGRLQEALLEMVMLGPEIGFHCYDALLNACLDKRA 66
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L+ G+ H H+I+ + T L+ Y KC AR+ D E+ + W AMI
Sbjct: 67 LREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD--EMPEKNVVSWTAMI 124
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
S Y + G A+ +F M + KPN +F VL++C A + QI GL
Sbjct: 125 SRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQI-------HGL 177
Query: 284 KPK---QEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
K H ++D+ ++G+++EARE+ LPE V V + + A + L D
Sbjct: 178 IVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDV-VSCTAIIAGYAQLGLD-- 234
Query: 338 EEMAMKLQEMEPENPTP-FVILSNIYAGL 365
EE Q ++ E P +V +++ L
Sbjct: 235 EEALEMFQRLQSEGMRPNYVTYASLLTAL 263
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 229/386 (59%), Gaps = 43/386 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +V+++C S Q GRQ+H L +K +S +G++L+DMY K G + C
Sbjct: 109 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKI-C---- 163
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+A +F+GL D + ++ISG++QLG+
Sbjct: 164 ---------------------------EARRVFDGLPER----DVVSCTAIISGYAQLGL 192
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++Q GM + SVL+A + L+AL G++ H HV+RA L + +
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE-K 246
LI MY KCG +++RR FD P+ WNAM+ GY ++G AVE+F LM++E K
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSM---PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 309
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S +F+AVLS C H G D+ L+IF M++ G +P+ EH+GC+VDL GR+GR++E
Sbjct: 310 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 369
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E I+++P EPT +++ SLLGAC H N +GE +A +L E+E EN +VILSN+YA
Sbjct: 370 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 429
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV +R+++ ++ + K PG S
Sbjct: 430 AGRWDDVRTVRELMKEKAVIKEPGRS 455
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV++ C S ++ G++VH +K + + T L+ +Y KC CL A V E+
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+++W +MISG+SQ G EA
Sbjct: 73 -ERNVVSWT-----------------------------------AMISGYSQRGYASEAL 96
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF +M +G P+ +VL++C S +LG++ H VI+ + ++L+ MY
Sbjct: 97 HLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMY 156
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
K G+ ARR FD + D A+ISGY + G E A+++F +Q+E ++ N +
Sbjct: 157 AKAGKICEARRVFDG--LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVT 214
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEAREL 309
+ +VL+A +D Q+ + + L+ K + ++D+ + G L +R +
Sbjct: 215 YASVLTALSGLAALDHGRQVHSHV-----LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+PE TV ++++L H LG E + M+ EN
Sbjct: 270 FDSMPERTVISWNAMLVGYSKH---GLGREAVELFKLMKEEN 308
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/387 (39%), Positives = 226/387 (58%), Gaps = 12/387 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +S +SAC +L L+ G+++H ++ + +IG AL+DMY KCGCL A V
Sbjct: 237 PDEATVVSTLSACTALKRLELGKKIHHY-VRDNVKFTPIIGNALLDMYCKCGCLSIARAV 295
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ S+N++ W TM++G G E+A ELFEG D W +MI+G+ Q
Sbjct: 296 FEEMP-SKNVICWTTMVSGYANCGELEEARELFEGSPIR----DVVIWTAMINGYVQFNR 350
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ + P V S+L+ CA A++ GK H + + D + TA
Sbjct: 351 FDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTA 410
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F +K D A W ++I G NG+ A+E+F M+Q V+
Sbjct: 411 LIEMYAKCGFIEKALEIFYGLRVK--DTASWTSIICGLAMNGKTSKALELFSKMKQAGVR 468
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC H G V++ + F M ++ +KPK EH+GC+VDLLGR+G L+EA E
Sbjct: 469 PDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEE 528
Query: 309 LIRELPEP----TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
LI+++P+ TV +Y SLL AC + N ++GE +A +L + E + + +L+NIYA
Sbjct: 529 LIKKIPDENKAITVPLYGSLLSACRIYGNVEMGERVAKQLVKFESSDSSVHTLLANIYAF 588
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
RWEDV ++R+ + D + K PG S+
Sbjct: 589 ADRWEDVTKVRRKMKDLGVKKTPGCSS 615
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 163/386 (42%), Gaps = 76/386 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V A L + ++ GL K + DT + +L+DMY + +
Sbjct: 135 PDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMYAQLALTDVMKML 194
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQLG 127
F E+ R++++WN MI+G + R E A+ +F + E G PD AT
Sbjct: 195 FDEMP-DRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEAT------------ 241
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSAC L L+LGK+ H H +R ++ +
Sbjct: 242 -----------------------VVSTLSACTALKRLELGKKIH-HYVRDNVKFTPIIGN 277
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKP-DDPAF 218
AL+ MY KCG S AR F++ FE P D
Sbjct: 278 ALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVI 337
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + ++ AV +F MQ KVKP+ V++L+ C G +++ I +D
Sbjct: 338 WTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFID 397
Query: 279 DDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
++ P G ++++ + G +++A E+ L + + S++ C +N
Sbjct: 398 EN--RIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSII--CGLAMNGKTS 453
Query: 338 EEM----AMKLQEMEPENPTPFVILS 359
+ + MK + P++ T +LS
Sbjct: 454 KALELFSKMKQAGVRPDDITFIGVLS 479
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 27/312 (8%)
Query: 76 RNILTWNTMIAGMM--LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
++I++ N ++A NG A ++F+ + + P +N +I F++ G
Sbjct: 67 QDIVSLNKLMAFCTDPFNGNLNYAEKMFKYIRY----PCLLIYNLIIKAFAKKGNYKRTL 122
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF K++ G+ P V A L + ++ G V + L D + +LI MY
Sbjct: 123 VLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTYVRNSLIDMY 182
Query: 194 MKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNS 251
+ + FD+ PD D WN MISGY + +E A+ +F MQ+E + P+
Sbjct: 183 AQLALTDVMKMLFDEM---PDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDE 239
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A+ V+ LSAC ++ +I + D+ P + ++D+ + G L AR +
Sbjct: 240 ATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPIIGN--ALLDMYCKCGCLSIARAVFE 297
Query: 312 ELPEPTVSVYHSLLGACWCHLNS---DLGE-EMAMKLQEMEP-ENPTPFVILSNIYAGLG 366
E+P V CW + S + GE E A +L E P + + + N Y
Sbjct: 298 EMPSKNV--------ICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAMINGYVQFN 349
Query: 367 RW-EDVGRIRQM 377
R+ E V R+M
Sbjct: 350 RFDEAVALFREM 361
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +S+++ CA ++ G+ +H + D ++GTAL++MY KCG + A
Sbjct: 367 KPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALE 426
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L+ ++ +W ++I G+ +NG++ KA+ELF + G +PD T+ ++S S G
Sbjct: 427 IFYGLR-VKDTASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGG 485
Query: 128 MRFEAFKLFEKMQ 140
+ E K F M+
Sbjct: 486 LVEEGRKFFNSMR 498
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 280 bits (716), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 229/386 (59%), Gaps = 43/386 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +V+++C S Q GRQ+H L +K +S +G++L+DMY K G + C
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKI-C---- 630
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+A +F+GL D + ++ISG++QLG+
Sbjct: 631 ---------------------------EARRVFDGLPER----DVVSCTAIISGYAQLGL 659
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++Q GM + SVL+A + L+AL G++ H HV+RA L + +
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE-K 246
LI MY KCG +++RR FD P+ WNAM+ GY ++G AVE+F LM++E K
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSM---PERTVISWNAMLVGYSKHGLGREAVELFKLMKEENK 776
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S +F+AVLS C H G D+ L+IF M++ G +P+ EH+GC+VDL GR+GR++E
Sbjct: 777 VKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEE 836
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E I+++P EPT +++ SLLGAC H N +GE +A +L E+E EN +VILSN+YA
Sbjct: 837 AFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYAS 896
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV +R+++ ++ + K PG S
Sbjct: 897 AGRWDDVRTVRELMKEKAVIKEPGRS 922
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 156/342 (45%), Gaps = 50/342 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV++ C S ++ G++VH +K + + T L+ +Y KC CL A V E+
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+++W +MISG+SQ G EA
Sbjct: 540 -ERNVVSWT-----------------------------------AMISGYSQRGYASEAL 563
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF +M +G P+ +VL++C S +LG++ H VI+ + ++L+ MY
Sbjct: 564 HLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMY 623
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
K G+ ARR FD + D A+ISGY + G E A+++F +Q+E ++ N +
Sbjct: 624 AKAGKICEARRVFDG--LPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVT 681
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEAREL 309
+ +VL+A +D Q+ + + L+ K + ++D+ + G L +R +
Sbjct: 682 YASVLTALSGLAALDHGRQVHSHV-----LRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 736
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+PE TV ++++L H LG E + M+ EN
Sbjct: 737 FDSMPERTVISWNAMLVGYSKH---GLGREAVELFKLMKEEN 775
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 11/185 (5%)
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+M G+ + SVL+ C +A++ G+ H H+I+ + T LI +Y KC
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
ARR D E+ + W AMISGY + G A+ +F M PN +F V
Sbjct: 527 CLGDARRVLD--EMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATV 584
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIREL 313
L++C + QI +++ +K E ++D+ ++G++ EAR + L
Sbjct: 585 LTSCTSSSGFQLGRQIHSLV-----IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGL 639
Query: 314 PEPTV 318
PE V
Sbjct: 640 PERDV 644
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/390 (38%), Positives = 234/390 (60%), Gaps = 15/390 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI-GTALVDMYLKCGCLPCAHN 67
P+ VT SV+SACA L + GRQVH +K ++ D M+ ALVDMY KCG A
Sbjct: 250 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 309
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + SR++++ +++AG + E A +F + + WN +I+ ++Q G
Sbjct: 310 IFDSMP-SRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNV----IAWNVLIAAYAQNG 364
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD---ES 184
EA +LF +++ + P+ +VL+AC +++ L+LG++ H HV++ D ES
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPES 424
Query: 185 ---MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+ MY+K G + F++ + D WNAMI GY +NG + A+ +F+
Sbjct: 425 DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGYAQNGRAKDALHLFER 482
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M P+S + + VLSACGH+G VD+ + F M +D G+ P ++H+ CMVDLLGR+G
Sbjct: 483 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAG 542
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L EA ELI+++P EP ++ SLLGAC H N +LGE A +L E++PEN P+V+LSN
Sbjct: 543 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSN 602
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA +G+W DV R+R+ + DR ++K PG S
Sbjct: 603 MYAEMGKWADVFRVRRSMKDRGVSKQPGCS 632
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 71/339 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F S +SACA+ L+ G QVHGL + D IGTALVDMY KC A VF
Sbjct: 150 NAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVF 209
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RN+++WN++I NG +A+ LF + GF PD T
Sbjct: 210 DAMP-ERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVT-------------- 254
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
++SV+SACA L+A + G++ H H+++ D L D + A
Sbjct: 255 ---------------------LSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNA 293
Query: 189 LISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAFW 219
L+ MY KCG+ AR FD ++ + W
Sbjct: 294 LVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAW 353
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N +I+ Y +NGE E A+ +F ++++ + P ++ VL+ACG+ + Q +
Sbjct: 354 NVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLK 413
Query: 280 D---FGLKPKQEHF--GCMVDLLGRSGRLDEARELIREL 313
+ F P+ + F +VD+ ++G +D+ ++ +
Sbjct: 414 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 452
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 156/347 (44%), Gaps = 12/347 (3%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
R HG LK +T + LV Y + G L A VF + RN ++N +++
Sbjct: 36 ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIP-LRNTFSYNALLSAYA 94
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF--EAFKLFEKMQSTGMVPS 147
GR ++A LFE + PD ++N++++ ++ G +A + M + V +
Sbjct: 95 RLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLN 150
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
S LSACA L+ G++ HG V R+ D + TAL+ MY KC +P ARR FD
Sbjct: 151 AYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFD 210
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
+ + WN++I+ Y +NG A+ +F M P+ + +V+SAC
Sbjct: 211 AMPER--NVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAE 268
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ Q+ M L+ +VD+ + GR EAR + +P +V S+L
Sbjct: 269 REGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAG 328
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
+ S E+ + +M +N + +L YA G E+ R+
Sbjct: 329 ---YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRL 372
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+V L+ + + +L + HG V+++ + + + L+S Y + G+ AR
Sbjct: 13 LVAHLRASSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREAR 72
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
R FD ++ + +NA++S Y R G + A +F+ + P+ S+ AV++A
Sbjct: 73 RVFDGIPLR--NTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALAR 126
Query: 264 --AGHVDKALQIFTMMD-DDF---------------------------GLKPKQEHFG-- 291
GH AL+ M DDF GL + H
Sbjct: 127 HGRGHAGDALRFLAAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDV 186
Query: 292 ----CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+VD+ + R +AR + +PE V ++SL+ C+ N +GE + + ++ M
Sbjct: 187 HIGTALVDMYAKCERPVDARRVFDAMPERNVVSWNSLI-TCY-EQNGPVGEALVLFVEMM 244
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALVDMY 56
C ++ P+SVT I V+SAC + GR + HG+T + T +VD+
Sbjct: 485 CSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHY------TCMVDLL 538
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G L A + +++ + + W +++ L+ K +EL E A F+ DP
Sbjct: 539 GRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH----KNVELGERTAGRLFELDPENS 594
Query: 117 NSMI---SGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + ++++G + F++ M+ G+ C
Sbjct: 595 GPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGC 631
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 228/383 (59%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI +C+ L+ G+QVH K +S+ + AL+DMY KC L AH V
Sbjct: 117 PDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKV 176
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+ ++WN++I+G + G+ KA LF+ + + +W +MISG+++LG
Sbjct: 177 FDGMV-ERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTI----VSWTAMISGYTRLGS 231
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F +MQ G+ P + SVL ACA L AL++GK H + R L + S+ A
Sbjct: 232 YADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNA 291
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + FDQ + D W+ MI G +G+ A+E+F M++ K++
Sbjct: 292 LMEMYSKCGCIGQAYQLFDQ--MSKGDVISWSTMIGGLANHGKAREAIELFKRMKKAKIE 349
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +LSAC HAG ++ L F M D+ ++P+ EH+GC+VD+LGR+GRL +A +
Sbjct: 350 PNGITFLGLLSACAHAGFWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLSQALD 409
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I ++P +P ++ SLL +C H N D+ L+E+EP++ +V+LSNIYA L +
Sbjct: 410 VIEKMPMKPDSKIWGSLLSSCRTHSNLDIAIIAMEHLEELEPDDTGNYVLLSNIYADLAK 469
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V R+R++I + + K PG S
Sbjct: 470 WDGVSRMRKLIKSKSMKKTPGSS 492
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 153/388 (39%), Gaps = 65/388 (16%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F+ ++ C +++ L + +H +K + + T +VD+ K L A +F+++K
Sbjct: 17 FVPILQNCKNIVEL---KSIHAHVIKYSLSQSSFLVTKMVDVCDKTEDLGYASLLFKQVK 73
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
L +N MI N A+ ++ E
Sbjct: 74 EPNGYL-YNAMIRAHTHNKVYALAILFYK----------------------------EML 104
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+L + + P V+ +C+ L LGK+ H H+ + + +M ALI MY
Sbjct: 105 RLKDPESENPIFPDRFTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMY 164
Query: 194 MKCGQPSWARRFFDQ----------------------------FEIKPDDPAF-WNAMIS 224
KC A + FD F++ P W AMIS
Sbjct: 165 TKCASLLDAHKVFDGMVERDAISWNSIISGHVGVGQMRKAGALFDLMPYRTIVSWTAMIS 224
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY R G Y A+ +F MQ V+P+ S ++VL AC G ++ I D + GL
Sbjct: 225 GYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGALEVGKWIHMYCDRN-GLL 283
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AM 342
K ++++ + G + +A +L ++ + V + +++G H + E+ M
Sbjct: 284 RKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRM 343
Query: 343 KLQEMEPENPTPFVILSNIYAGLGRWED 370
K ++EP N F+ L + A G W +
Sbjct: 344 KKAKIEP-NGITFLGLLSACAHAGFWNE 370
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ ISV+ ACA L L+ G+ +H + T I AL++MY KCGC+ A+
Sbjct: 248 EPDEISIISVLPACAQLGALEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQ 307
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++++W+TMI G+ +G++ +A+ELF+ + +P+ T+ ++S + G
Sbjct: 308 LFDQMSKG-DVISWSTMIGGLANHGKAREAIELFKRMKKAKIEPNGITFLGLLSACAHAG 366
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLS 162
E F+ M + P ++ C+ +L LS
Sbjct: 367 FWNEGLAYFDSMSKDYHIEPEVEHYGCLVDILGRAGRLS 405
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 225/384 (58%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT +S I+ACA L L G+ H L+ + I A++DMY+KCG A V
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKV 389
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + ++ ++TWN++IAG++ +G E A +F+ E + D +WN+MI Q+ M
Sbjct: 390 FEHMP-NKTVVTWNSLIAGLVRDGDMELAWRIFD----EMLERDLVSWNTMIGALVQVSM 444
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +MQ+ G+ + + SAC L AL L K ++ + D++ D + TA
Sbjct: 445 FEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTA 504
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ M+ +CG PS A F + E + D + W A I G E A+E+F+ M ++KVK
Sbjct: 505 LVDMFSRCGDPSSAMHVFKRMEKR--DVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVK 562
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ FVA+L+AC H G VD+ Q+F M+ G++P H+GCMVDLLGR+G L+EA +
Sbjct: 563 PDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVD 622
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ +P EP V+ SLL AC H N +L A KL ++ PE V+LSNIYA G+
Sbjct: 623 LIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGK 682
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W DV R+R + ++ + K+PG S+
Sbjct: 683 WTDVARVRLQMKEKGVQKVPGSSS 706
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 177/385 (45%), Gaps = 72/385 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT + VISACA L L+ G++V ++ + T++ ALVDMY+KCG + A
Sbjct: 228 EPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQ 287
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E ++N++ +NT+++ + + + + + + + +G +PD T
Sbjct: 288 IFDEC-ANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVT------------ 334
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S ++ACA L L +GK +H +V+R L ++++
Sbjct: 335 -----------------------MLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISN 371
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE---------------- 231
A+I MYMKCG+ A + F+ K WN++I+G R+G+
Sbjct: 372 AIIDMYMKCGKREAACKVFEHMPNKT--VVTWNSLIAGLVRDGDMELAWRIFDEMLERDL 429
Query: 232 ---------------YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+E A+E+F MQ + + + + V + SACG+ G +D A + T
Sbjct: 430 VSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTY 489
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
++ + + + +VD+ R G A + + + + VS + + +G N++
Sbjct: 490 IEKN-DIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEG 548
Query: 337 GEEM--AMKLQEMEPENPTPFVILS 359
E+ M Q+++P++ +L+
Sbjct: 549 AIELFNEMLEQKVKPDDVVFVALLT 573
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 43/320 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF ++SAC+ +L L G QVHG LK+ + D + +L+ Y +CG
Sbjct: 128 PDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECG-------- 179
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ + +LF+G+ + + +W S+I+G+S +
Sbjct: 180 ------------------------KVDLGRKLFDGM----LERNVVSWTSLINGYSGRDL 211
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M G+ P+ + V+SACA L L+LGK+ ++ + M A
Sbjct: 212 SKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNA 271
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MYMKCG AR+ FD E + +N ++S Y + + I D M Q+ +
Sbjct: 272 LVDMYMKCGDICAARQIFD--ECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPR 329
Query: 249 PNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ + ++ ++AC G V K+ + + + GL+ ++D+ + G+ + A
Sbjct: 330 PDKVTMLSTIAACAQLGDLSVGKSSHAYVLRN---GLEGWDNISNAIIDMYMKCGKREAA 386
Query: 307 RELIRELPEPTVSVYHSLLG 326
++ +P TV ++SL+
Sbjct: 387 CKVFEHMPNKTVVTWNSLIA 406
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 125/250 (50%), Gaps = 8/250 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N +I G++ G+ +A L+ +M G+VP +LSAC+ + AL G + HG V+
Sbjct: 98 YNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL 157
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ L D ++ +LI Y +CG+ R+ FD + + W ++I+GY + A
Sbjct: 158 KMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDG--MLERNVVSWTSLINGYSGRDLSKEA 215
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
V +F M + V+PN + V V+SAC ++ ++ + + + G++ +VD
Sbjct: 216 VSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYI-SELGMELSTIMVNALVD 274
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP- 354
+ + G + AR++ E + +Y++++ +++ + ++ + L EM + P P
Sbjct: 275 MYMKCGDICAARQIFDECANKNLVMYNTIMSN---YVHHEWASDVLVILDEMLQKGPRPD 331
Query: 355 -FVILSNIYA 363
+LS I A
Sbjct: 332 KVTMLSTIAA 341
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 231/391 (59%), Gaps = 15/391 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ VT SVISACASL ++ G++VHG +K +K ++D ++ A VDMY KC + A
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + RN++ +MI+G + ++ A +F +A + +WN++I+G++Q
Sbjct: 310 FIFDSMP-IRNVIAETSMISGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQN 364
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN------ 180
G EA LF ++ + P+ ++L ACADL+ L LG + H HV++
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEE 424
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MY+KCG F + + D WNAMI G+ +NG A+E+F
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + KP+ + + VLSACGHAG V++ F+ M DFG+ P ++H+ CMVDLLGR+
Sbjct: 483 EMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L+EA+ +I E+P +P ++ SLL AC H N LG+ +A KL E+EP N P+V+LS
Sbjct: 543 GFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLS 602
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA LG+WEDV +R+ + +TK PG S
Sbjct: 603 NMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 158/322 (49%), Gaps = 8/322 (2%)
Query: 5 LSDEPNSVTFISVISAC-ASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
LS +S F ++ +C S L + R VH +K ++ I L+D Y KCG L
Sbjct: 13 LSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
VF ++ RNI TWN+++ G+ G ++A LF + D TWNSM+SGF
Sbjct: 73 DGRQVFDKMP-QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGF 127
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q EA F M G V + SVLSAC+ L+ + G + H + ++ D
Sbjct: 128 AQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDV 187
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +AL+ MY KCG + A+R FD E+ + WN++I+ + +NG A+++F +M
Sbjct: 188 YIGSALVDMYSKCGNVNDAQRVFD--EMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +V+P+ + +V+SAC + ++ + + L+ VD+ + R+
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 304 DEARELIRELPEPTVSVYHSLL 325
EAR + +P V S++
Sbjct: 306 KEARFIFDSMPIRNVIAETSMI 327
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/424 (35%), Positives = 233/424 (54%), Gaps = 44/424 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSV+ ISAC+ LL+L+ G+++H +K + D + +ALVDMY KC CL A
Sbjct: 138 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VFQ++ ++++ WN+MI G + G S+ +E+ + EG +P T
Sbjct: 198 VFQKMP-RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 256
Query: 116 ---------------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
WN MIS + +G F+A +++++M S G+ P +
Sbjct: 257 NLLHGKFIHANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDV 316
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
TSVL AC+ L+AL+ GK+ H + + L DE + +AL+ MY KCG A R F+
Sbjct: 317 VTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNS 376
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
I D W MIS YG +G+ A+ FD MQ+ +KP+ + +AVLSACGHAG +D
Sbjct: 377 --IPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 434
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT--VSVYHSLLG 326
+ L+ F+ M +G++P EH+ CM+D+LGR+GRL EA E+I++ PE + + +L
Sbjct: 435 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 494
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
AC HL LG+ +A L E P++ + +++L N+YA W+ R+R + + L K
Sbjct: 495 ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 554
Query: 387 PGIS 390
PG S
Sbjct: 555 PGCS 558
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 169/381 (44%), Gaps = 48/381 (12%)
Query: 8 EPNSVTFISVISACA-SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
E S +S++ C S L+ + VH L + + D ++ +L+++Y C A
Sbjct: 27 EMESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSAR 86
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+VF+ ++ WN++++ A+WN++IS F Q
Sbjct: 87 HVFENFDIRSDVYIWNSLMS---------------------------ASWNTVISCFYQS 119
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A +LF +M+S+G P+ +T +SAC+ L L+ GKE H ++ DE +
Sbjct: 120 GEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVN 179
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+AL+ MY KC AR F + K WN+MI GY G+ +S VEI + M E
Sbjct: 180 SALVDMYGKCDCLEVAREVFQKMPRKS--LVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 237
Query: 247 VKPNSASFVAVLSAC--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
+P+ + ++L AC G H + A +F+ D E + M+
Sbjct: 238 TRPSQTTLTSILMACSRSRNLLHGKFIHANLAETVFSKTQKDVA-----ESWNVMISSYI 292
Query: 299 RSGRLDEARELIREL----PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G +A E+ ++ +P V + S+L AC + G+++ + + E E
Sbjct: 293 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 352
Query: 355 FV-ILSNIYAGLGRWEDVGRI 374
+ L ++Y+ G ++ RI
Sbjct: 353 LLSALLDMYSKCGNEKEAFRI 373
>gi|413943774|gb|AFW76423.1| hypothetical protein ZEAMMB73_944105 [Zea mays]
Length = 446
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 233/390 (59%), Gaps = 15/390 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI-GTALVDMYLKCGCLPCAHN 67
P+ VT SV+SACA L + GRQVH +K ++ D M+ ALVDMY KCG A
Sbjct: 8 PDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARC 67
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + SR++++ +++AG + E A +F + + + WN +I+ ++Q G
Sbjct: 68 IFDSMP-SRSVVSETSILAGYAKSANVEDAQVVFSQMV----EKNVIAWNVLIAAYAQNG 122
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN------K 181
EA +LF +++ + P+ +VL+AC +++ L+LG++ H HV++
Sbjct: 123 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPES 182
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + +L+ MY+K G + F++ + D WNAMI GY +NG + A+ +F+
Sbjct: 183 DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGYAQNGRAKDALHLFER 240
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M P+S + + VLSACGH+G VD+ + F M +D G+ P ++H+ CMVDLLGR+G
Sbjct: 241 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAG 300
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L EA ELI+++P EP ++ SLLGAC H N +LGE A +L E++PEN P+V+LSN
Sbjct: 301 HLKEAEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSN 360
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA +G+W DV R+R+ + DR ++K PG S
Sbjct: 361 MYAEMGKWADVFRVRRSMKDRGVSKQPGCS 390
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 35/210 (16%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATALISMYMKCG 197
M +TG P ++SV+SACA L+A + G++ H H+++ D L D + AL+ MY KCG
Sbjct: 1 MMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCG 60
Query: 198 QPSWARRFFDQF-----------------------------EIKPDDPAFWNAMISGYGR 228
+ AR FD ++ + WN +I+ Y +
Sbjct: 61 RTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQ 120
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD---FGLKP 285
NGE E A+ +F ++++ + P ++ VL+ACG+ + Q + + F P
Sbjct: 121 NGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGP 180
Query: 286 KQEHF--GCMVDLLGRSGRLDEARELIREL 313
+ + F +VD+ ++G +D+ ++ +
Sbjct: 181 ESDVFVGNSLVDMYLKTGSIDDGAKVFERM 210
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALVDMY 56
C ++ P+SVT I V+SAC + GR + HG+T + T +VD+
Sbjct: 243 CSNENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHY------TCMVDLL 296
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G L A + +++ + + W +++ L+ K +EL E A F+ DP
Sbjct: 297 GRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH----KNVELGERTAGRLFELDPENS 352
Query: 117 NSMI---SGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + ++++G + F++ M+ G+ C
Sbjct: 353 GPYVLLSNMYAEMGKWADVFRVRRSMKDRGVSKQPGC 389
>gi|15225375|ref|NP_179644.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
gi|75337271|sp|Q9SIL5.1|PP165_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g20540
gi|4586036|gb|AAD25654.1| unknown protein [Arabidopsis thaliana]
gi|67633530|gb|AAY78689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251931|gb|AEC07025.1| mitochondrial editing factor 21 [Arabidopsis thaliana]
Length = 534
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 222/381 (58%), Gaps = 8/381 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF + +CASL G+QVHG K + + AL+DMY+K L AH V
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R++++WN++++G G+ +KA +GL H +W +MISG++ +G
Sbjct: 167 FDEMY-ERDVISWNSLLSGYARLGQMKKA----KGLFHLMLDKTIVSWTAMISGYTGIGC 221
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +MQ G+ P + SVL +CA L +L+LGK H + R K + A
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNA 281
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG S A + F Q E K D W+ MISGY +G A+E F+ MQ+ KVK
Sbjct: 282 LIEMYSKCGVISQAIQLFGQMEGK--DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVK 339
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +LSAC H G + L+ F MM D+ ++PK EH+GC++D+L R+G+L+ A E
Sbjct: 340 PNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ + +P +P ++ SLL +C N D+ L E+EPE+ +V+L+NIYA LG+
Sbjct: 400 ITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGK 459
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
WEDV R+R+MI + + K PG
Sbjct: 460 WEDVSRLRKMIRNENMKKTPG 480
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 123/247 (49%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ ISV+ +CA L L+ G+ +H + T + AL++MY KCG + A
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +++G +++++W+TMI+G +G + A+E F + KP+ T+ ++S S +G
Sbjct: 298 LFGQMEG-KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
M E + F+ M Q + P ++ C+ VL+ L A+++ K + D
Sbjct: 357 MWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM-------PMKPD 409
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+S G A D E++P+D + + + Y G++E + +
Sbjct: 410 SKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKM 469
Query: 242 MQQEKVK 248
++ E +K
Sbjct: 470 IRNENMK 476
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/388 (38%), Positives = 229/388 (59%), Gaps = 11/388 (2%)
Query: 8 EPNSVTFISVISACAS--LLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPC 64
PN +TF++++SAC L L+FG +H K+ + + M+GTALVDMY KCG L
Sbjct: 86 RPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDL 145
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ RN ++WNTMI G M NG +A+ LF+ ++ D +W SMI GF
Sbjct: 146 AWLMFDEMH-VRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSER----DAISWTSMIGGFV 200
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G +A + F +MQ G+ P + SVL+ACA+L AL LG + V++ D +
Sbjct: 201 KKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIK 260
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI MY +CG AR+ F+Q + WN+MI G+ NG E A+E F+LM++
Sbjct: 261 ISNSLIDMYSRCGCIRLARQVFEQMPKR--SLVSWNSMIVGFALNGHAEEALEFFNLMRK 318
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E +P+ SF L+AC H+G VD+ LQ F +M + P+ EH+GC+VDL R+GRL+
Sbjct: 319 EGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLE 378
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A +I +P +P V SLL AC H + L E + L E++P + + +V+LSNIYA
Sbjct: 379 DALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYA 438
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+GRW+ ++R+ + + K PG S+
Sbjct: 439 AVGRWDGASKVRKKMKALGIHKKPGFSS 466
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 142/291 (48%), Gaps = 31/291 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT ISV++ACA+L L G ++ +K + + + I +L+DMY +CGC+ A
Sbjct: 221 EPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQ 280
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+++ R++++WN+MI G LNG +E+A+E F + EGF+PD ++ ++ S G
Sbjct: 281 VFEQMP-KRSLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSG 339
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADL-SALKLGKETHGHVIRADLNKD 182
+ E + F+ M+ T + P ++ C+ + S L AL + + + +
Sbjct: 340 LVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNV-------IANMPMKPN 392
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
E + +L++ G A R E+ P + + + + Y G ++ A ++
Sbjct: 393 EVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKK 452
Query: 242 MQQEKV--KPNSAS---------FVAVLSACGHAGHVDKALQIFTMMDDDF 281
M+ + KP +S FVA G HV+ I+ M+D F
Sbjct: 453 MKALGIHKKPGFSSIEMDGSIHEFVA-----GDKTHVETQ-NIYAMLDHLF 497
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
Query: 105 AHEGFKPDP-ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--L 161
+H DP +W S I+ + G EA F +MQ G+ P+ ++LSAC D L
Sbjct: 45 SHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPL 104
Query: 162 SALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
L+ G H +V + L+ + M TAL+ MY KCGQ A FD+ ++ + WN
Sbjct: 105 EGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR--NSVSWN 162
Query: 221 AMISGYGRNGE-------------------------------YESAVEIFDLMQQEKVKP 249
MI G RNGE +E A+E F MQ V+P
Sbjct: 163 TMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEP 222
Query: 250 NSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + ++VL+AC + G + L I F M D K + ++D+ R G + AR
Sbjct: 223 DYVTIISVLAACANLGALGLGLWINRFVMKQD---FKDNIKISNSLIDMYSRCGCIRLAR 279
Query: 308 ELIRELPEPTVSVYHSLL 325
++ ++P+ ++ ++S++
Sbjct: 280 QVFEQMPKRSLVSWNSMI 297
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 213 PDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-------- 263
P DP W + I+ + RNG+ A F MQ V+PN +F+ +LSAC
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
G + ++ GL + G +VD+ + G+LD A + E+ ++
Sbjct: 110 GGSIHAYVR-------KLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWN 162
Query: 323 SLLGACWCHLNSDLGEEMAM 342
+++ C N ++GE + +
Sbjct: 163 TMIDGCM--RNGEVGEAIVL 180
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 223/384 (58%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T SV+ AC +LL L GR +HG+ K+ +S+ + +V +Y CG + A +
Sbjct: 126 PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLL 185
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ R+++TWN MIA ++ G E A +LF + + +W SMI+G+ Q G
Sbjct: 186 FEKMP-QRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR----SWTSMIAGYVQCGK 240
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF KM+ G+ + V +VL+ACADL AL LG H + R ++ ++
Sbjct: 241 AKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNT 300
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG A + F++ E + W+AMI G +G E A+ +F M Q ++
Sbjct: 301 LIDMYVKCGCLEEACKVFEEMEER--TVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +L AC H G + + + F M D+G+ P+ EH+GCMVDLL R+G L EA E
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P +P V+ +LLGAC H N ++ EE L E++P N +V+LSNIYA GR
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGR 478
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WED R+R+ + DRQ+ K PG S+
Sbjct: 479 WEDTARVRKFMKDRQVKKTPGWSS 502
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 32/264 (12%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
A ++FE + E KP+ WNS + ++ +A LF +++ + P +SVL
Sbjct: 79 AQQIFECV--EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLR 136
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF---------- 206
AC +L L G+ HG V + + + ++ +Y CG+ AR F
Sbjct: 137 ACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVT 196
Query: 207 ------------------DQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
D F P+ + W +MI+GY + G+ + A+ +F M++ V
Sbjct: 197 WNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGV 256
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K N + VAVL+AC G +D ++I + G K ++D+ + G L+EA
Sbjct: 257 KCNEVTVVAVLAACADLGALDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEAC 315
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
++ E+ E TV + +++G H
Sbjct: 316 KVFEEMEERTVVSWSAMIGGLAMH 339
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/385 (37%), Positives = 218/385 (56%), Gaps = 4/385 (1%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ PNSVT S++ AC L L+ GR+VHG ++ + + +ALV+MY C + A
Sbjct: 175 ERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQ 234
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + R+ ++WN +I LN EK + +F + EG + A+WN++I G Q
Sbjct: 235 LVFDSMS-RRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQN 293
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A ++ +MQ++G P+ +TSVL AC +L +L+ GK+ HG++ R +D +
Sbjct: 294 GRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTT 353
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ MY KCG +RR F + D WN MI +G E A+ +F M
Sbjct: 354 TALVFMYAKCGDLELSRRVFSMMTKR--DTVSWNTMIIATSMHGNGEEALLLFREMVDSG 411
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PNS +F VLS C H+ VD+ L IF M D ++P +H CMVD+L R+GRL+EA
Sbjct: 412 VRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEA 471
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E I+++P EPT + +LLG C + N +LG A +L E+E +NP +V+LSNI
Sbjct: 472 YEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSA 531
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
W + R+++ DR +TK PG S
Sbjct: 532 KLWSEASETRKLMRDRGVTKNPGCS 556
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
K C+ EP+ + +SV ACASL + ++VH ++ SD ++G AL+DMY KC C
Sbjct: 71 KNCV--EPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRC 128
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
SE A +FEG+ D +W SM S
Sbjct: 129 --------------------------------SEGARLVFEGMPFR----DVISWTSMAS 152
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ G+ EA F KM G P+ V+S+L AC DL LK G+E HG V+R +
Sbjct: 153 CYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGG 212
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +++AL++MY C A+ FD + D WN +I+ Y N E E + +F
Sbjct: 213 NVFVSSALVNMYASCLSIRQAQLVFDSMSRR--DTVSWNVLITAYFLNKECEKGLSVFGR 270
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
M E V N AS+ AV+ C G +KAL++ + M + G KP Q
Sbjct: 271 MMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNS-GFKPNQ 315
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLK 149
+G ++A LF+ + +PD TW +IS ++ G EA + + + V P
Sbjct: 24 SGDLQRARHLFDKIP----QPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKL 79
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
+ SV ACA L + K H IR D + ALI MY KC AR F+
Sbjct: 80 LLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGM 139
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
+ D W +M S Y G A+ F M +PNS + ++L AC
Sbjct: 140 PFR--DVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPAC 189
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 223/384 (58%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T SV+ AC +LL L GR +HG+ K+ +S+ + +V +Y CG + A +
Sbjct: 126 PDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLL 185
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ R+++TWN MIA ++ G E A +LF + + +W SMI+G+ Q G
Sbjct: 186 FEKMP-QRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVR----SWTSMIAGYVQCGK 240
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF KM+ G+ + V +VL+ACADL AL LG H + R ++ ++
Sbjct: 241 AKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNT 300
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG A + F++ E + W+AMI G +G E A+ +F M Q ++
Sbjct: 301 LIDMYVKCGCLEEACKVFEEMEER--TVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIE 358
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +L AC H G + + + F M D+G+ P+ EH+GCMVDLL R+G L EA E
Sbjct: 359 PNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHE 418
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P +P V+ +LLGAC H N ++ EE L E++P N +V+LSNIYA GR
Sbjct: 419 FILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGR 478
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WED R+R+ + DRQ+ K PG S+
Sbjct: 479 WEDTARVRKFMKDRQVKKTPGWSS 502
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 112/254 (44%), Gaps = 30/254 (11%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
E KP+ WNS + ++ +A LF +++ + P +SVL AC +L L
Sbjct: 87 EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSN 146
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF-------------------- 206
G+ HG V + + + ++ +Y CG+ AR F
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206
Query: 207 --------DQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
D F P+ + W +MI+GY + G+ + A+ +F M++ VK N + VAV
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
L+AC G +D ++I + G K ++D+ + G L+EA ++ E+ E T
Sbjct: 267 LAACADLGALDLGMRIHE-YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERT 325
Query: 318 VSVYHSLLGACWCH 331
V + +++G H
Sbjct: 326 VVSWSAMIGGLAMH 339
>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial; Flags: Precursor
gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 628
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 152/387 (39%), Positives = 223/387 (57%), Gaps = 43/387 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF +V+++C L G+Q+HGL +K S +G++L+DMY K G +
Sbjct: 150 KPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQI----- 204
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++A E+FE L D + ++I+G++QLG
Sbjct: 205 ---------------------------KEAREIFECLPER----DVVSCTAIIAGYAQLG 233
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA ++F ++ S GM P+ S+L+A + L+ L GK+ H HV+R +L +
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG S+ARR FD P+ A WNAM+ GY ++G +E+F LM+ EK
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNM---PERTAISWNAMLVGYSKHGLGREVLELFRLMRDEK 350
Query: 247 -VKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP++ + +AVLS C H D L IF M+ ++G KP EH+GC+VD+LGR+GR+D
Sbjct: 351 RVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRID 410
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA E I+ +P +PT V SLLGAC HL+ D+GE + +L E+EPEN +VILSN+YA
Sbjct: 411 EAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYA 470
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV +R M+ + +TK PG S
Sbjct: 471 SAGRWADVNNVRAMMMQKAVTKEPGRS 497
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 113/270 (41%), Gaps = 20/270 (7%)
Query: 104 LAHEGFKPDPATWN-SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
L H F P + I SQL + +M G ++L+AC D
Sbjct: 7 LIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKR 66
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
AL+ G+ H H+I+ + T L+ Y KC AR+ D E+ + W AM
Sbjct: 67 ALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLD--EMPEKNVVSWTAM 124
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
IS Y + G A+ +F M + KPN +F VL++C A + QI G
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI-------HG 177
Query: 283 LKPK---QEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
L K H ++D+ ++G++ EARE+ LPE V V + + A + L D
Sbjct: 178 LIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV-VSCTAIIAGYAQLGLD- 235
Query: 337 GEEMAMKLQEMEPENPTP-FVILSNIYAGL 365
EE + E +P +V +++ L
Sbjct: 236 -EEALEMFHRLHSEGMSPNYVTYASLLTAL 264
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 220/384 (57%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T SV+ A L L G +HG +K SD + +AL+DMY KC C
Sbjct: 247 EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQ 306
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++ + N I G+ NG+ E ++ LF L +G + + +W SMI+ SQ G
Sbjct: 307 VFDQMD-HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNG 365
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +MQ G+ P+ + +L AC +++AL GK H +R ++ D + +
Sbjct: 366 RDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGS 425
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ +R FD K + WNA+I+GY +G+ + A+EIFDLMQ+
Sbjct: 426 ALIDMYAKCGRIQASRICFDGIPTK--NLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ 483
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ SF VLSAC +G ++ F M +G++ + EH+ CMV LL R+G+L++A
Sbjct: 484 KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAY 543
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+IR +P P V+ +LL +C H N LGE A KL E+EP NP +++LSNIYA G
Sbjct: 544 AMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKG 603
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V R+R M+ ++ L K PG S
Sbjct: 604 MWNEVNRVRDMMKNKGLRKNPGCS 627
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 155/295 (52%), Gaps = 4/295 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ S + ACA L L+ RQVHG+ SD+ + ++LV MY+KC + AH V
Sbjct: 112 PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRV 171
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++W+ ++A G ++A LF + G +P+ +WN MI+GF+ G+
Sbjct: 172 FDRMF-EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M G P ++SVL A DL L +G HG+VI+ L D+ +++A
Sbjct: 231 YSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KC S + FDQ + D NA I G RNG+ ES++ +F ++ + ++
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQMDHM--DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
N S+ ++++ C G +AL++F M G+KP C++ G L
Sbjct: 349 LNVVSWTSMIACCSQNGRDMEALELFREMQIA-GVKPNSVTIPCLLPACGNIAAL 402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P+ +++++I FS+ A F +M + G++P + + S + ACA LSALK ++
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG + + D + ++L+ MY+KC Q A R FD+ +PD + W+A+++ Y R
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVS-WSALVAAYARQ 193
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
G + A +F M V+PN S+ +++ H+G +A+ +F M
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 230/382 (60%), Gaps = 7/382 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F V++ C L + RQVHG L S+ ++ ++++D Y+KCG + A +F
Sbjct: 191 NGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLF 250
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +R++L W TM++G G + A ELF + + +P +W ++ISG+++ GM
Sbjct: 251 DEM-SARDVLAWTTMVSGYAKWGDMKSANELFVEMPEK----NPVSWTALISGYARNGMG 305
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LF KM + P +S L ACA +++LK GK+ H +++R + + + +AL
Sbjct: 306 HKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSAL 365
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG R+ FD K D WN +IS ++G E A+++ D M + KP
Sbjct: 366 IDMYSKCGSLGIGRKVFDLMGNKLD-VVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKP 424
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +FV +L+AC H+G V + L F M D+G+ P QEH+ C++DLLGR+G +E +
Sbjct: 425 DKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQ 484
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++P +P V+++LLG C H + +LG + A +L E+EP++ T +V+LS+IYA LGRW
Sbjct: 485 LEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRW 544
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E V ++RQ++N+RQ+ K IS
Sbjct: 545 ESVQKVRQLMNERQVKKERAIS 566
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 47/387 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHN 67
+S T S++ CA L+ G++VH L LK+ K+ T + L++MY KCG A
Sbjct: 58 DSRTLASLLQHCADSRALREGKRVH-LHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARK 116
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +RN+ +WN M++G G + A +LF+ + + D +WN+M+ +Q G
Sbjct: 117 VFDKM-SARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEK----DVVSWNTMVIAHAQCG 171
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + + + + G+ + VL+ C L + L ++ HG ++ A + +++
Sbjct: 172 YWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSS 231
Query: 188 ALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAF 218
+++ Y+KCG AR+ FD+ E+ +P
Sbjct: 232 SVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVS 291
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W A+ISGY RNG A+E+F M V+P+ +F + L AC + QI +
Sbjct: 292 WTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYL- 350
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP-TVSVYHSLLGACWCHLNSDLG 337
+P ++D+ + G L R++ + V ++++++ A H G
Sbjct: 351 LRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQH---GCG 407
Query: 338 EEMAMKLQEM-----EPENPTPFVILS 359
EE L +M +P+ T VIL+
Sbjct: 408 EEAIQMLDDMVRSGAKPDKITFVVILN 434
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF S + ACAS+ L+ G+Q+H L+I Q +T++ +AL+DMY KCG L
Sbjct: 321 RPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRK 380
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + +++ WNT+I+ + +G E+A+++ + + G KPD T+ +++ S G
Sbjct: 381 VFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHSG 440
Query: 128 MRFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + FE M G+VPS C+ +L +E + + D+
Sbjct: 441 LVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCF------EEVMDQLEKMPYKPDD 494
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ + G R+ ++ E++P + + S Y G +ES ++ LM
Sbjct: 495 RVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLM 554
Query: 243 QQEKVKPNSA 252
+ +VK A
Sbjct: 555 NERQVKKERA 564
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES-MATAL 189
EA E + G+ + + S+L CAD AL+ GK H H+ L + + ++ L
Sbjct: 42 EAVSSLENLARRGLRLDSRTLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHL 101
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY KCG+ AR+ FD+ + + WN M+SGY + G + A ++FD M ++ V
Sbjct: 102 INMYAKCGKEVEARKVFDKMSAR--NLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDV-- 157
Query: 250 NSASFVAVLSACGHAGHVDKALQIFT 275
S+ ++ A G+ D+AL+ ++
Sbjct: 158 --VSWNTMVIAHAQCGYWDEALRFYS 181
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 220/384 (57%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T SV+ A L L G +HG +K SD + +AL+DMY KC C
Sbjct: 247 EPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQ 306
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++ + N I G+ NG+ E ++ LF L +G + + +W SMI+ SQ G
Sbjct: 307 VFDQMD-HMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNG 365
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +MQ G+ P+ + +L AC +++AL GK H +R ++ D + +
Sbjct: 366 RDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGS 425
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ +R FD K + WNA+I+GY +G+ + A+EIFDLMQ+
Sbjct: 426 ALIDMYAKCGRIQASRICFDGIPTK--NLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ 483
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ SF VLSAC +G ++ F M +G++ + EH+ CMV LL R+G+L++A
Sbjct: 484 KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAY 543
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+IR +P P V+ +LL +C H N LGE A KL E+EP NP +++LSNIYA G
Sbjct: 544 AMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKG 603
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V R+R M+ ++ L K PG S
Sbjct: 604 MWNEVNRVRDMMKNKGLRKNPGCS 627
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 155/295 (52%), Gaps = 4/295 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ S + ACA L L+ RQVHG+ SD+ + ++LV MY+KC + AH V
Sbjct: 112 PDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRV 171
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++W+ ++A G ++A LF + G +P+ +WN MI+GF+ G+
Sbjct: 172 FDRM-FEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGL 230
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M G P ++SVL A DL L +G HG+VI+ L D+ +++A
Sbjct: 231 YSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSA 290
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KC S + FDQ + D NA I G RNG+ ES++ +F ++ + ++
Sbjct: 291 LIDMYGKCSCTSEMSQVFDQMDHM--DVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGME 348
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
N S+ ++++ C G +AL++F M G+KP C++ G L
Sbjct: 349 LNVVSWTSMIACCSQNGRDIEALELFREMQIA-GVKPNSVTIPCLLPACGNIAAL 402
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P+ +++++I FS+ A F +M + G++P + + S + ACA LSALK ++
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG + + D + ++L+ MY+KC Q A R FD+ +PD + W+A+++ Y R
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVS-WSALVAAYARQ 193
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
G + A +F M V+PN S+ +++ H+G +A+ +F M
Sbjct: 194 GCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDM 241
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 231/387 (59%), Gaps = 14/387 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPCA 65
+ TF SV+SACA+ + G+ VHG +++ ++ + ALV +Y KCG + A
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F +K S+++++WNT+++G + + +KA+E+FE + ++ + +W M+SG+
Sbjct: 353 RRIFDNMK-SKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVH 407
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A KLF +M++ + P +SAC +L +LK GK+ HGH+++ S
Sbjct: 408 GGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA 467
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
ALI+MY +CG A F + P+ D WNAMIS G++G A+E+FD M
Sbjct: 468 GNALITMYARCGAVKEANLMF---LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E + P+ SF+ VL+AC H+G VD+ Q F M DFG+ P ++H+ ++DLLGR+GR+
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EAR+LI+ +P EPT S++ ++L C + +LG A +L +M P++ +++LSN Y+
Sbjct: 585 EARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYS 644
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D R+R+++ DR + K PG S
Sbjct: 645 AAGRWVDAARVRKLMRDRGVKKEPGCS 671
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T+ ISAC L L+ G+Q+HG +++ + G AL+ MY +CG + A+
Sbjct: 427 KPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANL 486
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ +WN MI+ + +G +A+ELF+ + EG PD ++ ++++ + G
Sbjct: 487 MFLVMPNIDSV-SWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSG 545
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F+ FE M+ G++P E
Sbjct: 546 LVDEGFQYFESMKRDFGIIPG-----------------------------------EDHY 570
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T LI + + G+ AR +P P+ W A++SG +G+ E D Q K
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEP-TPSIWEAILSGCRTSGDMELGAHAAD--QLFK 627
Query: 247 VKP-NSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ P + +++ + + AG A ++ +M D
Sbjct: 628 MTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRD 661
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 147/332 (44%), Gaps = 19/332 (5%)
Query: 49 GTALVDMYLKCGCLPCAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
T+LV Y G LP A + F + + R+ + N +I+ + A+ +F L
Sbjct: 91 ATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 108 G-FKPDPATWNSMISGFSQL---GMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADL 161
G +PD ++ +++S L +R A ++S G++ + ++ C L
Sbjct: 151 GSLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEAL 210
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
A + ++ V+ +KD T ++ Y++ G AR F++ ++K D WNA
Sbjct: 211 EATRDARK----VLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFD--VVWNA 264
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG---HVDKALQIFTMMD 278
MISGY +G A E+F M E+V + +F +VLSAC +AG H T +
Sbjct: 265 MISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQ 324
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+F + +V L + G + AR + + V ++++L ++ S +
Sbjct: 325 PNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSG---YVESSCLD 381
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+ +EM +N ++++ + Y G ED
Sbjct: 382 KAVEVFEEMPYKNELSWMVMVSGYVHGGFSED 413
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA-----LK 165
P PA + S Q + + S+ + +L+C+ + L A L A L
Sbjct: 3 PPPARPQGVTSLPHQCSVLLRRLAASRSLTSSSFLRALRCLHARLLTSALLHAPPHPHLT 62
Query: 166 LGKETHGHVIRADLNKDESM---------ATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
L + H + + DL ++ AT+L++ Y G+ A FFD D
Sbjct: 63 L-RLIHLYTLSGDLPAAATLFRADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDT 121
Query: 217 AFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGH 263
NA+IS Y R AV +F L+ ++P+ SF A+LSA GH
Sbjct: 122 VLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAAGH 169
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 221/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF + +CASL G+QVHG K + + AL+DMY+K L AH V
Sbjct: 107 PDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKV 166
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R++++WN++++G G+ +KA +GL H +W +MISG++ +G
Sbjct: 167 FDEM-SERDVISWNSLLSGYARLGQMKKA----KGLFHLMIDKTIVSWTAMISGYTGIGC 221
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +MQ G+ P + SVL +CA L +L+LGK H + R L K + A
Sbjct: 222 YVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNA 281
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG S A + F+Q K D W+ MISGY +G A E F MQ+ KVK
Sbjct: 282 LIEMYSKCGMLSQAIQLFEQ--TKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVK 339
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +LSAC H G + L+ F MM D+ ++PK EH+GC++D+L R+G+L+ A E
Sbjct: 340 PNGITFLGLLSACSHVGLWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVE 399
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ + +P +P ++ SLL +C N D+ L E+EP++ +V+L+NIYA LG+
Sbjct: 400 ITKTMPVKPDSKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGK 459
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV R+R++I + K PG S
Sbjct: 460 WEDVSRLRKIIRKENMKKTPGCS 482
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ ISV+ +CA L L+ G+ +H + T + AL++MY KCG L A
Sbjct: 238 EPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQ 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F++ KG +++++W+TMI+G +G + +A E F + KP+ T+ ++S S +G
Sbjct: 298 LFEQTKG-KDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ + K F+ M Q + P ++ C+ VL+ L A+++ K + D
Sbjct: 357 LWQQGLKYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM-------PVKPD 409
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+S G A D E++PDD + + + Y G++E + +
Sbjct: 410 SKIWGSLLSSCRTKGNLDVALVAMDHLVEVEPDDMGNYVLLANIYADLGKWEDVSRLRKI 469
Query: 242 MQQEKVK 248
+++E +K
Sbjct: 470 IRKENMK 476
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 225/393 (57%), Gaps = 13/393 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
+PNS+T S +SAC +L L+ GR++HG +K+E+ SD ++G +LVD Y KC + A
Sbjct: 209 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 268
Query: 67 NVFQELKGSRNILTWNTMIA--GMMLNGRSEKAMELFE------GLAHEGFKPDPATWNS 118
F +K + ++++WN M+A G G + A+E F+ + E D WNS
Sbjct: 269 RKFGMIKQT-DLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNS 327
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
+IS +Q G A L +M + + + + S L AC+ L+AL+ GKE H +IR
Sbjct: 328 IISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG 387
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L+ + +LI MY +CG +RR FD + D WN MIS YG +G AV +
Sbjct: 388 LDTCNFILNSLIDMYGRCGSIQKSRRIFDL--MPQRDLVSWNVMISVYGMHGFGMDAVNL 445
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F + +KPN +F +LSAC H+G +++ + F MM ++ + P E + CMVDLL
Sbjct: 446 FQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLS 505
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+G+ +E E I ++P EP +V+ SLLGAC H N DL E A L E+EP++ +V+
Sbjct: 506 RAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVL 565
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++NIY+ GRWED +IR ++ +R +TK PG S
Sbjct: 566 MANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 598
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 47/280 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F V AC+ L + G+ V+ L I + ++ + +++DM++KCG + A
Sbjct: 108 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 167
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+E++ +++ WN M++G G +KA+ +F + EG KP+ T
Sbjct: 168 FFEEIE-FKDVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSIT------------ 214
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA-DLNKDESMA 186
+ S +SAC +LS L+ G+E HG+ I+ +L+ D +
Sbjct: 215 -----------------------IASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM--ISGYGRNGEYESAVEIFDLMQ- 243
+L+ Y KC ARR F IK D WNAM ++G+ + G+ ++A+E F M
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGM--IKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHI 309
Query: 244 -----QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
E + + +++SAC +G AL + M+
Sbjct: 310 ACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMN 349
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 117/248 (47%), Gaps = 38/248 (15%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ S++ C L L+ G QVH + +G+ L+++Y + GC+ A +F ++
Sbjct: 13 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM- 71
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+ +W + ME++ GL G E
Sbjct: 72 SERNVFSWTAI-------------MEMYCGL----------------------GDYEETI 96
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KLF M + G+ P V AC++L ++GK+ + +++ + + +++ M+
Sbjct: 97 KLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMF 156
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+KCG+ ARRFF++ E K D WN M+SGY GE++ A+ +F M E VKPNS +
Sbjct: 157 IKCGRMDIARRFFEEIEFK--DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSIT 214
Query: 254 FVAVLSAC 261
+ +SAC
Sbjct: 215 IASAVSAC 222
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
S+L C L L+LG + H ++ ++ E + + L+ +Y + G ARR FD+ +
Sbjct: 14 ASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK--M 71
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ W A++ Y G+YE +++F LM E V+P+ F V AC +
Sbjct: 72 SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ M G + G ++D+ + GR+D AR E+ V +++ ++
Sbjct: 132 DVYDYM-LSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMV 184
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 226/389 (58%), Gaps = 12/389 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+++P+ T +S +SAC +L L+ G ++H K E T I AL+DMY KCGCL A
Sbjct: 294 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCLNIA 352
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F E+ +N++ W +MI+G + G +A +LF+ + D W +MI+G+ Q
Sbjct: 353 RNIFDEM-SMKNVICWTSMISGYINCGDLREARDLFD----KSPVRDVVLWTAMINGYVQ 407
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+A LF +MQ + P V ++L+ CA L AL+ GK HG++ + D +
Sbjct: 408 FHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVV 467
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY KCG + F +E++ D A W ++I G NG+ A+ +F M++
Sbjct: 468 GTALIEMYSKCGCVDKSLEIF--YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERV 525
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ +F+ VLSAC H G V++ + F M ++PK EH+GC++DLLGR+G LDE
Sbjct: 526 GAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDE 585
Query: 306 ARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
A ELI+E+P E V +Y +LL AC H N D+GE +A KL+ +E + + +L+NI
Sbjct: 586 AEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANI 645
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA + RWED ++R+ + + + K+PG S
Sbjct: 646 YASVDRWEDAKKVRRKMKELGVKKMPGCS 674
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 160/376 (42%), Gaps = 71/376 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V+ A L ++ G +V G +K D + +L+DMY + + A +
Sbjct: 195 PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKL 254
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLG 127
F E+ +R+ ++WN MI+G + R E A+ F + EG KPD AT
Sbjct: 255 FDEMT-TRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEAT------------ 301
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSAC L L+LG E H +V R +L +
Sbjct: 302 -----------------------VVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDN 337
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKP-----------------------------DDPAF 218
AL+ MY KCG + AR FD+ +K D
Sbjct: 338 ALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVL 397
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + ++ AV +F MQ +K+KP+ + V +L+ C G +++ I +D
Sbjct: 398 WTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 457
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
++ + ++++ + G +D++ E+ EL + + + S++ C +N E
Sbjct: 458 EN-RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII--CGLAMNGKTSE 514
Query: 339 EMAMKLQEMEPENPTP 354
+ + EME P
Sbjct: 515 ALRL-FSEMERVGAKP 529
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 5/218 (2%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P +N M+ +++ G+ + LF++++ G+ P VL A L ++ G++
Sbjct: 160 PSLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 219
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G +++ ++ D + +LI MY + A++ FD E+ D WN MISGY R
Sbjct: 220 RGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD--EMTTRDSVSWNVMISGYVRCR 277
Query: 231 EYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+E A+ F MQQE KP+ A+ V+ LSAC +++ +I + + G + ++
Sbjct: 278 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN 337
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++D+ + G L+ AR + E+ V + S++
Sbjct: 338 --ALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISG 373
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 214/374 (57%), Gaps = 8/374 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T V+ AC+ LL ++ G+ VHG K+ QS+ + +V +Y CG + A V
Sbjct: 111 PDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKV 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+++TWN MIA ++ G +E A +LF + + +W SMI G++Q G
Sbjct: 171 FDKMP-QRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVR----SWTSMIGGYAQCGK 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M+ G++P+ V +VL ACAD+ L LG+ H R+ K+ +
Sbjct: 226 SKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNT 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG A R FD E + W+AMI+G +G E A+ +F+ M VK
Sbjct: 286 LIDMYVKCGCLEDACRIFDNMEERT--VVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN+ +F+ +L AC H G V+K + F M D+G+ P+ EH+GCMVDL R+G L EA E
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHE 403
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P P V+ +LLG C H N L EE L +++P N +V+LSNIYA GR
Sbjct: 404 FIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGR 463
Query: 368 WEDVGRIRQMINDR 381
WEDV R+R+++ DR
Sbjct: 464 WEDVARVRKLMRDR 477
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 30/245 (12%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+ + F++ +A LF +++ + P + VL AC+ L ++ GK HG+V
Sbjct: 81 WNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVE 140
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQF-------------------------- 209
+ L + + ++ +Y CG+ AR+ FD+
Sbjct: 141 KLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYK 200
Query: 210 ---EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
E+ + W +MI GY + G+ + A+++F M+ + PN + VAVL AC G+
Sbjct: 201 LFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGN 260
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ +I + G + ++D+ + G L++A + + E TV + +++
Sbjct: 261 LVLGRRIHDFSNRS-GYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIA 319
Query: 327 ACWCH 331
H
Sbjct: 320 GLAAH 324
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQV-------HGLTLKIEKQSDTMIGTALVDMYLKCG 60
+PN+VTFI ++ AC+ + ++ GR+ +G+ +IE +VD++ + G
Sbjct: 343 KPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYG------CMVDLFSRAG 396
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNS 118
L AH + + N + W ++ G + K ++L E K DP +
Sbjct: 397 LLQEAHEFIMNMPIAPNGVVWGALLGGC----KVHKNVKLAEEATRHLSKLDPLNDGYYV 452
Query: 119 MISGFSQLGMRFEAF--------------KLFEKMQSTGMVPSLKCV 151
++S R+E KL ++M+ G VP+ V
Sbjct: 453 VLSNIYAEAGRWEDVARVRKLMRDRGTWEKLLQRMKLKGYVPNTSVV 499
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 146/389 (37%), Positives = 226/389 (58%), Gaps = 12/389 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+++P+ T +S +SAC +L L+ G ++H K E T I AL+DMY KCGCL A
Sbjct: 340 NEKPDEATVVSTLSACTALKNLELGDEIHNYVRK-ELGFTTRIDNALLDMYAKCGCLNIA 398
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F E+ +N++ W +MI+G + G +A +LF+ + D W +MI+G+ Q
Sbjct: 399 RNIFDEM-SMKNVICWTSMISGYINCGDLREARDLFD----KSPVRDVVLWTAMINGYVQ 453
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+A LF +MQ + P V ++L+ CA L AL+ GK HG++ + D +
Sbjct: 454 FHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVV 513
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY KCG + F +E++ D A W ++I G NG+ A+ +F M++
Sbjct: 514 GTALIEMYSKCGCVDKSLEIF--YELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERV 571
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ +F+ VLSAC H G V++ + F M ++PK EH+GC++DLLGR+G LDE
Sbjct: 572 GAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDE 631
Query: 306 ARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
A ELI+E+P E V +Y +LL AC H N D+GE +A KL+ +E + + +L+NI
Sbjct: 632 AEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANI 691
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA + RWED ++R+ + + + K+PG S
Sbjct: 692 YASVDRWEDAKKVRRKMKELGVKKMPGCS 720
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 160/376 (42%), Gaps = 71/376 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V+ A L ++ G +V G +K D + +L+DMY + + A +
Sbjct: 241 PDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKL 300
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLG 127
F E+ +R+ ++WN MI+G + R E A+ F + EG KPD AT
Sbjct: 301 FDEMT-TRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEAT------------ 347
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSAC L L+LG E H +V R +L +
Sbjct: 348 -----------------------VVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDN 383
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKP-----------------------------DDPAF 218
AL+ MY KCG + AR FD+ +K D
Sbjct: 384 ALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVL 443
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + ++ AV +F MQ ++VKP+ + V +L+ C G +++ I +D
Sbjct: 444 WTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 503
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
++ + ++++ + G +D++ E+ EL + + + S++ C +N E
Sbjct: 504 EN-RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSII--CGLAMNGKTSE 560
Query: 339 EMAMKLQEMEPENPTP 354
+ + EME P
Sbjct: 561 ALRL-FSEMERVGAKP 575
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 108/218 (49%), Gaps = 5/218 (2%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P +N M+ +++ G+ + LF++++ G+ P VL A L ++ G++
Sbjct: 206 PSLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKV 265
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G +++ ++ D + +LI MY + A++ FD E+ D WN MISGY R
Sbjct: 266 RGFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFD--EMTTRDSVSWNVMISGYVRCR 323
Query: 231 EYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+E A+ F MQQE KP+ A+ V+ LSAC +++ +I + + G + ++
Sbjct: 324 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTRIDN 383
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++D+ + G L+ AR + E+ V + S++
Sbjct: 384 --ALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISG 419
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 141/336 (41%), Positives = 209/336 (62%), Gaps = 8/336 (2%)
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
Y++ G + A +FQ + RN+++WN +I+G NG+ E+A++LF+ + + + +
Sbjct: 301 YVQNGSVKEAFKLFQ-IMPERNVISWNAVISGFAQNGQVEEALKLFKTMP----ECNVVS 355
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+MI+G+SQ G A KLF +MQ M P+ + VL ACA L+ L+ G E H VI
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVI 415
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
R+ D + L+ MY KCG AR+ FD+ ++ D A +AMI GY NG + +
Sbjct: 416 RSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDR--MRQQDSASLSAMIVGYAINGCSKES 473
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+E+F+ MQ +KP+ +FV VLSAC HAG VD+ Q F +M + + P EH+GCM+D
Sbjct: 474 LELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMID 533
Query: 296 LLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
LLGR+G DEA +LI ++P +P ++ SLL AC H N DLGE++A L + P+NP P
Sbjct: 534 LLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAP 593
Query: 355 FVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+V+LSNIYA GRW+D+G +R + DR++ K G S
Sbjct: 594 YVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKLGCS 629
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 158/309 (51%), Gaps = 21/309 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF S++ AC L L + H +K +S+ +G LVDMY K GC+ A
Sbjct: 163 QPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARE 219
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R++++WN MIAG + NG E A++LF+ + K D TWN+M++G++Q G
Sbjct: 220 LFDKMP-QRDVVSWNAMIAGYVQNGLIEDALKLFQEIP----KRDVITWNTMMAGYAQCG 274
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LFEKM +V + + + A KL + ++
Sbjct: 275 DVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKL--------FQIMPERNVISWN 326
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A+IS + + GQ A + F+ P+ + WNAMI+GY +NG+ E+A+++F MQ
Sbjct: 327 AVISGFAQNGQVEEALKL---FKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVD 383
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KPN+ +F VL AC +++ + ++ G + +V + + G +++A
Sbjct: 384 MKPNTETFAIVLPACAALAVLEQGNEAHEVVIRS-GFQSDVLVGNTLVGMYAKCGSIEDA 442
Query: 307 RELIRELPE 315
R++ + +
Sbjct: 443 RKVFDRMRQ 451
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 153/345 (44%), Gaps = 59/345 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-SDTMIGTALVDMYLKCGCLPCAHN 67
P+S T+ S++ C + L + +H ++ + + D +G LV +Y+K G L A
Sbjct: 62 PHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARR 121
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ +N+++W MIA + ++A+ F + G +P+ T+
Sbjct: 122 VFDEMP-VKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTF----------- 169
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
S+L AC DL L E H +++ + +
Sbjct: 170 ------------------------ASILPACTDLEVL---GEFHDEIVKGGFESNVFVGN 202
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY K G +AR FD+ + D WNAMI+GY +NG E A+++F QE
Sbjct: 203 GLVDMYAKRGCIEFARELFDKMPQR--DVVSWNAMIAGYVQNGLIEDALKLF----QEIP 256
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDE 305
K + ++ +++ G V+ A+++F M P+Q + M+ ++G + E
Sbjct: 257 KRDVITWNTMMAGYAQCGDVENAVELFEKM-------PEQNLVSWNTMIAGYVQNGSVKE 309
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
A +L + +PE V +++++ + E A+KL + PE
Sbjct: 310 AFKLFQIMPERNVISWNAVISG----FAQNGQVEEALKLFKTMPE 350
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 120/248 (48%), Gaps = 16/248 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ TF V+ ACA+L L+ G + H + ++ QSD ++G LV MY KCG + A
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++ + + MI G +NG S++++ELFE + G KPD T+ ++S G
Sbjct: 445 VFDRMR-QQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAG 503
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVL--SACADLSALKLGKETHGHVIRADLNK 181
+ E + F+ M + + P+++ C+ +L + C D E + + + +
Sbjct: 504 LVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFD--------EANDLINKMPIKP 555
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D M +L+S + + P +PA + + + Y G ++ + +
Sbjct: 556 DADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRN 615
Query: 241 LMQQEKVK 248
M+ KVK
Sbjct: 616 RMKDRKVK 623
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
+ ++ + G EA + + M G+ P S+L C + +L K H H+I+
Sbjct: 33 DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92
Query: 177 ADLN-KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+D S+ L+S+Y+K G ARR FD+ +K + W AMI+ Y R+ + A
Sbjct: 93 TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVK--NVVSWTAMIAAYARHEHGQEA 150
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQEHFGC 292
+ F MQ ++PN +F ++L AC L++ D+ G +
Sbjct: 151 LGFFYEMQDVGIQPNHFTFASILPAC-------TDLEVLGEFHDEIVKGGFESNVFVGNG 203
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+VD+ + G ++ AREL ++P+ V +++++ ++ + L E+ QE+ +
Sbjct: 204 LVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAG---YVQNGLIEDALKLFQEIPKRDV 260
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+ + YA G E+ + + + ++ L + AG
Sbjct: 261 ITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAG 300
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 157/451 (34%), Positives = 241/451 (53%), Gaps = 70/451 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S+T +S++ A A + L+ GR +HG +++ +S + TALVDMY KCG + A
Sbjct: 273 RPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARL 332
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK----------------- 110
+F + G + +++WN+MI G + NG AME+F+ + E +
Sbjct: 333 IFDRMTG-KTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLG 391
Query: 111 ------------------PDPATWNSMISGFS---------------------------- 124
D + NS+IS +S
Sbjct: 392 DVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMIL 451
Query: 125 ---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q G EA F KMQ + P + SV+ A A+LS L K HG VIR L+K
Sbjct: 452 GYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDK 511
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +ATAL+ MY KCG AR+ FD + + WNAMI GYG +G ++A+E+F+
Sbjct: 512 NVFVATALVDMYAKCGAVHTARKLFDMMDER--HVTTWNAMIDGYGTHGLGKAALELFEK 569
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++E +KPN +F+ VLSAC H+G V++ Q F M D+GL+P +H+G MVDLLGR+
Sbjct: 570 MKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRAN 629
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RL+EA + I+++P EP +SV+ ++LGAC H N +LGE+ A ++ +++P++ V+L+N
Sbjct: 630 RLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLAN 689
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
IYA W+ V R+R + + + K PG S
Sbjct: 690 IYATASMWDKVARVRTTMEKKGIQKTPGWSV 720
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 41/348 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P F ++ C L+ G+++H + S+ T +V+MY KC + A+
Sbjct: 172 RPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYK 231
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D WN++ISG++Q G
Sbjct: 232 MFDRMP------------------------------------ERDLVCWNTIISGYAQNG 255
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +L +MQ G P + S+L A AD+ +L++G+ HG+ +RA +++T
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVST 315
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD+ K WN+MI GY +NG+ +A+EIF M E+V
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKT--VVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQV 373
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + + + L AC G V++ + ++ D L ++ + + R+D A
Sbjct: 374 EMTNVTVMGALHACADLGDVEQGRFVHKLL-DQLELGSDVSVMNSLISMYSKCKRVDIAA 432
Query: 308 ELIRELPEPTVSVYHSLL--GACWCHLNSDLGEEMAMKLQEMEPENPT 353
E+ L T+ +++++ A +N + M+LQ ++P++ T
Sbjct: 433 EIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFT 480
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+++M+ G+++ +A F +M+ G+ P + T +L C D + L+ GKE H +I
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ T +++MY KC A + FD+ + D WN +ISGY +NG ++A
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPER--DLVCWNTIISGYAQNGFGKTA 260
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+E+ MQ+E +P+S + V++L A G + +++ ++M G + +
Sbjct: 261 LELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRA---GFESFVNVSTAL 317
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
VD+ + G + AR + + TV ++S++
Sbjct: 318 VDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 273 bits (699), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 232/390 (59%), Gaps = 15/390 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI-GTALVDMYLKCGCLPCAHN 67
P+ VT SV+SACA L + GRQVH +K ++ D M+ ALVDMY KCG A
Sbjct: 250 PDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARC 309
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + SR+I++ +++ G + E A +F + + WN +I+ ++Q G
Sbjct: 310 IFDSMP-SRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNV----IAWNVLIAAYAQNG 364
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD---ES 184
EA +LF +++ + P+ +VL+AC +++ L+LG++ H HV++ D ES
Sbjct: 365 EEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPES 424
Query: 185 ---MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+ MY+K G + F++ + D WNAMI GY +NG + A+ +F+
Sbjct: 425 DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGYAQNGRAKDALHLFER 482
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M P+S + + VLSACGH+G VD+ + F M +D G+ P ++H+ CMVDLLGR+G
Sbjct: 483 MLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAG 542
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L EA ELI ++P EP ++ SLLGAC H N +LGE A +L E++P+N P+V+LSN
Sbjct: 543 HLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSN 602
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA +G+W +V R+R+ + DR ++K PG S
Sbjct: 603 MYAEMGKWAEVFRVRRSMKDRGVSKQPGCS 632
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 150/339 (44%), Gaps = 71/339 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F S +SACA+ + G QVHGL + D I +ALVDMY KC A VF
Sbjct: 150 NAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVF 209
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RN+++WN++I NG +A+ LF + GF PD T
Sbjct: 210 DAMP-ERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVT-------------- 254
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
++SV+SACA L+A + G++ H H+++ D L D + A
Sbjct: 255 ---------------------LSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNA 293
Query: 189 LISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAFW 219
L+ MY KCG+ AR FD ++ + W
Sbjct: 294 LVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAW 353
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N +I+ Y +NGE E A+ +F ++++ + P ++ VL+ACG+ + Q +
Sbjct: 354 NVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLK 413
Query: 280 D---FGLKPKQEHF--GCMVDLLGRSGRLDEARELIREL 313
+ F P+ + F +VD+ ++G +D+ ++ +
Sbjct: 414 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 452
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 12/350 (3%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L R H LK +T + LV Y + G L A VF E+ RN ++N +++
Sbjct: 33 LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIP-LRNTFSYNALLS 91
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ--LGMRFEAFKLFEKMQSTGM 144
GR ++A LFE + PD ++N++++ ++ G +A + M +
Sbjct: 92 AYARLGRPDEARALFEAIP----DPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDF 147
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
V + S LSACA + G++ HG V R+ D + +AL+ MY KC +P ARR
Sbjct: 148 VLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARR 207
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FD + + WN++I+ Y +NG A+ +F M P+ + +V+SAC
Sbjct: 208 VFDAMPER--NVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAGL 265
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
+ Q+ M L+ +VD+ + GR EAR + +P ++ S+
Sbjct: 266 AADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSI 325
Query: 325 LGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
L + S E+ + +M +N + +L YA G E+ R+
Sbjct: 326 LTG---YAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRL 372
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQV-------HGLTLKIEKQSDTMIGTALVDMY 56
C ++ P+SVT I V+SAC + GR+ HG+T + T +VD+
Sbjct: 485 CSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHY------TCMVDLL 538
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G L A + ++ + + W +++ L+ K +EL E A F+ DP
Sbjct: 539 GRAGHLKEAEELINDMPMEPDSVLWASLLGACRLH----KNVELGEWTAGRLFELDPQNS 594
Query: 117 NSMI---SGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + ++++G E F++ M+ G+ C
Sbjct: 595 GPYVLLSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGC 631
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 223/386 (57%), Gaps = 11/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P S TF ++ AC + + + GRQ+HG T+ + D +G +++DMY+KCG L C
Sbjct: 144 PVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRK 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ +R++++W +I+ + +G E A ELF+GL + D W M+SGF+Q
Sbjct: 204 VFDEMP-NRDVISWTELISAYVKSGNMESAGELFDGLPVK----DMVAWTVMVSGFAQNA 258
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-- 185
EA FEKMQ G+ + V+SACA L A K +++ S+
Sbjct: 259 KPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVV 318
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ALI MY KCG A R F +K + +++MI G+ +G A+++FD M +
Sbjct: 319 GSALIDMYSKCGSVGDAYRVFQG--MKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKT 376
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++KPN +F+ VL+AC HAG V++ QIF +M+ +G+KP +H+ CMVDLLGR+GRL E
Sbjct: 377 EIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQE 436
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A EL++ +P EP V+ +LLGAC H + D+ A L E+EP +++L+NIYA
Sbjct: 437 AHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYAS 496
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV +R+++ R L K P S
Sbjct: 497 CGRWNDVSTVRKLMRTRGLRKNPAFS 522
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 14/252 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCA 65
E + +T I VISACA L ++ + + K E + ++G+AL+DMY KCG + A
Sbjct: 276 ETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDA 335
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VFQ +K RN+ ++++MI G ++GR AM+LF+ + KP+ T+ +++ S
Sbjct: 336 YRVFQGMK-ERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSH 394
Query: 126 LGMRFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
GM + +++FE M+ G+ PS C+ +L L +E H V +
Sbjct: 395 AGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRL------QEAHELVKTMPIEP 448
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ AL+ P A + FE++P + + + Y G + +
Sbjct: 449 HGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRK 508
Query: 241 LMQQEKVKPNSA 252
LM+ ++ N A
Sbjct: 509 LMRTRGLRKNPA 520
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+P +N++I G+ E+ + + M+ G+VP T++ AC + LG++
Sbjct: 109 PNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQI 168
Query: 171 HGH-VIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
HG ++ +D + ++I MY+KCG R+ FD+
Sbjct: 169 HGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGN 228
Query: 209 -------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
F+ P D W M+SG+ +N + A+ F+ MQ+ V+ + + + V+SA
Sbjct: 229 MESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISA 288
Query: 261 CGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G A I + + +FG K ++D+ + G + +A + + + E V
Sbjct: 289 CAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVY 348
Query: 320 VYHSLL 325
Y S++
Sbjct: 349 SYSSMI 354
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 13/182 (7%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP--SWARRFFDQ 208
+ + L C +L+ +K + H ++ L++ + LI K P + F+Q
Sbjct: 49 IVTTLDGCKNLTQIK---QVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ +P +NA+I GY + + E + LM++E V P S +F A+ ACG V
Sbjct: 106 --VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVG 163
Query: 269 KALQIF--TMMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
QI T++ FG + H G M+D+ + G L+ R++ E+P V + L+
Sbjct: 164 LGRQIHGQTILVGGFG---EDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELI 220
Query: 326 GA 327
A
Sbjct: 221 SA 222
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 273 bits (699), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 227/385 (58%), Gaps = 9/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT + V+SACA L L+FGR V + + D + A++DMY KCG + A +
Sbjct: 225 PNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKL 284
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R++ +W M+ G G + A +F + + + A WN +IS + Q G
Sbjct: 285 FDEMP-ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVK----EIAAWNVLISAYEQNGK 339
Query: 129 RFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F ++Q + + P + S LSACA L A+ LG H ++ R + + + +
Sbjct: 340 PKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLIS 399
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG A F + ++ D W+AMI+G G +G ++A+++F MQ+ KV
Sbjct: 400 SLVDMYAKCGSLEKALEVF--YSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKV 457
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPNS +F VL AC HAG VD+ F M+ +G+ P+ +H+ CMVD+LGR+G L+EA
Sbjct: 458 KPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAM 517
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI E+ P+ SV+ +LLGAC H+N +LGE + +L ++EP N V+LSNIYA G
Sbjct: 518 ELINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTG 577
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RWE V +R+++ D +L K PG S+
Sbjct: 578 RWEKVSELRKLMRDTELKKEPGCSS 602
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 175/401 (43%), Gaps = 73/401 (18%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D PN TF VI A + L + G VHG+ +K+ D I +LV Y CG L A
Sbjct: 122 DLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAE 181
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
LF+G++ + D +WNSMIS F+Q
Sbjct: 182 --------------------------------RLFKGISCK----DVVSWNSMISAFAQG 205
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A +LF KM+ ++P+ + VLSACA L+ G+ ++ R + D ++
Sbjct: 206 NCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLC 265
Query: 187 TALISMYMKCGQPSWARRFFDQ----------------------------FEIKP-DDPA 217
A++ MY KCG A++ FD+ F P + A
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKV-KPNSASFVAVLSACGHAGHVDKALQIFTM 276
WN +IS Y +NG+ + A+ IF+ +Q K+ KP+ + V+ LSAC G +D I
Sbjct: 326 AWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVY 385
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
+ + G+ +VD+ + G L++A E+ + E V V+ +++ H
Sbjct: 386 IKRE-GIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKA 444
Query: 337 GEEMAMKLQEMEPE-NPTPF--VILSNIYAGLGRWEDVGRI 374
++ ++QE + + N F V+ + +AGL D GR+
Sbjct: 445 AIDLFFEMQEAKVKPNSVTFTNVLCACSHAGL---VDEGRV 482
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 82/206 (39%), Gaps = 13/206 (6%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALI--SMYMKCGQPSWARRFFDQFEI 211
+LS S+ K KE H ++R L D A+ L S +AR FDQ I
Sbjct: 28 ILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARNLFDQ--I 85
Query: 212 KPDDPAFWNAMISGYGRNGE-YESAVEIFDLMQQEKVKPNSASFVAVLSACGH--AGHVD 268
+ WN +I Y + + ++S V DL+ + + PN +F V+ A A V
Sbjct: 86 PQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVG 145
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
A+ + FG+ +V G G L A L + + V ++S++ A
Sbjct: 146 TAVHGMA-IKLSFGMDLYI--LNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISA- 201
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTP 354
+ E+ +ME EN P
Sbjct: 202 --FAQGNCPEDALELFLKMERENVMP 225
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 228/417 (54%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ V+ A + L G Q+H +++ + +G L+ MY KCGCL A
Sbjct: 134 DPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
V ++ R++++WN+++AG NG+ + A+E+ + + G KPD T
Sbjct: 194 VLDQMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 252
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN MI+ + M EA +F +M+ + P + SV
Sbjct: 253 LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASV 312
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC DLSAL LG+ H +V+R L + + ALI MY KCG +AR FDQ + +
Sbjct: 313 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-- 370
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W +MIS YG NG+ AV +F MQ + P+S +FV+VLSAC HAG +D+ F
Sbjct: 371 DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYF 430
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M ++ + P+ EHF CMVDLLGR+G++DEA I+++P EP V+ +LL AC + N
Sbjct: 431 KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 490
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G A +L ++ PE +V+LSNIYA GRWEDV +R ++ + + K+PG+S
Sbjct: 491 MIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVS 547
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + +N MI + + +A +F+ M G+ P VL A + L +G +
Sbjct: 99 KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 158
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V+R L+ + + LISMY KCG A R DQ + D WN++++G RN
Sbjct: 159 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCR--DVVSWNSLVAGCARN 216
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
G+++ A+E+ M+ +KP++ + ++L A
Sbjct: 217 GQFDDALEVCKEMELLGLKPDAGTMASLLPA 247
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 164 LKLGKETHGHV-IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+K K+ H + I DL+ + S+ L+ Y CG+P R FD EI + F+N M
Sbjct: 51 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFD--EIPKKNVVFFNVM 108
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I Y N Y A+ +F M + P+ ++ VL A + + +QI + G
Sbjct: 109 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAV-VRVG 167
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
L ++ + G+ G L EA ++ ++P V ++SL+ C
Sbjct: 168 LDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGC 213
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 228/382 (59%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V +S +SACA+LL + G+ +H L+LKI +S + AL+ MY KCG + A +F
Sbjct: 240 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 299
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E ++++WN+MI+G + + A +F+ + + D +W+SMISG++Q +
Sbjct: 300 DE-AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP----EKDVVSWSSMISGYAQNDLF 354
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF++MQ +G P + SV+SACA L+AL+ GK H ++ R L + + T L
Sbjct: 355 DETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 414
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MYMKCG A F + + + WNA+I G NG ES++++F M++ V P
Sbjct: 415 IDMYMKCGCVETALEVF--YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 472
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F+ VL AC H G VD+ F M D ++P +H+GCMVDLLGR+G+L EA EL
Sbjct: 473 NEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEEL 532
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ +P P V+ + +LLGAC H +S++G + KL E++P++ V+LSNIYA G+W
Sbjct: 533 LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKW 592
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+DV IR M+ ++ K+PG S
Sbjct: 593 DDVLEIRGMMTKHRVLKIPGCS 614
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 58/372 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T+ +I AC+ +QVH LK+ SD + L++ + C + A VF
Sbjct: 77 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 136
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFE--------------------GLAHEGF 109
E + ++WN+++AG + G E+A ++ GL E
Sbjct: 137 NE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEAC 195
Query: 110 K-------PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
K D TW+++I+ F Q M EA + F M G++ S LSACA+L
Sbjct: 196 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 255
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-------------- 208
+ +GK H ++ ++ ALI MY KCG AR+ FD+
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 209 --------------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
F+ P+ D W++MISGY +N ++ + +F MQ KP+ +
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 375
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V+V+SAC +++ + + + GL ++D+ + G ++ A E+ +
Sbjct: 376 LVSVISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM 434
Query: 314 PEPTVSVYHSLL 325
E +S +++L+
Sbjct: 435 IEKGISTWNALI 446
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +SVISACA L L+ G+ VH + + ++GT L+DMY+KCGC+ A
Sbjct: 370 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 429
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + I TWN +I G+ +NG E ++++F + P+ T+ ++ +G
Sbjct: 430 VFYGMI-EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 488
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F M + P++K C+ +L L +E + R + D
Sbjct: 489 LVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL------QEAEELLNRMPMTPDV 542
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ K G RR + E++PD F + + Y G+++ +EI +M
Sbjct: 543 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 602
Query: 243 QQEKV 247
+ +V
Sbjct: 603 TKHRV 607
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN MI + Q AF L++ M S + ++ AC+ + K+ H HV+
Sbjct: 46 WNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVL 105
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + D + LI+ + C + A R F++ + D WN++++GY G E A
Sbjct: 106 KLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVL--DSVSWNSILAGYIEIGNVEEA 163
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
I+ M + + +++ V G G V +A ++F M
Sbjct: 164 KHIYHQMPERSIIASNSMIVLF----GMRGLVVEACKLFDEM 201
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/389 (37%), Positives = 228/389 (58%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACA---SLLYLQFGRQVHGLTLKIEKQ-SDTMIGTALVDMYLKCGCLP 63
EPN +TFI+++SACA S + FG +H K+ +D M+GTAL+DMY KCG +
Sbjct: 88 EPNHITFITLLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVE 147
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A F ++ G RN+++WNTMI G M NG+ E A+++F+GL + + +W ++I GF
Sbjct: 148 SARLAFDQM-GVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVK----NAISWTALIGGF 202
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ EA + F +MQ +G+ P V +V++ACA+L L LG H V+ D +
Sbjct: 203 VKKDYHEEALECFREMQLSGVAPDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNV 262
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++ +LI MY +CG AR+ FD+ + WN++I G+ NG + A+ F+ MQ
Sbjct: 263 KVSNSLIDMYSRCGCIDLARQVFDRMPQRT--LVSWNSIIVGFAVNGLADEALSYFNSMQ 320
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+E KP+ S+ L AC HAG + + L+IF M + P+ EH+GC+VDL R+GRL
Sbjct: 321 EEGFKPDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRL 380
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+EA +++ +P +P + SLL AC N L E + L E++ + +V+LSNIY
Sbjct: 381 EEALNVLKNMPMKPNEVILGSLLAACRTQGNIGLAENVMNYLIELDSGGDSNYVLLSNIY 440
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +G+W+ ++R+ + +R + K PG S+
Sbjct: 441 AAVGKWDGANKVRRRMKERGIQKKPGFSS 469
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 123/259 (47%), Gaps = 41/259 (15%)
Query: 104 LAHEGFKPDP-ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL- 161
L H DP +W + I+ + + G +A F +M+ + P+ ++LSACA
Sbjct: 46 LRHTTKYNDPIVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYP 105
Query: 162 --SALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
S++ G H HV + L+ ++ M TALI MY KCG+ AR FDQ ++ +
Sbjct: 106 SRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVR--NLVS 163
Query: 219 WNAMISGYGRNGEYESAVEIFD-------------------------------LMQQEKV 247
WN MI GY RNG++E A+++FD MQ V
Sbjct: 164 WNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGV 223
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ + +AV++AC + G + L + + M DF K + ++D+ R G +D A
Sbjct: 224 APDYVTVIAVIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSN--SLIDMYSRCGCIDLA 281
Query: 307 RELIRELPEPTVSVYHSLL 325
R++ +P+ T+ ++S++
Sbjct: 282 RQVFDRMPQRTLVSWNSII 300
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/382 (38%), Positives = 228/382 (59%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V +S +SACA+LL + G+ +H L+LKI +S + AL+ MY KCG + A +F
Sbjct: 375 DEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLF 434
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E ++++WN+MI+G + + A +F+ + + D +W+SMISG++Q +
Sbjct: 435 DE-AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEK----DVVSWSSMISGYAQNDLF 489
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF++MQ +G P + SV+SACA L+AL+ GK H ++ R L + + T L
Sbjct: 490 DETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTL 549
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MYMKCG A F + + + WNA+I G NG ES++++F M++ V P
Sbjct: 550 IDMYMKCGCVETALEVF--YGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTP 607
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F+ VL AC H G VD+ F M D ++P +H+GCMVDLLGR+G+L EA EL
Sbjct: 608 NEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEEL 667
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ +P P V+ + +LLGAC H +S++G + KL E++P++ V+LSNIYA G+W
Sbjct: 668 LNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKW 727
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+DV IR M+ ++ K+PG S
Sbjct: 728 DDVLEIRGMMTKHRVLKIPGCS 749
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 161/372 (43%), Gaps = 58/372 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T+ +I AC+ +QVH LK+ SD + L++ + C + A VF
Sbjct: 212 DNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVF 271
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFE--------------------GLAHEGF 109
E + ++WN+++AG + G E+A ++ GL E
Sbjct: 272 NE-SSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEAC 330
Query: 110 K-------PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
K D TW+++I+ F Q M EA + F M G++ S LSACA+L
Sbjct: 331 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 390
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-------------- 208
+ +GK H ++ ++ ALI MY KCG AR+ FD+
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 209 --------------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
F+ P+ D W++MISGY +N ++ + +F MQ KP+ +
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETT 510
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V+V+SAC +++ + + + GL ++D+ + G ++ A E+ +
Sbjct: 511 LVSVISACARLAALEQGKWVHAYIKRN-GLTINVILGTTLIDMYMKCGCVETALEVFYGM 569
Query: 314 PEPTVSVYHSLL 325
E +S +++L+
Sbjct: 570 IEKGISTWNALI 581
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 117/245 (47%), Gaps = 12/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +SVISACA L L+ G+ VH + + ++GT L+DMY+KCGC+ A
Sbjct: 505 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 564
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + I TWN +I G+ +NG E ++++F + P+ T+ ++ +G
Sbjct: 565 VFYGMI-EKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 623
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F M + P++K C+ +L L +E + R + D
Sbjct: 624 LVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKL------QEAEELLNRMPMTPDV 677
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ K G RR + E++PD F + + Y G+++ +EI +M
Sbjct: 678 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 737
Query: 243 QQEKV 247
+ +V
Sbjct: 738 TKHRV 742
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
AF L++ M S + ++ AC+ + K+ H HV++ + D + LI+
Sbjct: 197 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLIN 256
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
+ C + A R F++ + D WN++++GY G E A I+ M + + ++
Sbjct: 257 CFSVCSNMTDACRVFNESSVL--DSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASN 314
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMM 277
+ V G G V +A ++F M
Sbjct: 315 SMIVLF----GMRGLVVEACKLFDEM 336
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 220/383 (57%), Gaps = 7/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF + +C S ++ GRQ+HG LK D I L+ +Y CGC+ A ++
Sbjct: 106 PDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHL 165
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ R++++WN +++ G E A G E + +WN+MI+G+S G
Sbjct: 166 LDRML-ERDVVSWNALLSAYAERGLMELASRRVFG---ETPVKNVVSWNAMITGYSHAGR 221
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E LFE MQ G+ P + SVLSACA + AL G+ H ++ + ++ D +ATA
Sbjct: 222 FSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATA 281
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A F+ K D + WN++ISG +G + A++IF M E K
Sbjct: 282 LVDMYSKCGSIEKALEVFNSCLRK--DISTWNSIISGLSTHGSGQHALQIFSEMLVEGFK 339
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV VLSAC AG +D+ ++F +M G++P EH+GCMVDLLGR G L+EA E
Sbjct: 340 PNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEE 399
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++++P+ S V+ SLLGAC H N +L E +A KL E+ P+ + FV LSN+YA +GR
Sbjct: 400 LVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGR 459
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV +RQ + + + K PG S
Sbjct: 460 WKDVMEVRQKMRAQGVRKDPGCS 482
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 120/302 (39%), Gaps = 71/302 (23%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+P AH++F + N WNT+I + E A+ +F + H PD T+
Sbjct: 58 IPYAHSIFSRIPNP-NSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTF----- 111
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
T L +C S ++ G++ HGHV++ L
Sbjct: 112 ------------------------------TFALKSCGSFSGVEEGRQIHGHVLKTGLGD 141
Query: 182 DESMATALISMYMKCG----------------QPSW----------------ARRFFDQF 209
D + LI +Y CG SW +RR F +
Sbjct: 142 DLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGET 201
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+K + WNAMI+GY G + + +F+ MQ VKP++ + V+VLSAC H G + +
Sbjct: 202 PVK--NVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQ 259
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+ +D + G+ +VD+ + G +++A E+ +S ++S++
Sbjct: 260 GEWVHAYIDKN-GISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLS 318
Query: 330 CH 331
H
Sbjct: 319 TH 320
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 8/246 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T +SV+SACA + L G VH K D + TALVDMY KCG + A
Sbjct: 238 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++I TWN++I+G+ +G + A+++F + EGFKP+ T+ ++S S+ G
Sbjct: 298 VFNSCL-RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAG 356
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E ++F M G+ P+++ ++ + L+ +E +++ K+ S+
Sbjct: 357 LLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEE----LVQKMPQKEASVV 412
Query: 187 -TALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+L+ G A R + E+ P + + + + + Y G ++ +E+ M+
Sbjct: 413 WESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRA 472
Query: 245 EKVKPN 250
+ V+ +
Sbjct: 473 QGVRKD 478
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 235/414 (56%), Gaps = 39/414 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI---------------------------- 40
PN T+ ++ AC + + G QVH +K
Sbjct: 128 PNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRM 187
Query: 41 ---EKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
+ SD + A++D YLKCG + A +F ++ +N+ +WN M++GM G E+A
Sbjct: 188 LGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSME-DKNVGSWNVMVSGMAKCGMIEEA 246
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
ELF +E + + +W++MI G+ + G EA ++F MQ + P ++SVL+A
Sbjct: 247 RELF----NEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAA 302
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA+L AL G+ H +V + D + TAL+ MY KCG+ A F++ E K +
Sbjct: 303 CANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKK--EVF 360
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAMI G G +G E A+E+F MQ++K +PN + + VLSAC H+G VD+ L+IF M
Sbjct: 361 TWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSM 420
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
++ +G++P EH+GC+VDLLGR+G L EA E++ +P EP+ +V+ +LLGAC H + +L
Sbjct: 421 EEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVEL 480
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
GE + L E+EP+N + +LSNIYA GRW+DV +R+++ +R + GIS
Sbjct: 481 GERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGIS 534
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 136/326 (41%), Gaps = 69/326 (21%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
A+++FE + + P+ +N +I G Q +A + KM P+ ++
Sbjct: 83 ALKVFEYVPN----PNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFK 138
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISM------------------------ 192
AC A + G + H HVI+ L+ D + +A I M
Sbjct: 139 ACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVIC 198
Query: 193 -------YMKCGQPSWARRFFDQFE-----------------------------IKPDDP 216
Y+KCG+ A+ F E +K +
Sbjct: 199 FNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNE 258
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W+AMI GY + G Y+ A+E+F++MQ+E+++P +VL+AC + G +D+ I
Sbjct: 259 ISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAY 318
Query: 277 MDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
++++ G +VD+ + GRLD A ++ ++ + V +++++ H ++
Sbjct: 319 VNNN--SNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAE 376
Query: 336 LGEEMAMKLQEME--PENPTPFVILS 359
E+ K+Q+ + P T +LS
Sbjct: 377 DAIELFFKMQKQKFRPNGITLLGVLS 402
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 228/417 (54%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ V+ A + L G Q+H +++ + +G L+ MY KCGCL A
Sbjct: 1123 DPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACR 1182
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
V Z+ R++++WN+++AG NG+ + A+E+ + + G KPD T
Sbjct: 1183 VLDZMP-CRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 1241
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN MI+ + M EA +F +M+ + P + SV
Sbjct: 1242 LDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASV 1301
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC DLSAL LG+ H +V+R L + + ALI MY KCG +AR FDQ + +
Sbjct: 1302 LPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFR-- 1359
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W +MIS YG NG+ AV +F MQ + P+S +FV+VLSAC HAG +D+ F
Sbjct: 1360 DVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYF 1419
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M ++ + P+ EHF CMVDLLGR+G++DEA I+++P EP V+ +LL AC + N
Sbjct: 1420 KLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSN 1479
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G A +L ++ PE +V+LSNIYA GRWEDV +R ++ + + K+PG+S
Sbjct: 1480 MIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVS 1536
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + +N MI + + +A +F+ M G+ P VL A + L +G +
Sbjct: 1088 KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 1147
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V+R L+ + + LISMY KCG A R DZ + D WN++++G RN
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCR--DVVSWNSLVAGCARN 1205
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
G+++ A+E+ M+ +KP++ + ++L A
Sbjct: 1206 GQFDDALEVCKEMELLGLKPDAGTMASLLPA 1236
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 164 LKLGKETHGHV-IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+K K+ H + I DL+ + S+ L+ Y CG+P R FD EI + F+N M
Sbjct: 1040 IKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFD--EIPKKNVVFFNVM 1097
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I Y N Y A+ +F M + P+ ++ VL A + + +QI + G
Sbjct: 1098 IRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAV-VRVG 1156
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
L ++ + G+ G L EA ++ Z+P V ++SL+ C
Sbjct: 1157 LDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGC 1202
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/415 (37%), Positives = 224/415 (53%), Gaps = 32/415 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN T+ V+ AC+ LL ++ G ++H +SD + TALVD Y KCG L
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVE 162
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--------- 115
A +F + R+++ WN MIAG L G + A++L + EG P+ +T
Sbjct: 163 AQRLFSSMS-HRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQ 221
Query: 116 -------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
W++MI G+ EA +F MQ +G+ P L + VL
Sbjct: 222 CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLP 281
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
AC+ L+AL+ G +HG++I D + ALI MY KCG+ S+AR F++ + D
Sbjct: 282 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD--RHDI 339
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
WNAMI GYG +G A+ +F + +KP+ +F+ +LS+C H+G V + F
Sbjct: 340 VSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDA 399
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSD 335
M DF + P+ EH CMVD+LGR+G +DEA IR +P EP V ++ +LL AC H N +
Sbjct: 400 MSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIE 459
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
LGEE++ K+Q + PE+ FV+LSNIY+ GRW+D IR D L K+PG S
Sbjct: 460 LGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCS 514
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ ++ AC L +++H LK +D+ + L +YL C + A +F E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRF 130
P+P+ WN +I ++ G
Sbjct: 70 --------------------------------------PNPSVILWNQIIRAYAWNGPFD 91
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A L+ M G+ P+ VL AC+ L A++ G E H H L D + TAL+
Sbjct: 92 GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALV 151
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
Y KCG A+R F + D WNAMI+G G + AV++ MQ+E + PN
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 251 SASFVAVLSAC 261
S++ V VL C
Sbjct: 210 SSTIVGVLPTC 220
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 3/193 (1%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L AC +L K+ H H ++ N D S+ L +Y+ C Q ARR FD EI
Sbjct: 14 LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD--EIPN 71
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
WN +I Y NG ++ A++++ M V+PN ++ VL AC ++ ++I
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+ FGL+ +VD + G L EA+ L + V +++++ C +
Sbjct: 132 HSHA-KMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190
Query: 334 SDLGEEMAMKLQE 346
D ++ M++QE
Sbjct: 191 CDDAVQLIMQMQE 203
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 224/388 (57%), Gaps = 11/388 (2%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++SACA F +HG K + M+GTAL+DMY KC L
Sbjct: 89 EPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGH 148
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF L G +N ++WNTM+ G M NG E A++LF+ + D +W ++I+G
Sbjct: 149 ARKVFYNL-GVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTR----DAISWTALINGLL 203
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G +A + F +MQ +G+ + +VL+ACADL AL LG H V+ + +
Sbjct: 204 KHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIK 263
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI MY +CG +AR+ F ++ WN++I G+ NG + ++E F MQ+
Sbjct: 264 ISNSLIDMYSRCGCIEFARQVF--VKMAKRTLVSWNSIIVGFAVNGFADESLEFFXAMQK 321
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP+ S+ L+AC HAG V+K L++F M + P+ EH+GC+VDL GR+GRL+
Sbjct: 322 EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLE 381
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A +I E+P +P V SLL AC H + +L E + L +++PE +V+LSNIYA
Sbjct: 382 DALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYA 441
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+W+ +R+ + R + K PG S+
Sbjct: 442 AIGKWDGANNVRRTMKARGVQKKPGYSS 469
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 43/256 (16%)
Query: 109 FKP---DPAT-WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL--S 162
F P DP W S ++ + + G EA F +M+ G+ P+ ++LSACAD
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 163 ALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+ HG+ + L+ M TALI MY KC Q AR+ F +K + WN
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK--NSVSWNT 166
Query: 222 MISGYGRNGEYESAVEIFD-------------------------------LMQQEKVKPN 250
M++G+ RNGE E A+++FD MQ+ V +
Sbjct: 167 MLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAAD 226
Query: 251 SASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
S +AVL+AC G + L + +M +F K + ++D+ R G ++ AR++
Sbjct: 227 YVSIIAVLAACADLGALTLGLWVHRFVMPQEF--KDNIKISNSLIDMYSRCGCIEFARQV 284
Query: 310 IRELPEPTVSVYHSLL 325
++ + T+ ++S++
Sbjct: 285 FVKMAKRTLVSWNSII 300
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 203 RRFFDQFEIKPDDP-AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
R +F DP W + ++ Y RNG+ A F M+ V+PN +F+ +LSAC
Sbjct: 43 RNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSAC 102
Query: 262 GHAGHVDKALQIFTMMDD------DFGLKPKQEHFG-CMVDLLGRSGRLDEARELIREL 313
D + F +GL G ++D+ + +L AR++ L
Sbjct: 103 A-----DFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNL 156
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 221/417 (52%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF V+ AC+ + G+++HG K+ S +G LV MY KCG L A
Sbjct: 138 KPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
V E+ R++++WN+++AG N R + A+E+ + D T
Sbjct: 198 VLDEM-SRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 256
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN MI + + M EA +L+ M++ G P +TSV
Sbjct: 257 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSV 316
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC D SAL LGK+ HG++ R L + + ALI MY KCG AR F+ +K
Sbjct: 317 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFEN--MKSR 374
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W AMIS YG +G AV +F MQ + P+S +FV L+AC HAG +++ F
Sbjct: 375 DVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 434
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M D + + P+ EH CMVDLLGR+G++ EA + I+E+P EP V+ +LLGAC H N
Sbjct: 435 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSN 494
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+D+G A KL ++ PE +V+LSNIYA GRWE+V IR ++ + L K PG S
Sbjct: 495 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 551
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 38/238 (15%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ R VH + + + ++ +G L+ Y + A VF E+ RN++ N MI
Sbjct: 56 LKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIP-ERNVIIINVMIR 114
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
+ NG E ++F M S + P
Sbjct: 115 SYVNNG-----------------------------------FYREGIQVFGTMCSCHVKP 139
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
VL AC+ + +GK+ HG + L+ + L+SMY KCG S AR
Sbjct: 140 DHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 199
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
D E+ D WN++++GY +N ++ A+E+ M+ K+ ++ + ++L A +
Sbjct: 200 D--EMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 255
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 18/211 (8%)
Query: 128 MRFEAFKLFEKMQSTGMVPSLKC------------VTSVLSACADLSALKLGKETHGHVI 175
+ F F+ F+ + T VP L+ + VL DL L+ H +I
Sbjct: 11 LHFPEFRKFQTRKVTSSVPKLELDQKNSPKETAFMLGQVLDTYPDLKTLRT---VHSRII 67
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
DL + S+ L+ Y + AR+ FD EI + N MI Y NG Y
Sbjct: 68 SEDLRYNSSLGVKLMRAYASLKDVATARKVFD--EIPERNVIIINVMIRSYVNNGFYREG 125
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+++F M VKP+ +F VL AC +G++ +I GL +V
Sbjct: 126 IQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSA-TKVGLSSTLFVGNGLVS 184
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ G+ G L EAR ++ E+ V ++SL+
Sbjct: 185 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVA 215
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 224/388 (57%), Gaps = 11/388 (2%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++SACA F +HG K + M+GTAL+DMY KC L
Sbjct: 89 EPNHITFITLLSACADFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGH 148
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF L G +N ++WNTM+ G M NG E A++LF+ + D +W ++I+G
Sbjct: 149 ARKVFYNL-GVKNSVSWNTMLNGFMRNGEIELAIQLFDEMPTR----DAISWTALINGLL 203
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G +A + F +MQ +G+ + +VL+ACADL AL LG H V+ + +
Sbjct: 204 KHGYSEQALECFHQMQRSGVAADYVSIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIK 263
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI MY +CG +AR+ F ++ WN++I G+ NG + ++E F MQ+
Sbjct: 264 ISNSLIDMYSRCGCIEFARQVF--VKMAKRTLVSWNSIIVGFAVNGFADESLEFFYAMQK 321
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP+ S+ L+AC HAG V+K L++F M + P+ EH+GC+VDL GR+GRL+
Sbjct: 322 EGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRAGRLE 381
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A +I E+P +P V SLL AC H + +L E + L +++PE +V+LSNIYA
Sbjct: 382 DALNMIEEMPMKPNEVVLGSLLAACRTHGDVNLAERLMKHLFKLDPEGDAYYVLLSNIYA 441
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+W+ +R+ + R + K PG S+
Sbjct: 442 AIGKWDGANNVRRTMKARGVQKKPGYSS 469
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 43/256 (16%)
Query: 109 FKP---DPAT-WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL--S 162
F P DP W S ++ + + G EA F +M+ G+ P+ ++LSACAD
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 163 ALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+ HG+ + L+ M TALI MY KC Q AR+ F +K + WN
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVK--NSVSWNT 166
Query: 222 MISGYGRNGEYESAVEIFD-------------------------------LMQQEKVKPN 250
M++G+ RNGE E A+++FD MQ+ V +
Sbjct: 167 MLNGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAAD 226
Query: 251 SASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
S +AVL+AC G + L + +M +F K + ++D+ R G ++ AR++
Sbjct: 227 YVSIIAVLAACADLGALTLGLWVHRFVMPQEF--KDNIKISNSLIDMYSRCGCIEFARQV 284
Query: 310 IRELPEPTVSVYHSLL 325
++ + T+ ++S++
Sbjct: 285 FVKMAKRTLVSWNSII 300
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 203 RRFFDQFEIKPDDP-AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
R +F DP W + ++ Y RNG+ A F M+ V+PN +F+ +LSAC
Sbjct: 43 RNISSKFNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSAC 102
Query: 262 GHAGHVDKALQIFTMMDD------DFGLKPKQEHFG-CMVDLLGRSGRLDEARELIREL 313
D + F +GL G ++D+ + +L AR++ L
Sbjct: 103 A-----DFPSESFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNL 156
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 207/342 (60%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+A+V Y+ CG L A F R+++TW MI G M GR E A LF+ ++
Sbjct: 170 SAMVSGYVACGDLDAAVECFYA-APMRSVITWTAMITGYMKFGRVELAERLFQEMSMRTL 228
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
TWN+MI+G+ + G + +LF M TG+ P+ +TSVL C++LSAL+LGK+
Sbjct: 229 ----VTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQ 284
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V + L+ D + T+L+SMY KCG A F Q I D WNAMISGY ++
Sbjct: 285 VHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQ--IPRKDVVCWNAMISGYAQH 342
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G + A+ +FD M++E +KP+ +FVAVL AC HAG VD +Q F M DFG++ K EH
Sbjct: 343 GAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEH 402
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CMVDLLGR+G+L EA +LI+ +P +P ++Y +LLGAC H N +L E A L E++
Sbjct: 403 YACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELD 462
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P T +V L+N+YA RW+ V IR+ + D + K+PG S
Sbjct: 463 PTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYS 504
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 163/375 (43%), Gaps = 50/375 (13%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIGT-ALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
++ + V T + E ++ +I + L+ Y++CG + A VF+++K ++ +TWN++
Sbjct: 20 FVTLSKYVSSHTHQHEFNNNNVIASNKLIASYVRCGDIDSAVRVFEDMK-VKSTVTWNSI 78
Query: 85 IAGMMLN-GRSEKAMELFEGLAH----------------------EGF-----KPDPATW 116
+A G E A +LFE + GF D A+W
Sbjct: 79 LAAFAKKPGHFEYARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASW 138
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N+MIS +Q+G+ EA +LF M V S + S AC DL A
Sbjct: 139 NTMISALAQVGLMGEARRLFSAMPEKNCV-SWSAMVSGYVACGDLDAAV-------ECFY 190
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
A + TA+I+ YMK G+ A R F + ++ WNAMI+GY NG E +
Sbjct: 191 AAPMRSVITWTAMITGYMKFGRVELAERLFQEMSMRT--LVTWNAMIAGYVENGRAEDGL 248
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+F M + VKPN+ S +VL C + + Q+ ++ L +V +
Sbjct: 249 RLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLV-CKCPLSSDTTAGTSLVSM 307
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-- 354
+ G L +A EL ++P V +++++ + G++ EM+ E P
Sbjct: 308 YSKCGDLKDAWELFIQIPRKDVVCWNAMISG---YAQHGAGKKALRLFDEMKKEGLKPDW 364
Query: 355 ----FVILSNIYAGL 365
V+L+ +AGL
Sbjct: 365 ITFVAVLLACNHAGL 379
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 78/133 (58%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+++ SV+ C++L LQ G+QVH L K SDT GT+LV MY KCG L A
Sbjct: 260 KPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWE 319
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++++ WN MI+G +G +KA+ LF+ + EG KPD T+ +++ + G
Sbjct: 320 LFIQIP-RKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
Query: 128 MRFEAFKLFEKMQ 140
+ + F M+
Sbjct: 379 LVDLGVQYFNTMR 391
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 226/387 (58%), Gaps = 13/387 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P S TF ++ AC + L + G+QVH T+ I SD +G +++D+Y+KCG L CA
Sbjct: 140 PVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARK 199
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++W +I G E A LF+ L + D W +M++G++Q G
Sbjct: 200 VFDEMS-ERDVVSWTELIVAYAKYGDMESASGLFDDLPSK----DMVAWTAMVTGYAQNG 254
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-- 185
EA + F+KMQ GM + V+SACA L A+K R+ ++
Sbjct: 255 RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVV 314
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQ 244
+ALI MY KCG P A + FE+ + F +++MI GY +G SA+++F M +
Sbjct: 315 GSALIDMYSKCGSPDEA---YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK 371
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+++PN +F+ +LSAC HAG V++ Q+F M+ FG+ P +H+ CMVDLLGR+G L+
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA +L++ +P EP V+ +LLGAC H N D+ + A +L ++EP +++LSNIYA
Sbjct: 432 EALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYA 491
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWE+V ++R++I ++ K PG S
Sbjct: 492 SAGRWEEVSKLRKVIREKGFKKNPGCS 518
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 121/289 (41%), Gaps = 34/289 (11%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+P W +MI G++ G+ E+ + +M+ G+ P +++ AC + LGK+
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 171 HGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQF-------------------- 209
H I D + ++I +Y+KCG AR+ FD+
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 210 ---------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
++ D W AM++GY +NG + A+E F MQ ++ + + V+SA
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 261 CGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G V A I + + FG ++D+ + G DEA ++ + E V
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 320 VYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSNI-YAGL 365
Y S++ H +S L M E+ P T ILS +AGL
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
E + VT VISACA L ++ + + + + ++G+AL+DMY KCG A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VF+ +K RN+ ++++MI G ++GR+ A++LF + +P+ T+ ++S S
Sbjct: 332 YKVFEVMK-ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSH 390
Query: 126 LGMRFEAFKLFEKMQS-TGMVPS---LKCVTSVLSACADL-SALKLGKETHGHVIRADLN 180
G+ + +LF KM+ G+ PS C+ +L L AL L K +
Sbjct: 391 AGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM-------PME 443
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ + AL+ G P A+ ++ F+++P+ + + + Y G +E ++
Sbjct: 444 PNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLR 503
Query: 240 DLMQQEKVKPN 250
+++++ K N
Sbjct: 504 KVIREKGFKKN 514
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L C S +K + H H+IR L++ + T LI M K P + ++
Sbjct: 47 SILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+P W AMI GY G + + M+++ V P S +F A+ ACG A ++D Q
Sbjct: 104 YPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQ 163
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ G M+DL + G L AR++ E+ E V + L+ A
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 222/399 (55%), Gaps = 22/399 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF SV+ ACA L+ G+Q+HGL +K D + + LV MY+ C + A++
Sbjct: 119 KPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYS 178
Query: 68 VF---------------QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+F + K N++ WN MI G + G + A LF+ +
Sbjct: 179 LFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSV--- 235
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
+WN MISG++Q G EA LF++MQS+ + P+ + SVL A A + AL+LGK H
Sbjct: 236 -VSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHL 294
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+ + + D+ + +AL+ MY KCG A + F+ + + W+A+I + +G
Sbjct: 295 YAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKR--NAITWSAIIGAFAMHGRA 352
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
E A+ F LM + V PN +++ +LSAC HAG V++ F+ M GL+P+ EH+GC
Sbjct: 353 EDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGC 412
Query: 293 MVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
MVDLLGR+G L+EA ELIR +P EP ++ +LLGAC H N +GE +A L E+ P +
Sbjct: 413 MVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHD 472
Query: 352 PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+V LSN+YA LG WE V R+R + + K PG S
Sbjct: 473 SGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCS 511
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 226/390 (57%), Gaps = 12/390 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+++PN T +S +SACA L L+ G+++H E ++G AL+DMY KCGC+ A
Sbjct: 205 NEKPNEATVVSTLSACAVLRNLELGKEIHDYIAN-ELDLTPIMGNALLDMYCKCGCVSVA 263
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +N+ W +M+ G ++ G+ ++A LFE D W +MI+G+ Q
Sbjct: 264 REIFDAMI-VKNVNCWTSMVTGYVICGQLDQARYLFE----RSPSRDVVLWTAMINGYVQ 318
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+A LF +MQ G+ P V ++L+ CA L AL+ GK H ++ + D +
Sbjct: 319 FNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVV 378
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TALI MY KCG + F+ +K D W ++I G NG+ A+E+F+ MQ
Sbjct: 379 STALIEMYAKCGCIEKSLEIFNG--LKDMDTTSWTSIICGLAMNGKTSEALELFEAMQTC 436
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+KP+ +FVAVLSACGHAG V++ ++F M + ++P EH+GC +DLLGR+G L E
Sbjct: 437 GLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLGRAGLLQE 496
Query: 306 ARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
A EL+++LP E V +Y +LL AC + N D+GE +A L +++ + + +L++I
Sbjct: 497 AEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASI 556
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA RWEDV ++R + D + K+PG SA
Sbjct: 557 YASADRWEDVRKVRSKMKDLGIKKVPGYSA 586
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 75/392 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ + ++ G ++H +K + D + +L+DMY + G + V
Sbjct: 106 PDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQV 165
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLG 127
F+E+ R+ ++WN MI+G + R E+A++++ + E KP+ AT
Sbjct: 166 FEEMP-ERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEAT------------ 212
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSACA L L+LGKE H + I +L+ M
Sbjct: 213 -----------------------VVSTLSACAVLRNLELGKEIHDY-IANELDLTPIMGN 248
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPAF 218
AL+ MY KCG S AR FD FE P D
Sbjct: 249 ALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVL 308
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + +E A+ +F MQ V+P+ V +L+ C G +++ I +D
Sbjct: 309 WTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYID 368
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
++ +K ++++ + G ++++ E+ L + + + S++ C +N E
Sbjct: 369 EN-RIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSII--CGLAMNGKTSE 425
Query: 339 EM----AMKLQEMEPENPTPFVILSNI-YAGL 365
+ AM+ ++P++ T +LS +AGL
Sbjct: 426 ALELFEAMQTCGLKPDDITFVAVLSACGHAGL 457
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 13/264 (4%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLN--GRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
AH L+ R+IL N ++A M + G A +F + H P +N MI
Sbjct: 29 AHIFCFGLQQDRDIL--NKLMAFSMDSSLGDFNYANRIFNHIHH----PSLFIYNLMIKA 82
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F + G A LF++++ G+ P VL + ++ G++ H V++ L D
Sbjct: 83 FVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFD 142
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +L+ MY + G + F+ E+ D WN MISGY R +E AV+++ M
Sbjct: 143 PYVCNSLMDMYAELGLVEGFTQVFE--EMPERDAVSWNIMISGYVRCKRFEEAVDVYRRM 200
Query: 243 QQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
Q E KPN A+ V+ LSAC +++ +I + ++ L P + ++D+ + G
Sbjct: 201 QMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANELDLTPIMGN--ALLDMYCKCG 258
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
+ ARE+ + V+ + S++
Sbjct: 259 CVSVAREIFDAMIVKNVNCWTSMV 282
>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 228/386 (59%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF +V+S+C + GRQ+H K ++ +G++L+DMY K G + A
Sbjct: 108 EPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARG 167
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L + D + ++ISG++QLG
Sbjct: 168 VFECLP------------------------------------ERDVVSCTAIISGYAQLG 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LF ++Q GM + S+L+A + L+AL GK+ H HV+R +L +
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-K 246
+LI MY KCG ++AR+ F+ ++ WNAM+ GY ++G+ V++F LM++E K
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPVRT--VISWNAMLVGYSKHGKGIEVVKLFKLMREENK 309
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S +F+AVLS C H G DK L++F MM+ ++ EH+GC++DLLGR+GR++E
Sbjct: 310 VKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEE 369
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELI+++P EPT +++ SLLGAC H N+++GE + +L E+EPEN +VILSN+YA
Sbjct: 370 AFELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYAS 429
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV +R+++ ++ + K PG S
Sbjct: 430 AGRWEDVRNVRELMMEKAVIKEPGRS 455
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 49/314 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
+++ C + ++ G++VH +K + T L+ +Y KC CL CA +VF E++ R
Sbjct: 16 LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMR-ER 74
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N+++W +MISG+SQ G EA LF
Sbjct: 75 NVVSWT-----------------------------------AMISGYSQRGFASEALHLF 99
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M + P+ +VLS+C S +LG++ H H+ + + + ++L+ MY K
Sbjct: 100 VQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKA 159
Query: 197 GQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
G+ AR FE P+ D A+ISGY + G E A+E+F +Q+E + N ++
Sbjct: 160 GRIHEAR---GVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYA 216
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIR 311
++L+A +D Q+ + + L+ + + ++D+ + G L+ AR++
Sbjct: 217 SLLTALSGLAALDHGKQVHSHV-----LRCELPFYVVLQNSLIDMYSKCGNLNYARKIFN 271
Query: 312 ELPEPTVSVYHSLL 325
+P TV ++++L
Sbjct: 272 NMPVRTVISWNAML 285
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 230/390 (58%), Gaps = 12/390 (3%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+K+C + + T +S++ +CASL + RQVHG + I S+ +IG AL+D Y KCG
Sbjct: 138 LKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCG 197
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ ++F + R++++W +M+A R E A LF + + + +W ++I
Sbjct: 198 EPDISFSIFSRMP-ERDVVSWTSMVAAYAQASRLEDAHWLFSQMQ----EKNTVSWTALI 252
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--- 177
+GF+Q G EA LFE+M+ G+ PS SVLSACADL+ + GKE HGH+IR+
Sbjct: 253 AGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCI 312
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D + + ALI MY KCGQ A F K D WN++I+G+ +NG E ++
Sbjct: 313 DYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEK--DIVSWNSLITGFAQNGHGEESLA 370
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F+ M + ++PN +F+ +LSAC H G V + L+I M+ D+G+ P+ +H+ M+DLL
Sbjct: 371 VFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDLL 430
Query: 298 GRSGRLDEARELIRELPEPT--VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
GR+ RL+EA LI+ P+ + V ++ +LLGAC H N DL A L ++EP N +
Sbjct: 431 GRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAARY 490
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
V++ NIYA RW++ ++R+++ +R L K
Sbjct: 491 VMVYNIYAAASRWDEARQVRRLMMERGLRK 520
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 170/359 (47%), Gaps = 39/359 (10%)
Query: 1 MKECLSD-EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
+ E LS +P + S+IS C + +L+ G+ +H +K T + L+D Y KC
Sbjct: 3 LNETLSSLDPAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKC 62
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
+ AH VF L +N +WN +I+ +G +A L + + KP+ ++NS+
Sbjct: 63 DSIQSAHKVFHVLP-VKNTHSWNIIISAYSRSGLFNEAHNLLDQMP----KPNLVSYNSL 117
Query: 120 ISGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
ISG G R E+ +F+ M Q + ++ + S++ +CA L A +L ++ HG I
Sbjct: 118 ISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIII 177
Query: 178 DLNKDESMATALISMYMKCGQP----------------SW---------ARRFFDQF--- 209
LN + + ALI Y KCG+P SW A R D
Sbjct: 178 GLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLF 237
Query: 210 -EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+++ + W A+I+G+ +NG + A+ +F+ M++E + P++ +F +VLSAC +
Sbjct: 238 SQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIA 297
Query: 269 KALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ +I + + F ++D+ + G++ A L + + E + ++SL+
Sbjct: 298 RGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEKDIVSWNSLI 356
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 229/391 (58%), Gaps = 16/391 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ VT SV+SACASL L+ G Q+H +K K + D ++G ALVDMY KC + A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + RN+++ +M++G + A +F + + +WN++I+G++Q
Sbjct: 305 RVFDRM-SIRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQN 359
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN------ 180
G EA +LF ++ + P+ ++LSACA+L+ L LG++ H HV++
Sbjct: 360 GENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAE 419
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MYMKCG R F++ +K D WNA+I GY +NG A++IF
Sbjct: 420 SDIFVGNSLIDMYMKCGSIEDGSRVFEK--MKERDCVSWNAIIVGYAQNGYGAEALQIFR 477
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M KP+ + + VL AC HAG V++ F M++ GL P ++H+ CMVDLLGR+
Sbjct: 478 KMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-GLIPLKDHYTCMVDLLGRA 536
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L+EA+ LI +P P V+ SLL AC H N ++G+ A KL E++P N P+V+LS
Sbjct: 537 GCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLS 596
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA LGRW DV R+R+++ + +TK PG S
Sbjct: 597 NMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 627
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS F ++ +C + R VH L + + I L+D+Y KC CL A +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN TWN++I+ + +G ++A LF + +PD +WNSM+SGF+Q
Sbjct: 73 FDRMP-QRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDR 127
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ + F KM + + S LSACA L L +G + H V ++ + D M +A
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A F + + WN++I+ Y +NG A+E+F M ++
Sbjct: 188 LIDMYSKCGSVACAEEVFSG--MIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + +V+SAC + + LQI + + +VD+ + +++EAR
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 309 LI 310
+
Sbjct: 306 VF 307
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
+P+ +L +C + + + H ++ + + + LI +Y KC AR+
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 205 FFDQ----------------------------FEIKPD-DPAFWNAMISGYGRNGEYESA 235
FD+ F P+ D WN+M+SG+ ++ +E +
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-CMV 294
+E F M +E N SF + LSAC ++ Q+ ++ + G ++
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK--SRYSTDVYMGSALI 189
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D+ + G + A E+ + E + ++SL+
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQV------HGLTLKIEKQSDTMIGTALVDMYLKCG 60
++P+ VT I V+ AC+ ++ GR HGL + T +VD+ + G
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY------TCMVDLLGRAG 537
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS-- 118
CL A N+ + + + + + W +++A ++G +E+ + A + + DP WNS
Sbjct: 538 CLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN----IEMGKHAAEKLLEIDP--WNSGP 591
Query: 119 ---MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + +++LG + ++ + M+ G+ C
Sbjct: 592 YVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGC 626
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 228/391 (58%), Gaps = 15/391 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ VT SVISACASL ++ G++VH +K++K ++D ++ A VDMY KC + A
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + RN++ +M++G + ++ A +F +A + +WN++I+G++Q
Sbjct: 310 FIFDSMP-IRNVIAETSMVSGYAMAASTKAARLMFTKMAER----NVVSWNALIAGYTQN 364
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN------ 180
G EA LF ++ + P+ ++L ACADL+ L LG + H HV++
Sbjct: 365 GENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEE 424
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MY+KCG F + + D WNAMI G+ +NG A+E+F
Sbjct: 425 DDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFAQNGYGNEALELFR 482
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M KP+ + + VLSACGHAG V++ F+ M DFG+ P ++H+ CMVDLLGR+
Sbjct: 483 EMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRA 542
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L+EA+ +I E+P +P ++ SLL AC H N LG+ +A KL E+E N P+V+LS
Sbjct: 543 GFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLS 602
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA LG+W D +R+++ +TK PG S
Sbjct: 603 NMYAELGKWGDAMNVRKLMRKEGVTKQPGCS 633
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 148/311 (47%), Gaps = 8/311 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFG-RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
LS S F ++ +C L R VH +K ++ I L+D Y KCG L
Sbjct: 13 LSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLE 72
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+F ++ RN+ TWN+++ G+ G ++A LF + D TWNSM+SGF
Sbjct: 73 DGRQLFDKMP-QRNVFTWNSVVTGLTKLGFLDEADSLFRSMPER----DQCTWNSMVSGF 127
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q EA F M G V + S LSAC+ L+ + G + H + ++ D
Sbjct: 128 AQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDV 187
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +AL+ MY KCG + A++ FD E+ + WN++I+ Y +NG A+++F +M
Sbjct: 188 YIGSALVDMYSKCGNVNDAQQVFD--EMGDRNVVSWNSLITCYEQNGPAVEALKVFQVML 245
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ V+P+ + +V+SAC + ++ + L+ VD+ + R+
Sbjct: 246 ESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRI 305
Query: 304 DEARELIRELP 314
EAR + +P
Sbjct: 306 KEARFIFDSMP 316
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 144/390 (36%), Positives = 229/390 (58%), Gaps = 15/390 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT SV+SACA L + GRQVH +K ++ + D ++ ALVDMY KCG A
Sbjct: 991 PDEVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARC 1050
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + SR++++ ++I G + E A +F + + + WN +I+ ++Q G
Sbjct: 1051 VFDRM-ASRSVVSETSLITGYARSANVEDAQMVFSQMVEK----NVIAWNVLIAAYAQNG 1105
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN------K 181
EA +LF +++ + P+ +VL+AC +++ L+LG++ H HV++
Sbjct: 1106 EEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPES 1165
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + +L+ MY+K G + F++ + D WNAMI G+ +NG + A+ +F+
Sbjct: 1166 DVFVGNSLVDMYLKTGSIDDGAKVFERMAAR--DNVSWNAMIVGHAQNGRAKDALHLFER 1223
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M K P+S + + VLSACGH+G V++ + F M +D G+ P Q+H+ CM+DLLGR+G
Sbjct: 1224 MLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAG 1283
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L E ELI+E+ EP ++ SLLG+C H N ++GE A KL E++P N P+V+LSN
Sbjct: 1284 HLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSN 1343
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA LG+W DV R+R + R ++K PG S
Sbjct: 1344 MYAELGKWADVFRVRSSMKHRGVSKQPGCS 1373
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 178/351 (50%), Gaps = 41/351 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E +++T SV+SAC +L + G +VH +K S ++ ALV MY KCGCL
Sbjct: 381 EFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCL----- 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
RS + + LFE G + D +WNS+ISG+ +
Sbjct: 436 -------------------------RSAERLLLFE----MGSERDSYSWNSLISGYERHS 466
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M A KMQS + P+ +S L+ACA++ LK G + H ++IR D+ + +
Sbjct: 467 MSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDILRS 525
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
LI MY KC Q ++ R F E +P D WN+MI G +G+ E +++FD MQ++
Sbjct: 526 VLIDMYCKCRQFDYSIRIF---EARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQG 582
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+K +S +F+ L +C GHV FT+M D+ + P+ EH+ CM++LLG+ G + E
Sbjct: 583 IKADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVEL 641
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
+ + +P EPT +++ + C + N LGE A + + P P FV
Sbjct: 642 EDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFV 692
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 152/339 (44%), Gaps = 71/339 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F S +SACA+ + G QVH L K D IG+AL+DMY KC A VF
Sbjct: 891 NAYSFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVF 950
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + RNI++WN++I NG +A+ LF + GF PD T
Sbjct: 951 EAMP-ERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVT-------------- 995
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
+ SV+SACA L+A + G++ H V+++D +D ++ A
Sbjct: 996 ---------------------LASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNA 1034
Query: 189 LISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAFW 219
L+ MY KCG+ AR FD+ ++ + W
Sbjct: 1035 LVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAW 1094
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N +I+ Y +NGE E A+ +F +++E V P ++ VL+ACG+ + Q +
Sbjct: 1095 NVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLK 1154
Query: 280 D---FGLKPKQEHF--GCMVDLLGRSGRLDEARELIREL 313
+ F P+ + F +VD+ ++G +D+ ++ +
Sbjct: 1155 EGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERM 1193
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 12/338 (3%)
Query: 38 LKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
LK ++T + LV Y + G LP A VF E+ N ++N +++ GR A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHP-NTFSYNALLSAHARLGRPADA 845
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
LF + PD ++N++I+ +Q +A M + V + S LSA
Sbjct: 846 RALFHAIP----DPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSA 901
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DP 216
CA + G + H V ++ KD + +AL+ MY KC P ARR FE P+ +
Sbjct: 902 CAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRV---FEAMPERNI 958
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
WN++I+ Y +NG A+ +F M + P+ + +V+SAC + Q+
Sbjct: 959 VSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHAR 1018
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
+ + +VD+ + GR AR + + +V SL+ + S
Sbjct: 1019 VVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITG---YARSAN 1075
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
E+ M +M +N + +L YA G E+ R+
Sbjct: 1076 VEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRL 1113
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 121/286 (42%), Gaps = 65/286 (22%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P T SV+S CA L L RQ+HG K + QS+ ++GTALVD+Y C L
Sbjct: 145 LGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLAD 204
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F ++ +P+ +WN ++ +
Sbjct: 205 ARRAFDDI------------------------------------LEPNAISWNVIVRRYH 228
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
GM A +F +M S G+ P V+ + AC D +AL+ G+ H V+R
Sbjct: 229 LAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVH 288
Query: 185 MATALISMYMKCGQPSWARRFFD----------------------------QFE-IKPDD 215
+ ++++ MY KCG A+ F+ FE +K +
Sbjct: 289 VRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERN 348
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
WNAM++GY R+ + A+ +F M+QE + ++ + +VLSAC
Sbjct: 349 LVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC 394
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 15/238 (6%)
Query: 81 WNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQ 140
+N I + G A ELF+ + D +WN++I+ S+ G EA LF M
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLR----DGGSWNAIITASSRAGHPSEALSLFSNMN 143
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
S G+ P + SVLS CA+ L ++ HGH+ + D + + TAL+ +Y C +
Sbjct: 144 SLGIRPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLA 203
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
ARR FD +I + WN ++ Y G + AV++F M V+P + + A
Sbjct: 204 DARRAFD--DILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLA 261
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELP 314
C +++ I F L+ EH +VD+ + G +D A+ L P
Sbjct: 262 CRDNNALEEGRCIHA-----FVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFNLAP 314
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQV-------HGLTLKIEKQSDTMIGTALVDMY 56
C + P+SVT I V+SAC ++ GR+ HG+ I Q T ++D+
Sbjct: 1226 CSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGI---IPSQDHY---TCMIDLL 1279
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G L + +E+ + + W +++ L+ K +E+ E A + F+ DP
Sbjct: 1280 GRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH----KNVEMGEWAAGKLFELDPRNS 1335
Query: 117 NSMI---SGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + +++LG + F++ M+ G+ C
Sbjct: 1336 GPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGC 1372
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 229/392 (58%), Gaps = 23/392 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P S TF ++ AC + L + G+QVH T+ I SD +G +++D+Y+KCG L CA
Sbjct: 140 PVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARK 199
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++W +I G E A LF+ L + D W +M++G++Q G
Sbjct: 200 VFDEMS-ERDVVSWTELIVAYAKYGDMESASGLFDDLPLK----DMVAWTAMVTGYAQNG 254
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK------ 181
EA + F+KMQ GM + V+SACA L A+K H + IR +
Sbjct: 255 RPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVK-----HANWIRDIAERSGFGPS 309
Query: 182 -DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIF 239
+ + +ALI MY KCG P A + FE+ + F +++MI GY +G SA+++F
Sbjct: 310 GNVVVGSALIDMYSKCGSPDEA---YKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLF 366
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M + +++PN +F+ +LSAC HAG V++ Q+F M+ FG+ P +H+ CMVDLLGR
Sbjct: 367 HDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGR 426
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+G L+EA +L++ +P EP V+ +LLGAC H N D+ + A +L ++EP +++L
Sbjct: 427 AGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILL 486
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SNIYA GRWE+V ++R++I ++ K PG S
Sbjct: 487 SNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 34/289 (11%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+P W +MI G++ G+ E+ + +M+ G+ P +++ AC + LGK+
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 171 HGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H I D + ++I +Y+KCG AR+ FD+
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 209 -------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
F+ P D W AM++GY +NG + A+E F MQ ++ + + V+SA
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 261 CGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G V A I + + FG ++D+ + G DEA ++ + E V
Sbjct: 285 CAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVF 344
Query: 320 VYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSNI-YAGL 365
Y S++ H +S L M E+ P T ILS +AGL
Sbjct: 345 SYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGL 393
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 123/251 (49%), Gaps = 16/251 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
E + VT VISACA L ++ + + + + ++G+AL+DMY KCG A
Sbjct: 272 ETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEA 331
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VF+ +K RN+ ++++MI G ++GR+ A++LF + +P+ T+ ++S S
Sbjct: 332 YKVFEVMK-ERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSH 390
Query: 126 LGMRFEAFKLFEKMQS-TGMVPS---LKCVTSVLSACADL-SALKLGKETHGHVIRADLN 180
G+ + +LF KM+ G+ PS C+ +L L AL L K +
Sbjct: 391 AGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTM-------PME 443
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ + AL+ G P A+ ++ F+++P+ + + + Y G +E ++
Sbjct: 444 PNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLR 503
Query: 240 DLMQQEKVKPN 250
+++++ K N
Sbjct: 504 KVIREKGFKKN 514
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 3/175 (1%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L C S +K + H H+IR L++ + T LI M K P + ++
Sbjct: 47 SILHDCTLFSQIK---QVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+P W AMI GY G + + M+++ V P S +F A+ ACG A ++D Q
Sbjct: 104 YPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQ 163
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ G M+DL + G L AR++ E+ E V + L+ A
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVA 218
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 239/450 (53%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+T +SV+ A A L L+ GR +HG + + + TA++D Y KCG + A
Sbjct: 240 KPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARL 299
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
VF+ + SRN+++WNTMI G NG SE+A F + EG +P
Sbjct: 300 VFKGM-SSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLG 358
Query: 112 -------------------DPATWNSMIS------------------------------- 121
D + NS+IS
Sbjct: 359 DLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMIL 418
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G++Q G EA LF +MQS + P + SV++A ADLS + K HG IR ++K
Sbjct: 419 GYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDK 478
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TALI + KCG AR+ FD + + WNAMI GYG NG A+++F+
Sbjct: 479 NVFVCTALIDTHAKCGAIQTARKLFDLMQER--HVITWNAMIDGYGTNGHGREALDLFNE 536
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ VKPN +F++V++AC H+G V++ + F M +++GL+P +H+G MVDLLGR+G
Sbjct: 537 MQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAG 596
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RLD+A + I+++P +P ++V ++LGAC H N +LGE+ A +L +++P++ V+L+N
Sbjct: 597 RLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLAN 656
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA W+ V R+R + + + K PG S
Sbjct: 657 MYASASMWDKVARVRTAMEKKGIQKTPGCS 686
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 39/317 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P F ++ L L+ GR++HG+ + QS+ TA+V++Y KC
Sbjct: 140 PVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKC--------- 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R I E A ++FE + D +WN++++G++Q G
Sbjct: 191 -------RQI----------------EDAYKMFERMPQR----DLVSWNTVVAGYAQNGF 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++ +MQ G P + SVL A ADL AL++G+ HG+ RA ++ATA
Sbjct: 224 ARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ Y KCG AR F + + WN MI GY +NGE E A F M E V+
Sbjct: 284 MLDTYFKCGSVRSARLVFKGMSSR--NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVE 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P + S + L AC + G +++ + ++D+ + ++ + + R+D A
Sbjct: 342 PTNVSMMGALHACANLGDLERGRYVHRLLDEK-KIGFDVSVMNSLISMYSKCKRVDIAAS 400
Query: 309 LIRELPEPTVSVYHSLL 325
+ L TV +++++
Sbjct: 401 VFGNLKHKTVVTWNAMI 417
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 142/294 (48%), Gaps = 18/294 (6%)
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A +FE + H K D +++M+ G+++ +A + +E+M+ ++P + T +L
Sbjct: 94 EAARVFEPVEH---KLD-VLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLL 149
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
+ L+ G+E HG VI + TA++++Y KC Q A + F++ + D
Sbjct: 150 QLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQR--D 207
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN +++GY +NG AV++ MQ+ KP+S + V+VL A KAL+I
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADL----KALRIGR 263
Query: 276 MMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ + + E+ M+D + G + AR + + + V +++++ +
Sbjct: 264 SI-HGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQN 322
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIY--AGLGRWEDVGRIRQMINDRQL 383
S+ +K+ + E PT ++ ++ A LG E + ++++++++
Sbjct: 323 GESEEAFATFLKMLD-EGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKI 375
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 6 SDEPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLK 58
S +PN +TF+SVI+AC+ + Y + ++ +GL ++ A+VD+ +
Sbjct: 541 SVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYG------AMVDLLGR 594
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
G L A Q++ I T++ M+ R K +EL E A E F DP
Sbjct: 595 AGRLDDAWKFIQDMPVKPGI----TVLGAMLGACRIHKNVELGEKTADELFDLDP 645
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 46/417 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ +V+ AC+ + G QVH +K D I ++ + MY G L A +
Sbjct: 135 PNKYTYPAVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 194
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA---TWNSMISGFSQ 125
+ G + + WN MI G + G E A ELFEG+ PD + TWN+MISGFS+
Sbjct: 195 LDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM------PDRSMISTWNAMISGFSR 248
Query: 126 LGMR-------------------------------FEAFKLFEKMQSTGMVPSLKCVTSV 154
GM EA ++F +MQ + P + SV
Sbjct: 249 CGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSV 308
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
LSACA+L AL G+ H + R + D + T+L+ MY KCG+ A F++ K
Sbjct: 309 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-- 366
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ + WNAMI G +G E A+++F M + PN +FV VL+AC H G V K L IF
Sbjct: 367 EVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIF 423
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M ++G++P+ EH+GC+VDLLGR+G L EA +++ +P EPT +V+ +LLGAC H N
Sbjct: 424 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 483
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LGE + L E+EP+N + +LSNIYA GRWE+VG +R+++ +R + PG S
Sbjct: 484 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 540
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 163/374 (43%), Gaps = 40/374 (10%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC-----LPCAHNVFQELKGSRNILTW 81
L +Q H L L+ D+ I +LV Y + VF ++ N+ W
Sbjct: 47 LHHLKQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKP-NVFLW 105
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
N MI + N KA+ L+ + F+P+ T+ +++ S G+ E ++ +
Sbjct: 106 NCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLVK 165
Query: 142 TGMVPSLKCVTSVLSACAD----LSALKLGKETHGHVIRADLNK---------------- 181
G+ ++S + A + A ++ + G V N
Sbjct: 166 HGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAARE 225
Query: 182 ------DESMAT---ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
D SM + A+IS + +CG AR FFD E+K D W+AMI GY + G +
Sbjct: 226 LFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFD--EMKERDEISWSAMIDGYIQEGCF 283
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
A+EIF MQ+EK++P +VLSAC + G +D+ I T + ++
Sbjct: 284 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN-SIQLDGVLGTS 342
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+VD+ + GR+D A E+ ++ VS +++++G H ++ ++ K+ ++ P N
Sbjct: 343 LVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM-DINP-NE 400
Query: 353 TPFVILSNIYAGLG 366
FV + N A G
Sbjct: 401 ITFVGVLNACAHGG 414
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 222/399 (55%), Gaps = 22/399 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF SV+ ACA L+ G+Q+HGL +K D + + LV MY+ C + A++
Sbjct: 119 KPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYS 178
Query: 68 VF---------------QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+F + K N++ WN MI G + G + A LF+ +
Sbjct: 179 LFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSV--- 235
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
+WN MISG++Q G EA LF++MQS+ + P+ + SVL A A + AL+LGK H
Sbjct: 236 -VSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHL 294
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+ + + D+ + +AL+ MY KCG A + F+ + + W+A+I + +G
Sbjct: 295 YAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKR--NAITWSAIIGAFAMHGRA 352
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
E A+ F LM + V PN +++ +LSAC HAG V++ F+ M GL+P+ EH+GC
Sbjct: 353 EDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGC 412
Query: 293 MVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
MVDLLGR+G L+EA ELIR +P EP ++ +LLGAC H N +GE +A L E+ P +
Sbjct: 413 MVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHD 472
Query: 352 PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+V LSN+YA LG WE V R+R + + K PG S
Sbjct: 473 SGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCS 511
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/391 (38%), Positives = 232/391 (59%), Gaps = 15/391 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ +T SV+SACAS ++ G Q+H +K +K ++D ++G ALVDMY KC + A
Sbjct: 249 EPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + RN+++ +M+ G + A +F + + + +WN++I+G++Q
Sbjct: 309 LVFDRMP-LRNVVSETSMVCGYARAASVKAARLMFSNM----MEKNVVSWNALIAGYTQN 363
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------N 180
G EA +LF ++ + P+ ++L+ACA+L+ LKLG++ H +++
Sbjct: 364 GENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEE 423
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MYMKCG F++ + D WNAMI GY +NG +A+EIF
Sbjct: 424 SDIFVGNSLIDMYMKCGMVEDGCLVFER--MVERDVVSWNAMIVGYAQNGYGTNALEIFR 481
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M KP+ + + VLSAC HAG V++ + F M + GL P ++HF CMVDLLGR+
Sbjct: 482 KMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRA 541
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G LDEA +LI+ +P +P V+ SLL AC H N +LG+ +A KL E++P N P+V+LS
Sbjct: 542 GCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLS 601
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA LGRW+DV R+R+ + R + K PG S
Sbjct: 602 NMYAELGRWKDVVRVRKQMRQRGVIKQPGCS 632
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 7/309 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F ++ +C R++H +K + S+ I LVD Y KCG A VF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RN ++N +++ + G+ ++A +F+ + +PD +WN+M+SGF+Q
Sbjct: 78 DRMP-QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMP----EPDQCSWNAMVSGFAQHDRF 132
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA + F M S V + S LSACA L+ L +G + H + ++ D M +AL
Sbjct: 133 EEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSAL 192
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG + A+R FD ++ + WN++I+ Y +NG A+E+F +M V+P
Sbjct: 193 VDMYSKCGVVACAQRAFDGMAVR--NIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEP 250
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V+SAC + + LQI + + +VD+ + R++EAR +
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 310 IRELPEPTV 318
+P V
Sbjct: 311 FDRMPLRNV 319
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/451 (34%), Positives = 233/451 (51%), Gaps = 70/451 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S+T ++V+ A A + L G+ +HG ++ I TAL DMY KCG + A
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
+F + + +++WN+M+ G + NG EKA+ +FE + EG P
Sbjct: 305 IFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 112 -------------------DPATWNSMISGFS---------------------------- 124
D + NS+IS +S
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 125 ---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q G EA F +M+S GM P + SV+ A A+LS + K HG +IR+ L+K
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+ MY KCG AR+ FD I WNAMI GYG +G +A+++FD
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDM--ISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ V+PN ++++V+SAC H+G VD+ L+ F M D+GL+P +H+G MVDLLGR+G
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
R+ EA + I +P P ++VY ++LGAC H N ++GE+ A KL E+ P+ V+L+N
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
IYA +W V +R+ + + L K PG S
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSV 692
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 39/306 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P F ++ C L+ G+++HG + ++ T +V+MY KC + A+
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R++++WNT+IAG NG ++KA+EL + EG +PD T
Sbjct: 204 MFDRMP-ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT------------ 250
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +VL A AD+ L +GK HG+ IRA K +++T
Sbjct: 251 -----------------------LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIST 287
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KCG AR FD + K WN+M+ GY +NGE E A+ +F+ M +E +
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKT--VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + + L AC G +++ + + D L ++ + + R+D A
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFV-DQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 308 ELIREL 313
++ L
Sbjct: 405 DIFNNL 410
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 124/252 (49%), Gaps = 14/252 (5%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L +P+S T +SVI A A L + + +HGL ++ + + TALVDMY KCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F ++ R+++TWN MI G +G A++LF+ + +P+ T+ S+IS
Sbjct: 502 HMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISA 560
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
S G+ E + F+ M Q G+ PS+ +++ + KE + ++
Sbjct: 561 CSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRI---KEAWDFIENMPISP 617
Query: 182 DESMATAL-----ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
++ A+ I ++ G+ + A++ FE+ PD+ + + + Y ++
Sbjct: 618 GITVYGAMLGACKIHKNIEVGEKA-AKKL---FELNPDEGGYHVLLANIYASTSKWSKVA 673
Query: 237 EIFDLMQQEKVK 248
E+ M+++ +K
Sbjct: 674 EVRKTMEKKGLK 685
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
A +++M+ G+++ A +M+ + P + T +L C D + LK GKE HG
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+I + T +++MY KC Q A + FD+ + D WN +I+G+ +NG +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER--DLVSWNTIIAGFSQNGFAK 230
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFG 291
A+E+ MQ E +P+S + V VL A G V K++ + + G
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA---GFAKLVNIST 287
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE- 350
+ D+ + G ++ AR + + + TV ++S++ ++ + E+ ++M E
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG---YVQNGEPEKAIAVFEKMLEEG 344
Query: 351 -NPTPFVILSNIYA 363
+PT I+ ++A
Sbjct: 345 IDPTGVTIMEALHA 358
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/417 (37%), Positives = 225/417 (53%), Gaps = 46/417 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ +V+ AC+ + G QVH +K D I ++ + MY G L A +
Sbjct: 136 PNKYTYPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRI 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA---TWNSMISGFSQ 125
+ G + + WN MI G + G E A ELFEG+ PD + TWN+MISGFS+
Sbjct: 196 LDDKGGEVDAVCWNAMIDGYLRFGEVEAARELFEGM------PDRSMISTWNAMISGFSR 249
Query: 126 LGMR-------------------------------FEAFKLFEKMQSTGMVPSLKCVTSV 154
GM EA ++F +MQ + P + SV
Sbjct: 250 CGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSV 309
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
LSACA+L AL G+ H + R + D + T+L+ MY KCG+ A F++ K
Sbjct: 310 LSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK-- 367
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ + WNAMI G +G E A+++F M + PN +FV VL+AC H G V K L IF
Sbjct: 368 EVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEITFVGVLNACAHGGLVQKGLTIF 424
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M ++G++P+ EH+GC+VDLLGR+G L EA +++ +P EPT +V+ +LLGAC H N
Sbjct: 425 NSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGN 484
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LGE + L E+EP+N + +LSNIYA GRWE+VG +R+++ +R + PG S
Sbjct: 485 VELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 541
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 113/284 (39%), Gaps = 63/284 (22%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP+ WN MI + F+A L+ +M P+ +VL AC+D + G +
Sbjct: 100 KPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQ 159
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H H+++ L D + ++ I MY G+ ARR D
Sbjct: 160 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 219
Query: 209 --------FEIKPDDP--AFWNAMISGYGRNGEYESAVEIFDLM---------------- 242
FE PD + WNAMISG+ R G E A E FD M
Sbjct: 220 EVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYI 279
Query: 243 ---------------QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
Q+EK++P +VLSAC + G +D+ I T + ++
Sbjct: 280 QEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRN-SIQLDG 338
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+VD+ + GR+D A E+ ++ VS +++++G H
Sbjct: 339 VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMH 382
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 225/410 (54%), Gaps = 31/410 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF + +C S ++ GRQ+HG LK D I L+ +Y CGC+ A ++
Sbjct: 106 PDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHL 165
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE--------------------GLAHEG 108
+ R++++WN +++ G E A LF+ GL E
Sbjct: 166 LDRML-ERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEA 224
Query: 109 ---FKPDPA----TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
F P +WN+MI+G+S G E LFE MQ G+ P + SVLSACA +
Sbjct: 225 RRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHV 284
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
AL G+ H ++ + ++ D +ATAL+ MY KCG A F+ K D + WN+
Sbjct: 285 GALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRK--DISTWNS 342
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+ISG +G + A++IF M E KPN +FV VLSAC AG +D+ ++F +M
Sbjct: 343 IISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVH 402
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS-VYHSLLGACWCHLNSDLGEEM 340
G++P EH+GCMVDLLGR G L+EA EL++++P+ S V+ SLLGAC H N +L E +
Sbjct: 403 GIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERV 462
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A KL E+ P+ + FV LSN+YA +GRW+DV +RQ + + + K PG S
Sbjct: 463 AQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCS 512
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 124/246 (50%), Gaps = 8/246 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T +SV+SACA + L G VH K D + TALVDMY KCG + A
Sbjct: 268 KPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALE 327
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++I TWN++I+G+ +G + A+++F + EGFKP+ T+ ++S S+ G
Sbjct: 328 VFNSCL-RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAG 386
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E ++F M G+ P+++ ++ + L+ +E +++ K+ S+
Sbjct: 387 LLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEE----LVQKMPQKEASVV 442
Query: 187 -TALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+L+ G A R + E+ P + + + + + Y G ++ +E+ M+
Sbjct: 443 WESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRA 502
Query: 245 EKVKPN 250
+ V+ +
Sbjct: 503 QGVRKD 508
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 30/203 (14%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P+ WN++I ++ A +F +M ++P T L +C S ++ G++
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HGHV++ L D + LI +Y CG AR D+ + D WNA++S Y
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR--MLERDVVSWNALLSAYAER 187
Query: 230 GEYESAVEIFDLMQQEKVKP---------------------------NSASFVAVLSACG 262
G E A +FD M + V+ N S+ A+++
Sbjct: 188 GLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYS 247
Query: 263 HAGHVDKALQIFTMMDDDFGLKP 285
HAG + L +F M G+KP
Sbjct: 248 HAGRFSEVLVLFEDMQHA-GVKP 269
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/393 (37%), Positives = 228/393 (58%), Gaps = 9/393 (2%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
KE LS P+S TF ++ ACA LL + G ++HGL +K +SD + T+LV +Y KCG
Sbjct: 101 KEGLS--PDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGF 158
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---GLAHEGFKPDPATWNS 118
+ A VF ++ +N+ W +I+G + G+ +A+++F + + D +W+S
Sbjct: 159 IDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSS 217
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI G++ G+ EA LF KM + G P + VL ACA L AL+LG + R +
Sbjct: 218 MIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNE 277
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ + TALI MY KCG+ A F ++ D WNA ISG +G ++A +
Sbjct: 278 FLGNPVLGTALIDMYAKCGRMDSAWEVFRG--MRKKDIVVWNAAISGLAMSGHVKAAFGL 335
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M++ ++P+ +FV +L AC HAG VD+ Q F M+ F L P+ EH+GCMVDLLG
Sbjct: 336 FGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLG 395
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+G LDEA +L++ +P E V+ +LLG C H ++ L E + +L +EP N +V+
Sbjct: 396 RAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVL 455
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
LSNIY+ +WED +IR ++++R + K+PG S
Sbjct: 456 LSNIYSASHKWEDAAKIRSIMSERGIKKVPGYS 488
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 165/410 (40%), Gaps = 95/410 (23%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ + VH L++ D+ + ++ G +H +F + K NI +NTMI
Sbjct: 23 LKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTK-EPNIFLFNTMIH 81
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G++LN ++++E++ + EG PD T+ P
Sbjct: 82 GLVLNDSFQESIEIYHSMRKEGLSPDSFTF-----------------------------P 112
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
L L ACA L KLG + HG V++A D + T+L+S+Y KCG A + F
Sbjct: 113 FL------LKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVF 166
Query: 207 DQFEIK------------------------------------PDDPAFWNAMISGYGRNG 230
D K D W++MI GY NG
Sbjct: 167 DDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNG 226
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A+++F M E +P+ + V VL AC G ++ +MD + E
Sbjct: 227 LPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMD-------RNEFL 279
Query: 291 G------CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAM 342
G ++D+ + GR+D A E+ R + + + V+++ + A H+ + G M
Sbjct: 280 GNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQM 339
Query: 343 KLQEMEPENPTPFVIL-SNIYAGLGRWEDVGRIRQMIN--DRQLTKLPGI 389
+ +EP+ T +L + +AGL V RQ N +R T P I
Sbjct: 340 EKSGIEPDGNTFVGLLCACTHAGL-----VDEGRQYFNSMERVFTLTPEI 384
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/385 (38%), Positives = 222/385 (57%), Gaps = 8/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +TF + ACAS L G+ +H +K D TALVDMY K G L A V
Sbjct: 8 PNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQV 67
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+I TWN++IAG +G E A+ELF+ + +W +MISG+SQ GM
Sbjct: 68 FDEMT-VRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSV----VSWTTMISGYSQNGM 122
Query: 129 RFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F KM+ V P+ + SV SACA L AL++G+ + L K+ ++
Sbjct: 123 YTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSN 182
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY +CG+ AR F++ K + WN+M+ G +G A++++D M E +
Sbjct: 183 TLLEMYARCGKIDAARHVFNEIG-KRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGI 241
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV ++ AC H G V K Q+F M+ +F + PK EH+GCMVDLLGR+G L EA
Sbjct: 242 EPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQEAY 301
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L++ +P +P ++ +LLGAC H N + E A L ++EP NP +VIL NIYA
Sbjct: 302 DLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYASAQ 361
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW+ V ++R+++ Q+TK G S
Sbjct: 362 RWDGVAKLRKLMKGGQITKAAGYSV 386
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 41/260 (15%)
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P+ T + ACA +L GK H H I++ + D TAL+ MY K G A
Sbjct: 5 GCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLA 64
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-------------------- 242
R+ FD+ ++ D WN++I+GY R+G+ E A+E+F LM
Sbjct: 65 RQVFDEMTVR--DIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGM 122
Query: 243 ------------QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ ++V+PN + +V SAC G ++ +I + D+ GL
Sbjct: 123 YTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDN-GLMKNLYVS 181
Query: 291 GCMVDLLGRSGRLDEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEM 347
++++ R G++D AR + E+ + ++S++ H S+ ++ ++ + +
Sbjct: 182 NTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEALQLYDQMLGEGI 241
Query: 348 EPENPTPFV--ILSNIYAGL 365
EP++ T FV IL+ + GL
Sbjct: 242 EPDDVT-FVGLILACTHGGL 260
>gi|359476090|ref|XP_003631788.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g20540-like [Vitis vinifera]
Length = 515
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 227/384 (59%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ CA L+ G+QVHG K +S+T+I +LV+MY+KC L AH V
Sbjct: 89 PDKFTFPFVVKXCAGLMCYNLGKQVHGHAFKFGPKSNTVIENSLVEMYVKCDSLDDAHRV 148
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ R+ ++WNT+I+G + G+ +A +FE L + +W +++SG++++G
Sbjct: 149 FEEMT-ERDAVSWNTLISGHVRLGQMRRARAIFEELQDKTI----FSWTAIVSGYARIGC 203
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A + F +MQ + + SVL ACA L AL+LGK H + +A +D + A
Sbjct: 204 HAVALEFFRRMQMVDIELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNA 263
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y K G RR F + + D W+ MI G +G A+E+F MQ+ KV+
Sbjct: 264 LIEVYAKRGSMDEGRRLFHK--MNERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVE 321
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +LSAC HAG +++ L F M+ D ++P EH+GC+V+LLG SGRLD+A E
Sbjct: 322 PNIITFVGLLSACAHAGLLNEGLGYFESMERDDNIEPGVEHYGCLVNLLGLSGRLDQALE 381
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+++P +P ++ L +C H N ++ L E+EP++ ++ LSN+YA LG+
Sbjct: 382 LIKKMPMKPDSDIWGLLSSSCRSHGNLEIVAIAMEHLLELEPDDTGNYITLSNLYADLGK 441
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R++++ + + K PG S+
Sbjct: 442 WDGVSRMRKLMSSKYMNKTPGCSS 465
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + ++ +SV+ ACA L L+ G+ +H K D + AL+++Y K G +
Sbjct: 220 ELDEISLVSVLPACAQLGALELGKWIHIYADKAGFLRDICVCNALIEVYAKRGSMDEGRR 279
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R++++W+TMI G+ +GR+ +A+ELF+ + +P+ T+ ++S + G
Sbjct: 280 LFHKM-NERDVISWSTMIVGLANHGRAREAIELFQEMQKAKVEPNIITFVGLLSACAHAG 338
Query: 128 MRFEAFKLFEKMQ 140
+ E FE M+
Sbjct: 339 LLNEGLGYFESME 351
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 195/316 (61%), Gaps = 7/316 (2%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN+ TWNTMI G G+ +A LF+ + K DP +W +MI+G+SQ G +EA +L
Sbjct: 336 RNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSYEALRL 391
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F M+ G + +S LS CAD+ AL+LGK+ HG +++ + AL+ MY K
Sbjct: 392 FVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 451
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A F E+ D WN MI+GY R+G E A+ F+ M++E +KP+ A+ V
Sbjct: 452 CGSIEEANDLFK--EMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMV 509
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
AVLSAC H G VDK Q F M D+G++P +H+ CMVDLLGR+G L+EA L++ +P
Sbjct: 510 AVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPF 569
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
EP +++ +LLGA H N++L E A K+ MEPEN +V+LSN+YA GRW DVG++
Sbjct: 570 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 629
Query: 375 RQMINDRQLTKLPGIS 390
R + D+ + K+PG S
Sbjct: 630 RVRMRDKGVKKVPGYS 645
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 155/323 (47%), Gaps = 20/323 (6%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F S +S CA ++ L+ G+Q+HG +K ++ +G AL+ MY KCG + A+++F
Sbjct: 403 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 462
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E+ G ++I++WNTMIAG +G E+A+ FE + EG KPD AT +++S S G+
Sbjct: 463 KEMAG-KDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLV 521
Query: 130 FEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ + F M Q G+ P+ + C+ +L L +E H + D ++
Sbjct: 522 DKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAG------LLEEAHNLMKNMPFEPDAAI 575
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
L+ G A D+ F ++P++ + + + Y +G + ++ M+
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635
Query: 245 EKVKPNSA-SFVAVLS-----ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
+ VK S++ + + + G H +K +IF + +D L+ K+ + ++
Sbjct: 636 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKD-EIFAFL-EDLDLRMKKAGYVSKTSVVL 693
Query: 299 RSGRLDEARELIRELPEPTVSVY 321
+E ++R E Y
Sbjct: 694 HDVEEEEKERMVRYHSERLAVAY 716
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 147/308 (47%), Gaps = 39/308 (12%)
Query: 26 YLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y++ GR L K + ++ A++ YL+ G A +F E+ R++++WN M
Sbjct: 69 YMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP-ERDLVSWNVM 127
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
I G + N KA ELFE + D +WN+++SG++Q G +A ++F++M
Sbjct: 128 IKGYVRNRNLGKARELFERMPER----DVCSWNTILSGYAQNGCVDDARRVFDRMPEKND 183
Query: 145 VPSLKCVTSVLSACADLSALK-----LGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
V ++LSA S L+ G + ++ + L+ ++K +
Sbjct: 184 VS----WNALLSAYVQNSKLEEACVLFGSRENWALVSWN---------CLLGGFVKKKKI 230
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
AR+FFD +++ D WN +I+GY +NGE + A ++FD E + ++ A++S
Sbjct: 231 VEARQFFDSMKVR--DVVSWNTIITGYAQNGEIDEARQLFD----ESPVHDVFTWTAMVS 284
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPT 317
V++A ++F M P++ L G + R++ A+EL +P
Sbjct: 285 GYIQNRMVEEARELFDRM-------PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRN 337
Query: 318 VSVYHSLL 325
VS +++++
Sbjct: 338 VSTWNTMI 345
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 118/283 (41%), Gaps = 50/283 (17%)
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G +I WN I+ M GR +A+ +F+ + + ++N+MISG+ + G A
Sbjct: 55 GDSDIKEWNVAISSYMRTGRCSEALRVFKRMP----RWSSVSYNAMISGYLRNGEFELAR 110
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF++M P V+ + + LGK + +D ++S Y
Sbjct: 111 MLFDEM------PERDLVSWNVMIKGYVRNRNLGKAR--ELFERMPERDVCSWNTILSGY 162
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-------------- 239
+ G ARR FD+ K D WNA++S Y +N + E A +F
Sbjct: 163 AQNGCVDDARRVFDRMPEKND--VSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCL 220
Query: 240 --DLMQQEKVKP-----------NSASFVAVLSACGHAGHVDKALQIF--TMMDDDFGLK 284
++++K+ + S+ +++ G +D+A Q+F + + D F
Sbjct: 221 LGGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFT-- 278
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ MV ++ ++EAREL +PE ++++L
Sbjct: 279 -----WTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAG 316
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQV-HGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+P+ T ++V+SAC+ + GRQ H +T + ++ +VD+ + G L AH
Sbjct: 502 KPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAH 561
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
N+ + + + W T++ ++G + EL E A + F +P
Sbjct: 562 NLMKNMPFEPDAAIWGTLLGASRVHGNT----ELAETAADKIFAMEP 604
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 230/386 (59%), Gaps = 8/386 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ TF VI +CA LL + G+QVH K ++ + AL+DMY KCG + A
Sbjct: 101 SASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGA 160
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ V++E+ R+ ++WN++I+G + G+ + A E+F+ + +W +MI+G+++
Sbjct: 161 YQVYEEMT-ERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRTI----VSWTTMINGYAR 215
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A +F +MQ G+ P V SVL ACA L AL++GK H + ++ K+ +
Sbjct: 216 GGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGV 275
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AL+ MY KCG A F+Q K D W+ MI G +G+ +A+ +F+ MQ+
Sbjct: 276 FNALVEMYAKCGCIDEAWGLFNQMIEK--DVISWSTMIGGLANHGKGYAAIRVFEDMQKA 333
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN +FV VLSAC HAG ++ L+ F +M D+ L+P+ EH+GC+VDLLGRSG++++
Sbjct: 334 GVTPNGVTFVGVLSACAHAGLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQ 393
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + I ++P +P ++SLL +C H N ++ +L ++EPE +V+L+NIYA
Sbjct: 394 ALDTILKMPMQPDSRTWNSLLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAK 453
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L +WE V +R++I +++ K PG S
Sbjct: 454 LDKWEGVSNVRKLIRSKRIKKTPGCS 479
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+ L C ++ LK + H H+++ L++ + T ++ + +A F Q E
Sbjct: 11 VTTLRNCPKIAELK---KIHAHIVKLSLSQSNFLVTKMLDLCDNLSHVDYATMIFQQLE- 66
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKA 270
P+ ++ NA+I Y N ++ A+ +F+ M K P+ +F V+ +C AG + +
Sbjct: 67 NPNVFSY-NAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIKSC--AGLLCRR 123
Query: 271 L-QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
L Q FG K ++D+ + G + A ++ E+ E ++SL+
Sbjct: 124 LGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISG-- 181
Query: 330 CHLNSDLGEEMAMK--LQEMEPENPTPFVILSNIYAGLGRWED-VGRIRQM 377
+ LG+ + + EM + + N YA G + D +G R+M
Sbjct: 182 ---HVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREM 229
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/385 (40%), Positives = 214/385 (55%), Gaps = 40/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T ++V+SACA L+ G V S+ + AL+DMY KCG L
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDL------ 315
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+KA +LFEG+ + D +WN MI G+S +
Sbjct: 316 --------------------------DKARDLFEGICEK----DIISWNVMIGGYSHMNS 345
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN-KDESMAT 187
EA LF KMQ + + P+ S+L ACA L AL LGK H ++ + L + S+ T
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A++ F +KP WNAMISG +G A+E+F M+ E
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV VLSAC HAG V+ Q F+ M +D+ + PK +H+GCM+DLLGR+G DEA
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAE 523
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L++ + +P +++ SLLGAC H N +LGE A L E+EPENP +V+LSNIYA G
Sbjct: 524 ALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAG 583
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW+DV RIR +ND+ + K+PG S+
Sbjct: 584 RWDDVARIRTKLNDKGMKKVPGCSS 608
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 15/382 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS TF ++ +CA + Q G+Q+HG LK+ +SD + T+L++MY + G L A
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+ +++ +I G L G + A LFE + D +WN+MI+G++Q G
Sbjct: 189 VFSK-SSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR----DAVSWNAMIAGYAQSG 243
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F++M+ + P+ + +VLSACA +L+LG + L + +
Sbjct: 244 RFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR F+ I D WN MI GY Y+ A+ +F MQQ V
Sbjct: 304 ALIDMYSKCGDLDKARDLFEG--ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV 361
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV++L AC + G +D I +D F + ++D+ + G ++ A+
Sbjct: 362 EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAK 421
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++ +++++ H ++++ E+ M+ + EP++ T +LS +AG
Sbjct: 422 QVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAG 481
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
L ++GR M+ D ++
Sbjct: 482 L---VELGRQCFSSMVEDYDIS 500
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 85/395 (21%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDM--YLKCGCLPCAHNVFQEL 72
++++S C S L +Q+H +K + + L++ G L A +F+ +
Sbjct: 36 LTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ N WNTMI G NS+ S S +G A
Sbjct: 93 E-QPNQFIWNTMIRG-----------------------------NSLSS--SPVG----A 116
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ +M G+ P+ +L +CA + A + GK+ HGHV++ L D + T+LI+M
Sbjct: 117 IDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINM 176
Query: 193 YMKCGQPSW-------------------------------ARRFFDQFEIKPDDPAFWNA 221
Y + G+ + ARR F++ ++ D WNA
Sbjct: 177 YAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR--DAVSWNA 234
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI+GY ++G +E A+ F M++ V PN ++ V VLSAC +G ++ + + ++D
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDH- 293
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
GL ++D+ + G LD+AR+L + E + ++ ++G + H+NS E +A
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG-YSHMNS-YKEALA 351
Query: 342 M--KLQE--MEPENPTPFVIL-SNIYAG---LGRW 368
+ K+Q+ +EP + T IL + Y G LG+W
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 217/384 (56%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVT S++ AC+ L L+ GR +HG ++ + + +ALV +Y +C + A
Sbjct: 230 KPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARL 289
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R++++WN ++ N +K + LF ++ +G + D ATWN++I G + G
Sbjct: 290 VF-DLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEADEATWNAVIGGCMENG 348
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++ KMQ+ G P+ ++S L AC+ L +L++GKE H +V R L D + T
Sbjct: 349 QTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMT 408
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG + +R FD I D WN MI +G + +F+ M Q +
Sbjct: 409 ALVYMYAKCGDLNLSRNVFDM--ICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGI 466
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPNS +F VLS C H+ V++ LQIF M D ++P H+ CMVD+ R+GRL EA
Sbjct: 467 KPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAY 526
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I+ +P EPT S + +LLGAC + N +L + A KL E+EP NP +V L NI
Sbjct: 527 EFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAK 586
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W + R ++ +R +TK PG S
Sbjct: 587 LWSEASEARILMKERGITKTPGCS 610
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 39/280 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ F++V AC + ++VH ++ SD +G AL+ Y KC C+ A
Sbjct: 129 KPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARR 188
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L +++++W +M + + G + +F + G KP+ T
Sbjct: 189 VFDDLV-VKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVT------------ 235
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++S+L AC++L LK G+ HG +R + ++ + +
Sbjct: 236 -----------------------LSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCS 272
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S+Y +C AR FD + D WN +++ Y N EY+ + +F M + V
Sbjct: 273 ALVSLYARCLSVKQARLVFDLMPHR--DVVSWNGVLTAYFTNREYDKGLALFSQMSSKGV 330
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ + A++ AV+ C G +KA+++ M + G KP Q
Sbjct: 331 EADEATWNAVIGGCMENGQTEKAVEMLRKM-QNLGFKPNQ 369
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G +A +LF+ + +PDP T +++IS F+ G+ EA +L+ +++ G+ P
Sbjct: 80 GDFRRAQQLFDNIP----QPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVF 135
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+V AC KE H IR + D + ALI Y KC ARR FD +
Sbjct: 136 LTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVV 195
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--K 269
K D W +M S Y G + +F M VKPNS + ++L AC + +
Sbjct: 196 K--DVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGR 253
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
A+ F + G+ +V L R + +AR + +P V ++ +L A +
Sbjct: 254 AIHGFAVRH---GMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYF 310
Query: 330 CHLNSDLG 337
+ D G
Sbjct: 311 TNREYDKG 318
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +PN +T S + AC+ L L+ G++VH + D TALV MY KCG L
Sbjct: 363 LGFKPNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNL 422
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ NVF ++ ++++ WNTMI ++G + + LFE + G KP+ T+ ++SG S
Sbjct: 423 SRNVF-DMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCS 481
Query: 125 QLGMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ E ++F M +V C+ V S L E + + R +
Sbjct: 482 HSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRL------HEAYEFIQRMPME 535
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
S AL+ A+ ++ FEI+P++P + ++ + + A E
Sbjct: 536 PTASAWGALLGACRVYKNVELAKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEAR 595
Query: 240 DLMQQEKV 247
LM++ +
Sbjct: 596 ILMKERGI 603
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 228/387 (58%), Gaps = 14/387 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPCA 65
+ TF SV+SACA++ G+ VHG ++++ ++ + ALV Y KCG + A
Sbjct: 293 DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVA 352
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +++++WNT+++G + + +KA+E+FE + ++ + +W M+SG+
Sbjct: 353 RRIFDNMT-LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYK----NELSWMVMVSGYVH 407
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A KLF KM+S + P ++AC +L ALK GK+ HGH+++ S
Sbjct: 408 GGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSA 467
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
ALI+MY +CG A F + P+ D WNAMIS G++G A+E+FD M
Sbjct: 468 GNALITMYARCGAVKEAHLMF---LVMPNIDSVSWNAMISALGQHGHGREALELFDRMVA 524
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E + P+ SF+ VL+AC H+G VD+ + F M DFG+ P ++H+ ++DLLGR+GR+
Sbjct: 525 EGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIG 584
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EAR+LI+ +P EPT S++ ++L C + +LG A +L +M P++ +++LSN Y+
Sbjct: 585 EARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTYS 644
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G W D R+R+++ DR + K PG S
Sbjct: 645 AAGCWVDAARVRKLMRDRGVKKEPGCS 671
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 153/313 (48%), Gaps = 21/313 (6%)
Query: 6 SDEPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
S P+ +F +++SA L + ++ Q+H LK + ALV +Y+KC
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211
Query: 64 C---AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A V E+ +++ LTW TM+ G + G A +FE + +G K D WN+MI
Sbjct: 212 ATRDARKVLDEMP-NKDDLTWTTMVVGYVRRGDVGAARSVFEEV--DG-KFD-VVWNAMI 266
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG+ GM EAF+LF +M + TSVLSACA++ GK HG +IR N
Sbjct: 267 SGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPN 326
Query: 181 KDESMA----TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
A AL++ Y KCG + ARR FD +K D WN ++SGY + + AV
Sbjct: 327 FVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK--DVVSWNTILSGYVESSCLDKAV 384
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
E+F+ M + N S++ ++S H G + AL++F M + +KP + +
Sbjct: 385 EVFEEMPYK----NELSWMVMVSGYVHGGFAEDALKLFNKMRSE-NVKPCDYTYAGAIAA 439
Query: 297 LGRSGRLDEAREL 309
G G L ++L
Sbjct: 440 CGELGALKHGKQL 452
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 122/274 (44%), Gaps = 41/274 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T+ I+AC L L+ G+Q+HG +++ + G AL+ MY +CG + AH
Sbjct: 427 KPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHL 486
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ +WN MI+ + +G +A+ELF+ + EG PD ++ ++++ + G
Sbjct: 487 MFLVMPNIDSV-SWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSG 545
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F+ FE M+ G++P E
Sbjct: 546 LVDEGFRYFESMKRDFGIIPG-----------------------------------EDHY 570
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T LI + + G+ AR +P P+ W A++SG +G+ E D Q K
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPFEP-TPSIWEAILSGCRTSGDMELGAHAAD--QLFK 627
Query: 247 VKP-NSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ P + +++ + + AG A ++ +M D
Sbjct: 628 MTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRD 661
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 27/336 (8%)
Query: 49 GTALVDMYLKCGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
T+LV Y LP A + F + R+ + N +I+ + A+ +F L
Sbjct: 91 ATSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLAS 150
Query: 108 G-FKPDPATWNSMISG---FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
G +PD ++ +++S + +R A +L + +G LS C L A
Sbjct: 151 GSLRPDDYSFTALLSAGGHLPNISVRHCA-QLHCSVLKSG-------AGGALSVCNALVA 202
Query: 164 LKLGKET------HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
L + E+ V+ NKD+ T ++ Y++ G AR F++ + K D
Sbjct: 203 LYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFD--V 260
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG---HVDKALQIF 274
WNAMISGY +G A E+F M E+V + +F +VLSAC + G H
Sbjct: 261 VWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
+ +F + +V + G + AR + + V ++++L ++ S
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSG---YVES 377
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++ +EM +N ++++ + Y G ED
Sbjct: 378 SCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAED 413
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 226/391 (57%), Gaps = 11/391 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYL--QFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGC 61
L +PN VTFI+++S CA L G +H T K+ + + M+GTALVDMY KCG
Sbjct: 4 LEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGH 63
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ + F ELK +N +WNTMI G + NG+ +A+E+F+ + G +W +I+
Sbjct: 64 VELSRLCFDELK-VKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGV----ISWTVLIN 118
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
GF ++G+ EA + F KMQ + + P + +VLSACA+L AL LG H + ++ L
Sbjct: 119 GFVKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRD 178
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + +LI +Y +CG AR+ F++ + WN++I G NG E A+E FDL
Sbjct: 179 NVKICNSLIDLYSRCGAIELARQVFEKMGERT--LVSWNSIIGGLAANGFTEEALEHFDL 236
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ++ KPN SF L+AC H G VD+ L+ F +M+ + P+ EH+GC+VDL R+G
Sbjct: 237 MQKQGFKPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAG 296
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RL++A +++ +P +P V SLL AC + +L E + L ++P + +V+LSN
Sbjct: 297 RLEDAMSVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSN 356
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
IYA +GRW+ + R + + K PG S+
Sbjct: 357 IYAAVGRWDGACKQRMTMKALGIQKKPGFSS 387
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 222/387 (57%), Gaps = 10/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI--GTALVDMYLKCGCLPCA 65
P+ V +S+++ A ++ G+ +H ++ + TAL+DMY KCG L A
Sbjct: 222 RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLA 281
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F L + +++W MIAG + + R E+A LF+ + D W +M+S ++Q
Sbjct: 282 RQLFNGLT-QKTVVSWTAMIAGCIRSNRLEEARALFDSTQNR----DVMIWTAMLSAYAQ 336
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+AF LF++M+++G+ P+ + S+LS CA AL LGK H ++ + + D +
Sbjct: 337 ANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCIL 396
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL+ MY KCG + A R F E D WNA+I+G+ +G E A++IF M+++
Sbjct: 397 NTALVDMYAKCGDINAAGRLF--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQ 454
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKPN +F+ +L AC HAG V + ++F M FGL P+ EH+GCMVDLLGR+G LDE
Sbjct: 455 GVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDE 514
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I+ +P +P V+ +L+ AC H N LGE A +L E+EPEN V++SNIYA
Sbjct: 515 AHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAA 574
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
RW D +R+ + + K PG S
Sbjct: 575 ANRWSDAAGVRKTMKTVGMKKEPGHSV 601
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 130/291 (44%), Gaps = 45/291 (15%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
SV+ AC + + Q G+++HG LK D +G AL+ MY +C C+ A VF ++
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMM-E 187
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R++++W+TMI + N + A+EL + +P SM++ F
Sbjct: 188 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLF------------ 235
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM--ATALISMY 193
AD + +++GK H +VIR N+ + TAL+ MY
Sbjct: 236 -----------------------ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 272
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR+ F+ K W AMI+G R+ E A +FD Q V
Sbjct: 273 AKCGHLGLARQLFNGLTQK--TVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV----MI 326
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ A+LSA A +D+A +F M G++P + ++ L +G LD
Sbjct: 327 WTAMLSAYAQANCIDQAFNLFDQMRTS-GVRPTKVTIVSLLSLCAVAGALD 376
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 111/228 (48%), Gaps = 16/228 (7%)
Query: 108 GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
G P A WN +I+ +++ A ++ +++ SVL AC +S +LG
Sbjct: 85 GLSPS-AQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLG 143
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
KE HG V++ L++D + AL+ MY +C +AR FD+ + D W+ MI
Sbjct: 144 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK--MMERDVVSWSTMIRSLS 201
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKP 285
RN E++ A+E+ M +V+P+ + V++++ ++ KA+ + + + +
Sbjct: 202 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSN----- 256
Query: 286 KQEHFG-----CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
EH G ++D+ + G L AR+L L + TV + +++ C
Sbjct: 257 -NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 303
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQ-----VH--GLTLKIEKQSDTMIGTALVDMYLKCG 60
+PN +TFI ++ AC+ + G++ VH GL +IE +VD+ + G
Sbjct: 457 KPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYG------CMVDLLGRAG 510
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSE----KAMELFEGLAHEGFKPDPATW 116
L AH + + + N + W ++A L+ + A +L E +P+ +
Sbjct: 511 LLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLE------IEPENCGY 564
Query: 117 NSMISGFSQLGMRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
N ++S R+ +A + + M++ GM + SV+ + +G ++H +
Sbjct: 565 NVLMSNIYAAANRWSDAAGVRKTMKTVGM--KKEPGHSVIEVNGTVHEFLMGDQSHPQIR 622
Query: 176 RAD 178
R +
Sbjct: 623 RIN 625
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 223/383 (58%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT SV+ + L GRQ+HG +K D + +A++DMY K G + +
Sbjct: 250 PDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKL 309
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E + + N I G+ NG +KA+E+F + + + +W S+I+G +Q G
Sbjct: 310 FDEFEMMETGVC-NAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGK 368
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +MQ G+ P+ + S+L AC +++AL G+ THG +R L D + +A
Sbjct: 369 DIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSA 428
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ ++ F+ K + WN++++GY +G+ + + IF+ + + ++K
Sbjct: 429 LIDMYAKCGRIKMSQIVFNMMPTK--NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLK 486
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF ++LSACG G D+ + F MM +++G+KP+ EH+ CMV+LLGR+G+L EA +
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+E+P EP V+ +LL +C N DL E A KL +EPENP +V++SNIYA G
Sbjct: 547 LIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGM 606
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V IR + L K PG S
Sbjct: 607 WTEVDSIRNKMESLGLKKNPGCS 629
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 155/299 (51%), Gaps = 4/299 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ ++ CA L + G+Q+H + D + +L MY++CG + A V
Sbjct: 114 PDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKV 173
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++T + ++ G G E+ + + + G +P+ +WN ++SGF++ G
Sbjct: 174 FDRMS-EKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGY 232
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F+KM G P V+SVL + D L +G++ HG+VI+ L KD+ + +A
Sbjct: 233 HKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISA 292
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY K G + FD+FE+ + NA I+G RNG + A+E+F L +++K++
Sbjct: 293 MLDMYGKSGHVYGIIKLFDEFEMM--ETGVCNAYITGLSRNGLVDKALEMFGLFKEQKME 350
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
N S+ ++++ C G +AL++F M G+KP + M+ G L R
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNRVTIPSMLPACGNIAALGHGR 408
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 123/248 (49%), Gaps = 12/248 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT S++ AC ++ L GR HG +++ D +G+AL+DMY KCG + +
Sbjct: 385 KPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQI 444
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++N++ WN+++ G ++G++++ M +FE L KPD ++ S++S Q+G
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F M + G+ P L+ C+ ++L L +E + + D
Sbjct: 504 LTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKL------QEAYDLIKEIPFEPDS 557
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ A + F ++P++P + M + Y G + I + M
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKM 617
Query: 243 QQEKVKPN 250
+ +K N
Sbjct: 618 ESLGLKKN 625
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 5/201 (2%)
Query: 111 PDPATWN--SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
PDP ++ S+I ++ + ++ +F +M S G++P + ++ CA+LSA K GK
Sbjct: 77 PDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGK 136
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+ H + L+ D + +L MYM+CG+ AR+ FD+ K D +A++ GY R
Sbjct: 137 QIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEK--DVVTCSALLCGYAR 194
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G E V I M++ ++PN S+ +LS +G+ +A+ +F M G P Q
Sbjct: 195 KGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKM-HHLGFCPDQV 253
Query: 289 HFGCMVDLLGRSGRLDEAREL 309
++ +G S L+ R++
Sbjct: 254 TVSSVLPSVGDSENLNMGRQI 274
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 227/416 (54%), Gaps = 39/416 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V+ ACA + G QVHGL++K QS+ + A++DMY KCG L A VF
Sbjct: 361 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 420
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELF---------------------------- 101
+E+ SR+ ++WN +IA NG EK + LF
Sbjct: 421 EEMV-SRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCG 479
Query: 102 -----EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
E L + +WN++ISGFS EA K F KM G+ P ++L
Sbjct: 480 MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILD 539
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-D 215
CA+L ++LGK+ H +I+ +L D +++ L+ MY KCG + F FE P+ D
Sbjct: 540 TCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGN---MQDFQLIFEKAPNRD 596
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WNAM+ GY ++G E A++IF+ MQ E VKPN A+F+AVL ACGH G V+K L F
Sbjct: 597 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 656
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M ++GL P+ EH+ C+VD++GRSG++ +A ELI +P E ++ +LL C H N
Sbjct: 657 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNV 716
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ E+ A + ++EPE+ +V+LSNIYA G W +V ++R+M+ L K PG S
Sbjct: 717 EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 772
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 160/366 (43%), Gaps = 36/366 (9%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV +CA L L+ G Q+HG LK + +D +IGTA +DMY+KC L A +F L
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL 336
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMEL------------------FEGLAHEGF----- 109
+ N+ ++N +I G RS+K + L EGL G
Sbjct: 337 P-NHNLQSYNAIIVGY---ARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSL 392
Query: 110 -KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+ + N+++ + + G EA +FE+M S V + + + L L
Sbjct: 393 CQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF- 451
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
H +I++ L D + ALI MY KCG A + D+ + WNA+ISG+
Sbjct: 452 -IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFSL 508
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
+ E A + F M + V P++ ++ +L C + V+ QI + L+
Sbjct: 509 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAY 567
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+VD+ + G + + + + + P +++++ H LGEE + M+
Sbjct: 568 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH---GLGEEALKIFEYMQ 624
Query: 349 PENPTP 354
EN P
Sbjct: 625 LENVKP 630
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 173/407 (42%), Gaps = 99/407 (24%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF V+ +C+SL G Q+HGL +K+ D + G+AL+DMY KC L C+ F
Sbjct: 173 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFF 232
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ +N ++W+ +IAG + N +EL
Sbjct: 233 HSMP-EKNWVSWSAIIAGCVQNDDLRGGLEL----------------------------- 262
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
F++MQ G+ S SV +CA LSAL+LG + HGH ++ D D + TA
Sbjct: 263 ------FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN-------------------- 229
+ MYMKC S A++ F+ + + +NA+I GY R+
Sbjct: 317 LDMYMKCNNLSDAQKLFN--SLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAV 374
Query: 230 --GEYES------------------AVEIFD------------LMQQEKVKPNSASFVAV 257
G+ E A I D L+ +E V ++ S+ A+
Sbjct: 375 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 434
Query: 258 LSACGHAGHVDKALQIFT---MMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIREL 313
++A G+ +K L +F ++ GL G ++D+ + G +++A +L L
Sbjct: 435 IAAHEQNGNEEKTLSLFIHNRIIKSRLGL---DSFVGIALIDMYSKCGMMEKAEKLHDRL 491
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL 358
E TV +++++ S+ ++ K+ EM +P+N T IL
Sbjct: 492 AEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 538
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF + C+ L G+Q H + E + + L+ MY+KC L A VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++WN M+ G G A +LF+ + D +WNS+ISG+ G +
Sbjct: 104 P-QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNGDHRKV 158
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+F +M G V VL +C+ L G + HG ++ + D +AL+ M
Sbjct: 159 IDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDM 218
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + + +FF K + W+A+I+G +N + +E+F MQ+ V + +
Sbjct: 219 YAKCKKLDCSIQFFHSMPEK--NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQS 276
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F +V +C + Q+ + DFG +D+ + L +A++L
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFN 334
Query: 312 ELPEPTVSVYHSLL 325
LP + Y++++
Sbjct: 335 SLPNHNLQSYNAII 348
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 126/247 (51%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T+ +++ CA+L+ ++ G+Q+H +K E QSD I + LVDMY KCG +
Sbjct: 528 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 587
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F++ +R+ +TWN M+ G +G E+A+++FE + E KP+ AT+ +++ +G
Sbjct: 588 IFEKAP-NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMG 646
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ + F M S G+ P L+ CV ++ +S AL+L + D
Sbjct: 647 LVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL-------IEGMPFEAD 699
Query: 183 ESMATALISMYMKCGQPSWARR-FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ L+S+ G A + + +++P+D A + + + Y G + ++ +
Sbjct: 700 AVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKM 759
Query: 242 MQQEKVK 248
M+ +K
Sbjct: 760 MRFNGLK 766
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
K + + C+D AL GK+ H +I + + LI MY+KC +A + FD
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ D WNAM+ GY G+ A ++FD M + V S+ +++S H G
Sbjct: 103 MPQR--DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV----VSWNSLISGYLHNGDHR 156
Query: 269 KALQIFTMM 277
K + +F M
Sbjct: 157 KVIDVFLQM 165
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 195/316 (61%), Gaps = 7/316 (2%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN+ TWNTMI G G+ +A LF+ + K DP +W +MI+G+SQ G FEA +L
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMP----KRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F +M+ G + +S LS CAD+ AL+LGK+ HG +++ + AL+ MY K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A F E+ D WN MI+GY R+G E A+ F+ M++E +KP+ A+ V
Sbjct: 457 CGSIEEANDLFK--EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
AVLSAC H G VDK Q F M D+G+ P +H+ CMVDLLGR+G L++A L++ +P
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
EP +++ +LLGA H N++L E A K+ MEPEN +V+LSN+YA GRW DVG++
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 375 RQMINDRQLTKLPGIS 390
R + D+ + K+PG S
Sbjct: 635 RVRMRDKGVKKVPGYS 650
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 12/244 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F S +S CA ++ L+ G+Q+HG +K ++ +G AL+ MY KCG + A+++F
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLF 467
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E+ G ++I++WNTMIAG +G E A+ FE + EG KPD AT +++S S G+
Sbjct: 468 KEMAG-KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 130 FEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ + F M Q G++P+ + C+ +L L ++ H + D ++
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG------LLEDAHNLMKNMPFEPDAAI 580
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
L+ G A D+ F ++P++ + + + Y +G + ++ M+
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 245 EKVK 248
+ VK
Sbjct: 641 KGVK 644
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 143/303 (47%), Gaps = 29/303 (9%)
Query: 26 YLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y++ GR L K + ++ ++ YL+ G A +F E+ R++++WN M
Sbjct: 74 YMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP-ERDLVSWNVM 132
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
I G + N KA ELFE + D +WN+M+SG++Q G +A +F++M
Sbjct: 133 IKGYVRNRNLGKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
V ++LSA S + E + ++ N L+ ++K + AR+
Sbjct: 189 VS----WNALLSAYVQNSKM----EEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FFD ++ D WN +I+GY ++G+ + A ++FD E + ++ A++S
Sbjct: 241 FFDSMNVR--DVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVSGYIQN 294
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYH 322
V++A ++F M P++ L G + R++ A+EL +P VS ++
Sbjct: 295 RMVEEARELFDKM-------PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWN 347
Query: 323 SLL 325
+++
Sbjct: 348 TMI 350
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 120/284 (42%), Gaps = 30/284 (10%)
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G +I WN I+ M GR +A+ +F+ + + ++N MISG+ + G A
Sbjct: 60 GDSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELAR 115
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KLF++M P V+ + + LGK I + +D ++S Y
Sbjct: 116 KLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE--RDVCSWNTMLSGY 167
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA- 252
+ G AR FD+ K D WNA++S Y +N + E A +F K + N A
Sbjct: 168 AQNGCVDDARSVFDRMPEKND--VSWNALLSAYVQNSKMEEACMLF------KSRENWAL 219
Query: 253 -SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
S+ +L + +A Q F M+ + ++ +SG++DEAR+L
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMN-----VRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
E P V + +++ ++ + + EE +M N +
Sbjct: 275 ESPVQDVFTWTAMVSG---YIQNRMVEEARELFDKMPERNEVSW 315
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQV-HGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+P+ T ++V+SAC+ + GRQ + +T ++ +VD+ + G L AH
Sbjct: 507 KPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAH 566
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
N+ + + + W T++ ++G + EL E A + F +P
Sbjct: 567 NLMKNMPFEPDAAIWGTLLGASRVHGNT----ELAETAADKIFAMEP 609
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/416 (35%), Positives = 228/416 (54%), Gaps = 37/416 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V+ AC+ L+ G Q+HG K+ + +G L+ +Y KCGCLP A V
Sbjct: 131 PDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCV 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
E++ S+++++WN+M+AG N + + A+++ + KPD T
Sbjct: 191 LDEMQ-SKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSS 249
Query: 116 --------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
WN MIS + + M ++ L+ +M + P SVL
Sbjct: 250 ENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC DLSAL LG+ H +V R L + + +LI MY +CG A+R FD+ + + D
Sbjct: 310 RACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR--D 367
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
A W ++IS YG G+ +AV +F MQ P+S +FVA+LSAC H+G +++ F
Sbjct: 368 VASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFK 427
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M DD+ + P EHF C+VDLLGRSGR+DEA +I+++P +P V+ +LL +C + N
Sbjct: 428 QMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVYSNM 487
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A KL ++ PE +V+LSNIYA GRW +V IR ++ R++ K+PGIS
Sbjct: 488 DIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGIS 543
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 117/246 (47%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+++T SV+ AC L L GR++H + + + ++ +L+DMY +CGCL A
Sbjct: 299 EPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKR 358
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K R++ +W ++I+ + G+ A+ LF + + G PD + +++S S G
Sbjct: 359 VFDRMK-FRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSG 417
Query: 128 MRFEAFKLFEKM----QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F++M + T ++ C+ +L + E + + + + +E
Sbjct: 418 LLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVD------EAYNIIKQMPMKPNE 471
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+S D+ ++ P++ ++ + + Y + G + I LM
Sbjct: 472 RVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLM 531
Query: 243 QQEKVK 248
++ +++
Sbjct: 532 KRRRIR 537
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
+ VH + + +G L+ Y G A NVF ++ RN++ +N MI M
Sbjct: 52 KNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVF-DVIPERNVIFYNVMIRSYMN 110
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
N + A+ +F + GF PD T+
Sbjct: 111 NHLYDDALLVFRDMVSGGFSPDHYTY---------------------------------- 136
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
VL AC+ L++G + HG V + L+ + + LI++Y KCG AR D+ +
Sbjct: 137 -PCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQ 195
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
K D WN+M++GY +N +++ A++I M + KP++ + ++L A
Sbjct: 196 SK--DVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPA 243
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
L+ + VL D+ LK H V +++ S+ L+ Y G+P AR FD
Sbjct: 35 LELLGKVLDQYPDIKTLK---NVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFD 91
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
I + F+N MI Y N Y+ A+ +F M P+ ++ VL AC + ++
Sbjct: 92 V--IPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNL 149
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
LQ+ + GL ++ L G+ G L EAR ++ E+ V ++S++
Sbjct: 150 RIGLQLHGAV-FKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVA 207
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 267 bits (683), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 224/384 (58%), Gaps = 5/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S T SV++ CA + ++ G++ H L + QS++++G ALV+MY KC + A
Sbjct: 266 EPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQM 325
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + R++ TWN +I+G ++EK EL + + +GF+P+ TWN +I+G+ +
Sbjct: 326 AFDGVS-ERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENK 384
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF +MQ + P + V +L+AC+ L+ ++ GK+ H + IRA + D +
Sbjct: 385 QYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGA 444
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG R ++ I + NAM++ Y +G E + +F M KV
Sbjct: 445 ALVDMYAKCGDVKHCYRVYNM--ISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKV 502
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+AVLS+C HAG ++ + +M + + P +H+ CMVDLL R+G+L EA
Sbjct: 503 RPDHVTFLAVLSSCVHAGSLEIGHECLALM-VAYNVMPSLKHYTCMVDLLSRAGQLYEAY 561
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ LP E +++LLG C+ H DLGE A KL E+EP NP +V+L+N+YA G
Sbjct: 562 ELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYASAG 621
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W + + RQ++ D + K PG S
Sbjct: 622 KWHYLTQTRQLMKDMGMQKRPGCS 645
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 68/394 (17%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
F V+ C L ++ GRQ+HG+ LK + G + A +F
Sbjct: 153 VFPVVLKICCGLCAVELGRQMHGMALKHD------------------GDMKSAFEMFSRF 194
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ ++N MIAG NG KA ELF+ + EG + D +WNSMISG+ + EA
Sbjct: 195 S-RKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEA 253
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ LF + G+ P + SVL+ CAD+++++ GKE H I L + + AL+ M
Sbjct: 254 YSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEM 313
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR------------------------ 228
Y KC A+ FD + D WNA+ISGY R
Sbjct: 314 YSKCQDIVAAQMAFDG--VSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVY 371
Query: 229 -----------NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
N +Y+SA+++F MQ ++P+ + +L+AC + + Q+
Sbjct: 372 TWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHA-- 429
Query: 278 DDDFGLKPKQE---HFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+ ++ + H G +VD+ + G + + + P + ++++L A H +
Sbjct: 430 ---YSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGH 486
Query: 334 SDLGEEMAMKL--QEMEPENPTPFVILSN-IYAG 364
+ G + ++ ++ P++ T +LS+ ++AG
Sbjct: 487 GEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAG 520
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 164/398 (41%), Gaps = 61/398 (15%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ P+S T+ S++ +C S + G+Q+H ++K + + T L+ MY +
Sbjct: 47 EPPSSTTYASILDSCGSPI---LGKQLHAHSIKSGFNAHEFVTTKLLQMYAR-------- 95
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
N E A +F+ + +W +++ + ++
Sbjct: 96 ------------------------NCSFENACHVFDTMPLRNLH----SWTALLRVYIEM 127
Query: 127 GMRFEAFKLFEKMQSTGMVPSLK--CVTSVLSACADLSALKLGKETHGHVIRADLN---- 180
G EAF LFE++ G+ L VL C L A++LG++ HG ++ D +
Sbjct: 128 GFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSA 187
Query: 181 ---------KDESMATALISMYMKCGQPSWARRFFDQFEIK--PDDPAFWNAMISGYGRN 229
K + A+I+ Y + G A+ FD+ E + D WN+MISGY
Sbjct: 188 FEMFSRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDG 247
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
++ A +F + +E ++P+S + +VL+ C + + + ++ GL+
Sbjct: 248 SLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVR-GLQSNSIV 306
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
G +V++ + + A+ + E + +++L+ + + E++ Q+M
Sbjct: 307 GGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISG---YARCNQAEKIRELHQKMRR 363
Query: 350 ENPTPFVILSN-IYAGLGRWEDVGRIRQMINDRQLTKL 386
+ P V N I AG + Q+ + Q+ L
Sbjct: 364 DGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANL 401
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 222/416 (53%), Gaps = 38/416 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ AC+ L G Q+HG +K+ + IG LV MY KC L A V
Sbjct: 135 PDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRV 194
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
E+ G R++++WN+M+AG NGR A++L + KPD T
Sbjct: 195 LDEMPG-RDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSC 253
Query: 116 --------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
WN MI+ + M EA L+ +MQ G+ P ++SVL
Sbjct: 254 DNVLYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVL 313
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC DLSA LG+ H +V R L + + ALI MY KCG AR FDQ + D
Sbjct: 314 PACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFR--D 371
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
W +MIS YG +G+ + AV +F M+ P+ +FV+VL+AC HAG VD+ F
Sbjct: 372 VVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFN 431
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
+M ++G+ P EH+ CMVDLLGR+G++DEA L R++P EP V+ SLL AC + +
Sbjct: 432 LM-AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSM 490
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ A L ++ PE +V+LSNIYA GRW+DV +R ++N + + K+PG S
Sbjct: 491 NIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNS 546
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP++V+ SV+ AC L GR++H + + + + ++ AL+DMY KCGCL A
Sbjct: 303 EPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARA 362
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R++++W +MI+ ++G+ + A+ LF+ + GF PD + S+++ S G
Sbjct: 363 VFDQMM-FRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAG 421
Query: 128 MRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ E F M G+ P ++ C+ +L + E + + + +E
Sbjct: 422 LVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKID------EAYHLTRQMPMEPNER 475
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +L+S + A D F++ P+ ++ + + Y + G ++ + +M
Sbjct: 476 VWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMN 535
Query: 244 QEKVK 248
+ +K
Sbjct: 536 SKGIK 540
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N MI + G+ +A +F+ M + G P VL AC+ L +G + HG V+
Sbjct: 105 FNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVV 164
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ L+ + + L+SMY KC ARR D E+ D WN+M++GY +NG + A
Sbjct: 165 KLGLDMNLYIGNGLVSMYGKCKWLDAARRVLD--EMPGRDMVSWNSMVAGYAQNGRFNDA 222
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE---HFGC 292
+++ M+ K+KP++ + ++L A + D L + D +K K++ +
Sbjct: 223 LKLCREMEDLKLKPDAGTMGSLLPAVTNTS-CDNVLYV-----KDMFVKLKEKSLISWNV 276
Query: 293 MVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGAC 328
M+ + + +EA +L ++ EP S+L AC
Sbjct: 277 MIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 165 KLGKETHGHV-IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
K K+ H + I +L+ + S+ L+ Y CG+P + R FD EI + F+N MI
Sbjct: 52 KTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFD--EITDKNVVFFNVMI 109
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
Y NG Y+ A+ +F M + P++ ++ VL AC +G++ LQI + GL
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAV-VKLGL 168
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+V + G+ LD AR ++ E+P + ++S++
Sbjct: 169 DMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVA 211
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 225/416 (54%), Gaps = 37/416 (8%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT S++SA A ++ G++ H ++ +SD ++ +++DMY KC + A VF
Sbjct: 383 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 442
Query: 70 QE--------------------LKGSR--------------NILTWNTMIAGMMLNGRSE 95
L G N+++WN++I G + NG+
Sbjct: 443 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 502
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A ++F + GF+P+ TW ++ISG +Q G +EA F+KMQ G+ PS+ +TSVL
Sbjct: 503 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVL 562
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC D+ +L G+ HG + R + +AT+L+ MY KCG A++ F K +
Sbjct: 563 LACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK--E 620
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMIS Y +G+ A+ +F +Q+E ++P+S +F ++LSAC HAG V++ L +F
Sbjct: 621 LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFA 680
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M + P EH+GC+V LL R G LDEA LI +P +P + SLL AC H
Sbjct: 681 DMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEI 740
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LGE ++ L ++EP N +V LSN YA GRW +V +R ++ R L K PG S
Sbjct: 741 ELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCS 796
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 167/380 (43%), Gaps = 53/380 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +V+ AC SL + G+ VHG LK+ + + ++LVDMY KCG L A V
Sbjct: 180 PDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKV 239
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + + + TWNSMI G+ Q G+
Sbjct: 240 FDSM------------------------------------VEKNVVTWNSMIVGYVQNGL 263
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M+ G+ P+ V S LSA A+L AL GK+ H I L+ D + ++
Sbjct: 264 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 323
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I+ Y K G A F + K D WN +IS Y ++ + A+ + LM+ E ++
Sbjct: 324 IINFYSKVGLIEDAELVFSRMLEK--DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 381
Query: 249 PNSASFVAVLSACGHAGHVDKALQ-----IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+S + ++LSA ++ + I ++ D + ++D+ + R+
Sbjct: 382 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVA------NSIIDMYAKCERI 435
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN-IY 362
D+AR++ E + ++++LL A + L E +M+ ++ P VI N +
Sbjct: 436 DDARKVFDSTTERDLVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI 492
Query: 363 AGLGRWEDVGRIRQMINDRQ 382
G R V + M + Q
Sbjct: 493 LGFLRNGQVNEAKDMFSQMQ 512
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 170/381 (44%), Gaps = 44/381 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT S +SA A+L L G+Q H + + D ++G+++++ Y K G + A
Sbjct: 280 EPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAEL 339
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D TWN +IS + Q
Sbjct: 340 VFSRM------------------------------------LEKDVVTWNLLISSYVQHH 363
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + M+S + ++S+LSA A S +KLGKE H + IR +L D +A
Sbjct: 364 QVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVAN 423
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I MY KC + AR+ FD D WN +++ Y + G A+++F MQ + V
Sbjct: 424 SIIDMYAKCERIDDARKVFDS--TTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 481
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ +V+ G V++A +F+ M G +P + ++ L +SG EA
Sbjct: 482 PPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEAI 540
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIY 362
+++ E P+++ S+L AC + G + + E P L ++Y
Sbjct: 541 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 600
Query: 363 AGLGRWEDVGRIRQMINDRQL 383
A G ++ ++ M++ ++L
Sbjct: 601 AKCGSIDEAKKVFHMMSSKEL 621
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 136/325 (41%), Gaps = 57/325 (17%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + + T LV Y KC A +F L+
Sbjct: 85 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLR- 143
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W ++ G SE A+ LG
Sbjct: 144 VRNVFSWAAIVGLQCRMGFSEDAL---------------------------LG------- 169
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +MQ G+ P + +VL AC L + LGK HG+V++ ++++L+ MY
Sbjct: 170 -FIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYG 228
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG AR+ FD K + WN+MI GY +NG + A+++F M+ E ++P +
Sbjct: 229 KCGVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTV 286
Query: 255 VAVLSAC--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ LSA G GH A+ I +D D L +++ + G +++A
Sbjct: 287 ASFLSASANLDALIEGKQGH---AIAILNSLDLDNILGSS------IINFYSKVGLIEDA 337
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
+ + E V ++ L+ + H
Sbjct: 338 ELVFSRMLEKDVVTWNLLISSYVQH 362
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD- 178
IS + G E+ L +M+ + +L C AL G++ H +++
Sbjct: 51 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 110
Query: 179 -LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
K+E + T L+ Y KC P A R F + ++ + W A++ R G E A+
Sbjct: 111 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVR--NVFSWAAIVGLQCRMGFSEDALL 168
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----- 292
F MQ+ V P++ VL ACG +LQ+ + G K C
Sbjct: 169 GFIEMQENGVFPDNFVLPNVLKACG-------SLQLIGLGKGVHGYVLKMGFGACVFVSS 221
Query: 293 -MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQE 346
+VD+ G+ G L++AR++ + E V ++S++ ++ + L +E M+++
Sbjct: 222 SLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVG---YVQNGLNQEAIDVFYDMRVEG 278
Query: 347 MEPENPTPFVILS 359
+EP T LS
Sbjct: 279 IEPTRVTVASFLS 291
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 224/384 (58%), Gaps = 5/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S T S+++ A + ++ G+++H + + QS++ +G ALV+MY KC + A
Sbjct: 403 EPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQM 462
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ R+ TWN +I+G + K EL E + +GF+P+ TWNS+++G +
Sbjct: 463 AFDEIS-ERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENK 521
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF +MQ + + P + V +L+AC+ L+ + GK+ H + IRA + D +
Sbjct: 522 QYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGA 581
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + +++ I + NAM++ Y +G E + IF M +V
Sbjct: 582 TLVDMYAKCGSIKHCYQVYNK--ISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRV 639
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F++VLS+C HAG + + F +M + + + P +H+ CMVDLL R+G+LDEA
Sbjct: 640 RPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAY 698
Query: 308 ELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P SV + +LLG C+ H LGE A KL E+EP N +V+L+N+YA G
Sbjct: 699 QLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAG 758
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D+ + R+++ND+ + K PG S
Sbjct: 759 RWHDLAKTRELMNDKGMQKSPGCS 782
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 197/386 (51%), Gaps = 30/386 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L ++ + F V++ C L L+ GRQVHG+ LK ++ +G AL+DMY KCG L
Sbjct: 128 LGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDE 187
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V + + ++ ++WN++I + NG +A++L E + +P+ TW+++I GFS
Sbjct: 188 AKKVLEGMT-QKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFS 246
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E+ +LF +M G+ P + + SVL AC+ + L +GKE HG+++R +L +
Sbjct: 247 SNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGF 306
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A AL+ MY +CG A + F +F K A +N MI GY NG A E+F M+Q
Sbjct: 307 VANALVGMYRRCGDMKSAFKIFSKFARKC--AASYNTMIVGYLENGNVGKAKELFYQMEQ 364
Query: 245 EKVKPNSASFVAVLSACGHAGHVDK-----ALQIFT--MMDDDFGLKPKQEHFGCMVDLL 297
E V+ + S+ ++S GHVD AL +F +M+ G++P G ++
Sbjct: 365 EGVERDRISWNCMIS-----GHVDNFMFDDALMLFRDLLME---GIEPDSFTLGSILTGF 416
Query: 298 G-----RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
R G+ + +++ L S L +C N + +MA E+ +
Sbjct: 417 ADMTCIRQGKEIHSIAIVKGLQSN--SFVGGALVEMYCKCNDIIAAQMA--FDEISERDT 472
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMI 378
+ + + + +G R +G+IR+++
Sbjct: 473 STW---NALISGYARCNQIGKIRELV 495
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 115/269 (42%), Gaps = 43/269 (15%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
S T+ +++ + SL G+Q+H ++K + + T L+ MY
Sbjct: 34 STTYSTILQSSNSL---TLGKQLHSHSIKTGFYNHNFVQTKLLQMY-------------- 76
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+N E A +F+ + + +W +++ +G+ +
Sbjct: 77 ------------------SINSSFEDAWHMFDKMTLKNLH----SWTAVLRLHLNMGLFY 114
Query: 131 EAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F LFE+ G+ L VL+ C L L+LG++ HG V++ + + A
Sbjct: 115 KGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNA 174
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A++ + K D WN++I+ NG A+++ + M +++
Sbjct: 175 LIDMYGKCGSLDEAKKVLEGMTQK--DCVSWNSIITACVANGVVYEALDLLENMLLSELE 232
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMM 277
PN ++ AV+ + +++++F M
Sbjct: 233 PNVVTWSAVIGGFSSNAYDVESVELFARM 261
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 11/223 (4%)
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
++L LGK+ H H I+ + T L+ MY A FD+ +K + W A
Sbjct: 45 NSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLK--NLHSWTA 102
Query: 222 MISGYGRNGEYESAVEIFD--LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
++ + G + +F+ L K + F VL+ C G ++ Q+ M+
Sbjct: 103 VLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLK 162
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC----HLNSD 335
G ++D+ G+ G LDEA++++ + + ++S++ AC + D
Sbjct: 163 H-GFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALD 221
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
L E M L E+EP T ++ + E V +M+
Sbjct: 222 LLENML--LSELEPNVVTWSAVIGGFSSNAYDVESVELFARMV 262
>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 215/370 (58%), Gaps = 5/370 (1%)
Query: 11 SVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ T + V+ A S L +L G++ HG L+ D +GT+L+DMY+K L A VF
Sbjct: 624 TATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVF 683
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+K +RNI WN++++G G E A+ L + EG KPD TWN MISG++ G
Sbjct: 684 DNMK-NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCG 742
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F +MQ G++P+ +T +L ACA LS L+ GKE H IR +D +ATAL
Sbjct: 743 KEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATAL 802
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY K A + F + I+ A WN MI G+ G + A+ +F+ MQ+ V P
Sbjct: 803 IDMYSKSSSLKNAHKVFRR--IQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGP 860
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ +F A+LSAC ++G + + + F M D+ + P+ EH+ CMVDLLGR+G LDEA +L
Sbjct: 861 DAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDL 920
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P +P +++ +LLG+C H N E A L ++EP N ++++ N+Y+ RW
Sbjct: 921 IHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRW 980
Query: 369 EDVGRIRQMI 378
ED+ +R+++
Sbjct: 981 EDMDHLRELM 990
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 136/301 (45%), Gaps = 40/301 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S + + C ++ + G ++HG +K D + AL++ Y +C L A+ VF
Sbjct: 522 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 581
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +L WN I +LN +SEK + E
Sbjct: 582 HEMPNPEALL-WNEAI---ILNLQSEKLQKGVE--------------------------- 610
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSA-CADLSALKLGKETHGHVIRADLNKDESMATA 188
LF KMQ + + + VL A ++L L +GKETHG+V+R + D + T+
Sbjct: 611 -----LFRKMQFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTS 665
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+K + A+ FD +K + WN+++SGY G +E A+ + + M++E +K
Sbjct: 666 LIDMYVKNHSLTSAQAVFDN--MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIK 723
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ ++ ++S G +AL F M + G+ P C++ L + +E
Sbjct: 724 PDLVTWNGMISGYAMWGCGKEALAFFAQMQQE-GVMPNSASITCLLRACASLSLLQKGKE 782
Query: 309 L 309
+
Sbjct: 783 I 783
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS + ++ ACASL LQ G+++H L+++ D + TAL+DMY K L AH V
Sbjct: 759 PNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKV 818
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ ++ + +WN MI G + G ++A+ +F + G PD T+ +++S G+
Sbjct: 819 FRRIQ-NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGL 877
Query: 129 RFEAFKLFEKM-QSTGMVPSLK---CVTSVL 155
E +K F+ M +VP L+ C+ +L
Sbjct: 878 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLL 908
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 26/281 (9%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGF-SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
AM + GL K WNS + F S G ++F+++ G+V + + L
Sbjct: 476 AMVFYVGLPRNYLK-----WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 530
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
C + + LG E HG +I+ + D + AL++ Y +C A + F E+ +
Sbjct: 531 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFH--EMPNPE 588
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN I ++ + + VE+F MQ +K +A+ V VL A L
Sbjct: 589 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQAS------ISELGFLN 642
Query: 276 MMDDDFGLKPKQEHFGC-------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
M + G + F C ++D+ ++ L A+ + + + ++SL+
Sbjct: 643 MGKETHGYVLRN-GFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSG- 700
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNIYAGLGRW 368
+ + E+ L +ME E P V + + +G W
Sbjct: 701 --YSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMW 739
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 228/382 (59%), Gaps = 12/382 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N V++ ++I+ + R++ ++ + + + TA++ Y CG L A +F
Sbjct: 283 NVVSWTTMITGYVQNQQVDIARKL----FEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++++ N MI NG KA ++F+ + + D TW++MI + + G+
Sbjct: 339 NAMP-IKSVVACNAMILCFGQNGEVPKARQVFDQMREK----DEGTWSAMIKVYERKGLE 393
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LF MQ G+ P+ + SVLS CA L+ L G+E H ++R+ + D +A+ L
Sbjct: 394 LDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+SMY+KCG + A++ FD+F +K D WN++I+GY ++G A+ +F M + P
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVK--DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMP 511
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +FV VLSAC + G+V K L+IF M+ + ++ K EH+ CMVDLLGR+G+L+EA +L
Sbjct: 512 DDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDL 571
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I ++P E ++ +LLGAC H+ DL E A KL +EP+N PF++LSNIYA GRW
Sbjct: 572 IEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRW 631
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+DV +R+ + DR+++K PG S
Sbjct: 632 DDVAELRRNMRDRRVSKYPGCS 653
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 156/344 (45%), Gaps = 46/344 (13%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+L+ Y + G + A VF E++ +NI++WN+++AG N R ++A +F+ ++
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMR-DKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA------------ 157
+ +WN ++SG+ GM EA ++F++M +V V +
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 158 -----CADLSALKLGKETHGHVIRA----DL--NKDESMATALISMYMKCGQPSWARRFF 206
+ + G G + A D+ KD T +I Y + G+ AR F
Sbjct: 217 MPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLF 276
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D E+ + W MI+GY +N + + A ++F++M ++ N S+ A+L + G
Sbjct: 277 D--EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGR 330
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
+D+A ++F M P + C M+ G++G + +AR++ ++ E + ++
Sbjct: 331 LDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAM 383
Query: 325 LGACWCH-LNSDLGEEMAMKLQE-MEPENPTPFVILSNIYAGLG 366
+ L D E M +E + P P+ +LS + AGL
Sbjct: 384 IKVYERKGLELDALELFRMMQREGIRPNFPSLISVLS-VCAGLA 426
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN + ISV+S CA L L GR++H ++ + D + + L+ MY+KCG L A V
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++++ WN++I G +G +A+ +F + G PD T+ ++S S G
Sbjct: 470 FDRF-AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528
Query: 129 RFEAFKLFEKMQSTGMVPS----LKCVTSVLSACADLS 162
+ ++F M++ V C+ +L L+
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
NS+I+ +S+LG +A +F++M+ K + S S A K +E +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRD-------KNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
++ L+S Y+ G + AR FD+ + + W AM+ GY + G A
Sbjct: 155 MS-ERNTISWNGLVSGYINNGMINEAREVFDR--MPERNVVSWTAMVRGYVKEGMISEAE 211
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGCMVD 295
+F M ++ N S+ +L G +D+A ++F MM + D + C V
Sbjct: 212 TLFWQMPEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV- 266
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTP 354
GRL EAR L E+P V + +++ + D+ A KL E+ PE N
Sbjct: 267 -----GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDI----ARKLFEVMPEKNEVS 317
Query: 355 FVILSNIYAGLGRWEDVGRI 374
+ + Y GR ++ +
Sbjct: 318 WTAMLKGYTNCGRLDEASEL 337
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 225/417 (53%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC+ L L+ G QVH +K+ ++ IG ALV MY KCGCL A
Sbjct: 134 NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-----GLAHEG-------------- 108
V ++ R++++WN+M+AG +G+ + A+E+ + L H+
Sbjct: 194 VLDQMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTS 252
Query: 109 --------------FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
K + +WN MI+ + M EA LF +M+ GM P + S+
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC DLSAL LG+ H ++ + +L + + AL+ MY KCG AR FD+ ++
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-- 370
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W +M+S YGR+G+ AV +F M P+S +FV+VLSAC H G +D+ F
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
MM + +G+ P+ EHF CMVDL GR+G ++EA I+++P EP V+ +LL AC H
Sbjct: 431 RMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSK 490
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A L ++ P+ +V+LSNIYA G W+DV +R + + K+PGIS
Sbjct: 491 MDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 41/260 (15%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC +P++VT S++ AC L L GR++H K Q + ++ AL+DMY KCG
Sbjct: 297 MEEC-GMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCG 355
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
CL A +VF +++ R++++W +M++ +G+ A+ LF + G PD + S++
Sbjct: 356 CLEEARDVFDKMR-LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
S S G+ + F M + G+VP ++ AC
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF-----AC--------------------- 448
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ ++ + G+ A F Q ++P++ W A++S + + + +
Sbjct: 449 ---------MVDLFGRAGEVEEAYSFIKQMPMEPNERV-WGALLSACRVHSKMDIGLVAA 498
Query: 240 DLMQQEKVKPNSASFVAVLS 259
DL+ Q + P + + +LS
Sbjct: 499 DLLFQ--LAPKQSGYYVLLS 516
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 20/287 (6%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G + A +F+ + + +N MI + + EA +F+ M S P
Sbjct: 85 GETSVARYIFD----RSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
VL AC+ L L++G + H +++ L+ + + AL++MY KCG AR+ DQ
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ D WN+M++GY ++G+++ A+EI M + ++ + +A LS ++
Sbjct: 201 R--DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT-MASLSPVVCYTSLENVQ 257
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE----PTVSVYHSLLGA 327
I M + K + M+ + + +EA L ++ E P SLL A
Sbjct: 258 YIHNMFER--MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN----IYAGLGRWED 370
C LG + + +E N P ++L N +YA G E+
Sbjct: 316 CGDLSALFLGRRLH---KYIEKGNLQPNLLLENALLDMYAKCGCLEE 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
VI L D ++A L+ Y G+ S AR FD+ K + F+N MI Y N Y
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEK--NVVFFNVMIRSYVNNNLYV 119
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A+ IF +M P+ +F VL AC ++ LQ+ + GL +
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFIGNAL 178
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
V + G+ G L EAR+++ ++P V ++S++
Sbjct: 179 VAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 228/382 (59%), Gaps = 12/382 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N V++ ++I+ + R++ ++ + + + TA++ Y CG L A +F
Sbjct: 283 NVVSWTTMITGYVQNQQVDIARKL----FEVMPEKNEVSWTAMLKGYTNCGRLDEASELF 338
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++++ N MI NG KA ++F+ + + D TW++MI + + G+
Sbjct: 339 NAMP-IKSVVACNAMILCFGQNGEVPKARQVFDQMREK----DEGTWSAMIKVYERKGLE 393
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LF MQ G+ P+ + SVLS CA L+ L G+E H ++R+ + D +A+ L
Sbjct: 394 LDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVL 453
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+SMY+KCG + A++ FD+F +K D WN++I+GY ++G A+ +F M + P
Sbjct: 454 LSMYIKCGNLAKAKQVFDRFAVK--DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMP 511
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +FV VLSAC + G+V K L+IF M+ + ++ K EH+ CMVDLLGR+G+L+EA +L
Sbjct: 512 DDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDL 571
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I ++P E ++ +LLGAC H+ DL E A KL +EP+N PF++LSNIYA GRW
Sbjct: 572 IEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRW 631
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+DV +R+ + DR+++K PG S
Sbjct: 632 DDVAELRRNMRDRRVSKYPGCS 653
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 156/344 (45%), Gaps = 46/344 (13%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+L+ Y + G + A VF E++ +NI++WN+++AG N R ++A +F+ ++
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMR-DKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA------------ 157
+ +WN ++SG+ GM EA ++F++M +V V +
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQ 216
Query: 158 -----CADLSALKLGKETHGHVIRA----DL--NKDESMATALISMYMKCGQPSWARRFF 206
+ + G G + A D+ KD T +I Y + G+ AR F
Sbjct: 217 MPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLF 276
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D E+ + W MI+GY +N + + A ++F++M ++ N S+ A+L + G
Sbjct: 277 D--EMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTAMLKGYTNCGR 330
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
+D+A ++F M P + C M+ G++G + +AR++ ++ E + ++
Sbjct: 331 LDEASELFNAM-------PIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTWSAM 383
Query: 325 LGACWCH-LNSDLGEEMAMKLQE-MEPENPTPFVILSNIYAGLG 366
+ L D E M +E + P P+ +LS + AGL
Sbjct: 384 IKVYERKGLELDALELFRMMQREGIRPNFPSLISVLS-VCAGLA 426
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 5/158 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN + ISV+S CA L L GR++H ++ + D + + L+ MY+KCG L A V
Sbjct: 410 PNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQV 469
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++++ WN++I G +G +A+ +F + G PD T+ ++S S G
Sbjct: 470 FDRF-AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGN 528
Query: 129 RFEAFKLFEKMQSTGMVPS----LKCVTSVLSACADLS 162
+ ++F M++ V C+ +L L+
Sbjct: 529 VKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLN 566
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 111/260 (42%), Gaps = 26/260 (10%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
NS+I+ +S+LG +A +F++M+ K + S S A K +E +
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRD-------KNIISWNSIVAGYFQNKRPQEAQNMFDK 154
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
++ L+S Y+ G + AR FD+ + + W AM+ GY + G A
Sbjct: 155 MS-ERNTISWNGLVSGYINNGMINEAREVFDR--MPERNVVSWTAMVRGYVKEGMISEAE 211
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGCMVD 295
+F M ++ N S+ +L G +D+A ++F MM + D + C V
Sbjct: 212 TLFWQMPEK----NVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQV- 266
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTP 354
GRL EAR L E+P V + +++ + D+ A KL E+ PE N
Sbjct: 267 -----GRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDI----ARKLFEVMPEKNEVS 317
Query: 355 FVILSNIYAGLGRWEDVGRI 374
+ + Y GR ++ +
Sbjct: 318 WTAMLKGYTNCGRLDEASEL 337
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 231/451 (51%), Gaps = 70/451 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S+T ++V+ A A + L G+ +HG ++ I TAL DMY KCG + A
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARL 304
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
+F + + +++WN+M+ G + NG EKA+ +FE + EG P
Sbjct: 305 IFDGMD-QKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLG 363
Query: 112 -------------------DPATWNSMISGFS---------------------------- 124
D + NS+IS +S
Sbjct: 364 DLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMIL 423
Query: 125 ---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q G EA F +M+S GM P + SV+ A A+LS + K HG +IR+ L+K
Sbjct: 424 GYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDK 483
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+ MY KCG AR+ FD I WNAMI GYG +G +A+++FD
Sbjct: 484 NIFVTTALVDMYSKCGAIHMARKLFDM--ISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ V+PN ++++V+SAC H+G VD+ L+ F M D+GL+P +H+G MVDLLGR+G
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
R+ EA + I +P P ++VY + GAC H N ++GE+ A KL E+ P+ V+L+N
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
IYA +W V +R+ + + L K PG S
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSV 692
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 39/306 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P F ++ C L+ G+++HG + ++ T +V+MY KC + A+
Sbjct: 144 KPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYK 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R++++WNT+IAG NG ++KA+EL + EG +PD T
Sbjct: 204 MFDRMP-ERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSIT------------ 250
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +VL A AD+ L +GK HG+ IRA K +++T
Sbjct: 251 -----------------------LVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIST 287
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KCG AR FD + K WN+M+ GY +NGE E A+ +F+ M +E +
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKT--VVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGI 345
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + + L AC G +++ + + D L ++ + + R+D A
Sbjct: 346 DPTGVTIMEALHACADLGDLERGKFVHKFV-DQLNLGSDISVMNSLISMYSKCKRVDIAS 404
Query: 308 ELIREL 313
++ L
Sbjct: 405 DIFNNL 410
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L +P+S T +SVI A A L + + +HGL ++ + + TALVDMY KCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F ++ R+++TWN MI G +G A++LF+ + +P+ T+ S+IS
Sbjct: 502 HMARKLF-DMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISA 560
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSL 148
S G+ E + F+ M Q G+ PS+
Sbjct: 561 CSHSGLVDEGLRHFKSMKQDYGLEPSM 587
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 12/254 (4%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
A +++M+ G+++ A +M+ + P + T +L C D + LK GKE HG
Sbjct: 113 ALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQ 172
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+I + T +++MY KC Q A + FD+ + D WN +I+G+ +NG +
Sbjct: 173 LITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPER--DLVSWNTIIAGFSQNGFAK 230
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFG 291
A+E+ MQ E +P+S + V VL A G V K++ + + G
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRA---GFAKLVNIST 287
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE- 350
+ D+ + G ++ AR + + + TV ++S++ ++ + E+ ++M E
Sbjct: 288 ALADMYSKCGSVETARLIFDGMDQKTVVSWNSMMDG---YVQNGEPEKAIAVFEKMLEEG 344
Query: 351 -NPTPFVILSNIYA 363
+PT I+ ++A
Sbjct: 345 IDPTGVTIMEALHA 358
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 225/417 (53%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC+ L L+ G QVH +K+ ++ IG ALV MY KCGCL A
Sbjct: 134 NPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARK 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-----GLAHEG-------------- 108
V ++ R++++WN+M+AG +G+ + A+E+ + L H+
Sbjct: 194 VLDQMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTS 252
Query: 109 --------------FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
K + +WN MI+ + M EA LF +M+ GM P + S+
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC DLSAL LG+ H ++ + +L + + AL+ MY KCG AR FD+ ++
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLR-- 370
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W +M+S YGR+G+ AV +F M P+S +FV+VLSAC H G +D+ F
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
MM + +G+ P+ EHF CMVDL GR+G ++EA I+++P EP V+ +LL AC H
Sbjct: 431 RMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHSK 490
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A L ++ P+ +V+LSNIYA G W+DV +R + + K+PGIS
Sbjct: 491 MDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 41/260 (15%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC +P++VT S++ AC L L GR++H K + + ++ AL+DMY KCG
Sbjct: 297 MEEC-GMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCG 355
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
CL A +VF +++ R++++W +M++ +G+ A+ LF + G PD + S++
Sbjct: 356 CLEEARDVFDKMR-LRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVL 414
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
S S G+ + F M + G+VP ++ AC
Sbjct: 415 SACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF-----AC--------------------- 448
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ ++ + G+ A F Q ++P++ W A++S + + + +
Sbjct: 449 ---------MVDLFGRAGEVEEAYSFIKQMPMEPNERV-WGALLSACRVHSKMDIGLVAA 498
Query: 240 DLMQQEKVKPNSASFVAVLS 259
DL+ Q + P + + +LS
Sbjct: 499 DLLFQ--LAPKQSGYYVLLS 516
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 126/287 (43%), Gaps = 20/287 (6%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G + A +F+ + + +N MI + + EA +F+ M S P
Sbjct: 85 GETSVARYIFD----RSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTF 140
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
VL AC+ L L++G + H +++ L+ + + AL++MY KCG AR+ DQ
Sbjct: 141 PCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPY 200
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ D WN+M++GY ++G+++ A+EI M + ++ + +A LS ++
Sbjct: 201 R--DVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGT-MASLSPVVCYTSLENVQ 257
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE----PTVSVYHSLLGA 327
I M + K + M+ + + +EA L ++ E P SLL A
Sbjct: 258 YIHNMFER--MTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPA 315
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN----IYAGLGRWED 370
C LG + + +E N P ++L N +YA G E+
Sbjct: 316 CGDLSALFLGRRLH---KYIEKGNLRPNLLLENALLDMYAKCGCLEE 359
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 3/153 (1%)
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
VI L D ++A L+ Y G+ S AR FD+ K + F+N MI Y N Y
Sbjct: 62 VINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEK--NVVFFNVMIRSYVNNNLYV 119
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A+ IF +M P+ +F VL AC ++ LQ+ + GL +
Sbjct: 120 EALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAI-VKVGLDTNLFIGNAL 178
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
V + G+ G L EAR+++ ++P V ++S++
Sbjct: 179 VAMYGKCGCLREARKVLDQMPYRDVVSWNSMVA 211
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 216/386 (55%), Gaps = 37/386 (9%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +PN VT SV+SACASL L+ GR +HG ++ + +S+ ++ TAL+DMY KC + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R WN +I+G + NG S KA+ELF+ + E P+ AT NS+
Sbjct: 380 FRVFSKTSKQRTA-PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSL------ 432
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
L A A L+ L+ + HG++IR+ +
Sbjct: 433 -----------------------------LPAYAFLTDLQQARNMHGYLIRSGFLSRIEV 463
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT LI +Y KCG A F+ K D W+A+I+GYG +G E+A+ +FD M Q
Sbjct: 464 ATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKPN +F ++L AC HAG VD+ L +F M +D + + +H+ C++DLLGR+GRL+E
Sbjct: 524 GVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEE 583
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELIR + P +V+ +LLG+C H N +LGE A L E+EP N +V+L+NIY+
Sbjct: 584 AYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSA 643
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+GRW D +R M+N+ L K P S
Sbjct: 644 VGRWRDAEHVRLMMNNIGLRKTPAHS 669
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 161/373 (43%), Gaps = 70/373 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ VI AC L + G +H T+ SD + +L+ MY+ CG + A V
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
F +L R +++WNTMI G NG ++A+ +F+ + +G +PD AT
Sbjct: 181 F-DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 116 ----------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMV-------- 145
WNS++ +++ G EA +F +M +V
Sbjct: 240 LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNG 299
Query: 146 -----------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
P+ + SVLSACA L +LK G+ HG IR L +
Sbjct: 300 YILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESE 359
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TALI MY KC + + R F + + P WNA+ISG NG A+E+F M
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAP--WNAIISGCIHNGLSRKAIELFKQM 417
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
E V PN A+ ++L A + +A + + G + E ++D+ + G
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGS 476
Query: 303 LDEARELIRELPE 315
L+ A + +P+
Sbjct: 477 LESAHNIFNGIPK 489
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 160/359 (44%), Gaps = 47/359 (13%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM---IGTALVDMYLKCGCLPCAHN 67
+ + S++ C S + +Q+H T+ + S + ++L Y GC P A
Sbjct: 18 TARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARK 77
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL+ P +WN+MI ++ G
Sbjct: 78 LFDELR------------------------------------NPSLFSWNAMIRMYTNSG 101
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ ++A LF +M ++G P V+ AC D ++G H + + + D +
Sbjct: 102 LSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQ 161
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L++MYM CG+ ARR FD ++ WN MI+GY +NG + A+ +FD M +
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDL--MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG 219
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ A+ V+VL C + ++ ++ +++ L + ++D+ + G +DEA
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVK-NLGEDISVWNSLLDMYAKCGNMDEA 278
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNIYAG 364
+ + E+ + V + +++ LN D + + Q M+ E+ P FV L+++ +
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYI--LNGDARSALLL-CQMMQFESVKPNFVTLASVLSA 334
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 215/385 (55%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +T +S +SAC+ L + G+ HG L+ + + A+++MY+KCG A
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACR 397
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + +WN++IAG + NG E A ++F + D +WN+MI Q
Sbjct: 398 VFDRMLNKTRV-SWNSLIAGFVRNGDMESAWKIFSAMP----DSDLVSWNTMIGALVQES 452
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA +LF MQS G+ + V SAC L AL L K HG++ + D++ D + T
Sbjct: 453 MFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGT 512
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ M+ +CG P A + F++ +K D A W A I G A+E+FD M Q+ +
Sbjct: 513 ALVDMFARCGDPQSAMQVFNKM-VKRDVSA-WTAAIGAMAMEGNGTGAIELFDEMLQQGI 570
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ FVA+L+A H G V++ IF M D +G+ P+ H+GCMVDLLGR+G L EA
Sbjct: 571 KPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEAL 630
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI + EP ++ SLL AC H N D+ A ++ E++PE V+LSNIYA G
Sbjct: 631 SLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAG 690
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW+DV ++R + ++ K+PG S+
Sbjct: 691 RWDDVAKVRLHLKEKGAHKMPGSSS 715
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 161/356 (45%), Gaps = 80/356 (22%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT + VISACA L LQ G QV ++E + + ++ ALVDMY+KCG + A
Sbjct: 237 RPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARK 296
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E +N++ +NT++ S + + G
Sbjct: 297 IFDECV-DKNLVLYNTIM-----------------------------------SNYVRQG 320
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E + +M G P + S +SAC++L + GK HG+V+R L +++
Sbjct: 321 LAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCN 380
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES------------- 234
A+I+MYMKCG+ A R FD+ K WN++I+G+ RNG+ ES
Sbjct: 381 AIINMYMKCGKQEMACRVFDRMLNKT--RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDL 438
Query: 235 ------------------AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
A+E+F +MQ E + + + V V SACG+ G +D A I
Sbjct: 439 VSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGY 498
Query: 277 MDDDFGLKPKQEHFG-----CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+K K HF +VD+ R G A ++ ++ + VS + + +GA
Sbjct: 499 ------IKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGA 548
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 8/261 (3%)
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
++KA+ELF + G ++S+I GFS G+ ++A +F ++ G VP
Sbjct: 87 AQKALELF--IEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPF 144
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
VLSAC +AL G + HG +++ +D + +LI Y +CG+ RR FD+ +
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDK--MSE 202
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ W ++I GY + G Y+ AV +F M + ++PNS + V V+SAC + Q+
Sbjct: 203 RNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQV 262
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
T + + L+ +VD+ + G +D+AR++ E + + +Y++++ ++
Sbjct: 263 CTCI-GELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSN---YVR 318
Query: 334 SDLGEEMAMKLQEMEPENPTP 354
L E+ L EM P P
Sbjct: 319 QGLAREVLAVLGEMLKHGPRP 339
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 38/258 (14%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C+ P++ TF V+SAC L G QVHG +K+ + D + +L+ Y +CG +
Sbjct: 132 CMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEID 191
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
C VF ++ RN+++W S+I G+
Sbjct: 192 CMRRVFDKMS-ERNVVSWT-----------------------------------SLIGGY 215
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
++ G EA LF +M G+ P+ + V+SACA L L+LG++ + +L +
Sbjct: 216 AKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNA 275
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
M AL+ MYMKCG AR+ FD E + +N ++S Y R G + + M
Sbjct: 276 LMVNALVDMYMKCGAIDKARKIFD--ECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEML 333
Query: 244 QEKVKPNSASFVAVLSAC 261
+ +P+ + ++ +SAC
Sbjct: 334 KHGPRPDRITMLSAVSAC 351
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 216/386 (55%), Gaps = 37/386 (9%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +PN VT SV+SACASL L+ GR +HG ++ + +S+ ++ TAL+DMY KC + +
Sbjct: 320 SVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLS 379
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R WN +I+G + NG S KA+ELF+ + E P+ AT NS+
Sbjct: 380 FRVFSKXSKQRTA-PWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSL------ 432
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
L A A L+ L+ + HG++IR+ +
Sbjct: 433 -----------------------------LPAYAFLTDLQQARNMHGYLIRSGFLSRIEV 463
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT LI +Y KCG A F+ K D W+A+I+GYG +G E+A+ +FD M Q
Sbjct: 464 ATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQS 523
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKPN +F ++L AC HAG VD+ L +F M +D + + +H+ C++DLLGR+GRL+E
Sbjct: 524 GVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEE 583
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELIR + P +V+ +LLG+C H N +LGE A L E+EP N +V+L+NIY+
Sbjct: 584 AYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGNTGNYVLLANIYSA 643
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+GRW D +R M+N+ L K P S
Sbjct: 644 VGRWRDAEHVRLMMNNIGLRKTPAHS 669
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 161/373 (43%), Gaps = 70/373 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ VI AC L + G +H T+ SD + +L+ MY+ CG + A V
Sbjct: 121 PDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRV 180
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
F +L R +++WNTMI G NG ++A+ +F+ + +G +PD AT
Sbjct: 181 F-DLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKE 239
Query: 116 ----------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMV-------- 145
WNS++ +++ G EA +F +M +V
Sbjct: 240 LEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNG 299
Query: 146 -----------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
P+ + SVLSACA L +LK G+ HG IR L +
Sbjct: 300 YILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESE 359
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TALI MY KC + + R F + + P WNA+ISG NG A+E+F M
Sbjct: 360 VIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAP--WNAIISGCIHNGLSRKAIELFKQM 417
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
E V PN A+ ++L A + +A + + G + E ++D+ + G
Sbjct: 418 LMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGS 476
Query: 303 LDEARELIRELPE 315
L+ A + +P+
Sbjct: 477 LESAHNIFNGIPK 489
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 161/359 (44%), Gaps = 47/359 (13%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM---IGTALVDMYLKCGCLPCAHN 67
+ + S++ C S + +Q+H T+ + S + ++L Y CGC P A
Sbjct: 18 TARYQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARK 77
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL+ P +WN+MI ++ G
Sbjct: 78 LFDELR------------------------------------NPSLFSWNAMIRMYTNSG 101
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ ++A LF +M ++G P V+ AC D ++G H + + + D +
Sbjct: 102 LSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQ 161
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L++MYM CG+ ARR FD ++ WN MI+GY +NG + A+ +FD M +
Sbjct: 162 NSLMAMYMNCGEMEVARRVFDL--MRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG 219
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ A+ V+VL C + ++ ++ +++ L + ++D+ + G +DEA
Sbjct: 220 IEPDCATVVSVLPVCSYLKELEVGRRVHALVEVK-NLGEDISVWNSLLDMYAKCGNMDEA 278
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNIYAG 364
+ + E+ + V + +++ LN D + + Q M+ E+ P FV L+++ +
Sbjct: 279 QMIFYEMDKRDVVSWTTMMNGYI--LNGDARSALLL-CQMMQFESVKPNFVTLASVLSA 334
>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 217/381 (56%), Gaps = 8/381 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ + LL + G+ VHGL L+I Q D + T+L+ +Y KCG + A VF +
Sbjct: 136 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 195
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R++ +WN ++AG +G + A+ +FE + +W +MISG+SQ G+ +A
Sbjct: 196 T-IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQA 250
Query: 133 FKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
LF++M + +G+ P+ + SVL ACA LS L+ G++ H R LN + S+ AL
Sbjct: 251 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 310
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG AR FD+ + WN MI+ Y G AV F M Q ++P+
Sbjct: 311 AMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPD 370
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F +LS C H+G VD L+ F M + + P+ EH+ C+ DLLGR+GRL EA +L+
Sbjct: 371 DITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLV 430
Query: 311 RELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
E+P P S++ SLL AC H N ++ E A KL +EPEN +V+LSN+YA GRW+
Sbjct: 431 GEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 490
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+V ++R ++ + K PG S
Sbjct: 491 EVDKLRAIVKSQGTKKSPGCS 511
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+KE PN VT +SV+ ACA L L+ GRQ+H L ++ S+ + AL MY KCG
Sbjct: 258 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 317
Query: 61 CLPCAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
L A N F +L + +N++ WNTMI G +A+ F + G +PD T+ +
Sbjct: 318 SLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGL 377
Query: 120 ISGFSQLGMRFEAFKLFEKMQST----GMVPSLKCVTSVLSACADLS 162
+SG S G+ K F M +T V CV +L L+
Sbjct: 378 LSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLA 424
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 226/384 (58%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF VI AC + LQ G HG +K +S + L+ +Y CG + A N+
Sbjct: 110 PNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNM 169
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+++TW +I+G + +G+ A ELF+ + + +P +W ++I+G+ ++G
Sbjct: 170 F-DMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMP----EKNPVSWGALIAGYVRIGF 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F MQ +G + + L+ACA L AL G+ H +V R ++ D + TA
Sbjct: 225 FKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTA 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A FD E+ D + +ISG + + E+A+++F+ MQ E V
Sbjct: 285 LIDMYAKCGCIEMACSVFD--EMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVV 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV VL+AC G VD+ L+IF M + + ++P+ +H+GC+VDLLGR+G+++EA++
Sbjct: 343 PNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQ 402
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++RE+P +P +LL AC H + LGEEM L + ++ V+LSN+YA +
Sbjct: 403 VVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADK 462
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WED +IR+ + D+ + KLPG S+
Sbjct: 463 WEDASKIRKKMEDKNIRKLPGCSS 486
>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 217/381 (56%), Gaps = 8/381 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ + LL + G+ VHGL L+I Q D + T+L+ +Y KCG + A VF +
Sbjct: 173 TFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNM 232
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R++ +WN ++AG +G + A+ +FE + +W +MISG+SQ G+ +A
Sbjct: 233 T-IRDVSSWNALLAGYTKSGCIDAALAIFERMPWRNI----VSWTTMISGYSQSGLAQQA 287
Query: 133 FKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
LF++M + +G+ P+ + SVL ACA LS L+ G++ H R LN + S+ AL
Sbjct: 288 LSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALT 347
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG AR FD+ + WN MI+ Y G AV F M Q ++P+
Sbjct: 348 AMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPD 407
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F +LS C H+G VD L+ F M + + P+ EH+ C+ DLLGR+GRL EA +L+
Sbjct: 408 DITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLV 467
Query: 311 RELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
E+P P S++ SLL AC H N ++ E A KL +EPEN +V+LSN+YA GRW+
Sbjct: 468 GEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQ 527
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+V ++R ++ + K PG S
Sbjct: 528 EVDKLRAIVKSQGTKKSPGCS 548
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 43/302 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +++ V L L+ G QVH L Q ++G+ +V Y G + + +V
Sbjct: 68 PPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSV 127
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F NG E + LF NSMI +++ G
Sbjct: 128 F---------------------NGIGEPSSLLF---------------NSMIRAYARYGF 151
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ M S G VL + +L ++ +GK HG ++R L D +AT+
Sbjct: 152 AERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATS 211
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ + A + FD I+ D + WNA+++GY ++G ++A+ IF+ M
Sbjct: 212 LIILYGKCGEINDAGKVFDNMTIR--DVSSWNALLAGYTKSGCIDAALAIFERMPWR--- 266
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
N S+ ++S +G +AL +F M+ +D G++P ++ + L+ R
Sbjct: 267 -NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGR 325
Query: 308 EL 309
++
Sbjct: 326 QI 327
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+KE PN VT +SV+ ACA L L+ GRQ+H L ++ S+ + AL MY KCG
Sbjct: 295 VKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCG 354
Query: 61 CLPCAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
L A N F +L + +N++ WNTMI G +A+ F + G +PD T+ +
Sbjct: 355 SLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGL 414
Query: 120 ISGFSQLGMRFEAFKLFEKMQST----GMVPSLKCVTSVLSACADLS 162
+SG S G+ K F M +T V CV +L L+
Sbjct: 415 LSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLA 461
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 230/387 (59%), Gaps = 14/387 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPCA 65
+ TF SV+SACA+ + G+ VHG ++++ ++ + ALV +Y K G + A
Sbjct: 297 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 356
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +++++WNT+++G + +G +KA+E+F+ + ++ + +W M+SG+
Sbjct: 357 KRIFDTMN-LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVH 411
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A KLF +M++ + P ++AC +L ALK G++ H H+++ S
Sbjct: 412 GGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA 471
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL++MY KCG + AR F + P+ D WNAMIS G++G A+E+FD M
Sbjct: 472 GNALLTMYAKCGAVNDARLVF---LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 528
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E + P+ SF+ +L+AC HAG VD+ F M DFG+ P ++H+ ++DLLGRSGR+
Sbjct: 529 EGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIG 588
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EAR+LI+ +P EPT S++ ++L C + + + G A +L M P++ +++LSN Y+
Sbjct: 589 EARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYS 648
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D R+R+++ DR + K PG S
Sbjct: 649 AAGRWVDAARVRKLMRDRGVKKEPGCS 675
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 152/311 (48%), Gaps = 21/311 (6%)
Query: 8 EPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC- 64
P+ +F ++ISA + L Q+H LK + + AL+ +Y+KC
Sbjct: 158 RPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 217
Query: 65 --AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A V E+ ++ LTW TM+ G + G A +FE + +G K D WN+MISG
Sbjct: 218 WDARKVLDEMP-DKDDLTWTTMVVGYVRRGDVNAARSVFEEV--DG-KFD-VVWNAMISG 272
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ Q GM +AF+LF +M S + TSVLSACA+ GK HG +IR N
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332
Query: 183 ESMA----TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
A AL+++Y K G+ A+R FD +K D WN ++SGY +G + AVE+
Sbjct: 333 PEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK--DVVSWNTILSGYIDSGCLDKAVEV 390
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F +M + N S++ ++S H G + AL++F M + +KP + + G
Sbjct: 391 FKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAACG 445
Query: 299 RSGRLDEAREL 309
G L R+L
Sbjct: 446 ELGALKHGRQL 456
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 47/277 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T+ I+AC L L+ GRQ+H ++ ++ G AL+ MY KCG + A
Sbjct: 431 KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL 490
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++ +WN MI+ + +G +A+ELF+ + EG PD ++ ++++ + G
Sbjct: 491 VFLVMPNLDSV-SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAG 549
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F FE M+ G+ P E
Sbjct: 550 LVDEGFHYFESMKRDFGISPG-----------------------------------EDHY 574
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLM 242
LI + + G+ AR +P P+ W A++SG NG+ E +A ++F ++
Sbjct: 575 ARLIDLLGRSGRIGEARDLIKTMPFEP-TPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 633
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q + +++ + + AG A ++ +M D
Sbjct: 634 PQ-----HDGTYILLSNTYSAAGRWVDAARVRKLMRD 665
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD-LM 242
S AT+L++ G+ A FFD D NAM+S + R AV +F L+
Sbjct: 93 SPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALL 152
Query: 243 QQEKVKPNSASFVAVLSACGH 263
++P+ SF A++SA G
Sbjct: 153 GSGSLRPDDYSFTALISAVGQ 173
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 221/386 (57%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF +V+++C GRQ+H +K+ ++ +G++L+DMY K G + A
Sbjct: 156 EPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARG 215
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+FQ L + D + ++ISG++QLG
Sbjct: 216 IFQCLP------------------------------------ERDVVSCTAIISGYAQLG 239
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LF ++Q GM + TSVL+A + L+AL GK+ H H++R+++ +
Sbjct: 240 LDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQN 299
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-K 246
+LI MY KCG ++ARR FD + WNAM+ GY ++GE +E+F+LM E K
Sbjct: 300 SLIDMYSKCGNLTYARRIFDTLHERT--VISWNAMLVGYSKHGEGREVLELFNLMIDENK 357
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S + +AVLS C H G DK + IF M ++P +H+GC+VD+LGR+GR++
Sbjct: 358 VKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEA 417
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E ++++P EP+ +++ LLGAC H N D+GE + +L ++EPEN +VILSN+YA
Sbjct: 418 AFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYAS 477
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV +R ++ + +TK PG S
Sbjct: 478 AGRWEDVRSLRNLMLKKAVTKEPGRS 503
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 47/322 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N + +V++ C ++ G++VH +K + T L+ Y+KC L A +
Sbjct: 55 DTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARH 114
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RN+++W +MIS +SQ G
Sbjct: 115 VF-DVMPERNVVSWT-----------------------------------AMISAYSQRG 138
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M +G P+ +VL++C S LG++ H H+I+ + + +
Sbjct: 139 YASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGS 198
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY K G+ AR F + D A+ISGY + G E A+E+F +Q+E +
Sbjct: 199 SLLDMYAKDGKIHEARGIFQC--LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRL 303
+ N ++ +VL+A +D Q+ + L+ + + ++D+ + G L
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHL-----LRSEVPSYVVLQNSLIDMYSKCGNL 311
Query: 304 DEARELIRELPEPTVSVYHSLL 325
AR + L E TV ++++L
Sbjct: 312 TYARRIFDTLHERTVISWNAML 333
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G+ + + +VL+ C A++ G+ H H+I+ + T LI Y+KC
Sbjct: 49 MALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDS 108
Query: 199 PSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
AR FD + P+ + W AMIS Y + G A+ +F M + +PN +F V
Sbjct: 109 LRDARHVFD---VMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATV 165
Query: 258 LSAC-GHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELP 314
L++C G +G V QI + + L + + ++D+ + G++ EAR + + LP
Sbjct: 166 LTSCIGSSGFV-LGRQIHSHI---IKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221
Query: 315 EPTV 318
E V
Sbjct: 222 ERDV 225
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 231/391 (59%), Gaps = 15/391 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ +T SV SACASL ++ G Q+H +K +K ++D ++G ALVDMY KC + A
Sbjct: 249 EPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEAR 308
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + R++++ +M++G + A +F + + + +WN++I+G++Q
Sbjct: 309 LVFDRMP-LRDVVSETSMVSGYAKASSVKAARLMFSNM----MERNVVSWNALIAGYTQN 363
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------N 180
G EA +LF ++ + P+ ++L+ACA+L+ LKLG++ H H+++ +
Sbjct: 364 GENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGED 423
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MYMKCG R F++ + D WNAMI GY +NG A+EIF
Sbjct: 424 SDIFVGNSLIDMYMKCGLVEDGRLVFER--MLERDNVSWNAMIVGYAQNGYGTEALEIFR 481
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M +P+ + + VLSAC HAG V++ F M + GL P ++H+ CMVDLLGR+
Sbjct: 482 EMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRA 541
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G LDEA LI+ +P EP V+ SLL AC H N LG+ +A +L E++P N P+V+LS
Sbjct: 542 GCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLS 601
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA LGRW+DV R+R+ + + K PG S
Sbjct: 602 NMYAELGRWKDVVRVRKQMRQMGVIKQPGCS 632
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 150/305 (49%), Gaps = 7/305 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F ++ C + R VH +K + S+ I LVD+Y KCG L A VF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ RN +WN ++ + G ++A+ LF+ + D +WN+M+SGF+Q
Sbjct: 78 DHMQ-QRNTFSWNAVLGALTKFGALDEALNLFKCMPER----DQCSWNAMVSGFAQRDRF 132
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA + M S V + S LSACA L L +G + HG + ++ + D M +AL
Sbjct: 133 EEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSAL 192
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC + A+R FD +++ + WN++I+ Y +NG A+E+F M ++P
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVR--NIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEP 250
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V SAC + + LQI + + +VD+ + R++EAR +
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310
Query: 310 IRELP 314
+P
Sbjct: 311 FDRMP 315
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 220/383 (57%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T V+ A L + G QVHG +K SD + +A++DMY KCGC+ V
Sbjct: 238 PDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRV 297
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E++ I + N + G+ NG + A+E+F + + + TW S+I+ SQ G
Sbjct: 298 FDEVE-EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGK 356
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ+ G+ P+ + S++ AC ++SAL GKE H +R + D + +A
Sbjct: 357 DLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSA 416
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ ARR FD+ + + WNA++ GY +G+ + +E+F +M Q K
Sbjct: 417 LIDMYAKCGRIQLARRCFDK--MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQK 474
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F VLSAC G ++ + + M ++ G++PK EH+ C+V LL R G+L+EA
Sbjct: 475 PDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYS 534
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+E+P EP V+ +LL +C H N LGE A KL +EP NP +++LSNIYA G
Sbjct: 535 IIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGL 594
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ RIR+++ + L K PG S
Sbjct: 595 WDEENRIREVMKSKGLRKNPGYS 617
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 158/301 (52%), Gaps = 4/301 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ S I +CASL L G+Q+H +D+++ ++L MYLKC + A +
Sbjct: 102 PDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKL 161
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++ W+ MIAG G E+A ELF + G +P+ +WN M++GF G
Sbjct: 162 FDRMP-DRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGF 220
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M G P V+ VL A L + +G + HG+VI+ L D+ + +A
Sbjct: 221 YDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSA 280
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG R FD E++ + NA ++G RNG ++A+E+F+ + +K++
Sbjct: 281 MLDMYGKCGCVKEMSRVFD--EVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKME 338
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N ++ +++++C G +AL++F M +G++P ++ G L +E
Sbjct: 339 LNVVTWTSIIASCSQNGKDLEALELFRDM-QAYGVEPNAVTIPSLIPACGNISALMHGKE 397
Query: 309 L 309
+
Sbjct: 398 I 398
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 139/270 (51%), Gaps = 25/270 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+VT S+I AC ++ L G+++H +L+ D +G+AL+DMY KCG + A
Sbjct: 373 EPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARR 432
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ + N+++WN ++ G ++G++++ ME+F + G KPD T+ ++S +Q G
Sbjct: 433 CFDKMS-ALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNG 491
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E ++ + M + G+ P ++ C+ ++LS L +E + + D
Sbjct: 492 LTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKL------EEAYSIIKEMPFEPDA 545
Query: 184 SMATALISM-----YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ AL+S + G+ + + FF ++P +P + + + Y G ++ I
Sbjct: 546 CVWGALLSSCRVHNNLSLGEIAAEKLFF----LEPTNPGNYILLSNIYASKGLWDEENRI 601
Query: 239 FDLMQQEKVKPNSA-SFVAVLSACGHAGHV 267
++M+ + ++ N S++ V GH H+
Sbjct: 602 REVMKSKGLRKNPGYSWIEV----GHKVHM 627
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 127/284 (44%), Gaps = 40/284 (14%)
Query: 18 ISAC--ASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
+S C +S L RQ H L L++ SDT + T+L+ Y
Sbjct: 5 LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFY------------------- 45
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
N L+ +T + ++ L L H P +++S+I F++
Sbjct: 46 ANALSLST----------PQLSLTLSSHLPH----PTLFSFSSLIHAFARSHHFPHVLTT 91
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F + ++P + S + +CA L AL G++ H + D +A++L MY+K
Sbjct: 92 FSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLK 151
Query: 196 CGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
C + AR+ FD+ PD D W+AMI+GY R G E A E+F M+ V+PN S+
Sbjct: 152 CDRILDARKLFDRM---PDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSW 208
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
+L+ G+ G D+A+ +F MM G P C++ +G
Sbjct: 209 NGMLAGFGNNGFYDEAVGMFRMMLVQ-GFWPDGSTVSCVLPAVG 251
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 225/416 (54%), Gaps = 37/416 (8%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT S++SA A ++ G++ H ++ +SD ++ +++DMY KC + A VF
Sbjct: 1478 DSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVF 1537
Query: 70 QE--------------------LKGSR--------------NILTWNTMIAGMMLNGRSE 95
L G N+++WN++I G + NG+
Sbjct: 1538 DSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVN 1597
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A ++F + GF+P+ TW ++ISG +Q G +EA F+KMQ G+ PS+ +TSVL
Sbjct: 1598 EAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVL 1657
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC D+ +L G+ HG + R + +AT+L+ MY KCG A++ F K +
Sbjct: 1658 LACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSK--E 1715
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMIS Y +G+ A+ +F +Q+E ++P+S +F ++LSAC HAG V++ L +F
Sbjct: 1716 LPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFA 1775
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M + P EH+GC+V LL R G LDEA LI +P +P + SLL AC H
Sbjct: 1776 DMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEI 1835
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LGE ++ L ++EP N +V LSN YA GRW +V +R ++ R L K PG S
Sbjct: 1836 ELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCS 1891
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 167/380 (43%), Gaps = 53/380 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +V+ AC SL + G+ VHG LK+ + + ++LVDMY KCG L A V
Sbjct: 1275 PDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKV 1334
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + + + TWNSMI G+ Q G+
Sbjct: 1335 FDSM------------------------------------VEKNVVTWNSMIVGYVQNGL 1358
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M+ G+ P+ V S LSA A+L AL GK+ H I L+ D + ++
Sbjct: 1359 NQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSS 1418
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I+ Y K G A F + K D WN +IS Y ++ + A+ + LM+ E ++
Sbjct: 1419 IINFYSKVGLIEDAELVFSRMLEK--DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLR 1476
Query: 249 PNSASFVAVLSACGHAGHVDKALQ-----IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+S + ++LSA ++ + I ++ D + ++D+ + R+
Sbjct: 1477 FDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVA------NSIIDMYAKCERI 1530
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN-IY 362
D+AR++ E + ++++LL A + L E +M+ ++ P VI N +
Sbjct: 1531 DDARKVFDSTTERDLVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI 1587
Query: 363 AGLGRWEDVGRIRQMINDRQ 382
G R V + M + Q
Sbjct: 1588 LGFLRNGQVNEAKDMFSQMQ 1607
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 170/381 (44%), Gaps = 44/381 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT S +SA A+L L G+Q H + + D ++G+++++ Y K G + A
Sbjct: 1375 EPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAEL 1434
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D TWN +IS + Q
Sbjct: 1435 VFSRM------------------------------------LEKDVVTWNLLISSYVQHH 1458
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + M+S + ++S+LSA A S +KLGKE H + IR +L D +A
Sbjct: 1459 QVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVAN 1518
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I MY KC + AR+ FD D WN +++ Y + G A+++F MQ + V
Sbjct: 1519 SIIDMYAKCERIDDARKVFDS--TTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSV 1576
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ +V+ G V++A +F+ M G +P + ++ L +SG EA
Sbjct: 1577 PPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLITWTTLISGLAQSGFGYEAI 1635
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIY 362
+++ E P+++ S+L AC + G + + E P L ++Y
Sbjct: 1636 LFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMY 1695
Query: 363 AGLGRWEDVGRIRQMINDRQL 383
A G ++ ++ M++ ++L
Sbjct: 1696 AKCGSIDEAKKVFHMMSSKEL 1716
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 136/325 (41%), Gaps = 57/325 (17%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + + T LV Y KC A +F L+
Sbjct: 1180 LLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLR- 1238
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W ++ G SE A+ LG
Sbjct: 1239 VRNVFSWAAIVGLQCRMGFSEDAL---------------------------LG------- 1264
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +MQ G+ P + +VL AC L + LGK HG+V++ ++++L+ MY
Sbjct: 1265 -FIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYG 1323
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG AR+ FD K + WN+MI GY +NG + A+++F M+ E ++P +
Sbjct: 1324 KCGVLEDARKVFDSMVEK--NVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTV 1381
Query: 255 VAVLSAC--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ LSA G GH A+ I +D D L +++ + G +++A
Sbjct: 1382 ASFLSASANLDALIEGKQGH---AIAILNSLDLDNILG------SSIINFYSKVGLIEDA 1432
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
+ + E V ++ L+ + H
Sbjct: 1433 ELVFSRMLEKDVVTWNLLISSYVQH 1457
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 109/253 (43%), Gaps = 25/253 (9%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD- 178
IS + G E+ L +M+ + +L C AL G++ H +++
Sbjct: 1146 ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGD 1205
Query: 179 -LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
K+E + T L+ Y KC P A R F + ++ + W A++ R G E A+
Sbjct: 1206 FFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVR--NVFSWAAIVGLQCRMGFSEDALL 1263
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----- 292
F MQ+ V P++ VL ACG +LQ+ + G K C
Sbjct: 1264 GFIEMQENGVFPDNFVLPNVLKACG-------SLQLIGLGKGVHGYVLKMGFGACVFVSS 1316
Query: 293 -MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQE 346
+VD+ G+ G L++AR++ + E V ++S++ ++ + L +E M+++
Sbjct: 1317 SLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVG---YVQNGLNQEAIDVFYDMRVEG 1373
Query: 347 MEPENPTPFVILS 359
+EP T LS
Sbjct: 1374 IEPTRVTVASFLS 1386
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 225/386 (58%), Gaps = 10/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VT +SV+SACA + L GR+V + E + + A +DM++KCG + A +
Sbjct: 341 PNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGL 400
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R++++W T+I G A ++F+ + + D WN +ISG+ Q G
Sbjct: 401 FDNME-KRDVVSWTTIIDGYAKMSEHGIARDIFDSMP----RKDIPAWNVLISGYEQSGR 455
Query: 129 RFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA +F ++Q T G P + S LSACA L A+ +G+ HG++ + + + ++A
Sbjct: 456 PKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLA 515
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY K G A F I D W+AMI+G +G E+A+E+F MQ+ +
Sbjct: 516 TSLIDMYSKSGDVEKAIEVFHS--IGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPNS +F +L AC H+G VD+ ++F M+ +G+ PK +H+ CMVD+LGR+G L+EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I +P P+ SV+ +LLGAC H N +L E+ +L E+EP N +V+LSN+YA
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKT 693
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G WE V +RQ + D L K G S+
Sbjct: 694 GDWEGVSELRQQMRDSGLKKETGCSS 719
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 167/373 (44%), Gaps = 70/373 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +I A A G+ VHG+ +K D + +L+ Y CG L A+ V
Sbjct: 238 PNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLV 297
Query: 69 FQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+ ++G +++I++WN+M+ G + G +KA++LFE + +EG P+ T
Sbjct: 298 FEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVT------------ 345
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SV+SACA L LG++ ++ R ++ + ++
Sbjct: 346 -----------------------MVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCN 382
Query: 188 ALISMYMKCGQPSWARRFFDQFEI------------------------------KPDDPA 217
A I M++KCG+ AR FD E + D PA
Sbjct: 383 ATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPA 442
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEK--VKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN +ISGY ++G + A+ IF +Q K +P+ + ++ LSAC G +D I
Sbjct: 443 -WNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
+ + ++ + ++D+ +SG +++A E+ + V V+ +++ H +
Sbjct: 502 YIKKE-RIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGE 560
Query: 336 LGEEMAMKLQEME 348
E+ + +QE +
Sbjct: 561 AAIELFLDMQETQ 573
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGK 168
+P+ +WN +I + ++ +F +M + P+ ++ A A+ +GK
Sbjct: 201 QPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGK 260
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
HG I+ D + +LI Y CG A F+ E D WN+M++G+ +
Sbjct: 261 AVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQ 320
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G + A+++F+ M+ E V PN+ + V+V+SAC ++ ++ +D + +
Sbjct: 321 GGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRN-EMMMNLN 379
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+D+ + G ++ AR L + + V + +++
Sbjct: 380 VCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTII 416
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 221/386 (57%), Gaps = 9/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T + V+SACA +FGR VH + + A++DMY KCG + A
Sbjct: 234 KPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKR 293
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++I++W TM+ G G + A +F+ + ++ D A WN++IS + Q G
Sbjct: 294 LFDKMP-EKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ----DIAAWNALISAYEQCG 348
Query: 128 MRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA +LF ++Q S P + S LSACA L A+ LG H ++ + + + +
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A F E K D W+AMI+G +G + A+ +F MQ++K
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERK--DVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN+ +F +L AC H G V++ F M+ +G+ P +H+ CMVD+LGR+G L+EA
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 526
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI ++P P SV+ +LLGAC H N L E+ +L E+EP N +V+LSNIYA
Sbjct: 527 VELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKA 586
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G+W+ V +R+++ D L K PG S+
Sbjct: 587 GKWDRVSGLRKLMRDVGLKKEPGCSS 612
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 178/415 (42%), Gaps = 71/415 (17%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D P+ TF +I A + L L G+ HG+ +K+ SD I +L+ Y KCG L +
Sbjct: 132 DFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY 191
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + R++++WN+MI + G E+A+ELF+ + + KP+ G + +
Sbjct: 192 RVFVNIP-RRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN---------GITMV 241
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G VLSACA S + G+ H ++ R + + +++
Sbjct: 242 G--------------------------VLSACAKKSDFEFGRWVHSYIERNRIGESLTLS 275
Query: 187 TALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPA 217
A++ MY KCG A+R FD+ F+ P+ D A
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIA 335
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKV-KPNSASFVAVLSACGHAGHVDKALQIFTM 276
WNA+IS Y + G+ + A+E+F +Q K KP+ + V+ LSAC G +D I
Sbjct: 336 AWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVY 395
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
+ G+K ++D+ + G L +A + + V V+ +++ H +
Sbjct: 396 IKKQ-GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKD 454
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK--LPGI 389
+ K+QE + P V +NI V R N +L LPG+
Sbjct: 455 AIALFSKMQE-DKVKPNA-VTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGV 507
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 135/331 (40%), Gaps = 56/331 (16%)
Query: 9 PNSVTF-----------ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL 57
PNS+T +S+I C+ L +Q+H L+ D + L+
Sbjct: 22 PNSITLNNDRYFANHPTLSLIDQCSETKQL---KQIHAQMLRTGLFFDPFSASRLITAAA 78
Query: 58 --KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK-PDPA 114
L A VF ++ N+ TWNT+I + +++ +F + H+ PD
Sbjct: 79 LSPFPSLDYAQQVFDQIPHP-NLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKF 137
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV 174
T+ +I A ++L L GK HG V
Sbjct: 138 TFPFLI-----------------------------------KAASELEELFTGKAFHGMV 162
Query: 175 IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
I+ L D + +LI Y KCG+ R F I D WN+MI+ + + G E
Sbjct: 163 IKVLLGSDVFILNSLIHFYAKCGELGLGYRVF--VNIPRRDVVSWNSMITAFVQGGCPEE 220
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
A+E+F M+ + VKPN + V VLSAC + + + ++ + + M+
Sbjct: 221 ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERN-RIGESLTLSNAML 279
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D+ + G +++A+ L ++PE + + ++L
Sbjct: 280 DMYTKCGSVEDAKRLFDKMPEKDIVSWTTML 310
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 216/383 (56%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S+T +SV+SAC+ L L G++VH ++ + ++ AL+DMY CG + A +
Sbjct: 218 PSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGI 277
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K SR++++W ++ G G+ A F+ + F +W +MI G+ Q+
Sbjct: 278 FDNMK-SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDF----VSWTAMIDGYLQVNR 332
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E LF +MQ+ + P + S+L+ACA L AL+LG+ ++ + ++ D + A
Sbjct: 333 FKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNA 392
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY CG A R F+ + D W A+I G NG E A+++F M + +
Sbjct: 393 LIDMYFNCGNVEKAIRIFNAMPHR--DKISWTAVIFGLAINGYGEEALDMFSQMLKASIT 450
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + + VL AC H+G VDK + F M G++P H+GCMVDLLGR+G L EA E
Sbjct: 451 PDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHE 510
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P +P V+ SLLGAC H + ++ E A ++ E+EPEN +V+L NIYA R
Sbjct: 511 VIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNR 570
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE + +R+++ DR + K PG S
Sbjct: 571 WEKLHEVRKLMMDRGIKKTPGCS 593
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ WN+MI G+S++G A ++ +M G++P +L +A+K G+E
Sbjct: 82 PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H+++ + + + ALI +Y G+ S AR FD+ D WN MISGY R+
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS--KGDVVTWNVMISGYNRSK 199
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+++ ++++FD M++ +V P+S + V+VLSAC ++ ++ + D ++P +
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYV-KDLKIEPVRVLE 258
Query: 291 GCMVDLLGRSGRLDEA 306
++D+ G +D A
Sbjct: 259 NALIDMYAACGDMDTA 274
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 74/340 (21%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ ++ ++ GR++H +K+ S+ + AL+ +Y G + A V
Sbjct: 117 PDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGV 176
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++TWN MI+G + + +++M+LF
Sbjct: 177 FDR-SSKGDVVTWNVMISGYNRSKQFDESMKLF--------------------------- 208
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++M+ ++PS + SVLSAC+ L L +GK H +V + + A
Sbjct: 209 --------DEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260
Query: 189 LISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPA 217
LI MY C GQ AR +FD+ + D
Sbjct: 261 LIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPER--DFV 318
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
W AMI GY + ++ + +F MQ +KP+ + V++L+AC H G ++ I +
Sbjct: 319 SWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYI 378
Query: 278 DDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPE 315
D + + K + F ++D+ G +++A + +P
Sbjct: 379 DKN---EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPH 415
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +S+++ACA L L+ G + K E + D+ +G AL+DMY CG + A
Sbjct: 349 KPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIR 408
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+ ++W +I G+ +NG E+A+++F + PD T ++ + G
Sbjct: 409 IFNAMP-HRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSG 467
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
M + K F +M + G+ P++ C+ +L L KE H + + +
Sbjct: 468 MVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHL------KEAHEVIKNMPVKPNS 521
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +L+ A Q E++P++ A + + + Y +E E+ LM
Sbjct: 522 IVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLM 581
Query: 243 QQEKVK 248
+K
Sbjct: 582 MDRGIK 587
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 226/390 (57%), Gaps = 15/390 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT SV+SACA L + GRQVH +K ++ + D ++ ALVDMY KCG A
Sbjct: 246 PDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKC 305
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R++++ +MI G + A +F + + WN +I+ ++
Sbjct: 306 VFDRM-AIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNV----VAWNVLIATYAHNS 360
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES--- 184
EA +LF +++ + P+ +VL+ACA+L+ L+LG++ H HV++ D
Sbjct: 361 EEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPES 420
Query: 185 ---MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+ MY+K G S + F++ + D WNAMI GY +NG + A+ +F+
Sbjct: 421 DVFVGNSLVDMYLKTGSISDGAKVFERMAAR--DNVSWNAMIVGYAQNGRAKDALLLFER 478
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M +P+S + + VLSACGH+G V + + F M +D G+ P ++H+ CM+DLLGR+G
Sbjct: 479 MLCSNERPDSVTMIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAG 538
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L E ELI +P EP ++ SLLGAC H N D+GE A KL E++P+N P+V+LSN
Sbjct: 539 HLKEVEELIENMPMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSN 598
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA LG+W DV R+R+ + R ++K PG S
Sbjct: 599 MYAELGKWADVFRVRRSMKHRGVSKQPGCS 628
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 150/339 (44%), Gaps = 71/339 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F S +SACAS + G QVH L K SD IGTALVDMY KC A VF
Sbjct: 146 NAYSFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVF 205
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RNI++WN++I NG ++A+ LF + +GF PD T
Sbjct: 206 DAMP-ERNIVSWNSLITCYEQNGPVDEALALFVRMMKDGFVPDEVT-------------- 250
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
+ SV+SACA L+A + G++ H ++++D +D + A
Sbjct: 251 ---------------------LASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNA 289
Query: 189 LISMYMKCGQPSWARRFFDQFEIKP-----------------------------DDPAFW 219
L+ MY KCG+ A+ FD+ I+ + W
Sbjct: 290 LVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAW 349
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N +I+ Y N E E A+ +F +++E V P ++ VL+AC + ++ Q +
Sbjct: 350 NVLIATYAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLK 409
Query: 280 D---FGLKPKQEHF--GCMVDLLGRSGRLDEARELIREL 313
+ F P+ + F +VD+ ++G + + ++ +
Sbjct: 410 EGFRFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERM 448
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 156/330 (47%), Gaps = 10/330 (3%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
+T + L+ Y + G L A VF + RN ++N +++ GR++ A+ LF +
Sbjct: 49 ETFLLNTLLSAYARLGSLHDARRVFDGMP-HRNTFSYNALLSACARLGRADDALALFGAI 107
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
PD ++N++++ +Q G +A + M + V + S LSACA A
Sbjct: 108 P----DPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+ G++ H V ++ D + TAL+ MY KC +P A++ FD + + WN++I+
Sbjct: 164 RTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPER--NIVSWNSLIT 221
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
Y +NG + A+ +F M ++ P+ + +V+SAC + Q+ T M +
Sbjct: 222 CYEQNGPVDEALALFVRMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVKSDRFR 281
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL 344
+VD+ + GR EA+ + + +V S++ ++++G+ A+ L
Sbjct: 282 EDMVLNNALVDMYAKCGRTWEAKCVFDRMAIRSVVSETSMITG--YAKSANVGDAQAVFL 339
Query: 345 QEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
Q +E +N + +L YA E+ R+
Sbjct: 340 QMVE-KNVVAWNVLIATYAHNSEEEEALRL 368
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/417 (35%), Positives = 218/417 (52%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC+ + GR++HG K+ S +G LV MY KCG L A
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
V E+ R++++WN+++ G N R + A+E+ + D T
Sbjct: 197 VLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN MI + + M EA +L+ +M++ G P +TSV
Sbjct: 256 TENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSV 315
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC D SAL LGK+ HG++ R L + + ALI MY KCG AR F+ +K
Sbjct: 316 LPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN--MKSR 373
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W AMIS YG +G AV +F +Q + P+S +FV L+AC HAG +++ F
Sbjct: 374 DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCF 433
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M D + + P+ EH CMVDLLGR+G++ EA I+++ EP V+ +LLGAC H +
Sbjct: 434 KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+D+G A KL ++ PE +V+LSNIYA GRWE+V IR ++ + L K PG S
Sbjct: 494 TDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH + + + ++ +G L+ Y + A VF E+ RN++ N MI +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP-ERNVIIINVMIRSYVN 117
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
NG F G E K+F M + P
Sbjct: 118 NG--------FYG---------------------------EGVKVFGTMCGCNVRPDHYT 142
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
VL AC+ + +G++ HG + L+ + L+SMY KCG S AR D E
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--E 200
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
+ D WN+++ GY +N ++ A+E+ M+ K+ ++ + ++L A +
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 128 MRFEAFKLFEKMQSTGMVPSLKC-----------VTSVLSACADLSALKLGKETHGHVIR 176
+ F F+ F+ + + +P L+ + VL D+ L+ H +I
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLR---TVHSRIIL 67
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
DL + S+ L+ Y + AR+ FD EI + N MI Y NG Y V
Sbjct: 68 EDLRCNSSLGVKLMRAYASLKDVASARKVFD--EIPERNVIIINVMIRSYVNNGFYGEGV 125
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
++F M V+P+ +F VL AC +G + +I GL +V +
Sbjct: 126 KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA-TKVGLSSTLFVGNGLVSM 184
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLL 325
G+ G L EAR ++ E+ V ++SL+
Sbjct: 185 YGKCGFLSEARLVLDEMSRRDVVSWNSLV 213
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 225/383 (58%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++T ++ ACA L G Q HG +K + D + +LV MY G + A +V
Sbjct: 115 PDNITHPFLVKACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ + ++++W MIAG G ++ A ELF+ + TW++MISG+++
Sbjct: 175 FQRM-CRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNL----VTWSTMISGYARNNC 229
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A + FE +Q+ G+V + + V+S+CA L AL +G++ H +V+R L+ + + TA
Sbjct: 230 FEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTA 289
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY +CG A F+Q K D W A+I+G +G E A+ F M ++
Sbjct: 290 VVDMYARCGNVEKAVMVFEQLPEK--DVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFV 347
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P +F AVL+AC HAG V++ L+IF M D G++P+ EH+GCMVDLLGR+G+L +A +
Sbjct: 348 PRDITFTAVLTACSHAGMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEK 407
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ ++P +P ++ +LLGAC H N ++GE + L EM+PE +V+LSNIYA +
Sbjct: 408 FVLKMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANK 467
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV +RQM+ D+ + K PG S
Sbjct: 468 WKDVTVMRQMMKDKGVRKPPGYS 490
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ +N++I G S +F + K G++P ++ ACA L +G +T
Sbjct: 80 PNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQT 139
Query: 171 HGHVIRADLNKDESMATALISMYM-------------------------------KCGQP 199
HG I+ +D + +L+ MY +CG
Sbjct: 140 HGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDA 199
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
AR FD+ + + W+ MISGY RN +E AVE F+ +Q E V N V V+S
Sbjct: 200 KSARELFDR--MPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVIS 257
Query: 260 ACGHAGHV---DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
+C H G + +KA + +M + L +VD+ R G +++A + +LPE
Sbjct: 258 SCAHLGALAMGEKAHEY--VMRNKLSLNLILG--TAVVDMYARCGNVEKAVMVFEQLPEK 313
Query: 317 TVSVYHSLLGACWCH 331
V + +L+ H
Sbjct: 314 DVLCWTALIAGLAMH 328
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/402 (36%), Positives = 227/402 (56%), Gaps = 26/402 (6%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVH-------GLTLKIEKQSDTMIGTALV 53
M++ S PN T +S +SAC +L L+ G+++H G T+KI G ALV
Sbjct: 224 MQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIKI--------GNALV 275
Query: 54 DMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
DMY KCG L A +F ++ + ++ W +M++G + G+ ++A ELFE D
Sbjct: 276 DMYCKCGHLSIAREIFNDMP-IKTVICWTSMVSGYVNCGQLDEARELFE----RSPVRDV 330
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
W +MI+G+ Q +A LF +MQ + P + ++L+ CA L L+ GK HG+
Sbjct: 331 VLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGY 390
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+ + D + TALI MY KCG + F+ +K D A W ++I G NG+
Sbjct: 391 IDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNG--LKEKDTASWTSIICGLAMNGKTS 448
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A+E+F M Q VKP+ +F+ VLSAC H G V++ + F M + ++PK EH+GC+
Sbjct: 449 KALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCL 508
Query: 294 VDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
+DLLGR+G+LDEA ELI + P E V +Y +LL AC H N ++GE +A +L +E
Sbjct: 509 IDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIES 568
Query: 350 ENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+ + +L+NIYA RWEDV ++R+ + D + K+PG S+
Sbjct: 569 GDSSVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSS 610
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 153/347 (44%), Gaps = 68/347 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V A L ++ G +V+G +K + DT + +L+DMY + G + V
Sbjct: 130 PDNFTYPFVFKAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQV 189
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQLG 127
F+E+ R++++WN +I+G + R E A+++F + + +P+ AT
Sbjct: 190 FEEMP-QRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEAT------------ 236
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSAC L L+LGKE H +V R L +
Sbjct: 237 -----------------------VVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGN 272
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKP-----------------------------DDPAF 218
AL+ MY KCG S AR F+ IK D
Sbjct: 273 ALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVL 332
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + ++ AV +F MQ ++V P+ + VA+L+ C G +++ I +D
Sbjct: 333 WTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYID 392
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + ++++ + G ++++ E+ L E + + S++
Sbjct: 393 EN-KIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSII 438
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 224/394 (56%), Gaps = 33/394 (8%)
Query: 26 YLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E K + T +V Y K G + A +F E+ RN ++W M
Sbjct: 186 YCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLF-EVMPERNEVSWTAM 244
Query: 85 IAGMMLNGRSEKAMELFE-----------------GLA---------HEGFKP-DPATWN 117
+ G +GR ++A ELFE GLA EG K D TWN
Sbjct: 245 LMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWN 304
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI F + G+ EA LF +MQ G+ + + SVLS CA L++L G++ H ++R+
Sbjct: 305 AMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRS 364
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ ++D +A+ LI+MY+KCG A+ F++F K D WN+MI+GY ++G E A+
Sbjct: 365 EFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK--DVVMWNSMITGYSQHGLGEEALN 422
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F M V+P+ +F+ VLSAC ++G V + +IF M + ++P EH+ CMVDLL
Sbjct: 423 VFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLL 482
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+GR+DEA EL+ ++P EP V+ +LLGAC H+ DL E KL ++EP+N P+V
Sbjct: 483 GRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYV 542
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS++YA GRW DV +R+ IN R++ K PG S
Sbjct: 543 LLSHMYATKGRWRDVEVLRKKIN-RRVIKFPGCS 575
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 75/136 (55%), Gaps = 1/136 (0%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + ISV+S CASL L GRQVH ++ E D + + L+ MY+KCG L A +F
Sbjct: 334 NFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIF 393
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++++ WN+MI G +G E+A+ +F + G +PD T+ ++S S G
Sbjct: 394 NRFL-FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKV 452
Query: 130 FEAFKLFEKMQSTGMV 145
E F++FE M+ T V
Sbjct: 453 KEGFEIFEAMKCTYQV 468
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 31/254 (12%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN +++N MI+G + NG A ++F+ + + +W SM+ G+ Q GM EA KL
Sbjct: 81 RNTVSFNGMISGYVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAEKL 136
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL--NKDESMATALISMY 193
F +M +V + +L A KL D+ KD + T +I Y
Sbjct: 137 FWEMPRRNVVSWTVMIGGLLKESRIDDAKKL----------FDMIPEKDVVVVTNMIGGY 186
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+ G+ AR FD+ +++ + W M+SGY +NG + A ++F++M + N S
Sbjct: 187 CQVGRLDEARELFDEMKVR--NVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVS 240
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIR 311
+ A+L +G + +A ++F M P + C M+ G +G + AR +
Sbjct: 241 WTAMLMGYTQSGRMKEAFELFEAM-------PVKWIVACNEMILQFGLAGEMHRARMMFE 293
Query: 312 ELPEPTVSVYHSLL 325
+ E +++++
Sbjct: 294 GMKERDEGTWNAMI 307
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 165/391 (42%), Gaps = 65/391 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N+V+F +IS + R+V + + + + T++V Y++ G + A
Sbjct: 80 QRNTVSFNGMISGYVKNGMVADARKV----FDVMPERNVVSWTSMVRGYVQEGMVEEAEK 135
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ RN+++W MI G++ R + A +LF+ + + D +MI G+ Q+G
Sbjct: 136 LFWEMP-RRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVG 190
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF++M+ V ++ T+++S A + + ++ + ++E T
Sbjct: 191 RLDEARELFDEMK----VRNVFTWTTMVSGYAKNGRVDVARK----LFEVMPERNEVSWT 242
Query: 188 ALISMYMKCGQPSWARRFFD----------------------------QFE-IKPDDPAF 218
A++ Y + G+ A F+ FE +K D
Sbjct: 243 AMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGT 302
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM- 277
WNAMI + R G A+ +F MQ+E V N S ++VLS C +D Q+ +
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLV 362
Query: 278 ----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
D D + ++ + + G L A+ + V +++S++ H
Sbjct: 363 RSEFDQDLYVA------SVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQH-- 414
Query: 334 SDLGEEMAMKLQEM-----EPENPTPFVILS 359
LGEE +M +P+ T +LS
Sbjct: 415 -GLGEEALNVFHDMCSSGVQPDEVTFIGVLS 444
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 35/235 (14%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+ IS Y + G AR+ FD + A WNAM+S Y + + A+ +FD M Q
Sbjct: 23 TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR- 81
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD------------------------FG 282
N+ SF ++S G V A ++F +M + F
Sbjct: 82 ---NTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 283 LKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS-DLGEE 339
P++ + M+ L + R+D+A++L +PE V V +++G +C + D E
Sbjct: 139 EMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGG-YCQVGRLDEARE 197
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
+ EM+ N + + + YA GR + ++ +++ +R + G T
Sbjct: 198 L---FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYT 249
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 218/416 (52%), Gaps = 37/416 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ AC+ + GR++HG K+ S +G LV MY KCG L A V
Sbjct: 138 PDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLV 197
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
E+ R++++WN+++ G N R + A+E+ + D T
Sbjct: 198 LDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTT 256
Query: 116 --------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
WN MI + + M EA +L+ +M++ G P +TSVL
Sbjct: 257 ENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC D SAL LGK+ HG++ R L + + ALI MY KCG AR F+ +K D
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN--MKSRD 374
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
W AMIS YG +G AV +F +Q + P+S +FV L+AC HAG +++ F
Sbjct: 375 VVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFK 434
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
+M D + + P+ EH CMVDLLGR+G++ EA I+++ EP V+ +LLGAC H ++
Sbjct: 435 LMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDT 494
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A KL ++ PE +V+LSNIYA GRWE+V IR ++ + L K PG S
Sbjct: 495 DIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP++V+ SV+ AC L G+++HG + + + ++ AL+DMY KCGCL A +
Sbjct: 306 EPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARD 365
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ +K SR++++W MI+ +GR A+ LF L G PD + + ++ S G
Sbjct: 366 VFENMK-SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Query: 128 MRFEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F+ M T + L C+ +L + KE + + + +E
Sbjct: 425 LLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV------KEAYRFIQDMSMEPNE 478
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ D+ F++ P+ ++ + + Y + G +E I ++M
Sbjct: 479 RVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIM 538
Query: 243 QQEKVKPN-SASFVAV 257
+ + +K N AS V V
Sbjct: 539 KSKGLKKNPGASNVEV 554
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH + + + ++ +G L+ Y + A VF E+ RN++ N MI +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP-ERNVIIINVMIRSYVN 117
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
NG F G E K+F M + P
Sbjct: 118 NG--------FYG---------------------------EGVKVFGTMCGCNVRPDHYT 142
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
VL AC+ + +G++ HG + L+ + L+SMY KCG S AR D E
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD--E 200
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
+ D WN+++ GY +N ++ A+E+ M+ K+ ++ + ++L A +
Sbjct: 201 MSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT 254
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 17/209 (8%)
Query: 128 MRFEAFKLFEKMQSTGMVPSLKC-----------VTSVLSACADLSALKLGKETHGHVIR 176
+ F F+ F+ + + +P L+ + VL D+ L+ H +I
Sbjct: 11 LHFPKFRKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRT---VHSRIIL 67
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
DL + S+ L+ Y + AR+ FD EI + N MI Y NG Y V
Sbjct: 68 EDLRCNSSLGVKLMRAYASLKDVASARKVFD--EIPERNVIIINVMIRSYVNNGFYGEGV 125
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
++F M V+P+ +F VL AC +G + +I GL +V +
Sbjct: 126 KVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA-TKVGLSSTLFVGNGLVSM 184
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLL 325
G+ G L EAR ++ E+ V ++SL+
Sbjct: 185 YGKCGFLSEARLVLDEMSRRDVVSWNSLV 213
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 225/383 (58%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++T+ ++ AC L G Q HG ++ SD + +LV MY G + A V
Sbjct: 111 PDNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYV 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + ++++W +M+AG + +G A +LF+ + + TW+ MISG+++
Sbjct: 171 FRRI-SCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNL----VTWSVMISGYAKNSF 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +L+ +QS G+ + + SV+++CA L AL+LG+ H +++R + + + TA
Sbjct: 226 FDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTA 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY +CG A FDQ + D W +I+G+ +G E A+E F M++ +
Sbjct: 286 LVDMYARCGSIDKAIWVFDQLPGR--DALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLT 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P +F AVLSAC H G V++ L++F M D+ ++P+ EH+GCMVDLLGR+G+L EA +
Sbjct: 344 PREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEK 403
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+P +P ++ +LLGAC H NS++ E L E++PE+ +V+LSNIYA +
Sbjct: 404 FVNEMPMKPNAPIWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNK 463
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE+V IRQM+ +R + K PG +
Sbjct: 464 WENVENIRQMMKERGVVKPPGYT 486
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 44/286 (15%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ +NS I GFS ++F + + + G+VP ++ AC +L +G +
Sbjct: 76 PNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQA 135
Query: 171 HGHVIRADLNKDESMATALISM-------------------------------YMKCGQP 199
HG +IR + D + +L++M Y+K G
Sbjct: 136 HGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDV 195
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ AR+ FD+ K + W+ MISGY +N ++ A+E++ L+Q E V N V+V++
Sbjct: 196 TSARKLFDKMPEK--NLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIA 253
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPE 315
+C H G ++ + D+ L+ K +VD+ R G +D+A + +LP
Sbjct: 254 SCAHLGALELGERA-----HDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPG 308
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ +L+ H ++ E ++++ + P T +LS
Sbjct: 309 RDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLS 354
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
+SGFS L +R K P L S L +C LS LK+ H H+IRA
Sbjct: 1 MSGFSNLVLRKLELK----------NPKL----SFLESCTTLSHLKI---IHAHLIRAHT 43
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D A+ LIS+ + +A + F ++I+ + +N+ I G+ + + + + +
Sbjct: 44 IFDVFAASCLISISINKNLLDYAAQVF--YQIQNPNLFIYNSFIRGFSGSKDPDKSFHFY 101
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
++ + P++ ++ ++ AC G +D +Q
Sbjct: 102 VQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQ 134
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 227/417 (54%), Gaps = 37/417 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T+ V+ AC+ L++G +HG LK+ + +G L+ MY KCGCL A
Sbjct: 116 RPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARR 175
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VF E+ +++++WN+M+AG N R + A+E+ + G KPD T
Sbjct: 176 VFDEMIW-KDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS 234
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN MI + + + +A L+ +M+ + P SV
Sbjct: 235 SENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASV 294
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC DLSAL LG+ H +V + L + + +LI MY +CG A+R FD+ + +
Sbjct: 295 LPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFR-- 352
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D A W ++IS YG G+ +AV +F M P+S +FVA+LSAC H+G +D+ F
Sbjct: 353 DVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYF 412
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M DD+ + P+ EH+ C+VDLLGR+GR+DEA +I+++P EP V+ +LL +C N
Sbjct: 413 KQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTN 472
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A L ++ PE +V+LSNIYA GRW++V IR ++ +++ K PGIS
Sbjct: 473 MDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGIS 529
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 151/356 (42%), Gaps = 60/356 (16%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
+++H + + + +G L+ Y CG VF E+ RN++ +N MI +
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEM-SDRNVVFYNVMIRSYVN 96
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
N R + + +F + + GF+PD T+
Sbjct: 97 NHRYDDGLLVFREMVNGGFRPDNYTY---------------------------------- 122
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
VL AC+ L+ G HG V++ L+ + + LI+MY KCG ARR FD+
Sbjct: 123 -PCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMI 181
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVD 268
K D WN+M++GY N ++ A+EI M+ KP+ + +++ A + +V
Sbjct: 182 WK--DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENVL 239
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSL 324
+IF ++ + + M+ + ++ +A +L ++ EP + S+
Sbjct: 240 YVEKIFVNLE-----RKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASV 294
Query: 325 LGACWCHLNSDLGE-EMAMKLQE-MEPENPTPFVILSN----IYAGLGRWEDVGRI 374
L AC DL + ++ E +E + P ++L N +YA G +D R+
Sbjct: 295 LPAC-----GDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRV 345
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+K K+ H + + +++ S+ L+ Y CG+P R+ FD E+ + F+N MI
Sbjct: 34 IKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD--EMSDRNVVFYNVMI 91
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI---FTMMDDD 280
Y N Y+ + +F M +P++ ++ VL AC + ++ L I + D
Sbjct: 92 RSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLD 151
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
F L ++ + G+ G L EAR + E+ V ++S++ ++ D E+
Sbjct: 152 FNLFVGNG----LIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEI 207
Query: 341 AMKLQEMEPENPTP 354
+EME P
Sbjct: 208 C---REMEDYGQKP 218
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 224/387 (57%), Gaps = 8/387 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P + V+S CA L L G+ +HG +K AL+ +Y K G + A +
Sbjct: 273 PTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKL 332
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL----AHEGFKPDPATWNSMISGFS 124
F E+K +N+++WN +I+ +G +KA+EL L A+ KP+ TW+++I GF+
Sbjct: 333 FHEMK-VKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFA 391
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ E+ ++F KMQ + + + SVLS CA L+AL LG+E HGHVIRA ++ +
Sbjct: 392 SKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVL 451
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ LI+MY KCG F++ E + D WN+MI+GYG +G + A+ F+ M +
Sbjct: 452 VGNGLINMYTKCGSFKPGFMVFEKLENR--DSISWNSMIAGYGTHGLGKDALATFNHMIK 509
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+P+ +F+A LSAC HAG V + +F+ M +F ++P+ EH+ CMVDLLGR+G ++
Sbjct: 510 SGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVE 569
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA +I+ +P EP ++ SLL +C H ++DL EE A K+ + + ++LSNI+A
Sbjct: 570 EASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFA 629
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
RWED R+R + L K+PG S
Sbjct: 630 ASCRWEDSARVRISARAKGLKKVPGWS 656
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 144/269 (53%), Gaps = 7/269 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF ++ A ++L + +H ++ Q+ +G L+ MY K + A VF ++
Sbjct: 141 TFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKM 200
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ +++++WNTM++G N A +F + EG +P+P TW S++S ++ G E
Sbjct: 201 R-IKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEET 259
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF KM+ G+ P+ + + VLS CADL+ L G+ HG++++ N ALI++
Sbjct: 260 MVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITL 319
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ----EKVK 248
Y K G A + F + ++K + WNA+IS + +G Y+ A+E+ +++ ++K
Sbjct: 320 YGKGGGVGDAEKLFHEMKVK--NLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMK 377
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMM 277
PN ++ A++ G +++L++F M
Sbjct: 378 PNVITWSAIICGFASKGLGEESLEVFRKM 406
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 145/377 (38%), Gaps = 73/377 (19%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
+Q +QVH T+ + LV +Y + G + A VF GS ++ +
Sbjct: 51 IQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVF----GSAPFECYSNFL- 105
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
WNS+I G EA +L+ KM++ G++
Sbjct: 106 ----------------------------LWNSIIRANVYHGYCIEALQLYGKMRNYGVLG 137
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+L A ++L A + K H HV++ + LI MY K + AR+ F
Sbjct: 138 DGFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVF 197
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D+ IK WN M+SGY N + A +F M+ E V+PN ++ ++LS+ GH
Sbjct: 198 DKMRIK--SVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTWTSLLSSHARCGH 255
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFG----------------------------------- 291
+++ + +F M G+ P E
Sbjct: 256 LEETMVLFCKMRMK-GVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAKN 314
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME--P 349
++ L G+ G + +A +L E+ + +++L+ + D E+ +L++ME P
Sbjct: 315 ALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYP 374
Query: 350 ENPTPFVILSNIYAGLG 366
E + S I G
Sbjct: 375 EMKPNVITWSAIICGFA 391
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--FEIKPDDPAFW 219
+ ++ K+ H + ++ L+S+Y + G S AR+ F FE + W
Sbjct: 49 NGIQHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPFECY-SNFLLW 107
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMM 277
N++I +G A++++ M+ V + +F +L A + G + K L +
Sbjct: 108 NSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNLHCHVV- 166
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
FG + ++ + + R+D+AR++ ++ +V +++++ + + +
Sbjct: 167 --QFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDVNGA 224
Query: 338 EEM--AMKLQEMEPENPTPFVILSNIYAGLGRWED 370
M M+L+ +EP NP + L + +A G E+
Sbjct: 225 SRMFHQMELEGVEP-NPVTWTSLLSSHARCGHLEE 258
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 230/387 (59%), Gaps = 14/387 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPCA 65
+ TF SV+SACA+ + G+ VHG ++++ ++ + ALV +Y K G + A
Sbjct: 299 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 358
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +++++WNT+++G + +G +KA+E+F+ + ++ + +W M+SG+
Sbjct: 359 KRIFDTMN-LKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYK----NDLSWMVMVSGYVH 413
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A KLF +M++ + P ++AC +L ALK G++ H H+++ S
Sbjct: 414 GGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSA 473
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL++MY KCG + AR F + P+ D WNAMIS G++G A+E+FD M
Sbjct: 474 GNALLTMYAKCGAVNDARLVF---LVMPNLDSVSWNAMISALGQHGHGREALELFDQMVA 530
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E + P+ SF+ +L+AC HAG VD+ F M DFG+ P ++H+ ++DLLGRSGR+
Sbjct: 531 EGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIG 590
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EAR+LI+ +P EPT S++ ++L C + + + G A +L M P++ +++LSN Y+
Sbjct: 591 EARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTYS 650
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D R+R+++ DR + K PG S
Sbjct: 651 AAGRWVDAARVRKLMRDRGVKKEPGCS 677
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 153/313 (48%), Gaps = 21/313 (6%)
Query: 6 SDEPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
S P+ +F ++ISA + L Q+H LK + + AL+ +Y+KC
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217
Query: 64 C---AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A V E+ ++ LTW TM+ G + G A +FE + +G K D WN+MI
Sbjct: 218 ASWDARKVLDEMP-DKDDLTWTTMVVGYVRRGDVNAARSVFEEV--DG-KFD-VVWNAMI 272
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG+ Q GM +AF+LF +M S + TSVLSACA+ GK HG +IR N
Sbjct: 273 SGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPN 332
Query: 181 KDESMA----TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
A AL+++Y K G+ A+R FD +K D WN ++SGY +G + AV
Sbjct: 333 FVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK--DVVSWNTILSGYIDSGCLDKAV 390
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
E+F +M + N S++ ++S H G + AL++F M + +KP + +
Sbjct: 391 EVFKVMPYK----NDLSWMVMVSGYVHGGLSEDALKLFNQMRAE-DVKPCDYTYAGAIAA 445
Query: 297 LGRSGRLDEAREL 309
G G L R+L
Sbjct: 446 CGELGALKHGRQL 458
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 120/277 (43%), Gaps = 47/277 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T+ I+AC L L+ GRQ+H ++ ++ G AL+ MY KCG + A
Sbjct: 433 KPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARL 492
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++ +WN MI+ + +G +A+ELF+ + EG PD ++ ++++ + G
Sbjct: 493 VFLVMPNLDSV-SWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAG 551
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F FE M+ G+ P E
Sbjct: 552 LVDEGFHYFESMKRDFGISPG-----------------------------------EDHY 576
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLM 242
LI + + G+ AR +P P+ W A++SG NG+ E +A ++F ++
Sbjct: 577 ARLIDLLGRSGRIGEARDLIKTMPFEP-TPSIWEAILSGCRTNGDMEFGAYAADQLFRMI 635
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q + +++ + + AG A ++ +M D
Sbjct: 636 PQ-----HDGTYILLSNTYSAAGRWVDAARVRKLMRD 667
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
T + R+D + AT+L++ + G+ A FFD D NAM+S + R
Sbjct: 81 TPAALFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARA 140
Query: 230 GEYESAVEIFD-LMQQEKVKPNSASFVAVLSACG 262
AV +F L+ ++P+ SF A++SA G
Sbjct: 141 SLAAPAVSVFHALLGSGSLRPDDYSFTALISAVG 174
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 223/384 (58%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T S++ ACA L +L+ G+++HG L+ + D IG +L+ +Y++C
Sbjct: 499 DPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQC-------- 550
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++M+ G ++ + E WN MI+GFSQ
Sbjct: 551 --------------SSMLLGKLIFDKMEN--------------KSLVCWNVMITGFSQNE 582
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA F +M S G+ P VT VL AC+ +SAL+LGKE H ++A L++D +
Sbjct: 583 LPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTC 642
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ++ FD+ + D A WN +I+GYG +G A+E+F+LMQ +
Sbjct: 643 ALIDMYAKCGCMEQSQNIFDR--VNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGG 700
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+S +F+ VL AC HAG V + L+ M + +G+KPK EH+ C+VD+LGR+G+L EA
Sbjct: 701 RPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEAL 760
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ E+P EP ++ SLL +C + + ++GEE++ KL E+EP +V+LSN+YAGLG
Sbjct: 761 KLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLG 820
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++RQ + + L K G S
Sbjct: 821 KWDEVRKVRQRMKENGLHKDAGCS 844
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 145/323 (44%), Gaps = 43/323 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V ACA + ++ G VH L LK SD +G AL+ MY KCG + A V
Sbjct: 193 PDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKV 252
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ +RN+++ WNS++ S+ G
Sbjct: 253 FETMR-NRNLVS-----------------------------------WNSVMYACSENGG 276
Query: 129 RFEAFKLFEKM---QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E +F+++ + G+VP + + +V+ ACA + +++G HG + + ++ ++
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ-Q 244
+L+ MY KCG AR FD K + WN +I GY + G++ E+ MQ +
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGK--NVVSWNTIIWGYSKEGDFRGVFELLQEMQRE 394
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
EKV+ N + + VL AC H +L+ G + V + LD
Sbjct: 395 EKVRVNEVTVLNVLPACS-GEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLD 453
Query: 305 EARELIRELPEPTVSVYHSLLGA 327
A + + TVS +++L+GA
Sbjct: 454 CAERVFCGMEGKTVSSWNALIGA 476
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 153/358 (42%), Gaps = 48/358 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N VT ++V+ AC+ L +++HG + D ++ A V Y KC L CA VF
Sbjct: 400 NEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVF 459
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++G ++WN++I +Q G
Sbjct: 460 CGMEG------------------------------------KTVSSWNALIGAHAQNGFP 483
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
++ LF M +GM P + S+L ACA L L+ GKE HG ++R L DE + +L
Sbjct: 484 GKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISL 543
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+S+Y++C + FD+ E K WN MI+G+ +N A++ F M +KP
Sbjct: 544 MSLYIQCSSMLLGKLIFDKMENKS--LVCWNVMITGFSQNELPCEALDTFRQMLSGGIKP 601
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP---KQEHFGC-MVDLLGRSGRLDE 305
+ VL AC + ++ + F LK + C ++D+ + G +++
Sbjct: 602 QEIAVTGVLGACSQVSALRLGKEVHS-----FALKAHLSEDAFVTCALIDMYAKCGCMEQ 656
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
++ + + E +V++ ++ H + E+ +L + + P F L + A
Sbjct: 657 SQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIEL-FELMQNKGGRPDSFTFLGVLIA 713
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 44/298 (14%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++ AC + GR+VH L K ++D ++ T ++ MY CG + VF K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAK-- 155
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+ D +N+++SG+S+ + +A L
Sbjct: 156 ----------------------------------EKDLFLYNALLSGYSRNALFRDAISL 181
Query: 136 F-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F E + +T + P + V ACA ++ ++LG+ H ++A D + ALI+MY
Sbjct: 182 FLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYG 241
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD---LMQQEKVKPNS 251
KCG A + F+ ++ + WN+++ NG + +F + ++E + P+
Sbjct: 242 KCGFVESAVKVFET--MRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDV 299
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
A+ V V+ AC G V + + + G+ + +VD+ + G L EAR L
Sbjct: 300 ATMVTVIPACAAVGEVRMGMVVHGLA-FKLGITEEVTVNNSLVDMYSKCGYLGEARAL 356
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 131 EAFKLFEKMQSTGMVPS----LKCVTSVLSACADLSALKLGKETHGHVIRA-DLNKDESM 185
+A L G V S + + +L AC + +G++ H V + L D +
Sbjct: 71 DALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVL 130
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQ 244
+T +I+MY CG PS +R FD K D +NA++SGY RN + A+ +F +L+
Sbjct: 131 STRIIAMYSACGSPSDSRGVFDA--AKEKDLFLYNALLSGYSRNALFRDAISLFLELLSA 188
Query: 245 EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRS 300
+ P++ + V AC V+ +A+ + F + F ++ + G+
Sbjct: 189 TDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGF-----SDAFVGNALIAMYGKC 243
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGAC 328
G ++ A ++ + + ++S++ AC
Sbjct: 244 GFVESAVKVFETMRNRNLVSWNSVMYAC 271
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 229/388 (59%), Gaps = 14/388 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPC 64
P+ TF S++SACA+ + G+ VHG ++++ ++ + ALV +Y K G +
Sbjct: 294 PDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAV 353
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + +++++WNT+++G + +G + A +F+ + ++ +W M+SG+
Sbjct: 354 ATKIFDSMT-LKDVVSWNTILSGYIESGCLDNAARIFKEMPYKS----ELSWMVMVSGYV 408
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ +A KLF +M+S + P ++AC +L ALK GK+ H H+++ S
Sbjct: 409 HGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNS 468
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AL++MY +CG AR F + P+ D WNAMIS G++G A+E+FD M
Sbjct: 469 AGNALLTMYARCGAVKDARLVF---LVMPNVDSVSWNAMISALGQHGHGREALELFDQMV 525
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ + P+ SF+ +L+AC HAG VD Q F M+ DFG+ P ++H+ ++DLLGR+GR+
Sbjct: 526 AQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRI 585
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EAR+LI+ +P EPT +++ ++L C + + +LG A +L +M PE+ +++LSN Y
Sbjct: 586 GEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNTY 645
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ GRW D R+R+++ DR + K PG S
Sbjct: 646 SAAGRWVDAARVRKLMRDRGVKKEPGCS 673
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 178/401 (44%), Gaps = 47/401 (11%)
Query: 6 SDEPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC---G 60
S P+ +F S++SA + L + Q+H K+ + + AL+ +Y+KC G
Sbjct: 154 SLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPG 213
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A V E+ ++ LTW T++ G + G A FE + E WN+MI
Sbjct: 214 VTRDARKVLDEMP-EKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEF----DVVWNAMI 268
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--AD 178
SG+ Q GM EAF+LF +M S + P TS+LSACA+ GK HG IR D
Sbjct: 269 SGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPD 328
Query: 179 LNKDESMAT--ALISMYMKCGQPSWARRFFDQFEIKP-----------------DDPA-- 217
+ ++ AL+++Y K G+ + A + FD +K D+ A
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARI 388
Query: 218 ----------FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
W M+SGY G E A+++F+ M+ E VKP ++ ++ACG G +
Sbjct: 389 FKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGAL 448
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
Q+ + G + ++ + R G + +AR + +P +++++ A
Sbjct: 449 KHGKQLHAHL-VQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISA 507
Query: 328 CWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGL 365
H + E+ M Q + P+ + IL+ +AGL
Sbjct: 508 LGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGL 548
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 41/274 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T+ ++AC L L+ G+Q+H ++ ++ G AL+ MY +CG + A
Sbjct: 429 KPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARL 488
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++ +WN MI+ + +G +A+ELF+ + +G PD ++ ++++ + G
Sbjct: 489 VFLVMPNVDSV-SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAG 547
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ + F+ FE M+ G+ P E
Sbjct: 548 LVDDGFQYFESMERDFGISPG-----------------------------------EDHY 572
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
LI + + G+ AR +P PA W A++SG NG+ E D Q K
Sbjct: 573 ARLIDLLGRAGRIGEARDLIKTMPFEP-TPAIWEAILSGCRINGDMELGAYAAD--QLFK 629
Query: 247 VKP-NSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ P + +++ + + AG A ++ +M D
Sbjct: 630 MVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRD 663
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD--LMQ 243
AT+L+S Y G+ + FFD + D NAMIS + R AV +F L
Sbjct: 92 ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151
Query: 244 QEKVKPNSASFVAVLSACG 262
+ ++P+ SF ++LSA G
Sbjct: 152 DDSLRPDDYSFTSLLSAVG 170
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 217/383 (56%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF SV+ ACASL+ L G Q+H LK+ S+ + AL+D+Y KCG
Sbjct: 305 PNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCG-------- 356
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E++ S + T G +EK + WN++I G+ QLG
Sbjct: 357 --EIENSVKLFT-----------GSTEK---------------NEVAWNTIIVGYVQLGD 388
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LF M + P+ +SVL A A L AL+ G++ H I+ NKD +A +
Sbjct: 389 GEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANS 448
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ AR FD+ + D WNA+I GY +G A+ +FD+MQQ K
Sbjct: 449 LIDMYAKCGRIDDARLTFDKMD--KQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSK 506
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV VLSAC +AG +DK F M D+G++P EH+ CMV LLGRSG+ DEA +
Sbjct: 507 PNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVK 566
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI E+P +P+V V+ +LLGAC H N DLG+ A ++ EMEP++ V+LSN+YA R
Sbjct: 567 LIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMYATAKR 626
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++V +R+ + +++ K PG+S
Sbjct: 627 WDNVAYVRKNMKKKKVKKEPGLS 649
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 157/352 (44%), Gaps = 51/352 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+ T + + +C L + G+ VHG LK+ D +G AL+++Y K G + A
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQ 261
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+E+ +++ W+ MI+ + +S++A+ELF
Sbjct: 262 FFEEMPKD-DLIPWSLMISRYAQSDKSKEALELF------------------------CR 296
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
MR QS+ +VP+ SVL ACA L L LG + H V++ L+ + ++
Sbjct: 297 MR----------QSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSN 346
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG+ + + F K + WN +I GY + G+ E A+ +F M +
Sbjct: 347 ALMDVYAKCGEIENSVKLFTGSTEK--NEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDI 404
Query: 248 KPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P ++ +VL A G +L I TM + D + ++D+ + GR
Sbjct: 405 QPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANS------LIDMYAKCGR 458
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+D+AR ++ + +++L+ H LG E M+ N P
Sbjct: 459 IDDARLTFDKMDKQDEVSWNALICGYSIH---GLGMEALNLFDMMQQSNSKP 507
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 40/319 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N F +++ S+ VH K+ Q+D +GTAL+D Y CG N
Sbjct: 101 EVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCG------N 154
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V + A ++F+G+ + D +W M++ +++
Sbjct: 155 V--------------------------DAARQVFDGI----YFKDMVSWTGMVACYAENY 184
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ LF +M+ G P+ +++ L +C L A K+GK HG ++ ++D +
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK- 246
AL+ +Y K G+ + A++FF+ E+ DD W+ MIS Y ++ + + A+E+F M+Q
Sbjct: 245 ALLELYTKSGEIAEAQQFFE--EMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN+ +F +VL AC ++ QI + + GL ++D+ + G ++ +
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCV-LKVGLDSNVFVSNALMDVYAKCGEIENS 361
Query: 307 RELIRELPEPTVSVYHSLL 325
+L E +++++
Sbjct: 362 VKLFTGSTEKNEVAWNTII 380
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 86/152 (56%), Gaps = 2/152 (1%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P VT+ SV+ A ASL+ L+ GRQ+H LT+K D+++ +L+DMY KCG +
Sbjct: 402 LDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDD 461
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F ++ ++ ++WN +I G ++G +A+ LF+ + KP+ T+ ++S S
Sbjct: 462 ARLTFDKMD-KQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACS 520
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVL 155
G+ + F+ M Q G+ P ++ T ++
Sbjct: 521 NAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMV 552
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 119/293 (40%), Gaps = 53/293 (18%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+ +H LK D L++ Y+ G L A +F E+ + N +++ T+ G
Sbjct: 22 GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLT-NTVSFVTLAQGFS 80
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+ + ++A L L EG++ + + +++ ++ S+
Sbjct: 81 RSHQFQRARRLLLRLFREGYEVNQFVFTTLLK----------------------LLVSMD 118
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
+ LS H +V + D + TALI Y CG AR+ FD
Sbjct: 119 LADTCLS-------------VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGI 165
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG--HAGHV 267
K D W M++ Y N +E ++ +F M+ +PN+ + A L +C A V
Sbjct: 166 YFK--DMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKV 223
Query: 268 DK-----ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
K AL++ D G+ +++L +SG + EA++ E+P+
Sbjct: 224 GKSVHGCALKVCYDRDLYVGIA--------LLELYTKSGEIAEAQQFFEEMPK 268
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 225/383 (58%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT SV+ + L GR +HG +K D + +A++DMY K G + ++
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + + + N I G+ NG +KA+E+FE + + + +W S+I+G +Q G
Sbjct: 310 FNQFEMMEAGVC-NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +MQ G+ P+ + S+L AC +++AL G+ THG +R L + + +A
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ + ++ F+ K + WN++++G+ +G+ + + IF+ + + ++K
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF ++LSACG G D+ + F MM +++G+KP+ EH+ CMV+LLGR+G+L EA +
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+E+P EP V+ +LL +C N DL E A KL +EPENP +V+LSNIYA G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V IR + L K PG S
Sbjct: 607 WTEVDSIRNKMESLGLKKNPGCS 629
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 151/299 (50%), Gaps = 4/299 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S ++ CA L + G+Q+H ++ D + ++ MY++CG + A V
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++T + ++ G E+ + + + G + + +WN ++SGF++ G
Sbjct: 174 FDRM-SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F+K+ G P V+SVL + D L +G+ HG+VI+ L KD+ + +A
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY K G F+QFE+ + NA I+G RNG + A+E+F+L +++ ++
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMM--EAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
N S+ ++++ C G +AL++F M G+KP M+ G L R
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGR 408
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 125/248 (50%), Gaps = 12/248 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT S++ AC ++ L GR HG +++ + +G+AL+DMY KCG + +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++N++ WN+++ G ++G++++ M +FE L KPD ++ S++S Q+G
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F+ M + G+ P L+ C+ ++L L +E + + D
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL------QEAYDLIKEMPFEPDS 557
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ A ++ F ++P++P + + + Y G + I + M
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 243 QQEKVKPN 250
+ +K N
Sbjct: 618 ESLGLKKN 625
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 111 PDPA--TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
PDP +++S+I ++ + ++ +F +M S G++P + ++ CA+LSA K+GK
Sbjct: 77 PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+ H + L+ D + ++ MYM+CG+ AR+ FD+ K D +A++ Y R
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK--DVVTCSALLCAYAR 194
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G E V I M+ ++ N S+ +LS +G+ +A+ +F + G P Q
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQV 253
Query: 289 HFGCMVDLLGRSGRLDEAR 307
++ +G S L+ R
Sbjct: 254 TVSSVLPSVGDSEMLNMGR 272
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 220/392 (56%), Gaps = 43/392 (10%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+++C+ +PN+VT SV+ ACAS+ L G+++HG L+ + + +AL+DMY KCG
Sbjct: 436 LEQCI--KPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCG 493
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L +H +F ++ D TWNSMI
Sbjct: 494 RLDLSHYIFSKMS------------------------------------LKDEVTWNSMI 517
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
S FSQ G EA LF +M G+ + ++S LSACA L A+ GKE HG +I+ +
Sbjct: 518 SSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIK 577
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF 239
D +ALI MY KCG A R F E PD + WN++IS YG +G + +V
Sbjct: 578 ADIFAESALIDMYAKCGNMELALRVF---EFMPDKNEVSWNSIISAYGAHGLVKESVSFL 634
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+E KP+ +F+A++SAC HAG V++ LQ+F M ++ + P+ EHF CMVDL R
Sbjct: 635 HRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSR 694
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
SGRLD+A + I ++P +P ++ +LL AC H N +L + + +L +++P N +V++
Sbjct: 695 SGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGYYVLM 754
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SNI A GRW+ V ++R+++ D ++ K+PG S
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 141/307 (45%), Gaps = 41/307 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T +S CA+ L G Q+H L +K + + + L+ MY KC CL
Sbjct: 239 EPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCL----- 293
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A LFE L + D TWN MISG Q G
Sbjct: 294 ---------------------------DDAWRLFELLPRD----DLVTWNGMISGCVQNG 322
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF M +G P + S+L A DL+ LK GKE HG++IR ++ D + +
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KC AR +D + D + +ISGY NG E A+++F + ++ +
Sbjct: 383 ALVDIYFKCRDVRTARNLYDA--ARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCI 440
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPN+ + +VL AC + +I ++ + + K E ++D+ + GRLD +
Sbjct: 441 KPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVE--SALMDMYAKCGRLDLS 498
Query: 307 RELIREL 313
+ ++
Sbjct: 499 HYIFSKM 505
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 40/254 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T V+ +CA+L + GR VH SD +G+AL+ MY G L A +
Sbjct: 138 SPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARD 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + W D WN M+ G+ + G
Sbjct: 198 AFDGMP-------WR-----------------------------DCVLWNVMMDGYIKAG 221
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF M+ +G P+ + LS CA + L G + H ++ L ++ ++A
Sbjct: 222 DVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQEVAVAN 281
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L+SMY KC A R FE+ P DD WN MISG +NG + A+ +F M +
Sbjct: 282 TLLSMYAKCRCLDDAWRL---FELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSG 338
Query: 247 VKPNSASFVAVLSA 260
+P+S + V++L A
Sbjct: 339 ARPDSVTLVSLLPA 352
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 130/329 (39%), Gaps = 37/329 (11%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E ++D ++ ++++ C S +L G Q+H
Sbjct: 24 EVVTDVSSADRLLALLRGCVSAPHLPLGLQIH---------------------------- 55
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGM-MLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A V + N L +T + GM +L R A+ +F L WN +I
Sbjct: 56 --ARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSALPRAA-AGSSLPWNWLIR 112
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADL 179
GF+ G A + KM + PS T V+ +CA L A+ LG+ H L
Sbjct: 113 GFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGL 172
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +ALI MY G AR FD + D WN M+ GY + G+ AV +F
Sbjct: 173 ASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR--DCVLWNVMMDGYIKAGDVGGAVRLF 230
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M+ +PN A+ LS C + +Q+ ++ GL+ + ++ + +
Sbjct: 231 RNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLA-VKCGLEQEVAVANTLLSMYAK 289
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGAC 328
LD+A L LP + ++ ++ C
Sbjct: 290 CRCLDDAWRLFELLPRDDLVTWNGMISGC 318
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 225/383 (58%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT SV+ + L GR +HG +K D + +A++DMY K G + ++
Sbjct: 250 PDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISL 309
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + + + N I G+ NG +KA+E+FE + + + +W S+I+G +Q G
Sbjct: 310 FNQFEMMEAGVC-NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGK 368
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +MQ G+ P+ + S+L AC +++AL G+ THG +R L + + +A
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ + ++ F+ K + WN++++G+ +G+ + + IF+ + + ++K
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTK--NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLK 486
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF ++LSACG G D+ + F MM +++G+KP+ EH+ CMV+LLGR+G+L EA +
Sbjct: 487 PDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYD 546
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+E+P EP V+ +LL +C N DL E A KL +EPENP +V+LSNIYA G
Sbjct: 547 LIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGM 606
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V IR + L K PG S
Sbjct: 607 WTEVDSIRNKMESLGLKKNPGCS 629
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 151/299 (50%), Gaps = 4/299 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S ++ CA L + G+Q+H ++ D + ++ MY++CG + A V
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++T + ++ G E+ + + + G + + +WN ++SGF++ G
Sbjct: 174 FDRMS-DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F+K+ G P V+SVL + D L +G+ HG+VI+ L KD+ + +A
Sbjct: 233 HKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISA 292
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY K G F+QFE+ + NA I+G RNG + A+E+F+L +++ ++
Sbjct: 293 MIDMYGKSGHVYGIISLFNQFEMM--EAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
N S+ ++++ C G +AL++F M G+KP M+ G L R
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGR 408
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 125/248 (50%), Gaps = 12/248 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT S++ AC ++ L GR HG +++ + +G+AL+DMY KCG + +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++N++ WN+++ G ++G++++ M +FE L KPD ++ S++S Q+G
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVG 503
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F+ M + G+ P L+ C+ ++L L +E + + D
Sbjct: 504 LTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL------QEAYDLIKEMPFEPDS 557
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ A ++ F ++P++P + + + Y G + I + M
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKM 617
Query: 243 QQEKVKPN 250
+ +K N
Sbjct: 618 ESLGLKKN 625
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 111 PDPA--TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
PDP +++S+I ++ + ++ +F +M S G++P + ++ CA+LSA K+GK
Sbjct: 77 PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+ H + L+ D + ++ MYM+CG+ AR+ FD+ K D +A++ Y R
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK--DVVTCSALLCAYAR 194
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G E V I M+ ++ N S+ +LS +G+ +A+ +F + G P Q
Sbjct: 195 KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI-HHLGFCPDQV 253
Query: 289 HFGCMVDLLGRSGRLDEAR 307
++ +G S L+ R
Sbjct: 254 TVSSVLPSVGDSEMLNMGR 272
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 214/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+V SV+ ACAS+ ++ G+++H LK + + +AL+DMY KCG L +H
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ D TWNSMIS F+Q G
Sbjct: 506 IFSKISAK------------------------------------DEVTWNSMISSFAQNG 529
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G+ S ++SVLSACA L A+ GKE HG VI+ + D +
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAES 589
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG WA R F+ K + WN++I+ YG G + +V + MQ+E
Sbjct: 590 ALIDMYGKCGNLEWAHRVFESMPEK--NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGF 647
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +F+A++SAC HAG V + L++F M +++ + P+ EHF CMVDL R+G+LD+A
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI ++P +P ++ +LL AC H N +L E + +L +++P N +V++SNI A G
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V ++R+++ D ++ K+PG S
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYS 791
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 39/320 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SVT +S++ A L G+++HG ++ D + +ALVD+Y KC + A +
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V+ K + +++ +TMI+G +LNG S++A+++F L +G +P+
Sbjct: 405 VYDSSK-AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVA------------ 451
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL ACA ++A+KLG+E H + ++ + +
Sbjct: 452 -----------------------IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ + F + K D WN+MIS + +NGE E A+ +F M E V
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAK--DEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K ++ + +VLSAC + +I ++ ++ ++D+ G+ G L+ A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAH 605
Query: 308 ELIRELPEPTVSVYHSLLGA 327
+ +PE ++S++ +
Sbjct: 606 RVFESMPEKNEVSWNSIIAS 625
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 47/324 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T +S A+ L FG Q+H L +K +S+ + LV MY KC CL
Sbjct: 244 EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWK 303
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F G+M + D TWN MISG Q G
Sbjct: 304 LF-----------------GLMP-------------------RDDLVTWNGMISGCVQNG 327
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF MQ +G+ P + S+L A DL+ GKE HG+++R ++ D + +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KC A+ +D K D + MISGY NG + AV++F + ++ +
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSS--KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRL 303
+PN+ + +VL AC + ++ + + LK E ++D+ + GRL
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHS-----YALKNAYEGRCYVESALMDMYAKCGRL 500
Query: 304 DEARELIRELPEPTVSVYHSLLGA 327
D + + ++ ++S++ +
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISS 524
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 44/255 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF V+ +CA+L + GR VH + D +G+AL+ MY G
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG-------- 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
L W+ A ++F+G+A D WN M+ G+ + G
Sbjct: 196 ----------LLWD--------------ARQVFDGMAER----DCVLWNVMMDGYVKAGS 227
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF M+++G P+ + LS A S L G + H ++ L + ++A
Sbjct: 228 VSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 189 LISMYMKCG--QPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
L+SMY KC W F + P DD WN MISG +NG + A+ +F MQ+
Sbjct: 288 LVSMYAKCKCLDDGW-----KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 246 KVKPNSASFVAVLSA 260
++P+S + V++L A
Sbjct: 343 GIRPDSVTLVSLLPA 357
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 127/318 (39%), Gaps = 39/318 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++V+ C S +L G QVHG + +DT + T LV MY+
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYV--------------- 86
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
L R A+ +F L G WN +I G + G A
Sbjct: 87 -----------------LARRFRDAVAVFSSLP-RGAAACALPWNWLIRGLTMAGDYRSA 128
Query: 133 FKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ KM + +P V+ +CA L A+ LG+ H L+ D + +ALI
Sbjct: 129 LLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALI 188
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY G AR+ FD + D WN M+ GY + G SAVE+F M+ +PN
Sbjct: 189 KMYANGGLLWDARQVFDGMAER--DCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
A+ LS + +Q+ T+ +GL+ + +V + + LD+ +L
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLA-VKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305
Query: 311 RELPEPTVSVYHSLLGAC 328
+P + ++ ++ C
Sbjct: 306 GLMPRDDLVTWNGMISGC 323
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 220/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT + ++SAC+ L L+ G+ ++ + + ++ L+DM+ CG + A +V
Sbjct: 206 PNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQSV 265
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K +R++++W +++ G G+ + A + F+ + D +W +MI G+ ++
Sbjct: 266 FDNMK-NRDVISWTSIVTGFANIGQIDLARKYFDQIPER----DYVSWTAMIDGYLRMNR 320
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ + + P + S+L+ACA L AL+LG+ ++ + + D + A
Sbjct: 321 FIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNA 380
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A++ F E+ D W AMI G NG E A+ +F M + +
Sbjct: 381 LIDMYFKCGNVGKAKKVFK--EMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASIT 438
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ VL AC HAG V+K F M G+KP H+GCMVDLLGR+GRL+EA E
Sbjct: 439 PDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHE 498
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P +P V+ SLLGAC H N L E A ++ E+EPEN +V+L NIYA R
Sbjct: 499 VIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKR 558
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE++ ++R+++ +R + K PG S
Sbjct: 559 WENLRQVRKLMMERGIKKTPGCS 581
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 141/337 (41%), Gaps = 70/337 (20%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF ++ + LQ+G+ + +K S+ + A + M+ C + A
Sbjct: 104 KPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARK 163
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF G + TWN M+SG++++
Sbjct: 164 VFDM------------------------------------GDAWEVVTWNIMLSGYNRVK 187
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ LF +M+ G+ P+ + +LSAC+ L L+ GK + ++ + ++ +
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247
Query: 188 ALISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDP 216
LI M+ CG+ SW AR++FDQ I D
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQ--IPERDY 305
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY R + A+ +F MQ VKP+ + V++L+AC H G ++ + T
Sbjct: 306 VSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTY 365
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+D + +K ++D+ + G + +A+++ +E+
Sbjct: 366 IDKN-SIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +S+++ACA L L+ G V K ++DT +G AL+DMY KCG + A
Sbjct: 337 KPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKK 396
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ ++ TW MI G+ +NG E+A+ +F + PD T+ ++ + G
Sbjct: 397 VFKEMH-HKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAG 455
Query: 128 M--RFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
M + ++F + MQ G+ P++ C+ +L L +E H ++ + +
Sbjct: 456 MVEKGQSFFISMTMQH-GIKPNVTHYGCMVDLLGRAGRL------EEAHEVIVNMPVKPN 508
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+ A Q E++P++ A + + + Y +E+ ++ L
Sbjct: 509 SIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKL 568
Query: 242 MQQEKVK 248
M + +K
Sbjct: 569 MMERGIK 575
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 136/326 (41%), Gaps = 47/326 (14%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ C + P IS++ C S+ L +Q+H T+K+ SD + ++
Sbjct: 2 ISHCFGESP-----ISLLEKCKSMYQL---KQIHSHTIKMGLSSDPLFQKRVI------- 46
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
CAH +G M+ R ++F+ + +P WN+MI
Sbjct: 47 AFCCAHE------------------SGKMIYAR-----QVFDAIP----QPTLFIWNTMI 79
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+S++ ++ M ++ + P +L AL+ GK H ++ +
Sbjct: 80 KGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + A I M+ C AR+ FD + + WN M+SGY R +++ + +F
Sbjct: 140 SNLFVQKAFIHMFSLCRLVDLARKVFDMGD--AWEVVTWNIMLSGYNRVKQFKKSKMLFI 197
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-GCMVDLLGR 299
M++ V PNS + V +LSAC ++ I+ ++ G+ + ++D+
Sbjct: 198 EMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYING--GIVERNLILENVLIDMFAA 255
Query: 300 SGRLDEARELIRELPEPTVSVYHSLL 325
G +DEA+ + + V + S++
Sbjct: 256 CGEMDEAQSVFDNMKNRDVISWTSIV 281
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 155/384 (40%), Positives = 221/384 (57%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F + SACASL Q GR +H +K D TALVDMY K G L A
Sbjct: 80 PNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQ 139
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R++ TWN+MIAG G E A+ELF + + +W +MISG++Q G
Sbjct: 140 FDEMT-VRDVPTWNSMIAGYARCGDLEGALELFRLMP----ARNVTSWTAMISGYAQNGQ 194
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +F M+ T M P+ + SVL ACA+L AL++G+ + K+ ++
Sbjct: 195 YAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSN 254
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY +CG+ A F++ + + + + WN+MI G +G + A+E+F M +E
Sbjct: 255 ALLEMYARCGRIDKAWGVFEEIDGRRNLCS-WNSMIMGLAVHGRCDEAIELFYKMLREGA 313
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +FV VL AC H G V + F M+ DF + PK EH+GCMVDLLGR+G L EA
Sbjct: 314 APDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAH 373
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P EP V+ +LLGAC H + +L E+ A L E+EP NP +VILSNIYA G
Sbjct: 374 DLILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAG 433
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V R+R+++ ++TK G S
Sbjct: 434 RWDGVARLRKLMKGGKITKAAGYS 457
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 28/295 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E PN VT SV+ ACA+L L+ G ++ + + AL++MY +CG
Sbjct: 205 MEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCG 264
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF+E+ G RN+ +WN+MI G+ ++GR ++A+ELF + EG PD T+ ++
Sbjct: 265 RIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVL 324
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIR 176
+ GM E FE M+ + P L+ C+ +L +L +E H ++R
Sbjct: 325 LACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGEL------REAHDLILR 378
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D + L+ G A + FE++P +P + + + Y G ++
Sbjct: 379 MPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGV 438
Query: 236 VEIFDLMQQEKV-KPNSASFVAVLSACGHAGHVDKAL----------QIFTMMDD 279
+ LM+ K+ K SF+ GH+ K + +I+ ++D+
Sbjct: 439 ARLRKLMKGGKITKAAGYSFIE------EGGHIHKFIVEDRSHSRSDEIYALLDE 487
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 6/178 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP +N +I +S G + F L+ +M G P+ T + SACA LS+ + G+
Sbjct: 44 KPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACASLSSHQQGRM 103
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H H +++ D TAL+ MY K G S AR+ FD+ ++ D WN+MI+GY R
Sbjct: 104 LHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVR--DVPTWNSMIAGYARC 161
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
G+ E A+E+F LM N S+ A++S G KAL +F MM+++ ++P +
Sbjct: 162 GDLEGALELFRLMPAR----NVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPNE 215
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/430 (35%), Positives = 240/430 (55%), Gaps = 53/430 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF ++++ CA+ GRQ+H ++ + ++ T LV MY +CG L A
Sbjct: 275 QPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKE 334
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF---- 123
+F + RN +WN+MI G NG +++A+ LF+ + G KPD + +SM+S
Sbjct: 335 IFNRM-AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 393
Query: 124 -SQLGMRFEAFKLFEKMQSTGMVPSL------KCVT----------------------SV 154
SQ G F + M+ G++ + KC + S+
Sbjct: 394 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSI 453
Query: 155 LSACADLSALKLGKETHGH---VIRADLNKDE----------SMATALISMYMKCGQPSW 201
L+ A+ L KE+ H ++ +D+ D + TAL+ MY KCG +
Sbjct: 454 LAGYANKG---LKKESFNHFLEMLESDIEYDVLTMVTIVNLLVLETALVDMYSKCGAITK 510
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
AR FD K + WNAMISGY ++G + A+ +++ M ++ + PN +F+A+LSAC
Sbjct: 511 ARTVFDNMNGK--NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSAC 568
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSV 320
H G V++ L+IFT M +D+ ++ K EH+ CMVDLLGR+GRL++A+E + ++P EP VS
Sbjct: 569 SHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVST 628
Query: 321 YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIND 380
+ +LLGAC H + D+G A +L E++P+NP P+VI+SNIYA GRW++V IRQM+
Sbjct: 629 WGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKM 688
Query: 381 RQLTKLPGIS 390
+ + K PG+S
Sbjct: 689 KGVKKDPGVS 698
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 145/304 (47%), Gaps = 49/304 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF S + C +L G+QVH + + DT +G AL+DMY KC V
Sbjct: 173 PDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKV 232
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL--AHEGFKPDPATWNSMISGFSQL 126
F E+ G RN +TWN++I+ G A+ LF + + +G +PD T+
Sbjct: 233 FDEM-GERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTF---------- 281
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
T++L+ CA+ G++ H H+IRA++ K+ +
Sbjct: 282 -------------------------TTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVE 316
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+ MY +CG+ ++A+ F++ + + WN+MI GY +NGE + A+ +F MQ
Sbjct: 317 TELVHMYSECGRLNYAKEIFNR--MAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 374
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG----CMVDLLGRSGR 302
+KP+ S ++LS+C K ++ +F ++ E G +VD+ + G
Sbjct: 375 IKPDCFSLSSMLSSCVSLSDSQKGREL-----HNFIVRNTMEEEGILQVVLVDMYAKCGS 429
Query: 303 LDEA 306
+D A
Sbjct: 430 MDYA 433
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 50/328 (15%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP-- 63
+ + N + + S+I C Q G+ +H + D + T ++ +Y + GCL
Sbjct: 66 ASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDL 125
Query: 64 -CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F+E+ RN+ WNTMI
Sbjct: 126 CYARKLFEEMP-ERNLTAWNTMIL-----------------------------------A 149
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++++ EA+ +F++M G+ P S L C L + GK+ H +I D
Sbjct: 150 YARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 209
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ ALI MY KC + FD E+ + WN++IS + G + A+ +F M
Sbjct: 210 TFVGNALIDMYAKCDDEESCLKVFD--EMGERNQVTWNSIISAEAQFGHFNDALVLFLRM 267
Query: 243 QQEK--VKPNSASFVAVLSACGHAGHVDKALQIFTMM---DDDFGLKPKQEHFGCMVDLL 297
Q+ + ++P+ +F +L+ C + + ++ QI + + + + E +V +
Sbjct: 268 QESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETE----LVHMY 323
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLL 325
GRL+ A+E+ + E ++S++
Sbjct: 324 SECGRLNYAKEIFNRMAERNAYSWNSMI 351
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG---QPSWARRFFDQ 208
+S++ C D ++ + GK H +I N D + T ++ +Y + G +AR+ F+
Sbjct: 75 SSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE- 133
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
E+ + WN MI Y R +Y A IFD M + V P++ +F + L CG D
Sbjct: 134 -EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 192
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG-- 326
Q+ + + G K ++D+ + + ++ E+ E ++S++
Sbjct: 193 GGKQVHSKL-IACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 251
Query: 327 ACWCHLNSDLGEEMAMKLQEME 348
A + H N L + +++QE E
Sbjct: 252 AQFGHFNDAL--VLFLRMQESE 271
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 215/385 (55%), Gaps = 9/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +F V+ ACA L L GR++H TLK+ D + AL+ + CG + A V
Sbjct: 8 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 69 FQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F L R++++WN+MI+G + + R E A+++F+ + H + W SMI+G++Q
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHR----NTVCWTSMIAGYAQSD 123
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LF +MQ G + VLSAC AL G+ H + R + D +
Sbjct: 124 LFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARN 183
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
ALI MY KCG A F +PD + W+A+ISG NGE + A+ +F M+
Sbjct: 184 ALIGMYSKCGDIQKALEIFHGLT-QPDIFS-WSAVISGLAMNGESDKALHLFSQMEMISD 241
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++PN +F+ VL AC H G VDK L F M + L P EH+GCMVDLLGR+ L EA
Sbjct: 242 IRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEA 301
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ IR LP +P V ++ SLL AC H N +L E A +++E+EP V+LSN+YA
Sbjct: 302 EKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASA 361
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RW DV R+R+ + +++ K PG S
Sbjct: 362 SRWGDVKRVRKDMATQRIKKQPGCS 386
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 32/251 (12%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G +P VL ACA LS L G+E H ++ ++ D + ALIS + CG
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL----------------- 241
AR FD D WN+MISGY ++ YE A+++FD
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 242 --------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
MQ ++A+ VLSACGH G + + I + + ++
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERN-SIEMDL 179
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
++ + + G + +A E+ L +P + + +++ + SD + +++ +
Sbjct: 180 NARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMI 239
Query: 348 EPENPTPFVIL 358
P L
Sbjct: 240 SDIRPNEITFL 250
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 228/394 (57%), Gaps = 15/394 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLP 63
L +P+ VT SV+SACA+L + G Q+H +K +K ++D ++G ALVDMY KCG +
Sbjct: 251 LGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVN 310
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF + RN ++ TM++G + + A +F + + D +WN++I+G+
Sbjct: 311 EARCVFDRMP-VRNAVSETTMVSGYAKSASVKAARSMFATIKQK----DIVSWNALIAGY 365
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN--- 180
+Q G EA LF ++ + P+ ++L+A A+L+ L+LG++ H HV++
Sbjct: 366 TQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQS 425
Query: 181 ---KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D + +LI MYMKCG R F+ K D WN MI GY +NG A+E
Sbjct: 426 GEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEK--DHVSWNTMIIGYAQNGYGMEALE 483
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F M + KP+ + + L AC HAG V++ + F M + GL P ++H+ CMVDLL
Sbjct: 484 LFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLL 543
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+G L+EA++LI +P +P V+ SLL AC H N LG+ +A K+ E++P + P+V
Sbjct: 544 GRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYV 603
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L+N+Y+ LGRW D +R+++ R + K PG S
Sbjct: 604 LLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCS 637
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 149/305 (48%), Gaps = 7/305 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F ++ C L + R VHG ++ + I L+D+Y KCG L A VF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RN+ ++N++I+ +M G +++ LF + + D +WNSMI+GF+Q
Sbjct: 83 DRM-SERNVFSFNSIISTLMRWGFVDESAWLFSLMPEK----DQCSWNSMIAGFAQHDRF 137
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F +M V + S LSAC+ L LKLG + HG + ++ + D M + L
Sbjct: 138 EEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGL 197
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I Y KCG ARR FD E K + WN +I+ Y +NG A+E F M + KP
Sbjct: 198 IDFYSKCGLVGCARRVFDGMEEK--NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKP 255
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V+SAC + +QI + + +VD+ + GR++EAR +
Sbjct: 256 DEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCV 315
Query: 310 IRELP 314
+P
Sbjct: 316 FDRMP 320
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 214/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+V SV+ ACAS+ ++ G+++H LK + + +AL+DMY KCG L +H
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHY 505
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ D TWNSMIS F+Q G
Sbjct: 506 IFSKISAK------------------------------------DEVTWNSMISSFAQNG 529
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G+ S ++SVLSACA L A+ GKE HG VI+ + D +
Sbjct: 530 EPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAES 589
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG WA R F+ K + WN++I+ YG G + +V + MQ+E
Sbjct: 590 ALIDMYGKCGNLEWAHRVFESMPEK--NEVSWNSIIASYGAYGLVKESVSLLRHMQEEGF 647
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +F+A++SAC HAG V + L++F M +++ + P+ EHF CMVDL R+G+LD+A
Sbjct: 648 KADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAM 707
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI ++P +P ++ +LL AC H N +L E + +L +++P N +V++SNI A G
Sbjct: 708 ELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAG 767
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V ++R+++ D ++ K+PG S
Sbjct: 768 RWDGVSKVRRLMKDTKVQKIPGYS 791
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 156/320 (48%), Gaps = 39/320 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SVT +S++ A L G+++HG ++ D + +ALVD+Y KC + A +
Sbjct: 345 RPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQS 404
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V+ K + +++ +TMI+G +LNG S++A+++F L +G +P+
Sbjct: 405 VYDSSK-AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVA------------ 451
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL ACA ++A+KLG+E H + ++ + +
Sbjct: 452 -----------------------IASVLPACASMAAMKLGQELHSYALKNAYEGRCYVES 488
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ + F + K D WN+MIS + +NGE E A+ +F M E V
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAK--DEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K ++ + +VLSAC + +I ++ ++ ++D+ G+ G L+ A
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAH 605
Query: 308 ELIRELPEPTVSVYHSLLGA 327
+ +PE ++S++ +
Sbjct: 606 RVFESMPEKNEVSWNSIIAS 625
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 47/324 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T +S A+ L FG Q+H L +K +S+ + LV MY KC CL
Sbjct: 244 EPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWK 303
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F G+M + D TWN MISG Q G
Sbjct: 304 LF-----------------GLMP-------------------RDDLVTWNGMISGCVQNG 327
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF MQ +G+ P + S+L A DL+ GKE HG+++R ++ D + +
Sbjct: 328 FVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVS 387
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KC A+ +D K D + MISGY NG + AV++F + ++ +
Sbjct: 388 ALVDIYFKCRAVRMAQSVYDSS--KAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGI 445
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRL 303
+PN+ + +VL AC + ++ + + LK E ++D+ + GRL
Sbjct: 446 RPNAVAIASVLPACASMAAMKLGQELHS-----YALKNAYEGRCYVESALMDMYAKCGRL 500
Query: 304 DEARELIRELPEPTVSVYHSLLGA 327
D + + ++ ++S++ +
Sbjct: 501 DLSHYIFSKISAKDEVTWNSMISS 524
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 116/255 (45%), Gaps = 44/255 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF V+ +CA+L + GR VH + D +G+AL+ MY G
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGG-------- 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
L W+ A ++F+G+A D WN M+ G+ + G
Sbjct: 196 ----------LLWD--------------ARQVFDGMAER----DCVLWNVMMDGYVKAGS 227
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF M+++G P+ + LS A S L G + H ++ L + ++A
Sbjct: 228 VSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 189 LISMYMKCG--QPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
L+SMY KC W F + P DD WN MISG +NG + A+ +F MQ+
Sbjct: 288 LVSMYAKCKCLDDGW-----KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKS 342
Query: 246 KVKPNSASFVAVLSA 260
++P+S + V++L A
Sbjct: 343 GIRPDSVTLVSLLPA 357
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 127/318 (39%), Gaps = 39/318 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++V+ C S +L G QVHG + +DT + T LV MY+
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYV--------------- 86
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
L R A+ +F L G WN +I G + G A
Sbjct: 87 -----------------LARRFRDAVAVFSSLP-RGAAACALPWNWLIRGLTMAGDYRSA 128
Query: 133 FKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ KM + +P V+ +CA L A+ LG+ H L+ D + +ALI
Sbjct: 129 LLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALI 188
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY G AR+ FD + D WN M+ GY + G SAVE+F M+ +PN
Sbjct: 189 KMYANGGLLWDARQVFDGMAER--DCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPN 246
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
A+ LS + +Q+ T+ +GL+ + +V + + LD+ +L
Sbjct: 247 FATLACFLSVSATESDLFFGVQLHTLA-VKYGLESEVAVANTLVSMYAKCKCLDDGWKLF 305
Query: 311 RELPEPTVSVYHSLLGAC 328
+P + ++ ++ C
Sbjct: 306 GLMPRDDLVTWNGMISGC 323
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 224/385 (58%), Gaps = 12/385 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ TF SV+ +C+ L+ G+ +H +K+ SD + T LVD+Y + G + CA
Sbjct: 142 EPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQ 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R++++ TM+ G +KA LFEG+ + D WN MI G++Q G
Sbjct: 198 LFDKMP-ERSLVSLTTMLTCYSKMGELDKARSLFEGMK----ERDVVCWNVMIGGYAQSG 252
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E+ KLF +M +P+ V +VLSAC L AL+ G+ H ++ + + + T
Sbjct: 253 VPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGT 312
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FD+ I+ D WN+MI GY +G + A+++F+ M +
Sbjct: 313 ALIDMYSKCGSLEDARLVFDR--IRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGH 370
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP +F+ +LSACGH G V++ F +M D +G++PK EH+GCMV+LLGR+G L+EA
Sbjct: 371 KPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAY 430
Query: 308 ELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L++ + V + +LLG C H+N LGEE+A L + + N +V+LSN+YA G
Sbjct: 431 GLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATG 490
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
WE V ++R ++ + + K G S+
Sbjct: 491 NWEGVAKMRTLMKEHGIEKEHGCSS 515
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P+ +++++I Q + AF + +M S G+ P+ +SVL +C +L+ GK
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKV 162
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H I+ L D + T L+ +Y + G AR+ FD+
Sbjct: 163 LHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGE 222
Query: 209 -------FE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
FE +K D WN MI GY ++G ++++F M K PN + +AVLSA
Sbjct: 223 LDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSA 282
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
CG G ++ I + +++ G++ ++D+ + G L++AR + + + V
Sbjct: 283 CGQLGALESGRWIHSYIENK-GIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVA 341
Query: 321 YHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILS 359
++S++ H S ++ ++ E +P + T ILS
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILS 382
>gi|357453191|ref|XP_003596872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240903|gb|ABD32761.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355485920|gb|AES67123.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 223/383 (58%), Gaps = 12/383 (3%)
Query: 8 EPNSVTFISVISACA---SLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLP 63
EPN +T I+++SACA S + FG +H K +D M+GTAL+DMY KCG L
Sbjct: 84 EPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLD 143
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF ++ G RN+++WNTMI G M NG + A++LF+ L + +W +I GF
Sbjct: 144 YARLVFDQM-GVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNV----VSWTVVIGGF 198
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ EA + F +MQ G+VP V +++SACA+L AL LG H V++ + +
Sbjct: 199 VKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNV 258
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +LI MY +CG AR+ FD + + WN++I G+ NG + A+ F M+
Sbjct: 259 KVLNSLIDMYARCGCIELARQVFDGMSQR--NLVSWNSIIVGFAVNGLADKALSFFRSMK 316
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+E ++PN S+ + L+AC HAG +D+ L+IF + D P+ EH+GC+VDL R+GRL
Sbjct: 317 KEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRL 376
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA ++I+++P P V SLL AC + +L E++ E+ P + +V+ SNIY
Sbjct: 377 KEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIY 436
Query: 363 AGLGRWEDVGRIRQMINDRQLTK 385
A +G+W+ ++R+ + +R L K
Sbjct: 437 AAVGKWDGASKVRREMKERGLQK 459
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA---D 160
L H+ +W S IS + +A F +M + P+ + ++LSACA
Sbjct: 43 LKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS 102
Query: 161 LSALKLGKETHGHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
+++ G H H + ++ M TALI MY KCG+ +AR FDQ ++ + W
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR--NLVSW 160
Query: 220 NAMISGYGRNGE-------------------------------YESAVEIFDLMQQEKVK 248
N MI GY +NG+ YE A+E F MQ V
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + +A++SAC + G + L + + M +F + + ++D+ R G ++ AR
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCIELAR 278
Query: 308 ELIRELPEPTVSVYHSLL 325
++ + + + ++S++
Sbjct: 279 QVFDGMSQRNLVSWNSII 296
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 222/390 (56%), Gaps = 12/390 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+++PN T +S +SACA L L+ G+++H + E T++G AL+DMY KCG + A
Sbjct: 205 NEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNALLDMYCKCGHVSVA 263
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +N+ W +M+ G ++ G+ ++A LFE D W +MI+G+ Q
Sbjct: 264 REIFDAMT-VKNVNCWTSMVTGYVICGQLDQARNLFE----RSPSRDIVLWTAMINGYVQ 318
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E LF +MQ G+ P V ++L+ CA AL+ GK H ++ + D +
Sbjct: 319 FNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVV 378
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY KCG + F+ +K D W ++I G NG+ A+E+F MQ
Sbjct: 379 GTALIEMYAKCGCIEKSFEIFNG--LKEKDTTSWTSIICGLAMNGKPSEALELFKAMQTC 436
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+KP+ +FVAVLSAC HAG V++ ++F M + ++P EH+GC +DLLGR+G L E
Sbjct: 437 GLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLGRAGLLQE 496
Query: 306 ARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
A EL+++LP E V +Y +LL AC + N D+GE +A L +++ + + +L++I
Sbjct: 497 AEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSLHTLLASI 556
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA RWEDV ++R + D + K+PG SA
Sbjct: 557 YASADRWEDVRKVRNKMKDLGIKKVPGYSA 586
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 75/392 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ + ++ G +VH +K + D + + +DMY + G + V
Sbjct: 106 PDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQV 165
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLG 127
F+E+ R+ ++WN MI+G + R E+A++++ + E KP+ AT
Sbjct: 166 FEEMP-DRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPNEAT------------ 212
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V S LSACA L L+LGKE H + I ++L+ M
Sbjct: 213 -----------------------VVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGN 248
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPAF 218
AL+ MY KCG S AR FD FE P D
Sbjct: 249 ALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVL 308
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+GY + +E + +F MQ VKP+ V +L+ C +G +++ I +D
Sbjct: 309 WTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYID 368
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
++ +K ++++ + G ++++ E+ L E + + S++ C +N E
Sbjct: 369 EN-RIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSII--CGLAMNGKPSE 425
Query: 339 EM----AMKLQEMEPENPTPFVILSNI-YAGL 365
+ AM+ ++P++ T +LS +AGL
Sbjct: 426 ALELFKAMQTCGLKPDDITFVAVLSACSHAGL 457
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 132/315 (41%), Gaps = 44/315 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+IS++ +C S+ L+ Q H + +++ DT+ M G A+ +F +
Sbjct: 10 TYISLLKSCKSMSQLK-QIQAHIFCVGLQQDRDTLNKLMAFSMDSSLGDFNYANRIFNYI 68
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ +N MI + +G A+ LF+ L G PD T+ ++ G +G
Sbjct: 69 HDP-SLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIG----- 122
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
++ G++ H V++ L D + + + M
Sbjct: 123 ------------------------------EVREGEKVHAFVVKTGLEFDPYVCNSFMDM 152
Query: 193 YMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPN 250
Y + G F FE PD D WN MISGY R +E AV+++ M E KPN
Sbjct: 153 YAELG---LVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRFEEAVDVYRRMWTESNEKPN 209
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
A+ V+ LSAC +++ +I + + L + ++D+ + G + ARE+
Sbjct: 210 EATVVSTLSACAVLRNLELGKEIHDYIASELDLTTIMGN--ALLDMYCKCGHVSVAREIF 267
Query: 311 RELPEPTVSVYHSLL 325
+ V+ + S++
Sbjct: 268 DAMTVKNVNCWTSMV 282
>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 1090
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/414 (35%), Positives = 234/414 (56%), Gaps = 38/414 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN++T S SACASL LQ G ++H +K+ +T++G +L+DMY KCG L A +
Sbjct: 348 EPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARH 407
Query: 68 VFQEL-------------------KGSR---------------NILTWNTMIAGMMLNGR 93
VF + G + N++TWN MI+G + NG
Sbjct: 408 VFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGD 467
Query: 94 SEKAMELFEGLAHEG-FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++AM+LF+ + +G K + A+WNS+I+G+ QLG + +A +F +MQS P+ +
Sbjct: 468 EDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTIL 527
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L ACA++ A K KE HG V+R +L + ++A +L+ Y K G ++R F+ K
Sbjct: 528 SILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSK 587
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN++I+GY +G +SA ++FD M+ ++PN + +++ A G AG VDK
Sbjct: 588 --DIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRH 645
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F+ + ++ + P +H+ MVDL GRSGRL +A E I ++P EP VS++ SLL AC H
Sbjct: 646 VFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFH 705
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
N +L A +L E+EP+N + +L YA G++E ++R++ + + K
Sbjct: 706 GNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKK 759
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 167/359 (46%), Gaps = 42/359 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ F ++ AC + L+ + +H L ++ + +++ ++KCG L A
Sbjct: 178 PDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKF 237
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP----------------- 111
F + R+ ++WN MIAG G ++A L + ++++GFKP
Sbjct: 238 FGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGD 296
Query: 112 ------------------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
D TW SMISGFSQ +A F+KM G+ P+ + S
Sbjct: 297 CDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIAS 356
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
SACA L +L+ G E H I+ + ++ + +LI MY KCG+ AR FD I
Sbjct: 357 ATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDT--ILE 414
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MI GY + G A E+F +++ V PN ++ A++S C G D+A+ +
Sbjct: 415 KDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDL 474
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGAC 328
F +M+ D G+K + ++ + G ++A + R++ P S+L AC
Sbjct: 475 FQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPAC 533
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 44/320 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+I+++ C + ++ GR++H + + + + + + T LV MY KCGCL A VF +
Sbjct: 82 TYINLLQTCIDVGSIELGRELH-VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGM 140
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ RN+ T W++MI +S+ E
Sbjct: 141 Q-ERNLYT-----------------------------------WSAMIGAYSREQRWKEV 164
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF M G++P +L AC + L+ K H VIR L+ ++ ++++
Sbjct: 165 VELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTA 224
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG+ S AR+FF + + D WN MI+GY + G + A + D M + KP
Sbjct: 225 FVKCGKLSLARKFFGNMDER--DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLV 282
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++ ++++ G D + + M + GL P + M+ +S R+ +A + ++
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKM-ESVGLAPDVYTWTSMISGFSQSSRISQALDFFKK 341
Query: 313 L----PEPTVSVYHSLLGAC 328
+ EP S AC
Sbjct: 342 MILAGVEPNTITIASATSAC 361
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L+ PNSVT +S++ ACA+++ + +++HG L+ +S+ + +LVD Y K G +
Sbjct: 515 QSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNI 574
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
+ VF + S++I+TWN++IAG +L+G S+ A +LF+ + + G +P+ T S+I
Sbjct: 575 KYSRTVFNGMS-SKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHA 633
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ GM + +F + + ++P+L +++ L E + +
Sbjct: 634 YGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIE---FIEDMPIEP 690
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S+ T+L++ G + A + E++PD+ + ++ Y G++E +++
Sbjct: 691 DVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRK 750
Query: 241 LMQQEKVKPNSA 252
L ++ +K +A
Sbjct: 751 LGKESAMKKCTA 762
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 17/247 (6%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH---GHVIRADLNKDE 183
G+ EA + + G S ++L C D+ +++LG+E H G V R +
Sbjct: 59 GLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRMGLVHRV----NP 114
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ T L+SMY KCG AR+ FD + + + W+AMI Y R ++ VE+F LM
Sbjct: 115 FVETKLVSMYAKCGCLKDARKVFDGMQER--NLYTWSAMIGAYSREQRWKEVVELFFLMM 172
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ V P++ F +L ACG+ ++ I +++ GL ++ + G+L
Sbjct: 173 GDGVLPDAFLFPKILQACGNCEDLETVKLIHSLV-IRCGLSCYMRLSNSILTAFVKCGKL 231
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI-- 361
AR+ + E V +++ A +C + G+E L M + P ++ NI
Sbjct: 232 SLARKFFGNMDERD-GVSWNVMIAGYCQKGN--GDEARRLLDTMSNQGFKPGLVTYNIMI 288
Query: 362 --YAGLG 366
Y+ LG
Sbjct: 289 ASYSQLG 295
>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 666
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 222/387 (57%), Gaps = 43/387 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF +++++C L + GRQ+H + +K +S +G++L+DMY K G + AH
Sbjct: 188 EPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHG 247
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D ++ISG++Q+G
Sbjct: 248 VFHCLP------------------------------------ERDVVACTAIISGYAQMG 271
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF ++Q GM + SVL+A + L+AL GK+ H HV+R+ +
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE- 245
+LI MY KCG +ARR FD P+ WNAM+ GY ++G +E+F LM++E
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSM---PERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 388
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
KVKP+S +++AVLS C H D L+IF M++ G++P H+GC+VDLLGR+GR++
Sbjct: 389 KVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE 448
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA + I+++P PT +++ SLLG+C H + ++G + KL E+EPEN +VILSN+YA
Sbjct: 449 EAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYA 508
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+WED+ IR ++ ++ +TK PG S
Sbjct: 509 SAGKWEDMRNIRDLMQEKAVTKEPGRS 535
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
++L+ C A++ G+ H H+I+ + T LI +Y KC AR FD E+
Sbjct: 95 TILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFD--EMP 152
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+ W AMIS Y + G A+ +F M + +PN +F +L++C + + Q
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 212
Query: 273 IFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTV 318
I ++ +K E ++D+ +SGR+ +A + LPE V
Sbjct: 213 IHSI-----AIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 257
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 218/384 (56%), Gaps = 5/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E +S T SV++ACA + L+ G++VH + +T +G ALV+MY KC L A
Sbjct: 274 EADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQL 333
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + R+ TWN +I+G + E L + + +GF+P+ TWN +ISG + G
Sbjct: 334 AFDGVT-ERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF +MQ++ + P + V +L ACA L+ + GK+ H H IR D +
Sbjct: 393 HNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGA 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A + +++ I + NAM++ Y +G + + +F M
Sbjct: 453 ALVDMYAKCGSIKHAMQVYNR--ISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGF 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F++VLS+C HAG V+ + F +M + + P +H+ C+VDLL R+GRLDEA
Sbjct: 511 RPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRLDEAY 569
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL++++P +P ++ +LLG C N +LGE A L E+EP N +V+L+N+YA G
Sbjct: 570 ELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAG 629
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D+ R RQMI DR + K PG S
Sbjct: 630 RWHDLDRTRQMIKDRGMHKSPGCS 653
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/480 (22%), Positives = 193/480 (40%), Gaps = 127/480 (26%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L + +S T+ S++ +C +L G+QVH TLK + T L+ MY + GCL
Sbjct: 56 LDKQIDSSTYASLLESCRTL---NLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDD 112
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE----------------- 107
A+ VF ++ RN+ +W +++ + +G E+A+ LFE L +
Sbjct: 113 ANLVFVKMP-QRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCG 171
Query: 108 ------------------------------GFK-PDPATWNSMISGFSQLGMRFEAFKLF 136
GF + ++N+MI G+ + G +A +LF
Sbjct: 172 GLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELF 231
Query: 137 EKMQSTG--------MVPSLK--------------------------CVTSVLSACADLS 162
++M+ G M+ + SVL+ACAD++
Sbjct: 232 DQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMA 291
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+L+ GKE H + L+ + + AL+ MY KC A+ FD + D A WN +
Sbjct: 292 SLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDG--VTERDTATWNVL 349
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY + E+ + M+ + +PN ++ ++S GH + AL++FT M
Sbjct: 350 ISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS-S 408
Query: 283 LKP---------------------KQEHF--------------GCMVDLLGRSGRLDEAR 307
L+P KQ H +VD+ + G + A
Sbjct: 409 LRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAM 468
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEMEPENPTPFVILSN-IYAG 364
++ + P + +++L A H + D G + + P++ T +LS+ ++AG
Sbjct: 469 QVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAG 528
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/450 (34%), Positives = 235/450 (52%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S+T +S++ A A L+ G VHG L+ +S + TALVDMY KCG + A
Sbjct: 128 RPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARV 187
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
+F + R +++WN+MI G + +G +E AM +F+ + EG +P
Sbjct: 188 IFDGMD-HRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246
Query: 112 -------------------DPATWNSMISGFS---------------------------- 124
D + NS+IS +S
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMIL 306
Query: 125 ---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q G EA F +MQS + P + SV+ A A+LS + K HG VIR L+K
Sbjct: 307 GYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDK 366
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+ MY KCG AR+ FD + WNAMI GYG +G +++VE+F
Sbjct: 367 NVFVMTALVDMYAKCGAIHTARKLFDMMNAR--HVITWNAMIDGYGTHGLGKTSVELFKE 424
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ +KPN +F+ LSAC H+G V++ L F M D+G++P +H+G MVDLLGR+G
Sbjct: 425 MKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAG 484
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RL++A + I+++P +P ++VY ++LGAC H N DLGE+ A ++ ++ P++ V+L+N
Sbjct: 485 RLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLAN 544
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA W V ++R ++ L K PG S
Sbjct: 545 IYATASMWGKVAKVRTIMEKSGLQKTPGCS 574
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P F ++ C L+ G+++HG + + T +V+MY KC + A
Sbjct: 25 SVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDA 84
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+N+F + + D WN+MISG++Q
Sbjct: 85 YNMFDRMP------------------------------------ERDLVCWNTMISGYAQ 108
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G A L +M G P + S+L A AD L++G HG+V+RA ++
Sbjct: 109 NGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNV 168
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TAL+ MY KCG S AR FD + + WN+MI GY ++G+ E A+ IF M E
Sbjct: 169 STALVDMYSKCGSVSIARVIFDGMDHRT--VVSWNSMIDGYVQSGDAEGAMLIFQKMLDE 226
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+P + + + L AC G +++ + ++ D L ++ + + R+D
Sbjct: 227 GVQPTNVTVMGALHACADLGDLERGKFVHKLV-DQLKLDSDVSVMNSLISMYSKCKRVDI 285
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA 363
A ++ + L T+ +++++ + + E EM+ N P F ++S I A
Sbjct: 286 AADIFKNLRNKTLVSWNAMILG---YAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPA 342
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
M+ G+++ A F +M+ + P + T +L C D S LK GKE HG VI +
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ + T +++MY KC Q + A FD+ + D WN MISGY +NG + A+ +
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPER--DLVCWNTMISGYAQNGFAKVALML 118
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMV 294
M +E +P+S + V++L A D L M + L+ E +V
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVA-----DTRLLRIGMAVHGYVLRAGFESLVNVSTALV 173
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NP 352
D+ + G + AR + + TV ++S++ ++ S E + Q+M E P
Sbjct: 174 DMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDG---YVQSGDAEGAMLIFQKMLDEGVQP 230
Query: 353 TPFVILSNIY--AGLGRWEDVGRIRQMINDRQL 383
T ++ ++ A LG E + ++++ +L
Sbjct: 231 TNVTVMGALHACADLGDLERGKFVHKLVDQLKL 263
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 233/450 (51%), Gaps = 71/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VTF+S++ AC+S L+ G+Q+ ++ SD + TAL+ MY KCG L AH
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF+++ +N++ WN MI + + + + A+ F+ L EG KP+ +T+
Sbjct: 470 VFEKI-SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEKM------------- 139
N+++S F G A LF M
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 140 ------------------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q +G+ P T +L+ACA AL G+ H + A +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDC 648
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + T LISMY KCG A + F + K + W +MI+GY ++G + A+E+F
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMIAGYAQHGRGKEALELFYQ 706
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQQE VKP+ +FV LSAC HAG +++ L F M +F ++P+ EH+GCMVDL GR+G
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L+EA E I ++ EP V+ +LLGAC HLN +L E+ A K E++P + FVILSN
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G W++V ++R+++ DR + K PG S
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 175/349 (50%), Gaps = 43/349 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V F+S++ AC L+ G++VH ++ ++ +GTA++ MY KCG + A
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +KG RN+++W +MI+GF+Q G
Sbjct: 369 VFDLVKG-RNVVSWT-----------------------------------AMIAGFAQHG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF F KM +G+ P+ S+L AC+ SALK G++ H+I A D+ + T
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+SMY KCG A R F++ I + WNAMI+ Y ++ +Y++A+ F + +E +
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEK--ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPNS++F ++L+ C + ++ + F +M GL+ +V + G L A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSA 568
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPT 353
+ L ++P+ + +++++ H + + + +QE ++P+ T
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 173/371 (46%), Gaps = 49/371 (13%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P+ TF+S+++ACA + GR+++ L LK +D +GTAL++M++KCG + A
Sbjct: 206 SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF L D TW SMI+G ++
Sbjct: 266 TKVFDNLPTR------------------------------------DLVTWTSMITGLAR 289
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A LF++M+ G+ P S+L AC AL+ GK+ H + + + +
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TA++SMY KCG A FD +K + W AMI+G+ ++G + A F+ M +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDL--VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
++PN +F+++L AC + + QI +++ +G + ++ + + G L
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLK 465
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTPFVILSNIY 362
+A + ++ + V +++++ A H D L A+ + ++P N + F + N+
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVC 524
Query: 363 AG-----LGRW 368
LG+W
Sbjct: 525 KSSDSLELGKW 535
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 177/413 (42%), Gaps = 85/413 (20%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +++ C L G +++ K Q D + L++MY KCG A +F ++
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ + D +WN ++ G+ Q G+ EA
Sbjct: 172 R------------------------------------EKDVYSWNLLLGGYVQHGLYEEA 195
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
FKL E+M + P + S+L+ACAD + G+E + +++A + D + TALI+M
Sbjct: 196 FKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINM 255
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG A + FD + D W +MI+G R+G ++ A +F M++E V+P+
Sbjct: 256 HIKCGDIGDATKVFDNLPTR--DLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKV 313
Query: 253 SFVAVLSACGH-----------------------------------AGHVDKALQIFTMM 277
+FV++L AC H G ++ AL++F ++
Sbjct: 314 AFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLV 373
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEA----RELIRELPEPTVSVYHSLLGACWCHLN 333
+ + M+ + GR+DEA ++I EP + S+LGAC
Sbjct: 374 KGRNVVS-----WTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428
Query: 334 SDLGEEMAMKLQE--MEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
G+++ + E ++ +LS +YA G +D R+ + I+ + +
Sbjct: 429 LKRGQQIQDHIIEAGYGSDDRVRTALLS-MYAKCGSLKDAHRVFEKISKQNVV 480
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 39/318 (12%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D N++++ S+ G EA ++ E++ S+ + + +++L C L G+ +
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H+ ++ + D M LI+MY KCG A++ FD +++ D WN ++ GY ++G
Sbjct: 134 NHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFD--DMREKDVYSWNLLLGGYVQHGL 191
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----DDDF--GLK 284
YE A ++ + M Q+ VKP+ +FV++L+AC A +VDK +++ ++ D D G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 285 PKQEHFGC-----------------------MVDLLGRSGRLDEARELIRELPE----PT 317
H C M+ L R GR +A L + + E P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNIYAGLGRWEDVGRIR 375
+ SLL AC + G+++ +++E+ + E ILS +Y G ED +
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEVF 370
Query: 376 QMINDRQLTKLPGISAGI 393
++ R + + AG
Sbjct: 371 DLVKGRNVVSWTAMIAGF 388
>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Cucumis sativus]
Length = 638
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/387 (37%), Positives = 222/387 (57%), Gaps = 43/387 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF +++++C L + GRQ+H + +K +S +G++L+DMY K G + AH
Sbjct: 160 EPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHG 219
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D ++ISG++Q+G
Sbjct: 220 VFHCLP------------------------------------ERDVVACTAIISGYAQMG 243
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF ++Q GM + SVL+A + L+AL GK+ H HV+R+ +
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE- 245
+LI MY KCG +ARR FD P+ WNAM+ GY ++G +E+F LM++E
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSM---PERTCISWNAMLVGYSKHGMAREVLELFKLMREEN 360
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
KVKP+S +++AVLS C H D L+IF M++ G++P H+GC+VDLLGR+GR++
Sbjct: 361 KVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVE 420
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA + I+++P PT +++ SLLG+C H + ++G + KL E+EPEN +VILSN+YA
Sbjct: 421 EAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYA 480
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+WED+ IR ++ ++ +TK PG S
Sbjct: 481 SAGKWEDMRNIRDLMQEKAVTKEPGRS 507
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L+ C A++ G+ H H+I+ + T LI +Y KC AR FD E+
Sbjct: 67 SILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFD--EMP 124
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+ W AMIS Y + G A+ +F M + +PN +F +L++C + + Q
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQ 184
Query: 273 IFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTV 318
I ++ +K E ++D+ +SGR+ +A + LPE V
Sbjct: 185 IHSI-----AIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDV 229
>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 1463
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/414 (35%), Positives = 234/414 (56%), Gaps = 38/414 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN++T S SACASL LQ G ++H +K+ +T++G +L+DMY KCG L A +
Sbjct: 348 EPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARH 407
Query: 68 VF-------------------QELKGSR---------------NILTWNTMIAGMMLNGR 93
VF Q G + N++TWN MI+G + NG
Sbjct: 408 VFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGD 467
Query: 94 SEKAMELFEGLAHEG-FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++AM+LF+ + +G K + A+WNS+I+G+ QLG + +A +F +MQS P+ +
Sbjct: 468 EDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTIL 527
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L ACA++ A K KE HG V+R +L + ++A +L+ Y K G ++R F+ K
Sbjct: 528 SILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYSRTVFNGMSSK 587
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN++I+GY +G +SA ++FD M+ ++PN + +++ A G AG VDK
Sbjct: 588 --DIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIAGMVDKGRH 645
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F+ + ++ + P +H+ MVDL GRSGRL +A E I ++P EP VS++ SLL AC H
Sbjct: 646 VFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTSLLTACRFH 705
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
N +L A +L E+EP+N + +L YA G++E ++R++ + + K
Sbjct: 706 GNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAMKK 759
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 167/359 (46%), Gaps = 42/359 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ F ++ AC + L+ + +H L ++ + +++ ++KCG L A
Sbjct: 178 PDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLARKF 237
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP----------------- 111
F + R+ ++WN MIAG G ++A L + ++++GFKP
Sbjct: 238 FGNMD-ERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQLGD 296
Query: 112 ------------------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
D TW SMISGFSQ +A F+KM G+ P+ + S
Sbjct: 297 CDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKMILAGVEPNTITIAS 356
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
SACA L +L+ G E H I+ + ++ + +LI MY KCG+ AR FD I
Sbjct: 357 ATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYSKCGKLEAARHVFDT--ILE 414
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MI GY + G A E+F +++ V PN ++ A++S C G D+A+ +
Sbjct: 415 KDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDL 474
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGAC 328
F +M+ D G+K + ++ + G ++A + R++ P S+L AC
Sbjct: 475 FQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPAC 533
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 44/320 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+I+++ C + ++ GR++H + + + + + + T LV MY KCGCL A VF +
Sbjct: 82 TYINLLQTCIDVGSIELGRELH-VRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGM 140
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ RN+ T W++MI +S+ E
Sbjct: 141 Q-ERNLYT-----------------------------------WSAMIGAYSREQRWKEV 164
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF M G++P +L AC + L+ K H VIR L+ ++ ++++
Sbjct: 165 VELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTA 224
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG+ S AR+FF + + D WN MI+GY + G + A + D M + KP
Sbjct: 225 FVKCGKLSLARKFFGNMDER--DGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLV 282
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++ ++++ G D + + M + GL P + M+ +S R+ +A + ++
Sbjct: 283 TYNIMIASYSQLGDCDLVIDLKKKM-ESVGLAPDVYTWTSMISGFSQSSRISQALDFFKK 341
Query: 313 L----PEPTVSVYHSLLGAC 328
+ EP S AC
Sbjct: 342 MILAGVEPNTITIASATSAC 361
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L+ PNSVT +S++ ACA+++ + +++HG L+ +S+ + +LVD Y K G +
Sbjct: 515 QSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNI 574
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
+ VF + S++I+TWN++IAG +L+G S+ A +LF+ + + G +P+ T S+I
Sbjct: 575 KYSRTVFNGMS-SKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHA 633
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ GM + +F + + ++P+L +++ L E + +
Sbjct: 634 YGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIE---FIEDMPIEP 690
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S+ T+L++ G + A + E++PD+ + ++ Y G++E +++
Sbjct: 691 DVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRK 750
Query: 241 LMQQEKVKPNSA 252
L ++ +K +A
Sbjct: 751 LGKESAMKKCTA 762
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 15/246 (6%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL--NKDES 184
G+ EA + + G S ++L C D+ +++LG+E H +R L +
Sbjct: 59 GLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELH---VRMGLVHRVNPF 115
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T L+SMY KCG AR+ FD + + + W+AMI Y R ++ VE+F LM
Sbjct: 116 VETKLVSMYAKCGCLKDARKVFDGMQER--NLYTWSAMIGAYSREQRWKEVVELFFLMMG 173
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ V P++ F +L ACG+ ++ I +++ GL ++ + G+L
Sbjct: 174 DGVLPDAFLFPKILQACGNCEDLETVKLIHSLV-IRCGLSCYMRLSNSILTAFVKCGKLS 232
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI--- 361
AR+ + E V +++ A +C + G+E L M + P ++ NI
Sbjct: 233 LARKFFGNMDERD-GVSWNVMIAGYCQKGN--GDEARRLLDTMSNQGFKPGLVTYNIMIA 289
Query: 362 -YAGLG 366
Y+ LG
Sbjct: 290 SYSQLG 295
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 220/384 (57%), Gaps = 6/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
NS+T S++ ACA Y++ GR+VHG L+ E + + + +ALV+MY L A
Sbjct: 175 RANSLTVSSILPACAD--YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARL 232
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+I++WN M+ LN E+ + LF + EG K + A+WN+ ISG Q G
Sbjct: 233 VFDSMY-HRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNG 291
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + KMQ +G+ P+ + S L C +L +L+ GKE HG+V R +D ++ T
Sbjct: 292 QHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITT 351
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG +R F+ K D WN MI +G+ ++ +F+ M V
Sbjct: 352 ALVLLYAKCGDLELSRHVFNTMPRK--DVVAWNTMIMANSMHGKGGESLILFNKMLDSGV 409
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PNS +F+ VLS C H+ D+ L +F M + + P +H+ CMVD+L R+GRL+EA
Sbjct: 410 EPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAY 469
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ IR++P EPT + + +LLGAC + N +LG A +L E+EP+N +V+LSNI
Sbjct: 470 DFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAK 529
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W + IR+M+ D+ L K PG S
Sbjct: 530 KWVEASEIRKMMRDKGLAKTPGRS 553
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 130/280 (46%), Gaps = 41/280 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +SV ACA+ L +++H ++ D ++G AL+DM+ KC + A
Sbjct: 74 RPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARC 133
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +++++W +M + G + + LF + G + + T
Sbjct: 134 VFDDMV-VKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT------------ 180
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+S+L ACAD +KLG+E HG ++R ++ + +++
Sbjct: 181 -----------------------VSSILPACADY--IKLGREVHGFILRNEMEGNVYVSS 215
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++MY AR FD + D WN M++ Y N EYE + +F M++E +
Sbjct: 216 ALVNMYASSLGLKQARLVFDSMYHR--DIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGI 273
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
K N AS+ A +S C G + AL I M D G+KP +
Sbjct: 274 KLNQASWNAAISGCMQNGQHELALGILCKMQDS-GIKPNR 312
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
+I + +G ++A+ LF+ + +PD TW +ISG +Q G +A ++ + S
Sbjct: 17 LIKTCLNSGDLKRALYLFDKIP----EPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRN 72
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ P + SV ACA L + K+ H I+ NKD + ALI M+ KC + AR
Sbjct: 73 VRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGAR 132
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD +K D W +M Y G + +F M ++ NS + ++L AC
Sbjct: 133 CVFDDMVVK--DVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD 190
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
+ + + F + ++ ++ +V++ S L +AR + + + ++
Sbjct: 191 YIKLGREVHGFILRNE---MEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNV 247
Query: 324 LLGA 327
+L A
Sbjct: 248 MLTA 251
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 10/164 (6%)
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ LI + G A FD+ I D W +ISG+ ++G + A++I+ +
Sbjct: 14 SIKLIKTCLNSGDLKRALYLFDK--IPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSR 71
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD--DFGLKPKQEHFGCMVDLLGRSGRL 303
V+P+ ++V AC +G + A +I DD FG ++D+ G+ +
Sbjct: 72 NVRPDKFVLLSVAKACAASGDLVVAKKIH---DDAIQFGFNKDLVLGNALIDMFGKCKFV 128
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+ AR + ++ V + S+ +C++N + + + +EM
Sbjct: 129 NGARCVFDDMVVKDVVSWTSM---TYCYVNCGMCRQGILLFREM 169
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 220/385 (57%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT +S ISA A L+ L +G+ HG ++ + IG ++DMY+KCG A
Sbjct: 330 RPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACR 389
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L ++ +++WN++ AG + NG E A E+F + + WN+MISG Q
Sbjct: 390 VF-DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPER----NAVFWNTMISGLVQKS 444
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A +LF +MQ G+ + + SAC L A +L K H ++ + + D + T
Sbjct: 445 LFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNT 504
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ M+ +CG P A + F++ + D + W A I G E A +F+ M + V
Sbjct: 505 ALVDMFARCGDPQSAMQVFNK--MTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGV 562
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ FV VL+AC H G V++ L IF++M+D G+ P+ EH+GCMVDLLGR+G L EA
Sbjct: 563 KPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMVDLLGRAGLLREAF 621
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P EP V+ SLL AC H N ++ A ++ E+ P+ V+LSNIYA G
Sbjct: 622 DLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAG 681
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W DV R+R + ++ + K+PG S+
Sbjct: 682 KWTDVARVRLNLREKGVRKVPGSSS 706
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 156/348 (44%), Gaps = 66/348 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SVT + VISACA L L G +V ++ + + ++ ALVDMY+KCG + A
Sbjct: 229 RPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKR 288
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E RN++ +NT+++ G + +A+ + + + +G +PD T
Sbjct: 289 LFDECV-DRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVT------------ 335
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S +SA A L L GK HG+VIR L +S+
Sbjct: 336 -----------------------MLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGN 372
Query: 188 ALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAF 218
+I MYMKCG+P A R FD +I + F
Sbjct: 373 VIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVF 432
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN MISG + +E A+E+F MQ E +K + + + + SACG+ G + A + T ++
Sbjct: 433 WNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIE 492
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ G+ +VD+ R G A ++ ++ E VS + + +G
Sbjct: 493 KN-GIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIG 539
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 38/252 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V+S C + G QVHG +K+ + D I L+ Y +CG + H V
Sbjct: 129 PNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKV 188
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ G SE+ + +W S+I G+++
Sbjct: 189 FE---------------------GMSER---------------NVVSWTSLICGYARGDR 212
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M G+ PS + V+SACA L L +G+ ++ L ++ M A
Sbjct: 213 PKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNA 272
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MYMKCG A+R FD E + +N ++S Y R G A+ I D M Q+ +
Sbjct: 273 LVDMYMKCGAIDAAKRLFD--ECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPR 330
Query: 249 PNSASFVAVLSA 260
P+ + ++ +SA
Sbjct: 331 PDRVTMLSAISA 342
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 130/274 (47%), Gaps = 14/274 (5%)
Query: 94 SEKAMELFEGLAHEGFKPDPATW--NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
+ KA ELF+ E + D A + NS+I G+S G+ EA L+ +M G+ P+
Sbjct: 79 ARKAFELFK----EDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTF 134
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
VLS C ++A G + HG V++ L +D + LI Y +CG + F+
Sbjct: 135 PFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE 194
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ + W ++I GY R + AV +F M + ++P+S + V V+SAC +D
Sbjct: 195 R--NVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGE 252
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++ + + GLK + +VD+ + G +D A+ L E + + +Y+++L +
Sbjct: 253 RVCAYI-GELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSN---Y 308
Query: 332 LNSDLGEEMAMKLQEMEPENPTP--FVILSNIYA 363
L E L EM + P P +LS I A
Sbjct: 309 ARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 342
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 233/450 (51%), Gaps = 71/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VTF+S++ AC+S L+ G+Q+ ++ SD + TAL+ MY KCG L AH
Sbjct: 410 EPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHR 469
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF+++ +N++ WN MI + + + + A+ F+ L EG KP+ +T+
Sbjct: 470 VFEKI-SKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSD 528
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEKM------------- 139
N+++S F G A LF M
Sbjct: 529 SLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIA 588
Query: 140 ------------------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q +G+ P T +L+ACA AL G+ H + A +
Sbjct: 589 GFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDC 648
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + T LISMY KCG A + F + K + W +MI+GY ++G + A+E+F
Sbjct: 649 DVLVGTGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMITGYAQHGRGKEALELFYQ 706
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQQE VKP+ +FV LSAC HAG +++ L F M +F ++P+ EH+GCMVDL GR+G
Sbjct: 707 MQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAG 765
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L+EA E I ++ EP V+ +LLGAC HLN +L E+ A K E++P + FVILSN
Sbjct: 766 LLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSN 825
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G W++V ++R+++ DR + K PG S
Sbjct: 826 IYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 175/349 (50%), Gaps = 43/349 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V F+S++ AC L+ G++VH ++ ++ +GTA++ MY KCG + A
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +KG RN+++W +MI+GF+Q G
Sbjct: 369 VFDLVKG-RNVVSWT-----------------------------------AMIAGFAQHG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF F KM +G+ P+ S+L AC+ SALK G++ H+I A D+ + T
Sbjct: 393 RIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRT 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+SMY KCG A R F++ I + WNAMI+ Y ++ +Y++A+ F + +E +
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEK--ISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGI 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPNS++F ++L+ C + ++ + F +M GL+ +V + G L A
Sbjct: 511 KPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHVSNALVSMFVNCGDLMSA 568
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPT 353
+ L ++P+ + +++++ H + + + +QE ++P+ T
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKIT 617
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 173/371 (46%), Gaps = 49/371 (13%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P+ TF+S+++ACA + GR+++ L LK +D +GTAL++M++KCG + A
Sbjct: 206 SVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDA 265
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF L D TW SMI+G ++
Sbjct: 266 TKVFDNLPTR------------------------------------DLVTWTSMITGLAR 289
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A LF++M+ G+ P S+L AC AL+ GK+ H + + + +
Sbjct: 290 HGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYV 349
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TA++SMY KCG A FD +K + W AMI+G+ ++G + A F+ M +
Sbjct: 350 GTAILSMYTKCGSMEDALEVFDL--VKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIES 407
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
++PN +F+++L AC + + QI +++ +G + ++ + + G L
Sbjct: 408 GIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLK 465
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTPFVILSNIY 362
+A + ++ + V +++++ A H D L A+ + ++P N + F + N+
Sbjct: 466 DAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP-NSSTFTSILNVC 524
Query: 363 AG-----LGRW 368
LG+W
Sbjct: 525 KSSDSLELGKW 535
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 176/379 (46%), Gaps = 56/379 (14%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSR---NILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
+AL+ + +K L ++ +K S +I WNT+I G + A ++F+ +
Sbjct: 114 SALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMR- 172
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+ D +WN ++ G+ Q G+ EAFKL E+M + P + S+L+ACAD +
Sbjct: 173 ---EKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDK 229
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+E + +++A + D + TALI+M++KCG A + FD + D W +MI+G
Sbjct: 230 GRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTR--DLVTWTSMITGL 287
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH----------------------- 263
R+G ++ A +F M++E V+P+ +FV++L AC H
Sbjct: 288 ARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEI 347
Query: 264 ------------AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA----R 307
G ++ AL++F ++ + + M+ + GR+DEA
Sbjct: 348 YVGTAILSMYTKCGSMEDALEVFDLVKGRNVVS-----WTAMIAGFAQHGRIDEAFLFFN 402
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNIYAGL 365
++I EP + S+LGAC G+++ + E ++ +LS +YA
Sbjct: 403 KMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLS-MYAKC 461
Query: 366 GRWEDVGRIRQMINDRQLT 384
G +D R+ + I+ + +
Sbjct: 462 GSLKDAHRVFEKISKQNVV 480
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 39/318 (12%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D N++++ S+ G EA ++ E++ S+ + + +++L C L G+ +
Sbjct: 74 DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIY 133
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H+ ++ + D M LI+MY KCG A++ FD +++ D WN ++ GY ++G
Sbjct: 134 NHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFD--DMREKDVYSWNLLLGGYVQHGL 191
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----DDDF--GLK 284
YE A ++ + M Q+ VKP+ +FV++L+AC A +VDK +++ ++ D D G
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTA 251
Query: 285 PKQEHFGC-----------------------MVDLLGRSGRLDEARELIRELPE----PT 317
H C M+ L R GR +A L + + E P
Sbjct: 252 LINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPD 311
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNIYAGLGRWEDVGRIR 375
+ SLL AC + G+++ +++E+ + E ILS +Y G ED +
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS-MYTKCGSMEDALEVF 370
Query: 376 QMINDRQLTKLPGISAGI 393
++ R + + AG
Sbjct: 371 DLVKGRNVVSWTAMIAGF 388
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 224/384 (58%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN VT +SV+ AC L FG +VH + + + D + AL+ +Y KCG L A
Sbjct: 225 RPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARE 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ ++ +T+ +I+G+ML+G ++++ELF G+ + +TWN++I+G Q
Sbjct: 285 LFDEMS-EKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQIL----STWNAVITGLVQNN 339
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
L +MQ+ G P+ ++SVLS A S+LK GKE H + I+ +++ +AT
Sbjct: 340 RHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVAT 399
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY K G A+R FDQ K W A+IS Y +G+ A+ +F M ++ +
Sbjct: 400 AIIDMYAKSGYLRGAQRVFDQS--KDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGI 457
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F AVL+AC H G VDKA +IF M +G++P EH+ C+V LG++ RL EA+
Sbjct: 458 QPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAK 517
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E + ++P EP+ V+ +LL + +LG+ + L E+EPEN +VI++N+Y+ G
Sbjct: 518 EFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAG 577
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ +R+ +N L K+PG S
Sbjct: 578 RWKEADEVRERMNKVGLQKIPGSS 601
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 158/388 (40%), Gaps = 71/388 (18%)
Query: 6 SDEPNSVTFISVISACASLLY--LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
S+ N+++ ++ + +S ++ G++VHG L+ +D + AL+ Y KC L
Sbjct: 119 SNLVNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLD 178
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+ VF + K D +WNSMISG+
Sbjct: 179 LSRKVFDRMT------------------------------------KRDVVSWNSMISGY 202
Query: 124 SQLGMRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
SQ G+ + L+ +M +G P+ V SVL AC L G E H ++ + D
Sbjct: 203 SQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEID 262
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFE-----------------------------IKP 213
S+ ALI +Y KCG +AR FD+ +K
Sbjct: 263 ISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKT 322
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ WNA+I+G +N +E +++ MQ +PN+ + +VLS + + +I
Sbjct: 323 QILSTWNAVITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEI 382
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH-- 331
+ G ++D+ +SG L A+ + + + ++ ++ +++ A H
Sbjct: 383 HSYA-IKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGD 441
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILS 359
N LG M Q ++P+ T +L+
Sbjct: 442 ANLALGLFHEMLKQGIQPDPVTFTAVLA 469
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 45/336 (13%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
+Q+H + + + + LV +Y K L A VF ++ +N ++N M+
Sbjct: 43 AKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIP-HKNTFSYNAMLISYS 101
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP--S 147
L+ R A++ LF + S+ +V S
Sbjct: 102 LHNRHGDALD-----------------------------------LFSSLASSNLVNNIS 126
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ C+ LS+ LS +KLGKE HG V+R + D + ALI+ Y KC +R+ FD
Sbjct: 127 ITCLLKSLSSFT-LSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFD 185
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGH 266
+ + D WN+MISGY + G YE ++ +++ +PN + V+VL ACG
Sbjct: 186 R--MTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQD 243
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ +++ + D+ ++ ++ L + G LD AREL E+ E Y +++
Sbjct: 244 LAFGMEVHKFIVDN-QVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIIS 302
Query: 327 ACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSN 360
H D E+ MK Q + N ++ N
Sbjct: 303 GLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQN 338
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 38/260 (14%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L PN+VT SV+S A L+ G+++H +KI + + TA++DMY K G L
Sbjct: 352 QALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYL 411
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF + K R+++ W +I+ ++G + A+ LF + +G +PDP T+ ++++
Sbjct: 412 RGAQRVFDQSK-DRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAA 470
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALK------------- 165
+ GM +A+++FE M + G+ P ++ CV L LS K
Sbjct: 471 CAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAK 530
Query: 166 -LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G HG I +D+ +S+ L FEI+P++ + M +
Sbjct: 531 VWGALLHGASISSDVELGKSVCDYL-------------------FEIEPENTGNYVIMAN 571
Query: 225 GYGRNGEYESAVEIFDLMQQ 244
Y + G ++ A E+ + M +
Sbjct: 572 LYSQAGRWKEADEVRERMNK 591
>gi|296081956|emb|CBI20961.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 219/384 (57%), Gaps = 37/384 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ +CA L+ G+QVHG K ++S+T++ +LV+MY+KC L AH V
Sbjct: 160 PDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRV 219
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ +E+ +F +W +++SG++++G
Sbjct: 220 FEEM---------------------TERDATIF-------------SWTAIVSGYARIGC 245
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A + F +MQ G+ P + SVL CA L AL+LGK H + +A ++ + A
Sbjct: 246 YADALEFFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNA 305
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG RR FDQ +K D W+ MI G +G A+E+F MQ+ K++
Sbjct: 306 LIEMYAKCGSIDQGRRLFDQ--MKERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIE 363
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV +L+AC HAG +++ L+ F M D+ ++P EH+GC+V+LLG SGRLD+A E
Sbjct: 364 PSIITFVGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALE 423
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++++P +P ++ SLL +C H N + L E+EP + +V+LSN+YA LG+
Sbjct: 424 LVKKMPRKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGK 483
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R+++ + + K PG S+
Sbjct: 484 WDGVSRMRKLMRSKSMKKTPGCSS 507
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 52/351 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F+ ++ C +++ L +++H +K + + T +VD+ C H
Sbjct: 62 FVPILKDCPNIVEL---KKIHAHIVKFSLSQSSFLVTKMVDV--------CNHY------ 104
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G +E A LF+G+A P+ +N+MI + + A
Sbjct: 105 ------------------GETEYANLLFKGVA----DPNAFLYNAMIRAYKHNKVYVLAI 142
Query: 134 KLFEKM-----QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++++M + P V+ +CA L LGK+ HGHV + + + +
Sbjct: 143 TVYKQMLGNPHGENPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENS 202
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY+KC A R F++ + W A++SGY R G Y A+E F MQ ++
Sbjct: 203 LVEMYVKCDSLDDAHRVFEEMTERDATIFSWTAIVSGYARIGCYADALEFFRRMQMVGIE 262
Query: 249 PNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ S V+VL C G ++ K + I+ D G ++++ + G +D+
Sbjct: 263 PDEISLVSVLPDCAQLGALELGKWIHIYA---DKAGFLRNICVCNALIEMYAKCGSIDQG 319
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R L ++ E V + +++ H + E+ QEM+ P +I
Sbjct: 320 RRLFDQMKERDVISWSTMIVGLANHGRAREAIEL---FQEMQKAKIEPSII 367
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 131/280 (46%), Gaps = 27/280 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ CA L L+ G+ +H K + + AL++MY KCG +
Sbjct: 262 EPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRR 321
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++K R++++W+TMI G+ +GR+ +A+ELF+ + +P T+ +++ + G
Sbjct: 322 LFDQMK-ERDVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITFVGLLTACAHAG 380
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADL-SALKLGKETHGHVIRADLNKD 182
+ E + FE M+ + P ++ C+ ++L L AL+L K + D
Sbjct: 381 LLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVK-------KMPRKPD 433
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L+S G A + E++P D + + + Y G+++ + L
Sbjct: 434 SPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSRMRKL 493
Query: 242 MQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
M+ + +K P +S VD +Q F DD
Sbjct: 494 MRSKSMKKTPGCSSI-----------EVDNMVQEFASGDD 522
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 227/414 (54%), Gaps = 34/414 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N TF+ V+ A Q GR VHG +K+ D AL+ MYLKCG + AH
Sbjct: 123 ELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHL 182
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF------------------EGLAHEGF 109
+F E+ + N++TWNTMI G G +E+A LF L H
Sbjct: 183 LFDEMP-NHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDI 241
Query: 110 ---------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
+ D +W SMIS + Q G EA +LF++M G+ +TS+LSACA
Sbjct: 242 ARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQ 301
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP-DDPAFW 219
+ AL +G+ H ++ R+ L D + TAL+ MY KCG A F F P + W
Sbjct: 302 IGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTA---FGVFNTMPRKNLCSW 358
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
NAM+SG +G +A+E+F M+ V PN +FVAVLSAC H G V++ + F MD
Sbjct: 359 NAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDK 418
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGE 338
+F + PK EH+GCMVD+L R G ++EA+E+IR +P EP V ++ +LL AC H +++GE
Sbjct: 419 EFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGE 478
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL-TKLPGISA 391
++ +Q++ E+ +V+LSNI+A +W +V + R+M+ + K+PG S+
Sbjct: 479 DVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSS 532
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 23/240 (9%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+ A +F G+ + PD +W +MI GF + +A + + M+ G+ + V
Sbjct: 77 DYAFWVFVGINY----PDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFV 132
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L A + + G+ HG +++ D ALI MY+KCG + A FD E+
Sbjct: 133 LKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFD--EMPNH 190
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ WN MI+G G+ E A +F M + N S+ AV+ GHVD A +F
Sbjct: 191 NVVTWNTMITGCFGCGDTERARRLFGEMPER----NVGSWNAVVGGYSKLGHVDIARSLF 246
Query: 275 TMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVS----VYHSLLGAC 328
+M P+++ +G M+ ++GR EA EL +E+ VS + S+L AC
Sbjct: 247 DLM-------PERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSAC 299
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 210/383 (54%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T ++V+SACA L+ G V S+ + AL+DMY KCG L
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDL------ 315
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+KA +LFEG+ + D +WN MI G+S +
Sbjct: 316 --------------------------DKARDLFEGICEK----DIISWNVMIGGYSHMNS 345
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN-KDESMAT 187
EA LF KMQ + + P+ S+L ACA L AL LGK H ++ + L + S+ T
Sbjct: 346 YKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWT 405
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A++ F +KP WNAMISG +G A+E+F M+ E
Sbjct: 406 SLIDMYAKCGNIEAAKQVFAG--MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGF 463
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV VLSAC HAG V+ Q F+ M +D+ + PK +H+GCM+DLLGR+G DEA
Sbjct: 464 EPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAE 523
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L++ + +P +++ SLLGAC H N +LGE A L E+EPENP +V+LSNIYA G
Sbjct: 524 ALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAG 583
Query: 367 RWEDVGRIRQMINDRQLTKLPGI 389
RW+DV RIR +ND+ + K I
Sbjct: 584 RWDDVARIRTKLNDKGMKKXQDI 606
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 197/382 (51%), Gaps = 15/382 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS TF ++ +CA + Q G+Q+HG LK+ +SD + T+L++MY + G L A
Sbjct: 129 EPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAEL 188
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+ +++ +I G L G + A LFE + D +WN+MI+G++Q G
Sbjct: 189 VFSK-SSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR----DAVSWNAMIAGYAQSG 243
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F++M+ + P+ + +VLSACA +L+LG + L + +
Sbjct: 244 RFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVN 303
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR F+ I D WN MI GY Y+ A+ +F MQQ V
Sbjct: 304 ALIDMYSKCGDLDKARDLFEG--ICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV 361
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV++L AC + G +D I +D F + ++D+ + G ++ A+
Sbjct: 362 EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAK 421
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++ +++++ H ++++ E+ M+ + EP++ T +LS +AG
Sbjct: 422 QVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAG 481
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
L ++GR M+ D ++
Sbjct: 482 L---VELGRQCFSSMVEDYDIS 500
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 85/395 (21%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDM--YLKCGCLPCAHNVFQEL 72
++++S C S L +Q+H +K + + L++ G L A +F+ +
Sbjct: 36 LTLLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESI 92
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ N WNTMI G NS+ S S +G A
Sbjct: 93 E-QPNQFIWNTMIRG-----------------------------NSLSS--SPVG----A 116
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ +M G+ P+ +L +CA + A + GK+ HGHV++ L D + T+LI+M
Sbjct: 117 IDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINM 176
Query: 193 YMKCGQPSW-------------------------------ARRFFDQFEIKPDDPAFWNA 221
Y + G+ + ARR F++ ++ D WNA
Sbjct: 177 YAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVR--DAVSWNA 234
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI+GY ++G +E A+ F M++ V PN ++ V VLSAC +G ++ + + ++D
Sbjct: 235 MIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDH- 293
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
GL ++D+ + G LD+AR+L + E + ++ ++G + H+NS E +A
Sbjct: 294 GLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGG-YSHMNS-YKEALA 351
Query: 342 M--KLQE--MEPENPTPFVIL-SNIYAG---LGRW 368
+ K+Q+ +EP + T IL + Y G LG+W
Sbjct: 352 LFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKW 386
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 205/383 (53%), Gaps = 38/383 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T + V+ ACA L L G +HGL +K+ +SD + AL+DMY KCG LP A +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + F D TWN +I+ + Q G
Sbjct: 589 FNK-----------------------------------TDFTKDEVTWNVIIAAYMQNGH 613
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +M+ P+ SVL A A L+A + G H +I+ + + +
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ ++ + F++ + K D WNAM+SGY +G + A+ +F LMQ+ +V+
Sbjct: 674 LIDMYAKCGQLDYSEKLFNEMDHK--DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+S SFV+VLSAC HAG V++ +IF M D + +KP EH+ CMVDLLGR+G DE
Sbjct: 732 IDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP V+ +LLG+C H N LGE L ++EP NP FV+LS+IYA GR
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGR 851
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D G+ R +ND L K PG S
Sbjct: 852 WADAGKARSKMNDLGLKKTPGCS 874
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 167/379 (44%), Gaps = 39/379 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +S++ ACA L L+ G+ +H T+K + SD GTALV MY KCG A
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + SR+I+TWN++I G G A+++F L PD T
Sbjct: 487 TFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTM----------- 534
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
G+VP ACA L+ L G HG +++ D +
Sbjct: 535 --------------VGVVP----------ACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A F++ + D+ WN +I+ Y +NG + A+ F M+ E
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVT-WNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PNS +FV+VL A + + + F G ++D+ + G+LD +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSE 688
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLG 366
+L E+ ++++L H + D + +QE + + + FV + + G
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAG 748
Query: 367 RWEDVGRIRQMINDRQLTK 385
E+ +I ++D+ K
Sbjct: 749 LVEEGRKIFHSMSDKYHIK 767
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 42/352 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N V+ +S A A + L+ G+++HG L+ SD ++ T L+ MY KCG
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG--------- 378
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+EKA +LF GL D W+++I+ Q G
Sbjct: 379 -----------------------ETEKAKQLFWGLQGR----DLVAWSAIIAALVQTGYP 411
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF++MQ+ M P+ + S+L ACADLS LKLGK H ++AD++ D S TAL
Sbjct: 412 EEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTAL 471
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+SMY KCG + A F++ + D WN++I+GY + G+ +A+++F ++ + P
Sbjct: 472 VSMYAKCGFFTAALTTFNRMSSR--DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ + V V+ AC +D+ I ++ G + ++D+ + G L A L
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLI-VKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 310 IRELPEPTVSVYHSLLGACWC---HLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+ V +++ A + H + M+L+ P + T +L
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 154/352 (43%), Gaps = 54/352 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF V+ AC L LQ G HG + + D IG LVDMY K G L A
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R+++ WN MIAG+ +SE DP
Sbjct: 186 VFDKMP-KRDVVAWNAMIAGL---SQSE----------------DPC------------- 212
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F MQ G+ PS + ++ LS ++L + HG+V R D + +++
Sbjct: 213 ---EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSN 267
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI +Y KCG ARR FDQ + DD + W M++GY NG + +E+FD M+ V
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQM-VDQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ N S V+ A ++K +I +D D + ++ + + G
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP------LMVMYAKCGE 379
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
++A++L L + + +++ A + + EE QEM+ + P
Sbjct: 380 TEKAKQLFWGLQGRDLVAWSAIIAAL---VQTGYPEEALSLFQEMQNQKMKP 428
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 51/324 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+SV+ +++ L ++ R +HG + + + + L+D+Y KCG + A
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +W +M++G++ G
Sbjct: 285 VFDQM------------------------------------VDQDDVSWGTMMAGYAHNG 308
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +LF+KM+ + + S A A+ L+ GKE HG ++ ++ D +AT
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG+ A++ F + ++ D W+A+I+ + G E A+ +F MQ +K+
Sbjct: 369 PLMVMYAKCGETEKAKQLF--WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 248 KPNSASFVAVLSACGHAG--HVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGR 302
KPN + +++L AC + K++ FT+ MD D +V + + G
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT------ALVSMYAKCGF 480
Query: 303 LDEARELIRELPEPTVSVYHSLLG 326
A + + ++SL+
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLIN 504
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 111 PDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+P+ WNSMI +++ EA +++ M G+ P T VL AC L+ G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
HG + R L +D + L+ MY K G AR FD+ + D WNAMI+G +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQ 207
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQ 287
+ + AV+ F MQ V+P+S S + + +++ I + DF
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN 267
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPE 315
++DL + G +D AR + ++ +
Sbjct: 268 G----LIDLYSKCGDVDVARRVFDQMVD 291
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 209/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T S++ AC+ + LQ G+ +HG ++ ++D + ++L+D+Y KCG + A NV
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ + K + +WN MISG+ ++G
Sbjct: 558 FQNMP------------------------------------KTNVVSWNVMISGYVKVGS 581
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M+ G+ P TSVL AC+ L+ L+ GKE H +I + L +E + A
Sbjct: 582 YLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGA 641
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A F+Q + D W +MI+ YG +G+ A+++F+ MQQ K
Sbjct: 642 LLDMYAKCGAVDEALHIFNQ--LPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 699
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+A+LSAC HAG VD+ F M ++G KP EH+ C++DLLGR GRL EA E
Sbjct: 700 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 759
Query: 309 LIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+++ P+ V + +L AC H DLGE++ L E +P++P+ ++ILSN+YA +
Sbjct: 760 ILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 819
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++R I + L K PG S
Sbjct: 820 KWDEVRKVRLKIKELGLKKNPGCS 843
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 159/324 (49%), Gaps = 49/324 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T+ SV+ AC+ L + +G+ VH +K D ++ ++ V MY KC N
Sbjct: 295 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC-------N 347
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E A++LF+ + D A+WN++IS + Q G
Sbjct: 348 VF-------------------------EDAIKLFDEMPER----DVASWNNVISCYYQDG 378
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +LFE+M+ +G P +T+V+S+CA L L+ GKE H ++R+ D +++
Sbjct: 379 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 438
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A+ F+Q + K + WN+MI+GY G+ +S +E+F M +E +
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 496
Query: 248 KPNSASFVAVLSACGHA-----GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P + ++L AC + G I ++ D + ++DL + G
Sbjct: 497 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVN------SSLIDLYFKCGN 550
Query: 303 LDEARELIRELPEPTVSVYHSLLG 326
+ A + + +P+ V ++ ++
Sbjct: 551 IGSAENVFQNMPKTNVVSWNVMIS 574
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+++TF SV+ AC+ L L+ G+++H ++ + + + ++ AL+DMY KCG + A +
Sbjct: 598 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 657
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L R+ ++W +MIA +G++ +A++LFE + KPD T+ +++S S G
Sbjct: 658 IFNQLP-ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 716
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F +M G P+++ + ++ + L+ E D+ +D +
Sbjct: 717 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRT--PDIREDVGLL 774
Query: 187 TALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ L S ++ K R E PDDP+ + + + Y +++ ++ ++
Sbjct: 775 STLFSACHLHKKLDLGEQIGRLL--IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIK 832
Query: 244 QEKVKPN 250
+ +K N
Sbjct: 833 ELGLKKN 839
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 226/418 (54%), Gaps = 38/418 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ T+ V+ CAS L FG VHG ++ SD + ALVDMY KCG + AH VF
Sbjct: 131 NNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVF 190
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT-------------- 115
+ R+++ W MI R KA+ LF + EGF D T
Sbjct: 191 DRML-IRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDG 249
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WNSM+SG++Q G +A LF +MQ++ P+ +
Sbjct: 250 RMAISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 309
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
+SAC+ L + LG++ H VI + ++ D ++ A++ MYMKCG A F+ E+
Sbjct: 310 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 369
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D + WN +ISGYG +G + A+E+F MQ E V+PN +F ++LSAC HAG +D+ + F
Sbjct: 370 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 429
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M ++P+ +H+ CMVD+LGR+G L+EA LI+++P P+ V+ +LL AC H N
Sbjct: 430 ADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 488
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
++LGE A L ++EPE+ +V++SNIYA +W++V +RQ + R L K S
Sbjct: 489 TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSV 546
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT + ++SAC+ L GR++H + + DT + A++DMY+KCG L A
Sbjct: 300 DPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVE 359
Query: 68 VFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + G R++ +WN +I+G ++G ++A+ELF + EG +P+ T+ S++S S
Sbjct: 360 MFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHA 419
Query: 127 GMRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
G+ E K F M + P +K C+ +L L+ A +L K+ D
Sbjct: 420 GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKI------PSRPSD 473
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
E L++ + + F+++P+ ++ M + Y + +++ + M
Sbjct: 474 EVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNM 533
Query: 243 QQEKVKPNSASFVAVLSACGHAGHV 267
+ +K +A V H H
Sbjct: 534 KSRGLKKPAAFSVIEFGTEVHGFHT 558
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 102/228 (44%), Gaps = 19/228 (8%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ N+M+ ++ G +EA L+ MQ G+ + VL CA G+
Sbjct: 95 PNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVV 154
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG V+R D + AL+ MY KCG+ A FD+ I+ D W AMI+ Y +
Sbjct: 155 HGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIR--DVVCWTAMITLYEQAE 212
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH----VDKALQIFTMMDDDFGLKPK 286
A+ +F MQ+E + + ++V SA G G + +A +F M++ G+
Sbjct: 213 RPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRMEERNGIS-- 270
Query: 287 QEHFGCMVDLLGRSGRLDEARELIREL------PEPTVSVYHSLLGAC 328
+ M+ ++GR +A L ++ P P ++ ++ AC
Sbjct: 271 ---WNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALI--MVSAC 313
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 221/383 (57%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T S++ A A L L++G++VHG L+ + D+ IG +L+ +Y+ CG
Sbjct: 335 PDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCG-------- 386
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S A LF+G+ + +WN+MISG+SQ G+
Sbjct: 387 ------------------------ESSSARLLFDGME----EKSSVSWNAMISGYSQNGL 418
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LF K+ S G PS V SVL AC+ SAL+LGKETH + ++A L +D +A +
Sbjct: 419 PEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACS 478
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I MY K G +R FD +K D A WNA+I+ YG +G+ E ++E+F+ M++
Sbjct: 479 TIDMYAKSGCIKESRSVFDG--LKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQM 536
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ +L+ C HAG V++ L+ F M + G++PK EH+ C++D+LGR+GRLD+A
Sbjct: 537 PDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALR 596
Query: 309 LIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ E+PE P V+ SLL C ++G+ +A KL E+EP+N +V LSN+YAG GR
Sbjct: 597 LVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGR 656
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV R+RQMI D L K G S
Sbjct: 657 WDDVRRVRQMIKDIGLQKDAGCS 679
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 162/354 (45%), Gaps = 56/354 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N VT ++++ AC + L+ +++HG +++ Q D ++ V Y KCG L CA
Sbjct: 233 EVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAER 292
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +WN++I G +Q G
Sbjct: 293 VFYSME------------------------------------TKTVNSWNALIGGCAQNG 316
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A L+ +M +G+VP + S+L A A L +L+ GKE HG V+R L D +
Sbjct: 317 DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGI 376
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+S+Y+ CG+ S AR FD E K WNAMISGY +NG E A+ +F + +
Sbjct: 377 SLLSLYIHCGESSSARLLFDGMEEKS--SVSWNAMISGYSQNGLPEDALILFRKLVSDGF 434
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFT----MMDDDFGLKPKQEHFGC-MVDLLGRS 300
+P+ + V+VL AC A + K + +M+D F C +D+ +S
Sbjct: 435 QPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF--------VACSTIDMYAKS 486
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G + E+R + L ++ +++++ A H + GEE + M P
Sbjct: 487 GCIKESRSVFDGLKNKDLASWNAIIAAYGVHGD---GEESIELFERMRKVGQMP 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 117/256 (45%), Gaps = 39/256 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+ CA + +Q G ++HGL +K+ D + +LVDMY KCG L A +
Sbjct: 132 PDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQML 191
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + N R + +WN+MI G G
Sbjct: 192 FDK-------------------NNR-----------------KNAVSWNTMIGGLCTKGY 215
Query: 129 RFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
FEAF LF +MQ + + V ++L AC ++S L+ KE HG+ IR DE +A
Sbjct: 216 IFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVAN 275
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ Y KCG A R F E K + WNA+I G +NG+ A+ ++ M +
Sbjct: 276 GFVAAYAKCGMLICAERVFYSMETKTVNS--WNALIGGCAQNGDPRKALNLYIQMTYSGL 333
Query: 248 KPNSASFVAVLSACGH 263
P+ + ++L A H
Sbjct: 334 VPDWFTIGSLLLASAH 349
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 42/323 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
++ TF VI AC L G +HG+ +K+ D +G AL+ MY K G + A V
Sbjct: 29 ADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKV 88
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN+++W NS+ISGFS+ G
Sbjct: 89 FHYMP-VRNLVSW-----------------------------------NSIISGFSENGF 112
Query: 129 RFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ F + +M + G++P + + +VL CA +++G HG ++ L++D +
Sbjct: 113 SKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVN 172
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ-QE 245
+L+ MY KCG + A+ FD+ K + WN MI G G A +F MQ QE
Sbjct: 173 NSLVDMYSKCGYLTEAQMLFDKNNRK--NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQE 230
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++ N + + +L AC + ++L+ G + + V + G L
Sbjct: 231 DIEVNEVTVLNILPACLEISQL-RSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLIC 289
Query: 306 ARELIRELPEPTVSVYHSLLGAC 328
A + + TV+ +++L+G C
Sbjct: 290 AERVFYSMETKTVNSWNALIGGC 312
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + +SV+ AC+ L+ G++ H LK D + + +DMY K GC+ + +
Sbjct: 435 QPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRS 494
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF LK ++++ +WN +IA ++G E+++ELFE + G PD T+ +++ S G
Sbjct: 495 VFDGLK-NKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAG 553
Query: 128 MRFEAFKLFEKMQS-TGMVPSLK---CVTSVLSACADL-SALKLGKE 169
+ E K F +MQ+ G+ P L+ CV +L L AL+L E
Sbjct: 554 LVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHE 600
>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 865
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 218/384 (56%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T S++ ACA L L+ G+++HG ++ + + +ALV +Y KC + A
Sbjct: 262 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 321
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R++++WN ++ N EK LF ++ +G + D ATWN++I G + G
Sbjct: 322 VF-DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG 380
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F KMQ G P+ ++S+L AC+ L++GKE H +V R D + T
Sbjct: 381 RSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTT 440
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG + +R FD K D WN MI +G + A+ +FD M +V
Sbjct: 441 ALLYMYAKCGDLNLSRNVFDMMRRK--DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRV 498
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PNS +F VLS C H+ V++ +QIF M D ++P H+ C+VD+ R+GRL+EA
Sbjct: 499 QPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAY 558
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I+ +P EPT S + +LL AC + N +L + A KL E+EP NP +V L NI
Sbjct: 559 KFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAK 618
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W + ++R ++ +R +TK PG S
Sbjct: 619 MWSEASQVRILMKERGITKTPGCS 642
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 39/280 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F++ ACA ++VH + SD +G AL+ Y KC C+ A
Sbjct: 161 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 220
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R++++W ++ + + G K M++F + G KP+P T
Sbjct: 221 VFDDLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMT------------ 267
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+S+L ACA+L LK GKE HG +R + + + +
Sbjct: 268 -----------------------VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 304
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S+Y KC AR FD + D WN +++ Y +N EYE +F M ++ V
Sbjct: 305 ALVSLYAKCLSVREARMVFDLMPHR--DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGV 362
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ + A++ AV+ C G ++A+++F M G KP +
Sbjct: 363 RADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFKPNE 401
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 15/259 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G +A +LF+ + +PDP T +++IS + G+ EA K++ +Q G+ P +
Sbjct: 112 GDFNRARQLFDNIP----QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVF 167
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+ ACA KE H R + D + ALI Y KC ARR FD +
Sbjct: 168 LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVV 227
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ D W ++ S Y + G +++F M VKPN + ++L AC +
Sbjct: 228 R--DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGK 285
Query: 272 QIFTMMDDDFGLKPKQ--EHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+I F ++ F C +V L + + EAR + +P V ++ +L A
Sbjct: 286 EI-----HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTA 340
Query: 328 CWCHLNSDLGEEMAMKLQE 346
+ + + G + +K+
Sbjct: 341 YFKNKEYEKGFSLFLKMSR 359
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 209/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T S++ AC+ + LQ G+ +HG ++ ++D + ++L+D+Y KCG + A NV
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ + K + +WN MISG+ ++G
Sbjct: 366 FQNMP------------------------------------KTNVVSWNVMISGYVKVGS 389
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M+ G+ P TSVL AC+ L+ L+ GKE H +I + L +E + A
Sbjct: 390 YLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGA 449
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A F+Q + D W +MI+ YG +G+ A+++F+ MQQ K
Sbjct: 450 LLDMYAKCGAVDEALHIFNQ--LPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAK 507
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+A+LSAC HAG VD+ F M ++G KP EH+ C++DLLGR GRL EA E
Sbjct: 508 PDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYE 567
Query: 309 LIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+++ P+ V + +L AC H DLGE++ L E +P++P+ ++ILSN+YA +
Sbjct: 568 ILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVK 627
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++R I + L K PG S
Sbjct: 628 KWDEVRKVRLKIKELGLKKNPGCS 651
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 159/323 (49%), Gaps = 49/323 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T+ SV+ AC+ L + +G+ VH +K D ++ ++ V MY KC N
Sbjct: 103 KPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKC-------N 155
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E A++LF+ + D A+WN++IS + Q G
Sbjct: 156 VF-------------------------EDAIKLFDEMPER----DVASWNNVISCYYQDG 186
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +LFE+M+ +G P +T+V+S+CA L L+ GKE H ++R+ D +++
Sbjct: 187 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 246
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A+ F+Q I+ + WN+MI+GY G+ +S +E+F M +E +
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQ--IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGI 304
Query: 248 KPNSASFVAVLSACGHA-----GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P + ++L AC + G I ++ D + ++DL + G
Sbjct: 305 RPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS------LIDLYFKCGN 358
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+ A + + +P+ V ++ ++
Sbjct: 359 IGSAENVFQNMPKTNVVSWNVMI 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 126/247 (51%), Gaps = 9/247 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+++TF SV+ AC+ L L+ G+++H ++ + + + ++ AL+DMY KCG + A +
Sbjct: 406 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALH 465
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L R+ ++W +MIA +G++ +A++LFE + KPD T+ +++S S G
Sbjct: 466 IFNQLP-ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAG 524
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F +M G P+++ + ++ + L+ E D+ +D +
Sbjct: 525 LVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRT--PDIREDVGLL 582
Query: 187 TALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ L S ++ K R E PDDP+ + + + Y +++ ++ ++
Sbjct: 583 STLFSACHLHKKLDLGEQIGRLL--IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIK 640
Query: 244 QEKVKPN 250
+ +K N
Sbjct: 641 ELGLKKN 647
>gi|413924390|gb|AFW64322.1| hypothetical protein ZEAMMB73_176484 [Zea mays]
Length = 496
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 220/387 (56%), Gaps = 13/387 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L +H LK+ S ++ T L YL
Sbjct: 67 PNDVTLLTVLSACADSPSSPLASPLALTLHARALKLFP-SHLLLSTCLARFYLASRLPHL 125
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+++T+NTMI+G+M NG + A E+F+G+ PD +W ++I GF
Sbjct: 126 ALQLFDSMP-VRSVVTYNTMISGLMRNGLVDAAFEVFDGMP----GPDKVSWTALIDGFV 180
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M G+ + +V+SACA++ AL LG H V+R L ++
Sbjct: 181 KNGRHDEAIDCFRAMLLDGVETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVR 240
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ + A + F I+ WN+MI G+ NG A+E+F+ M++
Sbjct: 241 VANSLIDMYARCGQVNLAAQVFRS--IRKRTVVSWNSMIVGFAANGRCTDAIELFEEMRR 298
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ KP++ + VL+AC HAG + L+ + +M ++G+ + EH+GC+VDLLGR+GRLD
Sbjct: 299 QGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRLD 358
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H N D+ E+M L E++P+ +V+LSNIYA
Sbjct: 359 EAMHVVETMPMRPNEVVLGALLAGCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYA 418
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G+W+ G++R ++ R + K PG S
Sbjct: 419 AVGKWDGAGKVRSLMKARGVKKRPGHS 445
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 122/247 (49%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + +T ++V+SACA + L G VH L L+ + + + +L+DMY +CG + A
Sbjct: 201 ETDYITLVAVVSACAEVGALGLGMWVHRLVLRQRLERNVRVANSLIDMYARCGQVNLAAQ 260
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ R +++WN+MI G NGR A+ELFE + +GFKPD T +++ S G
Sbjct: 261 VFRSIR-KRTVVSWNSMIVGFAANGRCTDAIELFEEMRRQGFKPDAVTLTGVLTACSHAG 319
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA-DLNKD 182
+ + ++ M + G+ ++ CV +L L + HV+ + +
Sbjct: 320 LTEHGLRYYDLMTTEYGVAARMEHYGCVVDLLGRAGRL-------DEAMHVVETMPMRPN 372
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
E + AL++ G A + FE+ P A + + + Y G+++ A ++ L
Sbjct: 373 EVVLGALLAGCRTHGNLDMAEQMMQHLFELDPQGDANYVLLSNIYAAVGKWDGAGKVRSL 432
Query: 242 MQQEKVK 248
M+ VK
Sbjct: 433 MKARGVK 439
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 230/450 (51%), Gaps = 71/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VTF+S++ AC+ L+ GRQ+H +K +D + TAL+ MY KCG L A N
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARN 463
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF+ + +N++ WN MI + + + + A+ F+ L EG KPD +T+
Sbjct: 464 VFERI-SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPD 522
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEKM------------- 139
N+++S F G A LF M
Sbjct: 523 ALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 140 ------------------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q +G+ P T +L+ACA AL G+ H + A L+
Sbjct: 583 GFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDC 642
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + T LISMY KCG A F K + W +MI+GY ++G + A+E+F
Sbjct: 643 DVVVGTGLISMYTKCGSIDDAHLVFHNLPKK--NVYSWTSMITGYAQHGRGKEALELFCQ 700
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQQE VKP+ +FV LSAC HAG + + L F M DF ++P+ EH+GCMVDL GR+G
Sbjct: 701 MQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAG 759
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L EA E I ++ +P ++ +LLGAC HL+ +L E++A K E++P + +VILSN
Sbjct: 760 LLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSN 819
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G W++V ++R+++ DR + K PG S
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVVKKPGQS 849
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 184/383 (48%), Gaps = 52/383 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V F+S++ AC L+ G++VH ++ ++ +GTAL+ MY KCG + A
Sbjct: 303 QPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALE 362
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +KG RN+++W +MI+GF+Q G
Sbjct: 363 VFNLVKG-RNVVSWT-----------------------------------AMIAGFAQHG 386
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF F KM +G+ P+ S+L AC+ SALK G++ H +I+A D+ + T
Sbjct: 387 RMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRT 446
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+SMY KCG AR F++ I + WNAMI+ Y ++ +Y++AV F + +E +
Sbjct: 447 ALLSMYAKCGSLMDARNVFER--ISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504
Query: 248 KPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
KP+S++F ++L+ C G ++L I + D ++ +V + G
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIR------NALVSMFVNCGD 558
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSN 360
L A L ++PE + +++++ H + + +QE ++P+ T F L N
Sbjct: 559 LMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQIT-FTGLLN 617
Query: 361 IYAGLGRWEDVGRIRQMINDRQL 383
A + R+ +I + L
Sbjct: 618 ACASPEALTEGRRLHALITEAAL 640
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 164/368 (44%), Gaps = 47/368 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF+ +++ACA + G ++ L L +D +GTAL++M++KCG + A
Sbjct: 202 KPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALK 261
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D TW SMI+G ++
Sbjct: 262 VFNNLP------------------------------------RRDLITWTSMITGLARHR 285
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF+ M+ G+ P S+L AC AL+ GK H + L+ + + T
Sbjct: 286 QFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGT 345
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+SMY KCG A F+ +K + W AMI+G+ ++G E A F+ M + +
Sbjct: 346 ALLSMYTKCGSMEDALEVFNL--VKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGI 403
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+++L AC + + QI + G ++ + + G L +AR
Sbjct: 404 EPNRVTFMSILGACSRPSALKQGRQIHDRIIKA-GYITDDRVRTALLSMYAKCGSLMDAR 462
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTPFVILSNIYAG- 364
+ + + V +++++ A H D + A+ + ++P++ T F + N+
Sbjct: 463 NVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSST-FTSILNVCKSP 521
Query: 365 ----LGRW 368
LG+W
Sbjct: 522 DALELGKW 529
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 138/297 (46%), Gaps = 39/297 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ S++ C L G ++H + Q D + L+ MY KCG A +F E+
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+++ +WN ++ G + + R E+A L E + +G KPD T+ M
Sbjct: 166 P-DKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYM------------- 211
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
L+ACAD + G E ++ A + D + TALI+M
Sbjct: 212 ----------------------LNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINM 249
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG A + F+ + D W +MI+G R+ +++ A +F +M++E V+P+
Sbjct: 250 HIKCGGVDDALKVFNNLPRR--DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKV 307
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+FV++L AC H +++ ++ M + GL + ++ + + G +++A E+
Sbjct: 308 AFVSLLKACNHPEALEQGKRVHARM-KEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 15/215 (6%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N+ ++ S+ G EA + + S + + +S+L C L G+ H H+
Sbjct: 73 NAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKF 132
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESA 235
+ + D M LISMY KCG + A++ FD+ PD + WN ++ GY ++ YE A
Sbjct: 133 SKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM---PDKDVYSWNLLLGGYVQHRRYEEA 189
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----DDDFGLKPKQEHF 290
+ + M Q+ VKP+ +FV +L+AC A +VDK ++F+++ D D +
Sbjct: 190 FRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT----- 244
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++++ + G +D+A ++ LP + + S++
Sbjct: 245 -ALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI 278
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 231/391 (59%), Gaps = 8/391 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M L +PN++T +SV+ ACA L FG +VH + + + D + A++ +Y KCG
Sbjct: 200 MLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCG 259
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A +F+E+ ++ +T+ +MI+G M++G +AM+LF E +P TWN++I
Sbjct: 260 SLDYARELFEEML-EKDAITYCSMISGYMVHGFVNQAMDLFR----EQERPRLPTWNAVI 314
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG Q + A +F MQS G P+ + S+L + S LK GKE HG+ IR +
Sbjct: 315 SGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYD 374
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ +ATA+I Y KCG A+ FDQ IK W ++IS Y +G+ A+ +F
Sbjct: 375 RNIYVATAIIDSYAKCGYLHGAQLVFDQ--IKGRSLIAWTSIISAYAVHGDANVALSLFY 432
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M ++P+ +F +VL+AC H+G +D+A +IF ++ ++G++P EH+ CMV +L R+
Sbjct: 433 EMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRA 492
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G+L +A E I ++P EPT V+ +LL + +LG+ + +L E+EPEN +VI++
Sbjct: 493 GKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMA 552
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+Y+ GRW+D IR ++ + +L K+PG S
Sbjct: 553 NLYSQSGRWKDADTIRDLMKEVRLKKIPGNS 583
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 156/354 (44%), Gaps = 40/354 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +I C L+ + G+Q+H + D +G+ L+ Y K G + A+NVF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ +NI +WN ++ L+ ++LF L +
Sbjct: 62 GKIP-RKNIFSWNALLISYTLHNMHTDLLKLFSSLVNS---------------------- 98
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADL-SALKLGKETHGHVIRADLNKDESMATA 188
ST + P VT L A A L S L KE H ++R L D + A
Sbjct: 99 ----------NSTDVKPDRFTVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNA 148
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KV 247
LI+ Y +C + AR FD+ + D WNAM++GY + G YE E+F +M +V
Sbjct: 149 LITFYSRCDELVLARIMFDR--MPERDIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEV 206
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ + V+VL AC + + +++ +++ +K + ++ L + G LD AR
Sbjct: 207 KPNALTAVSVLQACAQSNDLIFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGSLDYAR 265
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EL E+ E Y S++ H + + M + ++ P PT ++S +
Sbjct: 266 ELFEEMLEKDAITYCSMISGYMVH--GFVNQAMDLFREQERPRLPTWNAVISGL 317
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 218/382 (57%), Gaps = 9/382 (2%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT + V+SACA + L+FGRQV + + + A++DMY KCG + A +F
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
++ N+ TW TM+ G ++ E A E+ + + D WN++IS + Q G E
Sbjct: 293 MEEKDNV-TWTTMLDGYAISEDYEAAREVLNSMPQK----DIVAWNALISAYEQNGKPNE 347
Query: 132 AFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A +F ++Q M + + S LSACA + AL+LG+ H ++ + + + + +ALI
Sbjct: 348 ALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALI 407
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY KCG +R F+ E + D W+AMI G +G AV++F MQ+ VKPN
Sbjct: 408 HMYSKCGDLEKSREVFNSVEKR--DVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPN 465
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F V AC H G VD+A +F M+ ++G+ P+++H+ C+VD+LGRSG L++A + I
Sbjct: 466 GVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFI 525
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
+P P+ SV+ +LLGAC H N +L E +L E+EP N V+LSNIYA LG+WE
Sbjct: 526 EAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWE 585
Query: 370 DVGRIRQMINDRQLTKLPGISA 391
+V +R+ + L K PG S+
Sbjct: 586 NVSELRKHMRVTGLKKEPGCSS 607
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 165/368 (44%), Gaps = 67/368 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +I A A + L G+ +HG+ +K SD + +L+ Y CG L A V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K +++++WN+MI G + G +KA+ELF
Sbjct: 189 FTTIK-EKDVVSWNSMINGFVQKGSPDKALELF--------------------------- 220
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+KM+S + S + VLSACA + L+ G++ ++ +N + ++A A
Sbjct: 221 --------KKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-----------------------------DPAFW 219
++ MY KCG A+R FD E K + D W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 220 NAMISGYGRNGEYESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
NA+IS Y +NG+ A+ +F +Q Q+ +K N + V+ LSAC G ++ I + +
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
G++ ++ + + G L+++RE+ + + V V+ +++G H +
Sbjct: 393 KH-GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAV 451
Query: 339 EMAMKLQE 346
+M K+QE
Sbjct: 452 DMFYKMQE 459
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 110/272 (40%), Gaps = 53/272 (19%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS--WARRFFDQFE 210
S++ C L LK +THGH+IR D A+ L +M S +AR+ FD+
Sbjct: 35 SLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASF--------------- 254
KP+ A WN +I Y + ++ F D++ + + PN +F
Sbjct: 92 -KPNSFA-WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 255 ------VAVLSACG--------------HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+AV SA G G +D A ++FT + + + + M+
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS-----WNSMI 204
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYH----SLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+ + G D+A EL +++ V H +L AC N + G ++ ++E
Sbjct: 205 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 351 -NPTPFVILSNIYAGLGRWEDVGRIRQMINDR 381
N T + ++Y G ED R+ + ++
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 218/384 (56%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T S++ ACA L L+ G+++HG ++ + + +ALV +Y KC + A
Sbjct: 176 KPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARM 235
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R++++WN ++ N EK LF ++ +G + D ATWN++I G + G
Sbjct: 236 VF-DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENG 294
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F KMQ G P+ ++S+L AC+ L++GKE H +V R D + T
Sbjct: 295 RSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTT 354
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG + +R FD K D WN MI +G + A+ +FD M +V
Sbjct: 355 ALLYMYAKCGDLNLSRNVFDMMRRK--DVVAWNTMIIANAMHGNGKEALFLFDKMLLSRV 412
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PNS +F VLS C H+ V++ +QIF M D ++P H+ C+VD+ R+GRL+EA
Sbjct: 413 QPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAY 472
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I+ +P EPT S + +LL AC + N +L + A KL E+EP NP +V L NI
Sbjct: 473 KFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTAK 532
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W + ++R ++ +R +TK PG S
Sbjct: 533 MWSEASQVRILMKERGITKTPGCS 556
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 39/280 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F++ ACA ++VH + SD +G AL+ Y KC C+ A
Sbjct: 75 KPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARR 134
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R++++W ++ + + G K M++F + G KP+P T
Sbjct: 135 VFDDLV-VRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMT------------ 181
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+S+L ACA+L LK GKE HG +R + + + +
Sbjct: 182 -----------------------VSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCS 218
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S+Y KC AR FD + D WN +++ Y +N EYE +F M ++ V
Sbjct: 219 ALVSLYAKCLSVREARMVFDLMPHR--DVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGV 276
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ + A++ AV+ C G ++A+++F M G KP +
Sbjct: 277 RADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFKPNE 315
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 17/260 (6%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G +A +LF+ + +PDP T +++IS + G+ EA K++ +Q G+ P +
Sbjct: 26 GDFNRARQLFDNIP----QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVF 81
Query: 152 TSVLSACA-DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ ACA AL++ KE H R + D + ALI Y KC ARR FD
Sbjct: 82 LAAAKACAVSGDALRV-KEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLV 140
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
++ D W ++ S Y + G +++F M VKPN + ++L AC +
Sbjct: 141 VR--DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSG 198
Query: 271 LQIFTMMDDDFGLKPKQ--EHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+I F ++ F C +V L + + EAR + +P V ++ +L
Sbjct: 199 KEI-----HGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLT 253
Query: 327 ACWCHLNSDLGEEMAMKLQE 346
A + + + G + +K+
Sbjct: 254 AYFKNKEYEKGFSLFLKMSR 273
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 208/385 (54%), Gaps = 43/385 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF SV+ ACAS + L G+Q+H LK S+ + A++D+Y KCG
Sbjct: 336 PNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCG-------- 387
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD--PATWNSMISGFSQL 126
E +M+LFE L PD TWN++I G+ QL
Sbjct: 388 ------------------------EIENSMKLFEEL------PDRNDVTWNTIIVGYVQL 417
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G A LF M M P+ +SVL A A L+AL+ G + H I+ NKD +A
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA 477
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG+ + AR FD+ + D WNAMI GY +G A+ +FD+MQ
Sbjct: 478 NSLIDMYAKCGRINDARLTFDKMNKR--DEVSWNAMICGYSMHGMSMEALNLFDMMQHTD 535
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPN +FV VLSAC +AG + K F M D+ +KP EH+ CMV LLGR GR DEA
Sbjct: 536 CKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEA 595
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI E+ +P+V V+ +LLGAC H DLG A + EMEP + V+LSN+YA
Sbjct: 596 MKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATA 655
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW++V +R+ + +++ K PG+S
Sbjct: 656 GRWDNVAFVRKYMQKKKVRKEPGLS 680
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 140/305 (45%), Gaps = 49/305 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T + +C L G+ VHG LK D +G AL+++Y K G + A
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ K D W+ MI+ ++Q
Sbjct: 294 LFEEMP------------------------------------KTDLIPWSLMIARYAQSD 317
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M+ T +VP+ SVL ACA +L LGK+ H V++ LN + ++
Sbjct: 318 RSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSN 377
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ +Y KCG+ + + F++ + D WN +I GY + G+ E A+ +F M + +
Sbjct: 378 AIMDVYAKCGEIENSMKLFEELPDRND--VTWNTIIVGYVQLGDGERAMNLFTHMLEHDM 435
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P ++ +VL A ++ LQI TM + D + ++D+ + GR
Sbjct: 436 QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA------NSLIDMYAKCGR 489
Query: 303 LDEAR 307
+++AR
Sbjct: 490 INDAR 494
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N F +++ S+ +H K+ +D +GTAL+D Y G + A +
Sbjct: 133 EVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARH 192
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +W M++ +++
Sbjct: 193 VFDDICC------------------------------------KDMVSWTGMVACYAENC 216
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +LF +M+ G P+ ++ L +C L A +GK HG ++ + D +
Sbjct: 217 FYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGI 276
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y K G+ A+R F+ E+ D W+ MI+ Y ++ + A+++F M+Q V
Sbjct: 277 ALLELYAKSGEIIDAQRLFE--EMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSV 334
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +F +VL AC + +D QI + + FGL ++D+ + G ++ +
Sbjct: 335 VPNNFTFASVLQACASSVSLDLGKQIHSCV-LKFGLNSNVFVSNAIMDVYAKCGEIENSM 393
Query: 308 ELIRELPEPTVSVYHSLL 325
+L ELP+ +++++
Sbjct: 394 KLFEELPDRNDVTWNTII 411
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 117/248 (47%), Gaps = 38/248 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT+ SV+ A ASL L+ G Q+H LT+K DT++ +L+DMY KCG + A
Sbjct: 436 QPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARL 495
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ R+ ++WN MI G ++G S +A+ LF+ + H KP+ T+ ++S S G
Sbjct: 496 TFDKM-NKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAG 554
Query: 128 MRFEAFKLFEKM-----------QSTGMV----------------------PSLKCVTSV 154
+ ++ FE M T MV PS+ ++
Sbjct: 555 LLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRAL 614
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ---PSWARRFFDQFEI 211
L AC + LG+ HV+ + + D++ L +MY G+ ++ R++ + ++
Sbjct: 615 LGACVIHKKVDLGRVCAQHVLEMEPH-DDATHVLLSNMYATAGRWDNVAFVRKYMQKKKV 673
Query: 212 KPDDPAFW 219
+ + W
Sbjct: 674 RKEPGLSW 681
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 117/296 (39%), Gaps = 59/296 (19%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+ +H LK D L++ Y++ L A +F E+ + N +++ T+ G
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQT-NTISFVTLAQGYS 112
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+ + +A+ + EG + +P + +++ KL M +
Sbjct: 113 RDHQFHQALHFILRIFKEGHEVNPFVFTTLL-------------KLLVSMDLAHL----- 154
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C T L AC KLG D + TALI Y G AR FD
Sbjct: 155 CWT--LHACV----YKLGHHA-----------DAFVGTALIDAYSVRGNVDVARHVFD-- 195
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+I D W M++ Y N YE ++++F+ M+ KPN+ + L +C
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSC-------L 248
Query: 270 ALQIFTMMDDDFGLKPKQEHFGC----------MVDLLGRSGRLDEARELIRELPE 315
L+ F + G K GC +++L +SG + +A+ L E+P+
Sbjct: 249 GLEAFNVGKSVHGCALK----GCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPK 300
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 219/392 (55%), Gaps = 43/392 (10%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+++C+ +PN+VT SV+ CAS+ L G+Q+HG L+ + + +AL+DMY KCG
Sbjct: 436 LEQCI--KPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCG 493
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L +H +F ++ + D TWNSMI
Sbjct: 494 RLDLSHYIFLKMS------------------------------------QKDEVTWNSMI 517
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
S FSQ G EA LF +M G+ + +++ LSACA L A+ GKE HG I+ +
Sbjct: 518 SSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIK 577
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF 239
D +ALI MY KCG A R F E PD + WN++IS YG +G + +V +
Sbjct: 578 ADIFAESALIDMYAKCGNLELALRVF---EFMPDKNEVSWNSIISAYGAHGLVKESVSLL 634
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+E KP+ +F+A++SAC HAG V++ +Q+F M + + P+ EHF CMVDL R
Sbjct: 635 HGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSR 694
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
SG+LD+A + I ++P +P ++ +LL AC H N +L + + +L +++P N +V++
Sbjct: 695 SGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGYYVLM 754
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SNI A GRW+ V ++R+++ D ++ K+PG S
Sbjct: 755 SNINAVAGRWDGVSKVRRLMKDNKILKIPGYS 786
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 149/321 (46%), Gaps = 41/321 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T +S CA+ L G Q+H L +K + + + L+ MY KC CL
Sbjct: 239 EPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCL----- 293
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A LFE + + D TWN MISG Q G
Sbjct: 294 ---------------------------DDAWRLFELMPQD----DLVTWNGMISGCVQNG 322
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF LF MQ +G P + S+L A DL+ LK GKE HG+++R +N D + +
Sbjct: 323 LFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVS 382
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KC A+ +D + D + MISGY NG E A+++F + ++ +
Sbjct: 383 ALVDIYFKCRDVRMAQNLYD--AARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCI 440
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPN+ + +VL C + QI ++ + + K E ++D+ + GRLD +
Sbjct: 441 KPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVE--SALMDMYAKCGRLDLS 498
Query: 307 RELIRELPEPTVSVYHSLLGA 327
+ ++ + ++S++ +
Sbjct: 499 HYIFLKMSQKDEVTWNSMISS 519
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T V+ +CA+L + GR VH I +D +G+ALV MY
Sbjct: 138 SPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYAD--------- 188
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
AG++ N R + F+G+ D WN M+ G + G
Sbjct: 189 ------------------AGLLGNAR-----DAFDGIPER----DCVLWNVMMDGCIKAG 221
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF M+++G P+ + LS CA + L G + H ++ L + ++A
Sbjct: 222 DVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVAN 281
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L++MY KC A R FE+ P DD WN MISG +NG + A +F MQ+
Sbjct: 282 TLLAMYAKCQCLDDAWRL---FELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSG 338
Query: 247 VKPNSASFVAVLSA 260
+P+S + V++L A
Sbjct: 339 ARPDSITLVSLLPA 352
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 37/327 (11%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
++D ++ ++V+ C S +L G Q+H + ++ AL D
Sbjct: 26 VTDVSSADRLLAVLRGCVSAPHLPLGLQIH---------ARAVVSGALSD---------- 66
Query: 65 AHNVFQELKGSRNILTWNTMIAGM-MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
N L +T + GM +L R A+ +F L WN +I GF
Sbjct: 67 -----------HNHLALHTRLLGMYVLARRFRDAVAVFSALPRAA-AASSLPWNWLIRGF 114
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNK 181
+ G A + KM S PS T V+ +CA L A+ LG+ H L
Sbjct: 115 TAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLAN 174
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + +AL+ MY G AR FD I D WN M+ G + G+ + AV +F
Sbjct: 175 DVYVGSALVKMYADAGLLGNARDAFDG--IPERDCVLWNVMMDGCIKAGDVDGAVRLFRN 232
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ +PN A+ LS C + Q+ ++ GL+P+ ++ + +
Sbjct: 233 MRASGCEPNFATLACFLSVCATDADLLSGAQLHSLA-VKCGLEPEVAVANTLLAMYAKCQ 291
Query: 302 RLDEARELIRELPEPTVSVYHSLLGAC 328
LD+A L +P+ + ++ ++ C
Sbjct: 292 CLDDAWRLFELMPQDDLVTWNGMISGC 318
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 225/383 (58%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF ++ ACA L L FG +H +++ ++ + L+ +Y C C+ A +
Sbjct: 86 PNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRL 145
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +R+++TW +I G +G+ A +LF+ + + + +W++MI+G++Q+G+
Sbjct: 146 FDG-SVNRDVVTWTAVINGYAKSGQVVVARQLFDEMP----EKNAVSWSAMITGYAQIGL 200
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ G P+ + L+ACA L AL G+ H +V R + D + TA
Sbjct: 201 FREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA 260
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A R FD E+ D + ++ISG +G +A+E+F MQ E V
Sbjct: 261 LIDMYAKCGCVETACRVFD--EMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVC 318
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +LSAC G V++ L+IF M + +G++P +H+GC+VDLLGR+G L++A+
Sbjct: 319 PNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKR 378
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++RE+P EP V +LL AC H + +LG+E L E ++ V+LSN+YA +
Sbjct: 379 VVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQ 438
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV ++R+ + ++++ K+PG S
Sbjct: 439 WEDVAKVRKGMEEKKVKKVPGCS 461
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 9/306 (2%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R WNTM+ + L++ + GF P+ T++ ++ +QL +F +
Sbjct: 51 RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDL--SFGI 108
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
Q+ + + V + L A ++ + +N+D TA+I+ Y K
Sbjct: 109 LLHAQAVRL--GWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAK 166
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
GQ AR+ FD E+ + W+AMI+GY + G + A+E+F+ MQ +PN + V
Sbjct: 167 SGQVVVARQLFD--EMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIV 224
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
L+AC G +D+ I +D + + + ++D+ + G ++ A + E+ +
Sbjct: 225 GALTACAFLGALDQGRWIHAYVDRNRMVLDRILG-TALIDMYAKCGCVETACRVFDEMLD 283
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQ-EMEPENPTPFVILSNIYAGLGRWEDVGRI 374
V + SL+ H +S EM ++Q E N F+ L + + +G E+ RI
Sbjct: 284 RDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRI 343
Query: 375 -RQMIN 379
+ M N
Sbjct: 344 FKSMTN 349
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 225/383 (58%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF ++ ACA L L FG +H +++ ++ + L+ +Y C C+ A +
Sbjct: 111 PNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRL 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +R+++TW +I G +G+ A +LF+ + + + +W++MI+G++Q+G+
Sbjct: 171 FDG-SVNRDVVTWTAVINGYAKSGQVVVARQLFDEMP----EKNAVSWSAMITGYAQIGL 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ G P+ + L+ACA L AL G+ H +V R + D + TA
Sbjct: 226 FREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A R FD E+ D + ++ISG +G +A+E+F MQ E V
Sbjct: 286 LIDMYAKCGCVETACRVFD--EMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVC 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +LSAC G V++ L+IF M + +G++P +H+GC+VDLLGR+G L++A+
Sbjct: 344 PNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKR 403
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++RE+P EP V +LL AC H + +LG+E L E ++ V+LSN+YA +
Sbjct: 404 VVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQ 463
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV ++R+ + ++++ K+PG S
Sbjct: 464 WEDVAKVRKGMEEKKVKKVPGCS 486
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 138/306 (45%), Gaps = 9/306 (2%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R WNTM+ + L++ + GF P+ T++ ++ +QL +F +
Sbjct: 76 RTSFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDL--SFGI 133
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
Q+ + + V + L A ++ + +N+D TA+I+ Y K
Sbjct: 134 LLHAQAVRL--GWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAK 191
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
GQ AR+ FD E+ + W+AMI+GY + G + A+E+F+ MQ +PN + V
Sbjct: 192 SGQVVVARQLFD--EMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIV 249
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
L+AC G +D+ I +D + + + ++D+ + G ++ A + E+ +
Sbjct: 250 GALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTA-LIDMYAKCGCVETACRVFDEMLD 308
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQ-EMEPENPTPFVILSNIYAGLGRWEDVGRI 374
V + SL+ H +S EM ++Q E N F+ L + + +G E+ RI
Sbjct: 309 RDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRI 368
Query: 375 -RQMIN 379
+ M N
Sbjct: 369 FKSMTN 374
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/421 (34%), Positives = 228/421 (54%), Gaps = 36/421 (8%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ L+ +S +F ++ A AS L+ G Q+H + + +GT LV MY +CG
Sbjct: 96 MRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECG 155
Query: 61 CLPCAHNVFQEL---------------------KGS---------RNILTWNTMIAGMML 90
+ A VF+E+ KG+ RN+ +WN M+AG
Sbjct: 156 FVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTK 215
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
G E A +LF + D +W++MI GF+ G +EAF F ++Q GM P+
Sbjct: 216 AGELELARKLFLEMP----VKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVS 271
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+T LSACAD A++ GK HG + ++ S+ AL+ Y KCG AR F++
Sbjct: 272 LTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMP 331
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
K + W +MI+G +G E A+++F M++ ++P+ +F+++L AC HAG ++K
Sbjct: 332 EKRSIVS-WTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKG 390
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGACW 329
+ F M D + ++P EH+GCMVDL GR+G+LD+A E I +P PT ++ +LLGAC
Sbjct: 391 YEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACS 450
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
H N L E + +L E++P N V+LSNIYA G+W+DV +R+ + D+++ K PG
Sbjct: 451 IHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGW 510
Query: 390 S 390
S
Sbjct: 511 S 511
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 216/383 (56%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +VT + V+SAC+ L L+ G++VH + +S+ ++ A++DMY CG + A +
Sbjct: 217 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGI 276
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + +R+I++W T+++G G + A F+ + + D +W +MI G+ +
Sbjct: 277 FRSM-NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK----DYVSWTAMIDGYIRSNR 331
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ+T + P + SVL+ACA L AL+LG+ ++ R + D + A
Sbjct: 332 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 391
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F E+ D W AMI G NG E A+++F M + +
Sbjct: 392 LIDMYFKCGDVDKAESIFR--EMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 449
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ VLSAC H G VDK + F M G++P H+GC+VDLL R+GRL EA E
Sbjct: 450 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 509
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P S V+ +LL C + SD+ E + ++ E+EP+N +V+L NIYA R
Sbjct: 510 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKR 569
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D+ +RQM+ D+ + K PG S
Sbjct: 570 WNDLRELRQMMMDKGIKKTPGCS 592
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 74/341 (21%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF + + L++GRQ+HG LK Q + + TALV MYL CG L A
Sbjct: 115 KPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARG 174
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +++TWN +I S ++++G
Sbjct: 175 VF-DVCPKADVITWNMII-----------------------------------SAYNKVG 198
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +LF M+ ++P+ + VLSAC+ L L+ GK+ H +V + + +
Sbjct: 199 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 258
Query: 188 ALISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDP 216
A+I MY CG+ SW AR +FD+ K D
Sbjct: 259 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK--DY 316
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY R+ ++ A+E+F MQ VKP+ + V+VL+AC H G ++ I T
Sbjct: 317 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 376
Query: 277 MDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPE 315
+D + K K + F ++D+ + G +D+A + RE+ +
Sbjct: 377 IDRN---KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ 414
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC----GC 61
S P + IS++ C S+ LQ QVH +K ++ ++ + M C G
Sbjct: 13 SFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRV--MTFCCTHEYGD 67
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A +F E+ N+ WNTMI G + + L+ + G KPD T+ +
Sbjct: 68 FQYARRLFDEIPEP-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 126
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
GF++ D+ AL+ G++ HGHV++ L
Sbjct: 127 GFTR----------------------------------DI-ALEYGRQLHGHVLKHGLQY 151
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFD 240
+ + TAL+ MY+ CGQ AR FD + P D WN +IS Y + G++E + +F
Sbjct: 152 NVFVHTALVQMYLLCGQLDTARGVFD---VCPKADVITWNMIISAYNKVGKFEESRRLFL 208
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+M+ ++V P + + V VLSAC + ++ + + + ++ M+D+
Sbjct: 209 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNLVLENAMIDMYADC 267
Query: 301 GRLDEARELIREL 313
G +D A + R +
Sbjct: 268 GEMDSALGIFRSM 280
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +SV++ACA L L+ G + + + ++D + AL+DMY KCG + A +
Sbjct: 348 KPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 407
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ R+ TW MI G+ +NG EKA+++F + PD T+ ++S + G
Sbjct: 408 IFREM-SQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 466
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + K F +M S G+ P++ C+ +L+ L KE + + + +
Sbjct: 467 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL------KEAYEVIENMPIKANS 520
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ + A Q E++PD+ A + + + Y + E+ +M
Sbjct: 521 IVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMM 580
Query: 243 QQEKVK 248
+ +K
Sbjct: 581 MDKGIK 586
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 221/391 (56%), Gaps = 9/391 (2%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCG 60
K+C PNSVT + ++SAC+ L L G+ ++ +K + + ++ AL+DM+ CG
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG 289
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF E+K +R++++W +++ G R + A + F+ + D +W +MI
Sbjct: 290 EMDAARGVFDEMK-TRDVISWTSIVTGFANTCRIDLARKYFDQMPER----DYVSWTAMI 344
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ ++ E LF MQ + + P + S+L+ACA L AL+LG+ ++ + +
Sbjct: 345 DGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIK 404
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + ALI MY KCG A++ F+ E++ D W AMI G NG E A+ +F
Sbjct: 405 NDTFIGNALIDMYFKCGNVEKAKKIFN--EMQKKDKFTWTAMIVGLANNGHGEEALTMFS 462
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + V P+ +++ V+ AC H G V K F+ M G+KP H+GCMVDLLGR+
Sbjct: 463 YMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRA 522
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L EA E+I +P +P V+ SLLGAC H N L E A ++ E+EPEN +V+L
Sbjct: 523 GHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLC 582
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYA +W+++ +R+M+ +R + K+PG S
Sbjct: 583 NIYAACKKWKNLHNVRKMMMERGIKKIPGCS 613
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 150/362 (41%), Gaps = 49/362 (13%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL--KCGCLPCAHNVFQEL 72
IS++ C ++ + Q+H T+K S+ + T ++ + G + A VF E+
Sbjct: 39 ISLLETCNTMYEIN---QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEI 95
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ WNTMI G SE + L++ + KPD T+ ++ GF++
Sbjct: 96 P-QPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK------- 147
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH-VIRADLNKDESMATALIS 191
D+ ALK GK H VI L+ + + I
Sbjct: 148 ---------------------------DM-ALKYGKVLLNHAVIHGFLDSNLFVQKGFIH 179
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ--EKVKP 249
++ CG ++AR+ FD + + WN ++SGY R YE + +F M++ E V P
Sbjct: 180 LFSLCGLVNYARKIFDMGD--GWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSP 237
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS + V +LSAC + I+ + ++P ++D+ G +D AR +
Sbjct: 238 NSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGV 297
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
E+ V + S++ DL + +M + + + + Y + R++
Sbjct: 298 FDEMKTRDVISWTSIVTGFANTCRIDLARKY---FDQMPERDYVSWTAMIDGYLRMNRFK 354
Query: 370 DV 371
+V
Sbjct: 355 EV 356
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 132 AFKLFEK--MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ LF K + +T + +K S+L C + + + H I+ L+ + T +
Sbjct: 17 SLSLFLKRMISNTPLHSFVKSPISLLETCNTMYEIN---QIHSQTIKTGLSSNHLFLTKV 73
Query: 190 ISM--YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
I + G +AR+ FD EI WN MI GY R ES V ++ LM +
Sbjct: 74 IIFCCTKESGDVYYARKVFD--EIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNI 131
Query: 248 KPNSASF 254
KP+ +F
Sbjct: 132 KPDGFTF 138
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 217/383 (56%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P VT+I+V+SAC Y+ G QVH + D +G AL+DMY +C + A +
Sbjct: 121 PTPVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWEL 180
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ RN ++W ++I+G + G+ ++A LF+ + D +W +MI G+ Q G
Sbjct: 181 FEGME-VRNTVSWTSVISGFLRLGQVDQARTLFDCMPER----DTVSWTAMIDGYVQAGQ 235
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F +MQ + + + SV++ACA L AL+ G+ ++ R + D + A
Sbjct: 236 FREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNA 295
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A F + I+ D W A+I G NG E A+ +F M +
Sbjct: 296 LVDMYSKCGSIQQALGVFKEMYIR--DKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEA 353
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC HAG VDK F M +G+ P HFGC++DLLGR+G+L EA E
Sbjct: 354 PDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALE 413
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P P +++ +LL AC H NS++G+ A L E++ EN +++LSN+YA R
Sbjct: 414 TIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNR 473
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV R+RQ+I ++ + K PG S
Sbjct: 474 WEDVRRLRQVIMEKGIKKEPGCS 496
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 142/310 (45%), Gaps = 12/310 (3%)
Query: 8 EPNSVTFISVISAC-ASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
P++ TF ++ A A+ G VH +K + + + ++LV MY G A
Sbjct: 15 RPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVLMYAARGDGAVAR 74
Query: 67 NVFQE--LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ +G + WN +I+G + + + F + G P P T+ +++S
Sbjct: 75 TLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACG 134
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET-HGHVIRADLNKDE 183
+ + ++ + + ++G++P LK +++ A+ S + E G +R ++
Sbjct: 135 KDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVS--- 191
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
T++IS +++ GQ AR FD + D W AMI GY + G++ A+E+F MQ
Sbjct: 192 --WTSVISGFLRLGQVDQARTLFDC--MPERDTVSWTAMIDGYVQAGQFREALEMFREMQ 247
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
KV+ + + V+V++AC G ++ M G+K +VD+ + G +
Sbjct: 248 FSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRH-GIKMDTFVGNALVDMYSKCGSI 306
Query: 304 DEARELIREL 313
+A + +E+
Sbjct: 307 QQALGVFKEM 316
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 224/418 (53%), Gaps = 37/418 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN S++ AC L + G +H + LK +SD I +AL+ MY KCG + A
Sbjct: 125 RPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACR 184
Query: 68 VF----------------------------------QELKGSRNILTWNTMIAGMMLNGR 93
VF Q+ N+++WNT+IAG G
Sbjct: 185 VFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGD 244
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
E+F + G +PD +W S+ISGF Q E F F++M G PS ++S
Sbjct: 245 KSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISS 304
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L AC +++ L+ GKE HG+ + + KD + +AL+ MY KCG S A+ F + +
Sbjct: 305 LLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF--YMMPE 362
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ WN++I GY +G A+E+F+ M++ K + +F AVL+AC HAG V+ +
Sbjct: 363 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 422
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHL 332
F M + + ++P+ EH+ CMVDLLGR+G+L EA +LI+ +P EP V+ +LLGAC H
Sbjct: 423 FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 482
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N +L E A L E+EPE+P ++LSN+YA GRW + ++++M+ R+ K PG S
Sbjct: 483 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCS 540
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 139/337 (41%), Gaps = 43/337 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +S T+ I A L GR +H + I T L+ Y +CG L A
Sbjct: 24 QSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARK 83
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + NI W ++L G A GF
Sbjct: 84 LFDKIPNT-NIRRW------IVLTG----------ACARRGFYE---------------- 110
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F +MQ G+ P+ + S+L AC LS + G+ H +++ D + +
Sbjct: 111 ---EALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIIS 167
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A R FD I D NAM+SGY ++G A+ + MQQ V
Sbjct: 168 ALIYMYSKCGHVEKACRVFDW--IVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGV 225
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN S+ +++ G ++F +M + G++P + ++ ++ E
Sbjct: 226 KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFVQNFHNHEGF 284
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEM 340
+ +E+ + P+ SLL AC N G+E+
Sbjct: 285 DAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEI 321
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 227/382 (59%), Gaps = 12/382 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N VT+ +++S A + R++ ++ + + + TA++ Y G + A ++F
Sbjct: 209 NVVTWTAMVSGYARNGKVDVARKL----FEVMPERNEVSWTAMLLGYTHSGRMREASSLF 264
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + ++ N MI G LNG +KA +F+G+ D TW++MI + + G
Sbjct: 265 DAMP-VKPVVVCNEMIMGFGLNGEVDKARRVFKGMKER----DNGTWSAMIKVYERKGYE 319
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +MQ G+ + + SVLS C L++L GK+ H ++R++ ++D +A+ L
Sbjct: 320 LEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVL 379
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY+KCG A++ F++F +K D WN+MI+GY ++G E A+ +F M V P
Sbjct: 380 ITMYVKCGNLVRAKQVFNRFPLK--DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPP 437
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VLSAC ++G V + L++F M + ++P EH+ C+VDLLGR+ +++EA +L
Sbjct: 438 DDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKL 497
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++P EP V+ +LLGAC H+ DL E KL ++EP+N P+V+LSN+YA GRW
Sbjct: 498 VEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRW 557
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV +R+ I R +TKLPG S
Sbjct: 558 RDVEVLREKIKARSVTKLPGCS 579
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 61/300 (20%)
Query: 30 GRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAG 87
RQ L EK Q +T+ L+ ++K G L A VF + RN+++W +M+ G
Sbjct: 68 ARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMP-DRNVVSWTSMVRG 126
Query: 88 MMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
+ NG +A LF + H+ + +W M+ G Q G +A KLF+ M+P
Sbjct: 127 YVRNGDVAEAERLFWHMPHK----NVVSWTVMLGGLLQEGRVDDARKLFD------MMPE 176
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
KD T +I Y + G+ AR FD
Sbjct: 177 ---------------------------------KDVVAVTNMIGGYCEEGRLDEARALFD 203
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
E+ + W AM+SGY RNG+ + A ++F++M + N S+ A+L H+G +
Sbjct: 204 --EMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRM 257
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+A +F M P + C M+ G +G +D+AR + + + E + +++
Sbjct: 258 REASSLFDAM-------PVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMI 310
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 144/349 (41%), Gaps = 61/349 (17%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
T++V Y++ G + A +F + +N+++W M+ G++ GR + A +LF+ + +
Sbjct: 121 TSMVRGYVRNGDVAEAERLFWHMP-HKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEK-- 177
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +MI G+ + G EA LF++M +V T+++S A + + ++
Sbjct: 178 --DVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVV----TWTAMVSGYARNGKVDVARK 231
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP---------------- 213
+ ++E TA++ Y G+ A FD +KP
Sbjct: 232 ----LFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGE 287
Query: 214 -------------DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
D W+AMI Y R G A+ +F MQ+E + N S ++VLS
Sbjct: 288 VDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSV 347
Query: 261 CGHAGHVDKALQIFTMM-----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
C +D Q+ + D D + ++ + + G L A+++ P
Sbjct: 348 CVSLASLDHGKQVHAQLVRSEFDQDLYVA------SVLITMYVKCGNLVRAKQVFNRFPL 401
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
V +++S++ H LGEE +M P++ T +LS
Sbjct: 402 KDVVMWNSMITGYSQH---GLGEEALNVFHDMCSSGVPPDDVTFIGVLS 447
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 33/231 (14%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+ Y + GQ AR+ FD+ + + WNAM++ Y + A+ +F+ M Q
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR---- 84
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDD------------------------FGLKP 285
N+ S+ ++S G + +A ++F M D F P
Sbjct: 85 NTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMP 144
Query: 286 KQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
+ V L G + GR+D+AR+L +PE V +++G +C L E A+
Sbjct: 145 HKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGG-YCE-EGRLDEARAL- 201
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
EM N + + + YA G+ + ++ +++ +R + G T
Sbjct: 202 FDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYT 252
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 220/384 (57%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI +C +L + G QVHGL K + AL+DMY K G L A V
Sbjct: 109 PDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKV 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ R++++WN++I G + G+ A ELF+ + +W +MI+G+ ++G
Sbjct: 169 FEEM-SHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTI----VSWTTMITGYGRMGC 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F +MQ G+ P + +VL ACA L AL++GK H + + + + A
Sbjct: 224 YGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A FDQ K D W+ MI G +G+ A+++F+ M + +V
Sbjct: 284 LIEMYAKCGCIDEAWNLFDQLVEK--DVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVA 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL AC H G D+ L+ F +M + ++P+ EH+GC++DLLGRSG L +A +
Sbjct: 342 PNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALD 401
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P +P +++SLL +C H N + +L E+EPE +V+L+N+YA G+
Sbjct: 402 TISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGK 461
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WEDV IR++I ++++ K PG S+
Sbjct: 462 WEDVSNIRKLIRNKRIKKTPGSSS 485
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 23/310 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ I+V+ ACA L L+ G+ +H K T I AL++MY KCGC+ A N
Sbjct: 240 EPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWN 299
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L +++++W+TMI G+ +G+ +A++LFE + P+ T+ ++ S G
Sbjct: 300 LFDQLV-EKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTG 358
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E K F+ M ++ + P ++ ++ L +T + + + D +
Sbjct: 359 LWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDT---ISKMPIKPDSRIW 415
Query: 187 TALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+L+S A Q E++P++ + + + Y +G++E I L++ +
Sbjct: 416 NSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDVSNIRKLIRNK 475
Query: 246 KVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP-KQEHFGCMVDLLGRSGR 302
++K P S+S V+ +Q F DD KP QE F + L R
Sbjct: 476 RIKKTPGSSSI-----------EVNNVVQEFVSSDDS---KPFSQEVFWILEGLALNQTR 521
Query: 303 LDEARELIRE 312
++ E + E
Sbjct: 522 TNDLMEPVEE 531
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ +TS L C ++ LK + H HV++ L++ + T ++ G S+A F Q
Sbjct: 12 RYITS-LKNCFKITQLK---KIHAHVVKLSLSQSNFLVTKMLDSCDNLGHVSYATLLFKQ 67
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM---QQEKVKPNSASFVAVLSACGHAG 265
+ P+ + NA+I Y N + SA+ +F M V P+ +F V+ +C
Sbjct: 68 L-LHPNIFTY-NAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIKSCTGIL 125
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+Q+ ++ FG ++D+ + G L A ++ E+ V ++SL+
Sbjct: 126 CHRLGMQVHGLV-YKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLI 184
>gi|125541284|gb|EAY87679.1| hypothetical protein OsI_09093 [Oryza sativa Indica Group]
Length = 493
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/388 (36%), Positives = 218/388 (56%), Gaps = 13/388 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L + VH LK+ S ++ T LV Y
Sbjct: 65 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFP-SHLLLSTCLVRFYFASRLPHL 123
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+ +T+NT+I+G+M NG A E+F+G+ PD +W ++I G
Sbjct: 124 ALQLFDAMP-VRSAVTYNTVISGLMRNGLVAAAFEVFDGMP----APDKVSWTALIDGCV 178
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M G+ P + +V+SACA++ AL LG H V+R L ++
Sbjct: 179 KNGRHDEAINCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVR 238
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ AR+ F ++ WN+MI G+ NG AVE F+ M++
Sbjct: 239 IANSLIDMYARCGQVELARQVFSG--MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 296
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F VL+AC H G D+ L+ + +M ++G+ + EH+GC+VDLLGRSGRL+
Sbjct: 297 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRLE 356
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H + + E++ L E++P +V+LSNIYA
Sbjct: 357 EAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYA 416
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+W+ G++R ++ R L K PG SA
Sbjct: 417 AVGKWDGAGKVRSLMKARGLRKRPGYSA 444
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT I+VISACA + L G VH L ++ + + I +L+DMY +CG + A
Sbjct: 199 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 258
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R +++WN+MI G NGR A+E FE + EGFKPD T+ +++ S G
Sbjct: 259 VFSGMR-KRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGG 317
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + ++ M++ G+ ++ CV +L L +E V + +E
Sbjct: 318 LTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGRL------EEAMRVVTTMPMRPNE 371
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ G A + E+ P A + + + Y G+++ A ++ LM
Sbjct: 372 VVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLM 431
Query: 243 QQEKVK 248
+ ++
Sbjct: 432 KARGLR 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 102/249 (40%), Gaps = 37/249 (14%)
Query: 112 DPATWNSMISGFSQLG--MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS----ALK 165
D A+W S I+ ++ G A VP+ + +VLSACAD A +
Sbjct: 29 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 88
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK------------- 212
L H V++ ++T L+ Y P A + FD ++
Sbjct: 89 LALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 147
Query: 213 ----------------PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
D W A+I G +NG ++ A+ F M + V+P+ + +A
Sbjct: 148 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAINCFRAMLLDGVEPDYVTLIA 207
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
V+SAC G + + + ++ GL+ ++D+ R G+++ AR++ + +
Sbjct: 208 VISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCGQVELARQVFSGMRKR 266
Query: 317 TVSVYHSLL 325
TV ++S++
Sbjct: 267 TVVSWNSMI 275
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/384 (40%), Positives = 213/384 (55%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF SVI +CA L L+ GR VHG L D + ALV +Y KCG L A V
Sbjct: 109 PSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKV 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ R+I+ WN SMISG+ Q G
Sbjct: 169 FDKIR-ERSIVAWN-----------------------------------SMISGYEQNGF 192
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF++M+ TG+ P SVLSACA L A LG H +++ L+ + + T+
Sbjct: 193 AKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTS 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY++CG S AR FD +K + W AMISGYG NG AVE+F M++ +
Sbjct: 253 LINMYIRCGNVSKAREVFDS--MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLF 310
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS +FVAVLSAC HAG V++ ++F + +++ L P EH C+VD+LGR+G LDEA
Sbjct: 311 PNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYN 370
Query: 309 LIR-ELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I+ E+PE P ++ ++LGAC H N DLG ++A L EPENP +VILSNIYA G
Sbjct: 371 FIKEEIPENPAPAILTAMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAG 430
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
R + V +R + + L K G S
Sbjct: 431 RMDQVEIVRNNMIRKCLKKQVGYS 454
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 118/218 (54%), Gaps = 6/218 (2%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLF--EKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
PD + S+I S+ F + L+ +M + + PS TSV+ +CADLSALK G
Sbjct: 72 NPDSFLFTSLIKSTSK-SHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHG 130
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ HGHV+ D + AL+++Y KCG AR+ FD+ I+ WN+MISGY
Sbjct: 131 RVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDK--IRERSIVAWNSMISGYE 188
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+NG + A+ +FD M++ V+P+SA+FV+VLSAC H G + + + GL
Sbjct: 189 QNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGN-GLDLNV 247
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++++ R G + +ARE+ + E V + +++
Sbjct: 248 VLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMI 285
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S TF+SV+SACA L G VH + + ++GT+L++MY++CG + A
Sbjct: 209 EPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKARE 268
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K RN++ W MI+G NG +A+ELF + G P+ T+ +++S + G
Sbjct: 269 VFDSMK-ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHAG 327
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E +LF + + +VP ++
Sbjct: 328 LVNEGRRLFASIREEYHLVPGVE 350
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/417 (35%), Positives = 224/417 (53%), Gaps = 37/417 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN S++ AC L + G +H + LK +SD I +AL+ MY KCG + A V
Sbjct: 902 PNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRV 961
Query: 69 F----------------------------------QELKGSRNILTWNTMIAGMMLNGRS 94
F Q+ N+++WNT+IAG G
Sbjct: 962 FDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDK 1021
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
E+F + G +PD +W S+ISGF Q E F F++M G PS ++S+
Sbjct: 1022 SMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSL 1081
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC +++ L+ GKE HG+ + + KD + +AL+ MY KCG S A+ F + +
Sbjct: 1082 LPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF--YMMPER 1139
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ WN++I GY +G A+E+F+ M++ K + +F AVL+AC HAG V+ +F
Sbjct: 1140 NTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLF 1199
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M + + ++P+ EH+ CMVDLLGR+G+L EA +LI+ +P EP V+ +LLGAC H N
Sbjct: 1200 XKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN 1259
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E A L E+EPE+P ++LSN+YA GRW + ++++M+ R+ K PG S
Sbjct: 1260 IELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCS 1316
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 229/454 (50%), Gaps = 71/454 (15%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
+ PN T+ ++++ C ++ +Q G+Q+H +K++ S+T +G AL+ +Y KCG +
Sbjct: 208 MGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEE 267
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN------- 117
A VF+ L+ RNI++W I G +G +KA++ F + G +P+ T++
Sbjct: 268 AEIVFESLR-QRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCG 326
Query: 118 ----------------------------SMISGFSQLGMRFEAFKLFEKMQS-------- 141
++I +S LG EA K F++M
Sbjct: 327 CVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWN 386
Query: 142 ---TGMVPSLK---------------------CVTSVLSACADLSALKLGKETHGHVIRA 177
G V + K +++ AC+ +L + H +I++
Sbjct: 387 ALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS 446
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
++ + +A++LI Y +CG A + F Q I D WN++I Y +NG+ A+
Sbjct: 447 NVESNLHVASSLIEAYTQCGSLENAVQVFTQ--ISDADVVSWNSIIKAYSQNGDPWKAIF 504
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+ M +E KP S +F+ VLSAC H+G V + + F M D+ ++P++ H CMVD+L
Sbjct: 505 LLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDIL 564
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+G+L+ A + I++L +PT S++ LL AC + N + E +A K+ ++EP + T +V
Sbjct: 565 GRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYV 624
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
LSN+YA +GRW D R+++ ++++K PG S
Sbjct: 625 TLSNMYAEVGRWADAENQRRLMEQKEISKEPGCS 658
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 166/369 (44%), Gaps = 40/369 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ S +S C ++ GR+ H +KI SD + T+L+DMY KCG + A V
Sbjct: 111 PHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ ++ D AT N +IS +++ G
Sbjct: 171 YDKMTS------------------------------------LDAATCNCLISAYARNGF 194
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+AF++F ++ + G P+ +++L+ C +SA++ GK+ H HV++ + ++ A
Sbjct: 195 FVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNA 254
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+++Y KCG A F+ ++ + W A I+G+ ++G+++ A++ F +M++ ++
Sbjct: 255 LLTLYSKCGMMEEAEIVFES--LRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F VL++CG T + G+ ++D+ G +DEA +
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKK-GMASGVFVGTAIIDMYSGLGEMDEAEK 371
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+++ +V + L A + LN + + M + ++ + SNI+ +
Sbjct: 372 QFKQMGRAASNVSWNALIAGYV-LNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSF 430
Query: 369 EDVGRIRQM 377
+ Q+
Sbjct: 431 PSLATTVQI 439
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 140/337 (41%), Gaps = 43/337 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +S T+ I A L GR +H + I T L+ Y +CG L A
Sbjct: 800 QSSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARK 859
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + NI W ++L G A GF
Sbjct: 860 LFDKIPNT-NIRRW------IVLTG----------ACARRGFYE---------------- 886
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F +MQ G+ P+ + S+L AC LS + G+ H +++ D + +
Sbjct: 887 ---EALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIIS 943
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A R FD I D NAM+SGY ++G A+++ MQQ V
Sbjct: 944 ALIYMYSKCGHVEKACRVFDW--IVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV 1001
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN S+ +++ G ++F +M + G++P + ++ ++ E
Sbjct: 1002 KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTAN-GVEPDVVSWTSVISGFVQNFHNHEGF 1060
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEM 340
+ +E+ + P+ SLL AC N G+E+
Sbjct: 1061 DAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEI 1097
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 5/220 (2%)
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P + V S LS C ++LG+ H V++ L DE + T+LI MY KCG+ A
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
R +D+ + D A N +IS Y RNG + A ++F + +PN ++ +L+ CG
Sbjct: 168 VRVYDK--MTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCG 225
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
+ + Q+ + L ++ L + G ++EA + L + + +
Sbjct: 226 TISAIQEGKQLHAHVVKMQYLSETAVG-NALLTLYSKCGMMEEAEIVFESLRQRNIISWT 284
Query: 323 SLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+ + + H L + M+ +EP T ++L++
Sbjct: 285 ASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLAS 324
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 152/383 (39%), Positives = 213/383 (55%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF SVI +CA L+ L+ GR +HG L SD + TAL+ Y KCG L A V
Sbjct: 109 PSNYTFTSVIKSCADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKV 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ R+++TW NSMISG+ Q G
Sbjct: 169 FDKMR-DRSVVTW-----------------------------------NSMISGYEQNGF 192
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M+ G+ P+ SVLSACA L A LG H + + L+ + + T+
Sbjct: 193 AKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTS 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY +CG S AR FD +K + W AMISGYG NG AVE+F M++ +
Sbjct: 253 LINMYTRCGNVSKAREVFDS--MKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLL 310
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS +FVAVLSAC HAG V++ ++F M +++ L P+ EH C+VD+LGR+G LDEA
Sbjct: 311 PNSITFVAVLSACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYN 370
Query: 309 LIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+E+ EP +++ ++LGAC H N LG ++A EP NP +VILSNIYA GR
Sbjct: 371 FIKEIHEEPAPAIWTAMLGACKMHKNFGLGAQVAEHRLASEPGNPAHYVILSNIYALAGR 430
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ V +R + + L K G S
Sbjct: 431 MDQVEMVRDNMIRKCLKKQVGYS 453
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLF--EKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
PD + S+I S+ F + L+ +M + + PS TSV+ +CADL AL+ G
Sbjct: 72 NPDSFLFTSLIRSTSKF-HNFSVYSLYFYTRMVLSNVAPSNYTFTSVIKSCADLVALRHG 130
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ HGHV+ D + TAL+S Y KCG AR+ FD+ ++ WN+MISGY
Sbjct: 131 RIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDK--MRDRSVVTWNSMISGYE 188
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+NG + A+ +FD M++ V+PNSA+FV+VLSAC H G + + GL
Sbjct: 189 QNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGN-GLDLNV 247
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++++ R G + +ARE+ + E V + +++
Sbjct: 248 VLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMI 285
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 7/176 (3%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MKE + EPNS TF+SV+SACA L G VH + + ++GT+L++MY +CG
Sbjct: 203 MKE-IGVEPNSATFVSVLSACAHLGAFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCG 261
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF +K RN++ W MI+G NG +A+ELF + G P+ T+ +++
Sbjct: 262 NVSKAREVFDSMK-ERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLLPNSITFVAVL 320
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLS-ALKLGKETH 171
S + G+ E ++FE M + +VP ++ C+ +L L A KE H
Sbjct: 321 SACAHAGLVNEGRRVFESMREEYRLVPEVEHHVCLVDMLGRAGLLDEAYNFIKEIH 376
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 216/383 (56%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +VT + V+SAC+ L L+ G++VH + +S+ ++ A++DMY CG + A +
Sbjct: 238 PTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGI 297
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + +R+I++W T+++G G + A F+ + + D +W +MI G+ +
Sbjct: 298 FRSM-NNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK----DYVSWTAMIDGYIRSNR 352
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ+T + P + SVL+ACA L AL+LG+ ++ R + D + A
Sbjct: 353 FKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNA 412
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F E+ D W AMI G NG E A+++F M + +
Sbjct: 413 LIDMYFKCGDVDKAESIFR--EMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASIL 470
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ VLSAC H G VDK + F M G++P H+GC+VDLL R+GRL EA E
Sbjct: 471 PDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYE 530
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P S V+ +LL C + SD+ E + ++ E+EP+N +V+L NIYA R
Sbjct: 531 VIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKR 590
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D+ +RQM+ D+ + K PG S
Sbjct: 591 WNDLRELRQMMMDKGIKKXPGCS 613
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 74/341 (21%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF + + L++GRQ+HG LK Q + + TALV MYL CG L A
Sbjct: 136 KPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARG 195
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +++TWN +I S ++++G
Sbjct: 196 VF-DVCPKADVITWNMII-----------------------------------SAYNKVG 219
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +LF M+ ++P+ + VLSAC+ L L+ GK+ H +V + + +
Sbjct: 220 KFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLEN 279
Query: 188 ALISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDP 216
A+I MY CG+ SW AR +FD+ K D
Sbjct: 280 AMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK--DY 337
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY R+ ++ A+E+F MQ VKP+ + V+VL+AC H G ++ I T
Sbjct: 338 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 397
Query: 277 MDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPE 315
+D + K K + F ++D+ + G +D+A + RE+ +
Sbjct: 398 IDRN---KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQ 435
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 136/313 (43%), Gaps = 50/313 (15%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC----GC 61
S P + IS++ C S+ LQ QVH +K ++ ++ + M C G
Sbjct: 34 SFSPPTHPLISLLETCESMDQLQ---QVHCQAIKKGLNANPVLQNRV--MTFCCTHEYGD 88
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A +F E+ N+ WNTMI G + + L+ + G KPD T+ +
Sbjct: 89 FQYARRLFDEIPEP-NLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 147
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
GF++ D+ AL+ G++ HGHV++ L
Sbjct: 148 GFTR----------------------------------DI-ALEYGRQLHGHVLKHGLQY 172
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFD 240
+ + TAL+ MY+ CGQ AR FD + P D WN +IS Y + G++E + +F
Sbjct: 173 NVFVHTALVQMYLLCGQLDTARGVFD---VCPKADVITWNMIISAYNKVGKFEESRRLFL 229
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+M+ ++V P + + V VLSAC + ++ + + + ++ M+D+
Sbjct: 230 VMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYV-KNCKVESNLVLENAMIDMYADC 288
Query: 301 GRLDEARELIREL 313
G +D A + R +
Sbjct: 289 GEMDSALGIFRSM 301
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +SV++ACA L L+ G + + + ++D + AL+DMY KCG + A +
Sbjct: 369 KPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 428
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ R+ TW MI G+ +NG EKA+++F + PD T+ ++S + G
Sbjct: 429 IFREM-SQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG 487
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + K F +M S G+ P++ C+ +L+ L KE + + + +
Sbjct: 488 LVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL------KEAYEVIENMPIKANS 541
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ + A Q E++PD+ A + + + Y + E+ +M
Sbjct: 542 IVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMM 601
Query: 243 QQEKVK 248
+ +K
Sbjct: 602 MDKGIK 607
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 229/384 (59%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN++T +SV+ ACA L FG +VH + + + D + A++ +Y KCG L A
Sbjct: 207 KPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGILDYARE 266
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ ++ +T+ +MI+G M++G +AM+LF E +P TWN++ISG Q
Sbjct: 267 LFEEMP-EKDGITYCSMISGYMVHGFVNQAMDLFR----EQERPRLPTWNAVISGLVQNN 321
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A +F MQS G P+ + S+L + S LK GKE HG+ IR +++ +AT
Sbjct: 322 RQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVAT 381
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I Y KCG A+ FDQ IK W ++IS Y +G+ A+ +F M +
Sbjct: 382 AIIDSYAKCGYLHGAQLVFDQ--IKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGI 439
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F +VL+AC H+G +D+A +IF ++ ++G++P EH+ CMV +L R+G+L +A
Sbjct: 440 QPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAV 499
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++P EPT V+ +LL + +LG+ + +L E+EPEN +VI++N+Y+ G
Sbjct: 500 EFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPENTGNYVIMANLYSQSG 559
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D IR ++ + +L K+PG S
Sbjct: 560 RWKDADTIRDLMKEVRLKKIPGNS 583
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 156/354 (44%), Gaps = 40/354 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +I C L+ + G+Q+H + D +G+ L+ Y K G + A+NVF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ +NI +WN + L+ ++LF L +
Sbjct: 62 GKIP-RKNIFSWNALFISYTLHNMHTDLLKLFSSLVNS---------------------- 98
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADL-SALKLGKETHGHVIRADLNKDESMATA 188
ST + P VT L A A L S L KE H ++R L D + A
Sbjct: 99 ----------NSTDVKPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNA 148
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKV 247
LI+ Y +C + AR FD+ + D WNAM++GY + G YE E+F +M +V
Sbjct: 149 LITFYSRCDELVLARIMFDR--MPERDTVSWNAMLAGYSQGGSYEECKELFRVMLSSVEV 206
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ + V+VL AC + + +++ +++ +K + ++ L + G LD AR
Sbjct: 207 KPNALTAVSVLQACAQSNDLTFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGILDYAR 265
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EL E+PE Y S++ H + + M + ++ P PT ++S +
Sbjct: 266 ELFEEMPEKDGITYCSMISGYMVH--GFVNQAMDLFREQERPRLPTWNAVISGL 317
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 152/391 (38%), Gaps = 82/391 (20%)
Query: 8 EPNSVTFISVISACASLLYLQ-FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+P+ T + A ASL ++VH L+ + D + AL+ Y +C L A
Sbjct: 104 KPDRFTVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLAR 163
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + + D +WN+M++G+SQ
Sbjct: 164 IMFDRMP------------------------------------ERDTVSWNAMLAGYSQG 187
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E +LF M S+ V P+ SVL ACA + L G E H V + + D S+
Sbjct: 188 GSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSL 247
Query: 186 ATALISMYMKCGQPSWARRFFDQF------------------------------EIKPDD 215
A+I +Y KCG +AR F++ + +P
Sbjct: 248 WNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRL 307
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKA 270
P WNA+ISG +N E AV+IF MQ +PN+ + ++L H G
Sbjct: 308 PT-WNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHG 366
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
I D + + ++D + G L A+ + ++ ++ + S++ A
Sbjct: 367 YAIRNTYDRNIYVAT------AIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAV 420
Query: 331 HLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
H ++++ + M ++P+ T +L+
Sbjct: 421 HGDANVALSLFYEMLTNGIQPDQVTFTSVLA 451
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 208/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
NSVT SV+ ACA L L G+++HG LK +G+A++DMY KCG L AH
Sbjct: 348 RANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQ 407
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F G S+K D WNSMI+ SQ G
Sbjct: 408 TFI---------------------GISDK---------------DAVCWNSMITSCSQNG 431
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G +++ LSACA+L AL GKE H ++R D +
Sbjct: 432 KPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAES 491
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A R FD E K + WN++I+ YG +G + ++ +F M + +
Sbjct: 492 ALIDMYSKCGNLDLACRVFDTMEEK--NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGI 549
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+A++SACGHAG VD+ + F M ++ G+ + EH+ CMVDL GR+GRL+EA
Sbjct: 550 QPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAF 609
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I +P P V+ +LLGAC H N +L E + L +++P+N +V+LSN++A G
Sbjct: 610 GMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAG 669
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WE V +IR ++ +R + K+PG S
Sbjct: 670 QWESVLKIRSLMKERGVQKVPGCS 693
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 165/358 (46%), Gaps = 47/358 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGT--ALVDMYLKCGCLPCA 65
PNSVTF V+S CAS + + FG Q+HGL + + D+ + AL+D+Y KC + A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMA 304
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + + +I+ MI+G +LNG + A+E+F L E + + T
Sbjct: 305 RKIFDQ-RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVT---------- 353
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ SVL ACA L+AL LGKE HGH+++ +
Sbjct: 354 -------------------------LASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 388
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+A++ MY KCG+ A + F I D WN+MI+ +NG+ E A+++F M
Sbjct: 389 GSAIMDMYAKCGRLDLAHQTF--IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 446
Query: 246 KVKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
K + S A LSAC + A H K + F MM F E ++D+ + G L
Sbjct: 447 GTKYDCVSISAALSACANLPALHYGKEIHAF-MMRGAFRSDLFAE--SALIDMYSKCGNL 503
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
D A + + E ++S++ A H L L M ++P++ T I+S
Sbjct: 504 DLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 561
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 140/328 (42%), Gaps = 53/328 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI AC L + GR VH + + D +G++L+ Y + GC+ A +
Sbjct: 145 PDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYL 204
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +L WN M++G+ + G
Sbjct: 205 FDRMPSKDGVL------------------------------------WNVMLNGYVKNGD 228
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT- 187
A +F +M+ T P+ VLS CA + G + HG V+ + L D +A
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 188 -ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI +Y KC AR+ FDQ P D AMISGY NG +A+EIF + QE+
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQ--RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQER 346
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-CMV-----DLLGRS 300
++ NS + +VL AC L T+ + G K H G C V D+ +
Sbjct: 347 MRANSVTLASVLPACA-------GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC 399
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGAC 328
GRLD A + + + ++S++ +C
Sbjct: 400 GRLDLAHQTFIGISDKDAVCWNSMITSC 427
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 153/364 (42%), Gaps = 44/364 (12%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+D+ + +S++ C L GRQ H L + ++GT L+ MY+ CG A
Sbjct: 41 NDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F +L+ W + +P WN MI GF+
Sbjct: 101 KNIFYQLR------LWCS----------------------------EP--WNWMIRGFTM 124
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+G A + KM G +P V+ AC L+++ LG+ H + D +
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
++LI Y + G AR FD+ K D WN M++GY +NG++++A +F M++
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGVFMEMRRT 242
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK---PKQEHFGCMVDLLGRSGR 302
+ PNS +F VLS C ++ Q+ ++ GL+ P F ++D+ +
Sbjct: 243 ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVANTFA-LIDIYFKCRD 300
Query: 303 LDEARELI-RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
++ AR++ + P V + G +N++ E LQE N +
Sbjct: 301 VEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPA 360
Query: 362 YAGL 365
AGL
Sbjct: 361 CAGL 364
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 208/382 (54%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVT SV+ ACA L L G+++HG LK +G+A++DMY KCG L AH F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTF 508
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
G S+K D WNSMI+ SQ G
Sbjct: 509 I---------------------GISDK---------------DAVCWNSMITSCSQNGKP 532
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +M G +++ LSACA+L AL GKE H ++R D +AL
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESAL 592
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A R FD E K + WN++I+ YG +G + ++ +F M + ++P
Sbjct: 593 IDMYSKCGNLDLACRVFDTMEEK--NEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQP 650
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+A++SACGHAG VD+ + F M ++ G+ + EH+ CMVDL GR+GRL+EA +
Sbjct: 651 DHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGM 710
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P P V+ +LLGAC H N +L E + L +++P+N +V+LSN++A G+W
Sbjct: 711 INSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQW 770
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E V +IR ++ +R + K+PG S
Sbjct: 771 ESVLKIRSLMKERGVQKVPGCS 792
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/327 (32%), Positives = 151/327 (46%), Gaps = 51/327 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVTF V+S CAS + + FG Q+HGL + + D+ + L+ MY KCG L A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARR 304
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + K D TWN MISG+ Q G
Sbjct: 305 LFDMMP------------------------------------KTDLVTWNGMISGYVQNG 328
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M S M P +S L ++ + L+ GKE H ++IR ++ D + +
Sbjct: 329 FMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI +Y KC AR+ FDQ P D AMISGY NG +A+EIF + QE++
Sbjct: 389 ALIDIYFKCRDVEMARKIFDQ--RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERM 446
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-CMV-----DLLGRSG 301
+ NS + +VL AC L T+ + G K H G C V D+ + G
Sbjct: 447 RANSVTLASVLPACA-------GLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCG 499
Query: 302 RLDEARELIRELPEPTVSVYHSLLGAC 328
RLD A + + + ++S++ +C
Sbjct: 500 RLDLAHQTFIGISDKDAVCWNSMITSC 526
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 161/356 (45%), Gaps = 45/356 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+TF S + + L+ G+++H ++ D + +AL+D+Y KC + A
Sbjct: 346 KPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARK 405
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + +I+ MI+G +LNG + A+E+F L E + + T
Sbjct: 406 IFDQ-RTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVT------------ 452
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL ACA L+AL LGKE HGH+++ + +
Sbjct: 453 -----------------------LASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGS 489
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG+ A + F I D WN+MI+ +NG+ E A+++F M
Sbjct: 490 AIMDMYAKCGRLDLAHQTF--IGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
K + S A LSAC + A H K + F MM F E ++D+ + G LD
Sbjct: 548 KYDCVSISAALSACANLPALHYGKEIHAF-MMRGAFRSDLFAE--SALIDMYSKCGNLDL 604
Query: 306 ARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
A + + E ++S++ A H L L M ++P++ T I+S
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 149/349 (42%), Gaps = 42/349 (12%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+D+ + +S++ C L GRQ H L + ++GT L+ MY+ CG A
Sbjct: 41 NDDSLAPQLVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDA 100
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F +L+ W + +P WN MI GF+
Sbjct: 101 KNIFYQLR------LWCS----------------------------EP--WNWMIRGFTM 124
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+G A + KM G +P V+ AC L+++ LG+ H + D +
Sbjct: 125 MGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFV 184
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
++LI Y + G AR FD+ K D WN M++GY +NG++++A +F M++
Sbjct: 185 GSSLIKFYSENGCIHDARYLFDRMPSK--DGVLWNVMLNGYVKNGDWDNATGVFMEMRRT 242
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ PNS +F VLS C ++ Q+ ++ GL+ ++ + + G L +
Sbjct: 243 ETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVANTLLAMYAKCGHLFD 301
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
AR L +P+ + ++ ++ ++ + +E + EM P
Sbjct: 302 ARRLFDMMPKTDLVTWNGMISG---YVQNGFMDEASCLFHEMISARMKP 347
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 109/250 (43%), Gaps = 38/250 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI AC L + GR VH + + D +G++L+ Y + GC+ A +
Sbjct: 145 PDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYL 204
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +L WN M++G+ + G
Sbjct: 205 FDRMPSKDGVL------------------------------------WNVMLNGYVKNGD 228
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F +M+ T P+ VLS CA + G + HG V+ + L D +A
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KCG ARR FD + D WN MISGY +NG + A +F M ++K
Sbjct: 289 LLAMYAKCGHLFDARRLFDM--MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMK 346
Query: 249 PNSASFVAVL 258
P+S +F + L
Sbjct: 347 PDSITFSSFL 356
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ S+L C D S L G++ H ++ + + + T L+ MY+ CG A+ F Q
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ +P WN MI G+ G+++ A+ + M P+ +F V+ ACG V
Sbjct: 109 LWCSEP--WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALG 166
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
+ + G + ++ +G + +AR L +P +++ +L
Sbjct: 167 RVVHDKI-QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225
Query: 331 HLNSD--LGEEMAMKLQEMEPENPTPFVILS 359
+ + D G M M+ E P + T +LS
Sbjct: 226 NGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/383 (37%), Positives = 204/383 (53%), Gaps = 38/383 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T + V+ ACA L L G +HGL +K+ +SD + AL+DMY KCG LP A +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + F D TWN +I+ + Q G
Sbjct: 589 FNK-----------------------------------TDFTKDEVTWNVIIAAYMQNGH 613
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +M+ P+ SVL A A L+A + G H +I+ + + +
Sbjct: 614 AKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNS 673
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ ++ + F++ + K D WNAM+SGY +G + A+ +F LMQ+ +V+
Sbjct: 674 LIDMYAKCGQLXYSEKLFNEMDHK--DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQ 731
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+S SFV+VLSAC H G V++ +IF M D + +KP EH+ CMVDLLGR+G DE
Sbjct: 732 IDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLG 791
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP V+ +LLG+C H N LGE L ++EP NP FV+LS+IYA GR
Sbjct: 792 FIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGR 851
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D G+ R +ND L K PG S
Sbjct: 852 WADAGKARSKMNDLGLKKTPGCS 874
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 166/379 (43%), Gaps = 39/379 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +S++ ACA L L+ G+ +H T+K + SD GTALV MY KCG A
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALT 486
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + SR+I+TWN++I G G A+++F L PD T
Sbjct: 487 TFNRM-SSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTM----------- 534
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
G+VP ACA L+ L G HG +++ D +
Sbjct: 535 --------------VGVVP----------ACALLNDLDQGTCIHGLIVKLGFESDCHVKN 570
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A F++ + D+ WN +I+ Y +NG + A+ F M+ E
Sbjct: 571 ALIDMYAKCGSLPSAEFLFNKTDFTKDEVT-WNVIIAAYMQNGHAKEAISSFHQMRLENF 629
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PNS +FV+VL A + + + F G ++D+ + G+L +
Sbjct: 630 HPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSE 688
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLG 366
+L E+ ++++L H + D + +QE + + + FV + + G
Sbjct: 689 KLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXG 748
Query: 367 RWEDVGRIRQMINDRQLTK 385
E+ +I ++D+ K
Sbjct: 749 LVEEGRKIFHSMSDKYHIK 767
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 42/352 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N V+ +S A A + L+ G+++HG L+ SD ++ T L+ MY KCG
Sbjct: 328 NKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCG--------- 378
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+EKA +LF GL D W+++I+ Q G
Sbjct: 379 -----------------------ETEKAKQLFWGLQGR----DLVAWSAIIAALVQTGYP 411
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF++MQ+ M P+ + S+L ACADLS LKLGK H ++AD++ D S TAL
Sbjct: 412 EEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTAL 471
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+SMY KCG + A F++ + D WN++I+GY + G+ +A+++F ++ + P
Sbjct: 472 VSMYAKCGFFTAALTTFNRMSSR--DIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINP 529
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ + V V+ AC +D+ I ++ G + ++D+ + G L A L
Sbjct: 530 DAGTMVGVVPACALLNDLDQGTCIHGLI-VKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 310 IRELPEPTVSVYHSLLGACWC---HLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+ V +++ A + H + M+L+ P + T +L
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVL 640
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 154/352 (43%), Gaps = 54/352 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF V+ AC L LQ G HG + + D IG LVDMY K G L A
Sbjct: 126 EPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRARE 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R+++ WN MIAG+ +SE DP
Sbjct: 186 VFDKMP-KRDVVAWNAMIAGL---SQSE----------------DPC------------- 212
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F MQ G+ PS + ++ LS ++L + HG+V R D + +++
Sbjct: 213 ---EAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSN 267
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI +Y KCG ARR FDQ + DD + W M++GY NG + +E+FD M+ V
Sbjct: 268 GLIDLYSKCGDVDVARRVFDQM-VDQDDVS-WGTMMAGYAHNGCFVEVLELFDKMKLGNV 325
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ N S V+ A ++K +I +D D + ++ + + G
Sbjct: 326 RINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATP------LMVMYAKCGE 379
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
++A++L L + + +++ A + + EE QEM+ + P
Sbjct: 380 TEKAKQLFWGLQGRDLVAWSAIIAAL---VQTGYPEEALSLFQEMQNQKMKP 428
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 51/324 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+SV+ +++ L ++ R +HG + + + + L+D+Y KCG + A
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARR 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +W +M++G++ G
Sbjct: 285 VFDQM------------------------------------VDQDDVSWGTMMAGYAHNG 308
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +LF+KM+ + + S A A+ L+ GKE HG ++ ++ D +AT
Sbjct: 309 CFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVAT 368
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG+ A++ F + ++ D W+A+I+ + G E A+ +F MQ +K+
Sbjct: 369 PLMVMYAKCGETEKAKQLF--WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKM 426
Query: 248 KPNSASFVAVLSACGHAG--HVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGR 302
KPN + +++L AC + K++ FT+ MD D +V + + G
Sbjct: 427 KPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGT------ALVSMYAKCGF 480
Query: 303 LDEARELIRELPEPTVSVYHSLLG 326
A + + ++SL+
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLIN 504
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 9/208 (4%)
Query: 111 PDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+P+ WNSMI +++ EA +++ M G+ P T VL AC L+ G
Sbjct: 90 PNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGV 149
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
HG + R L +D + L+ MY K G AR FD+ + D WNAMI+G +
Sbjct: 150 WFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKR--DVVAWNAMIAGLSQ 207
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQ 287
+ + AV+ F MQ V+P+S S + + +++ I + DF
Sbjct: 208 SEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN 267
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPE 315
++DL + G +D AR + ++ +
Sbjct: 268 G----LIDLYSKCGDVDVARRVFDQMVD 291
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 217/386 (56%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L L FGRQVH +++ +D + + LVDMY KCG + A +
Sbjct: 414 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 473
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + D WNS+ISG +
Sbjct: 474 IFNKMT------------------------------------ERDVVCWNSIISGLTIHS 497
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF F++M+ G++P+ S++++C+ LS++ G++ H V++ +++ + +
Sbjct: 498 LNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGS 557
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FFD +K + WN MI GY +NG + AVE+F+ M +
Sbjct: 558 ALIDMYAKCGNMDDARLFFDTMMMK--NIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQ 615
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP++ +F+AVL+ C H+G VDKA+ F M++ +G+ P EH+ C++D LGR+GR E
Sbjct: 616 KPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVE 675
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
LI ++P +P ++ LL AC H N++LG+ A L ++P+NP+P+V+LSNIYA
Sbjct: 676 ALIHKMPCKDDPI--IWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYAS 733
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R ++++R + K G S
Sbjct: 734 LGRHGDASAVRALMSNRGVVKGRGYS 759
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 179/403 (44%), Gaps = 52/403 (12%)
Query: 2 KECLSDEP-NSVTFISVISACASLLYLQF--------GRQVHGLTLKIEKQSDTMIGTAL 52
+ C S P + V+ SV+ ACA + G+ +H L ++ SD +G +L
Sbjct: 232 RMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSL 291
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+DMY KC + A VF+ L S I++WN +I G G KA+E+ + GF+P+
Sbjct: 292 IDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPN 350
Query: 113 PAT-------------------------------WNSMISGFSQLGMRFEAFKLFEKMQS 141
T WN+++SG+ Q + +LF +MQ
Sbjct: 351 EVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQH 410
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSW 201
+ P + +LS+C+ L L G++ H +R L+ D +A+ L+ MY KCGQ
Sbjct: 411 QNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 470
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
AR F++ + D WN++ISG + + A + F M++ + P +S+ +++++C
Sbjct: 471 ARSIFNKMTER--DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSC 528
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
+ QI + D G ++D+ + G +D+AR + + +
Sbjct: 529 SRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAW 587
Query: 322 HSLLGACWCHLNSDLGEEMA-----MKLQEMEPENPTPFVILS 359
+ ++ + + LG++ M E +P+ T +L+
Sbjct: 588 NEMIHG---YAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLT 627
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 159/362 (43%), Gaps = 84/362 (23%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T SV+SAC L L GR+ HG+ +K+ ++ + AL+ MY KCG +
Sbjct: 139 PTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVG----- 193
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
A+ LF G+A +P+ ++ +M+ G +Q G
Sbjct: 194 ---------------------------DAVRLFYGMA----RPNEVSFTAMMGGLAQTGS 222
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACA-----DLS---ALKLGKETHGHVIRADLN 180
+A +LF +M +G+ V+SVL ACA D S A +LG+ H V+R
Sbjct: 223 IDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFG 282
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D+ + +LI MY KC + A + F+ + WN +I+G+G+ G AVE+
Sbjct: 283 SDQHVGNSLIDMYTKCVEMDEAVKVFE--SLPSVTIVSWNILITGFGQEGSCAKAVEVLS 340
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
LMQ+ +PN ++ +L++C +K + H
Sbjct: 341 LMQEAGFEPNEVTYSNLLASC---------------------IKARDVH----------- 368
Query: 301 GRLDEARELIRELPEPTVSVYHSLL-GACWCHLNSDLGEEM-AMKLQEMEPENPTPFVIL 358
AR + ++ P+V+ +++LL G C + D E M+ Q ++P+ T VIL
Sbjct: 369 ----SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVIL 424
Query: 359 SN 360
S+
Sbjct: 425 SS 426
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%), Gaps = 21/345 (6%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT + LV++Y + G A F+ L S N ++N ++ G + A +L G+
Sbjct: 42 DTFLANRLVELYSRAGLPRHALLAFRALP-SPNDYSYNAALSAACRAGDLDAARDLLGGM 100
Query: 105 AHEGFKPDPATWNSMISGFSQL-GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ + +WN++IS ++ G EA +++ +M++ G++P+ + SVLSAC L+A
Sbjct: 101 P----RRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAA 156
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L G+ HG ++ L+ ++ + AL+ MY KCG A R F +P++ +F AM+
Sbjct: 157 LGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMA-RPNEVSF-TAMM 214
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL-QIFTMMDDDFG 282
G + G + A+ +F M + V + S +VL AC A D ++ + F +
Sbjct: 215 GGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHA 274
Query: 283 LKPKQ-----EHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
L ++ +H G ++D+ + +DEA ++ LP T+ ++ L+ +
Sbjct: 275 LVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAK 334
Query: 337 GEEMAMKLQE--MEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
E+ +QE EP V SN+ A + DV R M +
Sbjct: 335 AVEVLSLMQEAGFEPNE----VTYSNLLASCIKARDVHSARAMFD 375
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 228/381 (59%), Gaps = 10/381 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+S CA + + +G+++HG +K + + AL+ Y K + AH VF E+K ++
Sbjct: 274 VLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIK-NK 332
Query: 77 NILTWNTMIAGMMLNGRSEKA------MELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
N+++WN +I+ +G ++A ME + H +P+ +W+++ISGF+ G
Sbjct: 333 NLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGE 392
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
++ +LF +MQ ++ + ++SVLS CA+L+AL LG+E HG+ IR ++ + + LI
Sbjct: 393 KSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLI 452
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MYMKCG FD E + D WN++I GYG +G E+A+ F+ M + ++KP+
Sbjct: 453 NMYMKCGDFKEGHLVFDNIEGR--DLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPD 510
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ +FVA+LSAC HAG V +F M +F ++P EH+ CMVDLLGR+G L EA +++
Sbjct: 511 NITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIV 570
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
R +P EP V+ +LL +C + + D+ EE A ++ ++ + F++LSNIYA GRW+
Sbjct: 571 RNMPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWD 630
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
D R+R + L K+PG S
Sbjct: 631 DSARVRVSARTKGLKKIPGQS 651
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 143/275 (52%), Gaps = 9/275 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T VI AC+SL R VH L++ ++ + LV MY K G + A +
Sbjct: 130 PDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQL 189
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+I++WNTM++G LN S A +F+ + EG +P+ TW S++S ++ G+
Sbjct: 190 FDGMF-VRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGL 248
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E +LF+ M++ G+ + + VLS CAD++ + GKE HG+V++ + A
Sbjct: 249 YDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNA 308
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-- 246
LI Y K A + F EIK + WNA+IS Y +G + A F M++
Sbjct: 309 LIGTYGKHQHMGDAHKVF--LEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSD 366
Query: 247 ----VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
V+PN S+ AV+S + G +K+L++F M
Sbjct: 367 DHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQM 401
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
N VT SV+S CA L L GR++HG ++ + ++G L++MY+KCG H V
Sbjct: 408 ANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLV 467
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++G R++++WN++I G ++G E A+ F + KPD T+ +++S S G+
Sbjct: 468 FDNIEG-RDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGL 526
Query: 129 RFEAFKLFEKM 139
LF++M
Sbjct: 527 VAAGRNLFDQM 537
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 121/285 (42%), Gaps = 40/285 (14%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE--LKGSRNILTWNTM 84
LQ RQ+H + + L+ +Y + L A VF L+ ++L WN++
Sbjct: 44 LQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSI 103
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
I + +G + A+EL+ + GF PD T +I S LG
Sbjct: 104 IRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLG----------------- 146
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
+S L AL++G H HV+ L+ MY K G+ AR+
Sbjct: 147 -------SSYLCRIVHCHALQMGFRNHLHVV-----------NELVGMYGKLGRMEDARQ 188
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FD ++ WN M+SGY N + A +F M+ E ++PNS ++ ++LS+
Sbjct: 189 LFDGMFVRS--IVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARC 246
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
G D+ L++F +M G++ E ++ + +D +E+
Sbjct: 247 GLYDETLELFKVMRTR-GIEIGAEALAVVLSVCADMAEVDWGKEI 290
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 102/245 (41%), Gaps = 21/245 (8%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL-----KCVTSVLSACADLSALKLGKETH 171
N+ F L RF+ L + + ++ S +C T L+ ++ H
Sbjct: 3 NAASERFRSLFSRFQPIFLISHVHNDELIYSFHAFFQRCFT-----------LQQARQLH 51
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNG 230
++ ++ +A LI++Y + S AR+ FD ++ WN++I +G
Sbjct: 52 SQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNSIIRANVSHG 111
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
++ A+E++ M++ P+ + V+ AC G +I G +
Sbjct: 112 YHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGS-SYLCRIVHCHALQMGFRNHLHVV 170
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD-LGEEMAMKLQEMEP 349
+V + G+ GR+++AR+L + ++ +++++ LN D LG K E+E
Sbjct: 171 NELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSG--YALNRDSLGASRVFKRMELEG 228
Query: 350 ENPTP 354
P
Sbjct: 229 LQPNS 233
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 224/423 (52%), Gaps = 40/423 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S T +S + +C L L+ G +VH L K Q + ALVDMY +CG + A
Sbjct: 282 EPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGIDEASL 341
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VF E K ++++TW +MI G ++NG ++ A+ L + +G P+ T
Sbjct: 342 VFAETK-EKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLC 400
Query: 116 --------------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
WN+++SG + EA LF+ M + +
Sbjct: 401 YMYAKCNAVSYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHA 460
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ A A L+ LK H +++R+ ++ T LI MY KCG +A + FD+
Sbjct: 461 TFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEI 520
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
K D W+ +I+GYG +G E+AV +F+ M ++PN +F +VL AC H G VD
Sbjct: 521 PNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDD 580
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGAC 328
L +F M +++ P H+ C+VDLLGR+GRLDEA +LI+ +P + S++ +LLGAC
Sbjct: 581 GLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGAC 640
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPG 388
H N +LGE A +L E+EPE+ +++L+NIYA +GRW+D +R +++ L K P
Sbjct: 641 LIHQNVELGEVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPA 700
Query: 389 ISA 391
S+
Sbjct: 701 QSS 703
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 160/362 (44%), Gaps = 52/362 (14%)
Query: 11 SVTFISVISACASLLY-------LQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCG 60
S + I+ + C SLL L + +HG T+ + + + + L Y CG
Sbjct: 72 SKSLIANVHRCDSLLRHYAATRSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCG 131
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C+P A +F +L P WN++I
Sbjct: 132 CVPLARKLFDDLS------------------------------------DPSLFLWNAII 155
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
+ G F+A ++F+ M +G P V+ AC+ +S L +G HG + +
Sbjct: 156 KMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGF 215
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ + + +L++MYM CG+ AR+ F+ + WN MISG+ +NG E A+ +F
Sbjct: 216 SSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKR--SVVSWNTMISGWFQNGRPEEALAVF 273
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
+ M +V+P+SA+ V+ L +CG+ ++ +++ ++ + L+ K E +VD+ R
Sbjct: 274 NSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNH-LQEKIEVRNALVDMYSR 332
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLN--SDLGEEMAMKLQEMEPENPTPFVI 357
G +DEA + E E V + S++ + N S L AM+L + P T +
Sbjct: 333 CGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392
Query: 358 LS 359
LS
Sbjct: 393 LS 394
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI AC+ + L G +HG L S+ + +L+ MY+ CG + A V
Sbjct: 182 PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQV 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F N M+ K +WN+MISG+ Q G
Sbjct: 242 F------------NVML------------------------KRSVVSWNTMISGWFQNGR 265
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M + P + S L +C L L+LG + H V + L + + A
Sbjct: 266 PEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNA 325
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY +CG A F E K D W +MI+GY NG +SA+ + MQ + V
Sbjct: 326 LVDMYSRCGGIDEASLVFA--ETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVV 383
Query: 249 PNSASFVAVLSACG 262
PN+ + ++LSAC
Sbjct: 384 PNAVTLASLLSACA 397
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 21/262 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N TF SVI A A L L+ +H ++ S + T L+DMY KCG L AH
Sbjct: 456 EANHATFNSVIPAYAILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHK 515
Query: 68 VFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+ ++I+ W+ +IAG ++G E A+ LF + H G +P+ T+ S++ S
Sbjct: 516 IFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHR 575
Query: 127 GMRFEAFKLFEKM----QSTGMVPSLKCVTSVLSACADLS-ALKLGKE---THGHVIRAD 178
G+ + LF+ M S+ + CV +L L A L K H I
Sbjct: 576 GLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGA 635
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L + LI ++ G+ + R FE++P+ + + + Y G ++ A +
Sbjct: 636 L-----LGACLIHQNVELGEVAAERL----FELEPESTGNYILLANIYAAVGRWKDAENV 686
Query: 239 FDLMQQ---EKVKPNSASFVAV 257
+M + K S+ VAV
Sbjct: 687 RHIMSKIGLRKTPAQSSVGVAV 708
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 217/386 (56%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L L FGRQVH +++ +D + + LVDMY KCG + A +
Sbjct: 137 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 196
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + D WNS+ISG +
Sbjct: 197 IFNKMT------------------------------------ERDVVCWNSIISGLTIHS 220
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF F++M+ G++P+ S++++C+ LS++ G++ H V++ +++ + +
Sbjct: 221 LNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGS 280
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FFD +K + WN MI GY +NG + AVE+F+ M +
Sbjct: 281 ALIDMYAKCGNMDDARLFFDTMMMK--NIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQ 338
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP++ +F+AVL+ C H+G VDKA+ F M++ +G+ P EH+ C++D LGR+GR E
Sbjct: 339 KPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVE 398
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
LI ++P +P ++ LL AC H N++LG+ A L ++P+NP+P+V+LSNIYA
Sbjct: 399 ALIHKMPCKDDPI--IWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYAS 456
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R ++++R + K G S
Sbjct: 457 LGRHGDASAVRALMSNRGVVKGRGYS 482
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 158/352 (44%), Gaps = 43/352 (12%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD +G +L+DMY KC + A VF+ L S I++WN +I G G KA+E+
Sbjct: 6 SDQHVGNSLIDMYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSL 64
Query: 104 LAHEGFKPDPAT-------------------------------WNSMISGFSQLGMRFEA 132
+ GF+P+ T WN+++SG+ Q +
Sbjct: 65 MQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDT 124
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ + P + +LS+C+ L L G++ H +R L+ D +A+ L+ M
Sbjct: 125 IELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDM 184
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCGQ AR F++ + D WN++ISG + + A + F M++ + P +
Sbjct: 185 YSKCGQIGIARSIFNKMTER--DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTES 242
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
S+ +++++C + QI + D G ++D+ + G +D+AR
Sbjct: 243 SYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDARLFFDT 301
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQEMEPENPTPFVILS 359
+ + ++ ++ + + LG++ M E +P+ T +L+
Sbjct: 302 MMMKNIVAWNEMIHG---YAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLT 350
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV--LSACAD-LSA 163
+GF D NS+I +++ EA K+FE + S +V +T +CA +
Sbjct: 2 KGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEV 61
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L L +E A +E + L++ +K AR FD+ I WN ++
Sbjct: 62 LSLMQE-------AGFEPNEVTYSNLLASCIKARDVHSARAMFDK--ISRPSVTTWNTLL 112
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMM 277
SGY + +++ +E+F MQ + V+P+ + +LS+C G +D Q+ F +
Sbjct: 113 SGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLH 172
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+D F +VD+ + G++ AR + ++ E V ++S++ H
Sbjct: 173 NDMFVASG-------LVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIH 219
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 40/187 (21%)
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
R D+ + +LI MY KC + A + F+ + WN +I+G+G+ G A
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFES--LPSVTIVSWNILITGFGQEGSCAKA 58
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
VE+ LMQ+ +PN ++ +L++C +K + H
Sbjct: 59 VEVLSLMQEAGFEPNEVTYSNLLASC---------------------IKARDVH------ 91
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL-GACWCHLNSDLGEEM-AMKLQEMEPENPT 353
AR + ++ P+V+ +++LL G C + D E M+ Q ++P+ T
Sbjct: 92 ---------SARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 142
Query: 354 PFVILSN 360
VILS+
Sbjct: 143 LAVILSS 149
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/386 (34%), Positives = 217/386 (56%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L L FGRQVH +++ +D + + LVDMY KCG + A +
Sbjct: 121 QPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARS 180
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + D WNS+ISG +
Sbjct: 181 IFNKMT------------------------------------ERDVVCWNSIISGLTIHS 204
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF F++M+ G++P+ S++++C+ LS++ G++ H V++ +++ + +
Sbjct: 205 LNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGS 264
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FFD +K + WN MI GY +NG + AVE+F+ M +
Sbjct: 265 ALIDMYAKCGNMDDARLFFDTMMMK--NIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQ 322
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP++ +F+AVL+ C H+G VDKA+ F M++ +G+ P EH+ C++D LGR+GR E
Sbjct: 323 KPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVE 382
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
LI ++P +P ++ LL AC H N++LG+ A L ++P+NP+P+V+LSNIYA
Sbjct: 383 ALIHKMPCKDDPI--IWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYAS 440
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R ++++R + K G S
Sbjct: 441 LGRHGDASAVRALMSNRGVVKGRGYS 466
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 150/341 (43%), Gaps = 43/341 (12%)
Query: 55 MYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
MY KC + A VF+ L S I++WN +I G G KA+E+ + GF+P+
Sbjct: 1 MYTKCVEMDEAVKVFESLP-SVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEV 59
Query: 115 T-------------------------------WNSMISGFSQLGMRFEAFKLFEKMQSTG 143
T WN+++SG+ Q + +LF +MQ
Sbjct: 60 TYSNLLASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQN 119
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ P + +LS+C+ L L G++ H +R L+ D +A+ L+ MY KCGQ AR
Sbjct: 120 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 179
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F++ + D WN++ISG + + A + F M++ + P +S+ +++++C
Sbjct: 180 SIFNK--MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSR 237
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
+ QI + D G ++D+ + G +D+AR + + ++
Sbjct: 238 LSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNE 296
Query: 324 LLGACWCHLNSDLGEEMA-----MKLQEMEPENPTPFVILS 359
++ + + LG++ M E +P+ T +L+
Sbjct: 297 MIHG---YAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLT 334
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 209/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SV+ ACA++ L G Q+H +KI SD + AL+D+Y KCG
Sbjct: 136 PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG-------- 187
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R E +MELF H + TWN++I G QLG
Sbjct: 188 ------------------------RMENSMELFAESPHR----NDVTWNTVIVGHVQLGD 219
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +LF M + + +S L ACA L+AL+ G + H ++ +KD + A
Sbjct: 220 GEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNA 279
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD + D WNAMISGY +G A+ IFD MQ+ +VK
Sbjct: 280 LIDMYAKCGSIKDARLVFDL--MNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVK 337
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC +AG +D+ FT M D G++P EH+ CMV LLGR G LD+A +
Sbjct: 338 PDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVK 397
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI E+P +P+V V+ +LLGAC H + +LG A ++ EMEP++ V+LSN+YA R
Sbjct: 398 LIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKR 457
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++V +R+ + + + K PG+S
Sbjct: 458 WDNVASVRKNMKRKGVKKEPGLS 480
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 116/239 (48%), Gaps = 18/239 (7%)
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G ++ WN ++ + + A +LF+ + + + ++ ++I G+++ EA
Sbjct: 69 GCLDLFAWNILLNMYVKSDFLCDASKLFDEMP----ERNTISFVTLIQGYAESVRFLEAI 124
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+LF ++ ++P+ SVL ACA + L LG + H HVI+ L+ D ++ AL+ +Y
Sbjct: 125 ELFVRLHRE-VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVY 183
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG+ + F + + D WN +I G+ + G+ E A+ +F M + +V+ +
Sbjct: 184 AKCGRMENSMELFAESPHRND--VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVT 241
Query: 254 FVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + L AC ++ LQI T D D + ++D+ + G + +AR
Sbjct: 242 YSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT------NALIDMYAKCGSIKDAR 294
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ VT+ S + ACASL L+ G Q+H LT+K D ++ AL+DMY KCG + A
Sbjct: 236 QATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARL 295
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L ++ ++WN MI+G ++G +A+ +F+ + KPD T+ ++S + G
Sbjct: 296 VF-DLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAG 354
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVL 155
+ + F M Q G+ P ++ T ++
Sbjct: 355 LLDQGQAYFTSMIQDHGIEPCIEHYTCMV 383
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 161/462 (34%), Positives = 238/462 (51%), Gaps = 79/462 (17%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS +PN TF I +C++LL L GRQ H L + D + +ALVDMY KCG L
Sbjct: 146 LSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRD 205
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF----------EG----------- 103
A +F E+ RNI++W +MI G + N + +A+ LF EG
Sbjct: 206 ARTLFDEI-SHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAM 264
Query: 104 ----------------------LAHEGFKPDPATWNSMISGFSQLG-------------- 127
L GF+ D N+++ +++ G
Sbjct: 265 VSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAE 324
Query: 128 -----------------MRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKE 169
M E+ ++F +M G + + +++VL ACA + +LGK
Sbjct: 325 RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKC 384
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H VI+ L + + T++I MY KCG+ AR+ FD+ ++ + W+AM++GYG +
Sbjct: 385 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR--MREKNVKSWSAMVAGYGMH 442
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G + A+E+F M VKPN +FV+VL+AC HAG +++ F M +F ++P EH
Sbjct: 443 GHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH 502
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+GCMVDLLGR+G L EA +LI+ + P V+ +LLGAC H N DLGE A KL E++
Sbjct: 503 YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELD 562
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P+N +V+LSNIYA GRWEDV R+R ++ + L K PG S
Sbjct: 563 PKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFS 604
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 128/255 (50%), Gaps = 15/255 (5%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+VT +V+ ACA + G+ +H +K+ +S+ +GT+++DMY KCG + A F
Sbjct: 362 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 421
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ +N+ +W+ M+AG ++G +++A+E+F + G KP+ T+ S+++ S G+
Sbjct: 422 DRMR-EKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 480
Query: 130 FEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDES 184
E + F+ M V P ++ C+ +L L A L K G +R D +
Sbjct: 481 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIK---GMKLRPDFVVWGA 537
Query: 185 MATAL-ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ A + + G+ S AR+ FE+ P + ++ + + Y G +E + LM+
Sbjct: 538 LLGACRMHKNVDLGEIS-ARKL---FELDPKNCGYYVLLSNIYADAGRWEDVERMRILMK 593
Query: 244 QEK-VKPNSASFVAV 257
VKP S V +
Sbjct: 594 NSGLVKPPGFSLVDI 608
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 21/231 (9%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + +WNS+I+ ++ G EA + F M+ + P+ + +C+ L L G++
Sbjct: 114 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 173
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H + D +++AL+ MY KCG+ AR FD EI + W +MI+GY +N
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFD--EISHRNIVSWTSMITGYVQN 231
Query: 230 GEYESAVEIF-DLMQQE-------KVKPNSASFVAVLSACGHAGH--VDKALQIFTM--- 276
+ A+ +F + + +E +V + + V+VLSAC + + + F +
Sbjct: 232 DDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRG 291
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ D G++ ++D + G L +R + + E V ++S++
Sbjct: 292 FEGDLGVE------NTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAV 336
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/450 (32%), Positives = 231/450 (51%), Gaps = 71/450 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN F SV SAC+SLL ++GRQ+HG+++K D G +L DMY KCG L CA V
Sbjct: 264 PNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVV 323
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAM-----------------------------E 99
F ++ G +++ WN +IAG G +++A+ E
Sbjct: 324 FYQI-GRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSE 382
Query: 100 LFEGLAHEGF--------------------------------------KPDPATWNSMIS 121
L++G+ G+ D +WN++++
Sbjct: 383 LYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILT 442
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ E F+L + M + P +T+VL A A+ ++++G + H + ++ LN
Sbjct: 443 ACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNC 502
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D S+ LI +Y KCG A + FD I PD + W+++I GY + G E A+++F
Sbjct: 503 DTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVS-WSSLILGYAQFGYGEEALKLFKT 560
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ VKPN +FV VL+AC H G V++ +++ M+ +FG+ P +EH CMVDLL R+G
Sbjct: 561 MRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAG 620
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L+EA I ++ +P + V+ +LL AC H N D+G+ A + +++P N V+L N
Sbjct: 621 CLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCN 680
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G WEDV R+R ++ R + K+PG S
Sbjct: 681 IYASKGNWEDVARLRSLMKQRGVRKVPGQS 710
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 45/356 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF S+I AC+SL + GRQ+H LK E + + AL+ MY K + A +V
Sbjct: 162 PDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDV 221
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +R++++W SMI+GFSQLG
Sbjct: 222 FSRM-ATRDLISWG-----------------------------------SMIAGFSQLGY 245
Query: 129 RFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F++M G+ +P+ SV SAC+ L + G++ HG I+ L +D
Sbjct: 246 ELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGC 305
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L MY KCG S AR F ++I D WNA+I+G+ G+ + A+ F M+ + +
Sbjct: 306 SLCDMYAKCGLLSCARVVF--YQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGL 363
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + ++L AC + + +Q+ + + GL ++ + + L +A
Sbjct: 364 IPDEITVRSLLCACTSPSELYQGMQVHGYI-NKMGLDLDVPVCNTLLTMYAKCSELRDAI 422
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNI 361
E+ + ++++L AC H D EE+ L+ M P ++ L+N+
Sbjct: 423 FFFEEMRCNADLVSWNAILTACMRH---DQAEEVFRLLKLMCISQHRPDYITLTNV 475
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 141/316 (44%), Gaps = 42/316 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +ISAC+ L L+ G+++H LK + D + +++MY KC L A VF +
Sbjct: 65 TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+++W S+I+G+SQ G A
Sbjct: 125 P-ERNVVSWT-----------------------------------SVIAGYSQNGQGGNA 148
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ + +M +G++P S++ AC+ L + LG++ H HV++++ ALISM
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISM 208
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG-EYESAVEIFDLMQQEKVKPNS 251
Y K A F + + D W +MI+G+ + G E E+ +++ Q PN
Sbjct: 209 YTKSNLIIDALDVFSRMATR--DLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEARELI 310
F +V SAC + Q+ M FGL + GC + D+ + G L AR +
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHG-MSIKFGL-GRDVFAGCSLCDMYAKCGLLSCARVVF 324
Query: 311 RELPEPTVSVYHSLLG 326
++ P + +++++
Sbjct: 325 YQIGRPDLVAWNAIIA 340
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 90/168 (53%), Gaps = 4/168 (2%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
N I+ + + EA K FE +Q TG +L ++SAC+ L +L+ GK+ H H++
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++ + D ++ +++MY KC A++ FD + + W ++I+GY +NG+ +A
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFD--AMPERNVVSWTSVIAGYSQNGQGGNA 148
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFG 282
+E + M Q V P+ +F +++ AC G + Q+ ++ +FG
Sbjct: 149 LEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFG 196
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLP 63
L +PN VTF+ V++AC+ + ++ G +++G K + T + +VD+ + GCL
Sbjct: 564 LDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLN 623
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
A ++ +I+ W T++A +G + E + K DP+
Sbjct: 624 EAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENI----LKIDPSN 671
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 227/391 (58%), Gaps = 15/391 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ VT SV+SACA++ ++ G+Q+H +K ++ ++D ++G AL+DMY KC + A
Sbjct: 249 EPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEAR 308
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F ++ R++++ +M++G + + A +F + D TWN++I+G +Q
Sbjct: 309 IIF-DMMPIRSVVSETSMVSGYAKASKVKVARYMFSNM----MVKDVITWNALIAGCTQN 363
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------N 180
G EA LF ++ + P+ ++L+ACA+L+ L+LG++ H HV++ +
Sbjct: 364 GENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGED 423
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MYMKCG R F K D WNAMI GY +NG A+E+F
Sbjct: 424 SDVFVGNSLIDMYMKCGSVENGCRVFQHMLEK--DCVSWNAMIVGYAQNGFGNKALEVFC 481
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + P+ + + VL AC HAG +D+ F M GL P ++H+ CMVDLLGR+
Sbjct: 482 KMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRA 541
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L+EA+ LI E+ +P V+ SLL AC H N LGE + KL E++PEN P+V+LS
Sbjct: 542 GYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLS 601
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA W++V R+R+++ R + K PG S
Sbjct: 602 NMYAENRDWKNVVRVRKLMRQRGVVKQPGCS 632
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 159/309 (51%), Gaps = 7/309 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F +++ CA + +VH +K S+T I L+D+Y KCGC+ A +F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RNI +WN++I +G + A+ +FE + + D +WNSMISGF Q G
Sbjct: 78 DRML-ERNIFSWNSIICAFTKSGFLDDAVHIFEKMP----QVDQCSWNSMISGFEQHGRF 132
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F +M G + + S LSACA L LKLG + H V R++ D M +AL
Sbjct: 133 DEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSAL 192
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG+ +A+ FD+ ++ WN++I+ Y +NG + A++IF M + V+P
Sbjct: 193 VDMYSKCGRVEYAQSVFDEMTVRS--RVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEP 250
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V+SAC + + QI + + ++D+ + R++EAR +
Sbjct: 251 DEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARII 310
Query: 310 IRELPEPTV 318
+P +V
Sbjct: 311 FDMMPIRSV 319
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 216/384 (56%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S C+ L L+ G+QVH ++K+ +D + + L+DMY KCG + A
Sbjct: 415 QPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQI 474
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F N++T + D WNSMISG +
Sbjct: 475 IF-------NMMT-----------------------------ERDVVCWNSMISGLAIHS 498
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF F++M+ GM P+ S++++CA LS++ G++ H V++ +++ + +
Sbjct: 499 LNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGS 558
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG AR FF+ +K + WN MI GY +NG E AVE+F+ M K
Sbjct: 559 SLIDMYAKCGNMDDARLFFNCMIVK--NIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQ 616
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+S +F+AVL+ C H+G VD+A+ F M+ ++G++P EH+ C++D LGR+GR E
Sbjct: 617 KPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVV 676
Query: 308 ELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I ++P ++ + LL AC H N++LGE A L ++P+NP+P+V+LSNIYA LG
Sbjct: 677 AVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLG 736
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
R D +R +++ R + K G S
Sbjct: 737 RHGDASAVRALMSSRGVVKGRGYS 760
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 43/335 (12%)
Query: 12 VTFISVISACASLLY--------LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
V SV+ ACA ++ + +H L ++ SD +G +L+DMY K +
Sbjct: 244 VAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMD 303
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-------------- 109
A VF+ + S +I++WN ++ G G E+A+E+ + + GF
Sbjct: 304 EAMKVFESMS-SVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASC 362
Query: 110 -----------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
KP TWN+++SG+ Q + + +LF +MQ + P +
Sbjct: 363 IKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLA 422
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+LS C+ L L+LGK+ H ++ L+ D +A+ LI MY KCGQ A+ F+ +
Sbjct: 423 VILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER 482
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN+MISG + E A + F M++ + P +S+ +++++C + + Q
Sbjct: 483 --DVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQ 540
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
I + D G ++D+ + G +D+AR
Sbjct: 541 IHAQVLKD-GYDQNVYVGSSLIDMYAKCGNMDDAR 574
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 139/318 (43%), Gaps = 51/318 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P + T SV+SAC ++ L GR+ HGL +K+ + + L+ MY KCG + A +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRL 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + S N +++ M+ G+ +G + A+ LF ++ + DP
Sbjct: 200 FDWMS-SPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVA------------- 245
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------LSALKLGKETHGHVIRADLN 180
V+SVL ACA A++L + H V+R +
Sbjct: 246 ----------------------VSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFD 283
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D+ + +LI MY K + A + F+ + WN +++GYG+ G YE A+E+ D
Sbjct: 284 SDQHVGNSLIDMYAKGMKMDEAMKVFES--MSSVSIVSWNILVTGYGQLGCYERALEVLD 341
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
LMQ+ +PN ++ +L++C A V A +F + KP + ++ G+
Sbjct: 342 LMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIS-----KPSVTTWNTLLSGYGQE 396
Query: 301 GRLDEARELIRELPEPTV 318
+ EL R + V
Sbjct: 397 ELHQDTIELFRRMQHQNV 414
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 166/352 (47%), Gaps = 34/352 (9%)
Query: 44 SDTMIGTALVDMYLKCGCLPC-AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+DT + LV++Y G LPC A F+ L N+ ++N I+ G A +L
Sbjct: 43 ADTFLLNRLVELYSLSG-LPCHALRAFRALP-RPNVYSYNAAISAACRAGDLAAARDLL- 99
Query: 103 GLAHEGFKPD--PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
G PD +WN++I+ ++ EA +++ M G+ P+ + SVLSAC
Sbjct: 100 -----GRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGA 154
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
++AL G+ HG ++ L+ ++ + L+ MY KCG + A R FD P++ +F
Sbjct: 155 VAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMS-SPNEVSF-T 212
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA----GHVDKALQIFTM 276
AM+ G ++G + A+ +F M + ++ + + +VL AC A +V +A+++
Sbjct: 213 AMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQS 272
Query: 277 MDDDF---GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL---GACWC 330
+ G Q ++D+ + ++DEA ++ + ++ ++ L+ G C
Sbjct: 273 IHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGC 332
Query: 331 HLNSDLGEEMAMKLQEMEPEN---PTPFVILSNIYAGLGRWEDVGRIRQMIN 379
+ E A+++ ++ E+ P V SN+ A + DV R M +
Sbjct: 333 Y-------ERALEVLDLMQESGFEPNE-VTYSNMLASCIKARDVPSARAMFD 376
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 213/372 (57%), Gaps = 15/372 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS + SV+ A + L +L G++ HG L+ D +GT+L+DMY+K L A
Sbjct: 908 KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQA 967
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K +RNI WN++++G G E A+ L + EG KPD TWN MISG++ G
Sbjct: 968 VFDNMK-NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 1026
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+AF +P+ +T +L ACA LS L+ GKE H IR +D +AT
Sbjct: 1027 CARKAF-----------MPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVAT 1075
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY K A + F + + K A WN MI G+ G + A+ +F+ MQ+ V
Sbjct: 1076 ALIDMYSKSSSLKNAHKVFRRIQNKT--LASWNCMIMGFAIFGLGKEAISVFNEMQKVGV 1133
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P++ +F A+LSAC ++G + + + F M D+ + P+ EH+ CMVDLLGR+G LDEA
Sbjct: 1134 GPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAW 1193
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P +P +++ +LLG+C H N E A L ++EP N ++++ N+Y+
Sbjct: 1194 DLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYILMMNLYSIFN 1253
Query: 367 RWEDVGRIRQMI 378
RWED+ +R+++
Sbjct: 1254 RWEDMDHLRELM 1265
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 161/339 (47%), Gaps = 28/339 (8%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
+ T + V+ AC + L +Q+HG + SD + L+ MY K G L A VF
Sbjct: 775 TATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFD 834
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ +RN +WN+MI+ G A LF L KPD TWN ++SG G +
Sbjct: 835 SME-NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 893
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
E + ++MQ G P+ +TSVL A ++L L +GKETHG+V+R + D + T+LI
Sbjct: 894 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 953
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-- 248
MY+K A+ FD +K + WN+++SGY G +E A+ + + M++E +K
Sbjct: 954 DMYVKNHSLXSAQAVFDN--MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 1011
Query: 249 ----------------------PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
PNSAS +L AC + K +I + + G
Sbjct: 1012 LVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRN-GFIED 1070
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ +S L A ++ R + T++ ++ ++
Sbjct: 1071 VFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMI 1109
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S + + C ++ + G ++HG +K D + AL++ Y +C L A+ VF
Sbjct: 673 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 732
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +L WN I +LN +SEK + E
Sbjct: 733 HEMPNPEALL-WNEAI---ILNLQSEKLQKGVE--------------------------- 761
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
LF KMQ + + + VL AC + AL K+ HG+V R L+ D S+ L
Sbjct: 762 -----LFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 816
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
ISMY K G+ ARR FD E + + + WN+MIS Y G A +F ++ +KP
Sbjct: 817 ISMYSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 874
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ ++ +LS G+ ++ L I M + G KP ++ + G L+ +E
Sbjct: 875 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 932
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 11/266 (4%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGF-SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
AM + GL K WNS + F S G ++F+++ G+V + + L
Sbjct: 627 AMVFYVGLPRNYLK-----WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 681
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
C + + LG E HG +I+ + D + AL++ Y +C A + F E+ +
Sbjct: 682 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFH--EMPNPE 739
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN I ++ + + VE+F MQ +K +A+ V VL ACG G ++ A QI
Sbjct: 740 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 799
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--ACWCHLN 333
+ FGL ++ + ++G+L+ AR + + S ++S++ A LN
Sbjct: 800 YV-FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 858
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILS 359
++ +M+P+ T +LS
Sbjct: 859 DAWSLFYELESSDMKPDIVTWNCLLS 884
>gi|297599966|ref|NP_001048246.2| Os02g0769900 [Oryza sativa Japonica Group]
gi|46805413|dbj|BAD16915.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255671273|dbj|BAF10160.2| Os02g0769900 [Oryza sativa Japonica Group]
Length = 438
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 218/388 (56%), Gaps = 13/388 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L + VH LK+ S ++ T LV Y
Sbjct: 10 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFP-SHLLLSTCLVRFYFASRLPHL 68
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+ +T+NT+I+G+M NG A E+F+G+ PD +W ++I G
Sbjct: 69 ALQLFDAMP-VRSAVTYNTVISGLMRNGLVAAAFEVFDGMP----APDKVSWTALIDGCV 123
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M G+ P + +V+SACA++ AL LG H V+R L ++
Sbjct: 124 KNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVR 183
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ AR+ F ++ WN+MI G+ NG AVE F+ M++
Sbjct: 184 IANSLIDMYARCGQVELARQVFSG--MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 241
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F VL+AC H G D+ L+ + +M ++G+ + EH+GC+VDLLGRSG+L+
Sbjct: 242 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLE 301
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H + + E++ L E++P +V+LSNIYA
Sbjct: 302 EAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYA 361
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+W+ G++R ++ R L K PG SA
Sbjct: 362 AVGKWDGAGKVRSLMKARGLRKRPGYSA 389
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT I+VISACA + L G VH L ++ + + I +L+DMY +CG + A
Sbjct: 144 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R +++WN+MI G NGR A+E FE + EGFKPD T+ +++ S G
Sbjct: 204 VFSGMR-KRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGG 262
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + ++ M++ G+ ++ CV +L L +E V + +E
Sbjct: 263 LTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQL------EEAMRVVTTMPMRPNE 316
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ G A + E+ P A + + + Y G+++ A ++ LM
Sbjct: 317 VVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLM 376
Query: 243 QQEKVK 248
+ ++
Sbjct: 377 KARGLR 382
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 145 VPSLKCVTSVLSACADLS----ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
VP+ + +VLSACAD A +L H V++ ++T L+ Y P
Sbjct: 9 VPNDVTLLTVLSACADSPSSPLARRLALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPH 67
Query: 201 WARRFFDQFEIK-----------------------------PDDPAFWNAMISGYGRNGE 231
A + FD ++ D W A+I G +NG
Sbjct: 68 LALQLFDAMPVRSAVTYNTVISGLMRNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGR 127
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
++ A++ F M + V+P+ + +AV+SAC G + + + ++ GL+
Sbjct: 128 HDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQ-GLERNVRIAN 186
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ R G+++ AR++ + + TV ++S++
Sbjct: 187 SLIDMYARCGQVELARQVFSGMRKRTVVSWNSMI 220
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 218/383 (56%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VTF +V+ ACA L +L G+++H + ++I SD + +L+DMY KCGCL A NV
Sbjct: 312 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 371
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F NT + D ++N +I G+S+
Sbjct: 372 F------------NTS-------------------------RKDEVSYNILIIGYSETDD 394
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++ LF +M+ G P + V+SACA+L+ALK GKE HG +R L ++ +
Sbjct: 395 CLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNS 454
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y KCG+ A R F+Q K D A WN MI GYG GE E+A+ +F+ M+ + V+
Sbjct: 455 LLDFYTKCGRIDIACRLFNQILFK--DVASWNTMILGYGMIGELETAISMFEAMRDDTVQ 512
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVLSAC H G V++ Q F+ M L+P + H+ CMVDLLGR+G ++EA +
Sbjct: 513 YDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAK 571
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI++LP P +++ +LLGAC + N +LG A L E++P++ +++LSNIYA GR
Sbjct: 572 LIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGR 631
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ +IR+++ R K PG S
Sbjct: 632 WDEANKIRELMKSRGAKKNPGCS 654
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 145/324 (44%), Gaps = 52/324 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVT S++ L + G+++HG ++++ ++D I +L+DMY K G A
Sbjct: 210 QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAST 269
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L RNI++ WN+MI+ ++
Sbjct: 270 IFHNLD-RRNIVS-----------------------------------WNAMIANYALNR 293
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA + +MQ TG P+ T+VL ACA L L GKE H +R L D ++
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG AR F+ D +N +I GY + ++ +F M+
Sbjct: 354 SLIDMYAKCGCLHSARNVFNT---SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 410
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF------GCMVDLLGRSG 301
KP+ SFV V+SAC + + + ++ G+ + + ++D + G
Sbjct: 411 KPDVVSFVGVISACANLAALKQGKEV-------HGVALRNHLYSHLFVSNSLLDFYTKCG 463
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
R+D A L ++ V+ +++++
Sbjct: 464 RIDIACRLFNQILFKDVASWNTMI 487
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 131/319 (41%), Gaps = 39/319 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN V+ IS++ A+L + R++H ++K+ S ALVD Y KCG +
Sbjct: 109 KPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQ 168
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +E + + +WNS+I+G + G
Sbjct: 169 VF------------------------------------NETVEKNEVSWNSIINGLACKG 192
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++A F M G P+ ++S+L +L K GKE HG +R D +A
Sbjct: 193 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 252
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K G + A F + + + WNAMI+ Y N A+ MQ+
Sbjct: 253 SLIDMYAKSGHSTEASTIFHNLDRR--NIVSWNAMIANYALNRLPLEAIRFVIQMQETGE 310
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +F VL AC G + +I M GL ++D+ + G L AR
Sbjct: 311 CPNAVTFTNVLPACARLGFLGPGKEIHA-MGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR 369
Query: 308 ELIRELPEPTVSVYHSLLG 326
+ + VS ++G
Sbjct: 370 NVFNTSRKDEVSYNILIIG 388
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+ V+F+ VISACA+L L+ G++VHG+ L+ S + +L+D Y KCG +
Sbjct: 408 LGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDI 467
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F ++ +++ +WNTMI G + G E A+ +FE + + + D ++ +++S S
Sbjct: 468 ACRLFNQIL-FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACS 526
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ ++ F +M + + P+ T ++ L +E + + + D +
Sbjct: 527 HGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDL---LGRAGFVEEAAKLIQQLPIAPDAN 583
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G RR + FE+KP ++ + + Y G ++ A +I +LM+
Sbjct: 584 IWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMK 643
Query: 244 QEKVKPN 250
K N
Sbjct: 644 SRGAKKN 650
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 14/190 (7%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
VL C+D + G E HG V + + D + L+ +Y CG + ARR FD E+
Sbjct: 16 VLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFD--EMPE 73
Query: 214 DDPAFWNAMISGYGRNGEYESAVE-IFDLMQQEKVKPNSASFVAVL--SACGHAGHVDKA 270
D WN +I NG+Y A F ++ + +KPN S +++L SA + +
Sbjct: 74 RDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRR 133
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL----- 325
+ +++ GL + +VD G+ G + ++ E E ++S++
Sbjct: 134 IHCYSV---KVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLAC 190
Query: 326 -GACWCHLNS 334
G CW LN+
Sbjct: 191 KGRCWDALNA 200
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 221/384 (57%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+ ACASL L+ GR++H TLK+ ++ + +AL+DMY KC LP A
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++I+G N + +A ELF+ + A+WNS+ISG++Q
Sbjct: 435 IFYSLP-QKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNV----ASWNSIISGYAQNR 489
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M ++G P +SVL ACA L +L++GK H +I+ + + + T
Sbjct: 490 QFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F +E+ + W AMI G NG E ++ +F+ M +
Sbjct: 550 ALSDMYAKSGDLDSSKRVF--YEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H+G V+ A+ F MM G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 TPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAE 666
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ ++ + + + +LL AC + N ++GE A +LQE++ +N +V+LSN+YA G
Sbjct: 667 DLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCG 726
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+D +R ++ L K G S
Sbjct: 727 KWKDAAEMRILMKGINLKKDGGCS 750
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 36/337 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN +T +SVI AC + GL +K + + +L+ +YL+ G A
Sbjct: 243 PNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARR 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E++ R++++W ++ G E A + + + + +W ++++ Q G
Sbjct: 303 MFDEME-VRDVVSWTALLDVYAELGDLEGARRVLDEMPER----NEVSWGTLVARHEQKG 357
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA L+ +M + G P++ C +SVL ACA L L+ G++ H ++ + + +++
Sbjct: 358 NAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSS 417
Query: 188 ALISMYMKCGQPSWARRFF----------------------------DQFEIKP-DDPAF 218
ALI MY KC Q A+ F + F+ P + A
Sbjct: 418 ALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS 477
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++ISGY +N ++ A++ F M P +F +VL AC ++ + +
Sbjct: 478 WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKI- 536
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
G+K + D+ +SG LD ++ + E+P+
Sbjct: 537 IKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPK 573
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGF 109
+V ++K G + A +F + R+++++ TM+ +M G A+EL+ L F
Sbjct: 154 MVREHVKAGDIVSARRLFDGMP-ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPF 212
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +MI+GF + +A +F +M S G+ P+ + SV+ AC L
Sbjct: 213 ------FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 170 THGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
G ++++ L+K+ + +LI++Y++ G ARR FD+ E++ D W A++ Y
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR--DVVSWTALLDVYAE 324
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G+ E A + D M + N S+ +++ G+ +A+ +++ M D G +P
Sbjct: 325 LGDLEGARRVLDEMPER----NEVSWGTLVARHEQKGNAKEAVSLYSQMLAD-GCRP--- 376
Query: 289 HFGCMVDLLGRSGRLDEAR 307
+ C +LG L + R
Sbjct: 377 NISCFSSVLGACASLQDLR 395
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G A + Q + F+ AMI+G+ N + A+ +F M
Sbjct: 183 TTMVDALMKRGSVRDAVELYRQCPLC--SVPFFTAMIAGFVLNELPKDALGVFHEMLSCG 240
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRS 300
V PN + V+V+ AC AG D A+ I ++D + G++ ++ L R
Sbjct: 241 VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVR------NSLITLYLRK 294
Query: 301 GRLDEARELIRELPEPTVSVYHSLL 325
G D AR + E+ V + +LL
Sbjct: 295 GDADAARRMFDEMEVRDVVSWTALL 319
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 222/384 (57%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+ ACASL L+ GR++H TLK+ ++ + +AL+DMY KC LP A
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++I+G N + +A ELF+ + + A+WNS+ISG++Q
Sbjct: 435 IFYSLP-QKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNR 489
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M ++G P +SVL ACA L +L++GK H +I+ + + + T
Sbjct: 490 QFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F +E+ + W AMI G NG E ++ +F+ M +
Sbjct: 550 ALSDMYAKSGDLDSSKRVF--YEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H+G V+ A+ F MM G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 TPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAE 666
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ ++ + + + +LL AC + N ++GE A +LQE++ +N +V+LSN+YA G
Sbjct: 667 DLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCG 726
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+D +R ++ L K G S
Sbjct: 727 KWKDAAEMRILMKGINLKKDGGCS 750
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 36/337 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN +T +SVI AC + GL +K + + +L+ +YL+ G A
Sbjct: 243 PNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARR 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E++ R++++W ++ G E A + + + + +W ++++ Q G
Sbjct: 303 MFDEME-VRDVVSWTALLDVYAELGDLEGARRVLDEMPER----NEVSWGTLVARHEQKG 357
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA L+ +M + G P++ C +SVL ACA L L+ G++ H ++ + + +++
Sbjct: 358 NAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSS 417
Query: 188 ALISMYMKCGQPSWARRFF----------------------------DQFEIKP-DDPAF 218
ALI MY KC Q A+ F + F+ P + A
Sbjct: 418 ALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS 477
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++ISGY +N ++ A++ F M P +F +VL AC ++ + +
Sbjct: 478 WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKI- 536
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
G+K + D+ +SG LD ++ + E+P+
Sbjct: 537 IKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPK 573
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGF 109
+V ++K G + A +F + R+++++ TM+ +M G A+EL+ L F
Sbjct: 154 MVREHVKAGDIVSARRLFDGMP-ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPF 212
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +MI+GF + +A +F +M S G+ P+ + SV+ AC L
Sbjct: 213 ------FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 170 THGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
G ++++ L+K+ + +LI++Y++ G ARR FD+ E++ D W A++ Y
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR--DVVSWTALLDVYAE 324
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G+ E A + D M + N S+ +++ G+ +A+ +++ M D G +P
Sbjct: 325 LGDLEGARRVLDEMPER----NEVSWGTLVARHEQKGNAKEAVSLYSQMLAD-GCRP--- 376
Query: 289 HFGCMVDLLGRSGRLDEAR 307
+ C +LG L + R
Sbjct: 377 NISCFSSVLGACASLQDLR 395
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF--- 274
F+ AMI+G+ N + A+ +F M V PN + V+V+ AC AG D A+ I
Sbjct: 212 FFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLA 271
Query: 275 ---TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D + G++ ++ L R G D AR + E+ V + +LL
Sbjct: 272 MKSNLLDKNLGVR------NSLITLYLRKGDADAARRMFDEMEVRDVVSWTALL 319
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/383 (37%), Positives = 218/383 (56%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VTF +V+ ACA L +L G+++H + ++I SD + +L+DMY KCGCL A NV
Sbjct: 461 PNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNV 520
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F NT + D ++N +I G+S+
Sbjct: 521 F------------NTS-------------------------RKDEVSYNILIIGYSETDD 543
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++ LF +M+ G P + V+SACA+L+ALK GKE HG +R L ++ +
Sbjct: 544 CLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNS 603
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y KCG+ A R F+Q K D A WN MI GYG GE E+A+ +F+ M+ + V+
Sbjct: 604 LLDFYTKCGRIDIACRLFNQILFK--DVASWNTMILGYGMIGELETAISMFEAMRDDTVQ 661
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVLSAC H G V++ Q F+ M L+P + H+ CMVDLLGR+G ++EA +
Sbjct: 662 YDLVSYIAVLSACSHGGLVERGWQYFSEMLAQ-RLEPTEMHYTCMVDLLGRAGFVEEAAK 720
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI++LP P +++ +LLGAC + N +LG A L E++P++ +++LSNIYA GR
Sbjct: 721 LIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGR 780
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ +IR+++ R K PG S
Sbjct: 781 WDEANKIRELMKSRGAKKNPGCS 803
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 40/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVT S++ L + G+++HG ++++ ++D I +L+DMY K G A
Sbjct: 359 QPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEAST 418
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L RNI++ WN+MI+ ++
Sbjct: 419 IFHNLD-RRNIVS-----------------------------------WNAMIANYALNR 442
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA + +MQ TG P+ T+VL ACA L L GKE H +R L D ++
Sbjct: 443 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 502
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG AR F+ D +N +I GY + ++ +F M+
Sbjct: 503 SLIDMYAKCGCLHSARNVFNT---SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGK 559
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ SFV V+SAC + + + ++ + + L ++D + GR+D A
Sbjct: 560 KPDVVSFVGVISACANLAALKQGKEVHGVALRNH-LYSHLFVSNSLLDFYTKCGRIDIAC 618
Query: 308 ELIRELPEPTVSVYHSLL 325
L ++ V+ +++++
Sbjct: 619 RLFNQILFKDVASWNTMI 636
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 131/319 (41%), Gaps = 39/319 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN V+ IS++ A+L + R++H ++K+ S ALVD Y KCG +
Sbjct: 258 KPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQ 317
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +E + + +WNS+I+G + G
Sbjct: 318 VF------------------------------------NETVEKNEVSWNSIINGLACKG 341
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++A F M G P+ ++S+L +L K GKE HG +R D +A
Sbjct: 342 RCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIAN 401
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K G + A F + + + WNAMI+ Y N A+ MQ+
Sbjct: 402 SLIDMYAKSGHSTEASTIFHNLDRR--NIVSWNAMIANYALNRLPLEAIRFVIQMQETGE 459
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +F VL AC G + +I M GL ++D+ + G L AR
Sbjct: 460 CPNAVTFTNVLPACARLGFLGPGKEIHA-MGVRIGLTSDLFVSNSLIDMYAKCGCLHSAR 518
Query: 308 ELIRELPEPTVSVYHSLLG 326
+ + VS ++G
Sbjct: 519 NVFNTSRKDEVSYNILIIG 537
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 5/247 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+ V+F+ VISACA+L L+ G++VHG+ L+ S + +L+D Y KCG +
Sbjct: 557 LGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDI 616
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F ++ +++ +WNTMI G + G E A+ +FE + + + D ++ +++S S
Sbjct: 617 ACRLFNQIL-FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACS 675
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ ++ F +M + + P+ T ++ L +E + + + D +
Sbjct: 676 HGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDL---LGRAGFVEEAAKLIQQLPIAPDAN 732
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G RR + FE+KP ++ + + Y G ++ A +I +LM+
Sbjct: 733 IWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMK 792
Query: 244 QEKVKPN 250
K N
Sbjct: 793 SRGAKKN 799
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 131/319 (41%), Gaps = 48/319 (15%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ C+ + G +VHG+ K+ +D +G L+ +Y CG L A +F E+
Sbjct: 161 TFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEM 220
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R++++WNT+I + +NG +A +
Sbjct: 221 P-ERDVVSWNTIIGLLSVNGDYTEARNYY------------------------------- 248
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
F + + + P+L V S+L A L ++ + H + ++ L+ + AL+
Sbjct: 249 ---FWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDA 305
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG + F+ E + WN++I+G G A+ F +M +PNS
Sbjct: 306 YGKCGSVKALWQVFN--ETVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSV 363
Query: 253 SFVAVLSA-----CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ ++L C AG K + F+M G + ++D+ +SG EA
Sbjct: 364 TISSILPVLVELECFKAG---KEIHGFSM---RMGTETDIFIANSLIDMYAKSGHSTEAS 417
Query: 308 ELIRELPEPTVSVYHSLLG 326
+ L + +++++
Sbjct: 418 TIFHNLDRRNIVSWNAMIA 436
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 15 ISVISACASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF-QEL 72
I++++ C+ + L +QVH L L + +L+ Y K ++F Q
Sbjct: 58 INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTF 117
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ R WNT+I + WN F+
Sbjct: 118 QNCRTAFLWNTLI------------------------RAHSIAWNGT----------FDG 143
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
F+ + +M G+ VL C+D + G E HG V + + D + L+ +
Sbjct: 144 FETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLML 203
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEIFDLMQQEKVKPNS 251
Y CG + ARR FD E+ D WN +I NG+Y E+ F ++ + +KPN
Sbjct: 204 YGNCGFLNDARRLFD--EMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNL 261
Query: 252 ASFVAVL--SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
S +++L SA + + + +++ GL + +VD G+ G + ++
Sbjct: 262 VSVISLLPISAALEDEEMTRRIHCYSV---KVGLDSQVTTCNALVDAYGKCGSVKALWQV 318
Query: 310 IRELPEPTVSVYHSLL------GACWCHLNS 334
E E ++S++ G CW LN+
Sbjct: 319 FNETVEKNEVSWNSIINGLACKGRCWDALNA 349
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 222/384 (57%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+ ACASL L+ GR++H TLK+ ++ + +AL+DMY KC LP A
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++I+G N + +A ELF+ + + A+WNS+ISG++Q
Sbjct: 435 IFYSLP-QKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNR 489
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M ++G P +SVL ACA L +L++GK H +I+ + + + T
Sbjct: 490 QFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F +E+ + W AMI G NG E ++ +F+ M +
Sbjct: 550 ALSDMYAKSGDLDSSKRVF--YEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H+G V+ A+ F MM G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 TPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAE 666
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ ++ + + + +LL AC + N ++GE A +LQE++ +N +V+LSN+YA G
Sbjct: 667 DLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCG 726
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+D +R ++ L K G S
Sbjct: 727 KWKDAAEMRILMKGINLKKDGGCS 750
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 36/337 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN +T +SVI AC + GL +K + + +L+ +YL+ G A
Sbjct: 243 PNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARR 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E++ R++++W ++ G E A + + + + +W ++++ Q G
Sbjct: 303 MFDEME-VRDVVSWTALLDVYAELGDLEGARRVLDEMPER----NEVSWGTLVARHEQKG 357
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA L+ +M + G P++ C +SVL ACA L L+ G++ H ++ + + +++
Sbjct: 358 NAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSS 417
Query: 188 ALISMYMKCGQPSWARRFF----------------------------DQFEIKP-DDPAF 218
ALI MY KC Q A+ F + F+ P + A
Sbjct: 418 ALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS 477
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++ISGY +N ++ A++ F M P +F +VL AC ++ + +
Sbjct: 478 WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKI- 536
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
G+K + D+ +SG LD ++ + E+P+
Sbjct: 537 IKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPK 573
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGF 109
+V ++K G + A +F + R+++++ TM+ +M G A+EL+ L F
Sbjct: 154 MVREHVKAGDIVSARRLFDGMP-ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPF 212
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +MI+GF + +A +F +M S G+ P+ + SV+ AC L
Sbjct: 213 ------FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 170 THGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
G ++++ L+K+ + +LI++Y++ G ARR FD+ E++ D W A++ Y
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR--DVVSWTALLDVYAE 324
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G+ E A + D M + N S+ +++ G+ +A+ +++ M D G +P
Sbjct: 325 LGDLEGARRVLDEMPER----NEVSWGTLVARHEQKGNAKEAVSLYSQMLAD-GCRP--- 376
Query: 289 HFGCMVDLLGRSGRLDEAR 307
+ C +LG L + R
Sbjct: 377 NISCFSSVLGACASLQDLR 395
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G A + Q + F+ AMI+G+ N + A+ +F M
Sbjct: 183 TTMVDALMKRGSVRDAVELYRQCPLC--SVPFFTAMIAGFVLNELPKDALGVFHEMLSCG 240
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRS 300
V PN + V+V+ AC AG D A+ I ++D + G++ ++ L R
Sbjct: 241 VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVR------NSLITLYLRK 294
Query: 301 GRLDEARELIRELPEPTVSVYHSLL 325
G D AR + E+ V + +LL
Sbjct: 295 GDADAARRMFDEMEVRDVVSWTALL 319
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 213/386 (55%), Gaps = 37/386 (9%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PN T+ +I AC ++ G+Q+H LK +D L+ MY+
Sbjct: 89 SVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVN------- 141
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
FQ L E+A +F+ + + +WN+MI+ + Q
Sbjct: 142 ---FQSL----------------------EQARRVFDNMPQR--DRNSVSWNAMIAAYVQ 174
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
EAF LF++M+ +V S+LSAC L AL+ GK HG++ ++ + D +
Sbjct: 175 SNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKL 234
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT +I MY KCG A F+ E+ + WN MI G +G+ E+A+E+F M++E
Sbjct: 235 ATTVIDMYCKCGCLEKASEVFN--ELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE 292
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ +FV VLSAC H+G V++ F M + GLKP EHFGCMVDLLGR+G L+E
Sbjct: 293 MVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEE 352
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR+LI E+P P V +L+GAC H N++LGE++ K+ E+EP N +V+L+N+YA
Sbjct: 353 ARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYAS 412
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV ++R+++NDR + K PG S
Sbjct: 413 AGRWEDVAKVRKLMNDRGVKKAPGFS 438
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG+ + + ++ +M + P+ ++ AC A++ GK+ H HV++
Sbjct: 67 SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D LI MY+ ARR FD + + WNAMI+ Y ++ A +FD
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ E V + ++LSAC G +++ I ++ G++ + ++D+ +
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKS-GIELDSKLATTVIDMYCKC 245
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G L++A E+ ELP+ +S ++ ++G H + E+ +EME E P
Sbjct: 246 GCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIEL---FKEMEREMVAP 296
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 224/384 (58%), Gaps = 11/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +F S +SACA++ ++ GR +H L +K Q ++ + L+ MY KCG + +V
Sbjct: 553 PSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHV 612
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ ++ ++WN++I+G+ N + A +FE + K D +W ++IS + Q G
Sbjct: 613 FRTIR-VKDTVSWNSLISGLSENYMLDDARVVFEKMP----KRDVVSWTAIISAYVQAGH 667
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LF M + G+ P+ VTS+LSAC +L A+KLG++ H + + + + +
Sbjct: 668 GEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNS 727
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI+MY KCG F FE P+ D WNA++ G +NG + A++IF+ M+ E +
Sbjct: 728 LITMYFKCGYEDG----FCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGI 783
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ SF+ VL AC HAG VD+ F M +G+ P H+ CMVDLLGR+G L EA
Sbjct: 784 LPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAE 843
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI +P +P ++ +LLGAC H N +LG+ +A +L +M +V+LSN++A G
Sbjct: 844 ALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQG 903
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ V IR+++ D+ LTK PGIS
Sbjct: 904 MWDKVAEIRKLMKDQGLTKEPGIS 927
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 178/438 (40%), Gaps = 103/438 (23%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ F+ V+SA L L+ + + +K + D ++G+A+++ Y + G L A +
Sbjct: 359 PDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF 418
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH---------------------- 106
F+ + RN +W TMIA GR + A++L+E +
Sbjct: 419 FETMP-ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKA 477
Query: 107 -----EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM---------------------- 139
E P+ WN++I+G++Q GM EA LF+KM
Sbjct: 478 RLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESR 537
Query: 140 ---------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+G VPS TS LSACA++ +++G+ H I+ + + LI
Sbjct: 538 EALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLI 597
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
SMY KCG F +K D WN++ISG N + A +F+ M + V
Sbjct: 598 SMYAKCGNVEDGSHVFRTIRVK--DTVSWNSLISGLSENYMLDDARVVFEKMPKRDV--- 652
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ-------------------EHFG 291
S+ A++SA AGH + AL +F M G+KP Q E F
Sbjct: 653 -VSWTAIISAYVQAGHGEVALDLFLDMLAR-GIKPNQLTVTSLLSACGNLGAIKLGEQFH 710
Query: 292 CMVDLLGRSGRLDEARELI---------------RELPEPTVSVYHSLLGACWCHLNSDL 336
++ LG L LI E+PE + ++++L C + L
Sbjct: 711 ALIFKLGFDTFLFVGNSLITMYFKCGYEDGFCVFEEMPEHDLITWNAVLVGC---AQNGL 767
Query: 337 GEEMAMKLQEMEPENPTP 354
G+E ++ME E P
Sbjct: 768 GKEAIKIFEQMEVEGILP 785
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 18/266 (6%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++ G L A +F E+ +N+ +WN+++ G R +A ELF+ +
Sbjct: 268 NAMISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTGYCHCYRMSEARELFDQMPER-- 324
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +W MISG+ + +EA+ +F KM T P VLSA L L+L
Sbjct: 325 --NSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGS 382
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGR 228
I+ D + +A+++ Y + G A F FE P+ + W MI+ + +
Sbjct: 383 LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHF---FETMPERNEYSWTTMIAAFAQ 439
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G + A+++++ + ++ V A+ A+++A G + KA IF D L P
Sbjct: 440 CGRLDDAIQLYERVPEQTV----ATKTAMMTAYAQVGRIQKARLIF-----DEILNPNVV 490
Query: 289 HFGCMVDLLGRSGRLDEARELIRELP 314
+ ++ ++G L EA++L +++P
Sbjct: 491 AWNAIIAGYTQNGMLKEAKDLFQKMP 516
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 40/273 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T S++SAC +L ++ G Q H L K+ + +G +L+ MY KCG
Sbjct: 684 KPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFC 742
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ +++TWN ++ G NG ++A+++FE + EG PD ++ ++ S G
Sbjct: 743 VFEEMP-EHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAG 801
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E + F M Q G++P +
Sbjct: 802 LVDEGWAHFNSMTQKYGIMPLV-----------------------------------YHY 826
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ + + G S A + +KPD W A++ + E + + + Q
Sbjct: 827 TCMVDLLGRAGYLSEAEALIENMPVKPDS-VIWEALLGACRIHRNVELGQRVAERLFQ-M 884
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
KP SA++V + + G DK +I +M D
Sbjct: 885 TKPKSATYVLLSNLFASQGMWDKVAEIRKLMKD 917
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 126/315 (40%), Gaps = 76/315 (24%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
Q D + ++++ Y + G + A +F G +NI TW ++ G GR E+A E+FE
Sbjct: 199 QRDVVSWNSMINGYSQNGKVDEARLLFDAFVG-KNIRTWTILLTGYAKEGRIEEAREVFE 257
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + +WN+MISG+ Q G A KLF++M
Sbjct: 258 SMTER----NVVSWNAMISGYVQNGDLKNARKLFDEMPE--------------------- 292
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
K+ + ++++ Y C + S AR FDQ + + W M
Sbjct: 293 ------------------KNVASWNSVVTGYCHCYRMSEARELFDQ--MPERNSVSWMVM 332
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA-------------------CGH 263
ISGY +Y A ++F M + +P+ + FV VLSA G+
Sbjct: 333 ISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGY 392
Query: 264 AGHVDKALQIFTMMDDD---------FGLKPKQEHFG--CMVDLLGRSGRLDEARELIRE 312
G V I + F P++ + M+ + GRLD+A +L
Sbjct: 393 EGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYER 452
Query: 313 LPEPTVSVYHSLLGA 327
+PE TV+ +++ A
Sbjct: 453 VPEQTVATKTAMMTA 467
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 62/252 (24%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
NT I + GR E+A +F +E + D +WNSMI+G+SQ G EA LF+
Sbjct: 175 NTRIQELGRLGRVEEARRVF----NEMIQRDVVSWNSMINGYSQNGKVDEARLLFD---- 226
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSW 201
A + K+ T L++ Y K G+
Sbjct: 227 -----------------------------------AFVGKNIRTWTILLTGYAKEGRIEE 251
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
AR F+ + + WNAMISGY +NG+ ++A ++FD M ++ N AS+ +V++
Sbjct: 252 AREVFES--MTERNVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNSVVTGY 305
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD--EARELI----RELPE 315
H + +A ++F M P++ MV + G D EA ++ R +
Sbjct: 306 CHCYRMSEARELFDQM-------PERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVAR 358
Query: 316 PTVSVYHSLLGA 327
P S++ +L A
Sbjct: 359 PDQSIFVVVLSA 370
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 210/349 (60%), Gaps = 8/349 (2%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ +++ A++ Y++C + A +F+ + +N+ +WNTMI G NG +A F+
Sbjct: 294 EKNSVSWNAIIAGYVQCKRMDQARELFEAMP-CQNVSSWNTMITGYAQNGDIAQARNFFD 352
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D +W ++I+G++Q G EA LF +M+ G + TS LS CA+++
Sbjct: 353 RMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 408
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
AL+LGK+ HG V++A L + AL+ MY KCG A F+ E K + WN M
Sbjct: 409 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK--EVVSWNTM 466
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I+GY R+G + A+ +F+ M++ + P+ + V VLSAC H G VDK + F M D+G
Sbjct: 467 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 526
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ +H+ CM+DLLGR+GRLD+A+ L++ +P EP + + +LLGA H N++LGE+ A
Sbjct: 527 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 586
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ EMEP+N +V+LSN+YA GRW DVGR+R + DR + K+PG S
Sbjct: 587 KMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 46/296 (15%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V++ +IS C L+ R L + D + A++ Y + G + A +F E
Sbjct: 112 VSWNVMISGCVRYRNLRAAR----LLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDE 167
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------------------------GL 104
+ +N ++WN M+A + NGR E A LFE G+
Sbjct: 168 MP-CKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 226
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ D +WN+MISG++Q G EA +LFE+ V + T+++S L
Sbjct: 227 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEE----SPVRDVFTWTAMVSGYVQNGML 282
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+ V K+ A+I+ Y++C + AR F+ + + + WN MI+
Sbjct: 283 DEARR----VFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQ--NVSSWNTMIT 336
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
GY +NG+ A FD M Q +S S+ A+++ +G+ ++AL +F M D
Sbjct: 337 GYAQNGDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRD 388
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF S +S CA + L+ G+QVHG +K +S +G AL+ MY KCG + A+ VF
Sbjct: 393 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 452
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ + +++WNTMIAG +G ++A+ LFE + G PD T ++S S G+
Sbjct: 453 EGIE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVL 155
+ + F M Q G+ + K T ++
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMI 538
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 152/366 (41%), Gaps = 69/366 (18%)
Query: 37 TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEK 96
T + +D + + +++ G A +F + R+ ++WN MI+G + N +
Sbjct: 40 TSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMP-RRSSISWNAMISGCLSNDKFYL 98
Query: 97 AMELFEGLAHEGF---------------------------KPDPATWNSMISGFSQLGMR 129
A +LFE + + D +WN+M+SG++Q G
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 130 FEAFKLFEKM------QSTGMVPS------LKCVTSVLSACADLSALKLGKETHGHVIRA 177
EA ++F++M GM+ + ++ + + AD + G+V R
Sbjct: 159 KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRN 218
Query: 178 DL-----------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
L +DE +IS Y + G+ A+R F++ ++ D W AM+SGY
Sbjct: 219 RLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR--DVFTWTAMVSGY 276
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+NG + A +FD M ++ NS S+ A+++ +D+A ++F M P
Sbjct: 277 VQNGMLDEARRVFDGMPEK----NSVSWNAIIAGYVQCKRMDQARELFEAM-------PC 325
Query: 287 QE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL 344
Q + M+ ++G + +AR +P+ + +++ + S GEE
Sbjct: 326 QNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAG---YAQSGYGEEALHLF 382
Query: 345 QEMEPE 350
EM+ +
Sbjct: 383 VEMKRD 388
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 222/384 (57%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+ ACASL L+ GR++H TLK+ ++ + +AL+DMY KC LP A
Sbjct: 375 RPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQM 434
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++I+G N + +A ELF+ + + A+WNS+ISG++Q
Sbjct: 435 IFYSLP-QKNIVCWNSLISGYSNNSKMVEAEELFKKMPAR----NVASWNSIISGYAQNR 489
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M ++G P +SVL ACA L +L++GK H +I+ + + + T
Sbjct: 490 QFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGT 549
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F +E+ + W AMI G NG E ++ +F+ M +
Sbjct: 550 ALSDMYAKSGDLDSSKRVF--YEMPKRNDVAWTAMIQGLAENGFAEESILLFEDMISAGI 607
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H+G V+ A+ F MM G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 TPNEQTFLAILFACSHSGLVEHAMHYFEMM-QACGISPKAKHYTCMVDVLARAGHLAEAE 666
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ ++ + + + +LL AC + N ++GE A +LQE++ +N +V+LSN+YA G
Sbjct: 667 DLLLKIESKSEANSWAALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCG 726
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+D +R ++ L K G S
Sbjct: 727 KWKDAAEMRILMKGINLKKDGGCS 750
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 151/337 (44%), Gaps = 36/337 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN +T +SVI AC + GL +K + + +L+ +YL+ G A
Sbjct: 243 PNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARR 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E++ R++++W ++ G E A + + + + +W ++++ Q G
Sbjct: 303 MFDEME-VRDVVSWTALLDVYAELGDLEGARRVLDEMPER----NEVSWGTLVARHEQKG 357
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA L+ +M + G P++ C +SVL ACA L L+ G++ H ++ + + +++
Sbjct: 358 NAKEAVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSS 417
Query: 188 ALISMYMKCGQPSWARRFF----------------------------DQFEIKP-DDPAF 218
ALI MY KC Q A+ F + F+ P + A
Sbjct: 418 ALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVAS 477
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++ISGY +N ++ A++ F M P +F +VL AC ++ + +
Sbjct: 478 WNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKI- 536
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
G+K + D+ +SG LD ++ + E+P+
Sbjct: 537 IKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPK 573
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 125/259 (48%), Gaps = 20/259 (7%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGF 109
+V ++K G + A +F + R+++++ TM+ +M G A+EL+ L F
Sbjct: 154 MVREHVKAGDIVSARRLFDGMP-ERSVVSYTTMVDALMKRGSVRDAVELYRQCPLCSVPF 212
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +MI+GF + +A +F +M S G+ P+ + SV+ AC L
Sbjct: 213 ------FTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMS 266
Query: 170 THGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
G ++++ L+K+ + +LI++Y++ G ARR FD+ E++ D W A++ Y
Sbjct: 267 IVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVR--DVVSWTALLDVYAE 324
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G+ E A + D M + N S+ +++ G+ +A+ +++ M D G +P
Sbjct: 325 LGDLEGARRVLDEMPER----NEVSWGTLVARHEQKGNAKEAVSLYSQMLAD-GCRP--- 376
Query: 289 HFGCMVDLLGRSGRLDEAR 307
+ C +LG L + R
Sbjct: 377 NISCFSSVLGACASLQDLR 395
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G A + Q + F+ AMI+G+ N + A+ +F M
Sbjct: 183 TTMVDALMKRGSVRDAVELYRQCPLC--SVPFFTAMIAGFVLNELPKDALGVFHEMLSCG 240
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRS 300
V PN + V+V+ AC AG D A+ I ++D + G++ ++ L R
Sbjct: 241 VSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVR------NSLITLYLRK 294
Query: 301 GRLDEARELIRELPEPTVSVYHSLL 325
G D AR + E+ V + +LL
Sbjct: 295 GDADAARRMFDEMEVRDVVSWTALL 319
>gi|255540655|ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550507|gb|EEF51994.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 235/394 (59%), Gaps = 12/394 (3%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ L+ + F V+ +C+++L Q G VH +K+ S+ + +ALVDMY KC
Sbjct: 53 MQTSLALSLDPYVFPLVLKSCSAVLCPQLGTSVHAHIVKMGFLSNPFVASALVDMYGKCA 112
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C+ A +F E+ RN++ WN MI+ + R A+++F+ + E P+ +T+N++I
Sbjct: 113 CIFSARKLFDEIP-QRNVVVWNAMISLYTHSNRVRDALDMFDAMEIE---PNVSTFNALI 168
Query: 121 SGFSQLGMR---FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
G S G++ +A + KM+ G+ P+L + ++L AC ++AL L +E HG+ IR
Sbjct: 169 YGLS--GVKDGSIKAIAFYWKMRQLGLKPNLITLLALLPACVGIAALNLIREIHGYSIRN 226
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D+++ + + L+ Y +CG A F +K D W+++IS Y +GE ++A+E
Sbjct: 227 DIDRHPQLGSGLLDAYGRCGCLINASNVF--CGMKERDVVAWSSLISAYALHGEAKNALE 284
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IF M+ KV+P+ +F+AVL AC HAG D+AL FT M + + L+ +H+ C+VD+L
Sbjct: 285 IFRQMELAKVQPDDITFLAVLKACSHAGLADEALDYFTKMQEGYRLQAVSDHYSCLVDVL 344
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
R+GRL EA ++I+E+P + T + +LLGAC + +L E + L E+EP+NP +V
Sbjct: 345 SRAGRLYEAYKVIQEMPVKVTAKAWGALLGACRTYGEIELAEIVGRALFEIEPDNPANYV 404
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L+ IYA +GR+++ RIR+ + +R + PG S
Sbjct: 405 LLARIYASVGRYDEAQRIRREMKERGVKVSPGSS 438
>gi|46805412|dbj|BAD16914.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215704291|dbj|BAG93131.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 527
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 218/388 (56%), Gaps = 13/388 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L + VH LK+ S ++ T LV Y
Sbjct: 99 PNDVTLLTVLSACADSPSSPLARRLALSVHARVLKLFP-SHLLLSTCLVRFYFASRLPHL 157
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+ +T+NT+I+G+M NG A E+F+G+ PD +W ++I G
Sbjct: 158 ALQLFDAMP-VRSAVTYNTVISGLMRNGLVAAAFEVFDGMP----APDKVSWTALIDGCV 212
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M G+ P + +V+SACA++ AL LG H V+R L ++
Sbjct: 213 KNGRHDEAIDCFRAMLLDGVEPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVR 272
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ AR+ F ++ WN+MI G+ NG AVE F+ M++
Sbjct: 273 IANSLIDMYARCGQVELARQVFSG--MRKRTVVSWNSMIVGFAANGRCADAVEHFEAMRR 330
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F VL+AC H G D+ L+ + +M ++G+ + EH+GC+VDLLGRSG+L+
Sbjct: 331 EGFKPDAVTFTGVLTACSHGGLTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQLE 390
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H + + E++ L E++P +V+LSNIYA
Sbjct: 391 EAMRVVTTMPMRPNEVVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYA 450
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+W+ G++R ++ R L K PG SA
Sbjct: 451 AVGKWDGAGKVRSLMKARGLRKRPGYSA 478
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT I+VISACA + L G VH L ++ + + I +L+DMY +CG + A
Sbjct: 233 EPDYVTLIAVISACAEVGALGLGMWVHRLVVRQGLERNVRIANSLIDMYARCGQVELARQ 292
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R +++WN+MI G NGR A+E FE + EGFKPD T+ +++ S G
Sbjct: 293 VFSGMR-KRTVVSWNSMIVGFAANGRCADAVEHFEAMRREGFKPDAVTFTGVLTACSHGG 351
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + ++ M++ G+ ++ CV +L L +E V + +E
Sbjct: 352 LTDEGLRYYDLMRAEYGIAARMEHYGCVVDLLGRSGQL------EEAMRVVTTMPMRPNE 405
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ G A + E+ P A + + + Y G+++ A ++ LM
Sbjct: 406 VVLGALLAGCRMHGDVGMAEQLMQHLLELDPGGDANYVLLSNIYAAVGKWDGAGKVRSLM 465
Query: 243 QQEKVK 248
+ ++
Sbjct: 466 KARGLR 471
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 112 DPATWNSMISGFSQLG--MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS----ALK 165
D A+W S I+ ++ G A VP+ + +VLSACAD A +
Sbjct: 63 DVASWTSAIARPAKQGDLPAAAAALSAMLSSPAAPVPNDVTLLTVLSACADSPSSPLARR 122
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK------------- 212
L H V++ ++T L+ Y P A + FD ++
Sbjct: 123 LALSVHARVLKL-FPSHLLLSTCLVRFYFASRLPHLALQLFDAMPVRSAVTYNTVISGLM 181
Query: 213 ----------------PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
D W A+I G +NG ++ A++ F M + V+P+ + +A
Sbjct: 182 RNGLVAAAFEVFDGMPAPDKVSWTALIDGCVKNGRHDEAIDCFRAMLLDGVEPDYVTLIA 241
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
V+SAC G + + + ++ GL+ ++D+ R G+++ AR++ + +
Sbjct: 242 VISACAEVGALGLGMWVHRLVVRQ-GLERNVRIANSLIDMYARCGQVELARQVFSGMRKR 300
Query: 317 TVSVYHSLL 325
TV ++S++
Sbjct: 301 TVVSWNSMI 309
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 226/384 (58%), Gaps = 10/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF S++ AC + Q G Q+H K + ++ +L+ MY+ L A V
Sbjct: 123 PNNFTFPSLLIACRKI---QHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRV 179
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ +W ++I+G G ++A +F+ + + + A+WN+M++ + Q
Sbjct: 180 FHTIPHPDSV-SWTSLISGYSKWGLIDEAFTIFQLMP----QKNSASWNAMMAAYVQTNR 234
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF LF++M++ V T++LSAC L AL GK H ++ R + D + T
Sbjct: 235 FHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTT 294
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG A + F + + WN MI G +G E+A+++F M++++V
Sbjct: 295 AIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQRV 354
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +F+ +L+AC H+G V++ F+ M +G++P+ EHFGCMVDLLGR+G + EAR
Sbjct: 355 APDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIEPRMEHFGCMVDLLGRAGMVPEAR 414
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI E+P P V+V +LLGAC H N +LGEE+ ++ E+EP N +V+L+N+YA G
Sbjct: 415 KLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEIGRRVIELEPNNSGRYVLLANLYANAG 474
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WED ++R++++DR + K PG S
Sbjct: 475 KWEDAAKVRKLMDDRGVKKAPGFS 498
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 14/173 (8%)
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP---SWARRFFDQFEIKPD 214
C +S L+ + H +IR L+ + LI+ + ++A + FD I
Sbjct: 32 CQSMSQLR---QYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDS--IPQP 86
Query: 215 DPAFWNAMISGYGRNG--EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D +N +I G+ + S + ++ M Q V PN+ +F ++L AC H +Q
Sbjct: 87 DAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQH---GMQ 143
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
I + FG ++ + L+EAR + +P P + SL+
Sbjct: 144 IHAHL-FKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLI 195
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/386 (36%), Positives = 216/386 (55%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +SV+SACA ++ GRQVH S+ I AL+D+Y+KCG
Sbjct: 218 PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG-------- 269
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A LFEGL+++ D +WN++I G++ + +
Sbjct: 270 ------------------------EVETACGLFEGLSYK----DVISWNTLIGGYTHMNL 301
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESMA 186
EA LF++M +G P+ + S+L ACA L A+++G+ H ++ + + S
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A++ FD I + WNAMI G+ +G +A +IF M++ +
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDS--ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE 419
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +FV +LSAC H+G +D IF M +D+ + PK EH+GCM+DLLG SG EA
Sbjct: 420 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEA 479
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+I + EP ++ SLL AC H N +LGE A L ++EP+NP +V+LSNIYA
Sbjct: 480 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATA 539
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V +IR ++ND+ + K+PG S+
Sbjct: 540 GRWNEVAKIRALLNDKGMKKVPGCSS 565
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 196/382 (51%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF ++ +CA + G+Q+HG LK+ D + T+L+ MY++ G L A V
Sbjct: 86 PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKV 145
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++ +I G G A ++F+ + + D +WN+MISG+++ G
Sbjct: 146 FDQ-SSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK----DVVSWNAMISGYAETGN 200
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + SV+SACA ++++LG++ H + + + A
Sbjct: 201 NKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 260
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y+KCG+ A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 261 LIDLYIKCGEVETACGLFEGLSYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G ++ I ++ G+ H ++D+ + G ++ A+
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 378
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H ++ ++ M+ E+EP++ T +LS ++G
Sbjct: 379 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 438
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 439 M---LDLGRHIFRSMKEDYKIT 457
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 157/358 (43%), Gaps = 83/358 (23%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N+L WNTM G L+ DP +
Sbjct: 38 LPYAISVFETIQ-EPNLLIWNTMFRGHALSS-------------------DPVS------ 71
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A L+ M S G++P+ +L +CA A + G++ HGHV++ +
Sbjct: 72 ----------ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY++ G+ AR+ FDQ EI
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMISGY G + A+E+F M + V+P+ ++ V+V+SAC + ++ Q
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD G + ++DL + G ++ A L L V +++L+G + H+
Sbjct: 242 VHSWIDDH-GFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG-YTHM 299
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNIYA-------GLGRWEDVGRIRQMINDR 381
N L +E + QEM E+P +LS + A +GRW I IN R
Sbjct: 300 N--LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW-----IHVYINKR 350
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 113/249 (45%), Gaps = 14/249 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L ++ GR +H K K + + T+L+DMY KCG +
Sbjct: 317 ESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEA 376
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +R++ +WN MI G ++GR+ A ++F + +PD T+ ++S S
Sbjct: 377 AQQVFDSIL-NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 435
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M + + P L+ C+ +L L KE + ++
Sbjct: 436 HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG------LFKEAEEMINTMEME 489
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G + +I+P +P + + + Y G + +I
Sbjct: 490 PDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIR 549
Query: 240 DLMQQEKVK 248
L+ + +K
Sbjct: 550 ALLNDKGMK 558
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 216/379 (56%), Gaps = 8/379 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +++SAC+SL Q G+Q+H K+ D ++ +A +D Y KCG L A +F EL
Sbjct: 306 TLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSEL 365
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
K IL N+MI +G+ E A ++F + + +WNSMI G SQ G EA
Sbjct: 366 KTYDTILL-NSMITVYSNSGKIEDAKQIFNTMPSKSL----ISWNSMIVGLSQNGCPVEA 420
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF M + + +TSV+SACA +S+L+LG++ L+ DE ++T+L+
Sbjct: 421 LDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDF 480
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG R+ FD +K D+ + WN+M+ GY NG A+ +F+ M+ V+P
Sbjct: 481 YCKCGFIEIGRKLFDTM-MKSDEIS-WNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEI 538
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F VLSAC H G V + + F +M D+ + P EH+ CMVDL R+G L+EA LI+
Sbjct: 539 TFTGVLSACDHCGLVKEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKR 598
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P E S++ S+L C H DLGE++A ++ E++PEN +V LS+I+A G WE
Sbjct: 599 MPFEADASMWSSVLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESS 658
Query: 372 GRIRQMINDRQLTKLPGIS 390
+R+++ +RQ+ K PG S
Sbjct: 659 ALVRKVMQERQVQKYPGYS 677
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 13 TFI--SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
TF+ +VI AC L +Q G+Q+H L + D+++ ++L+++Y KCG L AH V
Sbjct: 172 TFVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLN 231
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ + + + +I G +GR A F + WNS+ISG+
Sbjct: 232 TMEEPDD-FSLSALITGYANHGRMNDARRAF----YRKSNSCVVVWNSLISGYVTNNEEI 286
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
EAF LF MQ G+ + ++LSAC+ L + GK+ H + + L D +A+A I
Sbjct: 287 EAFLLFNDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFI 346
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
Y KCG + A + F E+K D N+MI+ Y +G+ E A +IF+ M + +
Sbjct: 347 DAYSKCGSLNDACKLFS--ELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSL--- 401
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMD 278
S+ +++ G +AL +F MM+
Sbjct: 402 -ISWNSMIVGLSQNGCPVEALDLFCMMN 428
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 156/358 (43%), Gaps = 66/358 (18%)
Query: 30 GRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
G+Q+H L K QS + L+ MY +CG + AH +F E+ RN +WNTMI G
Sbjct: 24 GKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMP-HRNCFSWNTMIEGY 82
Query: 89 MLNGRSEKAMELFE---------------GLAHEG--------FKPDP----ATWNSMIS 121
M +G E+++ LF+ G A G F P WNSMI
Sbjct: 83 MKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNSMIH 142
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT----SVLSACADLSALKLGKETHGHVIRA 177
+++ G EA +LF+++ + S C T +V+ AC DL ++ GK+ H ++
Sbjct: 143 SYARNGSPREAVRLFKELNLDPLDKSC-CDTFVLATVIGACTDLGEIQCGKQIHARILID 201
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF------------------- 218
++ D + ++LI++Y KCG A + E +PDD +
Sbjct: 202 NMELDSVLTSSLINLYGKCGDLDSAHCVLNTME-EPDDFSLSALITGYANHGRMNDARRA 260
Query: 219 -----------WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
WN++ISGY N E A +F+ MQ++ +K + ++ +LSAC +
Sbjct: 261 FYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCNS 320
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
Q+ GL +D + G L++A +L EL + +S++
Sbjct: 321 QHGKQMHAYA-CKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTILLNSMI 377
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N SVISACAS+ L+ G Q+ + SD +I T+LVD Y KCG + +F
Sbjct: 435 NRFNLTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLF 494
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ S I +WN+M+ G NG +A+ LF + H G +P T+ ++S G+
Sbjct: 495 DTMMKSDEI-SWNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLV 553
Query: 130 FEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E ++ F MQ + P ++ + ++ A L +E + R D SM ++
Sbjct: 554 KEGWRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCL---EEAMNLIKRMPFEADASMWSS 610
Query: 189 LISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ M G+ + Q E+ P++ + + S + +G++ES+ + +MQ+ +V
Sbjct: 611 VLRGCMAHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQV 670
Query: 248 K 248
+
Sbjct: 671 Q 671
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 211/380 (55%), Gaps = 39/380 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V+ ++ + AC L +L GR+VH L ++I +S+ + AL+ MY KC A VF E
Sbjct: 429 VSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDE 488
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L G+K +WN+MI G +Q G +
Sbjct: 489 L-----------------------------------GYKTR-VSWNAMILGCTQNGSSED 512
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF +MQ + P + S++ A AD+S + HG+ IR L++D + TALI
Sbjct: 513 AVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALID 572
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ S AR F+ + WNAMI GYG +G + AVE+F+ M+ PN
Sbjct: 573 MYAKCGRVSIARSLFNS--ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNE 630
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F++VLSAC HAG VD+ + F+ M +D+GL+P EH+G MVDLLGR+G+L EA I+
Sbjct: 631 TTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQ 690
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++P EP +SVY ++LGAC H N +L EE A ++ E+EPE V+L+NIYA W+D
Sbjct: 691 KMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKD 750
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V R+R + + L K PG S
Sbjct: 751 VARVRTAMEKKGLQKTPGWS 770
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 46/370 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E + P++VT +SV+ ACA L R+VH ++ + TA++D+Y KCG
Sbjct: 317 MQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCG 376
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF ++ ++ +WN+MI
Sbjct: 377 AVDSARKVFDGMQDRNSV------------------------------------SWNAMI 400
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+++ G EA LF++M G+ + V + L AC +L L G+ H ++R L
Sbjct: 401 KGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLE 460
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ ++ ALI+MY KC + A + FD+ K WNAMI G +NG E AV +F
Sbjct: 461 SNVNVMNALITMYCKCKRTDLAAQVFDELGYKTR--VSWNAMILGCTQNGSSEDAVRLFS 518
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLG 298
MQ E VKP+S + V+++ A + LQ + L Q+ + ++D+
Sbjct: 519 RMQLENVKPDSFTLVSIIPAL---ADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 575
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFV 356
+ GR+ AR L + V +++++ H + + E+ MK P T
Sbjct: 576 KCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLS 635
Query: 357 ILSNI-YAGL 365
+LS +AGL
Sbjct: 636 VLSACSHAGL 645
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 155/356 (43%), Gaps = 41/356 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF S++ CA+ L GR VH + + TAL +MY KC A V
Sbjct: 223 PVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRV 282
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + D WN++++G+++ G+
Sbjct: 283 FDRMPAR------------------------------------DRVAWNALVAGYARNGL 306
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + +MQ G P + SVL ACAD AL +E H +R ++ +++T
Sbjct: 307 AEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVST 366
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ +Y KCG AR+ FD + + + WNAMI GY NG+ A+ +F M E V
Sbjct: 367 AILDVYCKCGAVDSARKVFDGMQDR--NSVSWNAMIKGYAENGDATEALALFKRMVGEGV 424
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S +A L ACG G +D+ ++ ++ GL+ ++ + + R D A
Sbjct: 425 DVTDVSVLAALHACGELGFLDEGRRVHELL-VRIGLESNVNVMNALITMYCKCKRTDLAA 483
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
++ EL T +++++ C + +S+ + ++Q +E P F ++S I A
Sbjct: 484 QVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQ-LENVKPDSFTLVSIIPA 538
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 5/180 (2%)
Query: 132 AFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A F M ++G P L+ TS+L CA + L G+ H + L+ + ATAL
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKP 249
+MY KC +P ARR FD+ + D WNA+++GY RNG E+AV + MQ+E +P
Sbjct: 268 NMYAKCRRPGDARRVFDRMPAR--DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERP 325
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ + V+VL AC A + ++ G + ++D+ + G +D AR++
Sbjct: 326 DAVTLVSVLPACADAQALGACREVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKV 384
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T +S+I A A + R +HG ++++ D + TAL+DMY KCG + A +
Sbjct: 526 KPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARS 585
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI G +G + A+ELFE + G P+ T+ S++S S G
Sbjct: 586 LFNSAR-DRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG 644
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E + F M + G+ P ++
Sbjct: 645 LVDEGQEYFSSMKEDYGLEPGME 667
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 225/424 (53%), Gaps = 49/424 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T ISV+ CA+ L G+ VH L +K + L+DMY KCG L A VF+++
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA------------------ 114
G RN+++W +MIAG +GRS+ A+ L + + EG K D
Sbjct: 313 -GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNG 371
Query: 115 -----------------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMV----------PS 147
N+++ +++ G A +F M ++ P
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPD 431
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ + +L ACA LSAL+ GKE HG+++R + D +A AL+ +Y+KCG AR FD
Sbjct: 432 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
I D W MISGYG +G A+ F+ M+ ++P+ SF+++L AC H+G +
Sbjct: 492 M--IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLG 326
++ + F +M +DF ++PK EH+ CMVDLL R+G L +A E I LP P +++ +LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLC 609
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
C + + +L E++A ++ E+EPEN +V+L+NIYA +WE+V R+R+ I + L K
Sbjct: 610 GCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKN 669
Query: 387 PGIS 390
PG S
Sbjct: 670 PGCS 673
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 162/341 (47%), Gaps = 24/341 (7%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C E + T+ SV+ CA L G++VH + D ++G LV +Y CG L
Sbjct: 92 CQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLK 151
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH---EGFKPDPAT----- 115
VF ++ +N+ WN M++ G ++++ LF+ + EG +P+ A+
Sbjct: 152 EGRRVFDTME-KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDK 210
Query: 116 --------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
WNSMISG+ G+ +++++M G+ L + SVL CA+ L LG
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG 270
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
K H I++ + + + L+ MY KCG A R F++ + + W +MI+GY
Sbjct: 271 KAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEK--MGERNVVSWTSMIAGYT 328
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
R+G + A+ + M++E VK + + ++L AC +G +D + + + +
Sbjct: 329 RDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKAN---NMES 385
Query: 288 EHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
F C ++D+ + G +D A + + + +++++G
Sbjct: 386 NLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIG 426
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 218/383 (56%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ V ++V+SAC L GR VH + D +G AL+D+Y KCG L A
Sbjct: 366 PDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRT 425
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F++L ++ +WN+M+ G +G +KA + F + + D +WN+M++ + + +
Sbjct: 426 FEQLP-CKSAASWNSMLDGFCRSGGVDKARDFFNKIP----EKDIVSWNTMVNAYVKHDL 480
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+F++F KMQS+ + P + S+LS+CA + AL G + ++ + ++ D + TA
Sbjct: 481 FNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTA 540
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F Q I + W AM++ Y G+ A++++ M++ VK
Sbjct: 541 LIDMYGKCGCVEMAYEIFTQ--IIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVK 598
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+A+L+AC H G VD+ + F + + + P H+GCMVDLLGR G L+E +
Sbjct: 599 PDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVK 658
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P EP VS++ SL+ AC H N +L E+ +L E++P N V+LSNIYA GR
Sbjct: 659 FIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGR 718
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV ++R +++ + K PG +
Sbjct: 719 WDDVSKVRTKLHETGVPKQPGFT 741
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 23/325 (7%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF +I AC ++ G +VHG LK + + L+ +Y KCG L +F+++
Sbjct: 135 TFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKM 194
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-----G 127
R++++WNTMI+ +L G +A++LF+ + G PD T S++S ++L G
Sbjct: 195 T-HRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMG 253
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMA 186
R + + K+ G + L C+ + S C + E HG + R D ++ D +
Sbjct: 254 KRLHLYIVDNKLWIRGSL--LNCLVDMYSKCGKMD------EAHGLLSRCDESEVDVVLW 305
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+S Y+K + AR+ FD+ + W M+SGY + G Y ++E+F M+ E
Sbjct: 306 TTLVSGYVKSNKIDKARQLFDK--MNERSLVSWTTMMSGYVQGGYYCESLELFQQMRFEN 363
Query: 247 VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V P+ + V VLSAC H D +++ F + +G+ ++DL + G+LD
Sbjct: 364 VIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT---YGMLVDGFLGNALLDLYAKCGKLD 420
Query: 305 EARELIRELPEPTVSVYHSLL-GAC 328
EA +LP + + ++S+L G C
Sbjct: 421 EALRTFEQLPCKSAASWNSMLDGFC 445
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 125/255 (49%), Gaps = 13/255 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T IS++S+CA + L G V+ K E D M+GTAL+DMY KCGC+ A+
Sbjct: 497 KPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYE 556
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ +N+ W M+A + G++ +A++L+ + G KPD T+ ++++ S G
Sbjct: 557 IFTQII-EKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGG 615
Query: 128 MRFEAFKLFEKMQS-TGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F K++S ++P++ C+ +L L +ET + R + D
Sbjct: 616 LVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHL------EETVKFIERMPIEPDV 669
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S+ ++L+ A + F Q EI P + + + Y G ++ ++ +
Sbjct: 670 SIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKL 729
Query: 243 QQEKVKPNSASFVAV 257
+ V P F +
Sbjct: 730 HETGV-PKQPGFTMI 743
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P+ WN+++ + G E + + M + G++ + ++ AC +KLG E
Sbjct: 95 EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG +++ +++S+ L+ +Y KCG+ + F++ + D WN MIS Y
Sbjct: 155 VHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHR--DVISWNTMISCYVLK 212
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQ 287
G Y A+++FD M V P+ + V+++S C ++ K L ++ + D L +
Sbjct: 213 GMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV---DNKLWIRG 269
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
C+VD+ + G++DEA L+ E V V
Sbjct: 270 SLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDV 302
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 210/349 (60%), Gaps = 8/349 (2%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ +++ A++ Y++C + A +F+ + +N+ +WNTMI G NG +A F+
Sbjct: 213 EKNSVSWNAIIAGYVQCKRMDQARELFEAMP-CQNVSSWNTMITGYAQNGDIAQARNFFD 271
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D +W ++I+G++Q G EA LF +M+ G + TS LS CA+++
Sbjct: 272 RMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIA 327
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
AL+LGK+ HG V++A L + AL+ MY KCG A F+ E K + WN M
Sbjct: 328 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK--EVVSWNTM 385
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I+GY R+G + A+ +F+ M++ + P+ + V VLSAC H G VDK + F M D+G
Sbjct: 386 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 445
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ +H+ CM+DLLGR+GRLD+A+ L++ +P EP + + +LLGA H N++LGE+ A
Sbjct: 446 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 505
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ EMEP+N +V+LSN+YA GRW DVGR+R + DR + K+PG S
Sbjct: 506 KMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF S +S CA + L+ G+QVHG +K +S +G AL+ MY KCG + A+ VF
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 371
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ + +++WNTMIAG +G ++A+ LFE + G PD T ++S S G+
Sbjct: 372 EGIE-EKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVL 155
+ + F M Q G+ + K T ++
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMI 457
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 42/265 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + A++ Y + G + A +F E+ +N ++WN M+A + NGR E A LFE
Sbjct: 58 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP-CKNSISWNGMLAAYVQNGRIEDARRLFE 116
Query: 103 ---------------------------GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
G+ + D +WN+MISG++Q G EA +L
Sbjct: 117 SKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL 176
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
FE+ V + T+++S L + V K+ A+I+ Y++
Sbjct: 177 FEESP----VRDVFTWTAMVSGYVQNGMLDEARR----VFDGMPEKNSVSWNAIIAGYVQ 228
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
C + AR F+ + + + WN MI+GY +NG+ A FD M Q +S S+
Sbjct: 229 CKRMDQARELFEAMPCQ--NVSSWNTMITGYAQNGDIAQARNFFDRMPQR----DSISWA 282
Query: 256 AVLSACGHAGHVDKALQIFTMMDDD 280
A+++ +G+ ++AL +F M D
Sbjct: 283 AIIAGYAQSGYGEEALHLFVEMKRD 307
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 11/124 (8%)
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
AR FDQ + D WNAM+SGY +NG + A EIFD M + NS S+ +L+A
Sbjct: 49 ARLLFDQ--MPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAY 102
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
G ++ A ++F D + + CM+ + RL +AR + +PE +
Sbjct: 103 VQNGRIEDARRLFESKAD-----WELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 157
Query: 322 HSLL 325
++++
Sbjct: 158 NTMI 161
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 56/219 (25%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WN+M+SG++Q G EA ++F++M C S+
Sbjct: 60 DVVSWNAMLSGYAQNGYVKEAKEIFDEM---------PCKNSI----------------- 93
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNG 230
+++ Y++ G+ ARR F E K D + WN M+ GY +
Sbjct: 94 -------------SWNGMLAAYVQNGRIEDARRLF---ESKADWELISWNCMMGGYVKRN 137
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
A IFD M + + S+ ++S G + +A ++F P ++ F
Sbjct: 138 RLVDARGIFDRMPER----DEVSWNTMISGYAQNGELLEAQRLFEE-------SPVRDVF 186
Query: 291 G--CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
MV ++G LDEAR + +PE +++++
Sbjct: 187 TWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAG 225
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 221/384 (57%), Gaps = 5/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S T SV++ACA + L+ G+++H + QSDT +G ALV+MY KC L A
Sbjct: 431 EPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQV 490
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ +++ TWN +I+G + + E+ L E + +G+ P+ TWNS+++G +
Sbjct: 491 AFDEVM-EKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENR 549
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+LF +MQ + + P + V +L AC+ L+ L+ GK+ H H I+ + D +
Sbjct: 550 QLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGA 609
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG +A+ +D+ I + NAM++ +G E + +F M
Sbjct: 610 ALVDMYAKCGSLKYAQLAYDR--ISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGF 667
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +F++VLS+C H G V+ + F +M + +KP +H+ MVDLL RSG+L EA
Sbjct: 668 IPDHVTFLSVLSSCVHVGSVETGCEFFDLM-GYYNVKPTLKHYTSMVDLLSRSGQLHEAY 726
Query: 308 ELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+++P SV + +LLG C H N +LGE A +L E+EP N +V+L+N++A
Sbjct: 727 ELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYAR 786
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D+ R+R M+ DR + K PG S
Sbjct: 787 RWTDLARVRGMMKDRGMHKSPGCS 810
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 200/415 (48%), Gaps = 41/415 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + F V AC+ L ++ GRQ+HGL +K + + AL+DMY KCG L A
Sbjct: 157 ELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKK 216
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK-PDPATWNSMISGFSQL 126
V ++ R+ +TWN++I NG +A+E E + + P+ +W+++I GF+Q
Sbjct: 217 VLVKMP-ERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQN 275
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA ++ +MQ G+VP+ + + VL ACA L L LGK+ HG++ R D + +
Sbjct: 276 GYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVV 335
Query: 187 TALISMYMKCGQPSWARRFFDQFEIK-------------------PDDPAF--------- 218
AL+ +Y +CG A + F +F +K F
Sbjct: 336 NALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIE 395
Query: 219 -----WNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
WN++ISGY RN ++ A +F +++ +E ++P+S + +VL+AC + + +
Sbjct: 396 RGLISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKE 455
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
I GL+ G +V++ + L A+ E+ E V +++L+ +
Sbjct: 456 IHAQAIVK-GLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISG---YT 511
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSN-IYAGLGRWEDVGRIRQMINDRQLTKL 386
S+ E + L++M+ + P + N I AGL + Q+ ++ Q++KL
Sbjct: 512 RSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKL 566
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 187/393 (47%), Gaps = 48/393 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T V+ ACA L L G+Q+HG + + S+ ++ ALVD+Y +CG + A +
Sbjct: 295 PNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKI 354
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +N+L+ NTMI G +G KA ELF+ + G + +WNS+ISG+ + M
Sbjct: 355 FLKFS-VKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFM 413
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF +F+ M G+ P + SVL+ACAD +L+ GKE H I L D +
Sbjct: 414 FDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGG 473
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KC + A+ FD E+ D WNA+ISGY R+ + E + + M+ +
Sbjct: 474 ALVEMYSKCQDLTAAQVAFD--EVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGY 531
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP---------------------K 286
PN ++ ++L+ +D +Q+F+ M L+P K
Sbjct: 532 HPNIYTWNSILAGLVENRQLDLTMQLFSEMQIS-KLRPDIYTVGIILPACSRLATLERGK 590
Query: 287 QEHF--------------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
Q H +VD+ + G L A+ + P + ++++L AC H
Sbjct: 591 QAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHG 650
Query: 333 NSDLGEEMAMKLQEME-----PENPTPFVILSN 360
+ GEE Q M P++ T +LS+
Sbjct: 651 H---GEEGISLFQTMLALGFIPDHVTFLSVLSS 680
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 141/307 (45%), Gaps = 44/307 (14%)
Query: 5 LSDEP-NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
L ++P N+ + SV+ +C + G+QVH T+K +D I T L+ MY +CG L
Sbjct: 55 LDNKPLNTSKYASVLDSCKCP---KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLK 111
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F+ + RN+ +W +++ + +G LFE
Sbjct: 112 DADFLFETMP-MRNLHSWKAILSVYLDHG-------LFE--------------------- 142
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
EAF LF+ +Q G+ V AC+ L +++LG++ HG VI+ +
Sbjct: 143 -------EAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNI 195
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++ ALI MY KCG A++ ++ D WN++I+ NG A+E + M+
Sbjct: 196 YVSNALIDMYGKCGSLDDAKKVL--VKMPERDSVTWNSVITACAANGMVYEALEFLEKMK 253
Query: 244 Q-EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ PN S+ AV+ G+ ++A+++ M + GL P + ++ R R
Sbjct: 254 SLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVE-GLVPNAQTLAGVLPACARLQR 312
Query: 303 LDEAREL 309
LD ++L
Sbjct: 313 LDLGKQL 319
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 6/177 (3%)
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVL +C KLGK+ H H I+ + D + T L+ MY +CG A F+ +
Sbjct: 66 ASVLDSC---KCPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPM 122
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ + W A++S Y +G +E A +F ++Q + V+ + F V AC G V+
Sbjct: 123 R--NLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGR 180
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
Q+ ++ F ++D+ G+ G LD+A++++ ++PE ++S++ AC
Sbjct: 181 QLHGLV-IKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITAC 236
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 224/386 (58%), Gaps = 8/386 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+ +P +T+ SV A A L G Q+HG +K+ ++D I +++MY+ CG L A
Sbjct: 92 TTQPQRLTYPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEA 151
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F G +++TWNTMI G+ G +K+ LF+ + + +WNSMISG+ +
Sbjct: 152 QRIFDGATGF-DVVTWNTMIIGLAKCGEIDKSRRLFDKM----LLRNTVSWNSMISGYVR 206
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G FEA +LF +MQ G+ PS + S+L+ACA L AL+ G+ H ++++ + + +
Sbjct: 207 KGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIV 266
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TA+I MY KCG A + F K + WN++I G +G AV +F ++
Sbjct: 267 ITAIIDMYSKCGSIDKALQVFKSAPKK--GLSCWNSLILGLAMSGRGNEAVRLFSKLESS 324
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+KP+ SF+ VL+AC HAG VD+A F +M + + ++P +H+ CMVD+LGR+G L+E
Sbjct: 325 NLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEE 384
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELI+ +P P ++ SLL +C + N ++ ++ A ++ E++P + F++LSN+YA
Sbjct: 385 AEELIKSMPVNPDAIIWGSLLSSCREYGNIEMAKQAAKRVNELDPNESSSFILLSNVYAA 444
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+E+ R + ++Q+ K PG S
Sbjct: 445 HNHFEEAIEQRLSLKEKQMDKEPGCS 470
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV--PSLKCVTSVLSACADLSALKLGK 168
P+ WN++I GFSQ A LF M T P SV A A L G
Sbjct: 58 PNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVFKAYAQLGLAHEGA 117
Query: 169 ETHGHVIRADLNKDESMATALISMYM-------------------------------KCG 197
+ HG VI+ L D+ + +++MY+ KCG
Sbjct: 118 QLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCG 177
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
+ +RR FD+ ++ + WN+MISGY R G + A+E+F MQ+E +KP+ + V++
Sbjct: 178 EIDKSRRLFDKMLLR--NTVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSL 235
Query: 258 LSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
L+AC G + + I ++ ++F L ++D+ + G +D+A ++ + P+
Sbjct: 236 LNACACLGALRQGEWIHDYIVKNNFALNSIV--ITAIIDMYSKCGSIDKALQVFKSAPKK 293
Query: 317 TVSVYHSL-LGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+S ++SL LG S G E ++E N P
Sbjct: 294 GLSCWNSLILGLAM----SGRGNEAVRLFSKLESSNLKP 328
>gi|224057531|ref|XP_002299253.1| predicted protein [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 229/419 (54%), Gaps = 41/419 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF V+ A LL L G++VH + ++ +SD + ALVDMY KCGC+ A VF
Sbjct: 125 NKYTFSIVLKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANALVDMYSKCGCIGYARTVF 184
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFE--------------------------- 102
+ R+I++W +MI+G G+ E+A+ LFE
Sbjct: 185 DRM-AKRDIVSWTSMISGYCNVGKIEEALVLFERMKLEGLEPNDFTWNALISGYARRGDS 243
Query: 103 --------GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+ EG PD TWN+MI+GF Q +AFKLF+ M G+ P+L V +
Sbjct: 244 DGAFSLLSKMTREGLVPDLVTWNAMIAGFVQGERAGDAFKLFQDMLVLGVKPNLVTVAGL 303
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDES-MATALISMYMKCGQPSWARRFFDQFEIKP 213
L AC +S+++ G+ HG V R + + + +A+ALI MY +CG AR F++ I
Sbjct: 304 LPACGMVSSIQRGRAIHGLVYRLEFDISNAFIASALIDMYSECGSFKEARTVFEK--IHN 361
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ A WNAMI YG++G +++++F+ M E ++ N + + VLSAC H+G+V+K L+I
Sbjct: 362 KNVASWNAMIGCYGKHGMVNTSIQLFERMHGEGIQANDVTLLCVLSACSHSGYVEKGLEI 421
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHL 332
F M + + + K+EH+ C+VD+L RSGRL +A EL++E+P E T S+ + C H
Sbjct: 422 FWSMKERYMVDRKKEHYACVVDMLSRSGRLVDAYELVKEMPIEVTKSIAGAFFNGCMIHG 481
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV-GRIRQMINDRQLTKLPGIS 390
DL E+M + + + P F +LS IYA G ++V +++++ +R+ K P S
Sbjct: 482 RRDLAEKMIDDVTRGDLKKPGSFAMLSAIYATSGERKEVRNTMKKIVKERKAQKEPACS 540
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 159/377 (42%), Gaps = 50/377 (13%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMI---GTALVDMYLKCGCLPCAHNVFQELK 73
++ C L+ G+QVH + + +D I + LV MY CG + A VF+ ++
Sbjct: 30 LLKQCLKFKTLRGGKQVHAWL--VTRGTDLRILSLNSKLVGMYASCGDVKSATLVFKRIR 87
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
N+ N M+ A EG+ EA
Sbjct: 88 NP-NVFALNWMVLAS----------------AFEGYYK-------------------EAI 111
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
F M+ + + + + VL A L L GKE H V + D +A AL+ MY
Sbjct: 112 GYFCSMKDSVFIYNKYTFSIVLKAFVGLLDLNKGKEVHSMVKQLGFESDVCVANALVDMY 171
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG +AR FD+ + D W +MISGY G+ E A+ +F+ M+ E ++PN +
Sbjct: 172 SKCGCIGYARTVFDR--MAKRDIVSWTSMISGYCNVGKIEEALVLFERMKLEGLEPNDFT 229
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+ A++S G D A + + M + GL P + M+ + R +A +L +++
Sbjct: 230 WNALISGYARRGDSDGAFSLLSKMTRE-GLVPDLVTWNAMIAGFVQGERAGDAFKLFQDM 288
Query: 314 ----PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV--ILSNIYAGLGR 367
+P + LL AC + G + + +E + F+ L ++Y+ G
Sbjct: 289 LVLGVKPNLVTVAGLLPACGMVSSIQRGRAIHGLVYRLEFDISNAFIASALIDMYSECGS 348
Query: 368 WEDVGRIRQMINDRQLT 384
+++ + + I+++ +
Sbjct: 349 FKEARTVFEKIHNKNVA 365
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 20/258 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLP 63
L +PN VT ++ AC + +Q GR +HGL ++E S+ I +AL+DMY +CG
Sbjct: 291 LGVKPNLVTVAGLLPACGMVSSIQRGRAIHGLVYRLEFDISNAFIASALIDMYSECGSFK 350
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF+++ ++N+ +WN MI +G +++LFE + EG + + T ++S
Sbjct: 351 EARTVFEKIH-NKNVASWNAMIGCYGKHGMVNTSIQLFERMHGEGIQANDVTLLCVLSAC 409
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLK----CVTSVLSACADL-SALKLGKETHGHVIRAD 178
S G + ++F M+ MV K CV +LS L A +L KE V +
Sbjct: 410 SHSGYVEKGLEIFWSMKERYMVDRKKEHYACVVDMLSRSGRLVDAYELVKEMPIEVTK-- 467
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFE----IKPDDPAFWNAMISGYGRNGEYES 234
S+A A + M G+ A + D KP A +A+ + G E +
Sbjct: 468 -----SIAGAFFNGCMIHGRRDLAEKMIDDVTRGDLKKPGSFAMLSAIYATSGERKEVRN 522
Query: 235 AVEIFDLMQQEKVKPNSA 252
++ ++++ K + A
Sbjct: 523 TMK--KIVKERKAQKEPA 538
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 218/384 (56%), Gaps = 6/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF V+ ACA L ++ G+Q+HG +K+ SD + + LV +Y+ CG + AH
Sbjct: 120 EPNKFTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHV 179
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + N++ WN MI G + G + ELF+ + ++ +WN MISG +Q G
Sbjct: 180 LFYQTRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSV----VSWNVMISGCAQNG 235
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F MQ + P+ + SVL A + L A++LGK H + ++ D+ + +
Sbjct: 236 HFKEAIEMFHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGS 295
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A + F+ K +P W+A+I G +G A++ F MQQ V
Sbjct: 296 ALIDMYSKCGSIDKAVQVFEGIRNK-KNPITWSAIIGGLAMHGRARDALDHFWRMQQAGV 354
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ ++ VLSAC HAG V++ I+ M + GL P+ EH+GCMVDLLGR+G L+EA
Sbjct: 355 TPSDVVYIGVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAE 414
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P +P + +LLGAC H N ++GE +A L P + +V LSN++A G
Sbjct: 415 QLILNMPVKPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEG 474
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WE V ++R + + + K PG S
Sbjct: 475 NWEGVVKVRLKMKELDIRKDPGCS 498
>gi|357143748|ref|XP_003573036.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Brachypodium distachyon]
Length = 484
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 215/387 (55%), Gaps = 13/387 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L +H L +K+ + ++ T L YL
Sbjct: 66 PNDVTLLTVLSACAGDSSSALARPLALSLHALAVKLFP-CNLLLCTCLARFYLASRLPHL 124
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+++T+NTMI G+M NG A E+F+ E PD +W ++I G
Sbjct: 125 AIKLFDSMP-DRSVVTYNTMITGLMRNGLVAAAREVFD----EMPAPDKVSWTALIDGCV 179
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M G+ P + + +SACA++ AL LG H V+ L +
Sbjct: 180 KNGRHDEAIDCFHSMLRDGVEPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVR 239
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ +AR+ F + I+ WN+MI G+ NG+Y AVE F+ M++
Sbjct: 240 VANSLIDMYARCGQVDFARQVFGR--IRKRTVVSWNSMIVGFAANGQYADAVEHFEAMRR 297
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F VL+AC HAG D+ L+ + M + G+ + EH+GC+VDLLGR+GRL
Sbjct: 298 EGFKPDTVTFTGVLTACSHAGLTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLGRAGRLG 357
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H + DL E++ L E +P + +V+LSNIYA
Sbjct: 358 EAMRVVESMPMRPNEVVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYA 417
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G+W G++R ++ R + K PG S
Sbjct: 418 AVGKWGGAGKVRSLMKSRGVKKRPGQS 444
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT ++ ISACA + L G VH + + + + +L+DMY +CG + A
Sbjct: 200 EPDYVTLVAAISACAEVGALGLGMWVHRFVVDKRLEHNVRVANSLIDMYARCGQVDFARQ 259
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R +++WN+MI G NG+ A+E FE + EGFKPD T+ +++ S G
Sbjct: 260 VFGRIR-KRTVVSWNSMIVGFAANGQYADAVEHFEAMRREGFKPDTVTFTGVLTACSHAG 318
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + ++ M++ G+ ++ CV +L A +LG E V + +E
Sbjct: 319 LTDEGLRYYDAMRTEHGIAARMEHYGCVVDLLG-----RAGRLG-EAMRVVESMPMRPNE 372
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ G A + E P + + + + Y G++ A ++ LM
Sbjct: 373 VVLGALLAGCRMHGDVDLAEQLMQHLLEQDPGGDSNYVLLSNIYAAVGKWGGAGKVRSLM 432
Query: 243 QQEKVK 248
+ VK
Sbjct: 433 KSRGVK 438
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 222/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFIS++SAC + +HG K+ +S M+GTA++ MY K G +
Sbjct: 65 EPNHITFISLLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRK 124
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M NG+ + A+++F+ + D +W +MI+GF
Sbjct: 125 ARLVFDYME-DKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPER----DLISWTAMITGFV 179
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 180 KKGFHEEALAWFREMQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVR 239
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ FD E + WN++I G+ NG ++ F MQ+
Sbjct: 240 VSNSLIDLYCRCGCVEFARQVFDTMEKRT--VVSWNSVIVGFAANGNANESLVYFRKMQE 297
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F L+AC H G V++ Q F MM D+ + P+ EHFGC+VDL R+GRL+
Sbjct: 298 EGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEHFGCLVDLYSRAGRLE 357
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A +++ +P +P V SLL AC H N + E MK + +++ + + +VILSN+Y
Sbjct: 358 DAIKVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKHISDLDVKGHSNYVILSNMY 417
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 418 AADGKWEGASKMRRKMKGLGLKKQPGYSS 446
>gi|297741566|emb|CBI32698.3| unnamed protein product [Vitis vinifera]
Length = 493
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 228/414 (55%), Gaps = 36/414 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF S+I AC+SL + GRQ+H LK E + + AL+ MY K + A +V
Sbjct: 39 PDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDV 98
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +R++++W +MIAG G +A+ F+ + H+G +PD WN++I+GF+ +
Sbjct: 99 FSRM-ATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQG-RPDLVAWNAIIAGFAYGEL 156
Query: 129 R-------------------------------FEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
R E F+L + M + P +T+VL A
Sbjct: 157 RDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGA 216
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
A+ ++++G + H + ++ LN D S+ LI +Y KCG A + FD I PD +
Sbjct: 217 SAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVS 275
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
W+++I GY + G E A+++F M++ VKPN +FV VL+AC H G V++ +++ M
Sbjct: 276 -WSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTM 334
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
+ +FG+ P +EH CMVDLL R+G L+EA I ++ +P + V+ +LL AC H N D+
Sbjct: 335 EKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDV 394
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+ A + +++P N V+L NIYA G WEDV R+R ++ R + K+PG S
Sbjct: 395 GKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQS 448
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 119/248 (47%), Gaps = 7/248 (2%)
Query: 4 CLSDE-PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
C+S P+ +T +V+ A A + ++ G QVH LK DT + L+D+Y KCG L
Sbjct: 199 CISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSL 258
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
AH +F + ++++W+++I G G E+A++LF+ + KP+ T+ +++
Sbjct: 259 KTAHKIFDSMINP-DVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTA 317
Query: 123 FSQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
S +G+ E +KL+ M+ G+ P+ + + ++ A L E G + + +
Sbjct: 318 CSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCL---NEAEGFIHQMAFDP 374
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + L++ G +R + +I P + A + + Y G +E +
Sbjct: 375 DIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRS 434
Query: 241 LMQQEKVK 248
LM+Q V+
Sbjct: 435 LMKQRGVR 442
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+ +W S+I+G+SQ G A + + +M +G++P S++ AC+ L + LG++ H
Sbjct: 5 NVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLH 64
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
HV++++ ALISMY K A F + + D W +MI+G+ + G
Sbjct: 65 AHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATR--DLISWGSMIAGFSQLGY 122
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
A+ F M + +P+ ++ A+++ + G + A+ F E
Sbjct: 123 ELEALCYFKEMLHQG-RPDLVAWNAIIAGFAY-GELRDAIFFF-------------EEMR 167
Query: 292 CMVDLLGRSG------RLDEARELIRELPEPTVS 319
C DL+ + R D+A E+ R L +S
Sbjct: 168 CNADLVSWNAILTACMRHDQAEEVFRLLKLMCIS 201
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 224/393 (56%), Gaps = 11/393 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCL 62
L +P+ T + ++ C L Q G+ VH + + K S+ ++ AL+DMY+KC L
Sbjct: 222 LGLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKEL 281
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A ++F + ++ ++WNTMIAG G E A FE + D +WNS+I+G
Sbjct: 282 RIAQSIFNVIV-RKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCR----DLVSWNSIIAG 336
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++Q G +LFE M + + P + +++SA A++ AL G+ HG V+R + D
Sbjct: 337 YAQKGDCLMVQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKID 396
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +A I MY KCG A F E+ D W MI+G+ +G A+++F M
Sbjct: 397 AFLGSAFIDMYWKCGSIKRACMVFR--EVTEKDVTVWTTMITGFAFHGYGSKALQLFYEM 454
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q E V PN +FVAVL+AC H+G V + L+IF M + +G++P EH+GC+VDLLGRSGR
Sbjct: 455 Q-EYVMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGR 513
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
E +++I +P +P+ S++ ++L AC + N ++ E +L ++EPE +V+LSNI
Sbjct: 514 FSEVKDVIEMMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNI 573
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA GRW+ +IR+++ R + K G S+ +
Sbjct: 574 YATSGRWKHSDKIREIMESRGVKKTAGCSSVVV 606
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 153/357 (42%), Gaps = 27/357 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF+ ++ A +L Q+H + + L+ +YL+ + A+ V
Sbjct: 128 PNRSTFLFLLQASK---FLSQVMQIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQV 184
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS-----GF 123
FQ++ + + +++N MI G G + +A++ + G KPD T ++ G
Sbjct: 185 FQQM-AAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLGD 243
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCV--TSVLSACADLSALKLGKETHGHVIRADLNK 181
+QLG A+ ++ G++ S + ++L L++ + ++R K
Sbjct: 244 AQLGKSVHAW-----IERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIVR----K 294
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D +I+ Y K G A FF+ + D WN++I+GY + G+ +F+
Sbjct: 295 DTISWNTMIAGYAKVGNLEIAHNFFEDMPCR--DLVSWNSIIAGYAQKGDCLMVQRLFEN 352
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGR 299
M E + P+ + + ++SA G + I + ++ K + F +D+ +
Sbjct: 353 MVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWV---VRMQMKIDAFLGSAFIDMYWK 409
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
G + A + RE+ E V+V+ +++ H ++ ++QE N FV
Sbjct: 410 CGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEYVMPNQVTFV 466
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 7/160 (4%)
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
H P+ +N+MIS S L + ++F + + S+ + P+ +L A LS +
Sbjct: 90 HHTPHPNLYIYNTMISALS-LSLN-QSFAFYNSLLSSCIYPNRSTFLFLLQASKFLSQVM 147
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
+ H H I + L+ +Y++ + A + F Q PD +F N MI G
Sbjct: 148 ---QIHCHAIITGSFYYGYLQNTLMKIYLENEKMGLAYQVFQQMA-APDAVSF-NIMIFG 202
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
Y + G A++ M +KP+ + + +L CG G
Sbjct: 203 YAKKGHNIEALKFLHEMVGLGLKPDEFTMLGLLICCGRLG 242
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 221/383 (57%), Gaps = 9/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + S+ AC++++ L+ G QVH L +K+ Q ++ AL+ MY KC + A V
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++I++WN+ +A ++ N ++A F+ + D +W ++IS ++
Sbjct: 477 FSRMV-TKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQ 531
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F+ M +P+ +T +L C L A K+G++ H I+ ++ + +A A
Sbjct: 532 SNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANA 591
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY KCG +RR FD E + D WN +I+GY ++G A++++ M+ V
Sbjct: 592 LISMYFKCGCAD-SRRIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL 648
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +L+AC HAG VD+ + F M D+GL P EH+ CMVDLLGR+G + A +
Sbjct: 649 PNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQ 708
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P EP ++ +LLGAC H N+++G+ A KL +EP N +V+LSNIY+ LG
Sbjct: 709 FIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGM 768
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V +R+++ + + K PG S
Sbjct: 769 WGEVAEVRKIMKQQGVIKEPGCS 791
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG--TALVDMYLKCGCLPCA 65
E N T+ ++I+A L G ++ E+ I TAL+ +CG + A
Sbjct: 288 ERNEYTWSTMIAA------LSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDA 341
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F+++ +++WN +I G M NG +A ELF+ + + +W MI+G++Q
Sbjct: 342 RILFEQIP-EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----NTISWAGMIAGYAQ 396
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA L +++ +GM+PSL +TS+ AC+++ AL+ G + H ++ +
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI+MY KC +AR+ F + K D WN+ ++ +N + A FD M
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRMVTK--DIVSWNSFLAALVQNDLLDEARNTFDNM--- 511
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ + S+ ++SA HA ++A+ F M
Sbjct: 512 -LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 13/249 (5%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + PNS ++ C SL + G+Q+H + +K+ S+ ++ AL+ MY KCGC
Sbjct: 544 CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD 603
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+ +F +L R+I TWNT+I G +G +A+++++ + G P+ T+ +++
Sbjct: 604 -SRRIF-DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661
Query: 124 SQLGMRFEAFKLFEKM-QSTGMVP---SLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
S G+ E +K F+ M Q G+ P C+ +L D+ G E + +
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ----GAEQ--FIYDMPI 715
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D + +AL+ +R ++ F I+P + + + + Y G + E+
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 239 FDLMQQEKV 247
+M+Q+ V
Sbjct: 776 RKIMKQQGV 784
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ +T+ A++ Y++ G + A +F + SR++ +WN+M+ G + + A LFE
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ +W MISG+ ++ +A+ +F KM G++P S LSA L
Sbjct: 183 KMPERNL----VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L + + ++ +D + TA++++Y + D
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSR------------------DTSVL---- 276
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
++A++ F+ M ++ N ++ +++A H G +D A+ ++
Sbjct: 277 ----------DTAIKFFESM----IERNEYTWSTMIAALSHGGRIDAAIAVYE------- 315
Query: 283 LKPKQEHFGCMVDL---LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+ + C L L + GR+D+AR L ++PEP V +++L+ ++ + + E
Sbjct: 316 -RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG---YMQNGMVNE 371
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGRWED-VGRIRQMINDRQLTKLPGISA 391
+M N + + YA GR E+ +G ++++ L L +++
Sbjct: 372 AKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTS 424
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + R+I+ WN+MI+ NG + A +L++ ++ + T ++SG+
Sbjct: 53 AREVFDAMP-RRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGAILLSGYG 107
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+LG EA ++F+ M V + + S D++ + + A ++D S
Sbjct: 108 RLGRVLEARRVFDGMLERNTV-AWNAMISCYVQNGDITMAR-------RLFDAMPSRDVS 159
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++++ Y Q AR F++ + + W MISGYGR + A +IF M +
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEK--MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 245 EKVKPNSASFVAVLSACGHAGHVD 268
E + P+ ++F + LSA G++D
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLD 241
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 221/383 (57%), Gaps = 9/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + S+ AC++++ L+ G QVH L +K+ Q ++ AL+ MY KC + A V
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++I++WN+ +A ++ N ++A F+ + D +W ++IS ++
Sbjct: 477 FSRMV-TKDIVSWNSFLAALVQNDLLDEARNTFDNM----LSRDDVSWTTIISAYAHAEQ 531
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F+ M +P+ +T +L C L A K+G++ H I+ ++ + +A A
Sbjct: 532 SNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANA 591
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY KCG +RR FD E + D WN +I+GY ++G A++++ M+ V
Sbjct: 592 LISMYFKCGCAD-SRRIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVL 648
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +L+AC HAG VD+ + F M D+GL P EH+ CMVDLLGR+G + A +
Sbjct: 649 PNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQ 708
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P EP ++ +LLGAC H N+++G+ A KL +EP N +V+LSNIY+ LG
Sbjct: 709 FIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGM 768
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V +R+++ + + K PG S
Sbjct: 769 WGEVAEVRKIMKQQGVIKEPGCS 791
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG--TALVDMYLKCGCLPCA 65
E N T+ ++I+A L G ++ E+ I TAL+ +CG + A
Sbjct: 288 ERNEYTWSTMIAA------LSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDA 341
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F+++ +++WN +I G M NG +A ELF+ + + +W MI+G++Q
Sbjct: 342 RILFEQIP-EPIVVSWNALITGYMQNGMVNEAKELFDKMPFR----NTISWAGMIAGYAQ 396
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA L +++ +GM+PSL +TS+ AC+++ AL+ G + H ++ +
Sbjct: 397 NGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFA 456
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI+MY KC +AR+ F + K D WN+ ++ +N + A FD M
Sbjct: 457 CNALITMYGKCRNMEYARQVFSRMVTK--DIVSWNSFLAALVQNDLLDEARNTFDNM--- 511
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ + S+ ++SA HA ++A+ F M
Sbjct: 512 -LSRDDVSWTTIISAYAHAEQSNEAMGAFKTM 542
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 118/249 (47%), Gaps = 13/249 (5%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + PNS ++ C SL + G+Q+H + +K+ S+ ++ AL+ MY KCGC
Sbjct: 544 CEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD 603
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+ +F +L R+I TWNT+I G +G +A+++++ + G P+ T+ +++
Sbjct: 604 -SRRIF-DLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNAC 661
Query: 124 SQLGMRFEAFKLFEKM-QSTGMVP---SLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
S G+ E +K F+ M Q G+ P C+ +L D+ G E + +
Sbjct: 662 SHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQ----GAEQ--FIYDMPI 715
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D + +AL+ +R ++ F I+P + + + + Y G + E+
Sbjct: 716 EPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVAEV 775
Query: 239 FDLMQQEKV 247
+M+Q+ V
Sbjct: 776 RKIMKQQGV 784
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ +T+ A++ Y++ G + A +F + SR++ +WN+M+ G + + A LFE
Sbjct: 124 ERNTVAWNAMISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTGYCHSLQMVDARNLFE 182
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ +W MISG+ ++ +A+ +F KM G++P S LSA L
Sbjct: 183 KMPERNL----VSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLG 238
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L + + ++ +D + TA++++Y + D
Sbjct: 239 NLDVLESLRVLALKTGFERDVVIGTAILNVYSR------------------DTSVL---- 276
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
++A++ F+ M ++ N ++ +++A H G +D A+ ++
Sbjct: 277 ----------DTAIKFFESM----IERNEYTWSTMIAALSHGGRIDAAIAVYE------- 315
Query: 283 LKPKQEHFGCMVDL---LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+ + C L L + GR+D+AR L ++PEP V +++L+ ++ + + E
Sbjct: 316 -RDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITG---YMQNGMVNE 371
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGRWED-VGRIRQMINDRQLTKLPGISA 391
+M N + + YA GR E+ +G ++++ L L +++
Sbjct: 372 AKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTS 424
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + R+I+ WN+MI+ NG + A +L++ ++ + T ++SG+
Sbjct: 53 AREVFDAMP-RRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR----TGAILLSGYG 107
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+LG EA ++F+ M V + + S D++ + + A ++D S
Sbjct: 108 RLGRVLEARRVFDGMLERNTV-AWNAMISCYVQNGDITMAR-------RLFDAMPSRDVS 159
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++++ Y Q AR F++ + + W MISGYGR + A +IF M +
Sbjct: 160 SWNSMLTGYCHSLQMVDARNLFEK--MPERNLVSWTVMISGYGRIENHGKAWDIFCKMHR 217
Query: 245 EKVKPNSASFVAVLSACGHAGHVD 268
E + P+ ++F + LSA G++D
Sbjct: 218 EGLLPDQSNFASALSAVKGLGNLD 241
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 224/386 (58%), Gaps = 8/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDT--MIGTALVDMYLKCGCLPCAH 66
P+ TF+++ S C+ L G+Q+H K + D+ ++ +A+VDMY KCG + A
Sbjct: 210 PDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAE 269
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + S++ W++M+ G G A +LF + HE D +W +MISG+SQ
Sbjct: 270 RVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHM-HE---RDVISWTAMISGYSQA 325
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLNKDESM 185
G EA +LF++M++ G+ P + +VLSACA L A LGK H ++ N++ +
Sbjct: 326 GQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTIL 385
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A++ MY KCG A F + +N+MI+G ++G E+A+ +F +
Sbjct: 386 TAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIST 445
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+KP+ +FV VL ACGH+G +++ ++F M + +G+KP+ EH+GCMVDLLGR G L+E
Sbjct: 446 GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEE 505
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A +L++++P E ++ +LL AC H N +GE KL EME ++ +V+LSNI A
Sbjct: 506 AYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILAD 565
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+WE+ ++R+++ D + K PG S
Sbjct: 566 ANQWEEARQVRKVMEDHGIRKPPGWS 591
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 171/355 (48%), Gaps = 23/355 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF ++++CA L L+ G +VH +K +SD + AL+ +Y G L A +
Sbjct: 109 PNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTL 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-- 126
F E R+++++NTMI G + E A+ LF + + G PD T+ ++ S S L
Sbjct: 169 FDE-SLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNE 227
Query: 127 ---GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
G + A ++++ ++S LK SA D+ A K G + + + +
Sbjct: 228 PNVGKQIHA-QVYKNLRSIDSNILLK------SAIVDMYA-KCGLINIAERVFSTMGTSK 279
Query: 184 SMA--TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
S A ++++ Y +CG+ + AR+ F+ + D W AMISGY + G+ A+E+F
Sbjct: 280 SAAAWSSMVCGYARCGEINVARKLFNH--MHERDVISWTAMISGYSQAGQCSEALELFKE 337
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ +KP+ + VAVLSAC G D +++ ++ ++D+ + G
Sbjct: 338 MEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCG 397
Query: 302 RLDEARELIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+D A E+ R + + T V++S++ H LGE +E+ P
Sbjct: 398 SIDSALEIFRRVGKNMKTGFVFNSMIAGLAQH---GLGETAITVFRELISTGLKP 449
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK-CVTSVLSACADLSALKLGKE 169
P+ WN+MI G+S+ EA L+ M + G+ P +L++CA LS+L+ G E
Sbjct: 73 PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H H+I+ D + ALI +Y G + AR FD+ ++ D +N MI GY
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVR--DLVSYNTMIKGYAEV 190
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
+ ESA+ +F MQ + P+ +FVA+ S C
Sbjct: 191 NQPESALCLFGEMQNSGILPDEFTFVALFSVC 222
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 216/387 (55%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T +SV+SACA ++ GRQVH S+ I AL+D+Y+KCG
Sbjct: 232 RPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG------- 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LFEGL+++ D +WN++I G++ +
Sbjct: 285 -------------------------EVETACGLFEGLSYK----DVISWNTLIGGYTHMN 315
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + S+L ACA L A+++G+ H ++ + + S
Sbjct: 316 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 375
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A++ FD I + WNAMI G+ +G +A +IF M++
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDS--ILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+++P+ +FV +LSAC H+G +D IF M +D+ + PK EH+GCM+DLLG SG E
Sbjct: 434 EIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I + EP ++ SLL AC + N +LGE A L ++EP+NP +V+LSNIYA
Sbjct: 494 AEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYAT 553
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V +IR ++ND+ + K+PG S+
Sbjct: 554 AGRWNEVAKIRALLNDKGMKKVPGCSS 580
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 196/382 (51%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF ++ +CA + G+Q+HG LK+ D + T+L+ MY++ G L A V
Sbjct: 101 PNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++ +I G G A ++F+ + + D +WN+MISG+++ G
Sbjct: 161 FDQ-SSHRDVVSYTALITGYASKGYIASAQKMFDEIPIK----DVVSWNAMISGYAETGN 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + SV+SACA ++++LG++ H + + + A
Sbjct: 216 NKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 275
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y+KCG+ A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 276 LIDLYIKCGEVETACGLFEGLSYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G ++ I ++ G+ H ++D+ + G ++ A+
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 393
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H ++ ++ M+ E+EP++ T +LS ++G
Sbjct: 394 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 453
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 454 M---LDLGRHIFRSMKEDYKIT 472
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 176/408 (43%), Gaps = 89/408 (21%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL---KCGCLPCAHNVFQE 71
+S++ C +L Q R +H +K + + L++ + LP A +VF+
Sbjct: 6 LSLLHNCKTL---QSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
++ N+L WNTM G L+ DP +
Sbjct: 63 IQ-EPNLLIWNTMFRGHALSS-------------------DPVS---------------- 86
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A L+ M S G++P+ +L +CA A + G++ HGHV++ + D + T+LIS
Sbjct: 87 ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 146
Query: 192 MYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAFWNAM 222
MY++ G+ AR+ FDQ EI D WNAM
Sbjct: 147 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 206
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY G + A+E+F M + V+P+ ++ V+V+SAC + ++ Q+ + +DD G
Sbjct: 207 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDH-G 265
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM 342
+ ++DL + G ++ A L L V +++L+G + H+N L +E +
Sbjct: 266 FGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG-YTHMN--LYKEALL 322
Query: 343 KLQEM--EPENPTPFVILSNIYA-------GLGRWEDVGRIRQMINDR 381
QEM E+P +LS + A +GRW I IN R
Sbjct: 323 LFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRW-----IHVYINKR 365
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 22/253 (8%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L ++ GR +H K K + + T+L+DMY KCG +
Sbjct: 332 ESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEA 391
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +R++ +WN MI G ++GR+ A ++F + +PD T+ ++S S
Sbjct: 392 AQQVFDSIL-NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACS 450
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M + + P L+ C+ +L L KE + ++
Sbjct: 451 HSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSG------LFKEAEEMINTMEME 504
Query: 181 KDESMATALI---SMY--MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D + +L+ MY ++ G+ S+A+ +I+P +P + + + Y G +
Sbjct: 505 PDGVIWCSLLKACKMYANVELGE-SYAQNL---IKIEPKNPGSYVLLSNIYATAGRWNEV 560
Query: 236 VEIFDLMQQEKVK 248
+I L+ + +K
Sbjct: 561 AKIRALLNDKGMK 573
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 211/382 (55%), Gaps = 44/382 (11%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-------- 101
TA++ Y++ G + A +F + RN+++W M+ G++ +GR ++A +LF
Sbjct: 60 TAMIRGYVQEGLIEEAELLFWRMP-ERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDV 118
Query: 102 -------EGLAHEGF-------------------------KPDPATWNSMISGFSQLGMR 129
+GL EG + D TW++MI + + G
Sbjct: 119 VASTNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFE 178
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF MQ G+ PS V SVLS C L++L G++ H ++R+ + D +++ L
Sbjct: 179 LEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVL 238
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY+KCG A+R FD+F K D WN++I+GY ++G E A+E+F M + P
Sbjct: 239 ITMYIKCGDLVTAKRVFDRFSSK--DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP 296
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VLSAC + G V + L+IF M + + PK EH+ CMVDLLGR+G+L+EA L
Sbjct: 297 DEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNL 356
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P E V+ +LLGAC H N DL E A KL ++EP N P+++LSN+Y+ RW
Sbjct: 357 IENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSRW 416
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+DV +R+ + + L K PG S
Sbjct: 417 KDVVELRKTMRAKNLRKSPGCS 438
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + ISV+S C SL L GRQVH ++ + D + + L+ MY+KCG L A V
Sbjct: 195 PSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRV 254
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F S++I+ WN++IAG +G EKA+E+F + PD T+ ++S S G
Sbjct: 255 FDRF-SSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGK 313
Query: 129 RFEAFKLFEKMQSTGMV 145
E ++FE M+S V
Sbjct: 314 VKEGLEIFESMKSKYQV 330
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N ++WN +++G + NG +A ++F+ + + +W +MI G+ Q G+ EA LF
Sbjct: 24 NTISWNGLVSGYVQNGMISEARKVFDKMPER----NVVSWTAMIRGYVQEGLIEEAELLF 79
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M +V T +L + + ++ + D+ +M L S
Sbjct: 80 WRMPERNVV----SWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSE---- 131
Query: 197 GQPSWARRFFDQFEIK-----------PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
G+ AR FD+ + D W+ MI Y R G A+ +F LMQ+E
Sbjct: 132 GRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQRE 191
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
V+P+ S ++VLS CG +D Q+ + +
Sbjct: 192 GVRPSFPSVISVLSVCGSLASLDHGRQVHSQL 223
>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 689
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 220/384 (57%), Gaps = 8/384 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T V+ +CA L + GR VHG L++ + D +G +L+DMY+KCG + A +F
Sbjct: 180 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 239
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R++ +WN +IAG M G A +LFE + H +W +MISG++Q G
Sbjct: 240 DKMI-VRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSWTAMISGYTQNGFA 294
Query: 130 FEAFKLFEKMQSTG--MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF++M G M P+ + SVL ACA +AL+ G+ H L+ + S+ T
Sbjct: 295 EQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQT 354
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KC AR FD + WN MI+ Y +G AV IF+ M + V
Sbjct: 355 ALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGV 414
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P++ +F+ +LS C H+G +D L F M ++P+ EH+ C+VDLLGR+GRL EA+
Sbjct: 415 QPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAK 474
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI ++P + SV+ +LL AC H N ++ E A +L +EP+N +V+LSN+YA G
Sbjct: 475 ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAG 534
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WE+V ++R ++ + + K PG S
Sbjct: 535 MWEEVKKLRALLKYQGMKKSPGCS 558
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 52/342 (15%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
++ L P+ ++ + +++ G+Q H + Q + + +V MY G
Sbjct: 67 LQPILQHFPHPSSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSG 126
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF + ++L +N++I +G E A F
Sbjct: 127 DLDSAVVVFDRIDNPSSLL-YNSIIRAYTRHGXXXXXXXXLEAYARMHF----------- 174
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
LG+ + F L VL +CADLS + +G+ HG +R L
Sbjct: 175 -----LGLLGDNFTL----------------PFVLKSCADLSRVCMGRCVHGQGLRVGLE 213
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI MY+KCG AR+ FD+ ++ D A WNA+I+GY + GE A ++F+
Sbjct: 214 GDFYVGASLIDMYVKCGVIGDARKLFDKMIVR--DMASWNALIAGYMKEGEIGVAEDLFE 271
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGR 299
M+ N S+ A++S G ++AL +F M+ D +KP ++ +
Sbjct: 272 RMEHR----NIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQ 327
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
S L+ R + H HLNS + +A
Sbjct: 328 SAALERGRRI------------HDFANGIGLHLNSSVQTALA 357
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV+ ACA L+ GR++H I ++ + TAL MY KC L A
Sbjct: 312 KPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARC 371
Query: 68 VFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F + + +N++ WNTMI +G +A+ +FE + G +PD T+ ++SG S
Sbjct: 372 CFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHS 431
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ F M G + S++ + DL LG+ G ++ A
Sbjct: 432 GLIDAGLNHFNDM---GTIHSVEPRVEHYACVVDL----LGRA--GRLVEAK-------- 474
Query: 187 TALIS-MYMKCGQPSW-------------------ARRFFDQFEIKPDDPAFWNAMISGY 226
LIS M M+ G W ARR F ++PD+ + + + Y
Sbjct: 475 -ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL---FVLEPDNSGNYVLLSNLY 530
Query: 227 GRNGEYESAVEIFDLMQQEKVK 248
G +E ++ L++ + +K
Sbjct: 531 AEAGMWEEVKKLRALLKYQGMK 552
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 226/424 (53%), Gaps = 49/424 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T ISV+ CA+ L G+ VH L +K + L+DMY KCG L A VF+++
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA------------------ 114
G RN+++W +MIAG +GRS+ A++L + + EG K D
Sbjct: 313 -GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 115 -----------------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMV----------PS 147
N+++ +++ G A +F M ++ P
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPD 431
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ + VL ACA LSAL+ GKE HG+++R + D +A AL+ +Y+KCG AR FD
Sbjct: 432 SRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
I D W MI+GYG +G A+ F+ M+ ++P+ SF+++L AC H+G +
Sbjct: 492 M--IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLG 326
++ + F +M +DF ++PK EH+ CMVDLL R+G L +A E I LP P +++ +LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLC 609
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
C + + +L E++A ++ E+EPEN +V+L+NIYA +WE+V R+R+ I + L K
Sbjct: 610 GCRNYHDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKN 669
Query: 387 PGIS 390
PG S
Sbjct: 670 PGCS 673
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 24/341 (7%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C E + T+ SV+ CA L G++VH + D +G LV Y CG L
Sbjct: 92 CKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLK 151
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH---EGFKPDPA------ 114
VF ++ +N+ WN M++ G ++++ LF+ + EG +P+ A
Sbjct: 152 EGRRVFDTME-KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK 210
Query: 115 -------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
+WNSMISG+ G+ ++++M G+ L + SVL CA+ L LG
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG 270
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
K H I++ + + + L+ MY KCG A R F++ + + W +MI+GY
Sbjct: 271 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEK--MGERNVVSWTSMIAGYT 328
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
R+G + A+++ M++E VK + + ++L AC +G +D + + + +
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN---NMES 385
Query: 288 EHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
F C ++D+ + G ++ A + + + +++++G
Sbjct: 386 NLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 135/347 (38%), Positives = 201/347 (57%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + ++ Y+ CG L A +FQ++ ++++++WNTMIAG +G+ KA+ +F +
Sbjct: 352 DAVCWNTMISGYVHCGMLDEAMVLFQQMP-NKDMVSWNTMIAGYAHDGQMRKAVGIFRKM 410
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ +WNS+ISGF Q G+ EA + F M+ LSACADL+AL
Sbjct: 411 NQR----NTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAAL 466
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+G++ H + R+ D ALIS Y KCG+ AR+ FD E+ D WNA+I
Sbjct: 467 HVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFD--EMPAPDIVSWNALID 524
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY NG A+ +F M+ V+P+ +FV VLSAC HAG +D+ F M D+ L+
Sbjct: 525 GYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALR 584
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+ CMVDLLGRSGRL EA E+I+ + +P V+ ++LGAC H N +L + A K
Sbjct: 585 PVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEK 644
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E+EP + +V+LSNI A G+W++ +R I +R + K PG++
Sbjct: 645 LYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGLA 691
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 135/305 (44%), Gaps = 34/305 (11%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G L A +F + SRN +++N M++ + +GR A LF+ + + + +WN
Sbjct: 23 RSGQLAAARRLFDSMP-SRNTVSYNAMLSALARHGRIADARRLFDEIP----RRNTVSWN 77
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI+ S G +A LF+ M + T ++S A L L ++ + R
Sbjct: 78 AMIAACSDHGRVADARDLFDAMPARDGFS----WTLMVSCYARAGELGLARDA---LDRM 130
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA----FWNAMISGYGRNGEYE 233
+K + A+IS Y K G RF D + + PA WN+++ G RNGE
Sbjct: 131 PGDKCTACYNAMISGYAKHG------RFDDAVALLREMPAPDIISWNSVLVGLTRNGEMV 184
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
AV+ FD M + S+ +L AG VD A +F + P + +
Sbjct: 185 RAVKFFDEMPARDM----VSWNLMLEGYVRAGDVDSAAGLFAGVP-----SPNVVSWVTL 235
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
++ R+GR+ EAREL +P+ V+ ++ +L +L EE EM +N
Sbjct: 236 LNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSG---YLRLSHMEEAYKLFTEMPDKNSI 292
Query: 354 PFVIL 358
+ +
Sbjct: 293 SWTTM 297
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +SACA L L GRQ H L + D+ G AL+ Y KCG + A VF E+
Sbjct: 452 TYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEM 511
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+I++WN +I G NG +A+ +F + +PD T+ ++S S G+ E
Sbjct: 512 PAP-DIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEG 570
Query: 133 FKLFEKM 139
F F M
Sbjct: 571 FDFFNSM 577
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 166/394 (42%), Gaps = 48/394 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG------TALVDMYLKCGCLP 63
N+V++ ++I+AC+ HG D M T +V Y + G L
Sbjct: 72 NTVSWNAMIAACSD----------HGRVADARDLFDAMPARDGFSWTLMVSCYARAGELG 121
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A + + G + +N MI+G +GR + A+ L E PD +WNS++ G
Sbjct: 122 LARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLR----EMPAPDIISWNSVLVGL 177
Query: 124 SQLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++ G A K F++M + MV +L V + D +A +V+
Sbjct: 178 TRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVV------- 230
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDL 241
S T L++ Y + G+ AR FD+ PD + A WN M+SGY R E A ++F
Sbjct: 231 -SWVT-LLNGYCRAGRIGEARELFDRI---PDRNVAAWNVMLSGYLRLSHMEEAYKLFTE 285
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRS 300
M + NS S+ ++SA G + +A + M D F K H G + +S
Sbjct: 286 MPDK----NSISWTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMH-GYL-----QS 335
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+D+AR + L +++++ +++ + +E + Q+M ++ + +
Sbjct: 336 KMIDDARLIFDGLEVRDAVCWNTMISG---YVHCGMLDEAMVLFQQMPNKDMVSWNTMIA 392
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G+ I + +N R + +G
Sbjct: 393 GYAHDGQMRKAVGIFRKMNQRNTVSWNSVISGFV 426
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 37/290 (12%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
+T+ A++ + G + A +F E+ RN ++WN MIA +GR A +LF+ +
Sbjct: 41 NTVSYNAMLSALARHGRIADARRLFDEIP-RRNTVSWNAMIAACSDHGRVADARDLFDAM 99
Query: 105 -AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
A +GF +W M+S +++ G A ++M P KC +AC +A
Sbjct: 100 PARDGF-----SWTLMVSCYARAGELGLARDALDRM------PGDKC-----TAC--YNA 141
Query: 164 LKLGKETHGHVIRADLNKDESMATALISM------YMKCGQPSWARRFFDQFEIKPDDPA 217
+ G HG A E A +IS + G+ A +FFD E+ D
Sbjct: 142 MISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEMVRAVKFFD--EMPARDMV 199
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN M+ GY R G+ +SA +F + PN S+V +L+ AG + +A ++F +
Sbjct: 200 SWNLMLEGYVRAGDVDSAAGLFAGVPS----PNVVSWVTLLNGYCRAGRIGEARELFDRI 255
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
D + M+ R ++EA +L E+P+ + +++ A
Sbjct: 256 PD-----RNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISA 300
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 136/365 (37%), Positives = 214/365 (58%), Gaps = 9/365 (2%)
Query: 29 FGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAG 87
G Q+H L L+ SDT + +LV +Y C + A +VF E+ R+++ WN MIAG
Sbjct: 96 LGPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEM-AVRDVVAWNVMIAG 154
Query: 88 MMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
+ G A ELF+ + +W ++I G++Q+ EA ++F +MQ G+ P
Sbjct: 155 YVKAGDLAHARELFDAMPERNV----VSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPD 210
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ SVLSAC DL A+ LG+ H V+R L ++ + ++I MYMKCG A F+
Sbjct: 211 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFE 270
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
E K W +I+G+ +G AVE+F M++E + PN +F+A+LSAC H G
Sbjct: 271 GMEEK--SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLT 328
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLG 326
D F +M + +KP+ EH+GCMVDLLGR+G L EA++L++++P + +++ +LL
Sbjct: 329 DLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLA 388
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
A H ++DLGEE + L E+EP N +++LSNI+A RW+DV ++R+ + +R L +
Sbjct: 389 ASRTHGDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNV 448
Query: 387 PGISA 391
PG S+
Sbjct: 449 PGASS 453
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V +SV+SAC L + G VH ++ + + + +++DMY+KCGC+ A
Sbjct: 208 EPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVE 267
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++++TW T+IAG L+G +A+E+F + E P+ T+ +++S S +G
Sbjct: 268 VFEGME-EKSVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVG 326
Query: 128 M 128
+
Sbjct: 327 L 327
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTL---KIEKQSDTMIGTALVDMYLKCGCLPCA 65
PN VTF++++SAC+ + GR + + +I+ Q + +VD+ + GCL A
Sbjct: 310 PNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHY--GCMVDLLGRAGCLKEA 367
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSE 95
++ +++ N W ++A +G ++
Sbjct: 368 QDLVKDMPLKANAAIWGALLAASRTHGDAD 397
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 140/380 (36%), Positives = 223/380 (58%), Gaps = 9/380 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
VIS CA L + +H +K + + + +AL+ +Y K G + A N+F E+K ++
Sbjct: 184 VISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEMK-NK 242
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEG----FKPDPATWNSMISGFSQLGMRFEA 132
++ +WN +I G ++A+E+F L G +P+ +W+++I GF+ G EA
Sbjct: 243 SLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEA 302
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ ++ + +++VLS CA+L+AL LG+E HGHV+RA + + + L++M
Sbjct: 303 LELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNM 362
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG F++ E K D WN+MI+GYG +G +A+E FD M + KP+
Sbjct: 363 YAKCGCLKEGHMIFEKTERK--DLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGV 420
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FVAVLS+C H+G V + ++F M + ++P+ EH+ CMVDLLGR+G L EA E+++
Sbjct: 421 TFVAVLSSCSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKN 480
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT-PFVILSNIYAGLGRWED 370
+P P V+ +LL +C H N+++ EE A L + T +++LSNIYA GRWED
Sbjct: 481 MPVAPNACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWED 540
Query: 371 VGRIRQMINDRQLTKLPGIS 390
R+R + L K PG S
Sbjct: 541 SARVRTSAKTKGLKKNPGQS 560
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 142/270 (52%), Gaps = 7/270 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF VI ACA + G+ +HG L++ QS +G L+ MY K G + A ++F +
Sbjct: 44 TFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRM 103
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++WNTM++ N A+E+F+ + EG +P+ TW S+IS +++ G EA
Sbjct: 104 S-VRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEA 162
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF M+ G+ S + + V+S CADL A K H + ++ + + +ALI +
Sbjct: 163 MELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICV 222
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE----KVK 248
Y K G + A F E+K A WNA+I+ + G + A+EIF +++ +++
Sbjct: 223 YGKHGDVNGAWNLF--LEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLR 280
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMD 278
PN S+ A++ G +AL++F M
Sbjct: 281 PNVVSWSAIIDGFASKGREKEALELFRRMQ 310
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
N+VT +V+S CA L L GR++HG ++ ++ ++G LV+MY KCGCL H +
Sbjct: 316 ANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMI 375
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F++ + +++++WN+MI G ++G A+E F+ + GFKPD T+ +++S S G+
Sbjct: 376 FEKTE-RKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGL 434
Query: 129 RFEAFKLFEKM 139
E +LF++M
Sbjct: 435 VHEGRRLFDQM 445
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 213/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P SVTF S+ A A L L G+++HG +K + +G+A++DMY KCG L A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + +EK D WNSMI+ SQ G
Sbjct: 418 VFNRI---------------------TEK---------------DAICWNSMITSCSQNG 441
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G ++ LSACA+L AL GKE HG +I+ L D +
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAES 501
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG +++RR FD+ + + + WN++IS YG +G+ + + +F M + +
Sbjct: 502 SLIDMYAKCGNLNFSRRVFDRMQER--NEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ ++SACGHAG VD+ ++ + +M +++G+ + EH+ C+ D+ GR+GRLDEA
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAF 619
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I +P P V+ +LLGAC H N +L E + L +++P N +V+L+N+ AG G
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAG 679
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W V ++R ++ +R + K+PG S
Sbjct: 680 KWRKVLKVRSIMKERGVRKVPGYS 703
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 148/327 (45%), Gaps = 51/327 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVTF V+S CAS L G Q+HG+ + + D+ + L+ MY KC CL A
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARK 215
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F S D +WN +ISG+ Q G
Sbjct: 216 LFDTSPQS------------------------------------DLVSWNGIISGYVQNG 239
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF M S G+ P S L +L +LK KE HG++IR + D + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI +Y KC A++ Q D MISGY NG+ + A+E F + QE++
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSS--SFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 248 KPNSASFVAVLSACG--HAGHVDKALQ---IFTMMDDDFGLKPKQEHFG-CMVDLLGRSG 301
KP S +F ++ A A ++ K L I T +D+ + H G ++D+ + G
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDE-------KCHVGSAILDMYAKCG 410
Query: 302 RLDEARELIRELPEPTVSVYHSLLGAC 328
RLD A + + E ++S++ +C
Sbjct: 411 RLDLACRVFNRITEKDAICWNSMITSC 437
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 47/357 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+TF S + LL L+ +++HG ++ D + +AL+D+Y KC
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC-------- 308
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ +E+ + + + D +MISG+ G
Sbjct: 309 ----------------------------RDVEMAQKILCQSSSFDTVVCTTMISGYVLNG 340
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F + M P+ +S+ A A L+AL LGKE HG +I+ L++ + +
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG+ A R F++ I D WN+MI+ +NG A+ +F M E
Sbjct: 401 AILDMYAKCGRLDLACRVFNR--ITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + S LSAC + + +I +M L+ ++D+ + G L+ +R
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAKCGNLNFSR 517
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
+ + E ++S++ A H DL E +A+ EM +P++ T I+S
Sbjct: 518 RVFDRMQERNEVSWNSIISAYGNH--GDLKECLAL-FHEMLRNGIQPDHVTFLGIIS 571
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 3/212 (1%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
+ WN MI GF+ +G A + KM G+ P V+ AC L ++K+GK H
Sbjct: 24 SAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHET 83
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
V L +D + ++LI +Y + G S A+ FD I D WN M++GY +NG+
Sbjct: 84 VNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN--IPQKDSVLWNVMLNGYVKNGDSG 141
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+A++IF M+ ++KPNS +F VLS C +D Q+ + GL+ +
Sbjct: 142 NAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIA-VSCGLELDSPVANTL 200
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + + L AR+L P+ + ++ ++
Sbjct: 201 LAMYSKCQCLQAARKLFDTSPQSDLVSWNGII 232
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 38/250 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ AC L ++ G+ VH + + D +G++L+ +Y +
Sbjct: 56 PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE---------- 105
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
NG A LF+ + + D WN M++G+ + G
Sbjct: 106 ----------------------NGHLSDAQYLFDNIPQK----DSVLWNVMLNGYVKNGD 139
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A K+F +M+ + + P+ VLS CA + L LG + HG + L D +A
Sbjct: 140 SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANT 199
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KC AR+ FD D WN +ISGY +NG A +F M +K
Sbjct: 200 LLAMYSKCQCLQAARKLFDT--SPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIK 257
Query: 249 PNSASFVAVL 258
P+S +F + L
Sbjct: 258 PDSITFASFL 267
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 220/386 (56%), Gaps = 12/386 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDT----MIGTALVDMYLKCGCLPCA 65
+ T+ SV+SACA+ + G+QVH L+ E + + AL +Y KCG + A
Sbjct: 290 DEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEA 349
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN +++G + GR ++A FE + TW MISG +Q
Sbjct: 350 RQVFNQMP-VKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNL----LTWTVMISGLAQ 404
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E+ KLF +M+S G P + ACA L+AL G++ H ++R + S
Sbjct: 405 NGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSA 464
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI+MY KCG A F + D WNAMI+ G++G A+E+F+LM +E
Sbjct: 465 GNALITMYAKCGVVEAAHCLF--LTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKE 522
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ P+ +F+ VLS C HAG V++ + F M +G+ P ++H+ M+DLL R+G+ E
Sbjct: 523 DILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSE 582
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+++I +P EP ++ +LL C H N DLG + A +L E+ P++ +V+LSN+YA
Sbjct: 583 AKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYAT 642
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+GRW+DV ++R+++ D+ + K PG S
Sbjct: 643 VGRWDDVAKVRKLMRDKGVKKEPGCS 668
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 155/320 (48%), Gaps = 26/320 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFG-RQVHGLTLKIEKQSDTMIGTALVDMYLKCGC----- 61
P++ TF SV+ A A ++ + +Q+H +K T + AL+ +++KC
Sbjct: 146 RPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVS 205
Query: 62 ----LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ A +F E+ R+ L+W TMIAG + NG + A + +G+ + WN
Sbjct: 206 SSSLMAAARKLFDEMT-ERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLV----VAWN 260
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MISG+ G EA ++F KM G+ TSVLSACA+ GK+ H +++R
Sbjct: 261 AMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320
Query: 178 D----LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+ L+ S+ AL ++Y KCG+ AR+ F+Q +K D WNA++SGY G +
Sbjct: 321 EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK--DLVSWNAILSGYVNAGRID 378
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A F+ M + N ++ ++S G +++L++F M + G +P F
Sbjct: 379 EAKSFFEEMPER----NLLTWTVMISGLAQNGFGEESLKLFNRMKSE-GFEPCDYAFAGA 433
Query: 294 VDLLGRSGRLDEARELIREL 313
+ L R+L +L
Sbjct: 434 IIACAWLAALMHGRQLHAQL 453
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 158/385 (41%), Gaps = 76/385 (19%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK---------------- 73
R VH + + I L+D+Y K L AH++F E++
Sbjct: 34 ARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSS 93
Query: 74 ----------------GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
G R+ + +N MI G N A+ELF L GF+PD T+
Sbjct: 94 AGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFT 153
Query: 118 SMISGFSQLGMRFEAFKLFEKMQ------STGMVPS-LKCVTSVLSACADL--------- 161
S++ L + E K +++ +G V S L + SV CA
Sbjct: 154 SVLGA---LALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLM 210
Query: 162 -SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
+A KL E +DE T +I+ Y++ G+ AR+F D K WN
Sbjct: 211 AAARKLFDEM--------TERDELSWTTMIAGYVRNGELDAARQFLDGMTEKL--VVAWN 260
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM--- 277
AMISGY +G + A+E+F M ++ + ++ +VLSAC +AG Q+ +
Sbjct: 261 AMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT 320
Query: 278 ----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
DF L + L + G++DEAR++ ++P + ++++L ++N
Sbjct: 321 EPRPSLDFSLSVNN----ALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSG---YVN 373
Query: 334 SDLGEEMAMKLQEMEPENPTPFVIL 358
+ +E +EM N + ++
Sbjct: 374 AGRIDEAKSFFEEMPERNLLTWTVM 398
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 117/277 (42%), Gaps = 47/277 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F I ACA L L GRQ+H +++ S G AL+ MY KCG + AH
Sbjct: 424 EPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHC 483
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ +WN MIA + +G +A+ELFE + E PD T+ +++S S G
Sbjct: 484 LFLTMPYLDSV-SWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAG 542
Query: 128 MRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E + F+ M G+ P E
Sbjct: 543 LVEEGHRYFKSMSGLYGICPG-----------------------------------EDHY 567
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----YESAVEIFDLM 242
+I + + G+ S A+ + ++P P W A+++G +G ++A +F+LM
Sbjct: 568 ARMIDLLCRAGKFSEAKDMIETMPVEP-GPPIWEALLAGCRIHGNMDLGIQAAERLFELM 626
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q + ++V + + G D ++ +M D
Sbjct: 627 PQ-----HDGTYVLLSNMYATVGRWDDVAKVRKLMRD 658
>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 220/384 (57%), Gaps = 8/384 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T V+ +CA L + GR VHG L++ + D +G +L+DMY+KCG + A +F
Sbjct: 106 DNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLF 165
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R++ +WN +IAG M G A +LFE + H +W +MISG++Q G
Sbjct: 166 DKMI-VRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSWTAMISGYTQNGFA 220
Query: 130 FEAFKLFEKMQSTG--MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF++M G M P+ + SVL ACA +AL+ G+ H L+ + S+ T
Sbjct: 221 EQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQT 280
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KC AR FD + WN MI+ Y +G AV IF+ M + V
Sbjct: 281 ALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGV 340
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P++ +F+ +LS C H+G +D L F M ++P+ EH+ C+VDLLGR+GRL EA+
Sbjct: 341 QPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAK 400
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI ++P + SV+ +LL AC H N ++ E A +L +EP+N +V+LSN+YA G
Sbjct: 401 ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAG 460
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WE+V ++R ++ + + K PG S
Sbjct: 461 MWEEVKKLRALLKYQGMKKSPGCS 484
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+ +M G++ + VL +CADLS + +G+ HG +R L D + +LI MY+K
Sbjct: 95 YARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVK 154
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG AR+ FD+ ++ D A WNA+I+GY + GE A ++F+ M+ N S+
Sbjct: 155 CGVIGDARKLFDKMIVR--DMASWNALIAGYMKEGEIGVAEDLFERMEHR----NIVSWT 208
Query: 256 AVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
A++S G ++AL +F M+ D +KP ++ +S L+ R +
Sbjct: 209 AMISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRI----- 263
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMA 341
H HLNS + +A
Sbjct: 264 -------HDFANGIGLHLNSSVQTALA 283
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 42/262 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV+ ACA L+ GR++H I ++ + TAL MY KC L A
Sbjct: 238 KPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARC 297
Query: 68 VFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F + + +N++ WNTMI +G +A+ +FE + G +PD T+ ++SG S
Sbjct: 298 CFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHS 357
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ F M G + S++ + DL LG+ G ++ A
Sbjct: 358 GLIDAGLNHFNDM---GTIHSVEPRVEHYACVVDL----LGRA--GRLVEAK-------- 400
Query: 187 TALIS-MYMKCGQPSW-------------------ARRFFDQFEIKPDDPAFWNAMISGY 226
LIS M M+ G W ARR F ++PD+ + + + Y
Sbjct: 401 -ELISQMPMQAGPSVWGALLAACRSHRNLEIAELAARRL---FVLEPDNSGNYVLLSNLY 456
Query: 227 GRNGEYESAVEIFDLMQQEKVK 248
G +E ++ L++ + +K
Sbjct: 457 AEAGMWEEVKKLRALLKYQGMK 478
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 218/383 (56%), Gaps = 12/383 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDT----MIGTALVDMYLKCGCLPCAHNV 68
T+ SVISACA + G+QVH LK E D +G L+ +Y K G + A +
Sbjct: 291 TYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKYGKVDGARKI 350
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ ++I+TWNT+++G + GR E+A F + + TW MISG +Q G
Sbjct: 351 FYEMP-VKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNL----LTWTVMISGLAQNGF 405
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A KLF +M+ G P+ ++AC+ L AL+ G++ H ++ + S+ A
Sbjct: 406 GEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNA 465
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I+MY +CG AR F + DP WN+MI+ G++G A+E+++ M +E +
Sbjct: 466 MITMYARCGIVEAARTMF--LTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGIL 523
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC HAG V++ + F M +++G+ P ++H+ M+DL R+G+ +A+
Sbjct: 524 PDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKN 583
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P E ++ +LL C H N DLG E A KL ++ P++ +V+LSN+YA LGR
Sbjct: 584 VIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGR 643
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W DV R R+++ DR + K P S
Sbjct: 644 WNDVARTRKLMRDRGVKKEPACS 666
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/317 (30%), Positives = 154/317 (48%), Gaps = 28/317 (8%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC---- 61
+P+ TF SV+SA + Y Q G Q+HG +K + + AL+ +Y+KC
Sbjct: 144 QPDDFTFASVLSASTLIFYDERQCG-QMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLV 202
Query: 62 -----LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ A +F E+ RN W T+I G + NG A E+ + + + P A W
Sbjct: 203 SSSSLMASARKLFDEMP-KRNEFIWTTLITGYVRNGDLTGAREILDTMTEQ---PGIA-W 257
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N+MISG+ G+ +A LF KM+ G+ TSV+SACAD LGK+ H ++++
Sbjct: 258 NAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILK 317
Query: 177 ADLNKDE----SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+LN D S+ LI++Y K G+ AR+ F +E+ D WN ++SGY G
Sbjct: 318 NELNPDRDFLLSVGNTLITLYWKYGKVDGARKIF--YEMPVKDIITWNTLLSGYVNAGRM 375
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
E A F M ++ N ++ ++S G ++AL++F M D G +P F
Sbjct: 376 EEAKSFFAQMPEK----NLLTWTVMISGLAQNGFGEQALKLFNQMKLD-GYEPNDYAFAG 430
Query: 293 MVDLLGRSGRLDEAREL 309
+ G L+ R+L
Sbjct: 431 AITACSVLGALENGRQL 447
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 153/340 (45%), Gaps = 43/340 (12%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELF 101
Q D + T L+ Y G L A +F E R+ + +N MI G A+ELF
Sbjct: 76 QPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELF 135
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA---- 157
+ F+PD T+ S++S + + F + +M T + ++ +VL+A
Sbjct: 136 RAMRWANFQPDDFTFASVLSASTLI---FYDERQCGQMHGTVVKFGIEIFPAVLNALLSV 192
Query: 158 ---CADL----------SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
CA SA KL E ++E + T LI+ Y++ G + AR
Sbjct: 193 YVKCASSPLVSSSSLMASARKLFDEMP--------KRNEFIWTTLITGYVRNGDLTGARE 244
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
D +P WNAMISGY +G +E A+ +F M+ V+ + +++ +V+SAC
Sbjct: 245 ILDTMTEQPGIA--WNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADG 302
Query: 265 GH--VDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTV 318
G + K + + + ++ L P ++ ++ L + G++D AR++ E+P +
Sbjct: 303 GFFLLGKQVHAYILKNE---LNPDRDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVKDI 359
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+++LL ++N+ EE +M +N + ++
Sbjct: 360 ITWNTLLSG---YVNAGRMEEAKSFFAQMPEKNLLTWTVM 396
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 42/243 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN F I+AC+ L L+ GRQ+H + + S +G A++ MY +CG + A
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAART 481
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + ++WN+MIA + +G KA+EL+E + EG PD T+ +++S S G
Sbjct: 482 MFLTMPFV-DPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAG 540
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E + F M ++ G+ P E
Sbjct: 541 LVEEGNRYFNSMLENYGIAPG-----------------------------------EDHY 565
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----YESAVEIFDLM 242
+I ++ + G+ S A+ D + P W A+++G +G E+A ++F L+
Sbjct: 566 ARMIDLFCRAGKFSDAKNVIDSMPFEARAP-IWEALLAGCRTHGNMDLGIEAAEKLFKLI 624
Query: 243 QQE 245
Q
Sbjct: 625 PQH 627
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD----- 214
+LS+ L + HGHVI + + LI +Y K +AR+ FD+ +PD
Sbjct: 25 NLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIP-QPDVIART 83
Query: 215 ---------------------------DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
D F+NAMI+GY + SA+E+F M+
Sbjct: 84 TLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANF 143
Query: 248 KPNSASFVAVLSA 260
+P+ +F +VLSA
Sbjct: 144 QPDDFTFASVLSA 156
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 217/385 (56%), Gaps = 41/385 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ PN+VTF +V+ ACA L +L G+++H +++ D + AL DMY KCGCL A
Sbjct: 439 ETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQ 498
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
NVF NI D ++N +I G+S+
Sbjct: 499 NVF-------NISV------------------------------RDEVSYNILIIGYSRT 521
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
E+ +LF +M+ GM P + V+SACA+L+ ++ GKE HG ++R + +A
Sbjct: 522 NDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVA 581
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L+ +Y +CG+ A + F + I+ D A WN MI GYG GE ++A+ +F+ M+++
Sbjct: 582 NSLLDLYTRCGRIDLATKVF--YCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDG 639
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+ +S SFVAVLSAC H G ++K + F MM D ++P H+ CMVDLLGR+G ++EA
Sbjct: 640 VEYDSVSFVAVLSACSHGGLIEKGRKYFKMM-CDLNIEPTHTHYACMVDLLGRAGLMEEA 698
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LIR L P +++ +LLGAC H N +LG A L E++P++ +++LSN+YA
Sbjct: 699 ADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEA 758
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RW++ ++R+++ R K PG S
Sbjct: 759 ERWDEANKVRELMKSRGAKKNPGCS 783
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 154/321 (47%), Gaps = 46/321 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT S++ L + G +VHG +LK+ +SD I +L+DMY K G A
Sbjct: 339 RPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAST 398
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ G RNI++WN +MI+ F++
Sbjct: 399 IFNKM-GVRNIVSWN-----------------------------------AMIANFARNR 422
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +EA +L +MQ+ G P+ T+VL ACA L L +GKE H +IR + D ++
Sbjct: 423 LEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSN 482
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KCG + A+ F+ I D +N +I GY R + ++ +F M+ +
Sbjct: 483 ALTDMYSKCGCLNLAQNVFN---ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGM 539
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLD 304
+P+ SF+ V+SAC + + + +I ++ K H ++DL R GR+D
Sbjct: 540 RPDIVSFMGVVSACANLAFIRQGKEIHGLLVR----KLFHTHLFVANSLLDLYTRCGRID 595
Query: 305 EARELIRELPEPTVSVYHSLL 325
A ++ + V+ +++++
Sbjct: 596 LATKVFYCIQNKDVASWNTMI 616
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 123/268 (45%), Gaps = 41/268 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAH 66
+P+ VT +SV+ CA R VH LK+ + +G ALVD+Y KCG +
Sbjct: 237 QPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASK 296
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ RN+++WN ++I+ FS
Sbjct: 297 KVFDEID-ERNVISWN-----------------------------------AIITSFSFR 320
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A +F M GM P+ ++S+L +L KLG E HG ++ + D ++
Sbjct: 321 GKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFIS 380
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG-EYESAVEIFDLMQQE 245
+LI MY K G A F++ ++ + WNAMI+ + RN EYE AVE+ MQ +
Sbjct: 381 NSLIDMYAKSGSSRIASTIFNKMGVR--NIVSWNAMIANFARNRLEYE-AVELVRQMQAK 437
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQI 273
PN+ +F VL AC G ++ +I
Sbjct: 438 GETPNNVTFTNVLPACARLGFLNVGKEI 465
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 153/368 (41%), Gaps = 54/368 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ V+ C+ + ++ GR+VHG+ K+ D +G L+ Y CG A
Sbjct: 134 KPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMK 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ + D +WN++I S G
Sbjct: 194 VFDEMP------------------------------------ERDKVSWNTVIGLCSLHG 217
Query: 128 MRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDES 184
EA F M + G+ P L V SVL CA+ + + H + ++ L
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVK 277
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ AL+ +Y KCG +++ FD EI + WNA+I+ + G+Y A+++F LM
Sbjct: 278 VGNALVDVYGKCGSEKASKKVFD--EIDERNVISWNAIITSFSFRGKYMDALDVFRLMID 335
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRS 300
E ++PNS + ++L G G +++ F LK E ++D+ +S
Sbjct: 336 EGMRPNSVTISSMLPVLGELGLFKLGMEV-----HGFSLKMAIESDVFISNSLIDMYAKS 390
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILS 359
G A + ++ + +++++ + L E +++M+ + TP V +
Sbjct: 391 GSSRIASTIFNKMGVRNIVSWNAMIAN---FARNRLEYEAVELVRQMQAKGETPNNVTFT 447
Query: 360 NIYAGLGR 367
N+ R
Sbjct: 448 NVLPACAR 455
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 135/282 (47%), Gaps = 16/282 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P+ V+F+ V+SACA+L +++ G+++HGL ++ + + +L+D+Y +CG +
Sbjct: 537 LGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDL 596
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ ++++ +WNTMI G + G + A+ LFE + +G + D ++ +++S S
Sbjct: 597 ATKVFYCIQ-NKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACS 655
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC-ADLSALKLGKETHGHVIRA-DLNKD 182
G+ + K F+ M + P T AC DL E +IR + D
Sbjct: 656 HGGLIEKGRKYFKMMCDLNIEP-----THTHYACMVDLLGRAGLMEEAADLIRGLSIIPD 710
Query: 183 ESMATALISMYMKCGQPS---WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ AL+ G WA FE+KP ++ + + Y ++ A ++
Sbjct: 711 TNIWGALLGACRIHGNIELGLWAAEHL--FELKPQHCGYYILLSNMYAEAERWDEANKVR 768
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+LM+ K N + HA V + + +DDDF
Sbjct: 769 ELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKID---SLDDDF 807
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 9/214 (4%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN++I S G+ F+ F + M G+ P VL C+D ++ G+E HG
Sbjct: 106 WNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAF 164
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + D + L++ Y CG A + FD E+ D WN +I +G YE A
Sbjct: 165 KLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFD--EMPERDKVSWNTVIGLCSLHGFYEEA 222
Query: 236 VEIFDLMQQEK--VKPNSASFVAVLSACGHAGHVDKAL-QIFTMMDDDFGLKPKQEHFG- 291
+ F +M K ++P+ + V+VL C DK + +I GL G
Sbjct: 223 LGFFRVMVAAKPGIQPDLVTVVSVLPVCAETE--DKVMARIVHCYALKVGLLGGHVKVGN 280
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+VD+ G+ G ++++ E+ E V +++++
Sbjct: 281 ALVDVYGKCGSEKASKKVFDEIDERNVISWNAII 314
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 9/183 (4%)
Query: 153 SVLSACADLSALKLGKETHGH-VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
++L C L K+ H + ++ L + S+ +LI Y G PS + F Q +
Sbjct: 39 NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLF-QHSV 97
Query: 212 KPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
AF WN +I G ++ ++ M + VKP+ ++ VL C V K
Sbjct: 98 AYSRSAFLWNTLIRANSIAGVFD-GFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKG 156
Query: 271 LQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
++ + F L + F ++ G G +A ++ E+PE +++++G C
Sbjct: 157 REVHGVA---FKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLC 213
Query: 329 WCH 331
H
Sbjct: 214 SLH 216
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/387 (36%), Positives = 212/387 (54%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++V+SACA ++ GRQ+H S+ I L+D+Y KCG
Sbjct: 194 KPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCG------- 246
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LF+GLA K D +WN++I G + +
Sbjct: 247 -------------------------EVETACGLFQGLA----KKDVISWNTLIGGHTHMN 277
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + SVL ACA L A+ +G+ H ++ + + S+
Sbjct: 278 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSL 337
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A++ FD + + WNAMI G+ +G+ +A ++F M++
Sbjct: 338 LTSLIDMYAKCGDIEAAKQVFDSMLTRS--LSSWNAMIFGFAMHGKANAAFDLFSKMRKN 395
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ P+ +FV +LSAC H+G +D IF M D+ + PK EH+GCM+DLLG G E
Sbjct: 396 GIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKE 455
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+E+IR +P EP ++ SLL AC H N +LGE A L ++EPENP +V+LSNIYA
Sbjct: 456 AKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYAT 515
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW+ V +IR ++ND+ + K PG S+
Sbjct: 516 AGRWDQVAKIRTLLNDKGIKKAPGCSS 542
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 189/382 (49%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS +F ++ +CA L G+Q+HG LK+ D + T+L+ MY + G L AH V
Sbjct: 63 PNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKV 122
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ +I G G A +LF+ ++ D +WN+MISG+ +
Sbjct: 123 FDR-SSHRHVVSYTALITGYASRGYINNARKLFDEIS----VKDVVSWNAMISGYVETCN 177
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +L++ M T + P + +V+SACA +++LG++ H + + +
Sbjct: 178 FKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNV 237
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F K D WN +I G+ Y+ A+ +F M +
Sbjct: 238 LIDLYSKCGEVETACGLFQGLAKK--DVISWNTLIGGHTHMNLYKEALLLFQEMLRSGES 295
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + ++VL AC H G +D I ++ G+ ++D+ + G ++ A+
Sbjct: 296 PNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAK 355
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H ++ ++ K+++ ++P++ T +LS ++G
Sbjct: 356 QVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSG 415
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 416 M---LDLGRHIFRSMSQDYKIT 434
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 158/334 (47%), Gaps = 35/334 (10%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A ++F+ ++ N+L WNTM G LN S A++L+ + G P+ ++ ++
Sbjct: 15 LSYAISIFETIQ-EPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK 73
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK-----LGKETHGHVIR 176
++ E ++ + G + TS++S A L+ + +H HV+
Sbjct: 74 SCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVS 133
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
TALI+ Y G + AR+ FD+ +K D WNAMISGY ++ A+
Sbjct: 134 ---------YTALITGYASRGYINNARKLFDEISVK--DVVSWNAMISGYVETCNFKEAL 182
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
E++ M + VKP+ ++ V V+SAC +G ++ Q+ + ++D G + ++DL
Sbjct: 183 ELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDH-GFGSNIKIVNVLIDL 241
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTP 354
+ G ++ A L + L + V +++L+G H + +L +E + QEM E+P
Sbjct: 242 YSKCGEVETACGLFQGLAKKDVISWNTLIGG---HTHMNLYKEALLLFQEMLRSGESPND 298
Query: 355 FVILSNIYA-------GLGRWEDVGRIRQMINDR 381
+LS + A +GRW I IN R
Sbjct: 299 VTMLSVLPACAHLGAIDIGRW-----IHVYINKR 327
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +SV+ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 294 ESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEA 353
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +R++ +WN MI G ++G++ A +LF + G PD T+ ++S S
Sbjct: 354 AKQVFDSML-TRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACS 412
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M Q + P L+ C+ +L C L KE + +
Sbjct: 413 HSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG------LFKEAKEMIRTMPME 466
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ + +I+P++P + + + Y G ++ +I
Sbjct: 467 PDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIR 526
Query: 240 DLMQQEKVK 248
L+ + +K
Sbjct: 527 TLLNDKGIK 535
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 219/384 (57%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T S++ AC+ + L +G ++HG L+ D IG +L+ +Y+ CG P A
Sbjct: 307 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG-KPFAAQ 365
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V LF+G+ H +WN MI+G+SQ G
Sbjct: 366 V-------------------------------LFDGMEHRSL----VSWNVMIAGYSQNG 390
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF +M S G+ P + V AC+ LSAL+LGKE H ++A L +D +++
Sbjct: 391 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSS 450
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I MY K G ++R FD+ ++ D A WN +I+GYG +G + A+E+F+ M + +
Sbjct: 451 SIIDMYAKGGCIGLSQRIFDR--LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 508
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F +L AC HAG V+ L+ F M + ++PK EH+ C+VD+LGR+GR+D+A
Sbjct: 509 KPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDAL 568
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI E+P +P ++ SLL +C H N LGE++A KL E+EPE P +V++SN++AG G
Sbjct: 569 RLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSG 628
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+DV R+R + D L K G S
Sbjct: 629 KWDDVRRVRGRMKDIGLQKDAGCS 652
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 171/366 (46%), Gaps = 51/366 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T VI ACA LL L G+ +HG+ K++ SD +G AL+ MY KCG + A
Sbjct: 205 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+L ++ + ++WN+++ G++Q
Sbjct: 265 RVFDLMDTKTV-----------------------------------SSWNALLCGYAQNS 289
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A L+ +M +G+ P + S+L AC+ + +L G+E HG +R L D +
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+S+Y+ CG+P A+ FD E + WN MI+GY +NG + A+ +F M + +
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRS--LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P + + V AC A + K L F + + +D + ++D+ + G
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSS------IIDMYAKGGC 461
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPT-PFVILS 359
+ ++ + L E V+ ++ ++ H E+ K+ ++P++ T ++++
Sbjct: 462 IGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMA 521
Query: 360 NIYAGL 365
+AGL
Sbjct: 522 CSHAGL 527
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 127/251 (50%), Gaps = 16/251 (6%)
Query: 1 MKECLSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLK 58
++ LSD +P + + V AC+ L L+ G+++H LK D + ++++DMY K
Sbjct: 399 FRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAK 458
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
GC+ + +F L+ +++ +WN +IAG ++GR ++A+ELFE + G KPD T+
Sbjct: 459 GGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTG 517
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADL-SALKLGKETHGH 173
++ S G+ + + F +M + + P L+ CV +L + AL+L +E G
Sbjct: 518 ILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPG- 576
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEY 232
+ D + ++L+S G + ++ E++P+ P + + + + +G++
Sbjct: 577 ------DPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKW 630
Query: 233 ESAVEIFDLMQ 243
+ + M+
Sbjct: 631 DDVRRVRGRMK 641
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 39/247 (15%)
Query: 17 VISACASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++ AC ++ GR++H + + + +D ++ T ++ MY CG + VF +L+
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-R 169
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N+ WN +++ N ELFE +S FS+L
Sbjct: 170 KNLFQWNAIVSAYTRN-------ELFE---------------DAMSIFSEL--------- 198
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+ T P + V+ ACA L L LG+ HG + DL D + ALI+MY K
Sbjct: 199 ---ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 255
Query: 196 CGQPSWA-RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
CG A +R FD + K + WNA++ GY +N + A++++ M + P+ +
Sbjct: 256 CGLVEEAVKRVFDLMDTKT--VSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 313
Query: 255 VAVLSAC 261
++L AC
Sbjct: 314 GSLLLAC 320
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 11/215 (5%)
Query: 154 VLSACADLSALKLGKETHGHV-IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+L AC +++G+ H V D + T +I+MY CG PS +R FD+ K
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WNA++S Y RN +E A+ IF +L+ + KP++ + V+ AC AG +D L
Sbjct: 171 --NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGL 226
Query: 272 -QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGACW 329
QI M L ++ + G+ G ++EA + + +L + TVS +++LL C
Sbjct: 227 GQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL--CG 284
Query: 330 CHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYA 363
NSD + + + LQ + +P F I S + A
Sbjct: 285 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 319
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 222/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EP +TFI+++S C G +HG K+ ++ M+GTA++ MY K G +
Sbjct: 43 EPTHITFIALLSGCGDFPSGSETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKK 102
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +N +TWNTMI G M +G+ A++LF+ + +PD +W +M++GF
Sbjct: 103 ARLVFDYMD-DKNSVTWNTMIDGYMRSGQVHNAVKLFDKMP----EPDLISWTAMVNGFV 157
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL LG H +V+ D +
Sbjct: 158 KKGFHEEALVWFREMQISGVKPDYVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVR 217
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 218 VSNSLIDLYCRCGCVEFAREVFDKMEKRT--VVSWNSVIVGFAANGNAHESLVYFRKMQE 275
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KPN+ +F L+AC H G VD+ L+ F M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 276 EGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAGRLE 335
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A ++++ +P +P V SLL AC H N+ + E MK L ++ ++ + +VILSN+Y
Sbjct: 336 DALKVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMY 395
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +WE R+R+ + L K PG S+
Sbjct: 396 AADAKWEGASRMRRKMKGLGLKKQPGFSS 424
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 219/384 (57%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T S++ AC+ + L +G ++HG L+ D IG +L+ +Y+ CG P A
Sbjct: 405 DPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCG-KPFAAQ 463
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V LF+G+ H +WN MI+G+SQ G
Sbjct: 464 V-------------------------------LFDGMEHRSL----VSWNVMIAGYSQNG 488
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF +M S G+ P + V AC+ LSAL+LGKE H ++A L +D +++
Sbjct: 489 LPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSS 548
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I MY K G ++R FD+ ++ D A WN +I+GYG +G + A+E+F+ M + +
Sbjct: 549 SIIDMYAKGGCIGLSQRIFDR--LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGL 606
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F +L AC HAG V+ L+ F M + ++PK EH+ C+VD+LGR+GR+D+A
Sbjct: 607 KPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDAL 666
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI E+P +P ++ SLL +C H N LGE++A KL E+EPE P +V++SN++AG G
Sbjct: 667 RLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSG 726
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+DV R+R + D L K G S
Sbjct: 727 KWDDVRRVRGRMKDIGLQKDAGCS 750
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 161/361 (44%), Gaps = 46/361 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T VI ACA LL L G+ +HG+ K++ SD +G AL+ MY KCG + A
Sbjct: 98 KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVK 157
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + RN+++ WNS+I GFS+ G
Sbjct: 158 VFEHMP-ERNLVS-----------------------------------WNSIICGFSENG 181
Query: 128 MRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E+F F +M VP + + +VL CA ++ G HG ++ LN++ +
Sbjct: 182 FLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+LI MY KC S A+ FD+ + K + WN+MI GY R + + MQ E
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKK--NIVSWNSMIGGYAREEDVCRTFYLLQKMQTE 299
Query: 246 --KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
K+K + + + VL C + ++L+ GL+ + + R G L
Sbjct: 300 DAKMKADEFTILNVLPVCLERSEL-QSLKELHGYSWRHGLQSNELVANAFIAAYTRCGAL 358
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIY 362
+ + + TVS +++LL C NSD + + + LQ + +P F I S +
Sbjct: 359 CSSERVFDLMDTKTVSSWNALL--CGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLL 416
Query: 363 A 363
A
Sbjct: 417 A 417
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 149/329 (45%), Gaps = 49/329 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + T ++V+ C LQ +++HG + + QS+ ++ A + Y +CG L +
Sbjct: 304 KADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSER 363
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L ++ + ++WN+++ G++Q
Sbjct: 364 VF-DLMDTKTV-----------------------------------SSWNALLCGYAQNS 387
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A L+ +M +G+ P + S+L AC+ + +L G+E HG +R L D +
Sbjct: 388 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 447
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+S+Y+ CG+P A+ FD E + WN MI+GY +NG + A+ +F M + +
Sbjct: 448 SLLSLYICCGKPFAAQVLFDGMEHRS--LVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 505
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGR 302
+P + + V AC A + K L F + + +D + ++D+ + G
Sbjct: 506 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSS------IIDMYAKGGC 559
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCH 331
+ ++ + L E V+ ++ ++ H
Sbjct: 560 IGLSQRIFDRLREKDVASWNVIIAGYGIH 588
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 116/255 (45%), Gaps = 40/255 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+ CA ++ G VHGL +K+ + M+ +L+DMY KC L A +
Sbjct: 202 PDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLL 261
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +NI++W NSMI G+++
Sbjct: 262 FDK-NDKKNIVSW-----------------------------------NSMIGGYAREED 285
Query: 129 RFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
F L +KMQ+ M + +VL C + S L+ KE HG+ R L +E +A
Sbjct: 286 VCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVA 345
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A I+ Y +CG + R FD + K + WNA++ GY +N + A++++ M
Sbjct: 346 NAFIAAYTRCGALCSSERVFDLMDTKT--VSSWNALLCGYAQNSDPRKALDLYLQMTDSG 403
Query: 247 VKPNSASFVAVLSAC 261
+ P+ + ++L AC
Sbjct: 404 LDPDWFTIGSLLLAC 418
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 127/250 (50%), Gaps = 16/250 (6%)
Query: 2 KECLSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
++ LSD +P + + V AC+ L L+ G+++H LK D + ++++DMY K
Sbjct: 498 RQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKG 557
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
GC+ + +F L+ +++ +WN +IAG ++GR ++A+ELFE + G KPD T+ +
Sbjct: 558 GCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 616
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADL-SALKLGKETHGHV 174
+ S G+ + + F +M + + P L+ CV +L + AL+L +E G
Sbjct: 617 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPG-- 674
Query: 175 IRADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYE 233
+ D + ++L+S G + ++ E++P+ P + + + + +G+++
Sbjct: 675 -----DPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWD 729
Query: 234 SAVEIFDLMQ 243
+ M+
Sbjct: 730 DVRRVRGRMK 739
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 138/314 (43%), Gaps = 41/314 (13%)
Query: 17 VISACASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++ AC ++ GR++H + + + +D ++ T ++ MY CG + VF +L+
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLR-R 62
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N+ WN +++ N ELFE +S FS+L
Sbjct: 63 KNLFQWNAIVSAYTRN-------ELFE---------------DAMSIFSEL--------- 91
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+ T P + V+ ACA L L LG+ HG + DL D + ALI+MY K
Sbjct: 92 ---ISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 148
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD--LMQQEKVKPNSAS 253
CG A + F+ + + WN++I G+ NG + + F L+ +E P+ A+
Sbjct: 149 CGLVEEAVKVFEH--MPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVAT 206
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V VL C ++K + + + GL + ++D+ + L EA+ L +
Sbjct: 207 LVTVLPVCAGEEDIEKGMAVHGLA-VKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKN 265
Query: 314 PEPTVSVYHSLLGA 327
+ + ++S++G
Sbjct: 266 DKKNIVSWNSMIGG 279
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +V+S A L+ R+V + + + A+V Y++ + A +F +
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+ +WNTM+ G G E+A +F+ + + D +W +M++ +SQ G E
Sbjct: 313 P-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEET 367
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M G + VLS CAD++AL+ G + HG +IRA + AL++M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG AR F++ E + D WN MI+GY R+G + A+EIFD+M+ KP+
Sbjct: 428 YFKCGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V VL+AC H+G V+K + F M DFG+ K EH+ CM+DLLGR+GRL EA +L+++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP +++ +LLGA H N +LG A K+ E+EPEN +V+LSNIYA G+W D
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R M+ +R + K+PG S
Sbjct: 606 RKMRVMMEERGVKKVPGFS 624
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F V+S CA + L+ G Q+HG ++ +G AL+ MY KCG + A N F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ R++++WNTMIAG +G ++A+E+F+ + KPD T +++ S G+
Sbjct: 442 EEME-ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 130 FEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ F M T C+ +L L+ E H + D +M
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA------EAHDLMKDMPFEPDSTM 554
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ P R ++ FE++P++ + + + Y +G++ A ++ +M++
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 245 EKVK 248
VK
Sbjct: 615 RGVK 618
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 59/285 (20%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D++ ++ + G + A + F +L ++ ++WN M+A + NGR E+A LF
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR 188
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ D +WN+++SG+ Q G EA +LF++M
Sbjct: 189 T----EWDVISWNALMSGYVQWGKMSEARELFDRMP------------------------ 220
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+D ++S Y + G ARR FD ++ D W A++S
Sbjct: 221 ---------------GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR--DVFTWTAVVS 263
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY +NG E A +FD M + N+ S+ A+++A +D+A ++F MM
Sbjct: 264 GYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 285 PKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
P + + M+ ++G L+EA+ + +P+ + ++L A
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 51/302 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+ +++ G + A +F + R+ T+N M+AG NGR A LF + +PD
Sbjct: 45 ITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPD 99
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS--VLSACADLSALKLGKE- 169
++N+++ + +A LF++M P VT ++S+ A+ + L +
Sbjct: 100 NYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 170 --------------------THGHV--IRADLNK----DESMATALISMYMKCGQPSWAR 203
+G V R N D AL+S Y++ G+ S AR
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD+ + D WN M+SGY R G+ A +FD V ++ AV+S
Sbjct: 214 ELFDRMPGR--DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQ 267
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
G +++A ++F M + + + MV + +DEA+EL +P V+ +++
Sbjct: 268 NGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNT 322
Query: 324 LL 325
+L
Sbjct: 323 ML 324
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 208/398 (52%), Gaps = 53/398 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI----------EKQSDTMIGTALVDMYLK 58
PN VT ISV+SACASL G ++H +LK + D M+ AL+DMY K
Sbjct: 399 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458
Query: 59 CGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
C A ++F ++ RN++TW
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTV---------------------------------- 484
Query: 118 SMISGFSQLGMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
MI G +Q G +A KLF +M S G+ P+ ++ +L ACA L+A+++GK+ H +V+
Sbjct: 485 -MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 543
Query: 176 RADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
R + + +A LI MY KCG AR FD K W +M++GYG +G
Sbjct: 544 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK--SAISWTSMMTGYGMHGRGS 601
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A++IFD M++ P+ +F+ VL AC H G VD+ L F M D+GL P+ EH+ C
Sbjct: 602 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 661
Query: 294 VDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+DLL RSGRLD+A ++++P EPT V+ +LL AC H N +L E KL EM EN
Sbjct: 662 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 721
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++SNIYA GRW+DV RIR ++ + K PG S
Sbjct: 722 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 759
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 22/371 (5%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ AC SL + ++VHG ++ D +G AL+D Y KCG + A
Sbjct: 260 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 319
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN M+AG +G E A ELF+ + E D TW ++I+G+SQ
Sbjct: 320 VKVFNMME-FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 378
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA LF +M +G +P+ + SVLSACA L A G E H + ++ L
Sbjct: 379 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 438
Query: 180 ----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++D + ALI MY KC AR FD ++ + W MI G+ + G+ A
Sbjct: 439 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 498
Query: 236 VEIFDLMQQEK--VKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHF- 290
+++F M E V PN+ + +L AC H A + K + + + + +F
Sbjct: 499 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSAYFV 555
Query: 291 -GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--M 347
C++D+ + G +D AR + + + + + S++ H ++ K+++
Sbjct: 556 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 615
Query: 348 EPENPTPFVIL 358
P++ T V+L
Sbjct: 616 VPDDITFLVVL 626
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T V+ AC L + G HGL +S+ I ALV MY +CG L A
Sbjct: 152 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 211
Query: 68 VFQEL--KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F E+ +G ++++WN++++ + + + A++LF +
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT-------------------- 251
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
L + T + + ++L AC L A+ KE HG+ IR D +
Sbjct: 252 ---------LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 302
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI Y KCG A + F+ E K D WNAM++GY ++G +E+A E+F M++E
Sbjct: 303 GNALIDAYAKCGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 360
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ + ++ AV++ G +AL +F M
Sbjct: 361 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 392
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 22/308 (7%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-NSMISGFSQLGMRFEAFKLFEKMQST 142
++A + G ++ A+ + E + P PA W N +I + G A + +M
Sbjct: 95 VVASYLACGATDYALLVLERVT-----PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P + VL AC +L + + G HG + + + AL++MY +CG A
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209
Query: 203 RRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD---LMQQEKV---KPNSASFV 255
FD+ + DD WN+++S + ++ +A+++F L+ EK + + S V
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+L ACG V + ++ + G P ++D + G ++ A ++ +
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGR----WED 370
V +++++ N + E+ + M EN P V + + AG + E
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFEL---FKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 371 VGRIRQMI 378
+ RQMI
Sbjct: 386 LNLFRQMI 393
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 223/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++SAC + G +HG K+ ++S M+GTA++ MY K G L
Sbjct: 53 EPNHITFIALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRK 112
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M NG+ + A+++F+ + D +W +MI+GF
Sbjct: 113 ARLVFDYIE-DKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDR----DLISWTAMITGFV 167
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + S ++AC +L AL G H +V+ D +
Sbjct: 168 KKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVR 227
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 228 VSNSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGNANESLVYFRKMQR 285
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E P+ +F L+AC H G V++ Q F MM D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 286 EGFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRIEHYGCLVDLYSRAGRLE 345
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A ++ +P +P V SLL AC H N + E MK + +++ ++ + +VILSN+Y
Sbjct: 346 DAFIVVESMPMKPNEVVIGSLLAACRNHGNHTILAERLMKYITDLDVKSHSNYVILSNMY 405
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 406 AADGKWEGASKMRRKMKGLGLKKQPGYSS 434
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 130/315 (41%), Gaps = 77/315 (24%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S I++W + I + +GR +A+ F + G +P+ T+
Sbjct: 18 SETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITF------------------ 59
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADL--SALKLGKETHGHVIRADLNKDESM-ATALIS 191
++LSAC + + LG HG+ + L + M TA++
Sbjct: 60 -----------------IALLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILG 102
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL---------- 241
MY K G AR FD E K + WN MI GY RNG+ ++AV++FD
Sbjct: 103 MYSKSGHLRKARLVFDYIEDK--NSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWT 160
Query: 242 ---------------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDD 279
MQ V P+ + ++ ++AC + G + L + ++
Sbjct: 161 AMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQ 220
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
DF + + ++DL R G ++ AR++ ++ + TV ++S++ + N++ E
Sbjct: 221 DFRNNVRVSN--SLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGNAN---E 275
Query: 340 MAMKLQEMEPENPTP 354
+ ++M+ E TP
Sbjct: 276 SLVYFRKMQREGFTP 290
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 223/385 (57%), Gaps = 6/385 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + ++++SAC L + G Q+HG+ +K I T ++ Y CG + A F
Sbjct: 532 NEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQF 591
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ ++ +WN +++G + N ++A ++F+ + D +W++MISG++Q
Sbjct: 592 -EVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPER----DVFSWSTMISGYAQTDQS 646
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A +LF KM ++G+ P+ + SV SA A L LK G+ H ++ + ++++ AL
Sbjct: 647 RIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAAL 706
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + A +FF+Q K + WNA+I G +G +++F MQ+ +KP
Sbjct: 707 IDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKP 766
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F+ VLSAC HAG V+ +IF +M + ++P +H+GCMVDLLGR+G L+EA E+
Sbjct: 767 NPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEM 826
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
IR +P + + ++ +LL AC H + ++GE A L + P + V+LSNIYA GRW
Sbjct: 827 IRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRW 886
Query: 369 EDVGRIRQMINDRQLTKLPGISAGI 393
EDV +R+ I ++++ ++PG S I
Sbjct: 887 EDVSLVRRAIQNQRMERMPGCSGVI 911
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 169/387 (43%), Gaps = 40/387 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T ++VI AC+ + R +H + +K+ + ++ T L+ Y C + A +
Sbjct: 399 PNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRL 458
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + N+++WN M+ G G + A ELFE + + D +W +MI G+ +
Sbjct: 459 FDRMP-EVNLVSWNVMLNGYAKAGLVDMARELFERVPDK----DVISWGTMIDGYILMNR 513
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++ M +G+ + V +++SAC L+A+ G + HG V++ + + T
Sbjct: 514 LHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTT 573
Query: 189 LISMYMKCGQ----------------PSW--------ARRFFDQ----FEIKPDDPAF-W 219
+I Y CG SW R DQ F+ P+ F W
Sbjct: 574 IIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSW 633
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ MISGY + + A+E+F M +KPN + V+V SA G + + + +
Sbjct: 634 STMISGYAQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICN 693
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+ + ++D+ + G ++ A + ++ + T SV S A C L S
Sbjct: 694 E-SIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDKTFSV--SPWNAIICGLASHGHAS 750
Query: 340 MAMKL-QEMEPEN--PTPFVILSNIYA 363
M + + +M+ N P P + + A
Sbjct: 751 MCLDVFSDMQRYNIKPNPITFIGVLSA 777
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 119/237 (50%), Gaps = 12/237 (5%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+ +S + C+S GRQ+H L LK+ S+T I +L++MY K G + A +F
Sbjct: 273 LALVSALKYCSSS---SQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDA 329
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ N ++ N M+ G G+ + A +LF+ + +G ++ +MI G Q E
Sbjct: 330 CP-TLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGC----VSYTTMIMGLVQNECFRE 384
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A ++F+ M+S G+VP+ + +V+ AC+ + + H I+ + ++T L+
Sbjct: 385 ALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMR 444
Query: 192 MYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
Y C ARR FD+ P+ + WN M++GY + G + A E+F+ + + V
Sbjct: 445 AYCLCSGVGEARRLFDRM---PEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDV 498
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV SA A+L L+ GR H + + AL+DMY KCG + A
Sbjct: 662 KPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQ 721
Query: 68 VFQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F +++ + ++ WN +I G+ +G + +++F + KP+P T+ ++S
Sbjct: 722 FFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHA 781
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLK 149
G+ ++F M+S V P +K
Sbjct: 782 GLVEPGRRIFRIMKSAYNVEPDIK 805
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 108/283 (38%), Gaps = 61/283 (21%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+C +++SA S+ G++ H V++ L+ + + +LI+MY K G A+ FD
Sbjct: 270 ECELALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDA 329
Query: 209 ----------------------------FEIKPDDPAF-WNAMISGYGRNGEYESAVEIF 239
F+I PD + MI G +N + A+E+F
Sbjct: 330 CPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVF 389
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF------------------ 281
M+ + V PN + V V+ AC H G + I + F
Sbjct: 390 KDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLC 449
Query: 282 -GLKPKQEHF-----------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
G+ + F M++ ++G +D AREL +P+ V + +++
Sbjct: 450 SGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYI 509
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVG 372
L + L E + M + +++ N+ + GR +G
Sbjct: 510 --LMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAIG 550
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 218/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF SV+ ACA L + G++VH K +S+ + +LVD+Y K GC A
Sbjct: 124 NPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQK 183
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ R++++WNT+I+G +G +KA +F+G+ + +W++MISG+++
Sbjct: 184 LFDEMV-VRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL----VSWSTMISGYARNE 238
Query: 128 MRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A +LF +MQ G + P+ + SVLSACA L AL LGK H + R + +
Sbjct: 239 KYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLG 298
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL MY KCG A+ F E+ D W+ +I G G A F M ++
Sbjct: 299 NALADMYAKCGCVLEAKGVFH--EMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 356
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++PN SF+ +L+AC HAG VDK L+ F MM +G+ PK EH+GC+VDLL R+GRLD+A
Sbjct: 357 LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA 416
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
LI +P +P V V+ +LLG C + +++ GE + ++ E++ + V L+N+YA +
Sbjct: 417 ESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLANVYASM 476
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR +D R + D + K PG S
Sbjct: 477 GRLDDAASCRLRMRDNKSMKTPGCS 501
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +V+S A L+ R+V + + + A+V Y++ + A +F +
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+ +WNTM+ G G E+A +F+ + + D +W +M++ +SQ G E
Sbjct: 313 P-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEET 367
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M G + VLS CAD++AL+ G + HG +IRA + AL++M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG AR F++ E + D WN MI+GY R+G + A+EIFD+M+ KP+
Sbjct: 428 YFKCGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V VL+AC H+G V+K + F M DFG+ K EH+ CM+DLLGR+GRL EA +L+++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP +++ +LLGA H N +LG A K+ E+EPEN +V+LSNIYA G+W D
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R M+ +R + K+PG S
Sbjct: 606 RKMRVMMEERGVKKVPGFS 624
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F V+S CA + L+ G Q+HG ++ +G AL+ MY KCG + A N F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ R++++WNTMIAG +G ++A+E+F+ + KPD T +++ S G+
Sbjct: 442 EEME-ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 130 FEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ F M T C+ +L L+ E H + D +M
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA------EAHDLMKDMPFEPDSTM 554
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ P R ++ FE++P++ + + + Y +G++ A ++ +M++
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 245 EKVK 248
VK
Sbjct: 615 RGVK 618
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 59/285 (20%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D++ ++ + G + A + F +L ++ ++WN M+A + NGR E+A LF
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR 188
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ D +WN+++SG+ Q G EA +LF++M
Sbjct: 189 T----EWDAISWNALMSGYVQWGKMSEARELFDRMP------------------------ 220
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+D ++S Y + G ARR FD ++ D W A++S
Sbjct: 221 ---------------GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR--DVFTWTAVVS 263
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY +NG E A +FD M + N+ S+ A+++A +D+A ++F MM
Sbjct: 264 GYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 285 PKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
P + + M+ ++G L+EA+ + +P+ + ++L A
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 51/302 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+ +++ G + A +F + R+ T+N M+AG NGR A LF + +PD
Sbjct: 45 ITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPD 99
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS--VLSACADLSALKLGKE- 169
++N+++ + +A LF++M P VT ++S+ A+ + L +
Sbjct: 100 NYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 170 --------------------THGHV--IRADLNK----DESMATALISMYMKCGQPSWAR 203
+G V R N D AL+S Y++ G+ S AR
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMSEAR 213
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD+ + D WN M+SGY R G+ A +FD V ++ AV+S
Sbjct: 214 ELFDRMPGR--DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQ 267
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
G +++A ++F M + + + MV + +DEA+EL +P V+ +++
Sbjct: 268 NGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNT 322
Query: 324 LL 325
+L
Sbjct: 323 ML 324
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +V+S A L+ R+V + + + A+V Y++ + A +F +
Sbjct: 257 TWTAVVSGYAQNGMLEEARRV----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+ +WNTM+ G G E+A +F+ + + D +W +M++ +SQ G E
Sbjct: 313 P-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEET 367
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M G + VLS CAD++AL+ G + HG +IRA + AL++M
Sbjct: 368 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 427
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG AR F++ E + D WN MI+GY R+G + A+EIFD+M+ KP+
Sbjct: 428 YFKCGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 485
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V VL+AC H+G V+K + F M DFG+ K EH+ CM+DLLGR+GRL EA +L+++
Sbjct: 486 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 545
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP +++ +LLGA H N +LG A K+ E+EPEN +V+LSNIYA G+W D
Sbjct: 546 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 605
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R M+ +R + K+PG S
Sbjct: 606 RKMRVMMEERGVKKVPGFS 624
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F V+S CA + L+ G Q+HG ++ +G AL+ MY KCG + A N F
Sbjct: 382 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 441
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ R++++WNTMIAG +G ++A+E+F+ + KPD T +++ S G+
Sbjct: 442 EEME-ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500
Query: 130 FEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ F M T C+ +L L+ E H + D +M
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA------EAHDLMKDMPFEPDSTM 554
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ P R ++ FE++P++ + + + Y +G++ A ++ +M++
Sbjct: 555 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 614
Query: 245 EKVK 248
VK
Sbjct: 615 RGVK 618
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 59/285 (20%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D++ ++ + G + A + F +L ++ ++WN M+A + NGR E+A LF
Sbjct: 130 DSVTYNVMISSHANHGLVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR 188
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ D +WN+++SG+ Q G EA +LF++M
Sbjct: 189 T----EWDVISWNALMSGYVQWGKMSEARELFDRMP------------------------ 220
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+D ++S Y + G ARR FD ++ D W A++S
Sbjct: 221 ---------------GRDVVSWNIMVSGYARRGDMVEARRLFDAAPVR--DVFTWTAVVS 263
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY +NG E A +FD M + N+ S+ A+++A +D+A ++F MM
Sbjct: 264 GYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM------- 312
Query: 285 PKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
P + + M+ ++G L+EA+ + +P+ + ++L A
Sbjct: 313 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 357
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 130/302 (43%), Gaps = 51/302 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+ +++ G + A +F + R+ T+N M+AG NGR A LF + +PD
Sbjct: 45 ITAHMRAGRVADAERLFAAMP-RRSTSTYNAMLAGYSANGRLPLAASLFRAIP----RPD 99
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS--VLSACADLSALKLGKE- 169
++N+++ + +A LF++M P VT ++S+ A+ + L +
Sbjct: 100 NYSYNTLLHALAVSSSLADARGLFDEM------PVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 170 --------------------THGHV--IRADLNK----DESMATALISMYMKCGQPSWAR 203
+G V R N D AL+S Y++ G+ S AR
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEAR 213
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD+ + D WN M+SGY R G+ A +FD V ++ AV+S
Sbjct: 214 ELFDRMPGR--DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDV----FTWTAVVSGYAQ 267
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
G +++A ++F M + + + MV + +DEA+EL +P V+ +++
Sbjct: 268 NGMLEEARRVFDAMPERNAVS-----WNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNT 322
Query: 324 LL 325
+L
Sbjct: 323 ML 324
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 224/387 (57%), Gaps = 9/387 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ ACA L G+++H LK+ SD + L++MY CG + A +
Sbjct: 127 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 186
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E + ++WN+++AG + G + ME ++ L +E + D +W+++ISG+ Q GM
Sbjct: 187 FDE-SPVLDSVSWNSILAGYVKKGDMGQVMEAWK-LFNEMDEKDMVSWSALISGYEQNGM 244
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F +M + GM V SVLSACA LS +K GK HG VIR + ++ A
Sbjct: 245 YEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNA 304
Query: 189 LI----SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
LI MYMKCG A F+ E K + WNA+I G NG E ++++F M+
Sbjct: 305 LIHMYSDMYMKCGCVENALEVFNGMEEK--GVSSWNALIIGLAVNGLVERSLDMFSEMKN 362
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V PN +F+ VL AC H G VD+ F M + G++P +H+GCMVDLLGR+G L+
Sbjct: 363 NGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN 422
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA +LI +P P V+ + +LLGAC H ++++GE + KL E++P++ V+LSNI+A
Sbjct: 423 EAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFA 482
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G WEDV +R M+ + + K PG S
Sbjct: 483 SKGDWEDVLEVRGMMKQQGVVKTPGCS 509
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 114/295 (38%), Gaps = 75/295 (25%)
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ S N WNTM+ + + +EKA+ L++ + PD T+
Sbjct: 85 IFDRIENS-NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTY----------- 132
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+ ACA GKE H HV++ + D +
Sbjct: 133 ------------------------PLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQN 168
Query: 188 ALISMYMKCGQPSWARRFFDQF--------------------------------EIKPDD 215
LI+MY CG AR+ FD+ E+ D
Sbjct: 169 TLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKD 228
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKA 270
W+A+ISGY +NG YE A+ +F M ++ + V+VLSAC H G +
Sbjct: 229 MVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHG 288
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
L I ++ L+ H D+ + G ++ A E+ + E VS +++L+
Sbjct: 289 LVIRMGIESYVNLQNALIHM--YSDMYMKCGCVENALEVFNGMEEKGVSSWNALI 341
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/398 (36%), Positives = 208/398 (52%), Gaps = 53/398 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI----------EKQSDTMIGTALVDMYLK 58
PN VT ISV+SACASL G ++H +LK + D M+ AL+DMY K
Sbjct: 406 PNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465
Query: 59 CGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
C A ++F ++ RN++TW
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTV---------------------------------- 491
Query: 118 SMISGFSQLGMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
MI G +Q G +A KLF +M S G+ P+ ++ +L ACA L+A+++GK+ H +V+
Sbjct: 492 -MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 550
Query: 176 RADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
R + + +A LI MY KCG AR FD K W +M++GYG +G
Sbjct: 551 RHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK--SAISWTSMMTGYGMHGRGS 608
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A++IFD M++ P+ +F+ VL AC H G VD+ L F M D+GL P+ EH+ C
Sbjct: 609 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACA 668
Query: 294 VDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+DLL RSGRLD+A ++++P EPT V+ +LL AC H N +L E KL EM EN
Sbjct: 669 IDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 728
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++SNIYA GRW+DV RIR ++ + K PG S
Sbjct: 729 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 766
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 184/371 (49%), Gaps = 22/371 (5%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ AC SL + ++VHG ++ D +G AL+D Y KCG + A
Sbjct: 267 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENA 326
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN M+AG +G E A ELF+ + E D TW ++I+G+SQ
Sbjct: 327 VKVFNMME-FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQ 385
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA LF +M +G +P+ + SVLSACA L A G E H + ++ L
Sbjct: 386 RGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDND 445
Query: 180 ----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++D + ALI MY KC AR FD ++ + W MI G+ + G+ A
Sbjct: 446 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 505
Query: 236 VEIFDLMQQEK--VKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHF- 290
+++F M E V PN+ + +L AC H A + K + + + + +F
Sbjct: 506 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRY---ESSAYFV 562
Query: 291 -GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--M 347
C++D+ + G +D AR + + + + + S++ H ++ K+++
Sbjct: 563 ANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 622
Query: 348 EPENPTPFVIL 358
P++ T V+L
Sbjct: 623 VPDDITFLVVL 633
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 33/272 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T V+ AC L + G HGL +S+ I ALV MY +CG L A
Sbjct: 159 RPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 218
Query: 68 VFQEL--KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F E+ +G ++++WN++++ + + + A++LF +
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT-------------------- 258
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
L + T + + ++L AC L A+ KE HG+ IR D +
Sbjct: 259 ---------LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFV 309
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI Y KCG A + F+ E K D WNAM++GY ++G +E+A E+F M++E
Sbjct: 310 GNALIDAYAKCGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 367
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ + ++ AV++ G +AL +F M
Sbjct: 368 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 22/308 (7%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-NSMISGFSQLGMRFEAFKLFEKMQST 142
++A + G ++ A+ + E + P PA W N +I + G A + +M
Sbjct: 102 VVASYLACGATDYALLVLERVT-----PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P + VL AC +L + + G HG + + + AL++MY +CG A
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216
Query: 203 RRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD---LMQQEKV---KPNSASFV 255
FD+ + DD WN+++S + ++ +A+++F L+ EK + + S V
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+L ACG V + ++ + G P ++D + G ++ A ++ +
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRN-GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGR----WED 370
V +++++ N + E+ + M EN P V + + AG + E
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFEL---FKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 371 VGRIRQMI 378
+ RQMI
Sbjct: 393 LNLFRQMI 400
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 219/379 (57%), Gaps = 12/379 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +V+S A L+ R+V + + + A+V Y++ + A +F +
Sbjct: 132 TWTAVVSGYAQNGMLEEARRV----FDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMM 187
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+ +WNTM+ G G E+A +F+ + + D +W +M++ +SQ G E
Sbjct: 188 P-CRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQK----DAVSWAAMLAAYSQGGCSEET 242
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M G + VLS CAD++AL+ G + HG +IRA + AL++M
Sbjct: 243 LQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAM 302
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG AR F++ E + D WN MI+GY R+G + A+EIFD+M+ KP+
Sbjct: 303 YFKCGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDI 360
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V VL+AC H+G V+K + F M DFG+ K EH+ CM+DLLGR+GRL EA +L+++
Sbjct: 361 TLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP +++ +LLGA H N +LG A K+ E+EPEN +V+LSNIYA G+W D
Sbjct: 421 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDA 480
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R M+ +R + K+PG S
Sbjct: 481 RKMRVMMEERGVKKVPGFS 499
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F V+S CA + L+ G Q+HG ++ +G AL+ MY KCG + A N F
Sbjct: 257 NRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAF 316
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ R++++WNTMIAG +G ++A+E+F+ + KPD T +++ S G+
Sbjct: 317 EEME-ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 375
Query: 130 FEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ F M T C+ +L L+ E H + D +M
Sbjct: 376 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA------EAHDLMKDMPFEPDSTM 429
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ P R ++ FE++P++ + + + Y +G++ A ++ +M++
Sbjct: 430 WGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEE 489
Query: 245 EKVK 248
VK
Sbjct: 490 RGVK 493
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 59/285 (20%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D++ ++ + G + A + F +L ++ ++WN M+A + NGR E+A LF
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYF-DLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSR 63
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ D +WN+++SG+ Q G EA +LF++M
Sbjct: 64 T----EWDVISWNALMSGYVQWGKMSEARELFDRMPG----------------------- 96
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+D ++S Y + G ARR FD ++ D W A++S
Sbjct: 97 ----------------RDVVSWNIMVSGYARRGDMVEARRLFDAAPVR--DVFTWTAVVS 138
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY +NG E A +FD M + N+ S+ A+++A +D+A ++F MM
Sbjct: 139 GYAQNGMLEEARRVFDAMPER----NAVSWNAMVAAYIQRRMMDEAKELFNMM------- 187
Query: 285 PKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
P + + M+ ++G L+EA+ + +P+ + ++L A
Sbjct: 188 PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 232
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 218/377 (57%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C++ + + RQ+H L+LK +I +L+ MY KCG L A ++F ++
Sbjct: 400 TIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQNAESIFSSME-E 458
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R+I++W M+ G KA E F+G++ + TWN+M+ + Q G + K+
Sbjct: 459 RDIVSWTGMLTAYSQVGNIGKAREFFDGMSTR----NVITWNAMLGAYIQHGAEEDGLKM 514
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M + ++P ++ CAD+ A KLG + GH ++ L D S+ A+I+MY
Sbjct: 515 YSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYS 574
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ S AR+ FD K D WNAMI+GY ++G + A+EIFD M ++ KP+ S+
Sbjct: 575 KCGRISEARKIFDFLSRK--DLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISY 632
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS+C H+G V + F M+ D + P EHF CMVDLL R+G L EA+ LI E+P
Sbjct: 633 VAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLIEAKNLIDEMP 692
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N++L E A L +++ + +++L+ IYA G+ D +
Sbjct: 693 MKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLAKIYADAGKSVDSAQ 752
Query: 374 IRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 753 VRKLMRDKGIKKNPGYS 769
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 155/325 (47%), Gaps = 20/325 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF + +C +L + + Q+ GL K Q D + T +VDM+++CG + A
Sbjct: 160 PNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQ 219
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ + N+M+AG + + A+ELFE + D +WN M+S SQ G
Sbjct: 220 FSQIE-RPTVFCRNSMLAGYAKSYGVDHALELFESMPER----DVVSWNMMVSALSQSGR 274
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + M + G+ TS L+ACA LS+L GK+ H VIR+ D +A+A
Sbjct: 275 AREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASA 334
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ +Y KCG ARR F ++ + W +I G+ + G + ++E+F+ M+ E +
Sbjct: 335 MVELYAKCGCFKEARRVFS--SLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMT 392
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF------GCMVDLLGRSGR 302
+ + ++S C + + A Q+ + L K H ++ + + G
Sbjct: 393 VDQFALATIISGCSNRMDMCLARQLHS-------LSLKSGHTRAVVISNSLISMYAKCGN 445
Query: 303 LDEARELIRELPEPTVSVYHSLLGA 327
L A + + E + + +L A
Sbjct: 446 LQNAESIFSSMEERDIVSWTGMLTA 470
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 153/353 (43%), Gaps = 48/353 (13%)
Query: 34 HGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGR 93
HG + + S + L+ YL CG LP A + + N++T N M+ G G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCVT 152
A ELF + + D +WN+++SG+ Q G +A + F M+ +G +P+
Sbjct: 111 LSDAEELFGRMP----RRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFG 166
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+ +C L ++ + G + + D +AT ++ M+++CG +A + F Q E
Sbjct: 167 CAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIE-- 224
Query: 213 PDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
P + N+M++GY ++ + A+E+F+ M + V S+ ++SA +G +A
Sbjct: 225 --RPTVFCRNSMLAGYAKSYGVDHALELFESMPERDV----VSWNMMVSALSQSGRAREA 278
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
L + VD+ R RLD + Y S L AC
Sbjct: 279 LSV-------------------AVDMHNRGVRLDS-------------TTYTSSLTACAK 306
Query: 331 HLNSDLGEEM-AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQ 382
+ G+++ A ++ + +P + +YA G +++ R+ + DR
Sbjct: 307 LSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRN 359
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 47/276 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT++++ CA + + G Q+ G T+K+ DT + A++ MY KCG + A +
Sbjct: 526 PDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKI 585
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L +++++WN MI G +G ++A+E+F+ + +G KPD ++ +++S S G+
Sbjct: 586 FDFLS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGL 644
Query: 129 RFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ ++ V P L+ +
Sbjct: 645 VQEGKFYFDMLKRDHNVSPGLEHF-----------------------------------S 669
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLMQ 243
++ + + G A+ D+ +KP W A++S +G E +A +FDL
Sbjct: 670 CMVDLLARAGNLIEAKNLIDEMPMKP-TAEVWGALLSACKTHGNNELAELAAKHLFDL-- 726
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P+S ++ + AG + Q+ +M D
Sbjct: 727 ---DSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRD 759
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 36/233 (15%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ + L +C AL + HG ++ L + L+ Y+ CG AR
Sbjct: 29 QALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRG 88
Query: 209 FEIKPD------------------------------DPAFWNAMISGYGRNGEYESAVEI 238
+P+ D WN ++SGY ++G + A+E
Sbjct: 89 DITEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMES 148
Query: 239 FDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F M++ PN+ +F + +CG G + ALQ+ ++ FG + + +VD+
Sbjct: 149 FVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLL-TKFGFQGDPDVATGIVDMF 207
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
R G +D A + ++ PTV +S+L G + A++L E PE
Sbjct: 208 VRCGAVDFASKQFSQIERPTVFCRNSMLAG----YAKSYGVDHALELFESMPE 256
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 211/383 (55%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VT SV+ ACA L L G+++H LK +G+A++DMY KCG L A+ +
Sbjct: 273 PNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQI 332
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + + D WN++I+ SQ G
Sbjct: 333 FRRMP------------------------------------EKDAVCWNAIITNCSQNGK 356
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M G+ +++ LSACA+L AL GK H +I+ + + +A
Sbjct: 357 PQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESA 416
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG S AR FD ++ + WN++I+ YG +G E ++ +F M ++ ++
Sbjct: 417 LIDMYGKCGNLSVARCVFDM--MREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQ 474
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ +LSACGHAG VDK +Q F M +++G+ + EH+ C+VDL GR+GRL+EA E
Sbjct: 475 PDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFE 534
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P P V+ +LLGAC H N +L E + L +++PEN +V+LSN++A G+
Sbjct: 535 TIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQ 594
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W V +IR ++ R + K+PG S
Sbjct: 595 WGSVRKIRSLMKKRGVQKVPGYS 617
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 157/330 (47%), Gaps = 44/330 (13%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ C + +PNS+TF SV+S CAS +FG Q+HGL + D ++ ALV MY K G
Sbjct: 64 MRNCQT-KPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFG 122
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNS 118
L A +F NTM PD TWN
Sbjct: 123 QLSDALKLF------------NTM--------------------------PDTNVVTWNG 144
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI+GF Q G EA LF +M S G+ P S L + + ++LK GKE HG+++R
Sbjct: 145 MIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHG 204
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ D + +ALI +Y KC A + F Q D A+ISGY NG A+EI
Sbjct: 205 IALDVFLKSALIDIYFKCRDVGMACKIFKQ--STNVDIVVCTAIISGYVLNGLNNDALEI 262
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F + +EK+ PN+ + +VL AC ++ ++ + GL ++ ++D+
Sbjct: 263 FRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKH-GLDERRHVGSAIMDMYA 321
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ GRLD A ++ R +PE +++++ C
Sbjct: 322 KCGRLDLAYQIFRRMPEKDAVCWNAIITNC 351
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 8/184 (4%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
NG E A LF+ + ++ D WN M++GF + G A K+FE M++ P+
Sbjct: 20 NGCIEDARRLFDKMPNK----DCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSIT 75
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
SVLS CA + + G + HG VI + D +A AL++MY K GQ S A + F+
Sbjct: 76 FASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTM- 134
Query: 211 IKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
PD + WN MI+G+ +NG + A +F M V P+S +F + L + + + +
Sbjct: 135 --PDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQ 192
Query: 270 ALQI 273
+I
Sbjct: 193 GKEI 196
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 8/177 (4%)
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
N DE + ++LI +Y + G ARR FD+ K D WN M++G+ + GE SAV++
Sbjct: 3 FNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNK--DCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD-DFGLKPKQEHFGCMVDLL 297
F+ M+ + KPNS +F +VLS C + Q+ ++ F P + +V +
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVAN--ALVAMY 118
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G+L +A +L +P+ V ++ ++ + + +E ++ EM +P
Sbjct: 119 SKFGQLSDALKLFNTMPDTNVVTWNGMIAG---FVQNGFMDEASLLFSEMISAGVSP 172
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/387 (37%), Positives = 213/387 (55%), Gaps = 42/387 (10%)
Query: 9 PNSVTFISVISACA-SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T +SV+SACA S LQ G V S+ + L+DMY+KCG L A N
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F++++ +N+++ WN MI G++ +
Sbjct: 318 LFEKIQ-DKNVVS-----------------------------------WNVMIGGYTHMS 341
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
EA LF +M + + P+ S+L ACA+L AL LGK H +V + + ++
Sbjct: 342 CYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVAL 401
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG + A+R FD K A WNAMISG+ +G ++A+ +F M E
Sbjct: 402 WTSLIDMYAKCGDLAVAKRIFDCMNTK--SLATWNAMISGFAMHGHTDTALGLFSRMTSE 459
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
P+ +FV VL+AC HAG + + F+ M D+ + PK H+GCM+DL GR+G DE
Sbjct: 460 GFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDE 519
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A L++ + +P +++ SLLGAC H +L E +A L E+EPENP+ +V+LSNIYAG
Sbjct: 520 AETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAG 579
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRWEDV +IR +ND ++ K+PG S+
Sbjct: 580 AGRWEDVAKIRTRLNDNRMKKVPGCSS 606
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 195/388 (50%), Gaps = 18/388 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF S+ +C + G+QVH LK+ + + + T+L++MY + G L A
Sbjct: 125 EPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARL 184
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+ +++ +I G G ++A ELF+ + D +WN+MISG++Q G
Sbjct: 185 VFDK-SSMRDAVSFTALITGYASKGFLDEARELFDEIPVR----DVVSWNAMISGYAQSG 239
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL-SALKLGKETHGHVIRADLNKDESMA 186
EA FE+M+ + P++ + SVLSACA S+L+LG + L + +
Sbjct: 240 RVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLV 299
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
LI MY+KCG A F++ I+ + WN MI GY Y+ A+ +F M Q
Sbjct: 300 NGLIDMYVKCGDLEEASNLFEK--IQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSN 357
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDE 305
+ PN +F+++L AC + G +D + +D + +K + ++D+ + G L
Sbjct: 358 IDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAV 417
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTPFVILSNI-Y 362
A+ + + +++ +++++ H ++D LG M + P++ T +L+ +
Sbjct: 418 AKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKH 477
Query: 363 AGLGRWEDVGR--IRQMINDRQLT-KLP 387
AGL +GR MI D +++ KLP
Sbjct: 478 AGL---LSLGRRYFSSMIQDYKVSPKLP 502
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 177/372 (47%), Gaps = 38/372 (10%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC--GCLPCAHNVFQEL 72
++++S C +L Q +Q+H +K + + L++ G L A ++F+ +
Sbjct: 32 LTLLSNCKTL---QTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTI 88
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ +++ WN MI G+ + A+E + + G +P+ T+ S+ +++ E
Sbjct: 89 RNPNHVI-WNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEG 147
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA------ 186
++ + G+ + TS+++ A +G ++ A L D+S
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQ----------NGELVNARLVFDKSSMRDAVSF 197
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TALI+ Y G AR FD+ ++ D WNAMISGY ++G E A+ F+ M++ K
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVR--DVVSWNAMISGYAQSGRVEEAMAFFEEMRRAK 255
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMD---DDFGLKPKQEHFGCMVDLLGRSGRL 303
V PN ++ ++VLSAC +G +LQ+ + +D GL ++D+ + G L
Sbjct: 256 VTPNVSTMLSVLSACAQSG---SSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDL 312
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLN---SDLGEEMAMKLQEMEPENPTPFVIL-- 358
+EA L ++ + V ++ ++G + H++ LG M ++P + T IL
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGG-YTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPA 371
Query: 359 -SNIYA-GLGRW 368
+N+ A LG+W
Sbjct: 372 CANLGALDLGKW 383
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 16/249 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG--TALVDMYLKCGCLPCA 65
+PN VTF+S++ ACA+L L G+ VH K K + T+L+DMY KCG L A
Sbjct: 359 DPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVA 418
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS---- 121
+F + ++++ TWN MI+G ++G ++ A+ LF + EGF PD T+ +++
Sbjct: 419 KRIF-DCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKH 477
Query: 122 -GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G LG R+ + + + + + +P C+ + L E V ++
Sbjct: 478 AGLLSLGRRYFS-SMIQDYKVSPKLPHYGCMIDLFGRAG------LFDEAETLVKNMEMK 530
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D ++ +L+ + A FE++P++P+ + + + Y G +E +I
Sbjct: 531 PDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIR 590
Query: 240 DLMQQEKVK 248
+ ++K
Sbjct: 591 TRLNDNRMK 599
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/450 (33%), Positives = 237/450 (52%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T +SV+ A ++L ++ G+++HG ++ S I TALVDMY KCG L A
Sbjct: 233 KPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARL 292
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
+F + RN+++WN+MI + N ++AM +F+ + EG KP
Sbjct: 293 LFDGML-ERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 112 -------------------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV------- 145
+ + NS+IS + + A +F K+QS +V
Sbjct: 352 DLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMIL 411
Query: 146 ------------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
P SV++A A+LS K HG V+R L+K
Sbjct: 412 GFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDK 471
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+ MY KCG AR FD + WNAMI GYG +G ++A+E+F+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTTWNAMIDGYGTHGIGKAALELFEE 529
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ ++PN +F++V+SAC H+G V+ L+ F MM +++ ++P +H+G MVDLLGR+G
Sbjct: 530 MQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAG 589
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RL+EA + I ++P +P V+VY ++LGAC H N + E++A +L E+ PE+ V+L+N
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLAN 649
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IY WE VG++R + + L K PG S
Sbjct: 650 IYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F ++ C L+ G+++HGL +K D T L +MY KC + A
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARK 191
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D +WN++++G+SQ G
Sbjct: 192 VFDRMP------------------------------------ERDLVSWNTIVAGYSQNG 215
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M A ++ M + PS + SVL A + L +++GKE HG+ +RA + ++AT
Sbjct: 216 MARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIAT 275
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD + + WN+MI Y +N + A+ IF M E V
Sbjct: 276 ALVDMYAKCGSLKTARLLFDG--MLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGV 333
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP S + L AC G +++ + + + L ++ + + +D A
Sbjct: 334 KPTDVSVMGALHACADLGDLERG-RFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 308 ELIRELPEPTVSVYHSLL 325
+ +L T+ +++++
Sbjct: 393 SMFGKLQSRTIVSWNAMI 410
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 136/276 (49%), Gaps = 16/276 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G ++A +FE + K + +M+ GF+++ +A K F +M+ + P +
Sbjct: 83 GSVDEAARVFEPID----KKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNF 138
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
T +L C D + L++GKE HG ++++ + D T L +MY KC Q AR+ FD+ +
Sbjct: 139 TYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDR--M 196
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG--HAGHVDK 269
D WN +++GY +NG A+E+ +LM +E +KP+ + V+VL A + K
Sbjct: 197 PERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGK 256
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+ + M G +VD+ + G L AR L + E V ++S++ A
Sbjct: 257 EIHGYAMRA---GFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDA-- 311
Query: 330 CHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIYA 363
++ ++ +E + Q+M E PT ++ ++A
Sbjct: 312 -YVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHA 346
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 221/386 (57%), Gaps = 9/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN VT + V+SACA + L+FGR + + ++ A++DMY+KCG L A
Sbjct: 229 RPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARR 288
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +++ ++I++W TMI G G + A +F+ + E D WN++IS + Q G
Sbjct: 289 LFDKME-EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPRE----DITAWNALISSYQQNG 343
Query: 128 MRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA +F ++Q + P+ + S L+ACA L A+ LG H ++ + + + +
Sbjct: 344 KPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHIT 403
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A F + ++ D W+AMI+G +G +A+++F MQ+ K
Sbjct: 404 TSLIDMYSKCGHLEKALEVF--YSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETK 461
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN+ +F +L AC H+G VD+ F M +G+ P +H+ CMVD+LGR+G L+EA
Sbjct: 462 VKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEA 521
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI ++P P+ SV+ +LLGAC + N +L E +L E + N +V+LSNIYA
Sbjct: 522 VELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKA 581
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G+W+ V R+RQ + L K PG S+
Sbjct: 582 GKWDCVSRLRQHMKVSGLEKEPGCSS 607
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 71/372 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF VI A + L G+ +HG+ +K SD I +L+ Y G L A+ V
Sbjct: 129 PNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLV 188
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ ++I++WN+MI+G + G E+A++LF+ + E +P+ T
Sbjct: 189 FSKIV-EKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVT------------- 234
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ VLSACA L+ G+ ++ R ++ + ++ A
Sbjct: 235 ----------------------MVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNA 272
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV- 247
++ MY+KCG ARR FD+ E K D W MI GY + G+Y++A +FD+M +E +
Sbjct: 273 MLDMYVKCGSLEDARRLFDKMEEK--DIVSWTTMIDGYAKVGDYDAARRVFDVMPREDIT 330
Query: 248 -------------------------------KPNSASFVAVLSACGHAGHVDKALQIFTM 276
KPN + + L+AC G +D I
Sbjct: 331 AWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVY 390
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
+ G+K ++D+ + G L++A E+ + V V+ +++ H +
Sbjct: 391 IKKQ-GIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRA 449
Query: 337 GEEMAMKLQEME 348
++ K+QE +
Sbjct: 450 AIDLFSKMQETK 461
>gi|296083752|emb|CBI23741.3| unnamed protein product [Vitis vinifera]
Length = 545
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 230/390 (58%), Gaps = 9/390 (2%)
Query: 4 CLSDE-PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
C SD P+ T ++ + L L G+ +HG +++I SDT++ +++ MY KCG
Sbjct: 116 CSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNF 175
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
+ VF E+ RN +WN +IAG ++G +F+ + + +W +MI+G
Sbjct: 176 EESRKVFDEMT-IRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCR----NVFSWTAMING 230
Query: 123 FSQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ + G EA LF MQ G+ P+ + SVL AC+ S L G++ HG +R +LN
Sbjct: 231 YVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNN 290
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ S+ ALI MY KCG ARR F+ + D + W++MISGYG +G+ + A+ ++D
Sbjct: 291 EVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS-WSSMISGYGLHGKGQEAILLYDK 349
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M Q ++P+ + V +LSAC +G V++ L I++ + +D+G++P E F C+VD+LGR+G
Sbjct: 350 MLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAG 409
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+LD A + I+ +P EP SV+ +L+ H + ++ E L ++EPENP+ +V +SN
Sbjct: 410 QLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISN 469
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA RW+ V +R+M+ D++L K+PG S
Sbjct: 470 LYASSRRWDAVAEVRRMMKDKRLRKVPGCS 499
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+H+ L S+N L +I + + +F+ L H+ + WNS+I+G++
Sbjct: 45 SHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHK----NVFLWNSLINGYA 100
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + EAF+LF +M S+ ++P ++++ ++L AL GK HG IR D
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTV 160
Query: 185 MATALISMYMKCGQPSWARRFFDQFEI-----------------------------KPDD 215
+A +++SMY KCG +R+ FD+ I K +
Sbjct: 161 VANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNLVVGRRVFDRMKCRN 220
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHVDKALQI- 273
W AMI+GY NG+ + A+ +F MQ + ++PN S V+VL AC + QI
Sbjct: 221 VFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIH 280
Query: 274 -FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
F + + L + ++D+ + G LD AR + +
Sbjct: 281 GFAVRKE---LNNEVSLCNALIDMYSKCGSLDSARRVFED 317
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
PSL + S L +LKL +++H ++ L+++ +AT LI Y C P +R
Sbjct: 22 PSLALLQS-LHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLV 80
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
FD + K + WN++I+GY +N Y A ++F+ M V P+
Sbjct: 81 FDSLQHK--NVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPD 123
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 215/384 (55%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ +SA + + G+Q+HG +K ++D + TAL+DMY KCG
Sbjct: 154 RPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVR 213
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E ++ + N +IAG+ N + +A+ LF+ G + + +W S+++ Q G
Sbjct: 214 VFDE-SSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVACCVQNG 272
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F +MQ+ G P+ + VL A A+++AL G+ H +R D +++
Sbjct: 273 KDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSS 332
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ AR FD + + WNAMI GY GE +AV +F M + K
Sbjct: 333 ALVDMYAKCGRVKDARIIFDTMVSR--NVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQ 390
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F +L+AC AG ++ F M +++G+ P+ EH+ CMV LLGR+G+LDEA
Sbjct: 391 KPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAY 450
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI ++P EP ++ SLLG+C H N DL E A KL +EPEN +V+LSNIYA
Sbjct: 451 DLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKLFHLEPENAGNYVLLSNIYASKK 510
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ V R+R+M+ D L K G S
Sbjct: 511 MWDRVNRVREMMKDVGLKKEKGCS 534
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 46/290 (15%)
Query: 26 YLQFGRQVHGLTL--KIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGS----RNI 78
YL+ G + L + + T++G +ALV + G A + +E++ N+
Sbjct: 62 YLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNV 121
Query: 79 LTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQLGMRFEAFKLFE 137
+TWN +++G+ +GR+ A+ + EG +PD
Sbjct: 122 ITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPD------------------------- 156
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+TG V+ LSA D+ + +G++ HG+ ++A D + TALI MY KCG
Sbjct: 157 ---ATG-------VSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCG 206
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
Q + R FD E D A NA+I+G RN + A+ +F V+ N S+ ++
Sbjct: 207 QAAEVVRVFD--ESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSI 264
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
++ C G +A++ F M G +P C++ L R
Sbjct: 265 VACCVQNGKDLEAVEFFREMQAQ-GTEPNSVTIPCVLPAFANVAALMHGR 313
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L L + H + L +D +A++L+ Y++ G AR FD W+A++
Sbjct: 33 LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVGWSALV 92
Query: 224 SGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
+ + G+ E A + + M+++ V+PN ++ ++S +G A+ M +
Sbjct: 93 AAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGL 152
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEAREL 309
L+P C + +G G + ++L
Sbjct: 153 LRPDATGVSCALSAVGDVGLVSVGQQL 179
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 211/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+VT +SV+ ACA L +L G+ +HG +K+ D + AL+ +Y KCG N
Sbjct: 226 QPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCG------N 279
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V E A LF+G+ + +WN+MI+ + Q
Sbjct: 280 V--------------------------ETARSLFDGMVVQNL----VSWNAMIAAYEQNN 309
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A KLF +MQ+ + + SV+SACA L AL G+ H V R L + S+
Sbjct: 310 AGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITN 369
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR F++ + W +MI +G E A+++F M+ E V
Sbjct: 370 ALIDMYAKCGNIDLAREVFERLPCR--SVVSWTSMIGACASHGHGEDALKLFSRMKDEGV 427
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPNS +F AV +AC H+G V++ + F M D+ + P EH CMVDLLGR+G L EA
Sbjct: 428 KPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAY 487
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++P EP VSV+ +LLG+C H N +L E +A KL ++P+ T +V++SNIYA G
Sbjct: 488 EFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAG 547
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWED R+R+++ +R+L K+PG S
Sbjct: 548 RWEDAARLRKLMEERELKKIPGHS 571
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 42/346 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF V+ +CA L L+ G++VH +K SD + ++LV MY + G V
Sbjct: 126 PDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELV 185
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RNI++W ++I+G+ Q
Sbjct: 186 FGEMV-VRNIVSWT-----------------------------------AVIAGYVQNRY 209
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E +F +M +G P+ + SVL ACA L L LGK HG+ I+ ++ D S+ A
Sbjct: 210 FKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNA 269
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI++Y KCG AR FD ++ + WNAMI+ Y +N +AV++F MQ EKV
Sbjct: 270 LIALYGKCGNVETARSLFDGMVVQ--NLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVD 327
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ + V+V+SAC G ++ + ++ GL+ ++D+ + G +D ARE
Sbjct: 328 FDYITMVSVISACASLGALNTGRWMHELVKRK-GLEINVSITNALIDMYAKCGNIDLARE 386
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ LP +V + S++GAC H + GE+ M+ E P
Sbjct: 387 VFERLPCRSVVSWTSMIGACASHGH---GEDALKLFSRMKDEGVKP 429
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G +L+ +I L + A ++F+ + K D WN++I G++ G EA
Sbjct: 58 GQNLLLSTKLIITACCLAPTMDYARKMFDQMP----KRDVFLWNTLIRGYADAGPCEEAL 113
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
L+ M G+ P V+ +CA LSAL+ GKE H ++++ + D + ++L++MY
Sbjct: 114 ALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMY 173
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+ G+ F + ++ + W A+I+GY +N ++ + +F M +PN+ +
Sbjct: 174 SQSGETLGMELVFGEMVVR--NIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVT 231
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V+VL AC ++ ++ G+ P ++ L G+ G ++ AR L +
Sbjct: 232 LVSVLPACAGLEFLNLG-KLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGM 290
Query: 314 PEPTVSVYHSLLGA 327
+ +++++ A
Sbjct: 291 VVQNLVSWNAMIAA 304
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/416 (36%), Positives = 218/416 (52%), Gaps = 38/416 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V+ A + L G Q+HG LKI + +G L+ MY KC L A V
Sbjct: 118 PDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQV 177
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------- 115
E+ R++++WN+M++ NGR A+EL + KP+ T
Sbjct: 178 LDEIP-CRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTS 236
Query: 116 --------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
WN MI+ + M EA L+ +M++ G+ P + + SVL
Sbjct: 237 DNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVL 296
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A DLSAL LG+ H R L + + ALI MY KCG AR F+Q + + D
Sbjct: 297 PAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR--D 354
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
W ++IS YG+ G+ AV +F M+ + P+S +FV+VL+AC HAG +D F
Sbjct: 355 VVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFN 414
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
+M + G+ PK EHF C+VDLLGR+G++DEA IR++P EP V+ LL AC + N
Sbjct: 415 LM-AECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNM 473
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++G A KL + PE+ +V+LSNIYA GRW DV IR ++ + + KLPGIS
Sbjct: 474 NIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGIS 529
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 11/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ +SV+ A L L GR+VH + + + ++ AL+DMY KCGCL A
Sbjct: 286 EPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARA 345
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +++ R++++W ++I+ G+ A+ +F + + G PD + S+++ S G
Sbjct: 346 VFNQMQ-FRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAG 404
Query: 128 MRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + F M G+ P L+ CV +L + E +G + + L DE
Sbjct: 405 LLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKID------EAYGFIRQMPLEPDER 458
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ L+S + D+ + P+ ++ + + Y + G + I +M+
Sbjct: 459 VWGPLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIME 518
Query: 244 QEKVK 248
++ +K
Sbjct: 519 RKGIK 523
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 31 RQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
+++HG L + + + +G L+ +Y CG A ++F E+ +N++ +N MI
Sbjct: 38 KKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEIT-DKNVVFFNVMI---- 92
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
RS L++ +A +++ M + G VP +
Sbjct: 93 ---RSYVNNHLYK----------------------------DALLVYKTMYTQGFVPDMY 121
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
VL A + +L +G + HG V++ L+ + + LI+MY KC A++ D
Sbjct: 122 TYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLD-- 179
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
EI D WN+M+S Y +NG + A+E+ M+ +KPN + ++L A
Sbjct: 180 EIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA 230
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 212/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T SV+SACA+L + G+QVH L+ + AL+ MY K G + A V
Sbjct: 293 PDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGV 352
Query: 69 FQE-LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
Q+ + N++++ ++ G + G + A E+F+ +++ D W +MI G+ Q G
Sbjct: 353 MQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR----DVVAWTAMIVGYEQNG 408
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF M +G P+ V +VLS CA L+ L+ GK+ H IR+ + S++
Sbjct: 409 HNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSN 468
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++++MY + G WARR FD+ + + W +MI ++G E AV +F+ M + V
Sbjct: 469 SIVTMYARSGSLPWARRVFDRVHWRKE-TVTWTSMIVALAQHGLGEDAVGLFEEMLRVGV 527
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +FV VLSAC H G VD+ + F + D G+ P+ H+ CMVDLL R+G EA+
Sbjct: 528 KPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQ 587
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I+++P EP + SLL AC H N+DL E A KL ++P N + LSN+Y+ G
Sbjct: 588 EFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACG 647
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D +I + D+ + K G S
Sbjct: 648 RWNDAAKIWKRRKDKSVKKETGFS 671
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 187/396 (47%), Gaps = 61/396 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T +V+S+CA+ GR+VH +K+ S + ++++MY KCG A V
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGFSQL 126
F+ + R++ +WN M++ GR + A+ LFE + PD +WN++I+G++Q
Sbjct: 220 FERMP-ERSVSSWNAMVSLDAHLGRMDLALSLFENM------PDRTIVSWNAVIAGYNQN 272
Query: 127 GMRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A F +M S + M P +TSVLSACA+L + +GK+ H +++R+ + +
Sbjct: 273 GLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQV 332
Query: 186 ATALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD- 214
ALISMY K G AR Q F++ +
Sbjct: 333 TNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNR 392
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W AMI GY +NG + A+E+F LM + +PNS + AVLS C ++ QI
Sbjct: 393 DVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIH 452
Query: 275 TMMDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGAC 328
++ QE +V + RSG L AR + + + TV+ + S++ A
Sbjct: 453 CK-----AIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT-WTSMIVAL 506
Query: 329 WCHLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
H LGE+ +EM +P+ T +LS
Sbjct: 507 AQH---GLGEDAVGLFEEMLRVGVKPDRITFVGVLS 539
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 147/323 (45%), Gaps = 49/323 (15%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC-----AHNVFQELKGS-RNILTWNT 83
GR +H +K + + L+ Y A +F E+ + RN+ TWN+
Sbjct: 42 GRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAAQRNVFTWNS 101
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
+++ +GR A +F + DP +W M+ G +++G EA K+F M + G
Sbjct: 102 LLSLYAKSGRLADARAVFAEMPER----DPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDG 157
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ P+ +T+VLS+CA A +G++ H V++ L+ +A ++++MY KCG AR
Sbjct: 158 LSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETAR 217
Query: 204 RFFDQ----------------------------FEIKPDDPAF-WNAMISGYGRNGEYES 234
F++ FE PD WNA+I+GY +NG
Sbjct: 218 AVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAK 277
Query: 235 AVEIFD-LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-- 291
A+ F ++ + P+ + +VLSAC + G V Q+ + L+ + + G
Sbjct: 278 ALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYI-----LRSRMPYIGQV 332
Query: 292 --CMVDLLGRSGRLDEARELIRE 312
++ + +SG ++ AR ++++
Sbjct: 333 TNALISMYAKSGSVENARGVMQQ 355
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS T +V+S CASL L++G+Q+H ++ ++ + + ++V MY + G LP A
Sbjct: 426 EPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARR 485
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + +TW +MI + +G E A+ LFE + G KPD T+ ++S + +G
Sbjct: 486 VFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVG 545
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E + F+++Q G+VP + C+ +L+ L E + + + D
Sbjct: 546 FVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAG------LFSEAQEFIQQMPVEPDA 599
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+S A ++ I P + ++A+ + Y G + A +I+
Sbjct: 600 IAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRR 659
Query: 243 QQEKVKPNS 251
+ + VK +
Sbjct: 660 KDKSVKKET 668
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 217/377 (57%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C S + L GRQ+H L LK + ++ +L+ MY KC L A ++F+ +
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMN-E 434
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++I++W +MI G KA E F+G++ + TWN+M+ + Q G + ++
Sbjct: 435 KDIVSWTSMITAHSQVGNIAKAREFFDGMS----TKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 136 FEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M S V P ++ CADL A KLG + G ++ L D S+A A+I+MY
Sbjct: 491 YNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYS 550
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ AR+ FD +K D WNAMI+GY ++G + A+EIFD + + KP+ S+
Sbjct: 551 KCGRILEARKVFDFLNVK--DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 608
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM + P EHF CMVDLLGR+G L EA++LI E+P
Sbjct: 609 VAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMP 668
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N++L E A + E++ + +++++ IYA G+ +D +
Sbjct: 669 MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ 728
Query: 374 IRQMINDRQLTKLPGIS 390
IR+++ D+ + K PG S
Sbjct: 729 IRKLMRDKGIKKNPGYS 745
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF + +C +L Q+ G+ K Q D+ + ALVDM+++CG + A +
Sbjct: 136 PNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRL 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K I N+M+ G + + A+ELF+ + D +WN M+S SQ G
Sbjct: 196 FVRIK-EPTIFCRNSMLVGYVKTYGVDHALELFDSMPER----DVVSWNMMVSALSQSGR 250
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + MQS G+ TS L+ACA LS+L+ GK+ H VIR D +A+A
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASA 310
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y KCG A+ F+ + + W +I+G+ ++G + +VE+F+ M+ E +
Sbjct: 311 LVELYAKCGCFKEAKGVFNSLHDR--NNVAWTVLIAGFLQHGCFTESVELFNQMRAELMT 368
Query: 249 PNSASFVAVLSAC 261
+ + ++S C
Sbjct: 369 LDQFALATLISGC 381
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ S ++ACA L L++G+Q+H ++ D + +ALV++Y KCGC A VF
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKEAKGVF 328
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L N+ W +I+GF Q G
Sbjct: 329 NSLHDRNNV------------------------------------AWTVLIAGFLQHGCF 352
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E+ +LF +M++ M + +++S C L LG++ H +++ + ++ +L
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 190 ISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPAF 218
ISMY KC G + AR FFD K +
Sbjct: 413 ISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTK--NVIT 470
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAM+ Y ++G E + ++++M EK V+P+ ++V + C G QI
Sbjct: 471 WNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 530
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL ++ + + GR+ EAR++ L + +++++
Sbjct: 531 -VKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMI 577
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 143/330 (43%), Gaps = 27/330 (8%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
F + +C + L R +HG + + S + L+ YL CG LP A +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQLGMRF 130
N++T N M+ G + GR A+ELF G P D A+WN+++SG+ Q
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELF------GRMPARDVASWNTLMSGYFQSQQYL 119
Query: 131 EAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ + F M +G P+ + +C L L + G V + D +A AL
Sbjct: 120 ASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAAL 179
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ M+++CG A R F ++ +P + N+M+ GY + + A+E+FD M + V
Sbjct: 180 VDMFVRCGTVDLASRLF----VRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDV 235
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S+ ++SA +G V +AL + M G++ + + R L +
Sbjct: 236 ----VSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLTACARLSSLRWGK 290
Query: 308 EL----IRELP--EPTV-SVYHSLLGACWC 330
+L IR LP +P V S L C C
Sbjct: 291 QLHAQVIRNLPCIDPYVASALVELYAKCGC 320
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 45/276 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT++++ CA L + G Q+ G T+K+ DT + A++ MY KCG + A
Sbjct: 501 RPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARK 560
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L ++I++WN MI G +G ++A+E+F+ + G KPD ++ +++SG S G
Sbjct: 561 VFDFLN-VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSG 619
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E F+ M+ H I L M
Sbjct: 620 LVQEGKSYFDMMKRV------------------------------HNISPGLEHFSCM-- 647
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLMQ 243
+ + + G + A+ D+ +KP W A++S +G E +A +F+L
Sbjct: 648 --VDLLGRAGHLTEAKDLIDEMPMKP-TAEVWGALLSACKIHGNNELAELAAKHVFELDS 704
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P+S S++ + AG D + QI +M D
Sbjct: 705 -----PDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 735
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/384 (37%), Positives = 223/384 (58%), Gaps = 12/384 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V +SV+SACA L ++ G+ +HGL +++ +S + AL+ MY G + A +F
Sbjct: 303 DEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLF 362
Query: 70 QELKGSRNI--LTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
GS N+ ++WN+MI+G M G EKA LF+ + + D +W+++ISG++Q
Sbjct: 363 N---GSHNLDQISWNSMISGCMKCGSVEKARALFDVMP----EKDIVSWSAVISGYAQHD 415
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E LF +MQ + P + SV+SAC L+AL GK H ++ + L + + T
Sbjct: 416 CFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGT 475
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MYMKCG A F+ E K + WNA+I G NG E ++++F M+ V
Sbjct: 476 TLLDMYMKCGCVENALEVFNGMEEK--GVSSWNALIIGLAVNGLVERSLDMFSEMKNNGV 533
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+ VL AC H G VD+ F M + G++P +H+GCMVDLLGR+G L+EA
Sbjct: 534 IPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAE 593
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P P V+ + +LLGAC H ++++GE + KL E++P++ V+LSNI+A G
Sbjct: 594 KLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKG 653
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WEDV +R M+ + + K PG S
Sbjct: 654 DWEDVLEVRGMMKQQGVVKTPGCS 677
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 175/376 (46%), Gaps = 64/376 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ ACA L G+++H LK+ SD + L++MY CG + A +
Sbjct: 139 PDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKL 198
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE--------------------GLAHEG 108
F E + ++WN+++AG + G E+A +F+ G E
Sbjct: 199 FDE-SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEA 257
Query: 109 FK-------PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
+K D +W+++ISG+ Q GM EA +F +M + GM V SVLSACA L
Sbjct: 258 WKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHL 317
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMY---------------------------- 193
S +K GK HG VIR + ++ ALI MY
Sbjct: 318 SIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMI 377
Query: 194 ---MKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
MKCG AR FD + P+ D W+A+ISGY ++ + + +F MQ +++P
Sbjct: 378 SGCMKCGSVEKARALFD---VMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRP 434
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ V+V+SAC H +D+ + + + GLK ++D+ + G ++ A E+
Sbjct: 435 DETILVSVISACTHLAALDQGKWVHAYIRKN-GLKVNVILGTTLLDMYMKCGCVENALEV 493
Query: 310 IRELPEPTVSVYHSLL 325
+ E VS +++L+
Sbjct: 494 FNGMEEKGVSSWNALI 509
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%), Gaps = 12/244 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +SVISAC L L G+ VH K + + ++GT L+DMY+KCGC+ A V
Sbjct: 434 PDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEV 493
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + + +WN +I G+ +NG E+++++F + + G P+ T+ ++ +G+
Sbjct: 494 FNGME-EKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGL 552
Query: 129 RFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E F M + G+ P++K C+ +L L+ E + + D +
Sbjct: 553 VDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLN------EAEKLIESMPMAPDVA 606
Query: 185 MATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AL+ K G R + E++PD F + + + G++E +E+ +M+
Sbjct: 607 TWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMK 666
Query: 244 QEKV 247
Q+ V
Sbjct: 667 QQGV 670
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 42/212 (19%)
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ S N WNTM+ + + +EKA+ L++ + PD T+
Sbjct: 97 IFDRIENS-NGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTY----------- 144
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+ ACA GKE H HV++ + D +
Sbjct: 145 ------------------------PLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQN 180
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI+MY CG AR+ FD+ + D WN++++GY + G+ E A IFD M Q +
Sbjct: 181 TLINMYAVCGNMRDARKLFDESPVL--DSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI 238
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+++ V + G G V +A ++F MD+
Sbjct: 239 VASNSMIVLL----GKMGQVMEAWKLFNEMDE 266
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 208/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF SV+ ACA L +G +VHG +K D +G+A++DMY KCG L A
Sbjct: 470 EPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEK 529
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + L+ + +WNS+ISGFS
Sbjct: 530 IHERLEERTTV------------------------------------SWNSIISGFSSEK 553
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A F +M G++P +VL CA+L+ ++LGK+ HG +++ L+ D +A+
Sbjct: 554 QGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIAS 613
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ MY KCG +R F++ + D W+AMI Y +G E A+++F+ MQ + V
Sbjct: 614 TIVDMYSKCGNMQDSRIMFEKAPKR--DYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNV 671
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN F++VL AC H G VDK L F M +GL P+ EH+ CMVDLLGRSG+++EA
Sbjct: 672 KPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEAL 731
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P E ++ +LLG C N ++ E+ A L +++P++ + +V+LSN+YA G
Sbjct: 732 ELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAG 791
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V +IR + + +L K PG S
Sbjct: 792 MWGEVAKIRSFMKNYKLKKEPGCS 815
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 10/315 (3%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+TF + C++L + G+Q H + L+ Y KC L A NVF +
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ R++++WNTMI G G E A LF+ + + D +WNSM+S + Q G +
Sbjct: 99 MP-QRDVISWNTMIFGYAGVGNMEFAQFLFDSMP----ERDVVSWNSMLSCYLQNGFHRK 153
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ ++F KM+ + VL AC + LG + H I+ + D TAL+
Sbjct: 154 SIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVD 213
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY C + A F E+ + W+A+I+GY RN + ++++ +M E + +
Sbjct: 214 MYSTCKKLDHAFNIF--CEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQ 271
Query: 252 ASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
A+F + +C + Q+ + +FG +D+ + R+ +AR++
Sbjct: 272 ATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG--TATLDMYAKCDRMVDARKVF 329
Query: 311 RELPEPTVSVYHSLL 325
P PT +++L+
Sbjct: 330 NTFPNPTRQSHNALI 344
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 152/347 (43%), Gaps = 46/347 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ ++AC+++ G Q+HGL +K + + ++DMY KCG L A +F
Sbjct: 371 DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIF 430
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ME+ D +WN++I+ Q
Sbjct: 431 DD--------------------------MEI----------KDAVSWNAIIAAHEQNEHV 454
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF M + M P SV+ ACA AL G E HG VI++ + D + +A+
Sbjct: 455 EETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAI 514
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A + ++ E + WN++ISG+ + E+A+ F M Q V P
Sbjct: 515 IDMYCKCGMLVEAEKIHERLEERT--TVSWNSIISGFSSEKQGENALSYFSRMLQVGVIP 572
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAR 307
++ ++ VL C + V+ QI + L+ + + +VD+ + G + ++R
Sbjct: 573 DNFTYATVLDICANLATVELGKQIHGQI---LKLQLHSDVYIASTIVDMYSKCGNMQDSR 629
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + P+ + +++ A H LGE+ +EM+ +N P
Sbjct: 630 IMFEKAPKRDYVTWSAMICAYAYH---GLGEDAIKLFEEMQLQNVKP 673
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 152/354 (42%), Gaps = 47/354 (13%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L + + TF V+ AC + G QVH L +++ SD + GTALVDMY C L
Sbjct: 164 LEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDH 223
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A N+F E+ RN W+++I+G+
Sbjct: 224 AFNIFCEMP-ERN-----------------------------------SVCWSAVIAGYV 247
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ E KL++ M GM S S +CA LSA +LG + H + ++ + D
Sbjct: 248 RNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNI 307
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ TA + MY KC + AR+ F+ F P + NA+I GY R + A+EIF +Q+
Sbjct: 308 VGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSH-NALIVGYARQDQVLEALEIFRSLQK 365
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD---DFGLKPKQEHFGCMVDLLGRSG 301
+ + S L+AC + +Q+ + DF + ++D+ + G
Sbjct: 366 SYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT----ILDMYAKCG 421
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWC--HLNSDLGEEMAMKLQEMEPENPT 353
L EA + ++ +++++ A H+ L ++M MEP++ T
Sbjct: 422 ALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYT 475
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 45/316 (14%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF S +CA L + G Q+H LK D ++GTA +DMY KC + A VF
Sbjct: 273 TFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTF 332
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
P + N++I G+++ EA
Sbjct: 333 P------------------------------------NPTRQSHNALIVGYARQDQVLEA 356
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
++F +Q + + ++ L+AC+ + G + HG ++ L+ + +A ++ M
Sbjct: 357 LEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDM 416
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A FD EIK D WNA+I+ + +N E + +F M + ++P+
Sbjct: 417 YAKCGALMEACLIFDDMEIK--DAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDY 474
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAREL 309
+F +V+ AC ++ +++ ++ GL + F ++D+ + G L EA ++
Sbjct: 475 TFGSVVKACAGKKALNYGMEVHGRVIKSGMGL----DWFVGSAIIDMYCKCGMLVEAEKI 530
Query: 310 IRELPEPTVSVYHSLL 325
L E T ++S++
Sbjct: 531 HERLEERTTVSWNSII 546
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/467 (31%), Positives = 235/467 (50%), Gaps = 92/467 (19%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL---------- 62
T+ SV+ CA L +Q GR++H + + + D ++G+ LV MY+ CG L
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 63 ---------------------------------------PCAHNVFQELKGSRNILTWNT 83
A +F EL G R++++WN+
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDEL-GDRDVISWNS 221
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT---------------------------- 115
MI+G + NG SEK ++LFE + G D AT
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQV 281
Query: 116 -----------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
W SMI+G+++ G+ + +LF +M+ + P+ + +L ACA L+AL
Sbjct: 282 FETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAAL 341
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+ G+E HGH++R + D +A AL+ MY+KCG AR FD I D W MI+
Sbjct: 342 ERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDM--IPEKDLVSWTVMIA 399
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GYG +G A+ F+ M+ ++P+ SF+++L AC H+G +D+ F MM ++ ++
Sbjct: 400 GYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIE 459
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
PK EH+ C+VDLL R+G L +A + I+ +P EP +++ +LL C + + L E++A
Sbjct: 460 PKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEH 519
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ E+EPEN +V+L+NIYA +WE+V ++R+ I R L K PG S
Sbjct: 520 VFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCS 566
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS+T ++ ACASL L+ G+++HG L+ D + ALVDMYLKCG L A +
Sbjct: 323 PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLL 382
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +++++W MIAG ++G +A+ F + + G +PD ++ S++ S G+
Sbjct: 383 F-DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 129 RFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E + F M++ + C+ +L+ +LS + + + + D +
Sbjct: 442 LDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLS------KAYKFIKMMPIEPDAT 495
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ A + + FE++P++ ++ + + Y ++E ++ + +
Sbjct: 496 IWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 555
Query: 244 QEKVKPN 250
+ ++ N
Sbjct: 556 RRGLRKN 562
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 28/260 (10%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N I F +LG A +L QS L+ SVL CADL +++ G+ H +
Sbjct: 71 YNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQ 128
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D+ D + + L+ MY+ CG RR FD+ + + WN +++GY + G + +
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDK--VANEKVFLWNLLMNGYAKIGNFRES 186
Query: 236 VEIFDLMQQEKVK--------------PNSASFVAVLSACGHAGHVDKALQIFTMM---- 277
+ +F M++ ++ + S+ +++S G +K L +F M
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLG 246
Query: 278 -DDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
+ D E C++D+ +SG L+ A ++ + E +V + S++ +
Sbjct: 247 INTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAG---YARE 303
Query: 335 DLGEEMAMKLQEMEPENPTP 354
L + EME E+ P
Sbjct: 304 GLSDMSVRLFHEMEKEDLFP 323
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 212/385 (55%), Gaps = 41/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L G ++H +K D+ +G AL+DMY KCG +
Sbjct: 411 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMM----- 465
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
EKA +L + LA + +WN++ISGFS
Sbjct: 466 ---------------------------EKAEKLHDRLAEQTV----VSWNAIISGFSLQK 494
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F KM G+ P ++L CA+L ++LGK+ H +I+ +L D +++
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L+ MY KCG + F FE P+ D WNAM+ GY ++G E A++IF+ MQ E
Sbjct: 555 TLVDMYSKCGN---MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 611
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN A+F+AVL ACGH G V+K L F M ++GL P+ EH+ C+VD++GRSG++ +A
Sbjct: 612 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 671
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI +P E ++ +LL C H N ++ E+ A + ++EPE+ +V+LSNIYA
Sbjct: 672 LELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANA 731
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W +V ++R+M+ L K PG S
Sbjct: 732 GMWNEVTKLRKMMRFNGLKKEPGCS 756
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 145/345 (42%), Gaps = 42/345 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V+ ACA + G QVHGL++K QS+ + A++DMY KCG L A VF
Sbjct: 312 DEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 371
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E+ D +WN++I+ Q G
Sbjct: 372 EEM------------------------------------VSRDAVSWNAIIAAHEQNGNE 395
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ LF M +GM P SVL ACA AL G E H +I++ + D + AL
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIAL 455
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A + D+ + WNA+ISG+ + E A + F M + V P
Sbjct: 456 IDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ ++ +L C + V+ QI + L+ +VD+ + G + + + +
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDFQLI 572
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ P +++++ + LGEE + M+ EN P
Sbjct: 573 FEKAPNRDFVTWNAMVCG---YAQHGLGEEALKIFEYMQLENVKP 614
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 178/379 (46%), Gaps = 43/379 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN-- 67
+ TF V+ +C+SL G Q+HGL +K+ D + G+AL+DMY KC C N
Sbjct: 157 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC----CVQNDD 212
Query: 68 ------VFQELK------------------GSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
+F+E++ G+ ++ T+ M N S+ + +LF
Sbjct: 213 LRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNS 272
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L + + ++N++I G+++ EA +F +Q +G+ ++ ACA +
Sbjct: 273 LPNHNLQ----SYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKG 328
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
G + HG +++ + +A A++ MY KCG A F+ E+ D WNA+I
Sbjct: 329 DLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE--EMVSRDAVSWNAII 386
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFG 282
+ + +NG E + +F M Q ++P+ ++ +VL AC ++ ++I ++ G
Sbjct: 387 AAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMG 446
Query: 283 LKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
L G ++D+ + G +++A +L L E TV +++++ S+ ++
Sbjct: 447 L---DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTF 503
Query: 342 MKLQEM--EPENPTPFVIL 358
K+ EM +P+N T IL
Sbjct: 504 SKMLEMGVDPDNFTYATIL 522
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 144/353 (40%), Gaps = 46/353 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF + C+ L G+Q H + E + + L+ MY+KC L A VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--------FKP-------DPATWN 117
R+ ++WN M+ G G A +LF+ + G F+ D T+
Sbjct: 104 P-QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162
Query: 118 SMISGFSQL---GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA----DL-SALKLGKE 169
++ S L G + L KM V + + + + C DL L+L KE
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKE 222
Query: 170 T----------HGHVIRADLNKDESMATALISMYMKCGQPS-WARRFFDQFEIKPDDPAF 218
HGH ++ D D + TA + MYMKC S + + F+ + +
Sbjct: 223 MQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFN--SLPNHNLQS 280
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
+NA+I GY R+ + A+ +F L+Q+ + + S AC + LQ+ +
Sbjct: 281 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGL-- 338
Query: 279 DDFGLKPKQEHFGC----MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+K + C ++D+ G+ G L EA + E+ +++++ A
Sbjct: 339 ---SMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAA 388
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
K + + C+D AL GK+ H +I + + LI MY+KC +A + FD
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDG 102
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ D WNAM+ GY G+ A ++FD M
Sbjct: 103 MPQR--DTVSWNAMLFGYAGRGDIGVAQKLFDAM 134
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 215/384 (55%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACASL L+ G ++H +LK+ ++ + +L+DMY KC A
Sbjct: 376 RPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQT 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++++G NG+ +AM LF+ + A+WN++ISG++Q
Sbjct: 436 IFDTLP-QKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNL----ASWNTIISGYAQNR 490
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M ++G VP +SVL ACA+L +L GK H I+ + + + T
Sbjct: 491 QFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGT 550
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F Q + D W AMI G NG E ++ +F+ M +
Sbjct: 551 ALSDMYAKSGDLQSSKRMFYQMPERND--VTWTAMIQGLAENGFAEESILLFEDMMATGM 608
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H G V++A+ F M G+ PK++H+ CMVD+L R+GRL EA
Sbjct: 609 TPNEHTFLALLFACSHGGLVEQAIHYFDKM-QALGISPKEKHYTCMVDVLARAGRLAEAE 667
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ + P + + + +LL AC + N ++ E A +L E+ +N +V+LSN+YA G
Sbjct: 668 ALLMKTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCG 727
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D RIR ++ L K G S
Sbjct: 728 RWKDAARIRVLMKGTTLKKDGGCS 751
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 162/382 (42%), Gaps = 49/382 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
PN +T + +I AC + GL +K +S + +L+ +YL+ G A
Sbjct: 243 RPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAAR 302
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +++++W ++ +G + A + + + + +W ++I+ Q
Sbjct: 303 KVFDEMD-VKDVVSWTALLDVYSESGDLDGARRVLDAMPER----NEVSWGTLIARHEQR 357
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA KL+ +M + G P++ C +SVLSACA L L+ G H ++ + + ++
Sbjct: 358 GNAAEAVKLYSQMLADGCRPNISCFSSVLSACASLEDLRGGARIHARSLKMGSSTNVFVS 417
Query: 187 TALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPA 217
+LI MY KC + A+ FD ++ + A
Sbjct: 418 CSLIDMYCKCNKCGDAQTIFDTLPQKNIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLA 477
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKALQ 272
WN +ISGY +N ++ A++ F+ M P +F +VL AC + G + A
Sbjct: 478 SWNTIISGYAQNRQFVDALKSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKT 537
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
I G++ + D+ +SG L ++ + ++PE + +++
Sbjct: 538 I------KLGIEESIFIGTALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGL---A 588
Query: 333 NSDLGEEMAMKLQEMEPENPTP 354
+ EE + ++M TP
Sbjct: 589 ENGFAEESILLFEDMMATGMTP 610
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 123/257 (47%), Gaps = 16/257 (6%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + R ++++ TM+ +M GR +A+EL+E
Sbjct: 155 MVSEHVKAGDIASARRLFDGMP-DRTVVSYTTMVDALMKRGRVAEAVELYEQCPSGSV-- 211
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + + ISGF + + A +F KM S + P+ + ++ AC L
Sbjct: 212 --AFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLALSIV 269
Query: 172 GHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G I+++ + + +LI++Y++ G + AR+ FD+ ++K D W A++ Y +G
Sbjct: 270 GLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK--DVVSWTALLDVYSESG 327
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ + A + D M + N S+ +++ G+ +A+++++ M D G +P +
Sbjct: 328 DLDGARRVLDAMPER----NEVSWGTLIARHEQRGNAAEAVKLYSQMLAD-GCRP---NI 379
Query: 291 GCMVDLLGRSGRLDEAR 307
C +L L++ R
Sbjct: 380 SCFSSVLSACASLEDLR 396
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G+ + A ++Q AF+ A ISG+ RN + +A+ +F M +
Sbjct: 184 TTMVDALMKRGRVAEAVELYEQ--CPSGSVAFFTATISGFVRNELHHNALGVFRKMLSCR 241
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN + V ++ AC AG AL I + + E ++ L R G A
Sbjct: 242 VRPNGITIVCMIKACVGAGEFGLALSIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAA 301
Query: 307 RELIRELPEPTVSVYHSLL 325
R++ E+ V + +LL
Sbjct: 302 RKVFDEMDVKDVVSWTALL 320
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF-DQFEIKPDDPAFWNAM 222
L L H H +R+ + D S+A+ L++ Y + + R F D P ++ M
Sbjct: 96 LPLALSLHAHAVRSGVAADRSVASHLLTTYAAFARAAERDRAFGDCVAADAASPFAYDFM 155
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+S + + G+ SA +FD M V S+ ++ A G V +A++++
Sbjct: 156 VSEHVKAGDIASARRLFDGMPDRTV----VSYTTMVDALMKRGRVAEAVELY 203
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 223/384 (58%), Gaps = 10/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++TF +I A + + G Q H ++ Q+D + +LV MY CG + A +
Sbjct: 117 PDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRI 176
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R++++W +M+AG G E A E+F+ + H TW+ MI+G+++
Sbjct: 177 FGQMP-FRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNL----FTWSIMINGYAKNNC 231
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LFE M+ G+V + + SV+S+CA L AL+ G+ H +V+++ + + + TA
Sbjct: 232 FEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTA 291
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY +CG+ A R F++ PD D W+++I G +G A+ F M +
Sbjct: 292 LVDMYWRCGEIEKAIRVFEEL---PDKDSLSWSSIIKGLAVHGHAHKAIHYFSQMVRLGF 348
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + AVLSAC H G VDK L+I+ M D+G++P+ EH+GC+VD+LGR+G+L EA
Sbjct: 349 SPRDITLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAE 408
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I ++P +P + +LLGAC + N+++ E + L E++PE+ +V+LSNIYA G
Sbjct: 409 NFILKMPVKPNAPILGALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAG 468
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WE + +R ++ ++ + K PG S
Sbjct: 469 QWEKLESLRDIMKEKLVKKPPGWS 492
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 142/350 (40%), Gaps = 68/350 (19%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++++ +C+S L+ +HG L+ SD + + L+ + L C +
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALAL------CVDD--STFHK 64
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
N+L + I + N P+ +N +I FS +AF
Sbjct: 65 PTNLLGYAYGIFSQIQN-------------------PNLFVFNVLIRCFSTGAEPSKAFG 105
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ +M + + P ++ A ++ + +G++TH ++R D + +L+ MY
Sbjct: 106 FYTQMLKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYA 165
Query: 195 KCGQPSWARRFFDQ----------------------------FEIKPDDPAF-WNAMISG 225
CG + A R F Q F+ P F W+ MI+G
Sbjct: 166 NCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMING 225
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y +N +E A+++F+LM++E V N V+V+S+C H G ++ F ++ +K
Sbjct: 226 YAKNNCFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALE-----FGERAHEYVVKS 280
Query: 286 KQEHF----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+VD+ R G +++A + ELP+ + S++ H
Sbjct: 281 HMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDSLSWSSIIKGLAVH 330
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 224/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C G +HG K+ ++ M+GTA++ MY K G +
Sbjct: 68 EPNHITFIAILSGCGDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKK 127
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M +G+ + A ++F+ + D +W +MI+GF
Sbjct: 128 ARCVFDYME-DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFV 182
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 183 NKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVR 242
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E+ KP++ +F L+AC H G V++ L+ F +M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 301 ERFKPDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSD-LGEEMAMKLQEMEPENPTPFVILSNIY 362
+A +L++ +P +P V SLL AC H N+ L E++ L ++ ++ + +VILSN+Y
Sbjct: 361 DALKLVQSMPMKPNEVVIGSLLAACRNHGNNTVLAEKLMKHLTDLNVKSHSNYVILSNMY 420
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 421 AADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 126/278 (45%), Gaps = 42/278 (15%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL--SALKLGKE 169
+ +W S I+ ++ G EA K F M+ G+ P+ ++LS C D + LG
Sbjct: 35 NTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALGDL 94
Query: 170 THGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
HG+ + L+++ M TA+I MY K G+ AR FD E K + WN MI GY R
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDK--NSVTWNTMIDGYMR 152
Query: 229 NGEYESAVEIFDL-------------------------------MQQEKVKPNSASFVAV 257
+G+ ++A ++FD MQ VKP+ + +A
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAA 212
Query: 258 LSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
L+AC + G + L + +M DF K ++DL R G ++ AR++ ++ +
Sbjct: 213 LNACTNLGALSFGLWVHRYVMSQDF--KNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKR 270
Query: 317 TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
TV ++S++ + N+ E + ++M+ E P
Sbjct: 271 TVVSWNSVIVGFAANGNA---HESLVYFRKMQEERFKP 305
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 211/383 (55%), Gaps = 12/383 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF+S++ AC+S+ L GR VH L+ S+ + TALV+MY KCG L A VF +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 73 KGSRNILTWNTMIAGMMLNGR---SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
K +R+ + W+T+I NG + KA ++F+ L D WN+MI+ + Q G
Sbjct: 370 K-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR----DTICWNAMITTYVQNGCA 424
Query: 130 FEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A K+F +M + G+ P +VL ACA L L K H + ++L + +
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY +CG A R F K W AM++ + + G Y A+++F M E VK
Sbjct: 485 LINMYARCGSLEEAERLFAA--AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ ++ ++L C H G +++ + FT M + GL P +HF MVDLLGRSGRL +A+E
Sbjct: 543 PDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKE 602
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ +P EP + + L AC H +LGE A ++ E++P + P++ +SNIYA G
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +R+ + +R L KLPG+S
Sbjct: 663 WEKVASVRKKMEERGLKKLPGLS 685
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 177/386 (45%), Gaps = 72/386 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T+I+VIS ++ L GR++H + SD ++ TAL++MY KCG A
Sbjct: 204 KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEARE 263
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++K R++++WN MI + NG +A+EL++ L EGFK AT+
Sbjct: 264 VFDKMK-KRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATF----------- 311
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
S+L AC+ + AL G+ H H++ L+ + ++AT
Sbjct: 312 ------------------------VSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 188 ALISMYMKCGQPSWARRFFDQFE--------------------------------IKPDD 215
AL++MY KCG AR+ F+ + + D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 216 PAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
WNAMI+ Y +NG +A++IF ++ +KP++ +F+AVL AC G + + +
Sbjct: 408 TICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC--WCHL 332
+ + L+ ++++ R G L+EA L E TV + +++ A +
Sbjct: 468 AQISES-ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRY 526
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVIL 358
L M L+ ++P++ T IL
Sbjct: 527 AEALDLFQEMDLEGVKPDDVTYTSIL 552
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 66/383 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++VTF++V+ +C+S + GR +H + DTM+G AL+ MY KC L A +
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 68 VFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW---------- 116
VF+ + RN+++WN MIA NG S +A+ L+ + +G D T+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 117 ----------------------NSMISGFSQLGMRFEAFKLFEKMQST------------ 142
N++++ +++ G +A ++F+ +Q+
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 143 ------------------GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
M P+ +V+S + L G++ H ++ + D
Sbjct: 184 SQSGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLV 243
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ATALI+MY KCG AR FD+ +K D WN MI Y +NG++ A+E++ +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDK--MKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDM 301
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E K A+FV++L AC + + + + + + GL + +V++ + G L+
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLE 360
Query: 305 EARELIRELPEPTVSVYHSLLGA 327
EAR++ + + +L+GA
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGA 383
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 226/424 (53%), Gaps = 49/424 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T ISV+ CA+ L G+ VH L +K + L+DMY KCG L A VF+++
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA------------------ 114
G RN+++W +MIAG +GRS+ A++L + + EG K D
Sbjct: 313 -GERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNG 371
Query: 115 -----------------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMV----------PS 147
N+++ +++ G A +F M ++ P
Sbjct: 372 KDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPD 431
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ + VL ACA LSAL+ GKE HG+++R + D +A AL+ +Y+KCG AR FD
Sbjct: 432 SRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 491
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
I D W MI+GYG +G A+ F+ M+ ++P+ SF+++L AC H+G +
Sbjct: 492 M--IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 549
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLG 326
++ + F +M +DF ++PK EH+ CMVDLL R+G L +A E + LP P +++ +LL
Sbjct: 550 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLC 609
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
C + + +L E++A ++ E+EPEN +V+L+NIYA +WE+V R+R+ I + L K
Sbjct: 610 GCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKN 669
Query: 387 PGIS 390
PG S
Sbjct: 670 PGCS 673
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 160/341 (46%), Gaps = 24/341 (7%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C E + T+ SV+ CA L G++VH + D +G LV Y CG L
Sbjct: 92 CQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLK 151
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH---EGFKPDPA------ 114
VF ++ +N+ WN M++ G ++++ LF+ + EG +P+ A
Sbjct: 152 EGRRVFDTME-KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDK 210
Query: 115 -------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
+WNSMISG+ G+ ++++M G+ L + SVL CA+ L LG
Sbjct: 211 LCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLG 270
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
K H I++ + + + L+ MY KCG A R F++ + + W +MI+GY
Sbjct: 271 KAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEK--MGERNVVSWTSMIAGYT 328
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
R+G + A+++ M++E VK + + ++L AC +G +D + + + +
Sbjct: 329 RDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKAN---NMES 385
Query: 288 EHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
F C ++D+ + G ++ A + + + +++++G
Sbjct: 386 NLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIG 426
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 212/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T SV+ A + L G+++HG ++ +D IG++L+DMY KC + +
Sbjct: 233 RPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCR 292
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L H+G +WNS+I+G Q G
Sbjct: 293 VFYMLP-------------------------------QHDGI-----SWNSIIAGCVQNG 316
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M E K F++M + P+ +S++ ACA L+ L LGK+ HG++IR+ + + +A+
Sbjct: 317 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD+ E+ D W AMI GY +G A+ +F M+ E V
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELY--DMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV 434
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+AVL+AC HAG VD+A + F M D+ + P EH+ + DLLGR GRL+EA
Sbjct: 435 KPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAY 494
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++ EPT SV+ +LL AC H N +L E+++ KL ++P+N +V+LSNIY+ G
Sbjct: 495 EFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAG 554
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D ++R + D+ + K P S
Sbjct: 555 RWKDARKLRIAMRDKGMKKKPACS 578
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 145/313 (46%), Gaps = 26/313 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP---CA 65
P+ F SV+ +C + L+FG VHG +++ D AL++MY K L
Sbjct: 104 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTY 163
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF E K S ++ G K E+ K D +WN++ISG +Q
Sbjct: 164 KKVFDEGKTSD---VYSKKEKESYYLGSLRKVFEMMP-------KRDIVSWNTVISGNAQ 213
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
GM +A + +M + + P ++SVL A+ L GKE HG+ IR + D +
Sbjct: 214 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 273
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
++LI MY KC + + R F + + D WN++I+G +NG ++ ++ F M
Sbjct: 274 GSSLIDMYAKCTRVDDSCRVF--YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIA 331
Query: 246 KVKPNSASFVAVLSACGHAG--HVDKALQ---IFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
K+KPN SF +++ AC H H+ K L I + D + + +VD+ +
Sbjct: 332 KIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIA------SALVDMYAKC 385
Query: 301 GRLDEARELIREL 313
G + AR + ++
Sbjct: 386 GNIRTARWIFDKM 398
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 106/248 (42%), Gaps = 31/248 (12%)
Query: 111 PDPAT---WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
P P T W S+I ++ G+ + F +M ++G P SVL +C + L+ G
Sbjct: 66 PSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFG 125
Query: 168 KETHGHVIRADLNKDESMATALISMYMK---CGQPSWARRFFDQ---------------- 208
+ HG +IR + D AL++MY K + + ++ FD+
Sbjct: 126 ESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYY 185
Query: 209 -------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
FE+ P D WN +ISG +NG +E A+ + M ++P+S + +VL
Sbjct: 186 LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPI 245
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
++ K +I + G ++D+ + R+D++ + LP+
Sbjct: 246 FAEYVNLLKGKEIHGYAIRN-GYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 304
Query: 321 YHSLLGAC 328
++S++ C
Sbjct: 305 WNSIIAGC 312
>gi|296084034|emb|CBI24422.3| unnamed protein product [Vitis vinifera]
Length = 502
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 221/388 (56%), Gaps = 27/388 (6%)
Query: 8 EPNSVTFISVISACAS--LLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPC 64
PN +TF++++SAC L L+FG +H K+ + + M+GTALVDMY KCG L
Sbjct: 86 RPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDL 145
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ RN ++WNTMI G M NG +A+ LF+ ++ D +W SMI GF
Sbjct: 146 AWLMFDEMH-VRNSVSWNTMIDGCMRNGEVGEAIVLFDQMSER----DAISWTSMIGGFV 200
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G +A + F +MQ G+ P + SVL+ACA+L AL LG + V++ D +
Sbjct: 201 KKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGALGLGLWINRFVMKQDFKDNIK 260
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI MY +CG AR+ F+Q + WN+MI G+ NG E A+E F+LM++
Sbjct: 261 ISNSLIDMYSRCGCIRLARQVFEQMPKR--SLVSWNSMIVGFALNGHAEEALEFFNLMRK 318
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E GH+G VD+ LQ F +M + P+ EH+GC+VDL R+GRL+
Sbjct: 319 E----------------GHSGLVDEGLQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLE 362
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A +I +P +P V SLL AC H + L E + L E++P + + +V+LSNIYA
Sbjct: 363 DALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYA 422
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
+GRW+ ++R+ + + K PG S+
Sbjct: 423 AVGRWDGASKVRKKMKALGIHKKPGFSS 450
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 42/258 (16%)
Query: 105 AHEGFKPDP-ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--L 161
+H DP +W S I+ + G EA F +MQ G+ P+ ++LSAC D L
Sbjct: 45 SHTHSPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPL 104
Query: 162 SALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
L+ G H +V + L+ + M TAL+ MY KCGQ A FD+ ++ + WN
Sbjct: 105 EGLRFGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVR--NSVSWN 162
Query: 221 AMISGYGRNGE-------------------------------YESAVEIFDLMQQEKVKP 249
MI G RNGE +E A+E F MQ V+P
Sbjct: 163 TMIDGCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEP 222
Query: 250 NSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + ++VL+AC + G + L I F M D K + ++D+ R G + AR
Sbjct: 223 DYVTIISVLAACANLGALGLGLWINRFVMKQD---FKDNIKISNSLIDMYSRCGCIRLAR 279
Query: 308 ELIRELPEPTVSVYHSLL 325
++ ++P+ ++ ++S++
Sbjct: 280 QVFEQMPKRSLVSWNSMI 297
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 213 PDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-------- 263
P DP W + I+ + RNG+ A F MQ V+PN +F+ +LSAC
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
G + ++ GL + G +VD+ + G+LD A + E+ ++
Sbjct: 110 GGSIHAYVR-------KLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWN 162
Query: 323 SLLGACWCHLNSDLGEEMAM 342
+++ C N ++GE + +
Sbjct: 163 TMIDGCM--RNGEVGEAIVL 180
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 218/377 (57%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C S + L GRQ+H L LK + ++ +L+ MY KC L A +F+ +
Sbjct: 396 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-E 454
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++I++W +MI G KA E F+G++ + + TWN+M+ + Q G + ++
Sbjct: 455 KDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRM 510
Query: 136 FEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
++ M S V P ++ CADL A KLG + G ++ L D S+A A+I+MY
Sbjct: 511 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 570
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ AR+ FD +K D WNAMI+GY ++G + A+EIFD + + KP+ S+
Sbjct: 571 KCGRILEARKVFDFLNVK--DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 628
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM + P EHF CMVDLLGR+G L EA++LI ++P
Sbjct: 629 VAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMP 688
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N++L E A + E++ + +++++ IYA G+ +D +
Sbjct: 689 MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ 748
Query: 374 IRQMINDRQLTKLPGIS 390
IR+++ D+ + K PG S
Sbjct: 749 IRKLMRDKGIKKNPGYS 765
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 173/390 (44%), Gaps = 39/390 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T + +C +L + Q+ + K + Q D+ + ALVDM+++CG + A +
Sbjct: 156 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 215
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K + N+M+AG + + A+ELF+ + D +WN M+S SQ G
Sbjct: 216 FVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER----DVVSWNMMVSALSQSGR 270
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + MQS G+ TS L+ACA LS+L+ GK+ H VIR + D +A+A
Sbjct: 271 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASA 330
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G A+ F+ + + W +ISG+ + G + +VE+F+ M+ E +
Sbjct: 331 LVELYAKSGCFKEAKGVFNSLHDR--NNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388
Query: 249 PNSASFVAVLSAC-------------------GHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+ + ++S C G V + + +M L+ +
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448
Query: 290 F-----------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
F M+ + G + +ARE + E V ++++LGA H + G
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 508
Query: 339 EMAMKLQEMEPENP--TPFVILSNIYAGLG 366
M + E P +V L A LG
Sbjct: 509 RMYKVMLSEEYVRPDWVTYVTLFKGCADLG 538
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 26/317 (8%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F + +C + L R +HG + + S + L+ YL CG L A +
Sbjct: 27 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 86
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQLGMRFE 131
N++T N M+ G GR A+ELF G P D A+WN+++SG+ Q
Sbjct: 87 AHPNVITHNVMLNGYAKLGRLSDAVELF------GRMPARDVASWNTLMSGYFQSRQYLV 140
Query: 132 AFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ + F M +G P+ + + +C L L + V + D D +A AL+
Sbjct: 141 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 200
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKVK 248
M+++CG A R F ++ +P + N+M++GY + + A+E+FD M + V
Sbjct: 201 DMFVRCGAVDLASRLF----VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDV- 255
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
S+ ++SA +G V +AL + M G++ + + R L ++
Sbjct: 256 ---VSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLTACARLSSLRWGKQ 311
Query: 309 L----IRELP--EPTVS 319
L IR LP +P V+
Sbjct: 312 LHAQVIRNLPHIDPYVA 328
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 2 KECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLK 58
K LS+E P+ VT++++ CA L + G Q+ G T+K+ DT + A++ MY K
Sbjct: 512 KVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSK 571
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
CG + A VF L ++I++WN MI G +G ++A+E+F+ + G KPD ++ +
Sbjct: 572 CGRILEARKVFDFLN-VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 630
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++SG S G+ E F+ M+ H I
Sbjct: 631 VLSGCSHSGLVQEGKFYFDMMK------------------------------RAHNISPG 660
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----S 234
L M + + + G + A+ D +KP W A++S +G E +
Sbjct: 661 LEHFSCM----VDLLGRAGHLTEAKDLIDDMPMKP-TAEVWGALLSACKIHGNNELAELA 715
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
A +F+L P+S S++ + AG D + QI +M D
Sbjct: 716 AKHVFEL-----DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 755
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 219/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT I+V+SAC+ + L+ G++VH + + + AL+DMY+KC CL A
Sbjct: 355 EPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARE 414
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++ +W +M+ G G E A F+ + + + W++MI+G+SQ
Sbjct: 415 LFDRM-ATKDVYSWTSMVNGYAKCGDLESARRFFD----QTPRKNAVCWSAMIAGYSQNN 469
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH-VIRADLNKDESMA 186
E+ KLF +M G+VP + SVLSAC L+ L LG H + V+ + ++
Sbjct: 470 KPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLE 529
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A++ MY KCG A F + + WN MI+GY NG + A+ +FD M+
Sbjct: 530 NAIVDMYAKCGSIDAATEVFST--MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMG 587
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+PN+ +FV++L+AC H G + + + F M+ +G+KP++ H+ CMVDLLGR+G L+EA
Sbjct: 588 FEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEA 647
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI +P +P + + +LL AC H N +L A L ++PE+ +V+L+N A
Sbjct: 648 YKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCAND 707
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R+R ++ D+ + K+PG S
Sbjct: 708 RKWSDVRRVRSLMKDKGVKKIPGYS 732
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 157/324 (48%), Gaps = 11/324 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L E +S +F+ + AC + G V+ + K+ + ++ L+ Y + G L
Sbjct: 251 LRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKN 310
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF E ++++TW TMI G + SE+AME+FE + +P+ T +++S S
Sbjct: 311 ARQVFDE-SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACS 369
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+G ++ EK++ M SL ++L L +E + KD
Sbjct: 370 DMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA----TKDVY 425
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
T++++ Y KCG ARRFFDQ K + W+AMI+GY +N + + ++++F M +
Sbjct: 426 SWTSMVNGYAKCGDLESARRFFDQTPRK--NAVCWSAMIAGYSQNNKPKESLKLFHEMME 483
Query: 245 EKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V P + V+VLSACG ++ + + ++ L E+ +VD+ + G
Sbjct: 484 RGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLEN--AIVDMYAKCGS 541
Query: 303 LDEARELIRELPEPTVSVYHSLLG 326
+D A E+ +PE + +++++
Sbjct: 542 IDAATEVFSTMPERNLISWNTMIA 565
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G +A F++ E +P+ WN MI GY + A F M Q +V+ +S SFV
Sbjct: 205 GDLHYAHTIFNRVE-QPNT-FMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVF 262
Query: 257 VLSACGHAGHVDKALQIFTMM-----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
L AC V + ++ ++ D + ++ HF G L AR++
Sbjct: 263 ALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHF------YAERGLLKNARQVFD 316
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGLGRWE 369
E + V + +++ H S+ E+ M L +EP T ++S + +G E
Sbjct: 317 ESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSAC-SDMGNLE 375
Query: 370 DVGRIRQMINDRQL 383
R+ + + ++ +
Sbjct: 376 MGKRVHEKVEEKNM 389
>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
Length = 679
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 212/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T SV+ A + L G+++HG ++ +D IG++L+DMY KC + +
Sbjct: 193 RPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCR 252
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L H+G +WNS+I+G Q G
Sbjct: 253 VFYMLP-------------------------------QHDGI-----SWNSIIAGCVQNG 276
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M E K F++M + P+ +S++ ACA L+ L LGK+ HG++IR+ + + +A+
Sbjct: 277 MFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 336
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD+ E+ D W AMI GY +G A+ +F M+ E V
Sbjct: 337 ALVDMYAKCGNIRTARWIFDKMELY--DMVSWTAMIMGYALHGHAYDAISLFKRMEVEGV 394
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+AVL+AC HAG VD+A + F M D+ + P EH+ + DLLGR GRL+EA
Sbjct: 395 KPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAY 454
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++ EPT SV+ +LL AC H N +L E+++ KL ++P+N +V+LSNIY+ G
Sbjct: 455 EFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAG 514
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D ++R + D+ + K P S
Sbjct: 515 RWKDARKLRIAMRDKGMKKKPACS 538
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 149/353 (42%), Gaps = 62/353 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP----- 63
P+ F SV+ +C + L+FG VHG +++ D AL++MY K L
Sbjct: 8 PDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEGGVQ 67
Query: 64 --CAHNVFQELKGSRNI----------LTWNTMIAGMMLNGRSE---------------- 95
C + + R I + +AG+ NG
Sbjct: 68 RFCDSKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMSNILYQVNTYKKVF 127
Query: 96 ---KAMELFEGLAHEGF-------------KPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
K +++ E + K D +WN++ISG +Q GM +A + +M
Sbjct: 128 DEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREM 187
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
+ + P ++SVL A+ L GKE HG+ IR + D + ++LI MY KC +
Sbjct: 188 GNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRV 247
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ R F + + D WN++I+G +NG ++ ++ F M K+KPN SF +++
Sbjct: 248 DDSCRVF--YMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMP 305
Query: 260 ACGHAG--HVDKALQ---IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
AC H H+ K L I + D + + +VD+ + G + AR
Sbjct: 306 ACAHLTTLHLGKQLHGYIIRSRFDGNVFIA------SALVDMYAKCGNIRTAR 352
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
M ++G P SVL +C + L+ G+ HG +IR + D AL++MY K
Sbjct: 1 MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSK 57
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 220/391 (56%), Gaps = 20/391 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVH------GLTLKIEKQSDTMIGTALVDMYLKCGC 61
+P+ VT I V+SACA L L+ GR++H GL LKI + AL+DMY+KCG
Sbjct: 252 KPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKIS------LVNALMDMYVKCGD 305
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L +F ++ + +++W TMI G NG + A +LF H+ + + WN+MI
Sbjct: 306 LEAGKVLFDNMR-KKTVVSWTTMIVGYAKNGLLDMAGKLF----HDMPEKNVVAWNAMIG 360
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
Q + FEA +LF +MQ + M P + LSAC+ L AL G TH ++ + +L+
Sbjct: 361 SCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSL 420
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D ++ TALI MY KCG + A + F+ E+ + W A+I G G A+ F
Sbjct: 421 DVALGTALIDMYAKCGNMTKALQVFN--EMPRRNSLTWTAIIGGLALYGNVNDAIFYFSK 478
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M + P+ +F+ VL+AC H G V++ + F M F L P+ +H+ CMV+LLGR+G
Sbjct: 479 MIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAG 538
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L+EA ELI+ +P E V+ +L AC H N +GE A KL +++P + +V+L+N
Sbjct: 539 LLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLAN 598
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+Y G+WE+ IR+M+ +R + K PG S+
Sbjct: 599 MYREAGKWEEAQNIRKMMMERGVEKTPGSSS 629
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 140/351 (39%), Gaps = 70/351 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T+ + CA+L+ G ++ G LK+ D + ++ M + G AH
Sbjct: 151 RPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHK 210
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E G D +WNS+I+G+ +
Sbjct: 211 VFDE------------------------------------GCVRDLVSWNSLINGYVRRR 234
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++++M + + P + V+SACA L +LKLG+E H ++ + LN S+
Sbjct: 235 QPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVN 294
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE-------------- 233
AL+ MY+KCG + FD ++ W MI GY +NG +
Sbjct: 295 ALMDMYVKCGDLEAGKVLFDN--MRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNV 352
Query: 234 -----------------SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
A+E+F MQ +KP+ + + LSAC G +D +
Sbjct: 353 VAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNY 412
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ L ++D+ + G + +A ++ E+P + +++G
Sbjct: 413 IKKH-NLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGG 462
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 212/385 (55%), Gaps = 41/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L G ++H +K D+ +G AL+DMY KCG +
Sbjct: 474 EPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMM----- 528
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
EKA +L + LA + +WN++ISGFS
Sbjct: 529 ---------------------------EKAEKLHDRLAEQTV----VSWNAIISGFSLQK 557
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F KM G+ P ++L CA+L ++LGK+ H +I+ +L D +++
Sbjct: 558 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 617
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L+ MY KCG + F FE P+ D WNAM+ GY ++G E A++IF+ MQ E
Sbjct: 618 TLVDMYSKCGN---MQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 674
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN A+F+AVL ACGH G V+K L F M ++GL P+ EH+ C+VD++GRSG++ +A
Sbjct: 675 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 734
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI +P E ++ +LL C H N ++ E+ A + ++EPE+ +V+LSNIYA
Sbjct: 735 LELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANA 794
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W +V ++R+M+ L K PG S
Sbjct: 795 GMWNEVTKLRKMMRFNGLKKEPGCS 819
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 167/408 (40%), Gaps = 73/408 (17%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV +CA L L+ G Q+HG LK + +D +IGTA +DMY+KC L A +F L
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSL 336
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW---------------- 116
+ N+ ++N +I G + + +A+ +F L G D +
Sbjct: 337 P-NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEG 395
Query: 117 -------------------NSMISGFSQLGMRFEAFKLFEKMQS---------------- 141
N+++ + + G EA +FE+M S
Sbjct: 396 LQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQN 455
Query: 142 ---------------TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+GM P SVL ACA AL G E H +I++ L D +
Sbjct: 456 GNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG 515
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG A + D+ + WNA+ISG+ + E A + F M +
Sbjct: 516 IALIDMYSKCGMMEKAEKLHDR--LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMG 573
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P++ ++ +L C + V+ QI + L+ +VD+ + G + +
Sbjct: 574 VDPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTLVDMYSKCGNMQDF 632
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + + P +++++ + LGEE + M+ EN P
Sbjct: 633 QLIFEKAPNRDFVTWNAMVCG---YAQHGLGEEALKIFEYMQLENVKP 677
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 47/322 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF V+ +C+SL G Q+HGL +K+ D + G+AL+DMY KC L C+ F
Sbjct: 173 DRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFF 232
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ +N ++W+ +IAG + N +EL
Sbjct: 233 HSMP-EKNWVSWSAIIAGCVQNDDLRGGLEL----------------------------- 262
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
F++MQ G+ S SV +CA LSAL+LG + HGH ++ D D + TA
Sbjct: 263 ------FKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MYMKC S A++ F+ + + +NA+I GY R+ + A+ +F L+Q+ +
Sbjct: 317 LDMYMKCNNLSDAQKLFN--SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 374
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----MVDLLGRSGRLDE 305
+ S AC + LQ+ + +K + C ++D+ G+ G L E
Sbjct: 375 DEVSLSGAFRACAVIKGDLEGLQVHGL-----SMKSLCQSNICVANAILDMYGKCGALVE 429
Query: 306 ARELIRELPEPTVSVYHSLLGA 327
A + E+ +++++ A
Sbjct: 430 ACLVFEEMVSRDAVSWNAIIAA 451
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF + C+ L G+Q H + E + + L+ MY+KC L A VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++WN M+ G G A +LF+ + D +WNS+ISG+ G +
Sbjct: 104 P-QRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNGDHRKV 158
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+F +M G V VL +C+ L G + HG ++ + D +AL+ M
Sbjct: 159 IDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDM 218
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + + +FF K + W+A+I+G +N + +E+F MQ+ V + +
Sbjct: 219 YAKCKKLDCSIQFFHSMPEK--NWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQS 276
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F +V +C + Q+ + DFG +D+ + L +A++L
Sbjct: 277 TFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIG--TATLDMYMKCNNLSDAQKLFN 334
Query: 312 ELPEPTVSVYHSLL 325
LP + Y++++
Sbjct: 335 SLPNHNLQSYNAII 348
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
K + + C+D AL GK+ H +I + + LI MY+KC +A + FD
Sbjct: 43 KTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDG 102
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ D WNAM+ GY G+ A ++FD M + V S+ +++S H G
Sbjct: 103 MPQR--DTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV----VSWNSLISGYLHNGDHR 156
Query: 269 KALQIFTMM 277
K + +F M
Sbjct: 157 KVIDVFLQM 165
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 212/384 (55%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P SVTF S+ A A L L G+++HG +K + +G+A++DMY KCG L A
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACR 417
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + +EK D WNSMI+ SQ G
Sbjct: 418 VFNRI---------------------TEK---------------DAICWNSMITSCSQNG 441
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G ++ LSACA+L AL GKE HG +I+ L D +
Sbjct: 442 RPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAES 501
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG +++RR FD+ + K + WN++IS YG +G+ + + +F M + +
Sbjct: 502 SLIDMYAKCGNLNFSRRVFDRMQEK--NEVSWNSIISAYGNHGDLKECLALFHEMLRNGI 559
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ ++SACGHAG VD+ ++ + +M +++G+ + EH+ C+ D+ GR+GRL EA
Sbjct: 560 QPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAF 619
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I +P P V+ +LLGAC H N +L E + L +++P N +V+L+N+ AG G
Sbjct: 620 ETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAG 679
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W V ++R ++ +R + K+PG S
Sbjct: 680 KWRKVLKVRSIMKERGVRKVPGYS 703
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 149/327 (45%), Gaps = 51/327 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVTF V+S CAS L G Q+HG+ + + D+ + L+ MY KC CL A
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARK 215
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L S D +WN +ISG+ Q G
Sbjct: 216 LFDTLPQS------------------------------------DLVSWNGIISGYVQNG 239
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF M S G+ P S L +L +LK KE HG++IR + D + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI +Y KC A++ Q D MISGY NG+ + A+E F + QE++
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSS--SFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERM 357
Query: 248 KPNSASFVAVLSACG--HAGHVDKALQ---IFTMMDDDFGLKPKQEHFG-CMVDLLGRSG 301
KP S +F ++ A A ++ K L I T +D+ + H G ++D+ + G
Sbjct: 358 KPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDE-------KCHVGSAILDMYAKCG 410
Query: 302 RLDEARELIRELPEPTVSVYHSLLGAC 328
RLD A + + E ++S++ +C
Sbjct: 411 RLDLACRVFNRITEKDAICWNSMITSC 437
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 47/357 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+TF S + LL L+ +++HG ++ D + +AL+D+Y KC
Sbjct: 257 KPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC-------- 308
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ +E+ + + D +MISG+ G
Sbjct: 309 ----------------------------RDVEMAQKNLCQSSSFDTVVCTTMISGYVLNG 340
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F + M P+ +S+ A A L+AL LGKE HG +I+ L++ + +
Sbjct: 341 KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGS 400
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG+ A R F++ I D WN+MI+ +NG A+ +F M E
Sbjct: 401 AILDMYAKCGRLDLACRVFNR--ITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGT 458
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + S LSAC + + +I +M L+ ++D+ + G L+ +R
Sbjct: 459 RYDCVSISGALSACANLPALHYGKEIHGLMIKG-PLRSDLYAESSLIDMYAKCGNLNFSR 517
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
+ + E ++S++ A H DL E +A+ EM +P++ T I+S
Sbjct: 518 RVFDRMQEKNEVSWNSIISAYGNH--GDLKECLAL-FHEMLRNGIQPDHVTFLGIIS 571
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
+ WN MI GF+ +G A + KM G+ P V+ AC L ++K+GK H
Sbjct: 24 SAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHET 83
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
V L +D + ++LI +Y + G S A+ FD I D WN M++GY +NG+
Sbjct: 84 VNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN--IPQKDSVLWNVMLNGYVKNGDSG 141
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+A++IF M+ ++KPNS +F VLS C +D Q+ + GL+ +
Sbjct: 142 NAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIA-VGCGLELDSPVANTL 200
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + + L AR+L LP+ + ++ ++
Sbjct: 201 LAMYSKCQCLQAARKLFDTLPQSDLVSWNGII 232
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 38/250 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ AC L ++ G+ VH + + D +G++L+ +Y +
Sbjct: 56 PDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAE---------- 105
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
NG A LF+ + + D WN M++G+ + G
Sbjct: 106 ----------------------NGHLSDAQYLFDNIPQK----DSVLWNVMLNGYVKNGD 139
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A K+F +M+ + + P+ VLS CA + L LG + HG + L D +A
Sbjct: 140 SGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANT 199
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KC AR+ FD + D WN +ISGY +NG A +F M +K
Sbjct: 200 LLAMYSKCQCLQAARKLFDT--LPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIK 257
Query: 249 PNSASFVAVL 258
P+S +F + L
Sbjct: 258 PDSITFASFL 267
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 218/377 (57%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C S + L GRQ+H L LK + ++ +L+ MY KC L A +F+ +
Sbjct: 376 TLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMN-E 434
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++I++W +MI G KA E F+G++ + + TWN+M+ + Q G + ++
Sbjct: 435 KDIVSWTSMITAYSQVGNVAKAREFFDGMS----EKNVITWNAMLGAYIQHGAEEDGLRM 490
Query: 136 FEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
++ M S V P ++ CADL A KLG + G ++ L D S+A A+I+MY
Sbjct: 491 YKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYS 550
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ AR+ FD +K D WNAMI+GY ++G + A+EIFD + + KP+ S+
Sbjct: 551 KCGRILEARKVFDFLNVK--DIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISY 608
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM + P EHF CMVDLLGR+G L EA++LI ++P
Sbjct: 609 VAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMP 668
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N++L E A + E++ + +++++ IYA G+ +D +
Sbjct: 669 MKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQ 728
Query: 374 IRQMINDRQLTKLPGIS 390
IR+++ D+ + K PG S
Sbjct: 729 IRKLMRDKGIKKNPGYS 745
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 131/253 (51%), Gaps = 7/253 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T + +C +L + Q+ + K + Q D+ + ALVDM+++CG + A +
Sbjct: 136 PNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRL 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K + N+M+AG + + A+ELF+ + D +WN M+S SQ G
Sbjct: 196 FVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSMPER----DVVSWNMMVSALSQSGR 250
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + MQS G+ TS L+ACA LS+L+ GK+ H VIR + D +A+A
Sbjct: 251 VREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASA 310
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G A+ F+ + + W +ISG+ + G + +VE+F+ M+ E +
Sbjct: 311 LVELYAKSGCFKEAKGVFNSLHDR--NNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368
Query: 249 PNSASFVAVLSAC 261
+ + ++S C
Sbjct: 369 LDQFALATLISGC 381
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 142/348 (40%), Gaps = 71/348 (20%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ S ++ACA L L++G+Q+H ++ D + +ALV++Y K GC A VF
Sbjct: 269 DSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVF 328
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L N+ W +ISGF Q G
Sbjct: 329 NSLHDRNNV------------------------------------AWTVLISGFLQYGCF 352
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E+ +LF +M++ M + +++S C L LG++ H +++ + ++ +L
Sbjct: 353 TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSL 412
Query: 190 ISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPAF 218
ISMY KC G + AR FFD K +
Sbjct: 413 ISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEK--NVIT 470
Query: 219 WNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAM+ Y ++G E + ++ +M +E V+P+ ++V + C G QI
Sbjct: 471 WNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 530
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL ++ + + GR+ EAR++ L + +++++
Sbjct: 531 -VKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMI 577
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 140/317 (44%), Gaps = 26/317 (8%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F + +C + L R +HG + + S + L+ YL CG L A +
Sbjct: 7 FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDI 66
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQLGMRFE 131
N++T N M+ G GR A+ELF G P D A+WN+++SG+ Q
Sbjct: 67 AHPNVITHNVMLNGYAKLGRLSDAVELF------GRMPARDVASWNTLMSGYFQSRQYLV 120
Query: 132 AFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ + F M +G P+ + + +C L L + V + D D +A AL+
Sbjct: 121 SLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALV 180
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKVK 248
M+++CG A R F ++ +P + N+M++GY + + A+E+FD M + V
Sbjct: 181 DMFVRCGAVDLASRLF----VRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDV- 235
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
S+ ++SA +G V +AL + M G++ + + R L ++
Sbjct: 236 ---VSWNMMVSALSQSGRVREALDMVVDMQSK-GVRLDSTTYTSSLTACARLSSLRWGKQ 291
Query: 309 L----IRELP--EPTVS 319
L IR LP +P V+
Sbjct: 292 LHAQVIRNLPHIDPYVA 308
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 2 KECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLK 58
K LS+E P+ VT++++ CA L + G Q+ G T+K+ DT + A++ MY K
Sbjct: 492 KVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSK 551
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
CG + A VF L ++I++WN MI G +G ++A+E+F+ + G KPD ++ +
Sbjct: 552 CGRILEARKVFDFLN-VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVA 610
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++SG S G+ E F+ M+ H I
Sbjct: 611 VLSGCSHSGLVQEGKFYFDMMK------------------------------RAHNISPG 640
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----S 234
L M + + + G + A+ D +KP W A++S +G E +
Sbjct: 641 LEHFSCM----VDLLGRAGHLTEAKDLIDDMPMKP-TAEVWGALLSACKIHGNNELAELA 695
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
A +F+L P+S S++ + AG D + QI +M D
Sbjct: 696 AKHVFEL-----DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRD 735
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 224/385 (58%), Gaps = 13/385 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F V+ C L LQ +QVHG L S+ ++ +++VD Y KCG + CA +F
Sbjct: 194 NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLF 253
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ ++I W T+++G G A ELF H+ + +P +W+++ISG+++ +
Sbjct: 254 DEML-VKDIHAWTTIVSGYAKWGDMNSASELF----HQMPEKNPVSWSALISGYARNSLG 308
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F KM G+ P +S L ACA ++ALK GK+ HG++IR + + ++L
Sbjct: 309 HEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSL 368
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + F K D WN MIS +NG E A+++F+ M + +KP
Sbjct: 369 IDMYSKCGMLEASCCVFHLMGNK-QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKP 427
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +LSAC H+G V + L+ F M D G+ P QEH+ C++DLLGR+G EL
Sbjct: 428 DRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCF---VEL 484
Query: 310 IRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ EL +P V+ +LLG C H N +LG ++A ++ E++P++ +V L+++YA L
Sbjct: 485 VNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFL 544
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE V ++R++++++ + K GIS
Sbjct: 545 GKWESVEKVRELMDEKFIRKERGIS 569
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
F+ ++ CA Y + G+ VH L LK K+ T++ L+ MY +CG A VF +
Sbjct: 65 FVDLLRLCAKAKYFKGGKCVH-LHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDK 123
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ RN+ +WN M+AG G A +LF+ + + D +WN+++ +++ G E
Sbjct: 124 M-SVRNLYSWNHMLAGYAKLGDVNNARKLFDRM----MEKDVVSWNTIVLAYAKQGCFNE 178
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A L+ + M + VL C L L+L K+ HG V+ A + ++++++
Sbjct: 179 AIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVD 238
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y KCG+ AR FD+ +K D W ++SGY + G+ SA E+F M ++ N
Sbjct: 239 AYAKCGEMRCARTLFDEMLVK--DIHAWTTIVSGYAKWGDMNSASELFHQMPEK----NP 292
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
S+ A++S +AL FT M FG+ P+Q F
Sbjct: 293 VSWSALISGYARNSLGHEALDYFTKM-MKFGINPEQYTF 330
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF S + ACAS+ L+ G+QVHG ++ + +T++ ++L+DMY KCG L + V
Sbjct: 325 PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCV 384
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++ WNTMI+ + NG EKAM++F + G KPD T+ ++S S G+
Sbjct: 385 FHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 129 RFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E + F+ M G+ P C+ +L L E D+
Sbjct: 445 VQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELEN------MSCKPDDR 498
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +AL+ + R+ ++ E+KP A + ++ S Y G++ES ++ +LM
Sbjct: 499 VWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMD 558
Query: 244 QEKVK 248
++ ++
Sbjct: 559 EKFIR 563
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-ATAL 189
EA +++ G+ +L CA K GK H H+ + ++ A L
Sbjct: 45 EALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY +CG+ AR+ FD+ ++ + WN M++GY + G+ +A ++FD M ++ V
Sbjct: 105 IGMYFECGRDVEARKVFDKMSVR--NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV-- 160
Query: 250 NSASFVAVLSACGHAGHVDKALQIF 274
S+ ++ A G ++A+ ++
Sbjct: 161 --VSWNTIVLAYAKQGCFNEAIGLY 183
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 224/385 (58%), Gaps = 13/385 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +F V+ C L LQ +QVHG L S+ ++ +++VD Y KCG + CA +F
Sbjct: 194 NAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLF 253
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ ++I W T+++G G A ELF H+ + +P +W+++ISG+++ +
Sbjct: 254 DEML-VKDIHAWTTIVSGYAKWGDMNSASELF----HQMPEKNPVSWSALISGYARNSLG 308
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F KM G+ P +S L ACA ++ALK GK+ HG++IR + + ++L
Sbjct: 309 HEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSL 368
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + F K D WN MIS +NG E A+++F+ M + +KP
Sbjct: 369 IDMYSKCGMLEASCCVFHLMGNK-QDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKP 427
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +LSAC H+G V + L+ F M D G+ P QEH+ C++DLLGR+G EL
Sbjct: 428 DRITFIVILSACSHSGLVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCF---VEL 484
Query: 310 IRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ EL +P V+ +LLG C H N +LG ++A ++ E++P++ +V L+++YA L
Sbjct: 485 VNELENMSCKPDDRVWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFL 544
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE V ++R++++++ + K GIS
Sbjct: 545 GKWESVEKVRELMDEKFIRKERGIS 569
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
F+ ++ CA Y + G+ VH L LK K+ T++ L+ MY +CG A VF +
Sbjct: 65 FVDLLRLCAKAKYFKGGKCVH-LHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDK 123
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ RN+ +WN M+AG G A +LF+ + + D +WN+++ +++ G E
Sbjct: 124 M-SVRNLYSWNHMLAGYAKLGDVNNARKLFDRM----MEKDVVSWNTIVLAYAKQGCFNE 178
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A L+ + M + VL C L L+L K+ HG V+ A + ++++++
Sbjct: 179 AIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQVLVAGFLSNLVLSSSIVD 238
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y KCG+ AR FD+ +K D W ++SGY + G+ SA E+F M ++ N
Sbjct: 239 AYSKCGEMRCARTLFDEMLVK--DIHAWTTIVSGYAKWGDMNSASELFHQMPEK----NP 292
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
S+ A++S +AL FT M FG+ P+Q F
Sbjct: 293 VSWSALISGYARNSLGHEALDYFTKM-MKFGINPEQYTF 330
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 123/245 (50%), Gaps = 11/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF S + ACAS+ L+ G+QVHG ++ + +T++ ++L+DMY KCG L + V
Sbjct: 325 PEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCV 384
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++ WNTMI+ + NG EKAM++F + G KPD T+ ++S S G+
Sbjct: 385 FHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGL 444
Query: 129 RFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E + F+ M G+ P C+ +L L E D+
Sbjct: 445 VQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAGCFVELVNELEN------MSCKPDDR 498
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +AL+ + R+ ++ E+KP A + ++ S Y G++ES ++ +LM
Sbjct: 499 VWSALLGVCRIHNNIELGRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMD 558
Query: 244 QEKVK 248
++ ++
Sbjct: 559 EKFIR 563
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-ATAL 189
EA +++ G+ +L CA K GK H H+ + ++ A L
Sbjct: 45 EALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHL 104
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY +CG+ AR+ FD+ ++ + WN M++GY + G+ +A ++FD M ++ V
Sbjct: 105 IGMYFECGRDVEARKVFDKMSVR--NLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDV-- 160
Query: 250 NSASFVAVLSACGHAGHVDKALQIF 274
S+ ++ A G ++A+ ++
Sbjct: 161 --VSWNTIVLAYAKQGCFNEAIGLY 183
>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1002
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 226/417 (54%), Gaps = 38/417 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT S+++ A ++ G+++HG ++ E SD + + ++DMY KCG + CA VF
Sbjct: 415 DCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVF 474
Query: 70 QELKGSRNILTWNTMIA-----------------------------------GMMLNGRS 94
++I+ WNTM+A G NG+
Sbjct: 475 HFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQV 534
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+A ++F + G P+ TW +MISG +Q G+ +EA ++F++MQ GM P+ +TS
Sbjct: 535 VEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSA 594
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
LSAC +++ L G+ HG+V+R ++ + T++I MY KCG A+ F K
Sbjct: 595 LSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTK-- 652
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ +NAMIS Y +G+ A+ +F + ++ + P+ +F +VLSAC H + + L++F
Sbjct: 653 ELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELF 712
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT-VSVYHSLLGACWCHLN 333
M + +KP ++H+GC+V LL G+LDEA +I +P P + SLL AC +
Sbjct: 713 KYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHE 772
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L +A L ++EP NP +V LSN+YA LG+W++V IR + ++ L K+PG S
Sbjct: 773 TELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCS 829
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 170/384 (44%), Gaps = 49/384 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD--TMIGTALVDMYLKCGCLPCAH 66
P++ + + AC L ++ FGR +HG +K+ + D + T+LVDMY KCG L A
Sbjct: 205 PDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAE 264
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ K + WNSMI G+ Q
Sbjct: 265 KVFDEMPNR----------------------------------KRNDVVWNSMIVGYVQN 290
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
GM EA LFEKM+ G V PS ++ SACA+L A++ GK+ H VI + +
Sbjct: 291 GMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVL 350
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-QQ 244
+++++ Y K G F + D+ WN MIS Y + G +E A+E+ M ++
Sbjct: 351 GSSIMNFYSKVGLIEEVELVFRSMAVLKDEVT-WNLMISSYVQFGMFEKALEMCHWMREE 409
Query: 245 EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
E ++ + + ++L+ V K L F + ++ + ++D+ + G
Sbjct: 410 ENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYS---DMAVLSGVLDMYAKCGI 466
Query: 303 LDEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN- 360
+D AR + + + +++++L AC L E +M+ E+ P V+ N
Sbjct: 467 MDCARGVFHFAGKKKDIVLWNTMLAAC---AEKGLSGEALKLFFQMQMESVPPNVVSWNS 523
Query: 361 IYAGLGRWEDVGRIRQMINDRQLT 384
+ G R V + M ++ QL+
Sbjct: 524 LIFGFFRNGQVVEAQDMFSEMQLS 547
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 148/325 (45%), Gaps = 40/325 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ SACA+L ++ G+Q H L + + + + ++G+++++ Y K G +
Sbjct: 310 EPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVEL 369
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + ++ +TWN MI+ + G EKA+E+ + E
Sbjct: 370 VFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEE------------------N 411
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+RF+ L +S+L+ AD +KLGK+ HG IR + D ++ +
Sbjct: 412 LRFDCVTL----------------SSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLS 455
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ MY KCG AR F F K D WN M++ G A+++F MQ E V
Sbjct: 456 GVLDMYAKCGIMDCARGVF-HFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESV 514
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ +++ G V +A +F+ M G+ P + M+ L ++G EA
Sbjct: 515 PPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLS-GVTPNLITWTTMISGLAQNGLGYEAS 573
Query: 308 ELIRELP----EPTVSVYHSLLGAC 328
+ +++ P S L AC
Sbjct: 574 RVFQQMQGAGMRPNSISITSALSAC 598
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 143/301 (47%), Gaps = 36/301 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS++ S +SAC ++ L +GR +HG ++ I T+++DMY KCG L A V
Sbjct: 586 PNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFV 645
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ + +N MI+ +G+S +A+ LF+ L +G PD T+ S++S S +
Sbjct: 646 FI-ICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRL 704
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
E +LF+ M M PS K C+ +L+ L AL++ ++ D
Sbjct: 705 LKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRI-------ILTMPSPPD- 756
Query: 184 SMATALISMYMKCGQ------PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
A L S+ CGQ ++ ++ +++P++P + A+ + Y G+++
Sbjct: 757 --AHILGSLLAACGQNHETELANYIAKWL--LKVEPNNPGNYVALSNVYAALGKWDEVSN 812
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
I M+++ +K + C V + L +F D P++E ++DLL
Sbjct: 813 IRGFMKEKGLKK--------IPGCSWI-EVGQELNVFIASDKS---HPEKEEIYKILDLL 860
Query: 298 G 298
G
Sbjct: 861 G 861
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 40/261 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDT--MIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G Q+H +K T + + LV +Y KC A + F+ +
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVK 168
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
++N+ ++ ++ L R+ G+ EA
Sbjct: 169 NQNLFSYAAIVG---LQARN--------------------------------GLYKEALL 193
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--DLNKDESMATALISM 192
+ +M G P V + L AC L + G+ HG V++ + + +AT+L+ M
Sbjct: 194 SYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDM 253
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNS 251
Y KCG A + FD+ + + WN+MI GY +NG AV +F+ M+ E V+P+
Sbjct: 254 YGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSE 313
Query: 252 ASFVAVLSACGHAGHVDKALQ 272
S SAC + V++ Q
Sbjct: 314 VSLSGFFSACANLEAVEEGKQ 334
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 154 VLSACADLSALKLGKETHGHVIR--ADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+L C L LG + H H+I+ + + +E + + L+ +Y KC A FF +
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRNV-V 167
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
K + + A++ RNG Y+ A+ + M ++ P++ L ACG +
Sbjct: 168 KNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIG--- 224
Query: 272 QIFTMMDDDFGLKPKQEHFGC------MVDLLGRSGRLDEARELIRELP 314
F F +K E GC +VD+ G+ G L++A ++ E+P
Sbjct: 225 --FGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMP 271
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 212/382 (55%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++VT + V+ AC SL + + + D +G L+DMY + G + A VF
Sbjct: 177 DAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVF 236
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ RN+++WN MI G G A ELF+ ++ D +W +MI+ +SQ G
Sbjct: 237 DQMQW-RNLVSWNAMIMGYGKAGNLVAARELFDAMSQR----DVISWTNMITSYSQAGQF 291
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +LF++M + + P V SVLSACA +L +G+ H ++ + D+ D + AL
Sbjct: 292 TEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNAL 351
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A F E++ D W ++ISG NG +SA++ F M +E V+P
Sbjct: 352 IDMYCKCGVVEKALEVFK--EMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQP 409
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +FV +L AC HAG VDK L+ F M+ +GLKP+ +H+GC+VDLL RSG L A E
Sbjct: 410 SHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEF 469
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I+E+P P V ++ LL A H N L E KL E++P N +V+ SN YAG RW
Sbjct: 470 IKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRW 529
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
ED ++R+++ + K G S
Sbjct: 530 EDAVKMRELMEKSNVQKPSGSS 551
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 145/316 (45%), Gaps = 8/316 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N++T++ + ACA + + G +H LK+ +S + AL++MY CG L A VF
Sbjct: 76 NNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVF 135
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ R++++WN+++ G R + + +FE + G K D T ++ + LG
Sbjct: 136 DEMP-ERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEW 194
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A + + ++ + + +++ + L + + +L A+
Sbjct: 195 GVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVS----WNAM 250
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I Y K G AR FD + D W MI+ Y + G++ A+ +F M + KVKP
Sbjct: 251 IMGYGKAGNLVAARELFDAMSQR--DVISWTNMITSYSQAGQFTEALRLFKEMMESKVKP 308
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +VLSAC H G +D + + +K ++D+ + G +++A E+
Sbjct: 309 DEITVASVLSACAHTGSLDVGEAAHDYI-QKYDVKADIYVGNALIDMYCKCGVVEKALEV 367
Query: 310 IRELPEPTVSVYHSLL 325
+E+ + + S++
Sbjct: 368 FKEMRKKDSVSWTSII 383
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 129/263 (49%), Gaps = 15/263 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T SV+SACA L G H K + ++D +G AL+DMY KCG + A
Sbjct: 307 KPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALE 366
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E++ ++ ++W ++I+G+ +NG ++ A++ F + E +P + ++ + G
Sbjct: 367 VFKEMR-KKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAG 425
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ + + FE M+ G+ P +K CV +LS +L A + KE + D
Sbjct: 426 LVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEM-------PVTPD 478
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ L+S G A + E+ P + + + Y + +E AV++ +L
Sbjct: 479 VVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMREL 538
Query: 242 MQQEKV-KPNSASFVAVLSACGH 263
M++ V KP+ +S + + GH
Sbjct: 539 MEKSNVQKPSGSSCIEMELQNGH 561
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 7/218 (3%)
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
KA LF+ + +P WN MI G+S EA +++ M G++ + +
Sbjct: 29 KAHNLFQQI----HRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFLF 84
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
ACA + + G H V++ ++ ALI+MY CG A++ FD E+ D
Sbjct: 85 KACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFD--EMPERD 142
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+++ GYG+ + + +F+ M+ VK ++ + V V+ AC G A +
Sbjct: 143 LVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVD 202
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
++++ ++ ++D+ GR G + AR + ++
Sbjct: 203 YIEEN-NVEIDVYLGNTLIDMYGRRGLVHLARGVFDQM 239
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/383 (37%), Positives = 210/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SV+ +CAS+ LQ G+QVH LK+ + + AL+D+Y KCG
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCG-------- 292
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R + +M+LF L + + TWN+MI G+ Q G
Sbjct: 293 ------------------------RLDNSMKLFMELPNR----NEVTWNTMIVGYVQSGD 324
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A L++ M + S +SVL ACA L+A++LG + H ++ +KD + A
Sbjct: 325 GDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNA 384
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD + D WNAMISGY +G A++ F +MQ+ +
Sbjct: 385 LIDMYAKCGSIKNARLVFDM--LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECV 442
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV++LSAC +AG +D F M D+G++P EH+ CMV LLGRSG LD+A +
Sbjct: 443 PNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVK 502
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI E+P EP V V+ +LLGAC H + DLG A ++ +++P++ V+LSNIYA R
Sbjct: 503 LIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRR 562
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W V +R+ + ++ + K PG+S
Sbjct: 563 WNSVASVRKFMKNKGVKKEPGLS 585
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 157/358 (43%), Gaps = 51/358 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V+ AC L G+ VHG LK + D +G L+D+Y K G V
Sbjct: 140 PNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRV 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ K D W+ MIS ++Q
Sbjct: 200 FEEMP------------------------------------KHDVIPWSFMISRYAQSNQ 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +M+ ++P+ SVL +CA + L+LGK+ H HV++ L+ + ++ A
Sbjct: 224 SREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y KCG+ + + F E+ + WN MI GY ++G+ + A+ ++ M + +V+
Sbjct: 284 LMDVYAKCGRLDNSMKLF--MELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQ 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ ++ +VL AC ++ QI T+ D D + ++D+ + G +
Sbjct: 342 ASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVG------NALIDMYAKCGSI 395
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
AR + L E +++++ H + L M+ E P T ILS
Sbjct: 396 KNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILS 453
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N F +++ S+ + +H K+ +S+ +GTAL+D Y CG + A
Sbjct: 38 ELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQ 97
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + +++++W M+A N R +
Sbjct: 98 AFDAI-ACKDMVSWTGMVACYAENDRFQ-------------------------------- 124
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ +LF +M+ G P+ VL AC L A +GK HG V++ D +
Sbjct: 125 ---DSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGV 181
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ +Y K G + R F+ E+ D W+ MIS Y ++ + AVE+F M++ V
Sbjct: 182 GLLDLYTKFGDANDVLRVFE--EMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F +VL +C ++ Q+ + GL ++D+ + GRLD +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHV-LKVGLDGNVFVSNALMDVYAKCGRLDNSM 298
Query: 308 ELIRELPEPTVSVYHSLL 325
+L ELP +++++
Sbjct: 299 KLFMELPNRNEVTWNTMI 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 21/257 (8%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M EC + + VT+ SV+ ACASL ++ G Q+H L+LK D ++G AL+DMY KCG
Sbjct: 335 MLEC-QVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCG 393
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF L R+ ++WN MI+G ++G +A++ F+ + P+ T+ S++
Sbjct: 394 SIKNARLVFDML-SERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSIL 452
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADL-SALKLGKET----H 171
S S G+ F+ M Q G+ P ++ C+ +L L A+KL +E +
Sbjct: 453 SACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPN 512
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
V RA L +I + G S A++ +I P D A + + Y R
Sbjct: 513 VKVWRALL------GACVIHNDVDLGIMS-AQQI---LQIDPQDEATHVLLSNIYARTRR 562
Query: 232 YESAVEIFDLMQQEKVK 248
+ S + M+ + VK
Sbjct: 563 WNSVASVRKFMKNKGVK 579
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 107/249 (42%), Gaps = 50/249 (20%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN +++ T+I G + + + ++ ++LF + EG + +P + +++ KL
Sbjct: 4 RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTIL-------------KL 50
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
++ + SL AC KLG E++ V TALI Y
Sbjct: 51 LVSVECAELAYSLH-------AC----IYKLGHESNAFV-----------GTALIDAYAV 88
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG + AR+ FD K D W M++ Y N ++ ++++F M+ PN +F
Sbjct: 89 CGSVNSARQAFDAIACK--DMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFA 146
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFG--LKPKQE---HFGC-MVDLLGRSGRLDEAREL 309
VL AC L+ F++ G LK E + G ++DL + G ++ +
Sbjct: 147 GVLKAC-------IGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRV 199
Query: 310 IRELPEPTV 318
E+P+ V
Sbjct: 200 FEEMPKHDV 208
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 218/388 (56%), Gaps = 15/388 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK---QSDTMIGTALVDMYLKCGCLPCAH 66
++VT + V+ AC L ++G V + IE+ + D +G L+DMY + + A
Sbjct: 895 DAVTMVKVVLACTVLG--EWG-VVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLAR 951
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ RN+++WN MI G G A +LF+ + H D +W SMIS +SQ
Sbjct: 952 RVFDRMR-DRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHR----DVISWTSMISSYSQA 1006
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A +LF++M T + P V SVLSACA + AL +G+ H ++ + D+N D +
Sbjct: 1007 GQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVG 1066
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG F+ E+ D W ++I+G NG +SA+ +F LM +E
Sbjct: 1067 NALIDMYCKCGAVEKGLSVFE--EMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREG 1124
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+P +FV VL AC HAG VDK L+ F M+ +GL P+ +H+GC+VDLL RSG L A
Sbjct: 1125 VRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRA 1184
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E I+ +P +P V V+ LL A H N L E KL E +P N +++ SN YAG
Sbjct: 1185 YEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGS 1244
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISAGI 393
RWEDV ++R+++ + + K P S+ +
Sbjct: 1245 NRWEDVIKMRRLMEESNVHK-PSASSSV 1271
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 128/256 (50%), Gaps = 13/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T SV+SACA + L G VH K + +D +G AL+DMY KCG + +
Sbjct: 1025 KPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLS 1084
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ G R+ ++W ++IAG+ +NG ++ A+ LF + EG +P T+ ++ + G
Sbjct: 1085 VFEEM-GKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAG 1143
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + + FE M+ G+ P +K CV +LS +L + + R ++ D
Sbjct: 1144 VVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLG------RAYEFIKRMPMDPDV 1197
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L+S G A + E P + + + Y + +E +++ LM
Sbjct: 1198 VVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLM 1257
Query: 243 QQEKV-KPNSASFVAV 257
++ V KP+++S V +
Sbjct: 1258 EESNVHKPSASSSVEI 1273
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N++T+ ++ ACA + + VH LK+ SD + AL+ Y L A VF
Sbjct: 795 NNLTYPFLLKACARISNVSCT-TVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVF 853
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ R++++WN++I G R + + +FE + K D T ++ + LG
Sbjct: 854 DEM-SERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEW 912
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT-- 187
+ E ++ + + +++ S + L + D +D +M +
Sbjct: 913 GVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVF------DRMRDRNMVSWN 966
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I Y K G AR+ FD ++ D W +MIS Y + G++ AV +F M KV
Sbjct: 967 AMIMGYGKAGNLVAARKLFD--DMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV 1024
Query: 248 KPNSASFVAVLSACGHAGHVD 268
KP+ + +VLSAC H G +D
Sbjct: 1025 KPDEITVASVLSACAHIGALD 1045
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 19/270 (7%)
Query: 62 LPCA-HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L C+ N+ +EL + I +N + + + KA ELF + +P + WN MI
Sbjct: 713 LSCSFSNMIKELLPTDPISIFNLLKSYALSPTNILKANELFRQIP----RPTLSHWNIMI 768
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+SQ EA + + M S + + +L ACA +S + H V++ +
Sbjct: 769 RGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVSC-TTVHARVLKLGFD 827
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ ALI Y + +AR+ FD E+ D WN++I GYGR Y + +F+
Sbjct: 828 SDLFVSNALIHGYAGFCELGFARKVFD--EMSERDLVSWNSLICGYGRCRRYSEVLVVFE 885
Query: 241 LMQQEKVKPNSASFVAVLSAC---GHAGHVDKALQIF--TMMDDDFGLKPKQEHFGCMVD 295
M+ VK ++ + V V+ AC G G VD ++ ++ D L ++D
Sbjct: 886 EMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLG------NTLID 939
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ GR +D AR + + + + +++++
Sbjct: 940 MYGRRSMVDLARRVFDRMRDRNMVSWNAMI 969
>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 658
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/397 (35%), Positives = 219/397 (55%), Gaps = 14/397 (3%)
Query: 1 MKECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL 57
M C+ E P S TF +++ AC S+ L GRQ H T ++ +G ++DMY+
Sbjct: 137 MYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYV 196
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
KCG + CA VF E+ R++++W +IA G E A +LFE L + D W
Sbjct: 197 KCGSIVCARKVFDEMP-ERDVISWTELIAAYARVGNMESAADLFESLPTK----DMVAWT 251
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+M++GF+Q EA + F++M+ +G+ V +SACA L A K ++
Sbjct: 252 AMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS 311
Query: 178 DLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + +ALI MY KCG A F K + +++MI G +G + A
Sbjct: 312 GYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK--NVFSYSSMILGLATHGRAQEA 369
Query: 236 VEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+++F M Q +KPN+ +FV L+AC H+G VD+ Q+F M FG++P ++H+ CMV
Sbjct: 370 LDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMV 429
Query: 295 DLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
DLLGR+GRL EA ELI+ + EP V+ +LLGAC H N D+ E A L E+EP+
Sbjct: 430 DLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPDIAEIAAEHLFELEPDIIG 489
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+++LSN+Y+ G W V +R++I ++ L K P +S
Sbjct: 490 NYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAVS 526
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 40/255 (15%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+P W ++I G++ G EA ++ M+ + P +++L AC + L LG++ H
Sbjct: 114 NPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNLGRQFH 173
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ----------------------- 208
R + +I MY+KCG AR+ FD+
Sbjct: 174 AQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNME 233
Query: 209 -----FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
FE P D W AM++G+ +N + + A+E FD M++ ++ + + +SAC
Sbjct: 234 SAADLFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 293
Query: 263 HAG---HVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEP 316
G + D+A+QI G P +H ++D+ + G ++EA + +
Sbjct: 294 QLGASKYADRAVQI----AQKSGYSP-SDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNK 348
Query: 317 TVSVYHSLLGACWCH 331
V Y S++ H
Sbjct: 349 NVFSYSSMILGLATH 363
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 9/181 (4%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP--SWARRFFDQ 208
V+S++S D L K+ HGHV+R L++ + T LI K G P + RR +
Sbjct: 50 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIEP 109
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ + +P W A+I GY G+++ A+ ++ M++E++ P S +F A+L ACG G ++
Sbjct: 110 VQFR--NPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLN 167
Query: 269 KALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
Q F L+ + M+D+ + G + AR++ E+PE V + L+
Sbjct: 168 LGRQFHA---QTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIA 224
Query: 327 A 327
A
Sbjct: 225 A 225
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 222/379 (58%), Gaps = 8/379 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+S L G+ +HG +K ++ + +L+ +Y K G + A +F E+K ++
Sbjct: 1115 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK-TK 1173
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLA----HEGFKPDPATWNSMISGFSQLGMRFEA 132
NI++WN +I+ G ++A +F L + +P+ +W+++I GF+ G EA
Sbjct: 1174 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 1233
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ + + + SVLS CA+L+AL LG+E HGHV+R+ ++ + + LI+M
Sbjct: 1234 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 1293
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y K G F++ E K D WN M++GYG +G E+A+ FD M ++ +P+
Sbjct: 1294 YTKSGSFKEGNLVFEKIENK--DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 1351
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FVAVLSAC HAG V + ++F M +F ++P+ EH+ CMVDLLGR+G L EA ++++
Sbjct: 1352 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 1411
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP V+ +LL +C H N+++ EE A ++ + E +++LSNIYA GRWED
Sbjct: 1412 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 1471
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R + L K PG S
Sbjct: 1472 AKVRISAKTKGLKKTPGQS 1490
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 140/271 (51%), Gaps = 11/271 (4%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF VI ACA + + R VHG +++ Q + +G L+ MY K G + A VF+ +
Sbjct: 975 TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 1034
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++WNTM++G LN A E+F + G +P+ TW S++S ++ G E
Sbjct: 1035 -AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVET 1093
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M+ G+ + + + VLS DL+A GK HG+V++ + +LI +
Sbjct: 1094 MELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICL 1153
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK------ 246
Y K G + AR F EIK + WNA+IS Y G + A IF +Q EK
Sbjct: 1154 YGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIF--LQLEKTDEYPM 1209
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
V+PN S+ AV+ G ++AL++F M
Sbjct: 1210 VRPNVVSWSAVIGGFASKGQGEEALELFRRM 1240
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ NSVT SV+S CA L L GR++HG ++ + ++G L++MY K G +
Sbjct: 1246 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 1305
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ ++++++WNTM+AG ++G E A+ F+ + +GF+PD T+ +++S S G
Sbjct: 1306 VFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 1364
Query: 128 MRFEAFKLFEKM 139
+ E +LF+KM
Sbjct: 1365 LVAEGRELFDKM 1376
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 28 QFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ--ELKGSRNILTWNTMI 85
+Q+H + + +V +Y G + A VF+ ++ N+L WN+++
Sbjct: 886 HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSIL 945
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
+ +G E+A+E++ + G D GF+ F L
Sbjct: 946 RANVAHGYCEEALEIYCRMRKLGVSAD---------GFT--------FPL---------- 978
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
V+ ACA + + KL + HGHV+ + + L+ MY K G+ AR+
Sbjct: 979 --------VIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKV 1030
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
F++ ++ WN M+SGY N + A E+F +M ++PN ++ ++LS+ G
Sbjct: 1031 FERMAVR--SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 1088
Query: 266 HVDKALQIFTMM 277
+ +++F M
Sbjct: 1089 QHVETMELFGRM 1100
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 16/119 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
EP+ VTF++V+SAC+ + GR++ +K +E Q + +VD+ + G L
Sbjct: 1347 EPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHY--ACMVDLLGRAGLLQE 1404
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNG-RSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A V + + N W G +LN R K E+ E A + F NS I+G
Sbjct: 1405 ASKVVKSMPVEPNACVW-----GALLNSCRMHKNTEVAEETASQIF-----NLNSEIAG 1453
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 219/384 (57%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ AC L + G+ +HGL K+ S+ + ++++Y CG + A +
Sbjct: 8 PDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLL 67
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ R+ +TWN +IA + G + A F + ++ + +W SMISGF Q G
Sbjct: 68 FEKMP-QRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVR----SWTSMISGFVQCGK 122
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF K++ + P+ V SVL+ACADL L LG+ H + ++ ++ +
Sbjct: 123 PNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNT 182
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG ARR F +E++ W+AMI+G +G+ E A+ +F M + VK
Sbjct: 183 LIDMYVKCGCLENARRVF--YEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +L AC H G +D+ + F M D+G+ P+ EH+GC+VDL R+G L+EA E
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P +P V+ +LLG C H N DL EE L E++P N +V++SNIYA R
Sbjct: 301 FILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAER 360
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WED R+R+++ DR + K G S+
Sbjct: 361 WEDAARVRKLMKDRGVKKTSGWSS 384
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 30/222 (13%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M+ ++P + VL AC LS + GK HG + + + ++++Y CG+
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 199 PSWARRFFD---------------QFEIKPD-DPAF-------------WNAMISGYGRN 229
A F+ Q + D D A+ W +MISG+ +
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G+ A+++F ++ E V+PN + V+VL+AC G +D +I G K
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLG-RIVHEYSTKSGFKRNVHV 179
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++D+ + G L+ AR + E+ E TV + +++ H
Sbjct: 180 CNTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMH 221
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 213/382 (55%), Gaps = 13/382 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ ++ AC L+ G+QVH ++ S ++ +L++MY + G L AH VF E+
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRF 130
+ R++++WN +I+ G+ KA LF + PD TW +M+SG++ +G
Sbjct: 181 R-ERDVVSWNMLISAHARLGQMRKATALFNSM------PDKTIVTWTAMVSGYTTVGDYP 233
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A F MQ+ G P + +VL ACA L AL+LG+ + + R + + AL+
Sbjct: 234 GAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALM 293
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKP 249
MY KCG A + FD K D W+ +I G +G AV +F M++E KV+P
Sbjct: 294 EMYAKCGCIDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRP 351
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV +LSAC +AG VD+ L F M+D +G++P EH+GC+VDLLGRSG++ A +L
Sbjct: 352 NVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDL 411
Query: 310 IRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P P V+ SLL AC H + D A +L E+EP++ V+L+N+YA RW
Sbjct: 412 VRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRW 471
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV R+ I R + K PG S
Sbjct: 472 SDVASTRKAIRSRSMRKTPGCS 493
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ ++V+ ACA L L+ GR ++ + + T I AL++MY KCGC+ A
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
+F + +++++W+T+I G+ +GR+ +A+ LF + EG +P+ T+ ++S S
Sbjct: 308 LFDGM-ADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYA 366
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
G+ E F++M G+ P ++ CV +L
Sbjct: 367 GLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V + L AC L HGHV+R +++ +AT ++ + + + A R F Q
Sbjct: 17 VMARLRACVTFRDLL---RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQ-- 71
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-------NSASFVAVLSACGH 263
++ + NAMI Y +N ++ AV ++ M + P + ++ +L ACG
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGG 131
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
++ Q+ T + G ++++ R+G L A ++ E+ E V ++
Sbjct: 132 TAALELGKQVHTHVVRS-GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 324 LLGA 327
L+ A
Sbjct: 191 LISA 194
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T SV+SACA+L ++ G+QVH L+ E ++ + AL+ Y K G + A +
Sbjct: 295 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 354
Query: 69 F-QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
Q ++ N++++ ++ G + G E A E+F + + D W +MI G+ Q G
Sbjct: 355 MDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNG 410
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF M + G P+ + +VLS CA L+ L GK+ H IR+ L + S++
Sbjct: 411 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSN 470
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I+MY + G WARR FDQ + + W +MI ++G+ E AV +F+ M + V
Sbjct: 471 AIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGV 529
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ ++V VLSAC HAG V++ + + + ++ + P+ H+ CMVDLL R+G EA+
Sbjct: 530 EPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQ 589
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P EP + SLL AC H N++L E A KL ++P N + ++N+Y+ G
Sbjct: 590 EFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACG 649
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D RI + ++ + K G S
Sbjct: 650 RWSDAARIWKARKEKAVRKETGFS 673
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/390 (28%), Positives = 181/390 (46%), Gaps = 49/390 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T +V+S+CA GR+VH +K+ S + ++++MY KCG A V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + R++ +WN M++ GR + A LFE + +WN+MI+G++Q G+
Sbjct: 222 FERMP-VRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSI----VSWNAMIAGYNQNGL 276
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A KLF +M + M P +TSVLSACA+L +++GK+ H +++R ++ + +
Sbjct: 277 DAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN 336
Query: 188 ALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD-DP 216
ALIS Y K G ARR DQ F + + D
Sbjct: 337 ALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY +NG + A+++F M +PNS + AVLS C +D QI
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWCHLNS 334
L+ ++ + RSG AR + ++ + T++ + S++ A H
Sbjct: 457 AIRSL-LERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQH--- 511
Query: 335 DLGEEMAMKLQEM-----EPENPTPFVILS 359
GEE +EM EP+ T +LS
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 42/327 (12%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLK----CGCLPCAHNVFQELK-GSRNILTWNTM 84
GR +H +K + + L+ Y + G L A +F E+ RN+ TWN++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
++ +GR A +F + D +W M+ G ++ G EA K M + G
Sbjct: 105 LSMFAKSGRLADARGVFAEMPER----DAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
P+ +T+VLS+CA A +G++ H V++ L +A ++++MY KCG A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETAST 220
Query: 205 FFDQ----------------------------FEIKPDDPAF-WNAMISGYGRNGEYESA 235
F++ FE P WNAMI+GY +NG A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKA 280
Query: 236 VEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCM 293
+++F M E + P+ + +VLSAC + G+V Q+ ++ + + + +
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--AL 338
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSV 320
+ +SG ++ AR ++ + E ++V
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNV 365
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS T +V+S CASL L +G+Q+H ++ + + + A++ MY + G P A
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARR 487
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + +TW +MI + +G+ E+A+ LFE + G +PD T+ ++S S G
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E + ++++++ + P + C+ +L+ L E + R + D
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG------LFSEAQEFIRRMPVEPDA 601
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+S A ++ I P++ ++A+ + Y G + A I+
Sbjct: 602 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 661
Query: 243 QQEKVKPNS 251
+++ V+ +
Sbjct: 662 KEKAVRKET 670
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 213/382 (55%), Gaps = 13/382 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ ++ AC L+ G+QVH ++ S ++ +L++MY + G L AH VF E+
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRF 130
+ R++++WN +I+ G+ KA LF + PD TW +M+SG++ +G
Sbjct: 181 R-ERDVVSWNMLISAHARLGQMRKATALFNSM------PDKTIVTWTAMVSGYTTVGDYP 233
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A F MQ+ G P + +VL ACA L AL+LG+ + + R + + AL+
Sbjct: 234 GAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALM 293
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKP 249
MY KCG A + FD K D W+ +I G +G AV +F M++E KV+P
Sbjct: 294 EMYAKCGCIDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRP 351
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV +LSAC +AG VD+ L F M+D +G++P EH+GC+VDLLGRSG++ A +L
Sbjct: 352 NVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDL 411
Query: 310 IRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P P V+ SLL AC H + D A +L E+EP++ V+L+N+YA RW
Sbjct: 412 VRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRW 471
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV R+ I R + K PG S
Sbjct: 472 SDVASTRKAIRSRSMRKTPGCS 493
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ ++V+ ACA L L+ GR ++ + + T I AL++MY KCGC+ A
Sbjct: 248 EPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
+F + +++++W+T+I G+ +GR+ +A+ LF + EG +P+ T+ ++S S
Sbjct: 308 LFDGM-ADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYA 366
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
G+ E F++M G+ P ++ CV +L
Sbjct: 367 GLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V + L AC L HGHV+R +++ +AT ++ + + + A R F Q
Sbjct: 17 VMARLRACVTFRDLL---RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQ-- 71
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-------NSASFVAVLSACGH 263
++ + NAMI Y +N ++ AV ++ M + P + ++ +L ACG
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGG 131
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
++ Q+ T + G ++++ R+G L A ++ E+ E V ++
Sbjct: 132 TAALELGKQVHTHVVRS-GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 324 LLGA 327
L+ A
Sbjct: 191 LISA 194
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 211/383 (55%), Gaps = 12/383 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF+S++ AC+S+ L GR VH L+ S+ + TALV+MY KCG L A VF +
Sbjct: 310 TFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAM 369
Query: 73 KGSRNILTWNTMIAGMMLNGR---SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
K +R+ + W+T+I NG + KA ++F+ L D +WN+MI+ + Q G
Sbjct: 370 K-NRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSR----DTISWNAMITTYVQNGCA 424
Query: 130 FEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A K+F +M + G+ P +VL ACA L L K H + ++L + +
Sbjct: 425 VAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNT 484
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY +CG A R F K W AM++ + + G Y A+++F M E VK
Sbjct: 485 LINMYARCGSLEEAERLFAA--AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ ++ ++L C H G +++ + FT M + L P +HF MVDLLGRSGRL +A+E
Sbjct: 543 PDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKE 602
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ +P EP + + L AC H +LGE A ++ E++P + P++ +SNIYA G
Sbjct: 603 LLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGM 662
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +R+ + +R L KLPG+S
Sbjct: 663 WEKVASVRKKMEERGLKKLPGLS 685
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 175/383 (45%), Gaps = 66/383 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++VTF++V+ +C+S + GR +H + DTM+G AL+ MY KC L A +
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 68 VFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW---------- 116
VF+ + RN+++WN MIA NG S +A+ L+ + +G D T+
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 117 ----------------------NSMISGFSQLGMRFEAFKLFEKMQSTG----------- 143
N++++ +++ G +A ++F+ +Q+
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAH 183
Query: 144 -----------MVPSLKC--------VTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +KC +V+S + L G++ H ++ + D
Sbjct: 184 SQSGDWSGALRIFKEMKCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLV 243
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ATALI+MY KCG AR FD+ +K D WN MI Y NG++ A+E++ +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDK--MKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDM 301
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E K A+FV++L AC + + + + + + GL + +V++ + G L+
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILER-GLDSEVAVATALVNMYAKCGSLE 360
Query: 305 EARELIRELPEPTVSVYHSLLGA 327
EAR++ + + +L+GA
Sbjct: 361 EARKVFNAMKNRDAVAWSTLIGA 383
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 169/386 (43%), Gaps = 72/386 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T+I+VIS ++ L GR++H + +D ++ TAL++MY KCG A
Sbjct: 204 KPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEARE 263
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++K K D +WN MI + G
Sbjct: 264 VFDKMK------------------------------------KRDMVSWNVMIGCYVLNG 287
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +L++K+ G + S+L AC+ + AL G+ H H++ L+ + ++AT
Sbjct: 288 DFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVAT 347
Query: 188 ALISMYMKCGQPSWARRFFDQFE--------------------------------IKPDD 215
AL++MY KCG AR+ F+ + + D
Sbjct: 348 ALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRD 407
Query: 216 PAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
WNAMI+ Y +NG +A++IF ++ +KP++ +F+AVL AC G + + +
Sbjct: 408 TISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALH 467
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC--WCHL 332
+ + L+ ++++ R G L+EA L E TV + +++ A +
Sbjct: 468 AQISES-ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRY 526
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVIL 358
L M L+ ++P++ T IL
Sbjct: 527 AEALDLFQEMDLEGVKPDDVTYTSIL 552
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++VTFI+V+ ACASL L + +H + E +S+ ++ L++MY +CG L A
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAER 500
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F K + +++W M+A GR +A++LF+ + EG KPD T+ S++ + G
Sbjct: 501 LFAAAK-EKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGG 559
Query: 128 MRFEAFKLFEKM 139
+ ++ F M
Sbjct: 560 SLEQGWRYFTDM 571
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T SV+SACA+L ++ G+QVH L+ E ++ + AL+ Y K G + A +
Sbjct: 189 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 248
Query: 69 F-QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
Q ++ N++++ ++ G + G E A E+F + + D W +MI G+ Q G
Sbjct: 249 MDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNG 304
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF M + G P+ + +VLS CA L+ L GK+ H IR+ L + S++
Sbjct: 305 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN 364
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I+MY + G WARR FDQ + + W +MI ++G+ E AV +F+ M + V
Sbjct: 365 AIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGV 423
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ ++V VLSAC HAG V++ + + + ++ + P+ H+ CMVDLL R+G EA+
Sbjct: 424 EPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQ 483
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P EP + SLL AC H N++L E A KL ++P N + ++N+Y+ G
Sbjct: 484 EFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACG 543
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D RI + ++ + K G S
Sbjct: 544 RWSDAARIWKARKEKAVRKETGFS 567
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 53/392 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T +V+S+CA GR+VH +K+ S + ++++MY KCG A V
Sbjct: 56 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 115
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGFSQL 126
F+ + R++ +WN M++ GR + A LFE + PD + +WN+MI+G++Q
Sbjct: 116 FERMP-VRSVSSWNAMVSLNTHLGRMDLAESLFESM------PDRSIVSWNAMIAGYNQN 168
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A KLF +M + M P +TSVLSACA+L +++GK+ H +++R ++ + +
Sbjct: 169 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 228
Query: 186 ATALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD- 214
ALIS Y K G ARR DQ F + +
Sbjct: 229 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 288
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W AMI GY +NG + A+++F M +PNS + AVLS C +D QI
Sbjct: 289 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 348
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWCHL 332
L+ ++ + RSG AR + ++ + T++ + S++ A H
Sbjct: 349 CRAIRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQH- 405
Query: 333 NSDLGEEMAMKLQEM-----EPENPTPFVILS 359
GEE +EM EP+ T +LS
Sbjct: 406 --GQGEEAVGLFEEMLRAGVEPDRITYVGVLS 435
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS T +V+S CASL L +G+Q+H ++ + + + A++ MY + G P A
Sbjct: 322 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 381
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + +TW +MI + +G+ E+A+ LFE + G +PD T+ ++S S G
Sbjct: 382 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 441
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E + ++++++ + P + C+ +L+ L E + R + D
Sbjct: 442 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG------LFSEAQEFIRRMPVEPDA 495
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+S A ++ I P++ ++A+ + Y G + A I+
Sbjct: 496 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 555
Query: 243 QQEKVKPNS 251
+++ V+ +
Sbjct: 556 KEKAVRKET 564
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 33/250 (13%)
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
G+ E + D +W M+ G ++ G EA K M + G P+ +T+VLS+CA
Sbjct: 12 RGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVT 71
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ------------- 208
A +G++ H V++ L +A ++++MY KCG A F++
Sbjct: 72 QAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMV 131
Query: 209 ---------------FEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNS 251
FE PD WNAMI+GY +NG A+++F M E + P+
Sbjct: 132 SLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDE 191
Query: 252 ASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ +VLSAC + G+V Q+ ++ + + + ++ +SG ++ AR ++
Sbjct: 192 FTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--ALISTYAKSGSVENARRIM 249
Query: 311 RELPEPTVSV 320
+ E ++V
Sbjct: 250 DQSMETDLNV 259
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T SV+SACA+L ++ G+QVH L+ E ++ + AL+ Y K G + A +
Sbjct: 295 PDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRI 354
Query: 69 F-QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
Q ++ N++++ ++ G + G E A E+F + + D W +MI G+ Q G
Sbjct: 355 MDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR----DVVAWTAMIVGYEQNG 410
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF M + G P+ + +VLS CA L+ L GK+ H IR+ L + S++
Sbjct: 411 RNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSN 470
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I+MY + G WARR FDQ + + W +MI ++G+ E AV +F+ M + V
Sbjct: 471 AIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLRAGV 529
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ ++V VLSAC HAG V++ + + + ++ + P+ H+ CMVDLL R+G EA+
Sbjct: 530 EPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQ 589
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P EP + SLL AC H N++L E A KL ++P N + ++N+Y+ G
Sbjct: 590 EFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACG 649
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D RI + ++ + K G S
Sbjct: 650 RWSDAARIWKARKEKAVRKETGFS 673
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 184/392 (46%), Gaps = 53/392 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T +V+S+CA GR+VH +K+ S + ++++MY KCG A V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGFSQL 126
F+ + R++ +WN M++ GR + A LFE + PD + +WN+MI+G++Q
Sbjct: 222 FERMP-VRSVSSWNAMVSLNTHLGRMDLAESLFESM------PDRSIVSWNAMIAGYNQN 274
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A KLF +M + M P +TSVLSACA+L +++GK+ H +++R ++ + +
Sbjct: 275 GLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQV 334
Query: 186 ATALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD- 214
ALIS Y K G ARR DQ F + +
Sbjct: 335 TNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNR 394
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W AMI GY +NG + A+++F M +PNS + AVLS C +D QI
Sbjct: 395 DVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIH 454
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWCHL 332
L+ ++ + RSG AR + ++ + T++ + S++ A H
Sbjct: 455 CRAIRSL-LEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQH- 511
Query: 333 NSDLGEEMAMKLQEM-----EPENPTPFVILS 359
GEE +EM EP+ T +LS
Sbjct: 512 --GQGEEAVGLFEEMLRAGVEPDRITYVGVLS 541
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLK----CGCLPCAHNVFQELK-GSRNILTWNTM 84
GR +H +K + + L+ Y + G L A +F E+ RN+ TWN++
Sbjct: 45 GRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIPLARRNVFTWNSL 104
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
++ +GR A +F + D +W M+ G ++ G EA K M + G
Sbjct: 105 LSMFAKSGRLADARGVFAEMPER----DAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGF 160
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
P+ +T+VLS+CA A +G++ H V++ L +A ++++MY KCG A
Sbjct: 161 TPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATT 220
Query: 205 FFDQ----------------------------FEIKPDDPAF-WNAMISGYGRNGEYESA 235
F++ FE PD WNAMI+GY +NG A
Sbjct: 221 VFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKA 280
Query: 236 VEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCM 293
+++F M E + P+ + +VLSAC + G+V Q+ ++ + + + +
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTN--AL 338
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSV 320
+ +SG ++ AR ++ + E ++V
Sbjct: 339 ISTYAKSGSVENARRIMDQSMETDLNV 365
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS T +V+S CASL L +G+Q+H ++ + + + A++ MY + G P A
Sbjct: 428 EPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARR 487
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ + +TW +MI + +G+ E+A+ LFE + G +PD T+ ++S S G
Sbjct: 488 MFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAG 547
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E + ++++++ + P + C+ +L+ L E + R + D
Sbjct: 548 FVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG------LFSEAQEFIRRMPVEPDA 601
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+S A ++ I P++ ++A+ + Y G + A I+
Sbjct: 602 IAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKAR 661
Query: 243 QQEKVKPNS 251
+++ V+ +
Sbjct: 662 KEKAVRKET 670
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 221/394 (56%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E +I T ++ Y++ G + A +F E+ +N ++W M
Sbjct: 181 YCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLF-EVMPEKNEVSWTAM 239
Query: 85 IAGMMLNGRSEKAMELFEGL-----------------------AHEGF----KPDPATWN 117
+ G GR E+A ELF+ + A + F + D TW+
Sbjct: 240 LMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWS 299
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI + + G EA LF MQ G+ + + SVLS CA L++L G++ H ++++
Sbjct: 300 AMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKS 359
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +A+ LI+MY+KCG AR+ FD+F P D WN++I+GY ++G E A++
Sbjct: 360 QFDSDVFVASVLITMYVKCGDLVKARQIFDRFS--PKDIVMWNSIITGYAQHGLVEEALQ 417
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F M + + +FV VLSAC + G V + L+IF M + ++PK EH+ CMVDLL
Sbjct: 418 VFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLL 477
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+G +++A +LI+++P E ++ +LLGAC H+N +L E A KL ++EP+N P++
Sbjct: 478 GRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYI 537
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LSNIYA GRW DV +R+ + ++++K PG S
Sbjct: 538 LLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCS 571
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 57/286 (19%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + T ++ Y + G L A +F E+ RN+++W TMI+G + NG+ + A +LFE +
Sbjct: 170 DVVARTNMISGYCQEGRLAEARELFDEMP-RRNVISWTTMISGYVQNGQVDVARKLFEVM 228
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ + +W +M+ G++Q G EA +LF+ M +V AC +A+
Sbjct: 229 PEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVV-----------AC---NAM 270
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG +G V + AR+ FDQ I+ D W+AMI
Sbjct: 271 ILGFGQNGEVAK-------------------------ARQVFDQ--IREKDDGTWSAMIK 303
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-----TMMDD 279
Y R G A+ +F LMQ+E V+ N S ++VLS C +D Q+ + D
Sbjct: 304 VYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDS 363
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D + ++ + + G L +AR++ + +++S++
Sbjct: 364 DVFVA------SVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 1/138 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N + ISV+S CASL L GRQVH +K + SD + + L+ MY+KCG L A
Sbjct: 327 QSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQ 386
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++I+ WN++I G +G E+A+++F + G D T+ ++S S G
Sbjct: 387 IFDRF-SPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTG 445
Query: 128 MRFEAFKLFEKMQSTGMV 145
E ++FE M+S +V
Sbjct: 446 KVKEGLEIFESMKSKYLV 463
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
Y + G + A VF E+ + I++WN+M+AG N R +A LF+ + + +
Sbjct: 26 YARIGQIESARRVFDEMP-DKGIVSWNSMVAGYFQNNRPREARYLFDKMPER----NTVS 80
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQS------TGMVPSL------------------KCV 151
WN +ISG+ + M EA K F+ M T MV K V
Sbjct: 81 WNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV 140
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
S L ++ E G + KD T +IS Y + G+ + AR FD E+
Sbjct: 141 VSWTVMLGGLIQVRRIDEARG-LFDIMPVKDVVARTNMISGYCQEGRLAEARELFD--EM 197
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ W MISGY +NG+ + A ++F++M ++ N S+ A+L G +++A
Sbjct: 198 PRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEAS 253
Query: 272 QIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++F M P + C M+ G++G + +AR++ ++ E + +++
Sbjct: 254 ELFDAM-------PVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMI 302
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 13/138 (9%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I+ Y + GQ ARR FD+ PD WN+M++GY +N A +FD M +
Sbjct: 23 IARYARIGQIESARRVFDEM---PDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N+ S+ ++S V +A + F M + + + MV + G + EA
Sbjct: 77 -NTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVS-----WTAMVRGYVQEGLVSEAET 130
Query: 309 LIRELPEPTVSVYHSLLG 326
L ++PE V + +LG
Sbjct: 131 LFWQMPEKNVVSWTVMLG 148
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN++TF S++ ACA L ++ GR++HG +K E + +G+A+++MY KCG L AH +
Sbjct: 311 PNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLI 370
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + D WNS+I+ FSQ G
Sbjct: 371 FGRIS------------------------------------IKDAICWNSIITSFSQDGK 394
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M G+ V++ LSACA++ AL GKE HG +I+ D +A
Sbjct: 395 PEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSA 454
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY KCG+ + AR F+ + K + WN++I+ YG +G ++ +F M +E ++
Sbjct: 455 LINMYAKCGKLNIARLVFNLMQEK--NEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQ 512
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ +LS+CGHAG V+ ++ F M +++G+ + EH+ CM DL GR+G LDEA E
Sbjct: 513 PDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFE 572
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P SV+ +LLGAC H N +L E + L ++EP+N +++L+++ A G+
Sbjct: 573 VITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGK 632
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W V +I+ ++ +R + K+PG S
Sbjct: 633 WRSVHKIQHLMKERGVQKVPGCS 655
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 172/357 (48%), Gaps = 45/357 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+TF S + + A L+ +++HG ++ D + +AL+D+Y KC
Sbjct: 209 KPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCR------- 261
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ ++A M N + K D + +MISG+ G
Sbjct: 262 --------------DAVMACKMFNLST---------------KFDIVIYTAMISGYVLNG 292
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M +A ++F + M+P+ +S+L ACA L+A+KLG+E HG++I+ +L + + +
Sbjct: 293 MNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGS 352
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+++MY KCG+ A F + IK D WN++I+ + ++G+ E A+ +F M E V
Sbjct: 353 AIMNMYAKCGRLDLAHLIFGRISIK--DAICWNSIITSFSQDGKPEEAIYLFRQMGMEGV 410
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
K + + A LSAC + A H K + F + + ++++ + G+L+
Sbjct: 411 KYDCVTVSAALSACANIPALHYGKEIHGFMIKG---AFESDLFDMSALINMYAKCGKLNI 467
Query: 306 ARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSN 360
AR + + E ++S++ A H L L M + ++P++ T ILS+
Sbjct: 468 ARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 158/332 (47%), Gaps = 53/332 (15%)
Query: 2 KECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
K+ +S E P+SVTF V+S S +++GRQ+HGL ++ ++G LV +Y K
Sbjct: 100 KDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSK- 158
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRS-EKAMELFEGLAHEGFKPDPATWNS 118
GR A +LF+ + + D WN
Sbjct: 159 --------------------------------GRQLGDARKLFDMMP----QIDLVVWNR 182
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI G+ Q G +A LF +M S G+ P TS L + A+ S+LK KE HG+++R
Sbjct: 183 MIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHG 242
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFD---QFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D + +ALI +Y KC A + F+ +F+I + AMISGY NG + A
Sbjct: 243 VILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDI-----VIYTAMISGYVLNGMNKDA 297
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+EIF + Q+K+ PN+ +F ++L AC A + + L + + ++ L+ K +
Sbjct: 298 LEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNE---LEEKCPVGSAI 354
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+++ + GRLD A + + ++S++
Sbjct: 355 MNMYAKCGRLDLAHLIFGRISIKDAICWNSII 386
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 157/397 (39%), Gaps = 75/397 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI C L ++ G+ + + L++ D + ++L+ +Y GC+ A
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D WN MI+G+ Q G
Sbjct: 68 FDKM------------------------------------IDKDCVLWNVMINGYVQCGE 91
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A KLF+ M S+ P VLS + ++ G++ HG V+R+ L+ +
Sbjct: 92 SDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNT 151
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+++Y K Q AR+ FD + D WN MI GY +NG + A +F+ M +K
Sbjct: 152 LVTVYSKGRQLGDARKLFDM--MPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIK 209
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF-------TMMD-------DDFGLKPKQEHFGC-- 292
P+S +F + L + + + + +I ++D D K + C
Sbjct: 210 PDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKM 269
Query: 293 --------------MVDLLGRSGRLDEARELIRELPE----PTVSVYHSLLGACWCHLNS 334
M+ +G +A E+ R L + P + S+L AC
Sbjct: 270 FNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAI 329
Query: 335 DLGEEMAMKL--QEMEPENPTPFVILSNIYAGLGRWE 369
LG E+ + E+E + P I+ N+YA GR +
Sbjct: 330 KLGRELHGYIIKNELEEKCPVGSAIM-NMYAKCGRLD 365
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 6/216 (2%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G+ P V+ C L+ ++LGK ++ + D +A++LI +Y G
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
ARRFFD+ K D WN MI+GY + GE +SA+++F M + KP+S +F VL
Sbjct: 61 IEDARRFFDKMIDK--DCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVL 118
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
S V+ Q+ ++ GL +V + + +L +AR+L +P+ +
Sbjct: 119 SISCSEAMVEYGRQLHGLVVRS-GLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDL 177
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
V++ ++G ++ + ++ +M EM P
Sbjct: 178 VVWNRMIGG---YVQNGFMDDASMLFNEMISAGIKP 210
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/374 (37%), Positives = 211/374 (56%), Gaps = 31/374 (8%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-- 102
D TA+V Y + G L A VF + +N ++WN M+A + E+A ELF+
Sbjct: 323 DVFTWTAIVSGYAQNGMLEEAKRVFDAMP-DKNAVSWNAMMAAYVQRRMMEEAKELFDAM 381
Query: 103 -------------GLAHEGF------------KPDPATWNSMISGFSQLGMRFEAFKLFE 137
G A G + D +W +M++ +SQ+G E +LF+
Sbjct: 382 PCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+M G + VLS CAD++AL+ G + H +I+A + AL++MY KCG
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
A F++ E + D WN MI+GY R+G + A+E+FD M++ KP+ + V V
Sbjct: 502 SMEEAHSAFEEMEER--DVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGV 559
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EP 316
L+AC H+G V+K + F M DFG+ K EH+ CM+DLLGR+GRLDEA L++++P EP
Sbjct: 560 LAACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEP 619
Query: 317 TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ 376
+++ +LLGA H NS+LG A K+ E+EPEN +V+LSNIYA G+W DV ++R
Sbjct: 620 DSTMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRH 679
Query: 377 MINDRQLTKLPGIS 390
++++R + K+PG S
Sbjct: 680 IMHERGVKKVPGFS 693
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F V+S CA + L+ G Q+H +K +G AL+ MY KCG + AH+ F
Sbjct: 451 NRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAF 510
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ R++++WNTMIAG +G ++A+E+F+ + KPD T +++ S G+
Sbjct: 511 EEME-ERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569
Query: 130 FEAFKLFEKMQSTGMVPS----LKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDES 184
+ F M V + C+ +L L A+ L K+ D +
Sbjct: 570 EKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDM-------PFEPDST 622
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
M AL+ R ++ FE++P++ + + + Y +G++ ++ +M
Sbjct: 623 MWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMH 682
Query: 244 QEKVK 248
+ VK
Sbjct: 683 ERGVK 687
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 138/316 (43%), Gaps = 31/316 (9%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+ +++ G +P A +F + R+ T+NTM+AG NGR +A+ F + +PD
Sbjct: 114 ITAHMRAGRVPDAERLFAAMP-RRSTSTYNTMLAGYAANGRLPQALSFFRSIP----RPD 168
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
++N+++ + LF++M V ++S+ A+ + L +
Sbjct: 169 SFSYNTLLHALGVSSSLADVRALFDEMPVKDSV----SYNVMISSHANHGLVSLAR---- 220
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
H KD +++ Y++ G+ AR FD D WNA+++GY + +
Sbjct: 221 HYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSR--TEWDAISWNALMAGYVQRSQI 278
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-- 290
E A ++F+ M Q V S+ ++S G + +A ++F + P ++ F
Sbjct: 279 EEAQKMFNKMPQRDV----VSWNTMVSGYARRGDMAEARRLFD-------VAPIRDVFTW 327
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+V ++G L+EA+ + +P+ +++++ A ++ + EE M
Sbjct: 328 TAIVSGYAQNGMLEEAKRVFDAMPDKNAVSWNAMMAA---YVQRRMMEEAKELFDAMPCR 384
Query: 351 NPTPFVILSNIYAGLG 366
N + + YA G
Sbjct: 385 NVASWNTMLTGYAQAG 400
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 224/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S LL G +HG K+ ++ M+GTA++ MY K G
Sbjct: 11 EPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRK 70
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M NG+ + A++LF+ + + D +W +MI+GF
Sbjct: 71 ARLVFDYME-EKNSVTWNTMIDGYMRNGQVDDAVKLFDEMP----ERDLISWTAMINGFV 125
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 126 KKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVR 185
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 186 VSNSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGHAHESLVYFRKMQE 243
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KPN+ +F L+AC H G V++ L+ F M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 244 EGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLE 303
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A ++++ +P +P V SLL AC N+ + E MK L ++ ++ + +VILSN+Y
Sbjct: 304 DALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVILSNMY 363
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 364 AADGKWEGASKMRRKMKGLGLKKEPGFSS 392
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 70/258 (27%)
Query: 101 FEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
F G+ G +P+ T+ +++SG+ L EA
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEA---------------------------- 33
Query: 161 LSALKLGKETHGHVIRADLNKDESM-ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
LG HG+ + L++ M TA++ MY K G+ AR FD E K + W
Sbjct: 34 -----LGDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEK--NSVTW 86
Query: 220 NAMISGYGRNGEYESAVEIFD-------------------------------LMQQEKVK 248
N MI GY RNG+ + AV++FD MQ VK
Sbjct: 87 NTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVK 146
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + +A L+AC + G + L I ++ DF K ++DL R G ++ AR
Sbjct: 147 PDYVAIIAALAACTNLGALSFGLWIHRYVVSQDF--KNNVRVSNSLIDLYCRCGCVEFAR 204
Query: 308 ELIRELPEPTVSVYHSLL 325
++ ++ + TV ++S++
Sbjct: 205 QVFDKMEKRTVVSWNSVI 222
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 216/384 (56%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T S++SACA L L G+++HG L+ + D I +LV +Y++CG
Sbjct: 499 EPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCG------- 551
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++A + + EK + WN+MI+GFSQ
Sbjct: 552 --------------KILLAKLFFDNMEEKNL---------------VCWNTMINGFSQNE 582
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
F+A +F +M S+ + P + L AC+ +SAL+LGKE H +++ L + +
Sbjct: 583 FPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTC 642
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG ++ FD+ +K + WN +I+GYG +G A+E+F MQ
Sbjct: 643 SLIDMYAKCGCMEQSQNIFDRVHLKGE--VTWNVLITGYGIHGHGRKAIELFKSMQNAGF 700
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+S +F+A+L+AC HAG V + L+ M FG+KPK EH+ C+VD+LGR+GRL+EA
Sbjct: 701 RPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEAL 760
Query: 308 ELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL+ ELP+ P ++ SLL +C + + D+GE++A KL E+ P+ +V++SN YA LG
Sbjct: 761 ELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLG 820
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++RQ + + L K G S
Sbjct: 821 KWDEVRKMRQRMKEIGLQKDAGCS 844
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 41/270 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNV 68
N VT ++V+ C + +++HG L+ QSD ++ A V Y KCG L A V
Sbjct: 399 NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGV 458
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F GM E M ++WN++I G Q G
Sbjct: 459 F----------------CGM------ESKM--------------VSSWNALIGGHVQNGF 482
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A L+ M+ +G+ P L + S+LSACA L +L GKE HG ++R DE + +
Sbjct: 483 PRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICIS 542
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+S+Y++CG+ A+ FFD E K + WN MI+G+ +N A+++F M K+
Sbjct: 543 LVSLYVQCGKILLAKLFFDNMEEK--NLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIW 600
Query: 249 PNSASFVAVLSACGH--AGHVDKALQIFTM 276
P+ S + L AC A + K L F +
Sbjct: 601 PDEISIIGALGACSQVSALRLGKELHCFAV 630
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 42/256 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T VI AC + ++ G VHG LK + SD +G AL+ MY K G + A V
Sbjct: 194 PDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKV 253
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ RN+++W NS++ + G+
Sbjct: 254 FDKMP-QRNLVSW-----------------------------------NSVMYACLENGV 277
Query: 129 RFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
E++ LF+ + + G++P + + +V+ CA ++LG HG ++ L + +
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE- 245
++L+ MY KCG AR FD E + WN+MI GY ++ ++ A E+ MQ E
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTNE---KNVISWNSMIGGYSKDRDFRGAFELLRKMQMED 394
Query: 246 KVKPNSASFVAVLSAC 261
KVK N + + VL C
Sbjct: 395 KVKVNEVTLLNVLPVC 410
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 150/325 (46%), Gaps = 50/325 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++VI CA ++ G HGL LK+ + + ++L+DMY KCG L A +
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +N+++WN SMI G+S+
Sbjct: 357 FD--TNEKNVISWN-----------------------------------SMIGGYSKDRD 379
Query: 129 RFEAFKLFEKMQSTGMVPSLKC-VTSVLSACAD-LSALKLGKETHGHVIRAD-LNKDESM 185
AF+L KMQ V + + +VL C + + LKL KE HG+ +R + DE +
Sbjct: 380 FRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKL-KEIHGYALRHGFIQSDELV 438
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A A ++ Y KCG +A F E K + WNA+I G+ +NG A++++ LM+
Sbjct: 439 ANAFVAGYAKCGSLHYAEGVFCGMESKM--VSSWNALIGGHVQNGFPRKALDLYLLMRGS 496
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGC--MVDLLGRSGR 302
++P+ + ++LSAC + +I +M+ + F L + F C +V L + G+
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL----DEFICISLVSLYVQCGK 552
Query: 303 LDEARELIRELPEPTVSVYHSLLGA 327
+ A+ + E + +++++
Sbjct: 553 ILLAKLFFDNMEEKNLVCWNTMING 577
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 137/315 (43%), Gaps = 44/315 (13%)
Query: 17 VISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++ C ++ GR++H ++ Q+D ++ T LV MY C
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICD--------------- 143
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+ + ++ N K + L WN+++SG+ + + +A +
Sbjct: 144 ------SPYDSCLVFNASRRKNLFL---------------WNALLSGYLRNSLFRDAVFV 182
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M S T VP + V+ AC + ++LG+ HG ++ + D + ALI+MY
Sbjct: 183 FVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYG 242
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD--LMQQEKVKPNSA 252
K G A + FD+ + + WN+++ NG +E + +F L E + P+ A
Sbjct: 243 KFGFVESAVKVFDK--MPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVA 300
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V V+ C G V + +F + GL + + ++D+ + G L EAR L +
Sbjct: 301 TMVTVIPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF-D 358
Query: 313 LPEPTVSVYHSLLGA 327
E V ++S++G
Sbjct: 359 TNEKNVISWNSMIGG 373
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 154 VLSACADLSALKLGKETHGHVIRA-DLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+L C + +++G++ H + + D + T L++MY C P + F+ K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSAC--------GH 263
+ WNA++SGY RN + AV +F +++ + P++ + V+ AC G
Sbjct: 159 --NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGE 216
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
A H AL+ + D G ++ + G+ G ++ A ++ ++P+ + ++S
Sbjct: 217 AVH-GFALKTKVLSDVFVG--------NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNS 267
Query: 324 LLGAC 328
++ AC
Sbjct: 268 VMYAC 272
>gi|242066664|ref|XP_002454621.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
gi|241934452|gb|EES07597.1| hypothetical protein SORBIDRAFT_04g034420 [Sorghum bicolor]
Length = 496
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 217/387 (56%), Gaps = 13/387 (3%)
Query: 9 PNSVTFISVISACA----SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
PN VT ++V+SACA S L +H LK+ S ++ T L YL
Sbjct: 67 PNDVTLLTVLSACADSPSSPLARPLALTLHARALKLFP-SHLLLSTCLARFYLASRLPHL 125
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + R+++T+NTM++G+M NG + A E+F+G+ PD +W ++I GF
Sbjct: 126 ALQLFDTMP-VRSVVTYNTMVSGLMRNGLVDAAFEVFDGMP----GPDKVSWTALIDGFV 180
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F M + P + +V+SACA++ AL LG H V+R L ++
Sbjct: 181 KNGRHDEAIDCFRAMLLDSVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVR 240
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A +LI MY +CGQ A + F I+ WN+MI G NG A+E+F+ M++
Sbjct: 241 VANSLIDMYARCGQVKLAAQVF--HSIRKRTVVSWNSMIVGLAANGLCTEAIELFEEMRR 298
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ KP++ + VL+AC HAG + L+ + +M ++G+ + EH+GC+VDLLGR+GRLD
Sbjct: 299 QGFKPDAVTLTGVLTACSHAGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRLD 358
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ++ +P P V +LL C H + D+ E++ L E++P +V+LSNIYA
Sbjct: 359 EAMHVVETMPMRPNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYA 418
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G+W+ G++R ++ R + K PG S
Sbjct: 419 AVGKWDGAGKVRSLMKARGVKKRPGHS 445
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 26/298 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EP+ VT I+V+SACA + L G VH L L+ + + + +L+DMY +CG + A
Sbjct: 199 SVEPDYVTLIAVVSACAEVGALGLGMWVHRLVLRQGLERNVRVANSLIDMYARCGQVKLA 258
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ R +++WN+MI G+ NG +A+ELFE + +GFKPD T +++ S
Sbjct: 259 AQVFHSIR-KRTVVSWNSMIVGLAANGLCTEAIELFEEMRRQGFKPDAVTLTGVLTACSH 317
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA-DLN 180
G+ + ++ M + G+ ++ CV +L L + HV+ +
Sbjct: 318 AGLTEHGLRYYDLMTTEYGIAARMEHYGCVVDLLGRAGRL-------DEAMHVVETMPMR 370
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+E + AL++ G A + FE+ P A + + + Y G+++ A ++
Sbjct: 371 PNEVVLGALLAGCRMHGDLDMAEQLMQHLFELDPGGDANYVLLSNIYAAVGKWDGAGKVR 430
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LM+ VK + +D + F D P+ E G M+ LL
Sbjct: 431 SLMKARGVKKRPGHSIV---------EIDGDVHEFVSSDRS---HPQAEEIGQMLGLL 476
>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Cucumis sativus]
Length = 840
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 238/416 (57%), Gaps = 37/416 (8%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT S+++A A L+ G++ H ++ +SD + ++++DMY KC L CA VF
Sbjct: 382 DSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVF 441
Query: 70 Q---------------------------------ELKG-SRNILTWNTMIAGMMLNGRSE 95
+L+G N+++WN++I G++ G+ +
Sbjct: 442 DATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVD 501
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A + F + G P+ TW ++I G +Q G+ EAF F+ M+ G+ P+ ++S+L
Sbjct: 502 QAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLL 561
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
SAC+ +++L G+ H ++ R +L+ + +L++MY KCG + A+R FD +K +
Sbjct: 562 SACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMI-LKKEL 620
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
P + NAMISGY +G+ A+ +F +++E +KP+ +F ++LSACGHAG V + L++F
Sbjct: 621 PVY-NAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAGLVREGLELFI 679
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M + + + EH+GC+V +L RS LDEA +I +P EP ++ SLL AC H +
Sbjct: 680 DMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDF 739
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E + +L ++EP+N +V LSN YA G W++ ++R ++ +R L+K+PG S
Sbjct: 740 ELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGLMKERSLSKIPGHS 795
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 164/380 (43%), Gaps = 44/380 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P VT S +SA A+L + G+Q H L + + ++G++L++ Y K G + A V
Sbjct: 280 PTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELV 339
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ + D TWN ++SG+ G+
Sbjct: 340 FSEM------------------------------------LEKDTVTWNLLVSGYVHNGL 363
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A L MQS + + S+++A AD LKLGKE H +R +L D ++A++
Sbjct: 364 VDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAVASS 423
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KC + ARR FD D WN +++ Y G +++F MQ E +
Sbjct: 424 IIDMYAKCEKLECARRVFDA--TAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGLP 481
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN S+ +V+ + G VD+A F M G+ P + ++ L ++G DEA
Sbjct: 482 PNVISWNSVILGLLNKGKVDQAKDTFMEM-QSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 309 LIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIYA 363
+ + E P SLL AC + G + + E TP + L N+YA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYA 600
Query: 364 GLGRWEDVGRIRQMINDRQL 383
G R+ MI ++L
Sbjct: 601 KCGSINQAKRVFDMILKKEL 620
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 58/346 (16%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
A +L ++ FG+ VH +K+ + T+L+DMY KCG A VF ++
Sbjct: 190 ASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFDKI------- 242
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
+ + WNSMI F+Q G+ EA + F +M
Sbjct: 243 -----------------------------LEKNIVAWNSMIVNFTQNGLNAEAVETFYEM 273
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
+ G+ P+ ++S LSA A+LS + GK+ H + + L + ++LI+ Y K G
Sbjct: 274 RVEGVAPTQVTLSSFLSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLV 333
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
A F E+ D WN ++SGY NG + A+++ +MQ E ++ +S + ++++
Sbjct: 334 EDAELVFS--EMLEKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMA 391
Query: 260 AC--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A G GH + + ++ D + ++D+ + +L+ AR +
Sbjct: 392 AAADSRNLKLGKEGH---SFCVRNNLESDVAVASS------IIDMYAKCEKLECARRVFD 442
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
+ + ++++LL A +S GE + + Q M+ E P VI
Sbjct: 443 ATAKRDLIMWNTLLAAYAEQGHS--GETLKLFYQ-MQLEGLPPNVI 485
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 125/246 (50%), Gaps = 14/246 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS++ S++SAC+++ L GR +H + E T + +LV+MY KCG + A
Sbjct: 551 KPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYAKCGSINQAKR 610
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ + + +N MI+G L+G++ +A+ LF L E KPD T+ S++S G
Sbjct: 611 VF-DMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTSILSACGHAG 669
Query: 128 MRFEAFKLFEKMQSTGMVPS----LKCVTSVLSACADL-SALKLGKETHGHVIRADLNKD 182
+ E +LF M S + + C+ S+LS +L AL++ ++ D
Sbjct: 670 LVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRI-------ILGMPFEPD 722
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +L++ + R F++ +++PD+ + A+ + Y G ++ A ++ L
Sbjct: 723 AFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVRGL 782
Query: 242 MQQEKV 247
M++ +
Sbjct: 783 MKERSL 788
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 132/317 (41%), Gaps = 42/317 (13%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQ--SDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+HG LK + + I T LV Y KC A+ +F +L+
Sbjct: 84 LLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQ- 142
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+N +W ++ G K S++G EA
Sbjct: 143 VQNEFSWAAIM----------------------GLK-------------SRMGFNQEALM 167
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M G++ + A L + GK H +V++ L +AT+L+ MY
Sbjct: 168 GFREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYG 227
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG A++ FD+ I + WN+MI + +NG AVE F M+ E V P +
Sbjct: 228 KCGLCEEAKKVFDK--ILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTL 285
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+ LSA + +D+ Q + GL+ +++ + G +++A + E+
Sbjct: 286 SSFLSASANLSVIDEGKQGHALAVLS-GLELTNILGSSLINFYSKVGLVEDAELVFSEML 344
Query: 315 EPTVSVYHSLLGACWCH 331
E +V +LL + + H
Sbjct: 345 EKD-TVTWNLLVSGYVH 360
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 99/248 (39%), Gaps = 20/248 (8%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV 174
++ + IS + G EA L ++ + +L C AL LG++ HG +
Sbjct: 45 SYLNHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRI 104
Query: 175 IR--ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
++ + K+E + T L+ Y KC + A R F + +++ + W A++ R G
Sbjct: 105 LKNGESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFS--WAAIMGLKSRMGFN 162
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
+ A+ F M + + ++ A G AL+ K GC
Sbjct: 163 QEALMGFREMHEYGLLLDNFVIPIAFKASG-------ALRWIGFGKSVHAYVVKMGLGGC 215
Query: 293 ------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
++D+ G+ G +EA+++ ++ E + ++S++ + L E E
Sbjct: 216 IYVATSLLDMYGKCGLCEEAKKVFDKILEKNIVAWNSMIVN---FTQNGLNAEAVETFYE 272
Query: 347 MEPENPTP 354
M E P
Sbjct: 273 MRVEGVAP 280
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 222/379 (58%), Gaps = 8/379 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+S L G+ +HG +K ++ + +L+ +Y K G + A +F E+K ++
Sbjct: 277 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK-TK 335
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLA----HEGFKPDPATWNSMISGFSQLGMRFEA 132
NI++WN +I+ G ++A +F L + +P+ +W+++I GF+ G EA
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ + + + SVLS CA+L+AL LG+E HGHV+R+ ++ + + LI+M
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 455
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y K G F++ E K D WN M++GYG +G E+A+ FD M ++ +P+
Sbjct: 456 YTKSGSFKEGNLVFEKIENK--DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 513
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FVAVLSAC HAG V + ++F M +F ++P+ EH+ CMVDLLGR+G L EA ++++
Sbjct: 514 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 573
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP V+ +LL +C H N+++ EE A ++ + E +++LSNIYA GRWED
Sbjct: 574 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 633
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R + L K PG S
Sbjct: 634 AKVRISAKTKGLKKTPGQS 652
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 11/279 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L + TF VI ACA + + R VHG +++ Q + +G L+ MY K G +
Sbjct: 129 LGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF+ + R+ ++WNTM++G LN A E+F + G +P+ TW S++S +
Sbjct: 189 ARKVFERM-AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHA 247
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G E +LF +M+ G+ + + + VLS DL+A GK HG+V++
Sbjct: 248 RCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLF 307
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI +Y K G + AR F EIK + WNA+IS Y G + A IF +Q
Sbjct: 308 VKNSLICLYGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIF--LQL 363
Query: 245 EK------VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
EK V+PN S+ AV+ G ++AL++F M
Sbjct: 364 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ NSVT SV+S CA L L GR++HG ++ + ++G L++MY K G +
Sbjct: 408 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ ++++++WNTM+AG ++G E A+ F+ + +GF+PD T+ +++S S G
Sbjct: 468 VFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 526
Query: 128 MRFEAFKLFEKM 139
+ E +LF+KM
Sbjct: 527 LVAEGRELFDKM 538
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 28 QFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ--ELKGSRNILTWNTMI 85
+Q+H + + +V +Y G + A VF+ ++ N+L WN+++
Sbjct: 48 HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSIL 107
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
+ +G E+A+E++ + G D GF+ F L
Sbjct: 108 RANVAHGYCEEALEIYCRMRKLGVSAD---------GFT--------FPL---------- 140
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
V+ ACA + + KL + HGHV+ + + L+ MY K G+ AR+
Sbjct: 141 --------VIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKV 192
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
F++ ++ WN M+SGY N + A E+F +M ++PN ++ ++LS+ G
Sbjct: 193 FERMAVR--SCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Query: 266 HVDKALQIFTMM 277
+ +++F M
Sbjct: 251 QHVETMELFGRM 262
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 212/382 (55%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+VT + +I CA ++L FG +H +++ D +G L+ MY++CG +
Sbjct: 158 NAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSV------- 210
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ A +LF+G+ +G TWN+MISG++Q G+
Sbjct: 211 -------------------------DFARKLFDGMPEKGL----ITWNAMISGYAQNGLA 241
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
L+ KM+ TG+VP + VLS+CA L A G+E + + + + AL
Sbjct: 242 GHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNAL 301
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY +CG AR FD K + W A+I+GYG +G+ E AV++FD M P
Sbjct: 302 INMYARCGNLVKARAIFDGMTEK--NVISWTAIIAGYGMHGQGELAVQLFDEMISSDELP 359
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ A+FV+VLSAC HAG +K L FT M+ D+GL+P EH+ C+VDLLGR+GRL+EAR+L
Sbjct: 360 DGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKL 419
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I + EP +V+ +LLGAC H N +L E K+ E EP N +V+LSNI++ G
Sbjct: 420 IGSMSVEPDGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNM 479
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E + R+R M+ +R+L K PG S
Sbjct: 480 EGILRVRVMMRERKLKKEPGCS 501
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 1/212 (0%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
A+WN+ + ++ EA L+ +M ++G P+ +CA LS G + HGH
Sbjct: 22 ASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGH 81
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
VI+ + + T+LISMY KC + AR+ FD+ + +NA+I+GY N +
Sbjct: 82 VIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFS 141
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
AV +F M++E V N+ + + ++ C H+ + FGL C+
Sbjct: 142 DAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHA-CSVRFGLDGDLSVGNCL 200
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + R G +D AR+L +PE + +++++
Sbjct: 201 LTMYVRCGSVDFARKLFDGMPEKGLITWNAMI 232
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS---DTMIGTALVDMYLKCGCLPCA 65
P+ VT + V+S+CA L GR+V +IE + + AL++MY +CG L A
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQ---RIELSGFGFNPFLKNALINMYARCGNLVKA 314
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + +N+++W +IAG ++G+ E A++LF+ + PD A + S++S S
Sbjct: 315 RAIFDGMT-EKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSH 373
Query: 126 LGMRFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ + F M+ G+ P CV +L L +E + +
Sbjct: 374 AGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRL------EEARKLIGSMSVEP 427
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ AL+ A F++ E +P + ++ + + + G E + +
Sbjct: 428 DGAVWGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRV 487
Query: 241 LMQQEKVK 248
+M++ K+K
Sbjct: 488 MMRERKLK 495
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 143/381 (37%), Positives = 211/381 (55%), Gaps = 39/381 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +SV+SACA L G + S+ + AL+DMY KCG L A +
Sbjct: 259 PNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTAREL 318
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + D +WN MI G++ +
Sbjct: 319 FDDM------------------------------------LERDVISWNVMIGGYTHMCS 342
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M ++G+ P+ S+L +CA L A+ LGK H ++ + + S++T+
Sbjct: 343 YKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTS 402
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG AR+ FD +IK A WNAMI G +G+ + A E+F M + ++
Sbjct: 403 LIDLYAKCGNIVAARQVFDGMKIK--SLASWNAMICGLAMHGQADKAFELFSKMSSDGIE 460
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV +LSAC HAG VD Q F+ M D+ + PK +H+GCM+DLLGR+G +EA
Sbjct: 461 PNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAES 520
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++ + +P +++ SLLGAC H +LGE +A +L E+EP+NP +V+LSNIYAG G+
Sbjct: 521 LLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGK 580
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
W+DV RIR +NDR + K+PG
Sbjct: 581 WDDVARIRTRLNDRGMKKVPG 601
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 16/382 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNS TF ++ +CA L G+Q+H LK+ SD I T+L++MY + G + A
Sbjct: 126 EPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQL 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+ +++ +IAG L G ++A +LF+ + + D +WN+MI+G++Q+G
Sbjct: 186 VFDQ-SNFRDAISFTALIAGYALWGYMDRARQLFDEMPVK----DVVSWNAMIAGYAQMG 240
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LFE M+ + P+ + SVLSACA +AL LG + L + +
Sbjct: 241 RSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVN 300
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FD ++ D WN MI GY Y+ A+ +F M V
Sbjct: 301 ALIDMYSKCGDLQTARELFD--DMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV 358
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P +F+++L +C H G +D I ++ +F ++DL + G + AR
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLS-TSLIDLYAKCGNIVAAR 417
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + +++ +++++ H +D E+ K+ +EP T ILS +AG
Sbjct: 418 QVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAG 477
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
L D+G+ M+ D +++
Sbjct: 478 L---VDLGQQFFSSMVQDYKIS 496
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 44/315 (13%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+G A+ LF + +P+ WNSMI G S A F +M +G+ P+
Sbjct: 76 SGDISYAISLFNSIE----EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYT 131
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS---------- 200
+L +CA L++ GK+ H HV++ D + T+LI+MY + G+ +
Sbjct: 132 FPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSN 191
Query: 201 ----------------W-----ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
W AR+ FD+ +K D WNAMI+GY + G + A+ +F
Sbjct: 192 FRDAISFTALIAGYALWGYMDRARQLFDEMPVK--DVVSWNAMIAGYAQMGRSKEALLLF 249
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
+ M++ V PN ++ V+VLSAC + +D + + ++D GL + ++D+ +
Sbjct: 250 EDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDR-GLCSNLKLVNALIDMYSK 308
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGAC--WCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
G L AREL ++ E V ++ ++G C L M +EP T I
Sbjct: 309 CGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSI 368
Query: 358 L-SNIYAG---LGRW 368
L S + G LG+W
Sbjct: 369 LPSCAHLGAIDLGKW 383
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 223/385 (57%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T+ VI AC FG VH +K + D+ I ++L+ +Y L A
Sbjct: 163 KPDHMTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQ 222
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +R++++WN MI G + + A +F+ + D +WN+MI+G++ G
Sbjct: 223 LFN-LCSARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAICG 277
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF++M++ G+ P+ V S+LSACA L AL G H ++ + + + T
Sbjct: 278 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 337
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ S A + F+ E K D WN +I+G +G + A ++F M++ V
Sbjct: 338 ALVDMYAKCGKISLATQVFNAMESK--DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGV 395
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FVA+LSAC HAG VD+ ++ M +G++PK EH+GC++DLL R+G L+EA
Sbjct: 396 EPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAM 455
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P EP S +LLG C H N +LGE + +L ++P + +++LSNIYA
Sbjct: 456 ELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAK 515
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W+D ++R ++ ++K+PG+S
Sbjct: 516 KWDDARKVRNLMKVNGISKVPGVSV 540
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 165/361 (45%), Gaps = 20/361 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L++ P++ +S+ + C +L +L +QVH +I ++ + + P
Sbjct: 61 LTNPPSNPQILSLFNPCKTLRHL---KQVHA---QIITHHNSPFQLSALASLSALSPFPT 114
Query: 65 ----AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A +F L+ L +N++I + + +A+ L+ + G KPD T+ +I
Sbjct: 115 FLAYAKTIFHHLQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVI 173
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
++ + + + + +G V+S++ A+ L K+ +
Sbjct: 174 KACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQ----LFNLCSA 229
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D A+I Y+K + AR FD+ + D WN MI+GY G+ A+ +FD
Sbjct: 230 RDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR--DVISWNTMINGYAICGKPNEALALFD 287
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ VKP A+ V++LSAC H G +DK L + T ++D+ ++ +VD+ +
Sbjct: 288 QMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN-RIEVNSIVGTALVDMYAKC 346
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVIL 358
G++ A ++ + V +++++ H N +++ +++E +EP + T IL
Sbjct: 347 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAIL 406
Query: 359 S 359
S
Sbjct: 407 S 407
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/449 (33%), Positives = 234/449 (52%), Gaps = 69/449 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+SVT +S++ A A + L+ GR +HG + +S + AL+DMY KCG A
Sbjct: 243 KPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARL 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VF+ ++ S+ +++WNTMI G NG SE+A F + EG P T
Sbjct: 303 VFKGMR-SKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLG 361
Query: 116 -----W------------------NSMISGFSQLGMRFEAFKLFEKMQSTGMV------- 145
W NS+IS +S+ A +F ++ T +
Sbjct: 362 DLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNVTWNAMILG 421
Query: 146 ---------------------PSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKD 182
L C T V++A AD S + K HG +RA ++ +
Sbjct: 422 YAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNN 481
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++TAL+ MY KCG AR+ FD + + WNAMI GYG +G + +++F+ M
Sbjct: 482 VFVSTALVDMYAKCGAIKTARKLFDMMQER--HVITWNAMIDGYGTHGVGKETLDLFNEM 539
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+ VKPN +F++V+SAC H+G V++ L +F M +D+ L+P +H+ MVDLLGR+G+
Sbjct: 540 QKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQ 599
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LD+A I+E+P +P +SV ++LGAC H N +LGE+ A KL +++P+ V+L+NI
Sbjct: 600 LDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLANI 659
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA W+ V ++R + D+ L K PG S
Sbjct: 660 YASNSMWDKVAKVRTAMEDKGLHKTPGCS 688
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 138/313 (44%), Gaps = 39/313 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ ++ C L L+ GR++HGL + +S+ + TA++ +Y KC
Sbjct: 148 YACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC-------------- 193
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
R I + A ++FE + H+ D +W ++++G++Q G A
Sbjct: 194 --RQI----------------DNAYKMFERMQHK----DLVSWTTLVAGYAQNGHAKRAL 231
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+L +MQ G P + S+L A AD+ AL++G+ HG+ R+ ++ AL+ MY
Sbjct: 232 QLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR F K WN MI G +NGE E A F M E P +
Sbjct: 292 FKCGSARIARLVFKGMRSKT--VVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVT 349
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+ VL AC + G +++ + ++ D L ++ + + R+D A + L
Sbjct: 350 MMGVLLACANLGDLERGWFVHKLL-DKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNL 408
Query: 314 PEPTVSVYHSLLG 326
+ V+ +LG
Sbjct: 409 EKTNVTWNAMILG 421
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 137/297 (46%), Gaps = 16/297 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G + +A +FE H K D ++ M+ G+++ +A F +M + +
Sbjct: 93 GSNSEAARVFE---HVELKLD-VLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDY 148
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+L C + LK G+E HG +I + + TA++S+Y KC Q A + F++ +
Sbjct: 149 ACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQH 208
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG--HAGHVDK 269
K D W +++GY +NG + A+++ MQ+ KP+S + V++L A A + +
Sbjct: 209 K--DLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGR 266
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
++ + G + ++D+ + G AR + + + TV +++++
Sbjct: 267 SIHGYAFRS---GFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDG-- 321
Query: 330 CHLNSDLGEEMAMKLQEM-EPENPTPFVILSNIY--AGLGRWEDVGRIRQMINDRQL 383
C N + E A L+ + E E PT ++ + A LG E + ++++ +L
Sbjct: 322 CAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKL 378
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 209/386 (54%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L L G QVH +++ +D + + LVDMY KCG + A
Sbjct: 413 QPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARI 472
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D WNSMISG +
Sbjct: 473 IFNRMT------------------------------------ERDVVCWNSMISGLAIHS 496
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF F++M+ GM+P+ S++++CA LS++ G++ H +++ +++ + +
Sbjct: 497 LNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGS 556
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR FFD K + WN MI GY +NG E AV++F+ M +
Sbjct: 557 ALIDMYAKCGNMDDARVFFDCMVTK--NIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQ 614
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+AVL+ C H+G VD+A+ F M+ +G+ P EH+ C++D LGR+GRL E
Sbjct: 615 RPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVE 674
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
LI +P +P V+ LL AC H N++LGE A L ++P+NP+P+V+LSNIYA
Sbjct: 675 ALIDNMPCKDDPI--VWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYAS 732
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R +++ R + K G S
Sbjct: 733 LGRHGDASGVRALMSSRGVVKGRGYS 758
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 173/394 (43%), Gaps = 49/394 (12%)
Query: 8 EPNSVTFI--SVISACAS----LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+P +V+ + S ACAS + + G+ +H L ++ SD +G +L+DMY KC
Sbjct: 240 DPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQ 299
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------ 115
+ A VF L + +WN +I G G KA+E+ + G +P+ T
Sbjct: 300 MDEAVKVFDSLPNISTV-SWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLA 358
Query: 116 -------------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
WN+++SG+ Q + + +LF +MQ + P
Sbjct: 359 SCIKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTT 418
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ +LS+C+ L L LG + H +R L+ D +A+ L+ MY KCGQ AR F++
Sbjct: 419 LAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMT 478
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ D WN+MISG + E A + F M+ + P +S+ +++++C V +
Sbjct: 479 ER--DVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQG 536
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
QI + D G ++D+ + G +D+AR + + ++ ++
Sbjct: 537 RQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHG--- 592
Query: 331 HLNSDLGEEMA-----MKLQEMEPENPTPFVILS 359
+ + GE+ M E P+ T +L+
Sbjct: 593 YAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLT 626
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 161/359 (44%), Gaps = 78/359 (21%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T SV+SAC ++ L GR+ HGL +K+ + + AL+ MY KCG + A +
Sbjct: 138 PTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRL 197
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + S N +++ M+ G++ G + A+ LF + G + DP +S++ +Q
Sbjct: 198 FDGM-ASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQ--- 253
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD----LSALKLGKETHGHVIRADLNKDES 184
ACA + A +LG+ H ++R D+
Sbjct: 254 ----------------------------ACASEFDVVRAFRLGQCIHALIVRKGFGSDQH 285
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +LI MY KC Q A + FD P+ WN +I+G+G+ G Y A+E+ +LM+
Sbjct: 286 VGNSLIDMYTKCMQMDEAVKVFDSL---PNISTVSWNILITGFGQAGSYAKALEVLNLME 342
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +PN ++ +L++C +K + D+L
Sbjct: 343 ESGSEPNEVTYSNMLASC---------------------IKAR--------DVL------ 367
Query: 304 DEARELIRELPEPTVSVYHSLL-GACWCHLNSDLGEEM-AMKLQEMEPENPTPFVILSN 360
AR + ++ P+V+ +++LL G C L+ D E M+ Q ++P+ T VILS+
Sbjct: 368 -SARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSS 425
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 162/349 (46%), Gaps = 28/349 (8%)
Query: 44 SDTMIGTALVDMYLKCGCLPC-AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+DT + LV++Y G LPC A F+ L N ++N ++ G + A L +
Sbjct: 41 ADTFLINRLVELYSVSG-LPCDALRAFRSLP-RPNAYSYNAALSAARRAGDLDAARALLD 98
Query: 103 GLAHEGFKPDP--ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
+ PD +WN++I+ ++ EA +L+E M G+VP+ + SVLSAC
Sbjct: 99 EM------PDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGA 152
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
++AL G+ HG ++ L+++ + AL+ MY KCG A R FD P++ +F
Sbjct: 153 VAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMA-SPNEVSF-T 210
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG----HVDKALQI--- 273
AM+ G + G + A+ +F M + V+ + + +VL +C A V +A ++
Sbjct: 211 AMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQC 270
Query: 274 --FTMMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
++ FG +H G ++D+ + ++DEA ++ LP + ++ L+ +
Sbjct: 271 IHALIVRKGFG---SDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITG-FG 326
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
S + L E P V SN+ A + DV R M +
Sbjct: 327 QAGSYAKALEVLNLMEESGSEPNE-VTYSNMLASCIKARDVLSARAMFD 374
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 209/394 (53%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR TL E ++ TA+V Y + G + A +F E+ RN ++W M
Sbjct: 184 YCQVGRVDEARTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLF-EVMPERNEVSWTAM 242
Query: 85 IAGMMLNGRSEKAMELFE---------------GLAHEGF------------KPDPATWN 117
+ G + GR E A ELF G +G + D TW+
Sbjct: 243 LFGYIQAGRIEDAEELFNAMPDHPLAACNGMIVGFGQQGMVDAAKSVFDRMCERDDGTWS 302
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
++I + Q EA F +M G+ P+ V S+L+ CA L+ L G+E HG ++R
Sbjct: 303 AIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRR 362
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +ALI+MY+KCG A+R F FE P D WN+MI+GY ++G E A+
Sbjct: 363 SFDMDIYAVSALITMYIKCGNLDKAKRVFHMFE--PKDVVMWNSMITGYAQHGLGEEALH 420
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IFD M+ + P+ +++ L+AC + G V + IF M G+KP EH+ CMVDLL
Sbjct: 421 IFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLL 480
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+G +DEA LI+ +P EP ++ +L+GAC H N+++ E A KL E+EP N P+V
Sbjct: 481 GRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLLELEPGNAGPYV 540
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS+IY GRWED +R+ I+ R L K G S
Sbjct: 541 LLSHIYTSSGRWEDASNMRKFISSRHLNKSLGCS 574
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + IS+++ CA+L L +GR+VHG L+ D +AL+ MY+KCG L A
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKR 389
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++++ WN+MI G +G E+A+ +F+ + G PD T+ ++ S G
Sbjct: 390 VFHMFE-PKDVVMWNSMITGYAQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTG 448
Query: 128 MRFEAFKLFEKMQS-TGMVPSLK---CVTSVL 155
E +F M++ +G+ P L+ C+ +L
Sbjct: 449 KVKEGRDIFNSMRTKSGIKPGLEHYACMVDLL 480
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 153/364 (42%), Gaps = 32/364 (8%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGL---TLKIEKQ---SDTMIGTALVDM 55
+ L D ++ I + S L G HGL +++ +Q + + T L+
Sbjct: 93 RHTLPDAAAALATIPYPPSVVSFTSLLRGYVRHGLLADAIQLFRQMPERNHISYTVLLGG 152
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
+L G + A +F E+ +++++ W M++G GR ++A LF+ E K + +
Sbjct: 153 FLDAGRVDEARKLFDEMP-AKDVVAWTAMLSGYCQVGRVDEARTLFD----EMPKRNVVS 207
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
W +M+SG++Q G A KLFE M V + + A A +L H +
Sbjct: 208 WTAMVSGYAQNGQVNLARKLFEVMPERNEVSWTAMLFGYIQAGRIEDAEELFNAMPDHPL 267
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
A +I + + G A+ FD+ + D W+A+I Y +N A
Sbjct: 268 AA--------CNGMIVGFGQQGMVDAAKSVFDRMCER--DDGTWSAIIKAYEQNEFLMEA 317
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMV 294
+ F M ++PN S +++L+ C +D ++ M+ F + ++
Sbjct: 318 LSTFREMLHIGIRPNYPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYA--VSALI 375
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQEMEP 349
+ + G LD+A+ + V +++S++ H LGEE M+L M P
Sbjct: 376 TMYIKCGNLDKAKRVFHMFEPKDVVMWNSMITGYAQH---GLGEEALHIFDDMRLAGMVP 432
Query: 350 ENPT 353
+ T
Sbjct: 433 DGIT 436
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 38/266 (14%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G + A F+ + R ++N ++AG N + A+ +F H D A++N
Sbjct: 29 RTGNMEGARATFEAMP-LRTTASYNALLAGYFRNHLPDAALRVF----HRMPTRDLASYN 83
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG----- 172
++ISG S L + + +P V S ++L G HG
Sbjct: 84 ALISGLS-----LRRHTLPDAAAALATIPYPPSVVS-------FTSLLRGYVRHGLLADA 131
Query: 173 -HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ R ++ T L+ ++ G+ AR+ FD+ K D W AM+SGY + G
Sbjct: 132 IQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAK--DVVAWTAMLSGYCQVGR 189
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ A +FD E K N S+ A++S G V+ A ++F +M P++
Sbjct: 190 VDEARTLFD----EMPKRNVVSWTAMVSGYAQNGQVNLARKLFEVM-------PERNEVS 238
Query: 292 CMVDLLG--RSGRLDEARELIRELPE 315
L G ++GR+++A EL +P+
Sbjct: 239 WTAMLFGYIQAGRIEDAEELFNAMPD 264
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 213/394 (54%), Gaps = 17/394 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T VI CA L +Q G+Q+HGL LKI SD + +LV+MY KCG + CA V
Sbjct: 113 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 172
Query: 69 FQELKGSR----------NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
F + N+++WN MI G M +G + A+ELF + D TWN
Sbjct: 173 FDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMP----IWDLVTWNL 228
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI+G+ G +A K+F M G PS + SVLSA + L+ L G+ H ++ +
Sbjct: 229 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 288
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D + T+LI MY KCG A F I+ W A+I G G +G A+ +
Sbjct: 289 FELDGILGTSLIEMYAKCGCIESALTVFRA--IQKKKVGHWTAIIVGLGIHGMANHALAL 346
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M + +KPN+ F+ VL+AC HAG VD Q F MM +++ ++P EH+GC+VD+L
Sbjct: 347 FLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILC 406
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+G L+EA+ I +P P ++ SLLG H D+GE A ++ E+ PE +++
Sbjct: 407 RAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYIL 466
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
LSN+YA G WE V +R+M+ R K PG S+
Sbjct: 467 LSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSS 500
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 140/303 (46%), Gaps = 14/303 (4%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYL--KCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
Q+H +LK + + + L+ +Y K L A ++F ++ R+++ WNT+I +
Sbjct: 34 QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQ-RRSLIHWNTIIKCYV 92
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
N S + LF L HE + PD T +I G ++LG+ E ++ G +
Sbjct: 93 ENQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 151
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-------TALISMYMKCGQPSWA 202
S+++ + + ++ +I D+ S+ A+I+ YMK G A
Sbjct: 152 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSA 211
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
F Q I D WN MI+GY NG++ AV++F +M + +P+ A+ V+VLSA
Sbjct: 212 LELFYQMPIW--DLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 269
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
+ K I + M+ + G + ++++ + G ++ A + R + + V +
Sbjct: 270 GLAVLGKGRWIHSYMEKN-GFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWT 328
Query: 323 SLL 325
+++
Sbjct: 329 AII 331
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 85/165 (51%), Gaps = 5/165 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P+ T +SV+SA + L L GR +H K + D ++GT+L++MY KCGC+
Sbjct: 252 LGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIES 311
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF+ ++ + + W +I G+ ++G + A+ LF + G KP+ + +++ +
Sbjct: 312 ALTVFRAIQ-KKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACN 370
Query: 125 QLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALK 165
G+ + + F+ M + + P+L+ C+ +L L K
Sbjct: 371 HAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAK 415
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/390 (37%), Positives = 213/390 (54%), Gaps = 45/390 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCLPC 64
P+ T +SV+SACA ++ GRQVH + S I AL+D+Y KCG +
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV-- 251
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
E A LFEGL+ + D +WN++I G++
Sbjct: 252 ------------------------------ETAFGLFEGLSCK----DVVSWNTLIGGYT 277
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--DLNKD 182
+ EA LF++M +G P+ + SVL ACA L A+ +G+ H ++ + + +
Sbjct: 278 HTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNE 337
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S+ T+LI MY KCG A + F+ + + WNAMI G+ +G +A ++F M
Sbjct: 338 TSLRTSLIDMYAKCGDIEAAHQVFNSMLYR--SLSSWNAMIFGFAMHGRANAAFDLFSRM 395
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ +V+P+ +FV +LSAC H+G +D QIF M D+ L PK EH+GCM+DLLG SG
Sbjct: 396 RGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGL 455
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EA E+I +P EP ++ SLL AC H N +L E A KL ++EPEN +V+LSNI
Sbjct: 456 FKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNI 515
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA GRWEDV R+R ++N + + K+PG S+
Sbjct: 516 YATAGRWEDVARVRGVLNGKGMKKVPGCSS 545
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 20/386 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS +F ++ +CA + GRQ+H LK+ D + T+L+ MY + G L A V
Sbjct: 62 PNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKV 121
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R++++ +I G G A ++F+ + + D +WN+MI+G+ + G
Sbjct: 122 F-DASSHRDVVSCTALITGYASRGDFRSARKVFDEIT----ERDVVSWNAMITGYVENGR 176
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD----LNKDES 184
EA +LF++M T + P + SV+SACA +++LG++ H V D +
Sbjct: 177 YEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLK 236
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ALI +Y KCG A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 237 IVNALIDLYSKCGDVETAFGLFEGLSCK--DVVSWNTLIGGYTHTNLYKEALLLFQEMLR 294
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRL 303
PN + ++VL AC H G +D I +D G+ + ++D+ + G +
Sbjct: 295 SGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDI 354
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI 361
+ A ++ + ++S +++++ H ++ ++ M+ +EP++ T +LS
Sbjct: 355 EAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSAC 414
Query: 362 -YAGLGRWEDVGR--IRQMINDRQLT 384
++GL D+GR + M D LT
Sbjct: 415 SHSGL---LDLGRQIFKSMTQDYNLT 437
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 151/323 (46%), Gaps = 44/323 (13%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
A+ +FE + +P+ WN+M+ G + A +++ +M S G +P+ +L
Sbjct: 17 AISVFETIQ----EPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLK 72
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF------- 209
+CA A + G++ H V++ D + T+LISMY + G AR+ FD
Sbjct: 73 SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132
Query: 210 ----------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
EI D WNAMI+GY NG YE A+E+F M + V
Sbjct: 133 CTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNV 192
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM---DDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+P+ + V+V+SAC +G ++ Q+ + + DDD G + ++DL + G ++
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNI- 361
A L L V +++L+G + +++L +E + QEM E P +LS +
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGG---YTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309
Query: 362 -YAGLGRWEDVGRIRQMINDRQL 383
A LG D+GR + D++L
Sbjct: 310 ACAHLGAI-DIGRWIHVYIDKKL 331
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 215/383 (56%), Gaps = 11/383 (2%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT + V+SACA + L+FGR+V + + + A++DMY KCG + A +F
Sbjct: 235 VTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 294
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
++ N+ TW TM+ G ++ E A E+ + K D WN++IS + Q G E
Sbjct: 295 MEEKDNV-TWTTMLDGYAISEDYEAAREVLNAMP----KKDIVAWNALISAYEQNGKPNE 349
Query: 132 AFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A +F ++Q + L +T S LSACA + AL+LG+ H ++ + + + + +AL
Sbjct: 350 ALLVFHELQLQKNI-KLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSAL 408
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG AR F+ E + D W+AMI G +G AV++F MQ+ VKP
Sbjct: 409 IHMYSKCGDLEKAREVFNSVEKR--DVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKP 466
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F V AC H G VD+A +F M+ +G+ P+ +H+ C+VD+LGRSG L++A +
Sbjct: 467 NGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKF 526
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P P+ SV+ +LLGAC H N L E +L E+EP N V+LSNIYA G+W
Sbjct: 527 IEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKW 586
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
++V +R+ + L K PG S+
Sbjct: 587 DNVSELRKHMRVTGLKKEPGCSS 609
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 164/368 (44%), Gaps = 67/368 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +I A A + L G+ +HG+ +K SD + +L+ Y CG L A V
Sbjct: 131 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKV 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K +++++WN+MI G + G +KA+ELF
Sbjct: 191 FTTIK-EKDVVSWNSMINGFVQKGSPDKALELF--------------------------- 222
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+KM+S + S + VLSACA + L+ G+ ++ +N + ++A A
Sbjct: 223 --------KKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANA 274
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-----------------------------DPAFW 219
++ MY KCG A+R FD E K + D W
Sbjct: 275 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAW 334
Query: 220 NAMISGYGRNGEYESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
NA+IS Y +NG+ A+ +F +Q Q+ +K N + V+ LSAC G ++ I + +
Sbjct: 335 NALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIK 394
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+ G+K ++ + + G L++ARE+ + + V V+ +++G H
Sbjct: 395 KN-GIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453
Query: 339 EMAMKLQE 346
+M K+QE
Sbjct: 454 DMFYKMQE 461
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 107/273 (39%), Gaps = 54/273 (19%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATAL--ISMYMKCGQPSWARRFFDQFE 210
S++ C+ L LK +TH H+IR + D A+ L I+ +AR+ FD E
Sbjct: 36 SLIDRCSSLRQLK---QTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFD--E 90
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQE-KVKPNSASF-------------- 254
I + WN +I Y + ++ F D++ E + PN +F
Sbjct: 91 IPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLS 150
Query: 255 -------VAVLSACG--------------HAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+A+ SA G G +D A ++FT + + + + M
Sbjct: 151 LGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS-----WNSM 205
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYH----SLLGACWCHLNSDLGEEMAMKLQEMEP 349
++ + G D+A EL +++ V H +L AC + + G + ++E
Sbjct: 206 INGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRV 265
Query: 350 E-NPTPFVILSNIYAGLGRWEDVGRIRQMINDR 381
N T + ++Y G ED R+ + ++
Sbjct: 266 NVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 298
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 222/379 (58%), Gaps = 8/379 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+S L G+ +HG +K ++ + +L+ +Y K G + A +F E+K ++
Sbjct: 277 VLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIK-TK 335
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLA----HEGFKPDPATWNSMISGFSQLGMRFEA 132
NI++WN +I+ G ++A +F L + +P+ +W+++I GF+ G EA
Sbjct: 336 NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEA 395
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ + + + SVLS CA+L+AL LG+E HGHV+R+ ++ + + LI+M
Sbjct: 396 LELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINM 455
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y K G F++ E K D WN M++GYG +G E+A+ FD M ++ +P+
Sbjct: 456 YTKSGSFKEGNLVFEKIENK--DLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGV 513
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FVAVLSAC HAG V + ++F M +F ++P+ EH+ CMVDLLGR+G L EA ++++
Sbjct: 514 TFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKS 573
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP V+ +LL +C H N+++ EE A ++ + E +++LSNIYA GRWED
Sbjct: 574 MPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYAASGRWEDS 633
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R + L K PG S
Sbjct: 634 AKVRISAKTKGLKKTPGQS 652
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 142/279 (50%), Gaps = 11/279 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L + TF VI ACA + + R VHG +++ Q + +G L+ MY K G +
Sbjct: 129 LGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF+ + R+ ++WNTM++G LN A E+F + G +P+ TW S++S +
Sbjct: 189 ARKVFERM-AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHA 247
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G E +LF +M+ G+ + + + VLS DL+A GK HG+V++
Sbjct: 248 RCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLF 307
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI +Y K G + AR F EIK + WNA+IS Y G + A IF +Q
Sbjct: 308 VKNSLICLYGKHGNVNAARILF--LEIKTKNIVSWNALISSYADLGWCDEAFAIF--LQL 363
Query: 245 EK------VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
EK V+PN S+ AV+ G ++AL++F M
Sbjct: 364 EKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRM 402
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ NSVT SV+S CA L L GR++HG ++ + ++G L++MY K G +
Sbjct: 408 KANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNL 467
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ ++++++WNTM+AG ++G E A+ F+ + +GF+PD T+ +++S S G
Sbjct: 468 VFEKIE-NKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAG 526
Query: 128 MRFEAFKLFEKM 139
+ E +LF+KM
Sbjct: 527 LVAEGRELFDKM 538
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 147/349 (42%), Gaps = 48/349 (13%)
Query: 28 QFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ--ELKGSRNILTWNTMI 85
+Q+H + + +V +Y G + A VF+ ++ N+L WN+++
Sbjct: 48 HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIECFSNLLLWNSIL 107
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
+ +G E+A+E++ + G D GF+ F L
Sbjct: 108 RANVAHGYCEEALEIYCRMRKLGVSAD---------GFT--------FPL---------- 140
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
V+ ACA + + KL + HGHV+ + + L+ MY K G+ AR+
Sbjct: 141 --------VIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKV 192
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
F++ ++ WN M+SGY N + A E+F +M ++PN ++ ++LS+ G
Sbjct: 193 FERMAVRS--CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCG 250
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL----IRELPEPTVSVY 321
+ +++F M G+ E ++ + DE + + ++ E + V
Sbjct: 251 QHVETMELFGRMRMR-GIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVK 309
Query: 322 HSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+SL+ H N + + + E++ +N + L + YA LG W D
Sbjct: 310 NSLICLYGKHGNVNAARILFL---EIKTKNIVSWNALISSYADLG-WCD 354
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 217/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S + +SAC L GR VHG+ + E SD ++G AL+DMY + G + A +
Sbjct: 100 RPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACS 159
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ +++ +W +++ G + E A +F+ + + +W +MI+G+ Q
Sbjct: 160 VFKTME-IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMR----NSVSWTAMITGYVQGE 214
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ +LF++M++ G P++ + +VLS CAD+ A LG HG+V + +L+ D ++
Sbjct: 215 VPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVN 274
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY K G A + F E+ D W MISG +G+ A+E F M +
Sbjct: 275 NALMDMYAKSGALVLALKIFQ--EMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSG 332
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN + ++VLSAC HAG V + +F M G+KPK +H+GCMVDLLGR+G L EA
Sbjct: 333 VVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREA 392
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ELI +P +P ++ SLL AC H N L E + E+EP++ +++L NIY
Sbjct: 393 KELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSA 452
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RWED + R+ + DR++ K PG S
Sbjct: 453 SRWEDALKARKAMRDRRVKKKPGCS 477
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D P +T ++V+S CA + G VHG K D + AL+DMY K G L A
Sbjct: 232 DWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLAL 291
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+FQE+ R++ +W TMI+G+ L+G+ A+E F ++ G P+ T S++S S
Sbjct: 292 KIFQEMP-KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHA 350
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ E LF+KM Q G+ P ++ ++ L+ KE H+ + D +
Sbjct: 351 GLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM---PIKPDSVI 407
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+L+S + G + A E++PDD + + + Y +E A++ M+
Sbjct: 408 WRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRD 467
Query: 245 EKVK 248
+VK
Sbjct: 468 RRVK 471
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 86/361 (23%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHG--LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
N+ TF ++ C SL L +Q+HG +TL + + L++ Y + G A
Sbjct: 2 NTQTFYFLLQKCGSLEKL---KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +I++W +I+ + + KA +F L H G +PD
Sbjct: 59 VFNHIQNP-DIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSF------------- 104
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
CV +SAC L G+ HG V R +L D +
Sbjct: 105 ----------------------CVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGN 142
Query: 188 ALISMY-------------------------------MKCGQPSWARRFFDQFEIKPDDP 216
ALI MY +KC ARR FD+ ++ +
Sbjct: 143 ALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMR--NS 200
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIF- 274
W AMI+GY + +E+F M+ E K P + VAVLS C G D +
Sbjct: 201 VSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHG 260
Query: 275 ----TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
T +D D + ++D+ +SG L A ++ +E+P+ V + +++
Sbjct: 261 YVNKTNLDLDVTVN------NALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLAL 314
Query: 331 H 331
H
Sbjct: 315 H 315
>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Vitis vinifera]
Length = 677
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 224/417 (53%), Gaps = 33/417 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS P+ +T V+ + A+L+ + GR +HG +K+ + D+ + +LVDMY+K G L
Sbjct: 132 LSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGF 191
Query: 65 AHNVFQE---LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL----------------- 104
+F E + +IL WN +I G G KA LFE +
Sbjct: 192 GLQLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPERNAGSWNSLINGFVR 251
Query: 105 ------AHEGFKPDP----ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
A E F P +W +MI+GFSQ G +A +F +M G+ P+ V S
Sbjct: 252 NGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSA 311
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L AC + AL++G+ H ++ + + TAL+ MY KCG A R F E K
Sbjct: 312 LLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVF--VETKGK 369
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W+ MI G+ +G ++ A++ F M+ + P+ F+A+L+AC H+G+VD+ L F
Sbjct: 370 DLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFF 429
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M D+ ++P +H+ +VDLLGR+GRLDEA I+ +P P ++ +L AC H N
Sbjct: 430 ESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKN 489
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ E A KL ++EP++P +V LSN+YA +GRWEDV R+R ++ +R + K PG S
Sbjct: 490 IEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWS 546
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTS 153
+ A+ +F H P+ +N++I G ++ RFE + F M + P +
Sbjct: 89 DYALSIFRCFDH----PNLFVFNALIRGLAE-NSRFEGSVSHFVLMLRLSIRPDRLTLPF 143
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF--EI 211
VL + A L + LG+ HG V++ L D + +L+ MY+K G+ + + FD+
Sbjct: 144 VLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRN 203
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
K + WN +I+G + G+ A +F+ M + N+ S+ ++++ G +D+A
Sbjct: 204 KAESILLWNVLINGCCKVGDLSKAASLFEAMPER----NAGSWNSLINGFVRNGDLDRAR 259
Query: 272 QIFTMMDD 279
++F M +
Sbjct: 260 ELFVQMPE 267
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 217/384 (56%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACA+L L+ G ++H +LK+ ++ + ++L+DMY KC A
Sbjct: 379 RPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQT 438
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++ +G NG+ +AM LF+ + A+WN++ISG++Q
Sbjct: 439 IFDTLP-EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNL----ASWNTIISGYAQNR 493
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + F M ++G VP +SVL ACA+L +L GK H I+ + + + T
Sbjct: 494 QFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGT 553
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F Q + D W AMI G NG E ++ +F+ M +
Sbjct: 554 ALSDMYAKSGDLQSSKRMFYQMPERND--VTWTAMIQGLAENGLAEESILLFEDMMATGM 611
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H G V++A+ F M +G+ PK++H+ CMVD+L R+GRL EA
Sbjct: 612 TPNEHTFLALLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAE 670
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ + P + + + +LL AC + N ++GE A +L E+ +N +V+LSN+YA G
Sbjct: 671 ALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCG 730
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D RIR ++ L K G S
Sbjct: 731 RWKDAARIRVLMKGTTLKKDGGCS 754
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 49/382 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
PN +TF+ +I AC + G +K +S + +L+ +YL+ G A
Sbjct: 246 RPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAAR 305
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +++++W ++ +G + A + + + + +W ++I+ Q
Sbjct: 306 KVFDEMD-VKDVVSWTALLDVYSESGDLDGARRVLDAMPER----NEVSWGTLIARHEQR 360
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA KL+ +M + G P++ C +SVLSACA L L+ G H ++ + + ++
Sbjct: 361 GNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVS 420
Query: 187 TALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPA 217
++LI MY KC + A+ FD ++ + A
Sbjct: 421 SSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLA 480
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKALQ 272
WN +ISGY +N ++ A+ F+ M P +F +VL AC + G + A
Sbjct: 481 SWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKT 540
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
I M++ + + D+ +SG L ++ + ++PE + +++
Sbjct: 541 IKLGMEESIFIGT------ALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGL---A 591
Query: 333 NSDLGEEMAMKLQEMEPENPTP 354
+ L EE + ++M TP
Sbjct: 592 ENGLAEESILLFEDMMATGMTP 613
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + R+++++ TM+ +M GR +A+EL+E +
Sbjct: 158 MVHEHVKAGDIASARGLFDGMP-ERSVVSYTTMVDALMKRGRVAEAVELYE----QCPSG 212
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + + ISGF + + A +F KM S G+ P+ ++ AC L
Sbjct: 213 SVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIV 272
Query: 172 GHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G I+++ + + +LI++Y++ G + AR+ FD+ ++K D W A++ Y +G
Sbjct: 273 GSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK--DVVSWTALLDVYSESG 330
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ + A + D M + N S+ +++ G+ +A+++++ M D G +P +
Sbjct: 331 DLDGARRVLDAMPER----NEVSWGTLIARHEQRGNAAEAVKLYSQMLAD-GCRP---NI 382
Query: 291 GCMVDLLGRSGRLDEAR 307
C +L L++ R
Sbjct: 383 SCFSSVLSACATLEDLR 399
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G+ + A ++Q AF+ A ISG+ RN + +A+ +F M
Sbjct: 187 TTMVDALMKRGRVAEAVELYEQ--CPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCG 244
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +FV ++ AC AG A+ I + E ++ L R G A
Sbjct: 245 VRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAA 304
Query: 307 RELIRELPEPTVSVYHSLL 325
R++ E+ V + +LL
Sbjct: 305 RKVFDEMDVKDVVSWTALL 323
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 223/384 (58%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T S++ ACA L LQ+G+++HG L+ ++D +GT+L+ Y+ CG A
Sbjct: 448 QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARV 507
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +K +N+++W N+MISG+SQ G
Sbjct: 508 LFDRMK-DKNLVSW-----------------------------------NAMISGYSQNG 531
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +E+ LF K S G+ + SV AC+ LSAL+LGKE HG+V++A +D +
Sbjct: 532 LPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGC 591
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I MY K G +R+ FD +K + A WNA+I +G +G + A+E+++ M++
Sbjct: 592 SIIDMYAKSGCIKESRKVFDG--LKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQ 649
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +++ +L ACGHAG V++ L+ F M + ++PK EH+ C++D+L R+GRLD+A
Sbjct: 650 MPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDAL 709
Query: 308 ELIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ E+PE + ++ SLL +C ++GE++A KL E+EP+ +V+LSN+YAGLG
Sbjct: 710 RLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLG 769
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V R+RQM+ + L K G S
Sbjct: 770 KWDGVRRVRQMMKEIGLQKDAGCS 793
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 159/335 (47%), Gaps = 62/335 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N VT ++V+ AC L L+ +++HG + + Q + A + Y KCG L A
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH-VELSNAFILAYAKCGALNSAEK 406
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G + + ++WN++I G +Q G
Sbjct: 407 VFHGI-GDKTV-----------------------------------SSWNALIGGHAQNG 430
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A L +M +G P ++S+L ACA L +L+ GKE HG+V+R L D + T
Sbjct: 431 DPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGT 490
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+S Y+ CG+ S AR FD+ +K + WNAMISGY +NG ++ +F E +
Sbjct: 491 SLLSHYIHCGKASSARVLFDR--MKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGI 548
Query: 248 KPNSASFVAVLSACGHA----------GHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDL 296
+ + + V+V AC G+V KALQ +D F GC ++D+
Sbjct: 549 QSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQT----EDAF--------VGCSIIDM 596
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+SG + E+R++ L + V+ +++++ A H
Sbjct: 597 YAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIH 631
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 155/329 (47%), Gaps = 55/329 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ TF SVI AC +L ++ G +HG+ +K+ D +G ALV MY KCG +
Sbjct: 143 QPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAV----- 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQ 125
++AM++F+ F P+ +WNSMI FS+
Sbjct: 198 ---------------------------DEAMKVFD------FMPETNLVSWNSMICAFSE 224
Query: 126 LGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G ++F L E + G++P + V ++L CA + +G HG ++ L+++
Sbjct: 225 NGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVM 284
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-- 242
+ A++ MY KCG + A+ F + K + WN MIS + G+ A + M
Sbjct: 285 VNNAMVYMYSKCGYLNEAQMSFVKNNNK--NVVSWNTMISAFSLEGDVNEAFNLLQEMQI 342
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHF---GCMVDLLG 298
Q E++K N + + VL AC +DK LQ+ ++ + + + +H +
Sbjct: 343 QGEEMKANEVTILNVLPAC-----LDK-LQLRSLKELHGYSFRHCFQHVELSNAFILAYA 396
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ G L+ A ++ + + TVS +++L+G
Sbjct: 397 KCGALNSAEKVFHGIGDKTVSSWNALIGG 425
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT ++++ CA + G +HGL +K+ + M+ A+V MY KCG L A
Sbjct: 246 PDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMS 305
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++N+++WNTMI S FS G
Sbjct: 306 FVK-NNNKNVVSWNTMI-----------------------------------SAFSLEGD 329
Query: 129 RFEAFKLFEKMQSTG--MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EAF L ++MQ G M + + +VL AC D L+ KE HG+ R E ++
Sbjct: 330 VNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LS 388
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A I Y KCG + A + F I + WNA+I G+ +NG+ A+ + M
Sbjct: 389 NAFILAYAKCGALNSAEKVFHG--IGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSG 446
Query: 247 VKPNSASFVAVLSACGH 263
+P+ + ++L AC H
Sbjct: 447 QQPDWFTISSLLLACAH 463
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 156/352 (44%), Gaps = 52/352 (14%)
Query: 17 VISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++ AC + ++ GR++H ++ ++D ++ T L+ MY CG + VF ++ +
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNME-T 107
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N++ WN +++SG+++ G+ + K+
Sbjct: 108 KNLIQWN-----------------------------------ALVSGYTRNGLYGDVVKV 132
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F + S T P SV+ AC + ++LG+ HG VI+ L D + AL+ MY
Sbjct: 133 FMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYG 192
Query: 195 KCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSA 252
KCG A + FD P+ + WN+MI + NG + ++ +++ +E + P+
Sbjct: 193 KCGAVDEAMKVFD---FMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVV 249
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V +L C G VD + I + GL + MV + + G L+EA+ +
Sbjct: 250 TVVTILPVCAGEGEVDIGMGIHGLA-VKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVK 308
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGE------EMAMKLQEMEPENPTPFVIL 358
V +++++ A L D+ E EM ++ +EM+ T +L
Sbjct: 309 NNNKNVVSWNTMISA--FSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVL 358
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 218/384 (56%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F + ACASL + G+ +H K SD TAL+DMY K G L A +
Sbjct: 80 PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQL 139
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+I TWN++IAG +G E A+ELF + + +W ++ISG++Q G
Sbjct: 140 FDEMP-VRDIPTWNSLIAGYARSGHMEAALELFNKMPVR----NVISWTALISGYAQNGK 194
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F +++ G P+ + SVL AC+ L AL +GK + K+ ++
Sbjct: 195 YAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSN 254
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ ++ +CG A++ FD+ K + + WN MI G +G A++++D M K+
Sbjct: 255 AVLELHARCGNIEEAQQVFDEIGSKRNLCS-WNTMIMGLAVHGRCIDALQLYDQMLIRKM 313
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV +L AC H G V + Q+F M+ F + PK EH+GC+VDLLGR+G L EA
Sbjct: 314 RPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAY 373
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P P ++ +LLGAC H N +LGE A L ++EP NP +VILSNIYA G
Sbjct: 374 NLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAG 433
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W V R+R+M+ +TK G S
Sbjct: 434 DWSGVARLRKMMKGGHITKRAGYS 457
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP +N I FS +G + L+ +M S G P+ T + ACA L + G+
Sbjct: 44 KPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQM 103
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H H ++ D TAL+ MY K G AR+ FD+ ++ D WN++I+GY R+
Sbjct: 104 LHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVR--DIPTWNSLIAGYARS 161
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E+A+E+F+ M N S+ A++S G KAL++F ++++ G KP +
Sbjct: 162 GHMEAALELFNKMPVR----NVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVS 217
Query: 290 FGCMVDLLGRSGRLDEAREL 309
++ + G LD + +
Sbjct: 218 IASVLPACSQLGALDIGKRI 237
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN V+ SV+ AC+ L L G+++ + + A+++++ +CG + A
Sbjct: 212 KPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQ 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ RN+ +WNTMI G+ ++GR A++L++ + +PD T+ ++ + G
Sbjct: 272 VFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGG 331
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADL 161
M E +LFE M+S V P L+ C+ +L +L
Sbjct: 332 MVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGEL 369
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 204/379 (53%), Gaps = 38/379 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ ++ + AC L YL R+VH L +++ S+ + AL+ Y KC A VF EL
Sbjct: 222 SVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNEL 281
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
G K +WN+MI GF+Q +A
Sbjct: 282 -----------------------------------GNKKTRISWNAMILGFTQNECPEDA 306
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +MQ + P + SV+ A AD+S + HG+ IR L++D + TALI M
Sbjct: 307 ERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDM 366
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG+ S ARR FD + WNAMI GYG +G ++AVE+F+ M+ PN
Sbjct: 367 YSKCGRVSIARRLFDS--ARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNET 424
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F++VL+AC HAG VD+ + F M D+GL+P EH+G MVDLLGR+G+LDEA I+
Sbjct: 425 TFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKN 484
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP +SVY ++LGAC H N +L EE A + E+ PE V+L+NIYA W+DV
Sbjct: 485 MPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDV 544
Query: 372 GRIRQMINDRQLTKLPGIS 390
R+R + + L K PG S
Sbjct: 545 ARVRTAMEKKGLQKTPGWS 563
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 154/359 (42%), Gaps = 45/359 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF +++ CA+ L GR VH S+++ TAL +MY KC A V
Sbjct: 14 PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + D WN++++G+++ G+
Sbjct: 74 FDRMPSR------------------------------------DRVAWNAVVAGYARNGL 97
Query: 129 RFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
A + +MQ G P + SVL ACAD AL +E H +RA L++ +++
Sbjct: 98 PSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVS 157
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TA++ Y KCG AR FD ++ + WNAMI GY NG A+ +F M QE
Sbjct: 158 TAVLDAYCKCGAVEAARAVFDCMPVR--NSVSWNAMIDGYADNGNATEAMALFWRMVQEG 215
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V AS +A L ACG G++D+ ++ ++ GL ++ + R D A
Sbjct: 216 VDVTDASVLAALQACGELGYLDEVRRVHELL-VRVGLSSNVSVTNALITTYAKCKRADLA 274
Query: 307 RELIREL--PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
++ EL + +S +LG D E + ++Q +E P F ++S I A
Sbjct: 275 AQVFNELGNKKTRISWNAMILGFTQNECPED-AERLFARMQ-LENVRPDSFTLVSVIPA 331
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 150/353 (42%), Gaps = 51/353 (14%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ P+SVT +SV+ ACA L R+VH L+ + TA++D Y KCG + A
Sbjct: 115 ERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAAR 174
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + RN ++WN MI G NG + +AM LF + EG A+
Sbjct: 175 AVFDCMP-VRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDAS----------- 222
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
V + L AC +L L + H ++R L+ + S+
Sbjct: 223 ------------------------VLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVT 258
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI+ Y KC + A + F++ K + WNAMI G+ +N E A +F MQ E
Sbjct: 259 NALITTYAKCKRADLAAQVFNELGNKKTRIS-WNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 247 VKPNSASFVAVLSACGHAGHVDKA-----LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
V+P+S + V+V+ A +A I +D D + ++D+ + G
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYV------LTALIDMYSKCG 371
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
R+ AR L + V +++++ H G+ +EM+ P
Sbjct: 372 RVSIARRLFDSARDRHVITWNAMIHGYGSH---GFGQAAVELFEEMKGTGSLP 421
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 221/383 (57%), Gaps = 6/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN V + +ISAC + + G+Q HG+ ++ I ++ Y CG + A
Sbjct: 314 PNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQ 373
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F EL ++ +WN +I+G + NG E+A +LF+ + D +W+SMISG+SQ
Sbjct: 374 F-ELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPER----DVFSWSSMISGYSQNEQ 428
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF +M + G+ P+ + SV SA A L L G+ H +++ + ++++ A
Sbjct: 429 PDLALQLFHEMVAGGVQPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAA 488
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A + F + + + + WNA+I G +G ++++F +Q+ ++K
Sbjct: 489 LIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIK 548
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS +F+ VLSAC HAG VD + F M + + ++P +H+GCM+DLLGR+GRL EA E
Sbjct: 549 PNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAE 608
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+IR++P + V ++ +LL AC H N ++GE A L +++ + V+LSNIYA GR
Sbjct: 609 MIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGR 668
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+D +R+ + +++ K PG S
Sbjct: 669 WDDAFLVRRAMQSQRMKKSPGCS 691
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 154/300 (51%), Gaps = 14/300 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VT SVISA + + + R +H L+ K+ ++ ++ T LV MY C L A +
Sbjct: 182 PNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVHMYCVCSSLGNARVL 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN++TWN M+ G +G + A +LFE + + D +W ++I G+ Q+
Sbjct: 242 FDEIP-ERNVVTWNVMLNGYSKSGLVDLARDLFERIPAK----DVVSWGTIIDGYVQIER 296
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +++ M TG+ P+ + ++SAC A+ G++ HG ++R + + +
Sbjct: 297 LGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRTGFDCYDFIQAT 356
Query: 189 LISMYMKCGQPSWARRFFDQFEI-KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+I Y CG+ + A F QFE+ D + WNA+ISG+ RNG E A ++FD M + V
Sbjct: 357 IIHFYAACGEINLA---FLQFELGSKDHVSSWNALISGFVRNGMIEQARQLFDEMPERDV 413
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S+ +++S D ALQ+F M G++P + + + G L E R
Sbjct: 414 ----FSWSSMISGYSQNEQPDLALQLFHEMVAG-GVQPNEITMVSVFSAIATLGTLMEGR 468
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 176/425 (41%), Gaps = 76/425 (17%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+T +S + +C+SLL L G+Q+H L K S+ + +L+ Y+KC + A ++F
Sbjct: 53 LTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDT 112
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ ++ N M+AG + +G + A LFE + +G ++ +M+ G +Q E
Sbjct: 113 CS-VLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKG----CVSYTTMVMGLAQNNCWLE 167
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +F+ M+ G++P+ + SV+SA + + + + H + L +AT L+
Sbjct: 168 AIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALSFKLGLEALNIVATNLVH 227
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL---------- 241
MY C AR FD EI + WN M++GY ++G + A ++F+
Sbjct: 228 MYCVCSSLGNARVLFD--EIPERNVVTWNVMLNGYSKSGLVDLARDLFERIPAKDVVSWG 285
Query: 242 ---------------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------- 273
M + V PN V ++SACG V + Q
Sbjct: 286 TIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTMAVSEGQQFHGIIVRT 345
Query: 274 -----------------------FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ + G K + ++ R+G +++AR+L
Sbjct: 346 GFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALISGFVRNGMIEQARQLF 405
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGL--- 365
E+PE V + S++ + DL ++ M ++P T + S I A L
Sbjct: 406 DEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEITMVSVFSAI-ATLGTL 464
Query: 366 --GRW 368
GRW
Sbjct: 465 MEGRW 469
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T +SV SA A+L L GR H L + + AL+DMY KCG + A
Sbjct: 445 QPNEITMVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQ 504
Query: 68 VFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E++ ++ WN +I G+ ++G + +++LF L KP+ T+ ++S
Sbjct: 505 LFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHA 564
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK 149
G+ K F+ M++ + P++K
Sbjct: 565 GLVDTGEKYFKGMKNLYNIEPNIK 588
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 238/450 (52%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +T+++V+SAC SL L+ G+Q+H ++ E SD + TAL MY+KCG + A
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDARE 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
VF+ L +R+++ WNTMI G++ +G+ E+A +F + E PD T+
Sbjct: 303 VFECLP-NRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPG 361
Query: 117 ------------------------NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
N++I+ +S+ G +A ++F++M +V V
Sbjct: 362 GLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVG 421
Query: 153 S-------------------------------VLSACADLSALKLGKETHGHVIRADLNK 181
VL AC++ ALK GKE H V++A +
Sbjct: 422 GYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA 481
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D ++A AL+SMY KCG A R + + D WN +I G +NG A++ F++
Sbjct: 482 DLAVANALMSMYFKCGSVEDAIRVSEGMSTR--DVVTWNTLIGGLAQNGRGLEALQKFEV 539
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ E+++PN+ +FV V+SAC V++ + F M D+G+ P ++H+ CMVD+L R+G
Sbjct: 540 MKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAG 599
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L EA ++I +P +P+ +++ +LL AC H N ++GE+ A + ++EP+N +V LS
Sbjct: 600 HLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSF 659
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G W DV ++R+++ +R + K PG S
Sbjct: 660 IYAAAGMWRDVAKLRKLMKERGVKKEPGRS 689
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 41/320 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF+S++SAC+S L +GR+VH ++ ++ +G AL+ MY KCG + A
Sbjct: 142 EPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARR 201
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + SR+ ++W T+ +G ++++++ + + EG +P T+
Sbjct: 202 VFDAM-ASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITY----------- 249
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+VLSAC L+AL+ GK+ H ++ ++ + D ++T
Sbjct: 250 ------------------------MNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVST 285
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL MY+KCG AR + FE P+ D WN MI G +G+ E A +F M +E
Sbjct: 286 ALTKMYIKCGAVKDAR---EVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P+ +++A+LSAC G + +I D GL ++++ ++G + +A
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDA 401
Query: 307 RELIRELPEPTVSVYHSLLG 326
R++ +P+ V + +L+G
Sbjct: 402 RQVFDRMPKRDVVSWTALVG 421
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 148/325 (45%), Gaps = 51/325 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +S ++ ++ +C L G+QVH L+ + + I L+ +Y+ CG + A
Sbjct: 41 QVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARR 100
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + S K++ +WN MISG++ G
Sbjct: 101 LFDKF---------------------SNKSV---------------VSWNVMISGYAHRG 124
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF LF MQ G+ P S+LSAC+ +AL G+E H V+ A L + ++
Sbjct: 125 LGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGN 184
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALISMY KCG ARR FD + D W + Y +G + +++ + M QE V
Sbjct: 185 ALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGV 242
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------CMVDLLGRSG 301
+P+ +++ VLSACG ++K QI + + EH + + + G
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVES-------EHHSDVRVSTALTKMYIKCG 295
Query: 302 RLDEARELIRELPEPTVSVYHSLLG 326
+ +ARE+ LP V +++++G
Sbjct: 296 AVKDAREVFECLPNRDVIAWNTMIG 320
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 30/347 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N +T++ V+ AC++ + L++G+++H +K +D + AL+ MY KCG + A
Sbjct: 445 EANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIR 504
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V + + +R+++TWNT+I G+ NGR +A++ FE + E +P+ T+ +++S
Sbjct: 505 VSEGM-STRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRN 563
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + F M+ G+VP+ K C+ +L+ L E ++
Sbjct: 564 LVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLG------EAEDVILTMPFKPSA 617
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+M AL++ G + +Q +++P + + ++ Y G + ++ LM
Sbjct: 618 AMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLM 677
Query: 243 QQEKVKPNSA-----------SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
++ VK SFVA + + L+ T G P
Sbjct: 678 KERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVM 737
Query: 292 CMVDLLGR-------SGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+D G+ S +L A LI PE + V +L CH
Sbjct: 738 HDLDQEGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCH 784
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +C L +GK+ H H++R + + + L+ +Y+ CG + ARR FD+F K
Sbjct: 50 LLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNK- 108
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
WN MISGY G + A +F LMQQE ++P+ +FV++LSAC ++ ++
Sbjct: 109 -SVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREV 167
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+ + GL ++ + + G + +AR + + + +L GA +
Sbjct: 168 HVRVMEA-GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA---YAE 223
Query: 334 SDLGEEMAMKLQEMEPENPTPFVI 357
S +E M E P I
Sbjct: 224 SGYAQESLKTYHAMLQEGVRPSRI 247
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 208/384 (54%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T +S+I +C + +Q G+++H L+ + TALVDMY KCG + A +
Sbjct: 230 PNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAI 289
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K D TW +MIS ++Q
Sbjct: 290 FDSMKNK------------------------------------DVMTWTAMISAYAQANC 313
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
AF+LF +M+ G+ P+ + S+LS CA AL +GK H ++ + + D + TA
Sbjct: 314 IDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA 373
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG S A+R F E D WN M++GYG +G E A+++F M+ VK
Sbjct: 374 LIDMYAKCGDISGAQRLFS--EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVK 431
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ L AC HAG V + +F M DFGL PK EH+GCMVDLLGR+G LDEA +
Sbjct: 432 PNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYK 491
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P ++++ ++L AC H NS++GE A +L +EP+N V++SNIYA R
Sbjct: 492 MIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANR 551
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W DV +R+ + D + K PG+S+
Sbjct: 552 WNDVAGMRKAVKDTGIKKEPGMSS 575
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 20/350 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L E +S SV+ AC+ + + G+++HG ++K SD + AL+ MY +CG L
Sbjct: 103 LDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVS 162
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F ++ R++++W+TMI + LF G + +W +MI+G+
Sbjct: 163 ARLLFDKM-SERDVVSWSTMIRAYI---------TLFYGFSQRSI----VSWTAMIAGYI 208
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ E +LF +M + P+ + S++ +C + A++LGK H +++R +
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLA 268
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ATAL+ MY KCG+ AR FD +K D W AMIS Y + + A ++F M+
Sbjct: 269 LATALVDMYGKCGEIRSARAIFDS--MKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRD 326
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V+PN + V++LS C G +D + F D G++ ++D+ + G +
Sbjct: 327 NGVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
A+ L E + + ++ ++ H GE+ EME P
Sbjct: 386 GAQRLFSEAIDRDICTWNVMMAGYGMH---GYGEKALKLFTEMETLGVKP 432
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 214/386 (55%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+++V+SACA ++ GRQVH S+ I AL+D+Y KCG
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCG-------- 245
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A LF+GL+++ D +WN++I G++ + +
Sbjct: 246 ------------------------EVETACGLFQGLSYK----DVISWNTLIGGYTHMNL 277
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESMA 186
EA LF++M +G P+ + SVL ACA L A+ +G+ H ++ + + S+
Sbjct: 278 YKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 337
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A + F+ K + WNAMI G+ +G +++ ++F M++
Sbjct: 338 TSLIDMYAKCGDIEAAHQVFNSMLHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIG 395
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +FV +LSAC H+G +D IF M D+ + PK EH+GCM+DLLG SG EA
Sbjct: 396 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 455
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+I + EP ++ SLL AC H N +L E A L ++EPENP+ +++LSNIYA
Sbjct: 456 EEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASA 515
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRWEDV RIR ++N + + K+PG S+
Sbjct: 516 GRWEDVARIRALLNGKCMKKVPGCSS 541
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 189/382 (49%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA G+Q+HG LK+ D + T+L+ MY++ L A+ V
Sbjct: 62 PNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKV 121
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ +I G G A +LF+ + D +WN+MISG+++ G
Sbjct: 122 FDR-SSHRDVVSYTALITGYASRGDIRSAQKLFDEIP----VKDVVSWNAMISGYAETGC 176
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LFE+M + P +VLSACA +++LG++ H V + + + A
Sbjct: 177 YKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNA 236
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F K D WN +I GY Y+ A+ +F M +
Sbjct: 237 LIDLYSKCGEVETACGLFQGLSYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 294
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + ++VL AC H G +D I +D G+ ++D+ + G ++ A
Sbjct: 295 PNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAH 354
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H +D ++ ++++ +EP++ T +LS ++G
Sbjct: 355 QVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSG 414
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 415 M---LDLGRHIFRSMTQDYKMT 433
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 16/334 (4%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N L WNTMI G L+ ++ L+ + G P+ T+ ++
Sbjct: 14 LPYATSVFETIQ-EPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLK 72
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
++ E ++ ++ G L TS++S L E V ++
Sbjct: 73 SCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRL----EDAYKVFDRSSHR 128
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D TALI+ Y G A++ FD+ +K D WNAMISGY G Y+ A+E+F+
Sbjct: 129 DVVSYTALITGYASRGDIRSAQKLFDEIPVK--DVVSWNAMISGYAETGCYKEALELFEE 186
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M + V+P+ +++V VLSAC H+G ++ Q+ + +DD G + ++DL + G
Sbjct: 187 MMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDH-GFDSNLKIVNALIDLYSKCG 245
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILS 359
++ A L + L V +++L+G + H+N L +E + QEM E P +LS
Sbjct: 246 EVETACGLFQGLSYKDVISWNTLIGG-YTHMN--LYKEALLLFQEMLRSGETPNDVTMLS 302
Query: 360 NI--YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+ A LG D+GR + D++L + S+
Sbjct: 303 VLPACAHLGAI-DIGRWIHVYIDKRLKGVTNASS 335
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 14/249 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +SV+ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 293 ETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 352
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ +WN MI G ++GR++ + +LF + G +PD T+ ++S S
Sbjct: 353 AHQVFNSML-HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACS 411
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M Q M P L+ C+ +L L KE + ++
Sbjct: 412 HSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG------LFKEAEEMINTMEME 465
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G A F +I+P++P+ + + + Y G +E I
Sbjct: 466 PDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRWEDVARIR 525
Query: 240 DLMQQEKVK 248
L+ + +K
Sbjct: 526 ALLNGKCMK 534
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 213/384 (55%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ + +V+SAC L +G+ +H ++ D + +ALV MY CG + A N
Sbjct: 220 EPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALN 279
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+++ +N++ M+ G G+ E A +F + K D W++MISG+++
Sbjct: 280 LFEKMT-PKNLVASTAMVTGYSKLGQIENARSVFNQMV----KKDLVCWSAMISGYAESD 334
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQS G+ P + SV++ACA L AL K H V + +
Sbjct: 335 SPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINN 394
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ARR FD+ K + W MIS + +G+ SA+ F M+ E +
Sbjct: 395 ALIEMYAKCGSLERARRIFDKMPRK--NVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV VL AC HAG V++ +IF M ++ + PK H+GCMVDL GR+ L EA
Sbjct: 453 EPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREAL 512
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL+ +P P V ++ SL+ AC H +LGE A +L E++P++ V LSNIYA
Sbjct: 513 ELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKAR 572
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDVG++R+++ + ++K G S
Sbjct: 573 RWEDVGQVRKLMKHKGISKERGCS 596
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 184/381 (48%), Gaps = 24/381 (6%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+F ++ A + + L G ++HGL K+ SD + T LV MY CG + A +F ++
Sbjct: 124 SFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKM 183
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+++TW+ MI G +G A+ LFE + + +PD ++++S + G
Sbjct: 184 -FHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG 242
Query: 133 FKLFEKMQSTGMV--PSLK-CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDESMATA 188
+ + + +V P L+ + ++ ++C + AL L ++ K+ +TA
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKM--------TPKNLVASTA 294
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+++ Y K GQ AR F+Q K D W+AMISGY + + A+ +F+ MQ +K
Sbjct: 295 MVTGYSKLGQIENARSVFNQMVKK--DLVCWSAMISGYAESDSPQEALNLFNEMQSLGIK 352
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + ++V++AC H G +D+A I +D + G ++++ + G L+ AR
Sbjct: 353 PDQVTMLSVITACAHLGALDQAKWIHLFVDKN-GFGGALPINNALIEMYAKCGSLERARR 411
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA--G 364
+ ++P V + ++ A H D G + +ME EN P + +YA
Sbjct: 412 IFDKMPRKNVISWTCMISAFAMH--GDAGSALRF-FHQMEDENIEPNGITFVGVLYACSH 468
Query: 365 LGRWEDVGRI-RQMINDRQLT 384
G E+ +I MIN+ +T
Sbjct: 469 AGLVEEGRKIFYSMINEHNIT 489
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP+ N + S+ + ++E+M++ G+ +L A + + +L G E
Sbjct: 84 KPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLE 143
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG + + D + T L+ MY CG+ + AR FD+ + D W+ MI GY ++
Sbjct: 144 IHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHR--DVVTWSIMIDGYCQS 201
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQE 288
G + A+ +F+ M+ V+P+ VLSACG AG++ I +M+++ + P +
Sbjct: 202 GLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQ 261
Query: 289 HFGCMVDLLGRSGRLDEARELIREL 313
+V + G +D A L ++
Sbjct: 262 --SALVTMYASCGSMDLALNLFEKM 284
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L +P+ VT +SVI+ACA L L + +H K I AL++MY KCG L
Sbjct: 347 QSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSL 406
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F ++ +N+++W MI+ ++G + A+ F + E +P+ T+ ++
Sbjct: 407 ERARRIFDKMP-RKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYA 465
Query: 123 FSQLGMRFEAFKLFEKM 139
S G+ E K+F M
Sbjct: 466 CSHAGLVEEGRKIFYSM 482
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 216/384 (56%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F + ACASL + G+ +H K SD TAL+DMY K G L A +
Sbjct: 80 PNQYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQL 139
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+I TWN++IAG +G E A+ELF + +W ++ISG++Q G
Sbjct: 140 FDEMP-VRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNV----ISWTALISGYAQNGK 194
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F +++ G P+ + SVL AC+ L AL +GK + K+ ++
Sbjct: 195 YAKALEMFIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSN 254
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ ++ +CG A++ FD+ K + WN MI G +G A++++D M K+
Sbjct: 255 AVLELHARCGNIEEAQQVFDEIGSK-RNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKM 313
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV +L AC H G V + Q+F M+ F + PK EH+GC+VDLLGR+G L EA
Sbjct: 314 RPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAY 373
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P P ++ +LLGAC H N +LGE A L ++EP NP +VILSNIYA G
Sbjct: 374 NLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAG 433
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W V R+R+M+ +TK G S
Sbjct: 434 DWSGVARLRKMMKGGHITKRAGYS 457
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP +N I FS +G + L+ +M S G P+ T + ACA L + G+
Sbjct: 44 KPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFNVYPGQM 103
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H H ++ D TAL+ MY K G AR+ FD+ ++ D P WN++I+GY R+
Sbjct: 104 LHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVR-DIPT-WNSLIAGYARS 161
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E+A+E+F+ M V S+ A++S G KAL++F ++++ G KP +
Sbjct: 162 GHMEAALELFNKMPVRNV----ISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEVS 217
Query: 290 FGCMVDLLGRSGRLDEAREL 309
++ + G LD + +
Sbjct: 218 IASVLPACSQLGALDIGKRI 237
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN V+ SV+ AC+ L L G+++ + + A+++++ +CG + A
Sbjct: 212 KPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQ 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ RN+ +WNTMI G+ ++GR A++L++ + +PD T+ ++ + G
Sbjct: 272 VFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGG 331
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADL 161
M E +LFE M+S V P L+ C+ +L +L
Sbjct: 332 MVAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGEL 369
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 212/382 (55%), Gaps = 13/382 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ ++ AC L+ G+QVH ++ S ++ +L++MY + G L AH VF E+
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRF 130
+ R++++WN +I+ G+ KA LF + PD TW +M+SG++ +G
Sbjct: 181 R-ERDVVSWNMLISAHARLGQMRKATALFNSM------PDKTIVTWTAMVSGYTTVGDYP 233
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A F MQ+ G P + +VL ACA L L+LG+ + + R + + AL+
Sbjct: 234 GAVDAFRSMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALM 293
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKP 249
MY KCG A + FD K D W+ +I G +G AV +F M++E KV+P
Sbjct: 294 EMYAKCGCIDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRP 351
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV +LSAC +AG VD+ L F M+D +G++P EH+GC+VDLLGRSG++ A +L
Sbjct: 352 NVITFVGLLSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDL 411
Query: 310 IRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P P V+ SLL AC H + D A +L E+EP++ V+L+N+YA RW
Sbjct: 412 VRDMPVPADAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRW 471
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV R+ I R + K PG S
Sbjct: 472 SDVASTRKAIRSRSMRKTPGCS 493
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 87/153 (56%), Gaps = 6/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ ++V+ ACA L L+ GR ++ + + T I AL++MY KCGC+ A
Sbjct: 248 EPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQALQ 307
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
+F + +++++W+T+I G+ +GR+ +A+ LF + EG +P+ T+ ++S S
Sbjct: 308 LFDGM-ADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGLLSACSYA 366
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
G+ E F++M G+ P ++ CV +L
Sbjct: 367 GLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLL 399
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 13/184 (7%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V + L AC L HGHV+R +++ +AT ++ + + + A R F Q
Sbjct: 17 VMARLRACVTFRDLL---RVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQ-- 71
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-------NSASFVAVLSACGH 263
++ + NAMI Y +N ++ AV ++ M + P + ++ +L ACG
Sbjct: 72 VRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFTYPFLLKACGG 131
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
++ Q+ T + G ++++ R+G L A ++ E+ E V ++
Sbjct: 132 TAALELGKQVHTHVVRS-GCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDVVSWNM 190
Query: 324 LLGA 327
L+ A
Sbjct: 191 LISA 194
>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
Length = 649
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 202/375 (53%), Gaps = 30/375 (8%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D IG LVDMY K G L A VF ++ R+++ WN MIAG+ + A +F+
Sbjct: 147 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAGLSQSEDPYVARRVFD 205
Query: 103 ---------------GLAHEG-----------FKPDPATWNSMISGFSQLGMRFEAFKLF 136
G AH G K TWN +I+ + Q G EA F
Sbjct: 206 QMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSF 265
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M+ P+ SVL A A L+A + G H +I+ + + +LI MY KC
Sbjct: 266 HQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKC 325
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
GQ ++ + F++ + K D WNAM+SGY +G + A+ +F LMQ+ +V+ +S SFV+
Sbjct: 326 GQLDYSEKLFNEMDHK--DTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVS 383
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
VLSAC HAG V++ +IF M D + +KP EH+ CMVDLLGR+G DE I+ +P E
Sbjct: 384 VLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVE 443
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
P V+ +LLG+C H N LGE L ++EP NP FV+LS+IYA GRW D G+ R
Sbjct: 444 PDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKAR 503
Query: 376 QMINDRQLTKLPGIS 390
+ND L K PG S
Sbjct: 504 SKMNDLGLKKTPGCS 518
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVTF+SV+ A A L + G H +++ S+T++G +L+DMY KCG L +
Sbjct: 274 HPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEK 333
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ ++ ++WN M++G ++G ++A+ LF + + D ++ S++S G
Sbjct: 334 LFNEMD-HKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAG 392
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E K+F M + P L+ C+ +L L ET G + + D
Sbjct: 393 LVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG------LFDETLGFIKVMPVEPDA 446
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESA 235
+ AL+ D +++P +PA + + S Y ++G + A
Sbjct: 447 GVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADA 499
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 143/338 (42%), Gaps = 15/338 (4%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-G 108
T L+++Y A +VF IL WN+MI + + +A+E++ + + G
Sbjct: 87 THLINLYSLFHKCDLARSVFDSTPNPSRIL-WNSMIRAYTRSKQYNEALEMYYCMVEKGG 145
Query: 109 FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+ D ++ +S++G A ++F+KM +V + + + LS D +
Sbjct: 146 LERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVV-AWNAMIAGLSQSEDPYVAR--- 201
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
V +++D+ +++ Y G FD+ ++ WN +I+ Y +
Sbjct: 202 ----RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKL---GNVTWNVIIAAYMQ 254
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG + A+ F M+ E PNS +FV+VL A + + + F G
Sbjct: 255 NGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTL 313
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
++D+ + G+LD + +L E+ ++++L H + D + +QE +
Sbjct: 314 VGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQ 373
Query: 349 PE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
+ + FV + + G E+ +I ++D+ K
Sbjct: 374 VQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIK 411
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 220/385 (57%), Gaps = 11/385 (2%)
Query: 9 PNSVTFISVISACAS-LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P VT++SV+SAC + G QVHG + D + ALVDMY +C + A
Sbjct: 120 PTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMGSAWK 179
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ R++++W ++++G+ G+ ++A +LF+ + D +W +MI G+
Sbjct: 180 VFDGMQ-VRSVVSWTSLLSGLARLGQVDEARDLFDRMPER----DTVSWTAMIDGYVWAA 234
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F +MQ + + + SV++ACA L AL++G+ ++ R + D +
Sbjct: 235 RFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN 294
Query: 188 ALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG R D F+ + D W A+I G NG E A+E+F M +
Sbjct: 295 ALIDMYSKCGS---IERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVS 351
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ +F+ VL+AC HAG VDK + F M + + + P H+GC++DLLGR+G++ EA
Sbjct: 352 ETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEA 411
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I ++P P +++ +LL AC H NS++GE +A +L E++PEN +++LSNIYA
Sbjct: 412 LDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKC 471
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R I ++ + K PG S
Sbjct: 472 NRWEDVRRLRHAIMEKGIKKEPGCS 496
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 31/229 (13%)
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA-LKLGKETH 171
P WN++ISG ++ G E+ F M G P+ SVLSAC + + LG + H
Sbjct: 87 PVAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVH 146
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK------------------- 212
G V+ + + D + AL+ MY +C A + FD +++
Sbjct: 147 GRVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVD 206
Query: 213 ---------PD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
P+ D W AMI GY + A+E+F MQ V + + V+V++AC
Sbjct: 207 EARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACA 266
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
G ++ + M G+K ++D+ + G ++ A ++ +
Sbjct: 267 QLGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFK 314
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 120/295 (40%), Gaps = 55/295 (18%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLS----ALKLGKETHGHVIRADLNKDESMA 186
+A + +M + G P ++L A A + + + H HV+R + ++ +A
Sbjct: 2 DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++L++ Y G + AR + D P WNA+ISG+ R G + + F M +
Sbjct: 62 SSLVAAYTAGGDGAAARALVGEC----DTPVAWNALISGHNRGGRFGESCGSFVDMARAG 117
Query: 247 VKPNSASFVAVLSACGHAGH-VDKALQIFTMMDDDFGLKPKQEHFGCMVDL--------- 296
P ++V+VLSACG V +Q+ + G+ P +VD+
Sbjct: 118 AAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMGS 176
Query: 297 ----------------------LGRSGRLDEARELIRELPE-PTVSVYHSLLGACWCHLN 333
L R G++DEAR+L +PE TVS + G W
Sbjct: 177 AWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWA--- 233
Query: 334 SDLGEEMAMKLQEMEPENPTP--FVILSNIYA-------GLGRWEDVGRIRQMIN 379
+ E + M +EM+ N + F ++S I A +G W V RQ I
Sbjct: 234 ARFREALEM-FREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 287
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA-LVDMYLKCGCLP 63
+S+ P+ VTFI V++AC + GR+ ++ + ++ ++D+ + G +
Sbjct: 350 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKIT 409
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A + ++ + N W T++A ++G S E+ E +A + DP NSM+
Sbjct: 410 EALDTIDQMPMTPNSTIWGTLLAACRVHGNS----EIGELVAERLLELDPE--NSMV 460
>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 210/342 (61%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+A++ Y++ G L A +++ + G ++++ M+ G M G+ E A +F+ +A +
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNV-GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNL 260
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
TWNSMI+G+ + + K+F+ M + + P+ ++SVL C++LSAL LG++
Sbjct: 261 ----VTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQ 316
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V ++ L+KD + T+LISMY KCG A + F E+ D WNAMISGY ++
Sbjct: 317 MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF--LEMPRKDVISWNAMISGYAQH 374
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G A+ +FD M+ +KP+ +FVAV+ AC HAG VD +Q F M +FG++ K H
Sbjct: 375 GAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ C++DLLGR+GRLDEA LI+E+P +P ++Y +LLGAC H N DL E A L ++
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLD 494
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P + T +V L+NIYA +W+ V ++R+M+ + + K+PG S
Sbjct: 495 PTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 40/323 (12%)
Query: 37 TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM-LNGRSE 95
L ++ SD + + +++ L A NVF+++ R +TWNTM++G + G+ +
Sbjct: 64 NLHVDTASDVVSLNKTIASFVRACDLESARNVFEKM-SVRTTVTWNTMLSGYTKVAGKVK 122
Query: 96 KAMELFE-------------------------GLAHEGFKP--DPATWNSMISGFSQLGM 128
+A ELF+ LA P D A+WN++ISGF+Q G
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+AF LF M V ++++S + L+ +E + +V K + TA
Sbjct: 183 MQKAFDLFSVMPEKNGV----SWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETA 234
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+++ YMK G+ A R F + +K + WN+MI+GY N E +++F M + +V+
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVK--NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR 292
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN S +VL C + + Q+ ++ L ++ + + G LD A +
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS-PLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 309 LIRELPEPTVSVYHSLLGACWCH 331
L E+P V +++++ H
Sbjct: 352 LFLEMPRKDVISWNAMISGYAQH 374
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN ++ SV+ C++L L GRQ+H L K DT T+L+ MY KCG L A
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI-----SG 122
+F E+ +++++WN MI+G +G KA+ LF+ + + KPD T+ ++I +G
Sbjct: 352 LFLEMP-RKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLS-ALKLGKE 169
F LG+++ FK +K P CV +L L A+ L KE
Sbjct: 411 FVDLGVQY--FKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKE 457
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 217/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F S++SA AS+ LQ G +HG KI + D + ++L+DMY KCG
Sbjct: 313 KPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRF 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +N+++WN M+ G LNG E+A LF + + +W+++I+G
Sbjct: 373 LFDTIL-EKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVR----NNVSWSAIIAGHLDCE 427
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F++F +M G +P+ +S+L ACA ++L GK HG +++ + D + T
Sbjct: 428 QFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGT 487
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
AL MY K G +++ F++ K + W AMI G +G E ++ +F+ M++
Sbjct: 488 ALTDMYAKSGDIESSKKVFNRMPKK--NEVSWTAMIQGLAESGLAEESLTLFEEMEKTSS 545
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ PN F+AVL AC H+G VDK L F M+ +GLKPK HF C+VD+L R+GRL EA
Sbjct: 546 IAPNEVMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEA 605
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E I +P +P + + +LL C + N +L E +A KL EM +N +V+LSNIYA
Sbjct: 606 EEFIYSMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASA 665
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV ++R+++ + L K G S
Sbjct: 666 GRWRDVLKVRKLMKAKGLKKSGGCS 690
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 181/390 (46%), Gaps = 45/390 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VTF SV+ ACA+L G V GL +K + D + +L+ + L+ G + A
Sbjct: 181 KPNKVTFTSVVRACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLARE 240
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +++++W ++ + +A +F+ + + +W++MI+ + Q G
Sbjct: 241 VFDRME-EKDVVSWTAILDLYVEMDELGEARRIFDEMPQR----NEVSWSAMIARYCQSG 295
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +LF +M G P++ C +S+LSA A + AL+ G HGHV + KD +++
Sbjct: 296 YPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSS 355
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ-QEK 246
+LI MY KCG+ R FD I + WNAM+ GY NG E A +F++M +
Sbjct: 356 SLIDMYCKCGETKDGRFLFDT--ILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNN 413
Query: 247 VK------------------------------PNSASFVAVLSACGHAGHVDKALQIFTM 276
V PN ++F ++L AC +DK +
Sbjct: 414 VSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGK 473
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
+ G++ + D+ +SG ++ ++++ +P+ + +++ S L
Sbjct: 474 I-VKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGL---AESGL 529
Query: 337 GEEMAMKLQEMEPEN---PTPFVILSNIYA 363
EE +EME + P + L+ ++A
Sbjct: 530 AEESLTLFEEMEKTSSIAPNEVMFLAVLFA 559
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 127/254 (50%), Gaps = 12/254 (4%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D ++ ++ ++ G L A +F E+ + N ++W +I+G M GR ++M FE
Sbjct: 86 DLVVHNCMISANVQRGNLDEARKLFDEMPQT-NEISWTALISGFMKYGRVRESMWYFERN 144
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ + +W + ISG+ Q G EA KLF K+ + + P+ TSV+ ACA+L
Sbjct: 145 PFQ----NVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDF 200
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG G +++ D +++ +LI++ ++ G+ AR FD+ E K D W A++
Sbjct: 201 GLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEK--DVVSWTAILD 258
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
Y E A IFD M Q N S+ A+++ +G+ +++L++F M + G K
Sbjct: 259 LYVEMDELGEARRIFDEMPQR----NEVSWSAMIARYCQSGYPEESLRLFCRMIQE-GFK 313
Query: 285 PKQEHFGCMVDLLG 298
P F ++ L
Sbjct: 314 PNISCFSSILSALA 327
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L + PN TF S++ ACAS L G+ +HG +K+ Q DT +GTAL DMY K G +
Sbjct: 442 LGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIES 501
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH-EGFKPDPATWNSMISGF 123
+ VF + +N ++W MI G+ +G +E+++ LFE + P+ + +++
Sbjct: 502 SKKVFNRMP-KKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFAC 560
Query: 124 SQLGMRFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADL 161
S G+ + F M++ G+ P CV +LS L
Sbjct: 561 SHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRL 602
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 91/240 (37%), Gaps = 70/240 (29%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM--------------- 194
CV S+L + ++ G H H+ + ++ ++ ++ L+ MY+
Sbjct: 24 CV-SLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDF 82
Query: 195 ----------------KCGQPSWARRFFDQ----------------------------FE 210
+ G AR+ FD+ FE
Sbjct: 83 DGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMWYFE 142
Query: 211 IKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
P + W A ISGY +NG A+++F + + +VKPN +F +V+ AC + G
Sbjct: 143 RNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGL 202
Query: 270 ALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + ++ +K EH ++ L R G + ARE+ + E V + ++L
Sbjct: 203 GMSVLGLI-----VKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAIL 257
>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 218/397 (54%), Gaps = 14/397 (3%)
Query: 1 MKECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL 57
M C+ E P S TF +++ AC ++ L GRQ H T ++ +G ++DMY+
Sbjct: 136 MYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYV 195
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
KC + CA VF E+ R++++W +IA G E A ELFE L + D W
Sbjct: 196 KCESIDCARKVFDEMP-ERDVISWTELIAAYARVGNMECAAELFESLPTK----DMVAWT 250
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+M++GF+Q EA + F++M+ +G+ V +SACA L A K ++
Sbjct: 251 AMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS 310
Query: 178 DLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + +ALI MY KCG A F + + +++MI G +G + A
Sbjct: 311 GYSPSDHVVIGSALIDMYSKCGNVEEAVNVF--MSMNNKNVFTYSSMILGLATHGRAQEA 368
Query: 236 VEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+ +F M Q ++KPN+ +FV L AC H+G VD+ Q+F M FG++P ++H+ CMV
Sbjct: 369 LHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMV 428
Query: 295 DLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
DLLGR+GRL EA ELI+ + EP V+ +LLGAC H N ++ E A L E+EP+
Sbjct: 429 DLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIG 488
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+++LSN+YA G W V R+R++I ++ L K P +S
Sbjct: 489 NYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVS 525
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 27/190 (14%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP--SWARRFFDQ 208
V+S++S D L K+ HGHV+R L++ + T LI K G P +ARR +
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEP 108
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ + +P W A+I GY G+++ A+ ++ M++E++ P S +F A+L ACG
Sbjct: 109 VQFR--NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACG------ 160
Query: 269 KALQIFTMMDDDFGLKPKQEHF-----------GCMVDLLGRSGRLDEARELIRELPEPT 317
TM D + G + + F M+D+ + +D AR++ E+PE
Sbjct: 161 ------TMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERD 214
Query: 318 VSVYHSLLGA 327
V + L+ A
Sbjct: 215 VISWTELIAA 224
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 40/255 (15%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+P W ++I G++ G EA ++ M+ + P +++L AC + L LG++ H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ----------------------- 208
R + +I MY+KC AR+ FD+
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 209 -----FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
FE P D W AM++G+ +N + + A+E FD M++ ++ + + +SAC
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 263 HAG---HVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEP 316
G + D+A+QI G P +H ++D+ + G ++EA + +
Sbjct: 293 QLGASKYADRAVQI----AQKSGYSP-SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 317 TVSVYHSLLGACWCH 331
V Y S++ H
Sbjct: 348 NVFTYSSMILGLATH 362
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 220/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++TF ++ +C L + G Q HG +K + D + +LV MY G A +
Sbjct: 117 PDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLI 176
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ + ++++W +MI G G E A +LF+ + + TW++MISG++Q
Sbjct: 177 FQRMYYV-DVVSWTSMIRGFNKCGDVESARKLFDQMPEKNL----VTWSTMISGYAQNNH 231
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +LF+ +QS G+ + + SV+S+CA L AL+LG+ H +V++ + + + TA
Sbjct: 232 FDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTA 291
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY +CG A F+ ++ D W A+I+G +G E +++ F M + +
Sbjct: 292 LVDMYARCGSIDKAVWVFE--DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLT 349
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P +F AVLSAC H G V++ QIF M D ++P+ EH+GCMVDLLGR+G+L+EA
Sbjct: 350 PRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAER 409
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ ++P +P V+ +LLGAC H N+++GE + L ++ P++ +V+LSNIYA
Sbjct: 410 FVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKE 469
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +RQM+ + L K PG S
Sbjct: 470 WEKVTEMRQMMKAKGLKKPPGHS 492
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 150/380 (39%), Gaps = 81/380 (21%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTAL----VDMYLKCGCLPCAHNVFQELK 73
+ C+ L +L+ +H ++ D + L VD + A +F +++
Sbjct: 24 LETCSDLTHLKI---IHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQ 80
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK-PDPATWNSMISGFSQLGMRFEA 132
N+ +N MI G H G K PD +A
Sbjct: 81 NP-NLFIFNAMIRG------------------HSGSKNPD------------------QA 103
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
F + + Q G++P ++ +C L + +G + HGH+I+ KD + +L+ M
Sbjct: 104 FHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHM 163
Query: 193 YM-------------------------------KCGQPSWARRFFDQFEIKPDDPAFWNA 221
Y KCG AR+ FDQ K + W+
Sbjct: 164 YATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEK--NLVTWST 221
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MISGY +N ++ AVE+F ++Q + V+ N V+V+S+C H G ++ + + +
Sbjct: 222 MISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKN- 280
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
G+ +VD+ R G +D+A + +LPE + +L+ H S+ +
Sbjct: 281 GMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYF 340
Query: 342 MKLQE--MEPENPTPFVILS 359
+ E + P + T +LS
Sbjct: 341 ATMVEAGLTPRDITFTAVLS 360
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 209/386 (54%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ AC L L+ GR V G ++ + ++ IG+AL+ MY KCG
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCG------- 268
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
EL SR I F+G+ F TWN+ IS ++Q G
Sbjct: 269 ---ELVSSRRI----------------------FDGMPSRDF----ITWNAAISAYAQNG 299
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF M+ G+ P+ +T+VLSACA + AL LGK+ + L D +AT
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-- 245
ALI MY KCG A+R F+ K D A WNAMIS +G+ + A+ +F+ M E
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKND--ASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +FV++LSAC HAG VD+ ++F MM FGL PK EH+ CMVDLL R+G L E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I ++PE P +L AC N D+GE + L E++P N ++I S IY
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L W+D R+R ++ + +TK PG S
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCS 563
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 176/373 (47%), Gaps = 53/373 (14%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L+ PN+ TF V ACA+L ++ R H K+ +D ++V MY +CG
Sbjct: 109 KTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGEN 168
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ +EK D +WNS++SG
Sbjct: 169 GVARKVFDEI---------------------TEK---------------DLVSWNSLLSG 192
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+++LG EA ++F ++ + +G P + SVL AC +L L+LG+ G V+ +
Sbjct: 193 YAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKV 252
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + +ALISMY KCG+ +RR FD + D WNA IS Y +NG + A+ +F
Sbjct: 253 NSYIGSALISMYSKCGELVSSRRIFDGMPSR--DFITWNAAISAYAQNGMADEAISLFHS 310
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLL 297
M++ V PN + AVLSAC G +D Q+ D++ +H ++D+
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQM-----DEYATHRGLQHDIFVATALIDMY 365
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPT 353
+ G L+ A+ + ++P + +++++ A H + L E M+ + P + T
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDIT 425
Query: 354 PFVILSN-IYAGL 365
+LS ++AGL
Sbjct: 426 FVSLLSACVHAGL 438
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 17/265 (6%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+H P+ +N M+ + + L+ +M++ + P+ V ACA+L
Sbjct: 72 FSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLE 131
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+++ + H V + L+ D ++++MY +CG+ AR+ FD EI D WN++
Sbjct: 132 EIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFD--EITEKDLVSWNSL 189
Query: 223 ISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDD 279
+SGY + G AVE+F +++E +P+ S V+VL ACG G ++ + ++ F +
Sbjct: 190 LSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVV--- 246
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+ G+K ++ + + G L +R + +P +++ + A + + + +E
Sbjct: 247 ERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA---YAQNGMADE 303
Query: 340 M-----AMKLQEMEPENPTPFVILS 359
+MK ++P T +LS
Sbjct: 304 AISLFHSMKENGVDPNKVTLTAVLS 328
>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 547
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 222/419 (52%), Gaps = 39/419 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN SV+ AC + LQ G+ +H + L+ +SD ++ TAL+DMY +C + A
Sbjct: 127 RPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARK 186
Query: 68 VF----------------------------------QELKGSRNILTWNTMIAGMMLNGR 93
VF Q L N++TWNT+I+G G
Sbjct: 187 VFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGD 246
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
ELF ++ GF+PD +W S+IS F Q AF F++M G P+ ++S
Sbjct: 247 KVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISS 306
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L ACA L+ ++ G+E HG+ + +D + +A++ MY KCG S AR F + +
Sbjct: 307 LLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSK--MPE 364
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHVDKALQ 272
WN+MI GY +G + A+E+F+ M++ E K + SF AVL+AC H V+
Sbjct: 365 RHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQS 424
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F +M + + + P+ EH+ CM+DLLGR+G+L EA ++I+ +P EP + V+ +LLGAC H
Sbjct: 425 LFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQH 484
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
DL E A L E+EP N ++LSN+YA G WE+V +++ M ++L K S
Sbjct: 485 GEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLK-MGKRKRLRKFSAYS 542
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP+ +I +S+ G + +F +MQ+ + P+ + SVL AC + L+ GK
Sbjct: 92 KPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGKI 151
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++R D + TALI MY +C AR+ FD + K D NAM+ GY +N
Sbjct: 152 LHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEK--DLVALNAMVLGYAQN 209
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G + + + MQ +KPN ++ ++S AG ++F +M G +P
Sbjct: 210 GFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMH-GFEPDVIS 268
Query: 290 FGCMVDLLGRSGRLDEA----RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+ ++ ++ + A +++++ P + SLL AC N G E+
Sbjct: 269 WTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGREL 323
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 21/204 (10%)
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
+I G + G F+ ++ QS+ SL ++ AL GK H +I +
Sbjct: 4 VIRGITFHGPHFKIPIIYRSFQSS----SLHTFDELIKTYTRDHALNQGKHLHARLIVSG 59
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAV 236
L + A+ LIS Y + Q S R+ FD+ P F+ +I Y R+G Y+ +
Sbjct: 60 LASSNNFASKLISFYTETRQLSIVRKLFDRIP----KPNFYQRTVLIGAYSRHGFYQDVL 115
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHA-----GHVDKALQIFTMMDDDFGLKPKQEHFG 291
++F MQ E+++PN +VL ACGH G + ++ + + + D +
Sbjct: 116 DVFSEMQNERLRPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNT------ 169
Query: 292 CMVDLLGRSGRLDEARELIRELPE 315
++D+ R +++AR++ + E
Sbjct: 170 ALIDMYSRCRHVEKARKVFDGMQE 193
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/377 (36%), Positives = 212/377 (56%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C + + + G Q+H L LK ++ +L+ MY KCG L A +F
Sbjct: 397 TLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNAELIFN-FMAE 455
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R+I++W MI G KA E F+ ++ + TWN+M+ + Q G + K+
Sbjct: 456 RDIVSWTGMITAYSQVGNIAKAREFFDDMSTR----NVITWNAMLGAYIQHGAEEDGLKM 511
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M + ++P ++ CAD+ A KLG + GH ++ L D S+ A+I+MY
Sbjct: 512 YSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYS 571
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ S AR+ FD K D WNAMI+GY ++G + A+EIFD + + KP+ S+
Sbjct: 572 KCGRISEARKAFDFLSRK--DLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISY 629
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V++ F MM D + P EHF CMVDLLGR+G L EA+ LI E+P
Sbjct: 630 VAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNLIDEMP 689
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N+DL E A L +++ +++L+ +YA G+ +D +
Sbjct: 690 MKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKSDDSAQ 749
Query: 374 IRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 750 VRKLMRDKGIKKSPGYS 766
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 171/370 (46%), Gaps = 37/370 (10%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ PN+ TF V+ +C +L + + Q+ GL K + Q D + TALVDM ++CG
Sbjct: 149 MRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCG 208
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A F +K I+ N+M+ G + + A+E+F+ + D +WN +I
Sbjct: 209 AMDFASKQFSRIKNP-TIICRNSMLVGYAKSHGVDHALEIFKSMPER----DVVSWNMVI 263
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
S S+ G EA + M G+ P TS L+ACA LS+L+ GK+ H VIR +
Sbjct: 264 SALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPH 323
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D +A+A++ +Y KCG A+R F ++ + W +I G+ + G + +VE+F+
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFS--SLRDRNSVSWTVLIGGFLQYGCFSESVELFN 381
Query: 241 LMQQEKVKPNSASFVAVLSAC-------------------GHAGHVDKALQIFTMMDDDF 281
M+ E + + + ++S C GH V + + +M
Sbjct: 382 QMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCG 441
Query: 282 GLKPKQEHFGC-----------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
L+ + F M+ + G + +ARE ++ V ++++LGA
Sbjct: 442 NLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQ 501
Query: 331 HLNSDLGEEM 340
H + G +M
Sbjct: 502 HGAEEDGLKM 511
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 147/350 (42%), Gaps = 71/350 (20%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T+ S ++ACA L L++G+Q+H ++ D + +A+V++Y KCGC A
Sbjct: 288 RPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKR 347
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L+ RN ++W +I GF Q G
Sbjct: 348 VFSSLR-DRNSVSWTVLIG-----------------------------------GFLQYG 371
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ +LF +M++ M + +++S C + + LG + H +++ + ++
Sbjct: 372 CFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSN 431
Query: 188 ALISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDP 216
+LISMY KCG SW AR FFD + +
Sbjct: 432 SLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR--NV 489
Query: 217 AFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WNAM+ Y ++G E ++++ D++ ++ V P+ ++V + C G QI
Sbjct: 490 ITWNAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIG 549
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL ++ + + GR+ EAR+ L + +++++
Sbjct: 550 HT-VKVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMI 598
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 23/323 (7%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ +C + L R +H + + S + L+ YL CG L A N+ ++ N
Sbjct: 32 LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEITEPN 91
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQLGMRFEAFKL 135
++T N M+ G G A+ELF G P D A+WN+++SG+ Q G A +
Sbjct: 92 VITHNIMMNGYAKLGSLSDAVELF------GRMPTRDVASWNTIMSGYYQSGQFLNALDI 145
Query: 136 FEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F M+ TG +P+ V+ +C L ++ + G + + D D + TAL+ M +
Sbjct: 146 FVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLV 205
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+CG +A + F + IK N+M+ GY ++ + A+EIF M + V S+
Sbjct: 206 RCGAMDFASKQFSR--IKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDV----VSW 259
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL----I 310
V+SA +G V +AL + M G++P + + R L+ ++L I
Sbjct: 260 NMVISALSKSGRVREALDMVVDMHGK-GVRPDSTTYTSSLTACARLSSLEWGKQLHVQVI 318
Query: 311 RELP--EPTV-SVYHSLLGACWC 330
R LP +P V S L C C
Sbjct: 319 RNLPHIDPYVASAMVELYAKCGC 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 127/276 (46%), Gaps = 47/276 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT++++ CA + + G Q+ G T+K+ DT + A++ MY KCG + A
Sbjct: 523 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAVITMYSKCGRISEARKA 582
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L +++++WN MI G +G ++A+E+F+ + ++G KPD ++ +++SG S G+
Sbjct: 583 FDFLS-RKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAKPDYISYVAVLSGCSHSGL 641
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ M+ + P L+ S DL LG+ GH+I
Sbjct: 642 VEEGKFYFDMMKRDHNISPGLEH----FSCMVDL----LGRA--GHLIE----------- 680
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG---YGRNGEYE-SAVEIFDLMQ 243
A+ D+ +KP W A++S +G N E +A +FDL
Sbjct: 681 --------------AKNLIDEMPMKP-TAEVWGALLSACKTHGNNDLAELAAKHLFDLDS 725
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P S ++ + AG D + Q+ +M D
Sbjct: 726 -----PGSGGYMLLAKMYADAGKSDDSAQVRKLMRD 756
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 116/271 (42%), Gaps = 43/271 (15%)
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+T + + + L +C SAL + H +I L + L+ Y+ CG S
Sbjct: 18 ATSHMAITQALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALS 77
Query: 201 WARRFFDQFEIKPD------------------------------DPAFWNAMISGYGRNG 230
AR +P+ D A WN ++SGY ++G
Sbjct: 78 DARNLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSG 137
Query: 231 EYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
++ +A++IF M+Q PN+ +F V+ +CG G + ALQ+ ++ F + +
Sbjct: 138 QFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLL-SKFDSQDDPDV 196
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL-GACWCHLNSDLGEEMAMKLQEME 348
+VD+L R G +D A + + PT+ +S+L G H G + A+++ +
Sbjct: 197 QTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSH-----GVDHALEIFKSM 251
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
PE V + + + L + GR+R+ ++
Sbjct: 252 PERDV--VSWNMVISALSK---SGRVREALD 277
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 224/383 (58%), Gaps = 10/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+VT++SV+SAC L G QVH L+ D + ALVDMY +CG + A +F
Sbjct: 160 TAVTYVSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLF 219
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ R++ +W ++I+G++ +G+ ++A +LF+ + D W +MI G+ Q+G
Sbjct: 220 EGMQ-MRSMASWTSVISGLVRSGQVDRARDLFDHMPER----DTIAWTAMIDGYVQVGRF 274
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A + F MQ + + SV++ACA L AL+ G+ ++ R + D + AL
Sbjct: 275 RDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNAL 334
Query: 190 ISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I MY KCG R D F ++ D W A+I G NG E A+++F M +
Sbjct: 335 IDMYSKCGS---IERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQT 391
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VL+AC HAG VDK + F M + + + P H+GC++D+LGR+G+L EA +
Sbjct: 392 PDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEALD 451
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P +P +++ +LL +C + NS++GE A +L E++P+N T +++LSN+YA R
Sbjct: 452 TIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAKSNR 511
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV RIRQ+I ++ + K PG S
Sbjct: 512 WKDVRRIRQIIMEKGIKKEPGCS 534
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 110/240 (45%), Gaps = 17/240 (7%)
Query: 79 LTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK 138
+ WN +I+G +GR E + F + T+ S++S + ++ ++
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 139 MQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA--TALISMY 193
+ +G++P + + + + C D+ A + E G +R SMA T++IS
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFE--GMQMR-------SMASWTSVISGL 237
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
++ GQ AR FD + D W AMI GY + G + A+E F MQ KV+ + +
Sbjct: 238 VRSGQVDRARDLFDH--MPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFT 295
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V+V++AC G ++ M G+K ++D+ + G ++ A ++ +++
Sbjct: 296 MVSVVTACAQLGALETGEWARIYM-GRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDM 354
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--FEIKPDDPAFWNAMISGYGR 228
H HV++ + + A++LI MY G + AR + P WNA+ISG+ R
Sbjct: 79 HAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHNR 138
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
+G +E + F M + + ++V+VLSACG + +Q+ + + G+ P Q
Sbjct: 139 SGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLES-GVLPDQR 197
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+VD+ G +D A L + +++ + S++ D ++ M
Sbjct: 198 VENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARDL---FDHMP 254
Query: 349 PENPTPFVILSNIYAGLGRWED 370
+ + + + Y +GR+ D
Sbjct: 255 ERDTIAWTAMIDGYVQVGRFRD 276
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/405 (36%), Positives = 227/405 (56%), Gaps = 21/405 (5%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M E S EPN TF SV AC L+ GRQVHGL +K SD + + +V MYL CG
Sbjct: 102 MVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCG 161
Query: 61 CLPCAHNVF--------------QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
+ AH +F ++ + +++ WN MI G + G E A LF+ +
Sbjct: 162 VMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQ 221
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+WN MI+G++Q G EA ++F +MQ + P+ + SVL A + L AL+L
Sbjct: 222 RSV----VSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALEL 277
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
GK H + +R ++ D+ + +ALI MY KCG A + F+ + + W+ +I+G
Sbjct: 278 GKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGL 335
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+G + ++ F+ M++ V P+ +++ +LSAC HAG V++ F M GL+P+
Sbjct: 336 AMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPR 395
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
EH+GCMVDLLGR+G L+E+ ELI +P +P ++ +LLGAC H N ++G+ +A L
Sbjct: 396 IEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLM 455
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E+ P + +V LSNIYA LG WE V ++R M+ + + K PG S
Sbjct: 456 ELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVRKDPGCS 500
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 66/317 (20%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+P+ ++N++I S+ +A +F E ++ + P+ SV AC L+ G+
Sbjct: 73 RPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGR 132
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF---------------------- 206
+ HG ++ L+ DE + + ++ MY+ CG A R F
Sbjct: 133 QVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGD 192
Query: 207 ---------------------DQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQ 244
+ F+ P WN MI+GY ++G ++ AVE+F MQ
Sbjct: 193 VVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQM 252
Query: 245 EKVKPNSASFVAVLSACGHAGHVD--KALQIFTM-----MDDDFGLKPKQEHFGCMVDLL 297
+V PN + V+VL A G ++ K + ++ + +DD G ++D+
Sbjct: 253 AEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--------SALIDMY 304
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPF 355
+ G +++A ++ LP+ V + +++ H L M+ + P + T
Sbjct: 305 AKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYI 364
Query: 356 VILSNI-YAGL---GRW 368
+LS +AGL GRW
Sbjct: 365 GLLSACSHAGLVNEGRW 381
>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Cucumis sativus]
Length = 667
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 209/342 (61%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+A++ Y++ G L A +++ + G ++++ M+ G M G+ E A +F+ +A +
Sbjct: 202 SAMISGYVEHGDLEAAEELYKNV-GMKSVVVETAMLTGYMKFGKVELAERIFQRMAVKNL 260
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
TWNSMI+G+ + + K+F+ M + + P+ ++SVL C++LSAL LG++
Sbjct: 261 ----VTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQ 316
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V ++ L+KD + T+LISMY KCG A + F E+ D WNAMISGY ++
Sbjct: 317 MHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLF--LEMPRKDVITWNAMISGYAQH 374
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G A+ +FD M+ +KP+ +FVAV+ AC HAG VD +Q F M +FG++ K H
Sbjct: 375 GAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVH 434
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ C++DLLGR+GRLDEA LI+E+P P ++Y +LLGAC H N DL E A L ++
Sbjct: 435 YTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLD 494
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P + T +V L+NIYA +W+ V ++R+M+ + + K+PG S
Sbjct: 495 PTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYS 536
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 147/323 (45%), Gaps = 40/323 (12%)
Query: 37 TLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM-LNGRSE 95
L ++ SD + + +++ L A NVF+++ R +TWNTM++G + G+ +
Sbjct: 64 NLHVDTASDVVSLNKTIASFVRACDLESARNVFEKM-SVRTTVTWNTMLSGYTKVAGKVK 122
Query: 96 KAMELFEG----------------LAHEGFKP-----------DPATWNSMISGFSQLGM 128
+A ELF+ L G K D A+WN++ISGF+Q G
Sbjct: 123 EAHELFDKIPEPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQ 182
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+AF LF M V ++++S + L+ +E + +V K + TA
Sbjct: 183 MQKAFDLFSVMPEKNGV----SWSAMISGYVEHGDLEAAEELYKNVGM----KSVVVETA 234
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+++ YMK G+ A R F + +K + WN+MI+GY N E +++F M + +V+
Sbjct: 235 MLTGYMKFGKVELAERIFQRMAVK--NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVR 292
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN S +VL C + + Q+ ++ L ++ + + G LD A +
Sbjct: 293 PNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS-PLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 309 LIRELPEPTVSVYHSLLGACWCH 331
L E+P V +++++ H
Sbjct: 352 LFLEMPRKDVITWNAMISGYAQH 374
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN ++ SV+ C++L L GRQ+H L K DT T+L+ MY KCG L A
Sbjct: 292 RPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWK 351
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI-----SG 122
+F E+ ++++TWN MI+G +G KA+ LF+ + + KPD T+ ++I +G
Sbjct: 352 LFLEMP-RKDVITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAG 410
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLS-ALKLGKE 169
F LG+++ FK +K P CV +L L A+ L KE
Sbjct: 411 FVDLGVQY--FKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKE 457
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 221/413 (53%), Gaps = 37/413 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F ++ A A+ L G Q+H L + S +GT L+ MY +C CL A V
Sbjct: 104 PDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKV 163
Query: 69 FQEL------------------KGS------------RNILTWNTMIAGMMLNGRSEKAM 98
F E+ +G RN+ +WN M+AG G + A
Sbjct: 164 FDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAR 223
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
E+F + + D +W++MI GF+ G +AF F +++ GM P+ +T VLSAC
Sbjct: 224 EVFMKMPLK----DDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSAC 279
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
A A + G+ HG V ++ + S+ ALI Y KCG AR FD +
Sbjct: 280 AQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRR--SAVS 337
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AMI+G +G E A+ +F+ M++ +KP+S +F+++L AC HAG VD F+ M
Sbjct: 338 WTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMV 397
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
+ +G++P EH+GCMVDL GR+G+L +A + + ++P P V+ +LLGAC H N L
Sbjct: 398 NTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLA 457
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ +L E++PEN V+LSNIYA G+W+DV +R+ + ++L K PG S
Sbjct: 458 GQVKRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWS 510
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 120/318 (37%), Gaps = 69/318 (21%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGK 168
PD +N++I G S A +LF +M+ + +P +L A A+ AL G
Sbjct: 67 NPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGL 126
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF---------- 218
+ H + L+ + T LISMY +C +AR+ FD+ I+P+ A+
Sbjct: 127 QLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEM-IEPNIVAWNAIVAACFRC 185
Query: 219 --------------------WNAMISGYGRNGEYESAVEIFDLM---------------- 242
WN M++GY + GE + A E+F M
Sbjct: 186 EGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFA 245
Query: 243 ---------------QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
++E ++PN S VLSAC AG + +I + G
Sbjct: 246 HNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFG-RILHGFVEKSGFLQII 304
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
++D + G LD AR + + + + +++ H GEE EM
Sbjct: 305 SVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMH---GYGEEAIRLFNEM 361
Query: 348 EPEN--PTPFVILSNIYA 363
E N P +S +YA
Sbjct: 362 EESNIKPDSITFISILYA 379
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/391 (35%), Positives = 211/391 (53%), Gaps = 41/391 (10%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
KE ++ PN VT SV S+C+ LL L GR +HGL++K+ + D ++ +LVD Y KC
Sbjct: 295 KEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSR-DPIVTNSLVDFYAKCQM 353
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A VF+ + D WNS+IS
Sbjct: 354 NRDARYVFETIS------------------------------------DRDVVAWNSIIS 377
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI-RADLN 180
FSQ G +EA +LF +M+ ++P + SVLSACA L+AL++G H + + R L+
Sbjct: 378 AFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLS 437
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + TAL++ Y KCG AR FD + K W+AMISGYG G ++ IF
Sbjct: 438 SNVYVGTALLTFYAKCGDAESARVIFDGMDQKS--TVTWSAMISGYGIQGNGRGSLSIFG 495
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + ++KPN F ++LSAC H G + + ++FTM+ D+ L P +H+ CMVDLL R+
Sbjct: 496 DMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARA 555
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GRL EA + I+++P +P VS++ + L C H DLGE ++ E+ P + +V++
Sbjct: 556 GRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLELHPGDACYYVLMC 615
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+YA RW V ++R+++ R L K PG S
Sbjct: 616 NLYASDARWSKVKQVRELMKQRGLMKTPGCS 646
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 42/327 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ CL E ++V F V+ AC+ GR+VH +K D+ + T LVDMY KCG
Sbjct: 94 MRVCLK-ECDNVVFSHVLKACSESRNFDEGRKVHCQIVKF-GNPDSFVFTGLVDMYAKCG 151
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ C+ +VF E RN+ +W+ SMI
Sbjct: 152 EIECSRSVFDE-NLDRNVFSWS-----------------------------------SMI 175
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+G+ Q + + LF +M+ + + + ++ AC L AL GK HG++I+ +
Sbjct: 176 AGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIE 235
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ TAL+ +Y KCG AR FD E+ D W AMI GY +NG E A+++F
Sbjct: 236 LGSYLVTALLDLYAKCGVVRDARSVFD--ELHGIDIVSWTAMIVGYTQNGCPEEALKLFL 293
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+Q V PN + +V S+C +++ I + P + +VD +
Sbjct: 294 QKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTN--SLVDFYAKC 351
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGA 327
+AR + + + V ++S++ A
Sbjct: 352 QMNRDARYVFETISDRDVVAWNSIISA 378
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 137/341 (40%), Gaps = 49/341 (14%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
GR + A +F+ + H PD +W +I + + + +M+
Sbjct: 51 GRLDLARLVFDTIPH----PDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVF 106
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+ VL AC++ G++ H +++ N D + T L+ MY KCG+ +R FD+
Sbjct: 107 SHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDE--- 162
Query: 212 KPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVD 268
D F W++MI+GY +N + + +F+ M++E ++ N + ++ AC G H
Sbjct: 163 NLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQG 222
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL--------------- 313
K L + + G++ ++DL + G + +AR + EL
Sbjct: 223 KWLHGYLI---KCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGY 279
Query: 314 -----PEPTVSVY---------------HSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
PE + ++ S+ +C LN +LG + ++ +P
Sbjct: 280 TQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI 339
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
L + YA D + + I+DR + I + +
Sbjct: 340 VTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFS 380
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
S C +++ L E H +++ L +D S +T L+S+Y G+ AR FD I D
Sbjct: 13 SLCDNINTLM---EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDT--IPHPD 67
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
W +I Y N E+ V ++ M+ + ++ F VL AC + + D+ ++
Sbjct: 68 FLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHC 127
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
+ FG P F +VD+ + G ++ +R + E + V + S++ ++ ++
Sbjct: 128 QI-VKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAG---YVQNN 182
Query: 336 LGEEMAMKLQEMEPE 350
L ++ + M E
Sbjct: 183 LAQDGLVLFNRMREE 197
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 219/385 (56%), Gaps = 12/385 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ TF S++ C ++ G+ +H +K+ SD + T L+D+Y + G + A
Sbjct: 125 EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 180
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +++++ M+ +G + A LF+G+ D WN MI G++Q G
Sbjct: 181 LFDTMP-EKSLVSLTAMLTCYAKHGELDAARVLFDGMEER----DGVCWNVMIDGYTQNG 235
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF +M P+ V SVLSAC L AL+ G+ H ++ + + + T
Sbjct: 236 MPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT 295
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD+ + K D WN+MI GY +G + A+++F M + +
Sbjct: 296 ALVDMYSKCGSLEDARLVFDKIDDK--DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGL 353
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + +F+ +LSACGH+G V + IF M D++G++PK EH+GCMV+LLGR+G +++A
Sbjct: 354 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 413
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL++ + EP ++ +LLGAC H LGE++ L + N +++LSNIYA +G
Sbjct: 414 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 473
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R M+ D + K PG S+
Sbjct: 474 NWDGVARLRTMMKDSGVKKEPGCSS 498
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 40/299 (13%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
GR + ++ LF G +P+ W ++I G + G+ +A + +M + G+ P+
Sbjct: 76 GRLDYSVALF------GRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAF 129
Query: 150 CVTSVLSACA-------DLSALKLGKETH--------------GHVIRA----DLNKDES 184
+S+L C A+KLG ++ G V+ A D ++S
Sbjct: 130 TFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 189
Query: 185 MA--TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TA+++ Y K G+ AR FD E + D WN MI GY +NG A+ +F M
Sbjct: 190 LVSLTAMLTCYAKHGELDAARVLFDGMEER--DGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ K KPN + ++VLSACG G ++ + + ++++ G++ +VD+ + G
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCGS 306
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
L++AR + ++ + V ++S++ H S ++ +M + P N T ILS
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 211/373 (56%), Gaps = 8/373 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+ A LL + GRQ+H + SD + TAL+ MY CGC+ A +F + R
Sbjct: 145 VLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGV-CFR 203
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++ WN M+AG G + A LFE + + + +W ++I+G++Q+ EA +F
Sbjct: 204 DVAFWNAMVAGYAKVGDVDNARHLFERMP----ERNVISWTAVIAGYAQMDRPNEAITMF 259
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+MQ + P + + LSACA L AL+LG+ H ++ + L+K + ALI MY KC
Sbjct: 260 RRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKC 319
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G+ A F E K W +MI G +G A+E+F M++ ++KPN +FVA
Sbjct: 320 GKIEKALEVFKNMEHK--SVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVA 377
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
+LSAC H G V+ F M +G+KPK +H+GCM+DLLGR+G L EA+EL+R +P E
Sbjct: 378 ILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFE 437
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
++ SLL A H +++LG++ L ++EP N + +LSNIYA +W + G +R
Sbjct: 438 ANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVR 497
Query: 376 QMINDRQLTKLPG 388
+++ D + K+PG
Sbjct: 498 KVMRDTGVKKMPG 510
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 50/312 (16%)
Query: 101 FEGLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
F +H F +PD +N++I S + EA L+ ++ ++ + + VL
Sbjct: 88 FSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLK 147
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
A L A+ +G++ H I L D + TALI MY CG S AR+ FD + D
Sbjct: 148 AVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFR--DV 205
Query: 217 AFWNAMISGYGRNGEYES-------------------------------AVEIFDLMQQE 245
AFWNAM++GY + G+ ++ A+ +F MQ E
Sbjct: 206 AFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE 265
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+V+P+ + +A LSAC H G ++ I +D GL ++D+ + G++++
Sbjct: 266 EVEPDEIAMLAALSACAHLGALELGEWIHNYIDKH-GLSKIVPLNNALIDMYAKCGKIEK 324
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-----AMKLQEMEPENPTPFVILSN 360
A E+ + + +V + S++ H LG E M+ ++P T ILS
Sbjct: 325 ALEVFKNMEHKSVITWTSMIDGLALH---GLGREALEMFSCMERNRIKPNEITFVAILSA 381
Query: 361 -IYAGL---GRW 368
+ GL GRW
Sbjct: 382 CCHVGLVEMGRW 393
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ + ++ +SACA L L+ G +H K + AL+DMY KCG + A
Sbjct: 268 EPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALE 327
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++++TW +MI G+ L+G +A+E+F + KP+ T+ +++S +G
Sbjct: 328 VFKNME-HKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 128 M 128
+
Sbjct: 387 L 387
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/382 (38%), Positives = 216/382 (56%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ V +SV+SAC+ LL + G+ VHGL +K+ ++ + AL+ MY C + A +F
Sbjct: 288 DEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLF 347
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E + ++WN+MI+G + G EKA LF+ + + D +W++MISG++Q
Sbjct: 348 SE-SCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK----DNVSWSAMISGYAQQDRF 402
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF++MQ G P + SV+SAC L+AL GK H ++ + L + + T L
Sbjct: 403 TETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTL 462
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MYMK G A F E K + WNA+I G NG + +++ F M++ V P
Sbjct: 463 INMYMKLGCVEDALEVFKGLEEK--GVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTP 520
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FVAVL AC H G VD+ + F M + + P +H+GCMVDLLGR+G L EA EL
Sbjct: 521 NEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL 580
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P P VS + +LLGAC + +++ GE + KL E+ P++ V+LSNIYA G W
Sbjct: 581 IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNW 640
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV +R M+ + K PG S
Sbjct: 641 VDVLEVRGMMRQHGVVKTPGCS 662
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 173/377 (45%), Gaps = 68/377 (18%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T+ + +C+ L G+ + LK+ SD I L++MY CG L A VF
Sbjct: 125 DNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVF 184
Query: 70 QELKGSR--NILTWNTMIAGMMLNGRSEKAMELFE------------------------- 102
GS ++++WN+M+AG +L G E+A ++++
Sbjct: 185 D---GSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEE 241
Query: 103 --GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
L +E + D +W+++IS + Q M EA LF++M + G++ V SVLSAC+
Sbjct: 242 ACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSR 301
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISM---------------------------- 192
L + GK HG V++ + ++ ALI M
Sbjct: 302 LLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSM 361
Query: 193 ---YMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
Y+KCG+ AR FD PD D W+AMISGY + + + +F MQ E K
Sbjct: 362 ISGYVKCGEIEKARALFDSM---PDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTK 418
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ V+V+SAC H +D+ I + + GLK ++++ + G +++A E
Sbjct: 419 PDETILVSVISACTHLAALDQGKWIHAYIRKN-GLKINIILGTTLINMYMKLGCVEDALE 477
Query: 309 LIRELPEPTVSVYHSLL 325
+ + L E VS +++L+
Sbjct: 478 VFKGLEEKGVSTWNALI 494
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 162/367 (44%), Gaps = 47/367 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +SVISAC L L G+ +H K + + ++GT L++MY+K GC+ A
Sbjct: 418 KPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALE 477
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L+ + + TWN +I G+ +NG +K+++ F + G P+ T+ +++ +G
Sbjct: 478 VFKGLE-EKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMG 536
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + F M Q + P++K C+ +L L KE + + D
Sbjct: 537 LVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGML------KEAEELIESMPMAPDV 590
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISG-YGRNGEYESAVEIFDL 241
S AL+ K G R + E+ PD F N ++S Y G + +E+ +
Sbjct: 591 STWGALLGACKKYGDNETGERIGRKLVELHPDHDGF-NVLLSNIYASKGNWVDVLEVRGM 649
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+Q V +++ A G ++ + D P+ EH M+D + +
Sbjct: 650 MRQHGVVKTPGC--SMIEAHG---------RVHEFLAGD-KTHPQNEHIEHMLDEMAKKL 697
Query: 302 RLD----EAREL---IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+L+ + RE+ I E + T HS E++A+ + + PTP
Sbjct: 698 KLEGYAPDTREVSLDIDEEEKETTLFRHS--------------EKLAIAFGLIAIDPPTP 743
Query: 355 FVILSNI 361
I+ N+
Sbjct: 744 IRIVKNL 750
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ N+M+ G+ Q +A +++ M + + + +C+ A GK
Sbjct: 89 PNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCI 148
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HV++ + D + LI+MY CG S AR+ FD + D WN+M++GY G
Sbjct: 149 QDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVL--DMVSWNSMLAGYVLVG 206
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
E A +++D M + V +++ V G G+V++A ++F M
Sbjct: 207 NVEEAKDVYDRMPERNVIASNSMIVLF----GKKGNVEEACKLFNEM 249
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 217/387 (56%), Gaps = 39/387 (10%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +PN+V S + ACAS+ ++ G+++HG LK + + +AL+DMY KCG L
Sbjct: 444 LGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDL 503
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+H +F ++ D TWNSMIS F+
Sbjct: 504 SHYMFSKMSAK------------------------------------DEVTWNSMISSFA 527
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA LF +M G+ + ++S+LSACA L A+ GKE HG +I+ + D
Sbjct: 528 QNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLF 587
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ALI MY KCG A R F+ K + WN++IS YG +G + +V++ MQ+
Sbjct: 588 AESALIDMYGKCGNLELALRVFEHMPEK--NEVSWNSIISAYGAHGLVKESVDLLCCMQE 645
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E K + +F+A++SAC HAG V + L++F M +++ ++P+ EH CMVDL R+G+LD
Sbjct: 646 EGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLD 705
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A + I ++P +P ++ +LL AC H N +L E + +L +++P N +V++SNI A
Sbjct: 706 KAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNCGYYVLMSNINA 765
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+ V ++R+++ D+++ K+PG S
Sbjct: 766 VAGRWDGVSKMRRLMKDKKVQKIPGYS 792
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 47/324 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T +S CA+ L G Q+H L +K + + + LV MY KC CL
Sbjct: 245 DPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCL----- 299
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQ 125
E+A LF G P D TWN MISG Q
Sbjct: 300 ---------------------------EEAWRLF------GLMPRDDLVTWNGMISGCVQ 326
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ +A +LF MQ +G+ P + S+L A +L+ K GKE HG+++R + D +
Sbjct: 327 NGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFL 386
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+AL+ +Y KC A+ FD K D + MISGY N E+AV++F +
Sbjct: 387 VSALVDIYFKCRDVRMAQNVFDA--TKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLAL 444
Query: 246 KVKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+KPN+ + L AC A + + L + + + G + ++D+ + GRL
Sbjct: 445 GIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVES---ALMDMYSKCGRL 501
Query: 304 DEARELIRELPEPTVSVYHSLLGA 327
D + + ++ ++S++ +
Sbjct: 502 DLSHYMFSKMSAKDEVTWNSMISS 525
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ T V+ +CA+L L GR VH T + D +G+AL+ MY G L A
Sbjct: 142 SPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGA 201
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF +G E+ D WN M+ G+ +
Sbjct: 202 REVF---------------------DGMDER---------------DCVLWNVMMDGYVK 225
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G A LF M+++G P+ + LS CA + L G + H ++ L + ++
Sbjct: 226 AGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAV 285
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A L+SMY KC A R F + DD WN MISG +NG + A+ +F MQ+
Sbjct: 286 ANTLVSMYAKCQCLEEAWRLFGL--MPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKS 343
Query: 246 KVKPNSASFVAVLSA 260
++P+S + ++L A
Sbjct: 344 GLQPDSVTLASLLPA 358
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 7/250 (2%)
Query: 82 NTMIAGM-MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM- 139
T + GM +L R A+ +F L WN +I GF+ G A + KM
Sbjct: 79 QTRLVGMYVLARRFRDAVAVFSSLPRAAAAAA-LPWNWLIRGFTMAGHHRLAVLFYVKMW 137
Query: 140 -QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
+ P + V+ +CA L AL LG+ H L++D + +ALI MY G
Sbjct: 138 AHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGL 197
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
AR FD + + D WN M+ GY + G+ SAV +F +M+ PN A+ L
Sbjct: 198 LDGAREVFDGMDER--DCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFL 255
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
S C + +Q+ T+ +GL+P+ +V + + L+EA L +P +
Sbjct: 256 SVCAAEADLLSGVQLHTLA-VKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDL 314
Query: 319 SVYHSLLGAC 328
++ ++ C
Sbjct: 315 VTWNGMISGC 324
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 211/373 (56%), Gaps = 8/373 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+ A LL + GRQ+H + SD + TAL+ MY CGC+ A +F + R
Sbjct: 145 VLKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGV-CFR 203
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++ WN M+AG G + A LFE + + + +W ++I+G++Q+ EA +F
Sbjct: 204 DVAFWNAMVAGYAKVGDVDNARHLFERMP----ERNVISWTAVIAGYAQMDRPNEAITMF 259
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+MQ + P + + LSACA L AL+LG+ H ++ + L+K + ALI MY KC
Sbjct: 260 RRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKC 319
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G+ A F E K W +MI G +G A+E+F M++ ++KPN +FVA
Sbjct: 320 GKIEKALEVFKNMEHK--SVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVA 377
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
+LSAC H G V+ F M +G+KPK +H+GCM+DLLGR+G L EA+EL+R +P E
Sbjct: 378 ILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFE 437
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
++ SLL A H +++LG++ L ++EP N + +LSNIYA +W + G +R
Sbjct: 438 ANAPIWGSLLAAARIHGDAELGKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVR 497
Query: 376 QMINDRQLTKLPG 388
+++ D + K+PG
Sbjct: 498 KVMRDTGVKKMPG 510
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 138/312 (44%), Gaps = 50/312 (16%)
Query: 101 FEGLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
F +H F +PD +N++I S + EA L+ ++ ++ + + VL
Sbjct: 88 FSHYSHSIFTHKTRPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLK 147
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
A L A+ +G++ H I L D + TALI MY CG S AR+ FD + D
Sbjct: 148 AVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFR--DV 205
Query: 217 AFWNAMISGYGRNGEYES-------------------------------AVEIFDLMQQE 245
AFWNAM++GY + G+ ++ A+ +F MQ E
Sbjct: 206 AFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLE 265
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+V+P+ + +A LSAC H G ++ I +D GL ++D+ + G++++
Sbjct: 266 EVEPDEIAMLAALSACAHLGALELGEWIHNYIDKH-GLSKIVPLNNALIDMYAKCGKIEK 324
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-----AMKLQEMEPENPTPFVILSN 360
A E+ + + +V + S++ H LG E M+ ++P T ILS
Sbjct: 325 ALEVFKNMEHKSVITWTSMIDGLALH---GLGREALEMFSCMERNRIKPNEITFVAILSA 381
Query: 361 -IYAGL---GRW 368
+ GL GRW
Sbjct: 382 CCHVGLVEMGRW 393
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ + ++ +SACA L L+ G +H K + AL+DMY KCG + A
Sbjct: 268 EPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALE 327
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++++TW +MI G+ L+G +A+E+F + KP+ T+ +++S +G
Sbjct: 328 VFKNME-HKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVG 386
Query: 128 M 128
+
Sbjct: 387 L 387
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 237/416 (56%), Gaps = 37/416 (8%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT +++SA A + L+ G++ H ++ +SD ++ +++VDMY KC + CA VF
Sbjct: 300 DSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVF 359
Query: 70 Q------------------ELKGSR----------------NILTWNTMIAGMMLNGRSE 95
EL S N+++WN++I G + +G+
Sbjct: 360 NSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVN 419
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A ++F + G +P+ TW ++ISG ++ G +EA F++MQ G+ P++ + VL
Sbjct: 420 EAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVL 479
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC +L++L++G+ HG++IR L +AT+L+ MY KCG A+R FD I +
Sbjct: 480 LACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDM--IPDKE 537
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMISG+ +G+ A+ ++ +++E +KP++ +F L AC HA V + L++F
Sbjct: 538 LPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFV 597
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M + + P EH+GCMV LL R G LDEA LI +P +P V + SLL AC H
Sbjct: 598 DMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKI 657
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E ++ +L +++P+N +V +SN YA GRW++V ++RQ++ +R L K+PG S
Sbjct: 658 ELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCS 713
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 170/381 (44%), Gaps = 44/381 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT S +SA A+L LQ G+Q H + + + T +G++L++ Y K G + A +
Sbjct: 197 EPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAES 256
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D TWN +ISG+ Q+G
Sbjct: 257 VFSRM------------------------------------LEKDVVTWNLLISGYVQIG 280
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + M+ + + +++SA AD+ LKLGKE H + IR +L D + +
Sbjct: 281 EVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVS 340
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+++ MY KC + ARR F+ K D WN M++ + G A+ +F MQ E V
Sbjct: 341 SIVDMYAKCEKIGCARRVFNSSITK--DLILWNTMLAAFAELGHSGEALNLFYQMQLESV 398
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ +++ ++G V++A +F M G++P + ++ L RSG EA
Sbjct: 399 PPNVISWNSLILGFLNSGQVNEAKDMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEAI 457
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIY 362
+ + E P V +L AC + +G + L P L ++Y
Sbjct: 458 LTFQRMQEAGVKPNVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMY 517
Query: 363 AGLGRWEDVGRIRQMINDRQL 383
A G + R+ MI D++L
Sbjct: 518 AKCGDRDQAKRVFDMIPDKEL 538
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 127/298 (42%), Gaps = 57/298 (19%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L GRQ+H +K + I T LV Y KC ++++F+ ++
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR- 74
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD---------------------- 112
+N+ +W +I G ++A+ F+ + G PD
Sbjct: 75 LKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKV 134
Query: 113 ------------------------------PATWNSMISGFSQLGMRFEAFKLFEKMQST 142
WNSMI G+ Q G+ EA ++F +M+
Sbjct: 135 VHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREE 194
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G+ P+ ++S LSA A+L AL+ GK+ H + + ++ ++LI+ Y K G A
Sbjct: 195 GVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDA 254
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
F + K D WN +ISGY + GE + A+ + LM+ E ++ +S + ++SA
Sbjct: 255 ESVFSRMLEK--DVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSA 310
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 154 VLSACADLSALKLGKETHGHVIR--ADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+L C AL G++ H +++ A +E + T L+ Y KC P + F + +
Sbjct: 16 LLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRL 75
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
K + W A+I R G Y+ A+ F MQ+ + P++ VL ACG
Sbjct: 76 K--NVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACG 124
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 210/384 (54%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF V+ AC LL L G+++H +K+ +T + L+ +Y CGC+ A +
Sbjct: 105 PNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVM 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +PD A+W++M+SG++Q G
Sbjct: 165 FDEMP------------------------------------EPDSASWSTMVSGYAQNGQ 188
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA KLF +MQ+ + + SV+ C DL AL LGK H ++ + + D + TA
Sbjct: 189 AVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVVLGTA 248
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + F + D W+ MI+GY +G E A+++FD M++ K
Sbjct: 249 LVGMYSKCGSLDNALKVFQG--MAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTI 306
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F +VLSAC H+G V+K QIF M ++ + P+ +H+GCMVDL R+G + A +
Sbjct: 307 PNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHK 366
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP V ++ +LLGAC H DLGE ++ K+ +++P +P +V++SN+YA LGR
Sbjct: 367 FIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGR 426
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W V ++R ++ D+ K G S+
Sbjct: 427 WSSVCQVRSLMKDKAPKKQHGWSS 450
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 9/276 (3%)
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
+ + L+G A +F H P+ WN++I G+S A L+ M G+
Sbjct: 49 SAVTLSGHVAYAHRIFSCTHH----PNLFMWNTIIRGYSISDSPITAIALYRDMFLCGIS 104
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
P+ VL AC L L G+E H +++ L+ + + LI +Y CG +A
Sbjct: 105 PNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVM 164
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
FD E+ D A W+ M+SGY +NG+ A+++F MQ E V ++ + +V+ CG G
Sbjct: 165 FD--EMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLG 222
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+D + + MD + G+K +V + + G LD A ++ + + E V+ + +++
Sbjct: 223 ALDLGKWVHSYMDKE-GVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMI 281
Query: 326 GACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
H + + ++ AMK + P T +LS
Sbjct: 282 AGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLS 317
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 221/389 (56%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C G +HG K+ ++ M+GTA++ MY K +
Sbjct: 57 EPNHITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKK 116
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M NG+ + A+++F+ + + D +W +MI+GF
Sbjct: 117 ARLVFDYME-DKNSVTWNTMIDGYMRNGQVDNAVKMFDKMP----ERDLISWTAMINGFV 171
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 172 KKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVK 231
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 232 VSNSLIDLYCRCGCVEFAREVFDKMEKRT--VVSWNSVIVGFAANGNAHESLVYFRKMQE 289
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F L+AC H G V++ L+ F M D + P+ EH+GC+VDL R+GRL+
Sbjct: 290 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLE 349
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
EA ++++ +P +P V SLL AC H N+ + E MK L ++ + + +VILSN+Y
Sbjct: 350 EALKVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDVNVKGHSNYVILSNMY 409
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 410 AADGKWEGASQMRRKMKGLGLKKQPGFSS 438
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 130/315 (41%), Gaps = 77/315 (24%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S I++W + I + NGR +A + F + G +P+ T+ +++SG
Sbjct: 22 SETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSG------------ 69
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLS--ALKLGKETHGHVIRADLNKDESM-ATALIS 191
C D S + LG HG+ + ++ M TA++
Sbjct: 70 -----------------------CGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILG 106
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL---------- 241
MY K + AR FD E K + WN MI GY RNG+ ++AV++FD
Sbjct: 107 MYSKHSRVKKARLVFDYMEDK--NSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWT 164
Query: 242 ---------------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDD 279
MQ VKP+ + +A L+AC + G + L + +M
Sbjct: 165 AMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQ 224
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
DF K + ++DL R G ++ ARE+ ++ + TV ++S++ + N+ E
Sbjct: 225 DFKNNVKVSN--SLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA---HE 279
Query: 340 MAMKLQEMEPENPTP 354
+ ++M+ E P
Sbjct: 280 SLVYFRKMQEEGFKP 294
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 221/389 (56%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C +HG K+ ++ M+GTA++ MY K G +
Sbjct: 59 EPNHITFIALLSGCGDFPSGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKK 118
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ N +TWNTMI G M +G+ + A+++F+ + D +W +MI+GF
Sbjct: 119 ARLVFDYME-DINSVTWNTMIDGYMRSGQVDNAVKMFDKMPER----DLISWTAMINGFV 173
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 174 KKGFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVR 233
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 234 VSNSLIDLYCRCGCVEFAREVFDKMEKRT--VVSWNSVIVGFAANGNAHESLVYFRKMQE 291
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F L+AC H G V++ L+ F M D+G+ P+ EH+GC+VDL R+GRL+
Sbjct: 292 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRAGRLE 351
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A ++I +P +P V SLL AC H N+ + E MK L ++ ++ + +VILSN+Y
Sbjct: 352 DALKVIESMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDLNVKSHSNYVILSNMY 411
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 412 AADGKWEGASQMRRKMKGLGLKKQPGFSS 440
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 129/318 (40%), Gaps = 83/318 (26%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S ++W + I + NGR +A + F + G +P+ T+ +++SG
Sbjct: 24 SETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSG------------ 71
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET-----HGHVIRADLNKDESM-ATA 188
C D + G ET HG+ + L++ M TA
Sbjct: 72 -----------------------CGDFPS---GSETLSNLLHGYACKLGLDRTHVMVGTA 105
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL------- 241
+I MY K G AR FD E + WN MI GY R+G+ ++AV++FD
Sbjct: 106 IIGMYSKRGHVKKARLVFDYME--DINSVTWNTMIDGYMRSGQVDNAVKMFDKMPERDLI 163
Query: 242 ------------------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-M 276
MQ V+P+ + +A L+AC + G + L + +
Sbjct: 164 SWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALNACTNLGALSFGLWVHRYV 223
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDL 336
M+ DF K ++DL R G ++ ARE+ ++ + TV ++S++ + N+
Sbjct: 224 MNQDF--KNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNA-- 279
Query: 337 GEEMAMKLQEMEPENPTP 354
E + ++M+ E P
Sbjct: 280 -HESLVYFRKMQEEGFKP 296
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 219/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SVT + V+SAC+ + ++VH + + + + ALV+ Y CG + A +
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ +K +R++++W +++ G + G + A F+ + D +W MI G+ + G
Sbjct: 294 FRSMK-ARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGC 348
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ ++F +MQS GM+P + SVL+ACA L +L++G+ ++ + + D + A
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A++ F + + D W AM+ G NG+ + A+++F MQ ++
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQR--DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ VLSAC H+G VD+A + F M D ++P H+GCMVD+LGR+G + EA E
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++R++P P V+ +LLGA H + + E A K+ E+EP+N + +L NIYAG R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+D+ +R+ I D + K PG S
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFS 609
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 161/338 (47%), Gaps = 16/338 (4%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L G+++H +K S+ + ALV MY CG + A VF + ++ +WN MI+
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMIS 209
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G E+++EL + P T ++S S++ + ++ E + P
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
SL+ ++++A A + + + R+ +D T+++ Y++ G AR +F
Sbjct: 270 SLRLENALVNAYAACGEMDIAV----RIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
DQ ++ D W MI GY R G + ++EIF MQ + P+ + V+VL+AC H G
Sbjct: 326 DQMPVR--DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
++ I T +D + +K ++D+ + G ++A+++ ++ + + +++
Sbjct: 384 LEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 327 ACWCHLNSDLGEE---MAMKLQEM--EPENPTPFVILS 359
N+ G+E + ++Q+M +P++ T +LS
Sbjct: 443 GL---ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 8/237 (3%)
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
L G A +LF + +PD WN+MI G+S++ E +L+ M G+ P
Sbjct: 80 LGGHVSYAYKLFVKIP----EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSH 135
Query: 150 CVTSVLSACA-DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+L+ D AL GK+ H HV++ L + + AL+ MY CG AR FD+
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+D WN MISGY R EYE ++E+ M++ V P S + + VLSAC D
Sbjct: 196 R--CKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKD 253
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + + +P +V+ G +D A + R + V + S++
Sbjct: 254 LCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 219/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SVT + V+SAC+ + ++VH + + + + ALV+ Y CG + A +
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ +K +R++++W +++ G + G + A F+ + D +W MI G+ + G
Sbjct: 294 FRSMK-ARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGC 348
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ ++F +MQS GM+P + SVL+ACA L +L++G+ ++ + + D + A
Sbjct: 349 FNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNA 408
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A++ F + + D W AM+ G NG+ + A+++F MQ ++
Sbjct: 409 LIDMYFKCGCSEKAQKVFHDMDQR--DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ VLSAC H+G VD+A + F M D ++P H+GCMVD+LGR+G + EA E
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++R++P P V+ +LLGA H + + E A K+ E+EP+N + +L NIYAG R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+D+ +R+ I D + K PG S
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFS 609
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 161/338 (47%), Gaps = 16/338 (4%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L G+++H +K S+ + ALV MY CG + A VF + ++ +WN MI+
Sbjct: 151 LACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RCKEDVFSWNLMIS 209
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G E+++EL + P T ++S S++ + ++ E + P
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
SL+ ++++A A + + + R+ +D T+++ Y++ G AR +F
Sbjct: 270 SLRLENALVNAYAACGEMDIAV----RIFRSMKARDVISWTSIVKGYVERGNLKLARTYF 325
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
DQ ++ D W MI GY R G + ++EIF MQ + P+ + V+VL+AC H G
Sbjct: 326 DQMPVR--DRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGS 383
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
++ I T +D + +K ++D+ + G ++A+++ ++ + + +++
Sbjct: 384 LEIGEWIKTYIDKN-KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVV 442
Query: 327 ACWCHLNSDLGEE---MAMKLQEM--EPENPTPFVILS 359
N+ G+E + ++Q+M +P++ T +LS
Sbjct: 443 GL---ANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 8/237 (3%)
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
L G A +LF + +PD WN+MI G+S++ E +L+ M G+ P
Sbjct: 80 LGGHVSYAYKLFVKIP----EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSH 135
Query: 150 CVTSVLSACA-DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+L+ D AL GK+ H HV++ L + + AL+ MY CG AR FD+
Sbjct: 136 TFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR 195
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+D WN MISGY R EYE ++E+ M++ V P S + + VLSAC D
Sbjct: 196 R--CKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKD 253
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + + +P +V+ G +D A + R + V + S++
Sbjct: 254 LCKRVHEYV-SECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIV 309
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 218/385 (56%), Gaps = 12/385 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ TF S++ C ++ G+ +H +K+ SD + T L+D+Y + G + A
Sbjct: 72 EPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQ 127
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +++++ M+ +G + A LF+G+ D WN MI G++Q G
Sbjct: 128 LFDTMP-EKSLVSLTAMLTCYAKHGELDAARVLFDGMEER----DGVCWNVMIDGYTQNG 182
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF +M P+ V SVLSAC L AL+ G+ H ++ + + + T
Sbjct: 183 MPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGT 242
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR FD+ + K D WN+MI GY G + A+++F M + +
Sbjct: 243 ALVDMYSKCGSLEDARLVFDKIDDK--DVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGL 300
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + +F+ +LSACGH+G V + IF M D++G++PK EH+GCMV+LLGR+G +++A
Sbjct: 301 HPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAY 360
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL++ + EP ++ +LLGAC H LGE++ L + N +++LSNIYA +G
Sbjct: 361 ELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVG 420
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W+ V R+R M+ D + K PG S+
Sbjct: 421 NWDGVARLRTMMKDSGVKKEPGCSS 445
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 38/263 (14%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
GR + ++ LF G +P+ W ++I G + G+ +A + +M + G+ P+
Sbjct: 23 GRLDYSVALF------GRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAF 76
Query: 150 CVTSVLSACA-------DLSALKLGKETH--------------GHVIRA----DLNKDES 184
+S+L C A+KLG ++ G V+ A D ++S
Sbjct: 77 TFSSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKS 136
Query: 185 MA--TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TA+++ Y K G+ AR FD E + D WN MI GY +NG A+ +F M
Sbjct: 137 LVSLTAMLTCYAKHGELDAARVLFDGMEER--DGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ K KPN + ++VLSACG G ++ + + ++++ G++ +VD+ + G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN-GIQFNVHVGTALVDMYSKCGS 253
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
L++AR + ++ + V ++S++
Sbjct: 254 LEDARLVFDKIDDKDVVAWNSMI 276
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 208/383 (54%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +V+ ACA L+ G+ VH + + QS+ + AL+DMY KCG + A++V
Sbjct: 97 PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSV 156
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ D +WN+MI G+S+ +
Sbjct: 157 FLEMP------------------------------------VKDIISWNTMIGGYSKNSL 180
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF M M P + +L ACA L++L GKE HGH++R D+ +A A
Sbjct: 181 PNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY+KCG P AR FD K D W MI+GYG +G +A+ F+ M+Q ++
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTK--DLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF+++L AC H+G +D+ + F +M D+ +KPK EH+ C+VDLL RSG+L A +
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP +++ +LL C H + L E++A + E+EPEN +V+L+N YA +
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE+V ++RQ I R L K PG S
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCS 440
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 149/351 (42%), Gaps = 45/351 (12%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+S++ ACA+ + GR VHG +K T L+DMY KCG L A VF +L
Sbjct: 2 VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVF-DLMS 60
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
R ++TW S+I+ +++ G+ EA +
Sbjct: 61 VRTVVTWT-----------------------------------SLIAAYAREGLSDEAIR 85
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
LF +M G+ P + +T+VL ACA +L+ GK+ H ++ D+ + + AL+ MY
Sbjct: 86 LFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYA 145
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG A F + +K D WN MI GY +N A+ +F M E +KP+ +
Sbjct: 146 KCGSMEDANSVFLEMPVK--DIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTL 202
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+L AC +D+ ++ + + G Q+ +VD+ + G AR L +P
Sbjct: 203 ACILPACASLASLDRGKEVHGHILRN-GFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 261
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIYA 363
+ + ++ H G EM P +S +YA
Sbjct: 262 TKDLITWTVMIAGYGMH---GFGNNAITTFNEMRQAGIEPDEVSFISILYA 309
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 161/367 (43%), Gaps = 35/367 (9%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+ T ++ ACASL L G++VHG L+ SD + ALVDMY+KCG +P
Sbjct: 193 LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCG-VPV 251
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ ++ +++++TW MIAG ++G A+ F + G +PD ++ S++ S
Sbjct: 252 LARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACS 311
Query: 125 QLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ E ++ F MQ V P L+ C+ +L+ L+ + + +
Sbjct: 312 HSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM------AYKFIKSMPIE 365
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D ++ AL+S A + + FE++P++ ++ + + Y ++E ++
Sbjct: 366 PDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVKKLR 425
Query: 240 DLMQQEKVKPNSAS-----------FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
+ + +K N F+A S+ A ++ L+ + G PK
Sbjct: 426 QKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEEGYFPKTR 485
Query: 289 HFGCMVD-------LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH-----LNSDL 336
+ D L G S +L A ++ P T+ V +L CH ++ L
Sbjct: 486 YALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHEMAKFISKTL 545
Query: 337 GEEMAMK 343
G E+ ++
Sbjct: 546 GREIVLR 552
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ S+L ACA+ + LG+ HG ++A ++ + L+ MY KCG A FD
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
++ W ++I+ Y R G + A+ +F M +E V P+ + VL AC G ++
Sbjct: 61 VRT--VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118
Query: 271 LQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ + ++ + F C ++D+ + G +++A + E+P + +++++G
Sbjct: 119 KDVHNYIREN---DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGG- 174
Query: 329 WCHLNSDLGEEMAM---KLQEMEPENPTPFVIL 358
NS E +++ + EM+P+ T IL
Sbjct: 175 -YSKNSLPNEALSLFGDMVLEMKPDGTTLACIL 206
>gi|347954508|gb|AEP33754.1| chloroplast biogenesis 19, partial [Nasturtium officinale]
Length = 447
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 222/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C G +HG K+ ++ M+GTA++ MY K G
Sbjct: 15 EPNHITFIALLSGCGDFPSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFRK 74
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F ++ +N +TWNTMI G M +G+ A++LF+ E D +W +M++GF
Sbjct: 75 ARLIFDYME-DKNSVTWNTMIDGYMRSGQVNTAVKLFD----EMLNRDLISWTAMVNGFV 129
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 130 KKGFHEEALSWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVMSQDFKNNVR 189
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 190 VSNSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGNAHESLFYFRKMQE 247
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F L+AC H G V++ L+ F M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 248 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYRISPRIEHYGCIVDLYSRAGRLE 307
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A ++++ +P +P V SLL AC H N+ L E MK L ++ ++ + +VILSN+Y
Sbjct: 308 DALKVVQSMPMKPNEVVIGSLLAACKNHGNNTLLAERLMKHLSDLNVKSHSNYVILSNMY 367
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 368 AADGKWEGASKMRRKMKGLGLKKQPGFSS 396
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 209/386 (54%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ AC L L+ GR V G ++ + ++ IG+AL+ MY KCG
Sbjct: 216 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCG------- 268
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
EL SR I F+G+ F TWN+ IS ++Q G
Sbjct: 269 ---ELVSSRRI----------------------FDGMPSRDF----ITWNAAISAYAQNG 299
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF M+ G+ P+ +T+VLSACA + AL LGK+ + L D +AT
Sbjct: 300 MADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVAT 359
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-- 245
ALI MY KCG A+R F+ K D A WNAMIS +G+ + A+ +F+ M E
Sbjct: 360 ALIDMYAKCGSLESAQRVFNDMPRKND--ASWNAMISALASHGKAKEALSLFERMSDEGG 417
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +FV++LSAC HAG VD+ ++F MM FGL PK EH+ CMVDLL R+G L E
Sbjct: 418 SARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYE 477
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I ++PE P +L AC N D+GE + L E++P N ++I S IY
Sbjct: 478 AWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYEN 537
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L W+D R+R ++ + +TK PG S
Sbjct: 538 LNMWDDAARMRALMRENGVTKTPGCS 563
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 176/373 (47%), Gaps = 53/373 (14%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L+ PN+ TF V ACA+L ++ R H K+ +D ++V MY +CG
Sbjct: 109 KTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGEN 168
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ +EK D +WNS++SG
Sbjct: 169 GVARKVFDEI---------------------TEK---------------DLVSWNSLLSG 192
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+++LG EA ++F ++ + +G P + SVL AC +L L+LG+ G V+ +
Sbjct: 193 YAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKV 252
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + +ALISMY KCG+ +RR FD + D WNA IS Y +NG + A+ +F
Sbjct: 253 NSYIGSALISMYSKCGELVSSRRIFDGMPSR--DFITWNAAISAYAQNGMADEAISLFHS 310
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLL 297
M++ V PN + AVLSAC G +D Q+ D++ +H ++D+
Sbjct: 311 MKENGVDPNKVTLTAVLSACASIGALDLGKQM-----DEYATHRGLQHDIFVATALIDMY 365
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPT 353
+ G L+ A+ + ++P + +++++ A H + L E M+ + P + T
Sbjct: 366 AKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDIT 425
Query: 354 PFVILSN-IYAGL 365
+LS ++AGL
Sbjct: 426 FVSLLSACVHAGL 438
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 17/265 (6%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+H P+ +N M+ + + L+ +M++ + P+ V ACA+L
Sbjct: 72 FSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLE 131
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+++ + H V + L+ D ++++MY +CG+ AR+ FD EI D WN++
Sbjct: 132 EIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFD--EITEKDLVSWNSL 189
Query: 223 ISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDD 279
+SGY + G AVE+F +++E +P+ S V+VL ACG G ++ + ++ F +
Sbjct: 190 LSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVV--- 246
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+ G+K ++ + + G L +R + +P +++ + A + + + +E
Sbjct: 247 ERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISA---YAQNGMADE 303
Query: 340 M-----AMKLQEMEPENPTPFVILS 359
+MK ++P T +LS
Sbjct: 304 AISLFHSMKENGVDPNKVTLTAVLS 328
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 223/417 (53%), Gaps = 38/417 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ + +CA+ L GRQ+H T ++ + + + + MY +CG A+ +
Sbjct: 120 PDHYTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQM 179
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEGFKPDPAT------------ 115
F+E++ R++++WN MI+G G +AM++F E +A + KPD T
Sbjct: 180 FEEMQ-YRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKAR 238
Query: 116 ---------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
WN+M++ ++ M EA +LF +MQ G+ P + +V
Sbjct: 239 VEDIALLKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATV 298
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L +C ++SAL LGK H + R + + AL+ MY CG AR FD +
Sbjct: 299 LPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR-- 356
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D W ++IS YGR+G A+++F+ M + ++P+S +FVA+L+AC HAG +D F
Sbjct: 357 DVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYF 416
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M +F + PK EH+ CMVDLLGR+G + EA + I +P +P V+ +LLGAC H N
Sbjct: 417 YSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSN 476
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
D+G A L + P+ +V+LSNIYA GRW DV +R ++ + + KLPG+S
Sbjct: 477 MDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVS 533
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP++VT +V+ +C + L G+++H + + S ++ AL+DMY CGCL A +
Sbjct: 289 EPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARD 348
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G+R++++W ++I+ +G +A++LFE + +G +PD + ++++ S G
Sbjct: 349 VFDSM-GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 407
Query: 128 MRFEAFKLFEKMQS 141
+ F M S
Sbjct: 408 LLDMGKHYFYSMTS 421
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 7/166 (4%)
Query: 111 PDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMV--PSLKCVTSVLSACADLSALKL 166
PD T +N ++ G + + +A LF M+ G P L +CA L L
Sbjct: 81 PDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATDGLVL 140
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G++ H R L+ + +A + ISMY +CG+P A + F++ + + D WNAMISG+
Sbjct: 141 GRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYR--DVVSWNAMISGF 198
Query: 227 GRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
G + A+++F +L+ + KP++ + ++L + G A D AL
Sbjct: 199 AHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIAL 244
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 214/377 (56%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C + + L GRQ+H L LK ++ +L+ +Y KCG L A VF +
Sbjct: 366 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-E 424
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R+I++W +MI G KA E F+G+A + TWN+M+ + Q G + K+
Sbjct: 425 RDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKM 480
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M S + P ++ CAD+ A KLG + GH ++A L + S+A A I+MY
Sbjct: 481 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 540
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ S A++ FD K D WNAMI+GY ++G + A + FD M + KP+ S+
Sbjct: 541 KCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISY 598
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM G+ P EHF CMVDLLGR+G L EA++LI ++P
Sbjct: 599 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 658
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N +L E A + E++ + +++L+ IY+ G+ +D +
Sbjct: 659 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 718
Query: 374 IRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 719 VRKLMRDKGIKKNPGYS 735
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 147/322 (45%), Gaps = 36/322 (11%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
+C +L + Q+ GL K + D + TALVDM+++CG + A +F +++ I
Sbjct: 137 SCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIE-RPTIF 195
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
N+M+AG + A+E FE +A D +WN MI+ SQ G EA L +M
Sbjct: 196 CRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGRVREALGLVVEM 251
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
G+ TS L+ACA L +L GK+ H VIR+ D +A+ALI +Y KCG
Sbjct: 252 HRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSF 311
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
A+R F+ + + + W +I G + + +VE+F+ M+ E + + + ++S
Sbjct: 312 KEAKRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--------------MVDLLGRSGRLDE 305
C F MD G +Q H C ++ L + G L
Sbjct: 370 GC------------FNRMDLCLG---RQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 414
Query: 306 ARELIRELPEPTVSVYHSLLGA 327
A + + E + + S++ A
Sbjct: 415 AEFVFSSMSERDIVSWTSMITA 436
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 178/391 (45%), Gaps = 25/391 (6%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ S ++ACA L L +G+Q+H ++ Q D + +AL+++Y KCG A VF
Sbjct: 259 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 318
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG-FSQ--- 125
L+ RN ++W +I G + K++ELF + E D ++ISG F++
Sbjct: 319 NSLQ-DRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDL 377
Query: 126 -LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
LG + + L + + +V S + S+ + C DL + V + +D
Sbjct: 378 CLGRQLHSLCL-KSGHNRAIVVS-NSLISLYAKCGDLQNAEF-------VFSSMSERDIV 428
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD-LMQ 243
T++I+ Y + G AR FFD + + WNAM+ Y ++G E ++++ ++
Sbjct: 429 SWTSMITAYSQIGNIIKAREFFDGMATR--NAITWNAMLGAYIQHGAEEDGLKMYSAMLS 486
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
Q+ V P+ ++V + C G QI GL + + + GR+
Sbjct: 487 QKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA-GLILNVSVANAAITMYSKCGRI 545
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA++L L V +++++ H +G++ A +M + P I + A
Sbjct: 546 SEAQKLFDLLNGKDVVSWNAMITGYSQH---GMGKQAAKTFDDMLSKGAKPDYI--SYVA 600
Query: 364 GLGRWEDVGRIRQ-MINDRQLTKLPGISAGI 393
L G +++ + +T++ GIS G+
Sbjct: 601 VLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 631
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 155/379 (40%), Gaps = 74/379 (19%)
Query: 9 PNSVT--FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
P++VT + +C S L R +HG + + S + L+ YL CG L A
Sbjct: 16 PHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDAR 75
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+ + N++T N M+ G G A ELF+ + + D A+WN+++S S+
Sbjct: 76 RLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSDTSR- 130
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
P+ ++ C L +L + G + D D +
Sbjct: 131 -------------------PAGSWMS-----CGALGCRELAPQLLGLFWKFDFWGDPDVE 166
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQ 244
TAL+ M+++CG +A R F Q E P + N+M++GY + + A+E F+ M +
Sbjct: 167 TALVDMFVRCGYVDFASRLFSQIE----RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAE 222
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V S+ +++A +G V +AL G +V++ + RLD
Sbjct: 223 RDV----VSWNMMIAALSQSGRVREAL-------------------GLVVEMHRKGVRLD 259
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYA 363
+ Y S L AC + G+++ K+ P+ +P L +YA
Sbjct: 260 S-------------TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYA 306
Query: 364 GLGRWEDVGRIRQMINDRQ 382
G +++ R+ + DR
Sbjct: 307 KCGSFKEAKRVFNSLQDRN 325
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 47/276 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT++++ CA + + G Q+ G T+K + + A + MY KCG + A +
Sbjct: 492 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 551
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L G +++++WN MI G +G ++A + F+ + +G KPD ++ +++SG S G+
Sbjct: 552 FDLLNG-KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 610
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ M G+ P L+ +
Sbjct: 611 VQEGKLYFDMMTRVHGISPGLEHF-----------------------------------S 635
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLMQ 243
++ + + G + A+ D+ +KP W A++S +G E +A +F+L
Sbjct: 636 CMVDLLGRAGHLTEAKDLIDKMPMKP-TAEVWGALLSACKIHGNDELAELAAKHVFEL-- 692
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P+S S++ + AG D + Q+ +M D
Sbjct: 693 ---DSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 725
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 216/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S + +SAC L GR VHG+ + E SD ++G AL+DMY + G + A +
Sbjct: 351 RPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACS 410
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ +++ +W +++ G + E A +F+ + + +W +MI+G+ Q
Sbjct: 411 VFKTME-IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMR----NSVSWTAMITGYVQGE 465
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ +LF++M++ G P++ + +VLS CAD+ A LG HG+V + +L+ D ++
Sbjct: 466 VPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVN 525
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY K G A + F E+ D W MISG +G+ A+E F M +
Sbjct: 526 NALMDMYAKSGALVLALKIFQ--EMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSG 583
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
PN + ++VLSAC HAG V + +F M G+KPK +H+GCMVDLLGR+G L EA
Sbjct: 584 XXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREA 643
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ELI +P +P ++ SLL AC H N L E + E+EP++ +++L NIY
Sbjct: 644 KELIEHMPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSA 703
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RWED + R+ + DR++ K PG S
Sbjct: 704 SRWEDALKARKAMRDRRVKKKPGCS 728
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D P +T ++V+S CA + G VHG K D + AL+DMY K G L A
Sbjct: 483 DWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLAL 542
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+FQE+ R++ +W TMI+G+ L+G+ A+E F ++ G P+ T S++S S
Sbjct: 543 KIFQEMP-KRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHA 601
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ E LF+KM Q G+ P ++ ++ L+ KE H+ + D +
Sbjct: 602 GLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM---PIKPDSVI 658
Query: 186 ATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+L+S + G + A E++PDD + + + Y +E A++ M+
Sbjct: 659 WRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDALKARKAMRD 718
Query: 245 EKVK 248
+VK
Sbjct: 719 RRVK 722
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 86/361 (23%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHG--LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
N+ TF ++ C SL L +Q+HG +TL + + L++ Y + G A
Sbjct: 253 NTQTFYFLLQKCGSLEKL---KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 309
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +I++W +I+ + + KA +F L H G +PD
Sbjct: 310 VFNHIQNP-DIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSF------------- 355
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
CV +SAC L G+ HG V R +L D +
Sbjct: 356 ----------------------CVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGN 393
Query: 188 ALISMY-------------------------------MKCGQPSWARRFFDQFEIKPDDP 216
ALI MY +KC ARR FD+ ++ +
Sbjct: 394 ALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMR--NS 451
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIF- 274
W AMI+GY + +E+F M+ E K P + VAVLS C G D +
Sbjct: 452 VSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHG 511
Query: 275 ----TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
T +D D + ++D+ +SG L A ++ +E+P+ V + +++
Sbjct: 512 YVNKTNLDLDVTVN------NALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLAL 565
Query: 331 H 331
H
Sbjct: 566 H 566
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 25/248 (10%)
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLG-MR-FEAFKLFEKMQSTGMVPSLKCVTS-- 153
MEL E L + + ++ +++ + G MR + ++ F K ST PS K S
Sbjct: 187 MELQELLDKGFIRANVSSLGALVLCVKKDGSMRLYINYREFNKSXSTERWPSXKKFASYT 246
Query: 154 -------------VLSACADLSALKLGKETHGHVIRADL--NKDESMATALISMYMKCGQ 198
+L C L LK + HG + L +K + +A L++ Y + G
Sbjct: 247 NRNAHMNTQTFYFLLQKCGSLEKLK---QIHGKAVTLGLLCSKRQHLACKLLNTYTQLGS 303
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
P A++ F+ I+ D W +IS Y + A IF + ++P+S V +
Sbjct: 304 PVDAQKVFNH--IQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAV 361
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
SACGH + +I M F L ++D+ RSG ++ A + + + V
Sbjct: 362 SACGHRKDLSNG-RIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDV 420
Query: 319 SVYHSLLG 326
S + SLL
Sbjct: 421 SSWTSLLN 428
>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
Length = 664
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 208/383 (54%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +SA + + G Q+HG +K + D + TAL+DMY KCG V
Sbjct: 154 PDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRV 213
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E ++ + N ++AG+ N + +A+ LF G + + +W S+++ Q G
Sbjct: 214 FDE-SSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGR 272
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQS G+ P+ + VL A A+++AL G+ H +R + D + +A
Sbjct: 273 DLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSA 332
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG+ AR F+ + + WNAMI GY +GE E+AV +F MQ K K
Sbjct: 333 LVDMYAKCGRVRDARMIFEAMPYR--NVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEK 390
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F VL AC AG ++ F M G+ P+ EH+ CMV LLGR+G+LD+A +
Sbjct: 391 PDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKLDDAYD 450
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I ++P EP ++ SLLG+C H N L E A L ++EPEN +V+LSNIYA
Sbjct: 451 IINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLEPENAGNYVLLSNIYASKKM 510
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V R+R M+ L K G S
Sbjct: 511 WDGVNRLRDMMKTVGLKKEKGCS 533
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 166/369 (44%), Gaps = 49/369 (13%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + ++L+ YL+ G A +V + R ++ W+ +IA +G +E A L E +
Sbjct: 54 DAFVASSLLHAYLRFGATADARSVLDGMP-HRTVVGWSALIAAHASHGDAEGAWGLLERM 112
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+G +P+ TWN ++SG ++ G +A +M G +P V+ LSA D+ +
Sbjct: 113 RSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDV 172
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+G++ HG+V++A D +ATALI MY KCG+ R FD E D A NA+++
Sbjct: 173 AVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFD--ESSHMDVASCNALVA 230
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G RN + A+ +F ++ N S+ ++++ C G +A+ +F M + G++
Sbjct: 231 GLSRNAQVSEALRLFREFVGRGIELNVVSWTSIVACCVQNGRDLEAVDLFREMQSE-GIE 289
Query: 285 PKQEHFGC-----------------------------------MVDLLGRSGRLDEAREL 309
P C +VD+ + GR+ +AR +
Sbjct: 290 PNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMI 349
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGE-EMAMKL-QEMEPENPTPFVILSNIYAGL-- 365
+P V +++++G H GE E A++L + M+ P ++ G
Sbjct: 350 FEAMPYRNVVSWNAMIGGYAMH-----GEAENAVRLFRSMQSSKEKPDLVTFTCVLGACS 404
Query: 366 -GRWEDVGR 373
W + GR
Sbjct: 405 QAGWTEEGR 413
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 5/158 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSVT V+ A A++ L GR H +L+ D +G+ALVDMY KCG + A
Sbjct: 289 EPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARM 348
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + RN+++WN MI G ++G +E A+ LF + KPD T+ ++ SQ G
Sbjct: 349 IFEAMP-YRNVVSWNAMIGGYAMHGEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAG 407
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL 161
E F +MQ G+ P ++ C+ ++L L
Sbjct: 408 WTEEGRSYFNEMQHKHGISPRMEHYACMVTLLGRAGKL 445
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 205/342 (59%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++ + A +F+ + RNI +WNTMI G NG +A +LF+ +
Sbjct: 298 NAMLAGYVQYKKMVIAGELFEAMP-CRNISSWNTMITGYGQNGGIAQARKLFDMMPQR-- 354
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +W ++ISG++Q G EA +F +M+ G + + LS CAD++AL+LGK+
Sbjct: 355 --DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQ 412
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG V++A + AL+ MY KCG A F+ E K D WN MI+GY R+
Sbjct: 413 VHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEK--DVVSWNTMIAGYARH 470
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G A+ +F+ M++ VKP+ + V VLSAC H+G +D+ + F MD D+ +KP +H
Sbjct: 471 GFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKH 530
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CM+DLLGR+GRL+EA L+R +P +P + + +LLGA H N++LGE+ A + +ME
Sbjct: 531 YTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKME 590
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P+N +V+LSN+YA GRW DVG++R + + + K+ G S
Sbjct: 591 PQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYS 632
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 2/150 (1%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ N TF +S CA + L+ G+QVHG +K ++ +G AL+ MY KCG A+
Sbjct: 387 ESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEAN 446
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+VF+ ++ +++++WNTMIAG +G +A+ LFE + G KPD T ++S S
Sbjct: 447 DVFEGIE-EKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHS 505
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVL 155
G+ + F M + + P+ K T ++
Sbjct: 506 GLIDRGTEYFYSMDRDYNVKPTSKHYTCMI 535
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 148/322 (45%), Gaps = 29/322 (9%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ YL+ A ++F ++ R++ +WN M+ G + N R +A +LF+ +
Sbjct: 81 NAMISGYLRNAKFSLARDLFDKMP-ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMP---- 135
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K D +WN+M+SG++Q G EA ++F KM + +L+A LK +
Sbjct: 136 KKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSIS----WNGLLAAYVHNGRLKEARR 191
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
+ + N + L+ Y+K AR+ FD+ ++ D WN MISGY +
Sbjct: 192 ----LFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR--DVISWNTMISGYAQV 245
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G+ A +F+ E + ++ A++S G VD+A + F D+ +K +
Sbjct: 246 GDLSQAKRLFN----ESPIRDVFTWTAMVSGYVQNGMVDEARKYF----DEMPVK-NEIS 296
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
+ M+ + ++ A EL +P +S +++++ + G A KL +M P
Sbjct: 297 YNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITG----YGQNGGIAQARKLFDMMP 352
Query: 350 ENP-TPFVILSNIYAGLGRWED 370
+ + + + YA G +E+
Sbjct: 353 QRDCVSWAAIISGYAQNGHYEE 374
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 113/278 (40%), Gaps = 68/278 (24%)
Query: 61 CLPCAHNVFQELKGSRN-------------ILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
CL C +N ++ + S N I+TWN I+ M NG + A+ +F +
Sbjct: 17 CL-CTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMP-- 73
Query: 108 GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
+ ++N+MISG+ + A LF+KM
Sbjct: 74 --RRSSVSYNAMISGYLRNAKFSLARDLFDKMPE-------------------------- 105
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+D +++ Y++ + A + FD K D WNAM+SGY
Sbjct: 106 -------------RDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKK--DVVSWNAMLSGYA 150
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+NG + A E+F+ M NS S+ +L+A H G + +A ++F + +
Sbjct: 151 QNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRLFESQSN-----WEL 201
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ C++ + L +AR+L +P V +++++
Sbjct: 202 ISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMI 239
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K D WN IS + RNG +SA+ +F+ M + +S S+ A++S G++
Sbjct: 40 KFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRR----SSVSYNAMIS-----GYLRN 90
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGA 327
A F++ D F P+++ F V L G R+ RL EA +L +P+ V ++++L
Sbjct: 91 AK--FSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSG 148
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
+ + +E +M N + L Y GR ++ R+
Sbjct: 149 ---YAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRL 192
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 214/377 (56%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C + + L GRQ+H L LK ++ +L+ +Y KCG L A VF +
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-E 434
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R+I++W +MI G KA E F+G+A + TWN+M+ + Q G + K+
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMATR----NAITWNAMLGAYIQHGAEEDGLKM 490
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M S + P ++ CAD+ A KLG + GH ++A L + S+A A I+MY
Sbjct: 491 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ S A++ FD K D WNAMI+GY ++G + A + FD M + KP+ S+
Sbjct: 551 KCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISY 608
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM G+ P EHF CMVDLLGR+G L EA++LI ++P
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N +L E A + E++ + +++L+ IY+ G+ +D +
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 374 IRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 729 VRKLMRDKGIKKNPGYS 745
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 154/333 (46%), Gaps = 36/333 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF V+ +C +L + Q+ GL K + D + TALVDM+++CG + A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ I N+M+AG + A+E FE +A D +WN MI+ SQ G
Sbjct: 196 FSQIE-RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGR 250
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA L +M G+ TS L+ACA L +L GK+ H VIR+ D +A+A
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG A+R F+ + + + W +I G + + +VE+F+ M+ E +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--------------MV 294
+ + ++S C F MD G +Q H C ++
Sbjct: 369 IDQFALATLISGC------------FNRMDLCLG---RQLHSLCLKSGHNRAIVVSNSLI 413
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
L + G L A + + E + + S++ A
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITA 446
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 159/369 (43%), Gaps = 48/369 (13%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ +C S L R +HG + + S + L+ YL CG L A + + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 70
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
++T N M+ G G A ELF+ + + D A+WN+++SG+ Q + + F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 138 KMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M +G +P+ V+ +C L +L + G + D D + TAL+ M+++C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 197 GQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
G +A R F Q E P + N+M++GY + + A+E F+ M + V S+
Sbjct: 187 GYVDFASRLFSQIE----RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDV----VSW 238
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+++A +G V +AL G +V++ + RLD
Sbjct: 239 NMMIAALSQSGRVREAL-------------------GLVVEMHRKGVRLDS--------- 270
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGR 373
+ Y S L AC + G+++ K+ P+ +P L +YA G +++ R
Sbjct: 271 ----TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 374 IRQMINDRQ 382
+ + DR
Sbjct: 327 VFNSLQDRN 335
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 175/417 (41%), Gaps = 77/417 (18%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ S ++ACA L L +G+Q+H ++ Q D + +AL+++Y KCG A VF
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L+ RN ++W +I G L +E F
Sbjct: 329 NSLQ-DRNSVSWTVLIGG---------------SLQYECFS------------------- 353
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
++ +LF +M++ M + +++S C + L LG++ H +++ N+ ++ +L
Sbjct: 354 -KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 190 ISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDPAF 218
IS+Y KCG SW AR FFD + +
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATR--NAIT 470
Query: 219 WNAMISGYGRNGEYESAVEIFD-LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAM+ Y ++G E ++++ ++ Q+ V P+ ++V + C G QI
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
GL + + + GR+ EA++L L V +++++ H +G
Sbjct: 531 VKA-GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQH---GMG 586
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ-MINDRQLTKLPGISAGI 393
++ A +M + P I + A L G +++ + +T++ GIS G+
Sbjct: 587 KQAAKTFDDMLSKGAKPDYI--SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 47/276 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT++++ CA + + G Q+ G T+K + + A + MY KCG + A +
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L G +++++WN MI G +G ++A + F+ + +G KPD ++ +++SG S G+
Sbjct: 562 FDLLNG-KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ M G+ P L+ +
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHF-----------------------------------S 645
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLMQ 243
++ + + G + A+ D+ +KP W A++S +G E +A +F+L
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDKMPMKP-TAEVWGALLSACKIHGNDELAELAAKHVFEL-- 702
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P+S S++ + AG D + Q+ +M D
Sbjct: 703 ---DSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 735
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 36/211 (17%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ + L +C AL + HG ++ L + L+ Y+ CG S ARR +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL-R 63
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-------------------- 248
+IK + N M++GY + G A E+FD M + V
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 249 ------------PNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGCMVD 295
PN+ +F V+ +CG G + A Q+ + DF P E +VD
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVD 181
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ R G +D A L ++ PT+ +S+L
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLA 212
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 211/385 (54%), Gaps = 41/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L G ++H +K D+ +G ALVDMY KCG + A
Sbjct: 481 EPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADK 540
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + R+E+ + +WN++ISGFS L
Sbjct: 541 I----------------------HDRTEQKTMV--------------SWNAIISGFSLLQ 564
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F +M G+ P +VL CA+L+ + LGK+ H +I+ +L D + +
Sbjct: 565 QSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICS 624
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L+ MY KCG ++ F++ P+ D WNAM+ GY +G E A+++F+ MQ
Sbjct: 625 TLVDMYSKCGNMQDSQLMFEK---APNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVN 681
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN A+FV+VL AC H G VDK L F +M ++GL P+ EH+ CMVD+LGRSGR+DEA
Sbjct: 682 VKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEA 741
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
L++++P E ++ +LL C H N ++ E+ L +++P++ + V+LSNIYA
Sbjct: 742 LNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADA 801
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W +V +R+M+ +L K PG S
Sbjct: 802 GMWGNVSEMRKMMRHNKLKKEPGCS 826
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 150/347 (43%), Gaps = 46/347 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ +T ++ACAS+ GRQVHGL +K S+ + A++DMY KC L A ++F
Sbjct: 382 DEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLF 441
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ + D +WN++I+ Q G
Sbjct: 442 DMME------------------------------------RRDAVSWNAIIAACEQNGNE 465
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E F M + M P SVL ACA AL G E H +I++ + D + AL
Sbjct: 466 EETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAAL 525
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A + D+ E K WNA+ISG+ + E A + F M + V P
Sbjct: 526 VDMYCKCGMIEKADKIHDRTEQKT--MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNP 583
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEAR 307
++ ++ AVL C + V QI + + + + + C +VD+ + G + +++
Sbjct: 584 DNFTYAAVLDTCANLATVGLGKQIHAQI---IKQELQSDVYICSTLVDMYSKCGNMQDSQ 640
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + P ++++L + + LGEE + M+ N P
Sbjct: 641 LMFEKAPNRDFVTWNAMLCG---YAHHGLGEEALKLFESMQLVNVKP 684
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+ AC +L G QVHGL +K D + G+AL+ MY KC L + +VF EL
Sbjct: 187 VLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELP--- 243
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+ + +W++MI+G Q E +LF
Sbjct: 244 ---------------------------------EKNWVSWSAMIAGCVQNDRNVEGLELF 270
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++MQ G+ S S+ +CA LSAL+LGKE H H +++ D + TA + MY KC
Sbjct: 271 KEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC 330
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G+ + A++ + +NA+I GY R+ A++ F L+ + + + +
Sbjct: 331 GRMADAQKVLS--SMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSG 388
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
L+AC + Q+ + + ++D+ G+ L EA +L +
Sbjct: 389 ALNACASIRGDLEGRQVHGLAVKSISMSNICVA-NAILDMYGKCKALAEASDLFDMMERR 447
Query: 317 TVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTPFVIL 358
+++++ AC + N + L +M MEP++ T +L
Sbjct: 448 DAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVL 491
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 151/322 (46%), Gaps = 26/322 (8%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF + C+ L G+Q H + + T + L+ MY+KC L A VF ++
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+++++N++I+G G + A + F +E + D +WNS+ISGF Q G ++
Sbjct: 111 Y-LRDVVSYNSIISGYASCGEMDIARKFF----YEMPERDVVSWNSVISGFLQNGECRKS 165
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+F +M G+ + VL AC L +G + HG V++ + D +AL+ M
Sbjct: 166 IDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGM 225
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + + F E+ + W+AMI+G +N +E+F MQ V + +
Sbjct: 226 YAKCKRLDDSLSVFS--ELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQS 283
Query: 253 SFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFG-------CMVDLLGRSGRL 303
+ ++ +C A + K L + + FG +D+ + GR+
Sbjct: 284 IYASLFRSCAALSALRLGKELHSHAL----------KSAFGSDIIVGTATLDMYAKCGRM 333
Query: 304 DEARELIRELPEPTVSVYHSLL 325
+A++++ +P+ ++ Y++++
Sbjct: 334 ADAQKVLSSMPKCSLQSYNAII 355
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 53/298 (17%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKM------------QSTGMVPS-LKCVTSVLSACAD 160
A S + ++L + A LF+K+ Q+ P+ ++ + + C+
Sbjct: 2 AVHTSQLWLLTRLFFSYHAIPLFKKIPPIPTNNFSTLAQNQTQPPAKIRTFSHIYQECSK 61
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMK------------------------- 195
++L GK+ H +I ++ L+ MY+K
Sbjct: 62 QNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSYNSI 121
Query: 196 ------CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
CG+ AR+FF +E+ D WN++ISG+ +NGE ++++F M + V
Sbjct: 122 ISGYASCGEMDIARKFF--YEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGF 179
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ AS VL ACG D +Q+ ++ FG ++ + + RLD++ +
Sbjct: 180 DRASLAVVLKACGALEECDMGVQVHGLV-VKFGFDCDVVTGSALLGMYAKCKRLDDSLSV 238
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
ELPE + +++ C + +D E +EM+ + +IYA L R
Sbjct: 239 FSELPEKNWVSWSAMIAGC---VQNDRNVEGLELFKEMQ---GVGVGVSQSIYASLFR 290
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 217/385 (56%), Gaps = 11/385 (2%)
Query: 9 PNSVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P VT++SV+SAC + G QVHG + D + ALVDMY +C + A
Sbjct: 142 PTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWK 201
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R++++W ++++G+ GR ++A +LF + D +W +MI G+ Q
Sbjct: 202 LFDGMQ-VRSVVSWTSLLSGLTRLGRVDEARDLFGRMPER----DTVSWTAMIDGYVQAA 256
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F +MQ + + + SV++ACA L AL++G+ ++ R + D +
Sbjct: 257 RFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGN 316
Query: 188 ALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG R D F ++ D W A+I G NG E A+E+F M
Sbjct: 317 ALIDMYSKCGS---IERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVS 373
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ +F+ VL+AC HAG VDK + F M + + + P H+GC++DL GR+G++ EA
Sbjct: 374 ETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEA 433
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I ++P P +++ +LL AC H NS++GE + +L +M+PEN T + +LSNIYA
Sbjct: 434 LDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKC 493
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R I ++ + K PG S
Sbjct: 494 NRWEDVRRLRHTIMEKGIKKEPGCS 518
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 31/240 (12%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L E + P WN++ISG ++ EA F M G P+ SVLSAC +
Sbjct: 100 LLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTG 159
Query: 164 -LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK---------- 212
+ LG + HG V+ + + D + AL+ MY +C A + FD +++
Sbjct: 160 DVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLS 219
Query: 213 ------------------PD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
P+ D W AMI GY + + A+E+F MQ V + +
Sbjct: 220 GLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCSNVSADEFT 279
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V+V++AC G ++ + M G+K ++D+ + G ++ A ++ +++
Sbjct: 280 MVSVITACAQLGALEMGEWVRVYMSRQ-GIKMDAFVGNALIDMYSKCGSIERALDVFKDM 338
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 1/140 (0%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+C + + T +SVI+ACA L L+ G V + + D +G AL+DMY KCG +
Sbjct: 269 QCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSI 328
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +VF+++ R+ TW +I G+ +NG E+A+E+F + PD T+ +++
Sbjct: 329 ERALDVFKDMH-HRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTA 387
Query: 123 FSQLGMRFEAFKLFEKMQST 142
+ G+ + + F M+ T
Sbjct: 388 CTHAGLVDKGREFFLSMRET 407
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 47/295 (15%)
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ R +A + +M + G +P +L A A S+ + H HV++ + ++ +
Sbjct: 21 VAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHV 80
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT+L++ Y G + AR + E D P WNA+ISG+ R + A F M +
Sbjct: 81 ATSLVTAYAAGGDGAAARALLSERE--RDTPVVWNALISGHNRCRRFGEACCSFVDMARA 138
Query: 246 KVKPNSASFVAVLSACGHA-GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL-------- 296
P ++V+VLSACG G V +Q+ + G+ P +VD+
Sbjct: 139 GAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADME 197
Query: 297 -----------------------LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
L R GR+DEAR+L +PE + +++ ++
Sbjct: 198 SAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDG---YVQ 254
Query: 334 SDLGEEMAMKLQEMEPENPTP--FVILSNIYA-------GLGRWEDVGRIRQMIN 379
+ E +EM+ N + F ++S I A +G W V RQ I
Sbjct: 255 AARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIK 309
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/400 (36%), Positives = 218/400 (54%), Gaps = 23/400 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH- 66
EPN TF SV+ ACA + L G+QVHGL LK D + T L+ MY+ CG + A+
Sbjct: 114 EPNQFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANV 173
Query: 67 -------------NVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
N+ ++ +G N++ N M+ G G + A ELF+ +A
Sbjct: 174 LFYRNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSV--- 230
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETH 171
+WN MISG++Q G EA ++F +M G ++P+ + SVL A + L L+LGK H
Sbjct: 231 -VSWNVMISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVH 289
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ + + D+ + +AL+ MY KCG A + F++ + ++ WNA+I G +G+
Sbjct: 290 LYAEKNKIRIDDVLGSALVDMYAKCGSIEKAIQVFER--LPQNNVITWNAVIGGLAMHGK 347
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
M++ + P+ +++A+LSAC HAG VD+ F M + GLKPK EH+G
Sbjct: 348 ANDIFNYLSRMEKCGISPSDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYG 407
Query: 292 CMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
CMVDLLGR+G L+EA ELI +P +P ++ +LLGA H N +G A L +M P
Sbjct: 408 CMVDLLGRAGYLEEAEELILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPH 467
Query: 351 NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ +V LSN+YA G W+ V +R M+ D + K PG S
Sbjct: 468 DSGAYVALSNMYASSGNWDGVAAVRLMMKDMDIRKDPGCS 507
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 78/176 (44%), Gaps = 24/176 (13%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG--QPSWARRFFDQFEIK 212
+ AC + LK + H +++ D ++AT ++ + +A FDQ
Sbjct: 22 IKACKSMRELK---QVHAFLVKTGQTHDNAIATEILRLSATSDFRDIGYALSVFDQL--- 75
Query: 213 PDDPAF-WNAMISGYGRNGE-YESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
P+ F WN +I + + A+ +F ++ + V+PN +F +VL AC + +
Sbjct: 76 PERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKACAVMARLAE 135
Query: 270 ALQI------FTMMDDDFGLKPKQEHF---GCMVD---LLGRSGR-LDEARELIRE 312
Q+ F ++DD+F + + G M D L R+ +D+ R L+R+
Sbjct: 136 GKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRNLVRD 191
>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 209/342 (61%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++ G L A +F E+ R+++ W MI G M G+ E A + FE + +
Sbjct: 134 NAMISGYVESGDLDLAKQLF-EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMKNL 192
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
TWN+MI+G+ + KLF++M +G P+ ++SVL C++LSALKLGK+
Sbjct: 193 ----VTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQ 248
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H + ++ ++ + + T+L+SMY KCG A + F + D WNAMISGY ++
Sbjct: 249 VHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLF--LVMPQKDVVTWNAMISGYAQH 306
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E A+ +FD M+ E +KP+ +FVAVLSAC HAG VD ++ F M D+G++ K +H
Sbjct: 307 GAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDH 366
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ C+VDLLGR G+L EA +LI+++P +P +++ +LLGAC H N +L E A L ++
Sbjct: 367 YTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLD 426
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
PE+ +V L+N+YA + RW+ V +R+ + D ++ K PG S
Sbjct: 427 PESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYS 468
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 49/344 (14%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM-LNGRSEKAMEL 100
K S+ + ++ +++ G L A VF+ + + +TWN+M+AG G+ + A +L
Sbjct: 1 KSSNVISSNRVITNHIRSGDLNSALRVFESMT-VKTTVTWNSMLAGYSNRRGKIKVARQL 59
Query: 101 FEGLAHEGF---------------------------KPDPATWNSMISGFSQLGMRFEAF 133
F+ + D A+WN+MISGFSQ GM +A
Sbjct: 60 FDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQAR 119
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+LF M V +++S + L L K+ + + TA+I+ +
Sbjct: 120 ELFLVMPVRNSVSW----NAMISGYVESGDLDLAKQ----LFEVAPVRSVVAWTAMITGF 171
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
MK G+ A ++F++ +K + WNAMI+GY N + E+ +++F M + +PN +S
Sbjct: 172 MKFGKIELAEKYFEEMPMK--NLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSS 229
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG---RSGRLDEARELI 310
+VL C + + Q+ ++ P + LL + G L++A +L
Sbjct: 230 LSSVLLGCSNLSALKLGKQVHQLICKS----PVSWNITAGTSLLSMYCKCGDLEDAWKLF 285
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+P+ V +++++ H GE+ +M E P
Sbjct: 286 LVMPQKDVVTWNAMISGYAQH---GAGEKALYLFDKMRDEGMKP 326
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 6/128 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + SV+ C++L L+ G+QVH L K + GT+L+ MY KCG L A
Sbjct: 224 RPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWK 283
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS-----G 122
+F + ++++TWN MI+G +G EKA+ LF+ + EG KPD T+ +++S G
Sbjct: 284 LFLVMP-QKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAG 342
Query: 123 FSQLGMRF 130
F LG+ +
Sbjct: 343 FVDLGIEY 350
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 223/419 (53%), Gaps = 38/419 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ SV+ AC L GR++H L LK +SD + +AL+DMY K G + A
Sbjct: 126 RPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMYAKSGEVEKARR 185
Query: 68 VFQELKGSR----------------------------------NILTWNTMIAGMMLNGR 93
VF+ + G N++TWNT++ G G
Sbjct: 186 VFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVTWNTLVTGFSQIGE 245
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
E ELF+ + G +PD +W S+ISGF Q EAF F +M + G P+ ++S
Sbjct: 246 EEMVRELFKEMEANGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISS 305
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L ACA + + GKE HGH + + KD + TAL+ MY KCG A+ F + +
Sbjct: 306 LLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILF--WRMSE 363
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-NSASFVAVLSACGHAGHVDKALQ 272
+ A WN+MI GY +G A+E+F M+ + K + +F A+L+AC HAG VD
Sbjct: 364 RNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAILTACAHAGLVDLGRS 423
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F +M +G+ P+ EH+ CMVD+ GR+G+L EA +LI+ +P +P + V+ +LLGAC H
Sbjct: 424 LFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGACRKH 483
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L EE A L E+EP + ++LS+IYA G W V ++++M+ R++ K PG S
Sbjct: 484 GEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRKMKKFPGCS 542
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 43/331 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+I +I C L FGR +H + T + Y CG + A +F ++
Sbjct: 31 YIELIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIP 90
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
+ +P W +I +S+ G EA
Sbjct: 91 ------------------------------------RTNPRRWIVLIGAYSRCGYYPEAL 114
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+F ++Q G+ PS + SVL AC LS G++ H +++ L D + +ALI MY
Sbjct: 115 SVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALIDMY 174
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
K G+ ARR F+ K D NAM+SGY +G E A+ + + MQ +KPN +
Sbjct: 175 AKSGEVEKARRVFESMAGK--DLVALNAMVSGYAHHGLAEEALNLVEEMQVLGIKPNLVT 232
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+ +++ G + ++F M+ + G++P + ++ ++ R +EA + R +
Sbjct: 233 WNTLVTGFSQIGEEEMVRELFKEMEAN-GIEPDVVSWTSVISGFVQNFRNEEAFDTFRRM 291
Query: 314 P----EPTVSVYHSLLGACWCHLNSDLGEEM 340
PT + SLL AC N G+E+
Sbjct: 292 LNAGFHPTSATISSLLPACASVGNGRCGKEI 322
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 241/421 (57%), Gaps = 44/421 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC +L+ GR++H K+ Q + + +L+ MY + G A +
Sbjct: 115 RPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 171
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK----------------- 110
+F ++ R++ +WN MI+G++ NG + +A+++ + + EG K
Sbjct: 172 LFDDMP-FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMY 230
Query: 111 ------------------PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCV 151
D +WN++I+G++Q G+ EA ++++ M+ ++P+
Sbjct: 231 AKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTW 290
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
S+L A A + AL+ G + HG VI+ +L+ D +AT LI +Y KCG+ A F +++
Sbjct: 291 VSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF--YQV 348
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WNA+IS +G +G E +++F M E VKP+ +FV++LSAC H+G V++
Sbjct: 349 PQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGK 408
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWC 330
F +M + +G+KP +H+GCMVDLLGR+G L+ A + I+++P +P S++ +LLGAC
Sbjct: 409 WCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRI 467
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
H N +LG+ + +L E++ +N +V+LSNIYA +G+WE V ++R + +R L K PG S
Sbjct: 468 HGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 527
Query: 391 A 391
Sbjct: 528 T 528
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 11/252 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC PN T++S++ A A + LQ G ++HG +K D + T L+D+Y KCG
Sbjct: 277 MEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG 336
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A ++F ++ ++ TWN +I+ ++G +EK ++LF + EG KPD T+ S++
Sbjct: 337 RLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 395
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA 177
S S G E F MQ G+ PSLK C+ +L L + +
Sbjct: 396 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEM------AYDFIKDM 449
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAV 236
L D S+ AL+ G + D+ FE+ + ++ + + Y G++E
Sbjct: 450 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 509
Query: 237 EIFDLMQQEKVK 248
++ L ++ +K
Sbjct: 510 KVRSLARERGLK 521
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 153/360 (42%), Gaps = 41/360 (11%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
F + +H L + K I T LV++Y G + + F ++ +++ WN+MI+
Sbjct: 34 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP-QKDVYAWNSMISAY 92
Query: 89 MLNGRSEKAMELF-EGLAHEGFKPDPAT---------------------------WN--- 117
+ NG +A+ F + L +PD T WN
Sbjct: 93 VHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFV 152
Query: 118 --SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
S+I +S+ G A LF+ M M ++ ++ AL + E I
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 212
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + S+ + MY K G A + F+ +K D WN +I+GY +NG A
Sbjct: 213 KMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVK--DVISWNTLITGYAQNGLASEA 270
Query: 236 VEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+E++ +M++ +++ PN ++V++L A H G + + ++I + L C++
Sbjct: 271 IEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLI 329
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D+ G+ GRL +A L ++P+ + +++++ CH E+ EM E P
Sbjct: 330 DVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS---CHGIHGHAEKTLKLFGEMLDEGVKP 386
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 216/384 (56%), Gaps = 9/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACA+L L+ G ++H +LK+ ++ + ++L+DMY KC A
Sbjct: 378 RPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQT 437
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +NI+ WN++ +G NG+ +AM LF+ + A+WN++ISG++Q
Sbjct: 438 IFDTLP-EKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNL----ASWNTIISGYAQNR 492
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + F M ++G VP +SVL ACA+L +L GK H I+ + + + T
Sbjct: 493 QFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGT 552
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G ++R F Q + D W AMI G NG E ++ + + M +
Sbjct: 553 ALSDMYAKSGDLQSSKRMFYQMPERND--VTWTAMIQGLAENGFAEESILLLEDMMATGM 610
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+A+L AC H G V++A+ F M +G+ PK++H+ CMVD+L R+GRL EA
Sbjct: 611 TPNEHTFLALLFACSHGGLVEQAIHYFEKM-QAWGISPKEKHYTCMVDVLARAGRLIEAE 669
Query: 308 ELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ + P + + + +LL AC + N ++GE A +L E+ +N +V+LSN+YA G
Sbjct: 670 ALLMKTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCG 729
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D RIR ++ L K G S
Sbjct: 730 RWKDAARIRVLMKGTTLKKDGGCS 753
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 49/382 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
PN +TF+ +I AC + G +K +S + +L+ +YL+ G A
Sbjct: 245 RPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAAR 304
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +++++W ++ +G + A + + + + +W ++I+ Q
Sbjct: 305 KVFDEMD-VKDVVSWTALLDVYSESGDLDGARRVLDAMPER----NEVSWGTLIARHEQR 359
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA KL+ +M + G P++ C +SVLSACA L L+ G H ++ + + ++
Sbjct: 360 GNAAEAVKLYSQMLADGCRPNISCFSSVLSACATLEDLRGGARIHARSLKMGSSTNVFVS 419
Query: 187 TALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPA 217
++LI MY KC + A+ FD ++ + A
Sbjct: 420 SSLIDMYCKCKKCRDAQTIFDTLPEKNIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLA 479
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKALQ 272
WN +ISGY +N ++ A+ F+ M P +F +VL AC + G + A
Sbjct: 480 SWNTIISGYAQNRQFVDALRSFNAMLASGQVPGEITFSSVLLACANLCSLVTGKMAHAKT 539
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
I M++ + + D+ +SG L ++ + ++PE + +++
Sbjct: 540 IKLGMEESIFIGT------ALSDMYAKSGDLQSSKRMFYQMPERNDVTWTAMIQGL---A 590
Query: 333 NSDLGEEMAMKLQEMEPENPTP 354
+ EE + L++M TP
Sbjct: 591 ENGFAEESILLLEDMMATGMTP 612
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 125/257 (48%), Gaps = 16/257 (6%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + RN++++ TM+ +M GR +A+EL+E +
Sbjct: 157 MVHEHVKAGDIASARGLFDGMP-ERNVVSYTTMVDALMKRGRVAEAVELYE----QCPSG 211
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + + ISGF + + A +F KM S G+ P+ ++ AC L
Sbjct: 212 SVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAMSIV 271
Query: 172 GHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G I+++ + + +LI++Y++ G + AR+ FD+ ++K D W A++ Y +G
Sbjct: 272 GSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVK--DVVSWTALLDVYSESG 329
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ + A + D M + N S+ +++ G+ +A+++++ M D G +P +
Sbjct: 330 DLDGARRVLDAMPER----NEVSWGTLIARHEQRGNAAEAVKLYSQMLAD-GCRP---NI 381
Query: 291 GCMVDLLGRSGRLDEAR 307
C +L L++ R
Sbjct: 382 SCFSSVLSACATLEDLR 398
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G+ + A ++Q AF+ A ISG+ RN + +A+ +F M
Sbjct: 186 TTMVDALMKRGRVAEAVELYEQ--CPSGSVAFFTATISGFVRNELHHNALGVFRKMVSCG 243
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +FV ++ AC AG A+ I + E ++ L R G A
Sbjct: 244 VRPNGITFVCMIKACVGAGEFGLAMSIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAA 303
Query: 307 RELIRELPEPTVSVYHSLL 325
R++ E+ V + +LL
Sbjct: 304 RKVFDEMDVKDVVSWTALL 322
>gi|449484291|ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14050, mitochondrial-like [Cucumis sativus]
Length = 611
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 225/387 (58%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F ++ AC+SL YL+ G+QVH + D ++ ++L+DMY KCG A
Sbjct: 102 QPDHFVFACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSSLIDMYTKCGQPDEARA 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEGFKPDPATWNSMISGFSQL 126
VF + +N ++W +MI+G +GR +AM+LF + F +W ++ISG Q
Sbjct: 162 VFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF-----SWTALISGLIQS 215
Query: 127 GMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +F LF +M+ G+ + ++SV+ CA+L+ L+LGK+ HG VI +
Sbjct: 216 GHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFI 275
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ AL+ MY KC A+ F + + D W ++I G ++G+ E A+ ++D M
Sbjct: 276 SNALVDMYAKCSDILAAKDIF--YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLS 333
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++KPN +FV +L AC HAG V + ++F M D+ + P +H+ C++DLL RSG LDE
Sbjct: 334 RIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDE 393
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A L+ ++P +P + SLL AC H N ++G +A ++ +++PE+P+ +++LSN+YAG
Sbjct: 394 AENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAG 453
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V ++R++++ ++ K PG S+
Sbjct: 454 AEMWGSVSKVRKLMSSMEVRKEPGYSS 480
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 43/269 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F+ + CA ++H +K +++ L+D+Y KCG +P A +F
Sbjct: 2 NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQLGM 128
E+ +R+ ++W +++ + + + + H+G +PD +
Sbjct: 62 DEMP-NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVF------------ 108
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++ AC+ L L+LGK+ H + + DE + ++
Sbjct: 109 -----------------------ACIVRACSSLGYLRLGKQVHARFMLSXFCDDEVVKSS 145
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQP AR FD K + W +MISGY R+G E DL Q V+
Sbjct: 146 LIDMYTKCGQPDEARAVFDSILFK--NSVSWTSMISGYARSGR---KCEAMDLFLQAPVR 200
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMM 277
N S+ A++S +GH + +F M
Sbjct: 201 -NLFSWTALISGLIQSGHGIYSFSLFNEM 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L CA + E H +I+A +K ++ L+ +Y KCG A + FD E+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFD--EMPNR 67
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D W ++++ + + + + + M + ++P+ F ++ AC G++ Q+
Sbjct: 68 DHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQV 127
Query: 274 -----FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ DD +K ++D+ + G+ DEAR +
Sbjct: 128 HARFMLSXFCDDEVVKSS------LIDMYTKCGQPDEARAV 162
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 211/386 (54%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +SV+ AC L L+ GR V G ++ ++ IG+AL+ MY KCG
Sbjct: 215 EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCG------- 267
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+L +R I F+G+A D TWN++ISG++Q G
Sbjct: 268 ---DLGSARRI----------------------FDGMAAR----DVITWNAVISGYAQNG 298
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF M+ + + +T+VLSACA + AL LGK+ + + D +AT
Sbjct: 299 MADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVAT 358
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK- 246
ALI MY KCG + A+R F E+ + A WNAMIS +G+ + A+ +F M E
Sbjct: 359 ALIDMYAKCGSLASAQRVFK--EMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGG 416
Query: 247 -VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +FV +LSAC HAG V++ ++F MM FGL PK EH+ CMVDLL R+G L E
Sbjct: 417 GARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYE 476
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A +LI ++PE P +LLGAC N D+GE + + E++P N ++I S IYA
Sbjct: 477 AWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILEVDPSNSGNYIISSKIYAN 536
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L WED R+R ++ + +TK PG S
Sbjct: 537 LNMWEDSARMRLLMRQKGITKTPGCS 562
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 48/317 (15%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
+CA+L L R H L K+ SD +L+ MY +CG + A VF E+ R+++
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIP-RRDLV 183
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK 138
+WN+MIAG G + +A+E+F + +GF+PD +
Sbjct: 184 SWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMS----------------------- 220
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
+ SVL AC +L L+LG+ G V+ + + + +ALISMY KCG
Sbjct: 221 ------------LVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGD 268
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
ARR FD + D WNA+ISGY +NG + A+ +F M+++ V N + AVL
Sbjct: 269 LGSARRIFDGMAAR--DVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVL 326
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIRELP 314
SAC G +D QI D++ + +H ++D+ + G L A+ + +E+P
Sbjct: 327 SACATIGALDLGKQI-----DEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP 381
Query: 315 EPTVSVYHSLLGACWCH 331
+ + +++++ A H
Sbjct: 382 QKNEASWNAMISALASH 398
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 99/168 (58%), Gaps = 10/168 (5%)
Query: 1 MKE-CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
MKE C+++ N +T +V+SACA++ L G+Q+ + Q D + TAL+DMY KC
Sbjct: 310 MKEDCVTE--NKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKC 367
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE--GFKPDPATWN 117
G L A VF+E+ +N +WN MI+ + +G++++A+ LF+ ++ E G +P+ T+
Sbjct: 368 GSLASAQRVFKEMP-QKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFV 426
Query: 118 SMISGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL 161
++S G+ E ++LF+ M + G+VP ++ C+ +L+ L
Sbjct: 427 GLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHL 474
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 9/226 (3%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+H P+ +N MI + + A LF +M S + P+ +CA+L+
Sbjct: 71 FSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLA 130
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L + H V + L+ D +LI+MY +CG+ ++AR+ FD EI D WN+M
Sbjct: 131 VLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFD--EIPRRDLVSWNSM 188
Query: 223 ISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDD 279
I+GY + G AVE+F M +++ +P+ S V+VL ACG G ++ + ++ F +
Sbjct: 189 IAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVV--- 245
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ G+ ++ + + G L AR + + V +++++
Sbjct: 246 ERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVI 291
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 220/386 (56%), Gaps = 9/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T +SV+SACA + L+FGR + ++ A++DMY+KCGC+ A +
Sbjct: 271 KPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKD 330
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++I++W TM+ G G ++A +F+ + H+ A WN++IS + Q G
Sbjct: 331 LFNKM-SEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKW----TAAWNALISAYEQNG 385
Query: 128 MRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
A LF +MQ S P + L A A L A+ G H ++ + D+N + +A
Sbjct: 386 KPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLA 445
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+L+ MY KCG + A F E K D W+AMI G+ ++A+++F M +
Sbjct: 446 TSLLDMYAKCGNLNKAMEVFHAVERK--DVYVWSAMIGALAMYGQGKAALDLFSSMLEAY 503
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KPN+ +F +L AC HAG V++ Q+F M+ +G+ P+ +H+ C+VD+ GR+G L++A
Sbjct: 504 IKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKA 563
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
I ++P PT +V+ +LLGAC H N +L E L E+EP N FV+LSNIYA
Sbjct: 564 ASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKA 623
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G WE V +R+++ D + K P S+
Sbjct: 624 GDWEKVSNLRKLMRDSDVKKEPWCSS 649
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 146/357 (40%), Gaps = 77/357 (21%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S+ PN TF + A + L L G +HG+ +K SD I +L++ Y G A
Sbjct: 168 SEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLA 227
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H VF + G +++++WN MI L G +KA+ LF+ + + KP+ T
Sbjct: 228 HRVFTNMPG-KDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVIT---------- 276
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ SVLSACA L+ G+ ++ + +
Sbjct: 277 -------------------------MVSVLSACAKKIDLEFGRWICSYIENNGFTEHLIL 311
Query: 186 ATALISMYMKCGQPSWARRFFDQ----------------------------FEIKPDD-P 216
A++ MY+KCG + A+ F++ F+ P
Sbjct: 312 NNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWT 371
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQIFT 275
A WNA+IS Y +NG+ A+ +F MQ K KP+ + + L A G +D I
Sbjct: 372 AAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHV 431
Query: 276 MMDDDFGLKPKQEHFGC-----MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+K + C ++D+ + G L++A E+ + V V+ +++GA
Sbjct: 432 Y------IKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGA 482
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 43/321 (13%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL--KCGCLPC 64
+E S + I C + + L +Q+H L+ + D + L+ Y C CL
Sbjct: 68 NEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIY 124
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A NVF ++ N+ WNT+I G + ++ +F + H S
Sbjct: 125 AKNVFNQIP-QPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSC---------------S 168
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +F LF+ A + L L LG HG VI+A L+ D
Sbjct: 169 EFPNKFTFPFLFK-------------------AASRLKVLHLGSVLHGMVIKASLSSDLF 209
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI+ Y G P A R F K D WNAMI+ + G + A+ +F M+
Sbjct: 210 ILNSLINFYGSSGAPDLAHRVFTNMPGK--DVVSWNAMINAFALGGLPDKALLLFQEMEM 267
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ VKPN + V+VLSAC ++ I + ++++ G M+D+ + G ++
Sbjct: 268 KDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENN-GFTEHLILNNAMLDMYVKCGCIN 326
Query: 305 EARELIRELPEPTVSVYHSLL 325
+A++L ++ E + + ++L
Sbjct: 327 DAKDLFNKMSEKDIVSWTTML 347
>gi|224054634|ref|XP_002298341.1| predicted protein [Populus trichocarpa]
gi|222845599|gb|EEE83146.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/417 (33%), Positives = 227/417 (54%), Gaps = 38/417 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N SV+ C + +Q GR +H + LK +SD + ++L+DMY KCG + A VF
Sbjct: 9 NKFVIPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISSLIDMYSKCGEVEKARRVF 68
Query: 70 ----------------------------------QELKGSRNILTWNTMIAGMMLNGRSE 95
++L N++TWN++I+G G
Sbjct: 69 DRMVEKDLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLISGFAQKGDDA 128
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
++FE + G +PD +W S+ISG Q AF F++M G +P+ +++VL
Sbjct: 129 MVSKMFELMISNGVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGFLPTSATISTVL 188
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
+ACA ++ ++ G+E HG+ + + D + +AL+ MY KCG S A F + + +
Sbjct: 189 AACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVLF--YMMPERN 246
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHVDKALQIF 274
WN+MI GY +G + A+E+FD M++ E K + +F AVL+AC HAG V+ +F
Sbjct: 247 TVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAGMVEHGQSLF 306
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M + + P+ EH+ CMVDLLGR+G L+EA ++I+++P +P + V+ +LLGAC H +
Sbjct: 307 LLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDLFVWGALLGACRNHGD 366
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E A L E+EPEN +++SN+YA G WE+V R ++M+ ++L PG S
Sbjct: 367 IGLAEVAARHLAELEPENAGNNMLMSNLYADAGSWENVSRSKKMMKRKRLKNFPGCS 423
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 90/159 (56%), Gaps = 6/159 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S T +V++ACA++ ++ GR++HG + I + D + +ALVDMY KCG + A +
Sbjct: 179 PTSATISTVLAACATMANVRRGREIHGYAVVIRVEDDIYVRSALVDMYAKCGFISEASVL 238
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQLG 127
F + RN +TWN+MI G +G ++A+ELF+ + EG K D T+ ++++ S G
Sbjct: 239 FYMMP-ERNTVTWNSMIFGYANHGYCDEAIELFDQMEKSEGNKLDHLTFTAVLTACSHAG 297
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS 162
M LF MQ +VP L+ C+ +L +L+
Sbjct: 298 MVEHGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLN 336
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
MQ G+ + + SVL C + ++ G+ H +++ + D + ++LI MY KCG+
Sbjct: 1 MQKQGLGANKFVIPSVLKCCGHVYDVQTGRILHSVILKYSIESDVYVISSLIDMYSKCGE 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
ARR FD+ K D NAM+SGYG++G + + D M++ +KPN ++ +++
Sbjct: 61 VEKARRVFDRMVEK--DLVALNAMLSGYGQHGFAKEGFALMDKMEKLGIKPNVITWNSLI 118
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE--- 315
S G ++F +M + G++P + ++ L ++ R + A + +++
Sbjct: 119 SGFAQKGDDAMVSKMFELMISN-GVEPDVISWTSVISGLVQNFRNEAAFDAFKQMLGRGF 177
Query: 316 -PTVSVYHSLLGACWCHLNSDLGEEM 340
PT + ++L AC N G E+
Sbjct: 178 LPTSATISTVLAACATMANVRRGREI 203
>gi|356518777|ref|XP_003528054.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 737
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 224/387 (57%), Gaps = 18/387 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N V++ S+IS LQ+ RQVHG+ + + + + ++ AL+D Y KCG + +VF
Sbjct: 106 NVVSYNSLISG-----NLQWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVF 160
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ RN+++W +M+ R ++A +F+ + + + +W ++++GF + G
Sbjct: 161 CYMP-ERNVVSWTSMVVAYTRACRLDEACRVFKDMPVK----NTVSWTALLTGFVRNGGC 215
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD---ESMA 186
EAF +F++M G+ PS SV+ ACA + + GK+ HG +IR D + + +
Sbjct: 216 DEAFDVFKQMLEEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVC 275
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG A F+ ++ D WN +I+G+ +NG E ++ +F M + K
Sbjct: 276 NALIDMYAKCGDMKSAENLFEMAPMR--DVVTWNTLITGFAQNGHGEESLAVFRRMIEAK 333
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +F+ VLS C HAG ++ LQ+ +M+ +G+KPK EH+ ++DLLGR RL EA
Sbjct: 334 VEPNHVTFLGVLSGCNHAGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEA 393
Query: 307 RELIRELPEPT---VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
LI ++P+ ++V+ ++LGAC H N DL + A KL E+EPEN +V+L+NIYA
Sbjct: 394 MSLIEKVPDGIKNHIAVWGAVLGACRVHGNLDLARKAAEKLFELEPENTGRYVMLANIYA 453
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+W RIR ++ +R L K P S
Sbjct: 454 ASGKWGGAKRIRNVMKERCLEKEPACS 480
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 156/367 (42%), Gaps = 26/367 (7%)
Query: 9 PNSV-----TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
PN V + +IS C + ++ VHG +K D + L+D Y KCGC
Sbjct: 3 PNDVISSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGCEE 62
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH F +L ++ +WNT+I+ G ++A LF+ + + ++NS+ISG
Sbjct: 63 SAHKTFGDLP-NKTTRSWNTLISFYSKTGFFDEAHNLFDKMPQR----NVVSYNSLISGN 117
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q + + GM ++ +++ A L ++ ++
Sbjct: 118 LQWLRQVHGVAVI-----VGMEWNVILNNALIDAYGKCGEPNLSFSVFCYMPERNVVSWT 172
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
SM A Y + + A R F +K + W A+++G+ RNG + A ++F M
Sbjct: 173 SMVVA----YTRACRLDEACRVFKDMPVK--NTVSWTALLTGFVRNGGCDEAFDVFKQML 226
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIF--TMMDDDFGLKPKQEHFGCMVDLLGRSG 301
+E V+P++ +FV+V+ AC + + Q+ + D G ++D+ + G
Sbjct: 227 EEGVRPSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCG 286
Query: 302 RLDEARELIRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
+ A L P V +++L+ A H L M ++EP + T +LS
Sbjct: 287 DMKSAENLFEMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLS 346
Query: 360 NI-YAGL 365
+AGL
Sbjct: 347 GCNHAGL 353
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 124/249 (49%), Gaps = 23/249 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS---DTMIGTALVDMYLKCGCLPCA 65
P++ TF+SVI ACA + G+QVHG ++ +K + + AL+DMY KCG + A
Sbjct: 232 PSAPTFVSVIDACAQEALIGRGKQVHGQIIRGDKSGNLFNVYVCNALIDMYAKCGDMKSA 291
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F E+ R+++TWNT+I G NG E+++ +F + +P+ T+ ++SG +
Sbjct: 292 ENLF-EMAPMRDVVTWNTLITGFAQNGHGEESLAVFRRMIEAKVEPNHVTFLGVLSGCNH 350
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSAL--------KLGKETHGHVIR 176
G+ E +L + M+ G+ P + ++ + L K+ H+
Sbjct: 351 AGLDNEGLQLVDLMERQYGVKPKAEHYALLIDLLGRRNRLMEAMSLIEKVPDGIKNHI-- 408
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESA 235
++ A++ G AR+ ++ FE++P++ + + + Y +G++ A
Sbjct: 409 -------AVWGAVLGACRVHGNLDLARKAAEKLFELEPENTGRYVMLANIYAASGKWGGA 461
Query: 236 VEIFDLMQQ 244
I ++M++
Sbjct: 462 KRIRNVMKE 470
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 37/215 (17%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M ++ S++ + ++S C +KL HGH+I+ L D +A LI Y KCG
Sbjct: 1 MLPNDVISSVEKYSFLISKCITARRVKLANAVHGHLIKTALFFDAFLANGLIDAYSKCGC 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV--- 255
A + F K WN +IS Y + G ++ A +FD M Q V ++
Sbjct: 61 EESAHKTFGDLPNKTTRS--WNTLISFYSKTGFFDEAHNLFDKMPQRNVVSYNSLISGNL 118
Query: 256 -----------------------AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HF 290
A++ A G G + + +F M P++ +
Sbjct: 119 QWLRQVHGVAVIVGMEWNVILNNALIDAYGKCGEPNLSFSVFCYM-------PERNVVSW 171
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
MV R+ RLDEA + +++P + +LL
Sbjct: 172 TSMVVAYTRACRLDEACRVFKDMPVKNTVSWTALL 206
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 210/394 (53%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E ++ TA++ Y + G + A +F E+ RN ++W M
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF-EVMPERNEVSWTAM 242
Query: 85 IAGMMLNGRSEKAMELFEGLAHE----------GF-----------------KPDPATWN 117
+ G + G E A ELF + GF + D TW+
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI + Q EA F +M G+ P+ V S+L+ CA L+ L G+E H ++R
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +ALI+MY+KCG A+R F FE P D WN+MI+GY ++G E A+
Sbjct: 363 SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE--PKDIVMWNSMITGYAQHGLGEQALG 420
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IF M+ + P+ +++ L+AC + G V + +IF M + ++P EH+ CMVDLL
Sbjct: 421 IFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL 480
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GRSG ++EA +LI+ +P EP ++ +L+GAC H N+++ E A KL E+EP N P+V
Sbjct: 481 GRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYV 540
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS+IY +GRWED ++R+ I+ R L K PG S
Sbjct: 541 LLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 32/316 (10%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
AL+ Y + A +F+ + SR++ ++N +I+G+ L R + + LA F
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMP-SRDLASYNALISGLSL--RRQTLPDAAAALASIPF 108
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P ++ S++ G+ + G+ +A +LF++M V + +L A A +L E
Sbjct: 109 PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDE 168
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
++D TA++S Y + G+ + AR FD E+ + W AMISGY +N
Sbjct: 169 MP--------DRDVVAWTAMLSGYCQAGRITEARALFD--EMPKRNVVSWTAMISGYAQN 218
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
GE A ++F++M + N S+ A+L AGHV+ A ++F M P+
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-------PEHPV 267
Query: 290 FGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA----MK 343
C M+ G+ G +D A+ + ++ E + +++ A N L E ++ M
Sbjct: 268 AACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKA--YEQNEFLMEALSTFREML 325
Query: 344 LQEMEPENPTPFVILS 359
+ + P P+ IL+
Sbjct: 326 WRGVRPNYPSVISILT 341
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + IS+++ CA+L L +GR+VH L+ D +AL+ MY+KCG L A
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKR 389
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++I+ WN+MI G +G E+A+ +F + G PD T+ ++ S G
Sbjct: 390 VFHTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 128 MRFEAFKLFEKM 139
E ++F M
Sbjct: 449 KVKEGREIFNSM 460
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 220/385 (57%), Gaps = 11/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACA+L L+ G ++H LK+ ++ + ++L+DMY KC A
Sbjct: 376 RPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQR 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L +N + WN++I+G NG+ +A EGL ++ + +WN+MISG+++
Sbjct: 436 VFNSLP-EKNTVCWNSLISGYSWNGKMVEA----EGLFNKMPARNSVSWNTMISGYAE-N 489
Query: 128 MRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
RF +A F M ++G +P ++SVL ACA+L +L++G+ H +++ + + M
Sbjct: 490 RRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMG 549
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL MY K G +RR F +++ + W AM+ G NG E ++ +F+ M +
Sbjct: 550 TALCDMYAKSGDLDSSRRVF--YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENG 607
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ PN +F+A+L AC H G V++A+ F M G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 IAPNEHTFLAILFACSHCGLVEQAIHYFETMQAH-GIPPKSKHYTCMVDVLARAGCLPEA 666
Query: 307 RELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
EL+ ++ E S + SLL AC + N ++GE A KL E+E +N +V+LSN+YA
Sbjct: 667 EELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASC 726
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+W+D R ++ L K G S
Sbjct: 727 GKWKDAAETRILMQGASLKKDAGCS 751
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 150/340 (44%), Gaps = 36/340 (10%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPC 64
S PN VT I VI AC V GL +K ++ + +L+ +YL+ G
Sbjct: 241 SVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAA 300
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF +++ R++++W ++ G + A + + + + +W ++I+
Sbjct: 301 ARRVFDDME-VRDVVSWTALLDVYADLGDLDGARRVLDAMPAR----NEVSWGTLIARHE 355
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA KL+ +M + G P++ C +SVLSACA L L+ G H + ++ + +
Sbjct: 356 QKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLF 415
Query: 185 MATALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDD 215
++++LI MY KC Q ++A+R F+ ++ +
Sbjct: 416 VSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARN 475
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN MISGY N + A+ F M P + +VL AC + ++ +
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ G++ + D+ +SG LD +R + ++PE
Sbjct: 536 EI-VKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPE 574
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 121/257 (47%), Gaps = 16/257 (6%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + ++++++ TM+ +M G A+EL+E
Sbjct: 155 MVSEHVKAGDIASARRLFYGMP-EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSV-- 211
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + +MISGF + + +AF +F KM + + P++ + V+ AC L
Sbjct: 212 --AFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVV 269
Query: 172 GHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G ++ +L K + +LI++Y++ G + ARR FD E++ D W A++ Y G
Sbjct: 270 GLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVR--DVVSWTALLDVYADLG 327
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ + A + D M N S+ +++ G +AL++++ M D G +P +
Sbjct: 328 DLDGARRVLDAMPAR----NEVSWGTLIARHEQKGDTAEALKLYSQMLAD-GCRP---NI 379
Query: 291 GCMVDLLGRSGRLDEAR 307
C +L L + R
Sbjct: 380 SCFSSVLSACATLQDLR 396
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G A +++ + AF+ AMISG+ RN ++ A +F M
Sbjct: 184 TTMVDALMKRGSVRDAVELYERCPLH--SVAFFTAMISGFVRNELHKDAFTVFRKMLTCS 241
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN + + V+ AC AG D A+ + + + E ++ L R G A
Sbjct: 242 VRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAA 301
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
R + ++ V + +LL + +DLG+
Sbjct: 302 RRVFDDMEVRDVVSWTALL-----DVYADLGD 328
>gi|357133649|ref|XP_003568436.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Brachypodium distachyon]
Length = 610
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 213/385 (55%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ S+ SA A L L G+Q+HG + SD ++ ++L+DMY KCG A
Sbjct: 102 RPDHFVLASIASATARLRSLCLGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARK 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++N + W +I+G +LNGRS++A+ELF + W ++ISGF + G
Sbjct: 162 VFDSIV-AKNSVMWTALISGYVLNGRSDEALELFRSMPGRTL----FAWTALISGFVRSG 216
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
A KLF M+ G+ + ++S + ADL+A LG++ H +R + +
Sbjct: 217 ESVSAVKLFVDMRRDGVSIDDAFVLSSAIGGAADLAAHVLGRQLHSLTMRLGFSSSMIVG 276
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A++ MY KC AR F+ EI D W M+ G ++G E A ++D M
Sbjct: 277 NAVVDMYSKCSDIHSAREVFE--EITGRDIISWTTMLVGEAQHGRAEEAFSLYDRMVLAG 334
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +FV ++ AC HAG V K Q+F M ++G+ P+ +H+ C +DLL RSG L EA
Sbjct: 335 VKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKGEYGINPRLQHYTCYLDLLSRSGHLAEA 394
Query: 307 RELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI +P P + + SLL AC + N+++ +A L E+ P+ P+ +V+LSN+YA
Sbjct: 395 EELITTMPYVPDEATWASLLSACKKYNNAEMSIRVADNLLELRPKYPSTYVLLSNVYAVN 454
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+W+ V +R+++ D ++ K PG S
Sbjct: 455 GKWDSVDTVRKLMADMEIRKEPGYS 479
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 7/175 (4%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALK 165
E + D ++S+++ S L +M S + P + S+ SA A L +L
Sbjct: 63 ETPRRDLHLYSSLLAAVSHSESPELVLPLLRRMLSADALRPDHFVLASIASATARLRSLC 122
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
LGK+ HGH + + + D+ + ++LI MY KCG P AR+ FD K + W A+ISG
Sbjct: 123 LGKQLHGHFVASPYSSDDVVKSSLIDMYCKCGVPDDARKVFDSIVAK--NSVMWTALISG 180
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
Y NG + A+E+F M + ++ A++S +G A+++F M D
Sbjct: 181 YVLNGRSDEALELFRSMPGRTL----FAWTALISGFVRSGESVSAVKLFVDMRRD 231
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 213/386 (55%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+SACA ++ GRQVH S+ I AL+D+Y KCG
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG-------- 247
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ E A LFEGL+ + D +WN++I G++ + +
Sbjct: 248 ------------------------QVETACGLFEGLSCK----DVVSWNTLIGGYTHMNL 279
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--DLNKDESMA 186
EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + D+ S+
Sbjct: 280 YKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR 339
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A + F+ K + WNAMI G+ +G + ++F M++
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHK--SLSSWNAMIFGFAMHGRANAGFDLFSRMRKNG 397
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +FV +LSAC H+G +D IF M D+ + PK EH+GCM+DLLG SG EA
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEA 457
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+E+I+ +P EP ++ SLL AC H N +L E A L ++EPENP +V+LSNIYA
Sbjct: 458 KEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATA 517
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G W++V ++R ++N + + K+PG S+
Sbjct: 518 GEWDEVAKVRALLNGKGMKKVPGCSS 543
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 195/383 (50%), Gaps = 18/383 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA + G+Q+HG LK+ + D + T+L+ MY + G L AH V
Sbjct: 64 PNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKV 123
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ +I G +G A E+F+ + + D +WN+MISG+++ G
Sbjct: 124 FDR-SSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVK----DVVSWNAMISGYAETGS 178
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + +VLSACA +++LG++ H + + + A
Sbjct: 179 YKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNA 238
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCGQ A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 239 LIDLYSKCGQVETACGLFEGLSCK--DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGES 296
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMD---DDFGLKPKQEHFGCMVDLLGRSGRLDE 305
PN + V++L AC H G +D I +D D P ++D+ + G ++
Sbjct: 297 PNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEA 354
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNIYA 363
A ++ + ++S +++++ H ++ G ++ ++++ +EP++ T FV L + +
Sbjct: 355 AHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDIT-FVGLLSACS 413
Query: 364 GLGRWEDVGR--IRQMINDRQLT 384
G+ D+GR + M D +T
Sbjct: 414 HSGKL-DLGRHIFKSMTQDYDIT 435
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 156/355 (43%), Gaps = 74/355 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
P A +VF ++ N L WNTM+ G L+ DP +
Sbjct: 16 FPYAISVFATIQ-EPNQLIWNTMLRGYALSS-------------------DPVS------ 49
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA A + G++ HGHV++
Sbjct: 50 ----------ALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEP 99
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY + G+ A + FD+ EI
Sbjct: 100 DLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIP 159
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMISGY G Y+ A+E+F M + V+P+ + V VLSAC + V+ Q
Sbjct: 160 VKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQ 219
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD G + ++DL + G+++ A L L V +++L+G + H+
Sbjct: 220 VHSWIDDH-GFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGG-YTHM 277
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNI--YAGLGRWEDVGRIRQMINDRQL 383
N L +E + QEM E+P I+S + A LG D+GR + D++L
Sbjct: 278 N--LYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI-DIGRWIHVYIDKKL 329
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 14/249 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM--IGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + GR +H K K + T+L+DMY KCG +
Sbjct: 295 ESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEA 354
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ +WN MI G ++GR+ +LF + G +PD T+ ++S S
Sbjct: 355 AHQVFNSML-HKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS 413
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
G +F+ M Q + P L+ C+ +L L KE + +
Sbjct: 414 HSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSG------LFKEAKEMIKTMPME 467
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ + G A F +++P++P + + + Y GE++ ++
Sbjct: 468 PDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVR 527
Query: 240 DLMQQEKVK 248
L+ + +K
Sbjct: 528 ALLNGKGMK 536
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/450 (33%), Positives = 235/450 (52%), Gaps = 70/450 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T +SV+ A ++L + G+++HG ++ S I TALVDMY KCG L A
Sbjct: 233 KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP---------------- 111
+F + RN+++WN+MI + N ++AM +F+ + EG KP
Sbjct: 293 LFDGML-ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 112 -------------------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV------- 145
+ + NS+IS + + A +F K+QS +V
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 146 ------------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
P SV++A A+LS K HG V+R+ L+K
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDK 471
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+ MY KCG AR FD + WNAMI GYG +G ++A+E+F+
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDM--MSERHVTTWNAMIDGYGTHGFGKAALELFEE 529
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ +KPN +F++V+SAC H+G V+ L+ F MM +++ ++ +H+G MVDLLGR+G
Sbjct: 530 MQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAG 589
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RL+EA + I ++P +P V+VY ++LGAC H N + E+ A +L E+ P++ V+L+N
Sbjct: 590 RLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLAN 649
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IY WE VG++R + + L K PG S
Sbjct: 650 IYRAASMWEKVGQVRVSMLRQGLRKTPGCS 679
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F ++ C L+ G+++HGL +K D T L +MY KC + A
Sbjct: 132 EPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARK 191
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D +WN++++G+SQ G
Sbjct: 192 VFDRMP------------------------------------ERDLVSWNTIVAGYSQNG 215
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M A ++ + M + PS + SVL A + L + +GKE HG+ +R+ + +++T
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST 275
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ FD + + WN+MI Y +N + A+ IF M E V
Sbjct: 276 ALVDMYAKCGSLETARQLFDG--MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP S + L AC G +++ + + + GL ++ + + +D A
Sbjct: 334 KPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 308 ELIRELPEPTVSVYHSLL 325
+ +L T+ +++++
Sbjct: 393 SMFGKLQSRTLVSWNAMI 410
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 158/351 (45%), Gaps = 51/351 (14%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ C+SL L RQ+ L K + T LV ++ + G + A VF+ +
Sbjct: 43 LLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N+L +++M+ GF+++ +A + F
Sbjct: 100 NVL------------------------------------YHTMLKGFAKVSDLDKALQFF 123
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M+ + P + T +L C D + L++GKE HG ++++ + D T L +MY KC
Sbjct: 124 VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC 183
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
Q + AR+ FD+ + D WN +++GY +NG A+E+ M +E +KP+ + V+
Sbjct: 184 RQVNEARKVFDR--MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 257 VLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VL A V K + + M G +VD+ + G L+ AR+L +
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRS---GFDSLVNISTALVDMYAKCGSLETARQLFDGML 298
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIYA 363
E V ++S++ A ++ ++ +E + Q+M E PT ++ ++A
Sbjct: 299 ERNVVSWNSMIDA---YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 211/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN +T +V+S CA L L+ G ++ L S+ ++ TA+++MY+KCG +
Sbjct: 225 EPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D TW++MI+G++Q G
Sbjct: 285 VFDHMA------------------------------------RRDVVTWSAMIAGYAQNG 308
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LFE M+S + P+ + SVLSACA L +++ G+ +V L + +A+
Sbjct: 309 RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 368
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ FD+ + D WN+MI G NG E A+ +++ M++ +V
Sbjct: 369 ALLGMYSKCGNIIKARQIFDKLPQR--DNVTWNSMIMGLAINGFAEDAIALYNRMKEIEV 426
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ +FV +++AC HAGHV+ L+ F M D + P EHF C+VDL RSGRL +A
Sbjct: 427 KPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAY 486
Query: 308 ELI-RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I R EP V ++ +LL A HLN +L E KL E+EP+N +VILSNIYA G
Sbjct: 487 EFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAG 546
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ ++R+++ D+++ K S
Sbjct: 547 RWQEALKVRKLMKDKRVQKAAAYS 570
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 173/345 (50%), Gaps = 14/345 (4%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + +CASLL + G+QVH L ++ S AL++ Y K L A +F +
Sbjct: 98 TIPPIFKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGI 157
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ + +N +I+ +G A ELF+ + +WN+MIS ++Q G +
Sbjct: 158 L-VKDTIAYNCLISAYSRSGEVLAARELFDKMRDRSI----VSWNAMISCYAQNGDYHKG 212
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ +F++MQ P+ + +VLS CA L L++G +L + ++TA++ M
Sbjct: 213 WIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEM 272
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y+KCG R FD + D W+AMI+GY +NG A+E+F+ M+ ++KPN
Sbjct: 273 YVKCGAVDDGRLVFDHMARR--DVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDV 330
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V+VLSAC G V+ +I + ++ GL ++ + + G + +AR++ +
Sbjct: 331 TLVSVLSACAQLGSVETGERIGSYVESR-GLISNVYVASALLGMYSKCGNIIKARQIFDK 389
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMA----MKLQEMEPENPT 353
LP+ ++S++ +N + +A MK E++P N T
Sbjct: 390 LPQRDNVTWNSMIMG--LAINGFAEDAIALYNRMKEIEVKPNNIT 432
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 41/322 (12%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+ A ++F+ + H PD S I+ +S+L + EA + F M + + +
Sbjct: 47 QYARQVFDQIPH----PDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPI 102
Query: 155 LSACADLSALKLGKETHGHVIR-----------------ADLN--------------KDE 183
+CA L A+ +GK+ H VIR A +N KD
Sbjct: 103 FKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDT 162
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
LIS Y + G+ AR FD+ ++ WNAMIS Y +NG+Y IF MQ
Sbjct: 163 IAYNCLISAYSRSGEVLAARELFDK--MRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQ 220
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
E +PN + VLS C G ++ L+I ++D+ L M+++ + G +
Sbjct: 221 DEMCEPNEITLATVLSICAKLGDLEMGLRI-KKLNDNKNLGSNMIVSTAMLEMYVKCGAV 279
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI 361
D+ R + + V + +++ + S+ E+ MK +++P + T +LS
Sbjct: 280 DDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSAC 339
Query: 362 YAGLGRWEDVGRIRQMINDRQL 383
A LG E RI + R L
Sbjct: 340 -AQLGSVETGERIGSYVESRGL 360
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 210/394 (53%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E ++ TA++ Y + G + A +F E+ RN ++W M
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF-EVMPERNEVSWTAM 242
Query: 85 IAGMMLNGRSEKAMELFEGLAHE----------GF-----------------KPDPATWN 117
+ G + G E A ELF + GF + D TW+
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWS 302
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI + Q EA F +M G+ P+ V S+L+ CA L+ L G+E H ++R
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +ALI+MY+KCG A+R F FE P D WN+MI+GY ++G E A+
Sbjct: 363 SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE--PKDIVMWNSMITGYAQHGLGEQALG 420
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IF M+ + P+ +++ L+AC + G V + +IF M + ++P EH+ CMVDLL
Sbjct: 421 IFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL 480
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GRSG ++EA +LI+ +P EP ++ +L+GAC H N+++ E A KL E+EP N P+V
Sbjct: 481 GRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYV 540
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS+IY +GRWED ++R+ I+ R L K PG S
Sbjct: 541 LLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 26/280 (9%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
AL+ Y + A +F+ + SR++ ++N +I+G+ L R + + LA F
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMP-SRDLASYNALISGLSL--RRQTLPDAAAALASIPF 108
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P ++ S++ G+ + G+ +A +LF++M V + +L A A +L E
Sbjct: 109 PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDE 168
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
++D TA++S Y + G+ + AR FD E+ + W AMISGY +N
Sbjct: 169 MP--------DRDVVAWTAMLSGYCQAGRITEARALFD--EMPKRNVVSWTAMISGYAQN 218
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
GE A ++F++M + N S+ A+L AGHV+ A ++F M P+
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-------PEHPV 267
Query: 290 FGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
C M+ G+ G +D A+ + ++ E + +++ A
Sbjct: 268 AACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKA 307
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + IS+++ CA+L L +GR+VH L+ D +AL+ MY+KCG L A
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKR 389
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++I+ WN+MI G +G E+A+ +F + G PD T+ ++ S G
Sbjct: 390 VFHTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 128 MRFEAFKLFEKM 139
E ++F M
Sbjct: 449 KVKEGREIFNSM 460
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 148/347 (42%), Gaps = 69/347 (19%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
T+L+ Y++ G L A +FQ++ RN +++ ++ G++ GR +A LF+ +
Sbjct: 116 TSLLRGYVRHGLLADAIRLFQQMP-ERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR-- 172
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D W +M+SG+ Q G EA LF++M +V T+++S A + L ++
Sbjct: 173 --DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARK 226
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP-AFWNAMISGYGR 228
+ ++E TA++ Y++ G A F+ P+ P A NAM+ G+G+
Sbjct: 227 ----LFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAM---PEHPVAACNAMMVGFGQ 279
Query: 229 NGEYESAVEIFDLMQQEK-------------------------------VKPNSASFVAV 257
G ++A +F+ M++ V+PN S +++
Sbjct: 280 RGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISI 339
Query: 258 LSACGHAGHVDKALQIFTMM------DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
L+ C +D ++ M D F + ++ + + G LD+A+ +
Sbjct: 340 LTVCAALAVLDYGREVHAAMLRCSFDMDVFAV-------SALITMYIKCGNLDKAKRVFH 392
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQEMEPENPT 353
+ +++S++ H LGE+ M+L M P+ T
Sbjct: 393 TFEPKDIVMWNSMITGYAQH---GLGEQALGIFHDMRLAGMSPDGIT 436
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 211/386 (54%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+SACA ++ GRQVH S+ I AL+D+Y KCG L
Sbjct: 221 PDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGEL------ 274
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A LFEGL ++ D +WN++I G++ + +
Sbjct: 275 --------------------------ETACGLFEGLPYK----DVISWNTLIGGYTHMNL 304
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESMA 186
EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + + S+
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A + F+ I + WNAMI G+ +G +++ +IF M++
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNG 422
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +FV +LSAC H+G +D IF M D+ + PK EH+GCM+DLLG SG EA
Sbjct: 423 IEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEA 482
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+I + EP ++ SLL AC H N +LGE A L ++EPENP +V+LSNIYA
Sbjct: 483 EEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATA 542
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V R ++ND+ + K+PG S+
Sbjct: 543 GRWNEVANTRALLNDKGMKKVPGCSS 568
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 194/382 (50%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA + G+Q+HG LK+ D + T+L+ MY++ G L AH V
Sbjct: 89 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 148
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E R+++++ +I G G E A ++F+ + D +WN+MISG+++ G
Sbjct: 149 FDE-SPHRDVVSYTALIKGYASRGYIENAQKMFDEIP----VKDVVSWNAMISGYAETGN 203
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF+ M T + P + +V+SACA +++LG++ H + + + A
Sbjct: 204 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNA 263
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 264 LIDLYSKCGELETACGLFEGLPYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 321
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G +D I +D G+ ++D+ + G ++ A
Sbjct: 322 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAH 381
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H +D ++ ++++ +EP++ T +LS ++G
Sbjct: 382 QVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSG 441
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 442 M---LDLGRHIFRSMTQDYKMT 460
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 74/363 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N+L WNTM G L+ DP +
Sbjct: 41 LPYAISVFETIQ-EPNLLIWNTMFRGHALSS-------------------DPVS------ 74
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA A K G++ HGHV++ +
Sbjct: 75 ----------ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDL 124
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY++ G+ A + FD+ EI
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMISGY G Y+ A+E+F M + V+P+ ++ V V+SAC +G ++ Q
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 244
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD G + ++DL + G L+ A L LP V +++L+G + H+
Sbjct: 245 VHSWIDDH-GFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGG-YTHM 302
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNI--YAGLGRWEDVGRIRQMINDRQLTKLPG 388
N L +E + QEM E P +LS + A LG D+GR + D++L +
Sbjct: 303 N--LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI-DIGRWIHVYIDKRLKGVAN 359
Query: 389 ISA 391
S+
Sbjct: 360 ASS 362
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 14/249 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 320 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEA 379
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ +WN MI G ++GR++ + ++F + G +PD T+ ++S S
Sbjct: 380 AHQVFNSIL-HKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACS 438
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M Q M P L+ C+ +L L KE + ++
Sbjct: 439 HSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSG------LFKEAEEMINTMEME 492
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G F +I+P++P + + + Y G +
Sbjct: 493 PDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEVANTR 552
Query: 240 DLMQQEKVK 248
L+ + +K
Sbjct: 553 ALLNDKGMK 561
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 209/385 (54%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VTF+ ++SACA+ G+ +H L+ +S+ + AL++MY +CG L A N
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQN 487
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + D +WNSMI+G +Q G
Sbjct: 488 VFEGTQAR------------------------------------DVISWNSMIAGHAQHG 511
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A+KLF++MQ+ + P SVLS C + AL+LGK+ HG + + L D ++
Sbjct: 512 SYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGN 571
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY++CG AR F + + D W AMI G GE A+E+F MQ E
Sbjct: 572 ALINMYIRCGSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGEDMKAIELFWQMQNEGF 629
Query: 248 K-PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ P+ ++F ++LSAC HAG V + QIF+ M+ ++G+ P EH+GC+V LLGR+ R EA
Sbjct: 630 RPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEA 689
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
LI ++P P +V+ +LLGAC H N L E A ++ NP +++LSN+YA
Sbjct: 690 ETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAA 749
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV +IR+++ R + K PG S
Sbjct: 750 GRWDDVAKIRRVMEGRGIRKEPGRS 774
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 171/331 (51%), Gaps = 44/331 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T++S+++AC++ L+ G+ +H + SD IG AL+ MY +CG LP
Sbjct: 329 NRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLP------ 382
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
KA ELF + K D +WN++I+G+++ R
Sbjct: 383 --------------------------KARELFYTMP----KRDLISWNAIIAGYARREDR 412
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +L+++MQS G+ P +LSACA+ SA GK H ++R+ + + +A AL
Sbjct: 413 GEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANAL 472
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG A+ F+ + + D WN+MI+G+ ++G YE+A ++F MQ E+++P
Sbjct: 473 MNMYRRCGSLMEAQNVFEGTQAR--DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEP 530
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ +F +VLS C + ++ QI + + GL+ ++++ R G L +AR +
Sbjct: 531 DNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNV 589
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
L V + +++G C +D GE+M
Sbjct: 590 FHSLQHRDVMSWTAMIGGC-----ADQGEDM 615
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 178/373 (47%), Gaps = 56/373 (15%)
Query: 1 MKECL------SDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA 51
+KECL S E P+ VT+I+++ A + L G+++H LT++ SD +GTA
Sbjct: 210 VKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTA 269
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
LV M ++CG + + A + F+G+A
Sbjct: 270 LVTMCVRCGDV--------------------------------DSAKQAFKGIADR---- 293
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +N++I+ +Q G EAF+ + +M+S G+ + S+L+AC+ AL+ GK H
Sbjct: 294 DVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIH 353
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H+ + D + ALISMY +CG AR F + + D WNA+I+GY R +
Sbjct: 354 SHISEDGHSSDVQIGNALISMYARCGDLPKARELF--YTMPKRDLISWNAIIAGYARRED 411
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQE 288
A+ ++ MQ E VKP +F+ +LSAC ++ A M+ +D G+K
Sbjct: 412 RGEAMRLYKQMQSEGVKPGRVTFLHLLSACANS----SAYADGKMIHEDILRSGIKSNGH 467
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--E 346
++++ R G L EA+ + V ++S++ H + + ++ ++Q E
Sbjct: 468 LANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEE 527
Query: 347 MEPENPTPFVILS 359
+EP+N T +LS
Sbjct: 528 LEPDNITFASVLS 540
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 152/324 (46%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + T+++++ C L +++H ++ D + L++MY+KC + AH
Sbjct: 24 ETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQ 83
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ + D +WNS+IS ++Q G
Sbjct: 84 VFKEMP------------------------------------RRDVISWNSLISCYAQQG 107
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +AF+LFE+MQ+ G +P+ S+L+AC + L+ GK+ H +I+A +D +
Sbjct: 108 FKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQN 167
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+SMY KCG AR+ F I P D +N M+ Y + + + +F M E +
Sbjct: 168 SLLSMYGKCGDLPRARQVFAG--ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +++ +L A +D+ +I + ++ GL +V + R G +D A+
Sbjct: 226 SPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE-GLNSDIRVGTALVTMCVRCGDVDSAK 284
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ + + + V VY++L+ A H
Sbjct: 285 QAFKGIADRDVVVYNALIAALAQH 308
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 213/385 (55%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ ++VT + +I AC+ L +F + + + D +G L+DMY + A
Sbjct: 214 KADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQG 273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RNI++WN ++ G G A +LF+ + K D +W SMI+G+SQ
Sbjct: 274 VFDRMR-ERNIVSWNALVMGHAKVGNLTAARKLFDNMP----KRDVISWTSMITGYSQAS 328
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A KLF++M + + P V SVLSACA L L +G H ++ R + D +
Sbjct: 329 QFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGN 388
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A F + +K D W ++ISG NG SA+++F M +E V
Sbjct: 389 SLIDMYCKCGMVEKALEVFHR--MKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGV 446
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P +FV +L AC HAG V+K L+ F M+ GL P +H+GC+VDLL RSG +D+A
Sbjct: 447 QPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAY 506
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I+++P P V V+ LL AC H N L E +L E++P + +V+LSN YAG+
Sbjct: 507 EFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVD 566
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW+D ++R+++ D + K G S+
Sbjct: 567 RWDDAMKMRELMEDSDVQKPSGSSS 591
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 155/356 (43%), Gaps = 47/356 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N++T I + ACA + + GR++H LK+ +S + AL+ MY CG L A +F
Sbjct: 115 NNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMF 174
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ R++++WNT+I G + ++ + LF+ + K D T +I S LG
Sbjct: 175 DGML-DRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDW 233
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT-- 187
A + + ++ + + +++ S +L + D ++ ++ +
Sbjct: 234 EFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVF------DRMRERNIVSWN 287
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ + K G + AR+ FD + D W +MI+GY + ++ AV++F M KV
Sbjct: 288 ALVMGHAKVGNLTAARKLFDNMPKR--DVISWTSMITGYSQASQFSDAVKLFQEMMAAKV 345
Query: 248 KPNSASFVAVLSACGHAGHVD-----------------------------------KALQ 272
KP+ + +VLSAC H G +D KAL+
Sbjct: 346 KPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALE 405
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+F M D + G V+ S LD +++RE +PT + +L AC
Sbjct: 406 VFHRMKDKDSVSWTSVISGLAVNGFANSA-LDLFSQMLREGVQPTHGTFVGILLAC 460
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 13/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT SV+SACA L L G VH + Q+D +G +L+DMY KCG + A
Sbjct: 346 KPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALE 405
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K ++ ++W ++I+G+ +NG + A++LF + EG +P T+ ++ + G
Sbjct: 406 VFHRMK-DKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAG 464
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + + FE M+S G+VP++K CV +LS ++ + + + + + D
Sbjct: 465 LVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNID------KAYEFIKKMPIVPDV 518
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L+S G A + E+ P D + + + Y ++ A+++ +LM
Sbjct: 519 VVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELM 578
Query: 243 QQEKV-KPNSASFVAV 257
+ V KP+ +S + V
Sbjct: 579 EDSDVQKPSGSSSIEV 594
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P WN MI G SQ EA ++ +M G+ + + + ACA +S + G++
Sbjct: 79 PTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKI 138
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H ++ ++ ALI MY CGQ +A++ FD + D WN +I GY +
Sbjct: 139 HVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR--DLVSWNTLICGYSQYN 196
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+Y+ + +FD M +K ++ + V ++ AC H G + A + + ++ L+
Sbjct: 197 KYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKEN-NLEIDVYLG 255
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ GR + A+ + + E + +++L+
Sbjct: 256 NTLIDMYGRRSLAELAQGVFDRMRERNIVSWNALV 290
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 168 KETHGHVIRADLNKDESMATALISMY-MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
KE H H+IR L+ D + + +I Y + A F+Q E WN MI G
Sbjct: 34 KELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPT--LVVWNHMIRGL 91
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
++ A+ ++ M + + N+ + + + AC + +I
Sbjct: 92 SQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKI 138
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/385 (35%), Positives = 220/385 (57%), Gaps = 11/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACA+L L+ G ++H LK+ ++ + ++L+DMY KC A
Sbjct: 376 RPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQR 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L +N + WN++I+G NG+ +A EGL ++ + +WN+MISG+++
Sbjct: 436 VFNSLP-EKNTVCWNSLISGYSWNGKMVEA----EGLFNKMPARNSVSWNTMISGYAE-N 489
Query: 128 MRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
RF +A F M ++G +P ++SVL ACA+L +L++G+ H +++ + + M
Sbjct: 490 RRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMG 549
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL MY K G +RR F +++ + W AM+ G NG E ++ +F+ M +
Sbjct: 550 TALSDMYAKSGDLDSSRRVF--YQMPEKNNITWTAMVQGLAENGFAEESISLFEDMIENG 607
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ PN +F+A+L AC H G V++A+ F M G+ PK +H+ CMVD+L R+G L EA
Sbjct: 608 IAPNEHTFLAILFACSHCGLVEQAIHYFETMQAH-GIPPKSKHYTCMVDVLARAGCLPEA 666
Query: 307 RELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
EL+ ++ E S + SLL AC + N ++GE A KL E+E +N +V+LSN+YA
Sbjct: 667 EELLMKVSSELDTSSWSSLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASC 726
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+W+D R ++ L K G S
Sbjct: 727 GKWKDAAETRILMQGASLKKDAGCS 751
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 36/340 (10%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPC 64
S PN VT I VI AC V GL +K ++ + +L+ +YL+ G
Sbjct: 241 SVRPNVVTLICVIKACVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAA 300
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF +++ R++++W ++ G A + + + + +W ++I+
Sbjct: 301 AHRVFDDME-VRDVVSWTALLDVYADLGDLYGARRVLDAMPAR----NEVSWGTLIARHE 355
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA KL+ +M + G P++ C +SVLSACA L L+ G H + ++ + +
Sbjct: 356 QKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRGGTRIHANALKMGSSTNLF 415
Query: 185 MATALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDD 215
++++LI MY KC Q ++A+R F+ ++ +
Sbjct: 416 VSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSWNGKMVEAEGLFNKMPARN 475
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN MISGY N + A+ F M P + +VL AC + ++ +
Sbjct: 476 SVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLLACANLCSLEMGRMVHA 535
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ G++ + D+ +SG LD +R + ++PE
Sbjct: 536 EI-VKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPE 574
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 16/257 (6%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + ++++++ TM+ +M G A+EL+E
Sbjct: 155 MVSEHVKAGDIASARRLFYGMP-EKSVVSYTTMVDALMKRGSVRDAVELYERCPLHSV-- 211
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + +MISGF + + +AF +F KM + + P++ + V+ AC L
Sbjct: 212 --AFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAMGVV 269
Query: 172 GHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G ++ +L K + +LI++Y++ G + A R FD E++ D W A++ Y G
Sbjct: 270 GLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVR--DVVSWTALLDVYADLG 327
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A + D M N S+ +++ G +AL++++ M D G +P +
Sbjct: 328 DLYGARRVLDAMPAR----NEVSWGTLIARHEQKGDTAEALKLYSQMLAD-GCRP---NI 379
Query: 291 GCMVDLLGRSGRLDEAR 307
C +L L + R
Sbjct: 380 SCFSSVLSACATLQDLR 396
>gi|297800868|ref|XP_002868318.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
gi|297314154|gb|EFH44577.1| hypothetical protein ARALYDRAFT_330113 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 219/387 (56%), Gaps = 10/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F +++ ACA+L ++ G+QVH + E +D ++ ++LVDMY KC L CA
Sbjct: 39 RPDDFVFSALVKACANLGSIKLGKQVHCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKA 98
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N ++W M++G +GR E+A+ELF L + +W ++ISGF Q G
Sbjct: 99 VFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRRLPVKNL----YSWTALISGFVQSG 153
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EAF +F +M+ + + ++S++ ACA+L+A G++ HG VI + ++
Sbjct: 154 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 213
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KC A+ F + ++ D W ++I G ++G+ E A+ ++D M
Sbjct: 214 NALIDMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDEMVSHG 271
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +FV ++ AC H G V K ++F M D+G++P +H+ C++DLLGRSG LDEA
Sbjct: 272 VKPNEVTFVGLIYACSHVGFVAKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 331
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNIYAG 364
LI +P P + +LL AC +G +A L +P++P+ +++LSNIYA
Sbjct: 332 ENLIHTMPFPPDEPTWAALLSACKRQGQGQMGVRIADHLVSSFKPKDPSTYILLSNIYAS 391
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V R+ + D ++ K PG S+
Sbjct: 392 ASLWGKVSEARRKLGDMEVRKDPGYSS 418
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 91/167 (54%), Gaps = 7/167 (4%)
Query: 112 DPATWNSMISGFSQLGMRFEA-FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D W S+++ +Q + + + S+G+ P ++++ ACA+L ++KLGK+
Sbjct: 5 DHIAWASVLTALNQANLSGKTLWVFSSVGSSSGLRPDDFVFSALVKACANLGSIKLGKQV 64
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H I ++ + D+ + ++L+ MY KC A+ FD +K + W AM+SGY ++G
Sbjct: 65 HCHFIVSEYSNDDVVKSSLVDMYAKCRLLDCAKAVFDSIRVK--NTISWTAMVSGYAKSG 122
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
E A+E+F ++ VK N S+ A++S +G +A +FT M
Sbjct: 123 RKEEALELF---RRLPVK-NLYSWTALISGFVQSGKGLEAFSVFTEM 165
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 222/421 (52%), Gaps = 39/421 (9%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+EC+ + S++ VI AC L G+++H LKI SD + TAL++MY K G
Sbjct: 98 QECIPIDSYSLSL--VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGD 155
Query: 62 LPCAHNVFQELKG------------------------------SRNILTWNTMIAGMMLN 91
+ A N+ E+ R++++WNTMI G
Sbjct: 156 IEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASL 215
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G A +LF+ D +W+SMI+ +++ EA +LF +MQ ++P +
Sbjct: 216 GDVGTAKKLFDRTCER----DLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTM 271
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVLSAC D+ AL +GK H + R + D + T+L+ MY KCG + R F+
Sbjct: 272 VSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNN 331
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ D W+AMI G +G E A++ F M E +KPN +F+ VLSAC H G VD+
Sbjct: 332 R--DVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGW 389
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWC 330
FT M + + PK EH+GC+VD+LGR+GRL EA ELI+ +P P V+ +LLGAC
Sbjct: 390 TYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRI 449
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ N ++ EE + L E+EP +V+LSNIY+ W+ V +R+M+ + + K+PG S
Sbjct: 450 YKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSS 509
Query: 391 A 391
+
Sbjct: 510 S 510
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 147/365 (40%), Gaps = 45/365 (12%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGC---LPCAHNVFQELKGSRNILTWNTMIAGM 88
Q+H L +K + + L+ C L A +VF E+ S + WNTMI
Sbjct: 21 QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP-SPDTFIWNTMIRAY 79
Query: 89 MLNGRSEKAMELFEGLAHEGFKP-DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
+ + +++M LF + H+ P D + + +I +L KL ++ G+
Sbjct: 80 LNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSD 139
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
L T+++ A +++ + + DL L++ Y++ G+ + A FD
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVP----YNVLLAEYVRVGEINLAHDLFD 195
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL-------------------------- 241
+ + D WN MI G+ G+ +A ++FD
Sbjct: 196 RMPER--DLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEAL 253
Query: 242 -----MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
MQ V P+ + V+VLSACG G + I ++ + ++ + +VD+
Sbjct: 254 RLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN-RIEIDLKLGTSLVDM 312
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEMEPENPTP 354
+ G +D + + + V + +++ H +L + K+ ++++P + T
Sbjct: 313 YAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTF 372
Query: 355 FVILS 359
+LS
Sbjct: 373 IGVLS 377
>gi|449469094|ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Cucumis sativus]
Length = 611
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 225/387 (58%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F ++ AC+SL YL+ G+QVH + D ++ ++L+DMY KCG A
Sbjct: 102 QPDHFVFACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSSLIDMYTKCGQPDDARA 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEGFKPDPATWNSMISGFSQL 126
VF + +N ++W +MI+G +GR +AM+LF + F +W ++ISG Q
Sbjct: 162 VFDSIL-FKNSVSWTSMISGYARSGRKCEAMDLFLQAPVRNLF-----SWTALISGLIQS 215
Query: 127 GMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +F LF +M+ G+ + ++SV+ CA+L+ L+LGK+ HG VI +
Sbjct: 216 GHGIYSFSLFNEMRREGIDIVDPLVLSSVVGGCANLALLELGKQIHGLVIALGFESCLFI 275
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ AL+ MY KC A+ F + + D W ++I G ++G+ E A+ ++D M
Sbjct: 276 SNALVDMYAKCSDILAAKDIF--YRMPRKDVISWTSIIVGTAQHGKAEEALTLYDEMVLS 333
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++KPN +FV +L AC HAG V + ++F M D+ + P +H+ C++DLL RSG LDE
Sbjct: 334 RIKPNEVTFVGLLYACSHAGLVSRGRELFRSMTTDYSINPSLQHYTCLLDLLSRSGHLDE 393
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A L+ ++P +P + SLL AC H N ++G +A ++ +++PE+P+ +++LSN+YAG
Sbjct: 394 AENLLDKIPFKPDEPTWASLLSACMRHNNLEMGVRIADRVLDLKPEDPSTYILLSNVYAG 453
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V ++R++++ ++ K PG S+
Sbjct: 454 AEMWGSVSKVRKLMSSMEVRKEPGYSS 480
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 43/269 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F+ + CA ++H +K +++ L+D+Y KCG +P A +F
Sbjct: 2 NISHFLHQLQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQLGM 128
E+ +R+ ++W +++ + + + + H+G +PD +
Sbjct: 62 DEMP-NRDHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVF------------ 108
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++ AC+ L L+LGK+ H + + DE + ++
Sbjct: 109 -----------------------ACIVRACSSLGYLRLGKQVHARFMLSFFCDDEVVKSS 145
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQP AR FD K + W +MISGY R+G E DL Q V+
Sbjct: 146 LIDMYTKCGQPDDARAVFDSILFK--NSVSWTSMISGYARSGR---KCEAMDLFLQAPVR 200
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMM 277
N S+ A++S +GH + +F M
Sbjct: 201 -NLFSWTALISGLIQSGHGIYSFSLFNEM 228
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L CA + E H +I+A +K ++ L+ +Y KCG A + FD E+
Sbjct: 10 LQLCARRQSASAAGELHSQIIKAGFDKSSLLSNTLLDVYGKCGLIPQALQLFD--EMPNR 67
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D W ++++ + + + + + M + ++P+ F ++ AC G++ Q+
Sbjct: 68 DHVSWASILTAHNKALIPRRTLSMLNTMFTHDGLQPDHFVFACIVRACSSLGYLRLGKQV 127
Query: 274 -----FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ DD +K ++D+ + G+ D+AR +
Sbjct: 128 HARFMLSFFCDDEVVKSS------LIDMYTKCGQPDDARAV 162
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 209/380 (55%), Gaps = 39/380 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V+ ++ + AC L L G +VH L ++I S+ + AL+ MY KC + A +VF E
Sbjct: 263 VSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDE 322
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L + +WN+MI G +Q G +
Sbjct: 323 LDRRTQV------------------------------------SWNAMILGCAQNGCSED 346
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF +MQ + P + SV+ A AD+S + HG+ IR L++D + TALI
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALID 406
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ + AR F+ + WNAMI GYG +G ++AVE+F+ M+ + PN
Sbjct: 407 MYAKCGRVNIARILFNS--ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNE 464
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F++VLSAC HAG VD+ + FT M +D+GL+P EH+G MVDLLGR+G+LDEA I+
Sbjct: 465 TTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQ 524
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++P +P +SVY ++LGAC H N +L EE A K+ E+ P+ V+L+NIYA W+D
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V R+R + L K PG S
Sbjct: 585 VARVRTAMEKNGLQKTPGWS 604
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 159/356 (44%), Gaps = 41/356 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF S++ CA+ L GR VH S+ + TAL +MY KC A V
Sbjct: 57 PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATWNSMISGFSQLG 127
F + R+ + WN ++AG NG + AME+ + EG +PD T
Sbjct: 117 FDRMP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT------------ 163
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL ACA+ AL +E H IR+ L + ++AT
Sbjct: 164 -----------------------LVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ Y KCG AR FD K + WNAMI GY +NG+ A+ +F+ M +E V
Sbjct: 201 AILDAYCKCGDIRAARVVFDWMPTK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEGV 258
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S +A L ACG G +D+ +++ ++ GL ++ + + R+D A
Sbjct: 259 DVTDVSVLAALQACGELGCLDEGMRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ EL T +++++ C + S+ + ++Q +E P F ++S I A
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQ-LENVKPDSFTLVSVIPA 372
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 46/370 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E + P+S+T +SV+ ACA+ L R+ H ++ + + TA++D Y KCG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF + ++N ++WN MI G NG S +A+ LF + EG +
Sbjct: 211 DIRAARVVFDWMP-TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVS----- 264
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
V + L AC +L L G H ++R L+
Sbjct: 265 ------------------------------VLAALQACGELGCLDEGMRVHELLVRIGLD 294
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ S+ ALI+MY KC + A FD+ + + WNAMI G +NG E AV +F
Sbjct: 295 SNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ--VSWNAMILGCAQNGCSEDAVRLFT 352
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLG 298
MQ E VKP+S + V+V+ A + LQ + L Q+ + ++D+
Sbjct: 353 RMQLENVKPDSFTLVSVIPAL---ADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 409
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFV 356
+ GR++ AR L E V +++++ H E+ MK + P T
Sbjct: 410 KCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 357 ILSNI-YAGL 365
+LS +AGL
Sbjct: 470 VLSACSHAGL 479
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A F M S G P L+ TS+L CA L G+ H + ++ + ATAL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPN 250
MY KC +P+ ARR FD+ ++ D WNA+++GY RNG A+E+ MQ+E+ +P+
Sbjct: 103 MYAKCRRPADARRVFDRMPVR--DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160
Query: 251 SASFVAVL 258
S + V+VL
Sbjct: 161 SITLVSVL 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T +SVI A A + R +HG ++++ D + TAL+DMY KCG + A
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI G +G + A+ELFE + G P+ T+ S++S S G
Sbjct: 420 LFNSAR-ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E + F M + G+ P ++
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGME 501
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 213/362 (58%), Gaps = 8/362 (2%)
Query: 19 SACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNI 78
S CA L L +VHG +K + AL+ +Y K G + A ++F++++ ++ I
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIR-NKGI 360
Query: 79 LTWNTMIAGMMLNGRSEKAMELF---EGLAHE-GFKPDPATWNSMISGFSQLGMRFEAFK 134
+WN++I + G+ ++A+ LF E + H K + TW S+I G + G ++ +
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +MQ + ++ + + +LS CA+L AL LG+E HGHVIR ++++ + AL++MY
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYA 480
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG S F+ I+ D WN++I GYG +G E A+ +FD M P+ +
Sbjct: 481 KCGLLSEGSLVFEA--IRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIAL 538
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLSAC HAG V+K +IF M FGL+P+QEH+ C+VDLLGR G L EA E+++ +P
Sbjct: 539 VAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
EP V V +LL +C H N D+ E +A +L +EPE +++LSNIY+ GRWE+
Sbjct: 599 MEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESAN 658
Query: 374 IR 375
+R
Sbjct: 659 VR 660
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 131/265 (49%), Gaps = 7/265 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ AC L R H ++I + + + L+ +Y K G + A+N+F E+ R
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP-VR 222
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N ++WN MI G E A+++FE + E FKPD TW S++S SQ G + K F
Sbjct: 223 NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYF 282
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M+ +G S + + S CA+L AL + ++ HG+VI+ + ALI +Y K
Sbjct: 283 HLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQ 342
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE----KVKPNSA 252
G+ A F Q K + WN++I+ + G+ + A+ +F +++ VK N
Sbjct: 343 GKVKDAEHLFRQIRNKGIES--WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 253 SFVAVLSACGHAGHVDKALQIFTMM 277
++ +V+ C G D +L+ F M
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 2/161 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVT ++S CA L L GR++HG ++ + ++ ALV+MY KCG L VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVF 492
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ +++++WN++I G ++G +EKA+ +F+ + GF PD +++S S G+
Sbjct: 493 EAIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLV 551
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ ++F M + G+ P + ++ + LK E
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 48/254 (18%)
Query: 31 RQVHGLTLKIEKQSDTM-----IGTALVDMYLKCGCLPCAHNVFQ--ELKGSRNILTWNT 83
RQVH L SD + + L+ +Y + G L A NVF+ L ++ WN+
Sbjct: 73 RQVHAQVL----LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNS 128
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
++ + +G E A+EL+ G+ G D G
Sbjct: 129 ILKANVSHGLYENALELYRGMRQRGLTGD------------------------------G 158
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ L +L AC L L + H VI+ L ++ + L+++Y K G+ A
Sbjct: 159 YILPL-----ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAY 213
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F + ++ + WN MI G+ + + ESAV+IF+ MQ+E+ KP+ ++ +VLS
Sbjct: 214 NLFVEMPVR--NRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQ 271
Query: 264 AGHVDKALQIFTMM 277
G + L+ F +M
Sbjct: 272 CGKFEDVLKYFHLM 285
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 143/380 (37%), Positives = 209/380 (55%), Gaps = 39/380 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V+ ++ + AC L L G +VH L ++I S+ + AL+ MY KC + A +VF E
Sbjct: 263 VSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDE 322
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L + +WN+MI G +Q G +
Sbjct: 323 LDRRTQV------------------------------------SWNAMILGCAQNGCSED 346
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF +MQ + P + SV+ A AD+S + HG+ IR L++D + TALI
Sbjct: 347 AVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALID 406
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ + AR F+ + WNAMI GYG +G ++AVE+F+ M+ + PN
Sbjct: 407 MYAKCGRVNIARILFNS--ARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNE 464
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F++VLSAC HAG VD+ + FT M +D+GL+P EH+G MVDLLGR+G+LDEA I+
Sbjct: 465 TTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQ 524
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++P +P +SVY ++LGAC H N +L EE A K+ E+ P+ V+L+NIYA W+D
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKD 584
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V R+R + L K PG S
Sbjct: 585 VARVRTAMEKNGLQKTPGWS 604
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 159/356 (44%), Gaps = 41/356 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P TF S++ CA+ L GR VH S+ + TAL +MY KC A V
Sbjct: 57 PVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRV 116
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATWNSMISGFSQLG 127
F + R+ + WN ++AG NG + AME+ + EG +PD T
Sbjct: 117 FDRMP-VRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSIT------------ 163
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL ACA+ AL +E H IR+ L + ++AT
Sbjct: 164 -----------------------LVSVLPACANARALAACREAHAFAIRSGLEELVNVAT 200
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ Y KCG AR FD K + WNAMI GY +NG+ A+ +F+ M +E V
Sbjct: 201 AILDAYCKCGDIRAARVVFDWMPTK--NSVSWNAMIDGYAQNGDSREALALFNRMVEEGV 258
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S +A L ACG G +D+ +++ ++ GL ++ + + R+D A
Sbjct: 259 DVTDVSVLAALQACGELGCLDEGMRVHELL-VRIGLDSNVSVMNALITMYSKCKRVDLAS 317
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ EL T +++++ C + S+ + ++Q +E P F ++S I A
Sbjct: 318 HVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQ-LENVKPDSFTLVSVIPA 372
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 46/370 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E + P+S+T +SV+ ACA+ L R+ H ++ + + TA++D Y KCG
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF + ++N ++WN MI G NG S +A+ LF + EG +
Sbjct: 211 DIRAARVVFDWMP-TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVS----- 264
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
V + L AC +L L G H ++R L+
Sbjct: 265 ------------------------------VLAALQACGELGCLDEGMRVHELLVRIGLD 294
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ S+ ALI+MY KC + A FD+ + + WNAMI G +NG E AV +F
Sbjct: 295 SNVSVMNALITMYSKCKRVDLASHVFDELDRRTQ--VSWNAMILGCAQNGCSEDAVRLFT 352
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLG 298
MQ E VKP+S + V+V+ A + LQ + L Q+ + ++D+
Sbjct: 353 RMQLENVKPDSFTLVSVIPAL---ADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYA 409
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFV 356
+ GR++ AR L E V +++++ H E+ MK + P T
Sbjct: 410 KCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLS 469
Query: 357 ILSNI-YAGL 365
+LS +AGL
Sbjct: 470 VLSACSHAGL 479
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A F M S G P L+ TS+L CA L G+ H + ++ + ATAL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPN 250
MY KC +P+ ARR FD+ ++ D WNA+++GY RNG A+E+ MQ+E+ +P+
Sbjct: 103 MYAKCRRPADARRVFDRMPVR--DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160
Query: 251 SASFVAVL 258
S + V+VL
Sbjct: 161 SITLVSVL 168
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T +SVI A A + R +HG ++++ D + TAL+DMY KCG + A
Sbjct: 360 KPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARI 419
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI G +G + A+ELFE + G P+ T+ S++S S G
Sbjct: 420 LFNSAR-ERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E + F M + G+ P ++
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGME 501
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 208/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SV+ A A + L + +HG LK +D + AL+ Y KCGC+
Sbjct: 246 PNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCI------ 299
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E++MELFE L+ + +WN++I + QLG
Sbjct: 300 --------------------------EQSMELFEALSDR----NDVSWNTIIVSYVQLGD 329
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LF M + + +S+L ACA L+AL+LG + H + +D ++ A
Sbjct: 330 GERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNA 389
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD +++ D WNA+I GY +G A+++F+LM++ K K
Sbjct: 390 LIDMYAKCGSIKDARFMFDMLDLR--DKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCK 447
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC + G +D+ Q FT M D+G++P EH+ CMV L+GRSG LD+A +
Sbjct: 448 PDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVK 507
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P EP+V ++ +LLGAC H + +LG A ++ E+EP + V+LSNIYA R
Sbjct: 508 FIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRDEASHVLLSNIYARARR 567
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V +R+ + + + K PG+S
Sbjct: 568 WGNVAYVRKHMKRKGVKKEPGLS 590
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 136/305 (44%), Gaps = 49/305 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ TF V+ AC L G+ VH LK + D +G L+++Y +CG A
Sbjct: 144 KPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDDAWR 203
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ K D W+ MIS F+Q G
Sbjct: 204 AFGDMP------------------------------------KNDVIPWSFMISRFAQSG 227
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F +M+ ++P+ +SVL A AD+ +L L K HGH ++A L+ D ++
Sbjct: 228 QSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSN 287
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++ Y KCG + F+ + D WN +I Y + G+ E A+ +F M + +V
Sbjct: 288 ALMACYAKCGCIEQSMELFEALSDRND--VSWNTIIVSYVQLGDGERALSLFSNMLRYQV 345
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ ++ ++L AC ++ LQ+ T+ D + ++D+ + G
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVG------NALIDMYAKCGS 399
Query: 303 LDEAR 307
+ +AR
Sbjct: 400 IKDAR 404
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 38/261 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N F +V+ S+ + + GR VHG LK+ S+T IGTAL+D Y GC+ A
Sbjct: 43 ELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMARE 102
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ D +W MI+ +++
Sbjct: 103 VFDEISS------------------------------------KDMVSWTGMIASYAEND 126
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F +M+ G P+ VL AC L GK H V++ + +D +
Sbjct: 127 CFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGV 186
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ +Y +CG A R F ++ +D W+ MIS + ++G+ E A+EIF M++ V
Sbjct: 187 GLLELYTRCGDNDDAWRAFG--DMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFV 244
Query: 248 KPNSASFVAVLSACGHAGHVD 268
PN +F +VL A +D
Sbjct: 245 IPNQFTFSSVLQASADIESLD 265
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ VT+ S++ ACA+L L+ G QVH LT K D +G AL+DMY KCG + A
Sbjct: 346 QATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARF 405
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L R+ ++WN +I G ++G +A+++F + KPD T+ ++S S G
Sbjct: 406 MFDMLD-LRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTG 464
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVL 155
E + F M Q G+ P ++ T ++
Sbjct: 465 RLDEGKQYFTSMKQDYGIEPCMEHYTCMV 493
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 210/394 (53%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E ++ TA++ Y + G + A +F E+ RN ++W M
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLF-EVMPERNEVSWTAM 242
Query: 85 IAGMMLNGRSEKAMELFEGLAHE----------GF-----------------KPDPATWN 117
+ G + G E A ELF + GF + D TW+
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI + Q EA F +M G+ P+ V S+L+ CA L+ L G+E H ++R
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +ALI+MY+KCG A+R F FE P D WN+MI+GY ++G E A+
Sbjct: 363 SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFE--PKDIVMWNSMITGYAQHGLGEQALG 420
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IF M+ + P+ +++ L+AC + G V + +IF M + ++P EH+ CMVDLL
Sbjct: 421 IFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL 480
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GRSG ++EA +LI+ +P EP ++ +L+GAC H N+++ E A KL E+EP N P+V
Sbjct: 481 GRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYV 540
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS+IY +GRWED ++R+ I+ R L K PG S
Sbjct: 541 LLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 26/280 (9%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
AL+ Y + A +F+ + SR++ ++N +I+G+ L R + + LA F
Sbjct: 52 NALLAGYFRNRLPDAALGLFRRMP-SRDLASYNALISGLSL--RRQTLPDAAAALASIPF 108
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P ++ S++ G+ + G+ +A +LF++M V + +L A A +L E
Sbjct: 109 PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDE 168
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
++D TA++S Y + G+ + AR FD E+ + W AMISGY +N
Sbjct: 169 MP--------DRDVVAWTAMLSGYCQAGRITEARALFD--EMPKRNVVSWTAMISGYAQN 218
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
GE A ++F++M + N S+ A+L AGHV+ A ++F M P+
Sbjct: 219 GEVNLARKLFEVMPER----NEVSWTAMLVGYIQAGHVEDAAELFNAM-------PEHPV 267
Query: 290 FGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
C M+ G+ G +D A+ + ++ E + +++ A
Sbjct: 268 AACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKA 307
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + IS+++ CA+L L +GR+VH L+ D +AL+ MY+KCG L A
Sbjct: 330 RPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKR 389
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++I+ WN+MI G +G E+A+ +F + G PD T+ ++ S G
Sbjct: 390 VFHTFE-PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTG 448
Query: 128 MRFEAFKLFEKM 139
E ++F M
Sbjct: 449 KVKEGREIFNSM 460
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 140/344 (40%), Gaps = 63/344 (18%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
T+L+ Y++ G L A +FQ++ RN +++ ++ G++ GR +A LF+ +
Sbjct: 116 TSLLRGYVRHGLLADAIRLFQQMP-ERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDR-- 172
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D W +M+SG+ Q G EA LF++M +V T+++S A + L ++
Sbjct: 173 --DVVAWTAMLSGYCQAGRITEARALFDEMPKRNVV----SWTAMISGYAQNGEVNLARK 226
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP---------------- 213
+ ++E TA++ Y++ G A F+ P
Sbjct: 227 ----LFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGM 282
Query: 214 -------------DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
D W+AMI Y +N A+ F M V+PN S +++L+
Sbjct: 283 VDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTV 342
Query: 261 CGHAGHVDKALQIFTMM------DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
C +D ++ M D F + ++ + + G LD+A+ +
Sbjct: 343 CAALAVLDYGREVHAAMLRCSFDMDVFAV-------SALITMYIKCGNLDKAKRVFHTFE 395
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMA-----MKLQEMEPENPT 353
+ +++S++ H LGE+ M+L M P+ T
Sbjct: 396 PKDIVMWNSMITGYAQH---GLGEQALGIFHDMRLAGMSPDGIT 436
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 215/375 (57%), Gaps = 34/375 (9%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-- 102
D TA+V +++ G L A +F+E+ +N ++WN MIAG + + + EKA ELF+
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 103 -------------GLAHEGF------------KPDPATWNSMISGFSQLGMRFEAFKLFE 137
G A G + D +W +MISG++Q G EA LF
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
KM+ G + + + LS+CA+++AL+LGK+ HG +++A AL++MY KCG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 198 QPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
A FD FE I D WN MI+GY R+G + A+ +F+ M+ +KP+ + V
Sbjct: 455 SIEEA---FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVG 510
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
VLSAC H G VDK ++ F M ++G+ +H+ CM+DLLGR+GRLDEA L++ +P
Sbjct: 511 VLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
P + + +LLGA H +++LGE+ A K+ EMEP+N +V+LSN+YA GRW +V +R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 376 QMINDRQLTKLPGIS 390
+ D+ + K+PG S
Sbjct: 631 SKMRDKGVKKVPGYS 645
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 39/297 (13%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
++ T+ A++ YL CA VF+++ R++++WN M++G + NG A LF
Sbjct: 87 RRRSTVTYNAMISGYLSNNKFDCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALF 145
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM------QSTGMVPS------LK 149
+ + D +WN+M+SGF+Q G EA K+F++M G++ + ++
Sbjct: 146 NQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIE 201
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLN-----------KDESMATALISMYMKCGQ 198
+ + D + G+V + L+ +D+ +I+ Y + G
Sbjct: 202 DARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGL 261
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
S ARR F++ I+ D W AM+SG+ +NG + A IF+ M ++ N S+ A++
Sbjct: 262 LSEARRLFEELPIR--DVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMI 315
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ + ++KA ++F M + MV + G +D+A+ L E+P+
Sbjct: 316 AGYVQSQQIEKARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 118/245 (48%), Gaps = 15/245 (6%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +S+CA + L+ G+Q+HG +K Q+ + G AL+ MY KCG + A +VF
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ ++I++WNTMIAG +G ++A+ LFE + KPD T ++S S G
Sbjct: 464 EDIT-EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFV 521
Query: 130 FEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDES 184
+ + F M Q+ G+ + K C+ +L L AL L K + D +
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY-------PDAA 574
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AL+ G + ++ FE++PD+ + + + Y +G + E+ M+
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 244 QEKVK 248
+ VK
Sbjct: 635 DKGVK 639
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V++ +++S A +++ R++ L + + L+ Y++ G + A
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARR 205
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F K I++WN ++ G + R + A LF+ + D +WN MI+G++Q G
Sbjct: 206 LFDS-KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNG 260
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LFE++ + V+ + A ++ +E K+E
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP--------EKNEVSWN 312
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I+ Y++ Q AR FDQ + + + WN M++GY + G + A +FD M Q
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKILFDEMPQR-- 368
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+ S+ A++S +G ++AL +F M D G+
Sbjct: 369 --DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 54/238 (22%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+I+ WN I+ M G+ E A+ +F G+ + T+N+MISG+ A K+F
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
EKM ++ ++S Y+K
Sbjct: 115 EKMPDRDLIS---------------------------------------WNVMLSGYVKN 135
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G S AR F+Q K D WNAM+SG+ +NG E A +IFD M + N S+
Sbjct: 136 GNLSAARALFNQMPEK--DVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNG 189
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+LSA G ++ A ++F D + + + C++ R RLD+AR L +P
Sbjct: 190 LLSAYVQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
I D WN IS Y R G+ ESA+ +F+ M+ + ++ ++ A++S D A
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCA 110
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGAC 328
++F M P ++ V L G ++G L AR L ++PE V ++++L
Sbjct: 111 RKVFEKM-------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSG- 162
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
+ EE +M +N + L + Y GR ED R+
Sbjct: 163 --FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRL 206
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 216/383 (56%), Gaps = 12/383 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S +SAC++L L+ G +++ + E + IG ALVDM+ KCGCL A VF +
Sbjct: 150 TIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVRIGNALVDMFCKCGCLDKARAVFDSM 208
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ +N+ W +M+ G + GR ++A LFE D W +M++G+ Q EA
Sbjct: 209 R-DKNVKCWTSMVFGYVSTGRIDEARVLFE----RSPVKDVVLWTAMMNGYVQFNRFDEA 263
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF MQ+ G+ P + S+L+ CA AL+ GK HG++ + D+ + TAL+ M
Sbjct: 264 LELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDM 323
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A F +EIK D A W ++I G NG A++++ M+ V+ ++
Sbjct: 324 YAKCGCIETALEVF--YEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAI 381
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FVAVL+AC H G V + +IF M + ++PK EH C++DLL R+G LDEA ELI +
Sbjct: 382 TFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDK 441
Query: 313 L----PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ E V VY SLL A + N + E +A KL+++E + + +L+++YA RW
Sbjct: 442 MRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRW 501
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
EDV +R+ + D + K PG S+
Sbjct: 502 EDVTNVRRKMKDLGIRKFPGCSS 524
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 150/347 (43%), Gaps = 68/347 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ + L + G +VHG +K + D+ + +L+ MY G + H V
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQLG 127
F E+ R++++WN +I+ + NGR E A+ +F+ ++ E K D T
Sbjct: 104 FDEMP-QRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT------------ 150
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S LSAC+ L L++G+ + V+ + +
Sbjct: 151 -----------------------IVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGN 186
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKP-DDPAF 218
AL+ M+ KCG AR FD FE P D
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W AM++GY + ++ A+E+F MQ ++P++ V++L+ C G +++ I ++
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + + +VD+ + G ++ A E+ E+ E + + SL+
Sbjct: 307 EN-RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLI 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 1/131 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +S+++ CA L+ G+ +HG + D ++GTALVDMY KCGC+ A V
Sbjct: 277 PDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEV 336
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+K R+ +W ++I G+ +NG S +A++L+ + + G + D T+ ++++ + G
Sbjct: 337 FYEIK-ERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGF 395
Query: 129 RFEAFKLFEKM 139
E K+F M
Sbjct: 396 VAEGRKIFHSM 406
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 5/216 (2%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P +N M+ + + LF +++ G+ P + VL + L + G++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG+ ++A L D ++ +L+ MY G+ + FD E+ D WN +IS Y NG
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFD--EMPQRDVVSWNGLISSYVGNG 126
Query: 231 EYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+E A+ +F M QE +K + + V+ LSAC +++ +I+ + +F + + +
Sbjct: 127 RFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN 186
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+VD+ + G LD+AR + + + V + S++
Sbjct: 187 --ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMV 220
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 223/424 (52%), Gaps = 49/424 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T ISV+ CA L G+ VH L +K + L+DMY KCG L A VF+++
Sbjct: 115 TIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKM 174
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA------------------ 114
G RN+++W +MIAG +G S+ A+ L + + EG K D
Sbjct: 175 -GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNG 233
Query: 115 -----------------TWNSMISGFSQLGMRFEAFKLFEKMQSTGMV----------PS 147
N+++ +++ G A +F M ++ P
Sbjct: 234 KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPD 293
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ + +L ACA LSAL+ GKE HG+++R + D +A AL+ +Y+KCG AR FD
Sbjct: 294 SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFD 353
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
I D W MI+GYG +G A+ F+ M+ ++P+ SF+++L AC H+G +
Sbjct: 354 M--IPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLL 411
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLG 326
++ + F +M +DF ++PK EH+ CMVDLL R+G L +A + I LP P +++ +LL
Sbjct: 412 EQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLC 471
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
C + + +L E++A ++ E+EPEN +V+L+NIYA +WE+V R+R+ I + L K
Sbjct: 472 GCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKN 531
Query: 387 PGIS 390
PG S
Sbjct: 532 PGCS 535
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 32/297 (10%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNG------------------- 92
LV Y CG L VF ++ +N+ WN M++ G
Sbjct: 2 LVSFYATCGDLKEGRRVFDTME-KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60
Query: 93 -RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
RSE A ELF+ L D +WNSMISG+ G+ ++++M G+ L +
Sbjct: 61 KRSESASELFDKLCDR----DVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATI 116
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVL CA L LGK H I++ + + + L+ MY KCG A R F++ +
Sbjct: 117 ISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEK--M 174
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ W +MI+GY R+G + A+ + M++E VK + + ++L AC +G +D
Sbjct: 175 GERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 234
Query: 272 QIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ + + F C ++D+ + G ++ A + + + +++++G
Sbjct: 235 DVHDYIKAN---NMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVG 288
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 163/348 (46%), Gaps = 31/348 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T ++ ACASL L+ G+++HG L+ SD + ALVD+Y+KCG L A
Sbjct: 291 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 350
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ S+++++W MIAG ++G +A+ F + G +PD ++ S++ S G
Sbjct: 351 LF-DMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSG 409
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + ++ F M++ + P L+ C+ +LS +LS + + + + D
Sbjct: 410 LLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLS------KAYKFIETLPIAPDA 463
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ AL+ A + ++ FE++P++ ++ + + Y ++E + + +
Sbjct: 464 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Query: 243 QQEKVKPN-SASFVAVL-----------SACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
++ ++ N S++ + S+ H+ ++ L+ + G PK ++
Sbjct: 524 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 583
Query: 291 GCMVD-------LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
D L G S +L A L+ P T+ V +L CH
Sbjct: 584 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCH 631
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 50/261 (19%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V S++ ACA L G+ VH S+ + AL+DMY KCG + A++VF
Sbjct: 215 VAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFST 274
Query: 72 LKGSRNILTWNTMIAGMMLNGRS--------------EKAMELFEGLAHEGFKPDP---- 113
+ ++I++WNTM+ + + R+ E+ E+ + G+ D
Sbjct: 275 MV-VKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 333
Query: 114 ---------------------------ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
+W MI+G+ G EA F +M+ G+ P
Sbjct: 334 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 393
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA--TALISMYMKCGQPSWARR 204
S+L AC+ L+ G ++++ D N + + ++ + + G S A +
Sbjct: 394 DEVSFISILYACSHSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYK 452
Query: 205 FFDQFEIKPDDPAFWNAMISG 225
F + I P D W A++ G
Sbjct: 453 FIETLPIAP-DATIWGALLCG 472
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 209/383 (54%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +++ ACA L+ G+ VH + + QSD + AL+DMY KCG + AH+V
Sbjct: 350 PDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSV 409
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E++ D +WN+MI G+S+ +
Sbjct: 410 FSEMQ------------------------------------VKDIVSWNTMIGGYSKNSL 433
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ P+ + +L ACA L+AL+ G+E HGH++R + D +A A
Sbjct: 434 PNEALNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANA 492
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY+KCG AR FD I D W MI+GYG +G A+ F+ M+ ++
Sbjct: 493 LVDMYLKCGALGLARLLFDM--IPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF+++L AC H+G +D+ F MM ++ ++PK EH+ C+VDLL R+G L +A +
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP +++ +LL C + + L E++A + E+EPEN +V+L+NIYA +
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE+V ++R+ I R L K PG S
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCS 693
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 163/331 (49%), Gaps = 22/331 (6%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ SV+ CA L +Q GR++H + + + D ++G+ LV MY+ CG L +F ++
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--------------DPATWNS 118
+ + WN ++ G G +++ LF+ + G + D +WNS
Sbjct: 163 ANEK-VFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNS 221
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MISG+ G+ + LFE+M G+ L + SV++ C++ L LG+ HG+ I+A
Sbjct: 222 MISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKAS 281
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
K+ ++ L+ MY K G + A + F+ + W +MI+GY R G + +V +
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFET--MGERSVVSWTSMIAGYAREGLSDMSVRL 339
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDL 296
F M++E + P+ + +L AC G ++ + + ++ K + + F ++D+
Sbjct: 340 FHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKEN---KMQSDLFVSNALMDM 396
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ G + +A + E+ + +++++G
Sbjct: 397 YAKCGSMGDAHSVFSEMQVKDIVSWNTMIGG 427
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 45/353 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +SV++ C++ L GR +HG +K + + L+DMY K G L A VF+ +
Sbjct: 253 TMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETM 312
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
G R++++ W SMI+G+++ G+ +
Sbjct: 313 -GERSVVS-----------------------------------WTSMIAGYAREGLSDMS 336
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +M+ G+ P + +T++L ACA L+ GK+ H ++ + D ++ AL+ M
Sbjct: 337 VRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDM 396
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A F + ++K D WN MI GY +N A+ +F MQ KPNS
Sbjct: 397 YAKCGSMGDAHSVFSEMQVK--DIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSI 453
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ +L AC +++ +I + + G + +VD+ + G L AR L
Sbjct: 454 TMACILPACASLAALERGQEIHGHILRN-GFSLDRHVANALVDMYLKCGALGLARLLFDM 512
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIYA 363
+PE + + ++ H G E EM P +S +YA
Sbjct: 513 IPEKDLVSWTVMIAGYGMH---GYGSEAIAAFNEMRNSGIEPDEVSFISILYA 562
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 124/250 (49%), Gaps = 12/250 (4%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+ +PNS+T ++ ACASL L+ G+++HG L+ D + ALVDMYLKCG L A
Sbjct: 447 NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 506
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F ++ +++++W MIAG ++G +A+ F + + G +PD ++ S++ S
Sbjct: 507 RLLF-DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 565
Query: 126 LGMRFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ E + F M++ + C+ +L+ +LS + + + +
Sbjct: 566 SGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLS------KAYKFIKMMPIEP 619
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ AL+ A + + FE++P++ ++ + + Y ++E ++ +
Sbjct: 620 DATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRE 679
Query: 241 LMQQEKVKPN 250
+ + ++ N
Sbjct: 680 RIGRRGLRKN 689
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 59/299 (19%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N I F +LG A +L QS L+ SVL CADL +++ G+ H +
Sbjct: 71 YNIEICRFCELGNLRRAMELIN--QSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQ 128
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQF-------------------------- 209
D+ D + + L+ MY+ CG RR FD+
Sbjct: 129 SNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLS 188
Query: 210 ---------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
E+ D WN+MISGY NG E +++F+ M +
Sbjct: 189 LFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGIN 248
Query: 249 PNSASFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ A+ V+V++ C + G + +AL + + FG + + C++D+ +SG L+ A
Sbjct: 249 TDLATMVSVVAGCSNTGMLLLGRALHGYA-IKASFGKELTLNN--CLLDMYSKSGNLNSA 305
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP--FVILSNIYA 363
++ + E +V + S++ + L + EME E +P F I + ++A
Sbjct: 306 IQVFETMGERSVVSWTSMIAG---YAREGLSDMSVRLFHEMEKEGISPDIFTITTILHA 361
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 218/385 (56%), Gaps = 10/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF S+ +C L G+Q+H + K+ SD I L++MY CGCL A
Sbjct: 75 DPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARK 131
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++++++W TMI +A++LF + + WN MI+G +
Sbjct: 132 VFDKMV-NKSVVSWATMIGAYAQWDLPHEAIKLFRRME---IASNLFCWNIMINGHVEDS 187
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ +G+ + S+L AC L AL+LGK H ++ + + D ++ T
Sbjct: 188 DYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGT 247
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A R F E+ D W A+I G G+ A+E+F MQ +V
Sbjct: 248 ALVDMYAKCGSIESAMRVFQ--EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEV 305
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP++ +FV VL+AC HAG V++ + F M + +G++P EH+GCMVD+LGR+GR+ EA
Sbjct: 306 KPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAE 365
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P P V LL AC H N + E A +L E++P+N +V+LSNIY+ +
Sbjct: 366 DLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMK 425
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
WE ++R+++ +R + K PG SA
Sbjct: 426 NWEAAKKMRELMVERNIKKPPGCSA 450
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 205/384 (53%), Gaps = 41/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VT SV+SACA L GR VH L +K+ + D ALVDMY KC + A V
Sbjct: 337 PNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYV 395
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + F D WNS+ISG++Q G
Sbjct: 396 FETV------------------------------------FDKDVIAWNSIISGYTQNGY 419
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDESMAT 187
+EA +LF++M+S + P + SVLSACA + A ++G HG+ I+A L + + T
Sbjct: 420 AYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGT 479
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++ Y KCG AR FD E+ + W+AMI GYG G+ ++E+F M +EK+
Sbjct: 480 ALLNFYAKCGDAESARVIFD--EMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKL 537
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN F +LSAC H+G + + + F M + P +H+ CMVDLL R+GRL+EA
Sbjct: 538 EPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEAL 597
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I ++P +P VS+ + L C H DLGE ++ E+ P+ +V++SN+YA G
Sbjct: 598 DFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEG 657
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW ++ +++ R L KLPG S
Sbjct: 658 RWSQANQVMELMKQRGLAKLPGWS 681
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 153/330 (46%), Gaps = 46/330 (13%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E L E N T S+++AC L L G+ VHG +K ++ + T L+D+Y KCG
Sbjct: 229 MREGLV-EGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCG 287
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A +VF EL + ++++W MI G G +A++LF + P+ T
Sbjct: 288 DIRDAFSVFDELS-TIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVT----- 341
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+SVLSACA +L +G+ H I+ +
Sbjct: 342 ------------------------------TSSVLSACAQTGSLNMGRSVHCLGIKLG-S 370
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + AL+ MY KC AR F+ + D WN++ISGY +NG A+E+FD
Sbjct: 371 EDATFENALVDMYAKCHMIGDARYVFET--VFDKDVIAWNSIISGYTQNGYAYEALELFD 428
Query: 241 LMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFG-CMVDLL 297
M+ + V P++ + V+VLSAC G V +L + + GL + G +++
Sbjct: 429 QMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAI---KAGLLSGSVYVGTALLNFY 485
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ G + AR + E+ E + +++G
Sbjct: 486 AKCGDAESARVIFDEMGEKNTITWSAMIGG 515
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 150/328 (45%), Gaps = 48/328 (14%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+++CL +E ++V F V+ AC+ L GR++H +K+ D+ + T LVDMY KC
Sbjct: 129 LRKCL-NEYDNVVFSIVLKACSELRETDEGRKLHCQIVKV-GSPDSFVLTGLVDMYAKCR 186
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ + VF E+ RN++ W SMI
Sbjct: 187 EVEDSRRVFDEIL-DRNVVCWT-----------------------------------SMI 210
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q E LF +M+ + + + S+++AC L AL GK HG+VI++ +
Sbjct: 211 VGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFD 270
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + T L+ +Y KCG A FD E+ D W AMI GY + G A+++F
Sbjct: 271 LNSFLVTPLLDLYFKCGDIRDAFSVFD--ELSTIDLVSWTAMIVGYAQRGYPREALKLFT 328
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLL 297
+ + + PN+ + +VLSAC G ++ + + G+K E +VD+
Sbjct: 329 DERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCL-----GIKLGSEDATFENALVDMY 383
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + +AR + + + V ++S++
Sbjct: 384 AKCHMIGDARYVFETVFDKDVIAWNSII 411
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L C +S+L+ + H ++ L++D T L+S+Y G AR FD+ I+
Sbjct: 44 SLLGICKTVSSLR---KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDR--IR 98
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-NSASFVAVLSACGHAGHVDKAL 271
D W MI Y N Y V+ ++ ++ + ++ F VL AC D+
Sbjct: 99 NPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGR 158
Query: 272 QIFTMM-----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + D F L +VD+ + ++++R + E+ + V + S++
Sbjct: 159 KLHCQIVKVGSPDSFVLTG-------LVDMYAKCREVEDSRRVFDEILDRNVVCWTSMI 210
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 211/401 (52%), Gaps = 55/401 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK------------IEKQSDTMIGTALVDM 55
EPNSVT IS++SACASL L G + H +LK D ++ AL+DM
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDM 451
Query: 56 YLKCGCLPCAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
Y KC A +F + + RN++TW
Sbjct: 452 YSKCRSFKAARTIFNSIPRRERNVVTWTV------------------------------- 480
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHG 172
MI G++Q G +A KLF +M S + P+ ++ +L ACA LS+L++GK+ H
Sbjct: 481 ----MIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHA 536
Query: 173 HVIRADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
+V R + +A LI MY KCG AR FD + + W +M+SGYG +G
Sbjct: 537 YVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR--NEVSWTSMMSGYGMHG 594
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A++IFD MQ+ P+ SF+ +L AC H+G VD+ L F +M D+G+ +H+
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHY 654
Query: 291 GCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
C++DLL RSGRLD+A + I+E+P EP+ +++ +LL AC H N +L E KL M+
Sbjct: 655 ACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKA 714
Query: 350 ENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
EN + ++SNIYA RW+DV RIRQ++ + K PG S
Sbjct: 715 ENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCS 755
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 179/370 (48%), Gaps = 18/370 (4%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ ACASL L +++H ++ +D + AL+D Y KCG + A
Sbjct: 254 NERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDA 313
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
NVF ++ +++++WN M+ G +G+ A ELF+ + E D TW+++I+G++Q
Sbjct: 314 VNVFNVME-FKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQ 372
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA F++M G P+ + S+LSACA L AL G ETH + ++ L
Sbjct: 373 RGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDND 432
Query: 180 ------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+D + ALI MY KC AR F+ + + W MI GY + G+
Sbjct: 433 FGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 234 SAVEIFDLM--QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
A+++F M + V PN+ + +L AC H + QI + +
Sbjct: 493 DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVA 552
Query: 292 -CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--ME 348
C++D+ + G +D AR + +P+ + S++ H ++ K+Q+
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFV 612
Query: 349 PENPTPFVIL 358
P++ + V+L
Sbjct: 613 PDDISFLVLL 622
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 39/275 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T + AC L + G HGL +S+ + ALV MY + G L A
Sbjct: 146 KPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASL 205
Query: 68 VFQEL--KGSRNILTWNTMIAGMMLNGRSEKAMELFE---GLAHEGFKPDPATWNSMISG 122
VF E+ KG ++++WN+++A + A++LF + HE
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHE--------------- 250
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++T + + ++L ACA L AL KE H + IR D
Sbjct: 251 -----------------KATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFAD 293
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ ALI Y KCG A F+ E K D WNAM++GY ++G++ +A E+F M
Sbjct: 294 AFVCNALIDTYAKCGSMKDAVNVFNVMEFK--DVVSWNAMVTGYTQSGKFGAAFELFKNM 351
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
++E + + ++ AV++ G+ +AL F M
Sbjct: 352 RKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 22/235 (9%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-NSMISGFSQLGMRFEAFKLFEKMQST 142
++A + G + A+ + E + P PA W N ++ + G A + +M
Sbjct: 89 VVASYLACGATSDALSVLERVV-----PSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P + L AC +L + + G HG + + + AL++MY + G A
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203
Query: 203 RRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQ---QEKV---KPNSASFV 255
FD+ K DD WN++++ + + +A+++F M EK + + S V
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263
Query: 256 AVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEA 306
+L AC + + +I + + + F + F C ++D + G + +A
Sbjct: 264 NILPACASLKALPQTKEIHSYAIRNGTFA-----DAFVCNALIDTYAKCGSMKDA 313
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 10/186 (5%)
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+S+ T +++ Y+ CG S A ++ + P +WN ++ + G + A+ + M
Sbjct: 83 KSLGTGVVASYLACGATSDALSVLER--VVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRM 140
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ KP+ + L ACG ++ + G + +V + RSG
Sbjct: 141 LRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCN-GFESNVFVCNALVAMYSRSGS 199
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNS-------DLGEEMAMKLQEMEPENPTPF 355
L++A + E+ + S H+ DL EM + E +
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259
Query: 356 VILSNI 361
+ + NI
Sbjct: 260 ISIVNI 265
>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Glycine max]
Length = 548
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 229/419 (54%), Gaps = 39/419 (9%)
Query: 9 PNSVTFI-SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN V I SV+ AC + G ++HG LK + D+ + ++L+ MY KC + A
Sbjct: 127 PNYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARK 186
Query: 68 VFQ---------------------------------ELKGSR-NILTWNTMIAGMMLNGR 93
VF +L G + N++TWN++I+G G
Sbjct: 187 VFDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGD 246
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
+ E+F + +G +PD +W S+ISGF Q EAF F++M S G P+ +++
Sbjct: 247 QGRVSEIFRLMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISA 306
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L ACA + + +G+E HG+ + + D + +AL+ MY KCG S AR F + K
Sbjct: 307 LLPACATAARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEK- 365
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV-KPNSASFVAVLSACGHAGHVDKALQ 272
+ WN++I G+ +G E A+E+F+ M++E V K + +F A L+AC H G + +
Sbjct: 366 -NTVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQR 424
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F +M + + ++P+ EH+ CMVDLLGR+G+L EA +I+ +P EP + V+ +LL AC H
Sbjct: 425 LFKIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGALLAACRNH 484
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ +L E AM L E+EPE+ ++LS++YA G+W R+++ I +L KL G+S
Sbjct: 485 RHVELAEVAAMHLMELEPESAANPLLLSSVYADAGKWGKFERVKKRIKKGKLRKLQGLS 543
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 140/298 (46%), Gaps = 16/298 (5%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKG---SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG 108
L+DMY + L + L +R + + +++ G+ A +LF+ +
Sbjct: 33 LIDMYARDRALHAGKKLHAHLVTNGFARFNVVASNLVSFYTCCGQLSHARKLFDKIPTTN 92
Query: 109 FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQST-GMVPS-LKCVTSVLSACADLSALKL 166
+ W ++I ++ G A +F +MQ+ G+ P+ + + SVL AC +
Sbjct: 93 VR----RWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRIT 148
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G++ HG +++ D ++++LI MY KC + AR+ FD +K D NA+++GY
Sbjct: 149 GEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVK--DTVALNAVVAGY 206
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G A+ + + M+ +KPN ++ +++S G + +IF +M D G++P
Sbjct: 207 VQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIAD-GVEPD 265
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEM 340
+ ++ ++ R EA + +++ PT + +LL AC +G E+
Sbjct: 266 VVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREI 323
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 226/385 (58%), Gaps = 8/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF+ V AC + L + G Q+ +KI +S+ + A++ MY G + A V
Sbjct: 30 PNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRV 89
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++ +WN MI G + +G +A E+F+ ++ D +W ++I+G+ Q+G
Sbjct: 90 F-DWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSER----DVVSWTTIIAGYVQVGC 144
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M TG P+ + S L+ACA+L AL G+ H ++ ++++ +E + +
Sbjct: 145 FKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLAS 204
Query: 189 LISMYMKCGQPSWARRFF-DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG+ +A + F D++ +K WNAMI GY +G+ + A+++F+ M+ EKV
Sbjct: 205 LLDMYAKCGEIDFAAKVFHDEYGLKLKVWP-WNAMIGGYAMHGKSKEAIDLFEQMKVEKV 263
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +FVA+L+AC H V++ F M +G++P+ EH+GCMVDLLGRSG L EA
Sbjct: 264 SPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAE 323
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E + +P P +++ +LLGAC H + + G+ + ++E++ ++ V+L+N+Y+ G
Sbjct: 324 ETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASG 383
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W++ +RQ I K PG S+
Sbjct: 384 QWDEAKAVRQKIEVSGRKKTPGCSS 408
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 39/257 (15%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
++ +G +P+ V AC + + G++ H I+ L + + A+I MY G
Sbjct: 23 VRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGL 82
Query: 199 PSWARRFFDQF-----------------------------EIKPDDPAFWNAMISGYGRN 229
ARR FD E+ D W +I+GY +
Sbjct: 83 VDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQV 142
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G ++ A+++F M Q PN + + L+AC + +D+ I +D +K +
Sbjct: 143 GCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKS-EIKMNERL 201
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSV--YHSLLGACWCHLNS----DLGEEMAMK 343
++D+ + G +D A ++ + + V +++++G H S DL E+ MK
Sbjct: 202 LASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ--MK 259
Query: 344 LQEMEPENPTPFVILSN 360
++++ P N FV L N
Sbjct: 260 VEKVSP-NKVTFVALLN 275
>gi|91805879|gb|ABE65668.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 217/363 (59%), Gaps = 10/363 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH +K + + D ++ TALVD Y+K G L A VF+ +K N++ +MI+G M
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMN 218
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLK 149
G E A E+F + D +N+M+ GFS+ G + + ++ MQ G P++
Sbjct: 219 QGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ ACA L++ ++G++ H ++++ + M ++L+ MY KCG + ARR FDQ
Sbjct: 275 TFASVIGACAVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K + W +MI GYG+NG E A+E+F M++ +++PN +F+ LSAC H+G VDK
Sbjct: 335 QEK--NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGAC 328
+IF M D+ +KPK EH+ C+VDL+GR+G L++A E R +PE P ++ +LL +C
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 329 WCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
H N +L A +L ++ + P ++ LSN+YA +W++V +IR+++ R+++K
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 388 GIS 390
G S
Sbjct: 513 GRS 515
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K Q D I L+ ++LKCGCL A VF EL + +N MI+G +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKP-TLSAYNYMISGYL 111
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G ++ + L + +++ G K D T + ++ + G ST ++P
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG-------------STMILPRSL 158
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C + H +I+ D+ D+ + TAL+ Y+K G+ AR F+
Sbjct: 159 C-----------------RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 210 E-----------------------------IKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ K D +NAM+ G+ R+GE + +V+++
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+ PN ++F +V+ AC + Q+ + G+ + ++D+ +
Sbjct: 262 ISMQRAGFHPNISTFASVIGACAVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAK 320
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
G +++AR + ++ E V + S++ + N + E+ +++E E
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 15/246 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SVI ACA L + G+QVH +K + +G++L+DMY KCG + A V
Sbjct: 271 PNISTFASVIGACAVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ +N+ +W +MI G NG E+A+ELF + +P+ T+ +S S G+
Sbjct: 331 FDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ +++FE MQ M P ++ C+ ++ DL+ A + + D
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER-------PDS 442
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDD-PAFWNAMISGYGRNGEYESAVEIFDL 241
+ AL+S G A + F++ D P + A+ + Y N ++++ +I ++
Sbjct: 443 DIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREV 502
Query: 242 MQQEKV 247
M++ ++
Sbjct: 503 MKRRRI 508
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ F Q+ + K + L + A K GK+ H +I+ D +++ L+ +
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 78
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG S+AR+ FD+ KP A+ N MISGY ++G + + + M K +
Sbjct: 79 HLKCGCLSYARQVFDELP-KPTLSAY-NYMISGYLKHGLVKELLLLVQRMSYSGEKADGY 136
Query: 253 SFVAVLSACGHAGHV------------DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ VL A G + ++ +DD +VD +S
Sbjct: 137 TLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL--------ITALVDTYVKS 188
Query: 301 GRLDEARELIRELPEPTV 318
G+L+ AR + + + V
Sbjct: 189 GKLESARTVFETMKDENV 206
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 220/380 (57%), Gaps = 11/380 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN F SV+SACA+L L+ G ++H LK+ S + ++L+DMY KC A
Sbjct: 381 RPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQR 440
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L +N + WN++I+G NG+ +A ELF+ + + A+WN+MISG+++
Sbjct: 441 IFNSLP-EKNTVCWNSLISGYSWNGKMVEAEELFKKMPAR----NAASWNTMISGYAE-N 494
Query: 128 MRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
RF +A F M ++G +P ++SVL ACA+L +L++GK H +++ + + M
Sbjct: 495 RRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMG 554
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL MY K G +RR F +++ + W AM+ G NG E ++ +F+ M +
Sbjct: 555 TALSDMYAKSGDLDSSRRMF--YQMPEKNNITWTAMVQGLAENGFAEESILLFENMIANR 612
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ PN +F+A+L AC H G V++A+ F M G+ PK +H+ CMVD+L R+GRL EA
Sbjct: 613 IAPNEHTFLAILFACSHCGLVEQAIHYFETM-QAHGIPPKDKHYTCMVDVLARAGRLPEA 671
Query: 307 RELIRELPEP-TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
EL+ ++P S + SLL AC + N ++GE A KL E+E +N +V+LSN+YA
Sbjct: 672 EELLMKVPSKLDTSSWSSLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASC 731
Query: 366 GRWEDVGRIRQMINDRQLTK 385
G+W+D R ++ +L K
Sbjct: 732 GKWKDAAETRILMQGPRLKK 751
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 152/342 (44%), Gaps = 40/342 (11%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCL 62
S PN VT I VI AC V GL +K EK + + +L+ +YL+ G
Sbjct: 246 SVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKSIE--VHNSLITLYLRMGDA 303
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
AH VF +++ R++++W ++ G E A + + + + +W+++I+
Sbjct: 304 AAAHRVFDDME-VRDVVSWTALLDVYAELGDLEGARRVLDAMPER----NEVSWSTLIAR 358
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
Q G EA KL+ +M + G P++ C +SVLSACA L L+ G H + ++ +
Sbjct: 359 HEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRGGTRIHANALKMGFSSS 418
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIKP 213
++++LI MY KC Q + A+R F+ ++
Sbjct: 419 LFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSWNGKMVEAEELFKKMPA 478
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ A WN MISGY N + A+ F M P + +VL AC + ++ +
Sbjct: 479 RNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLLACANLCSLEMGKMV 538
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ G++ + D+ +SG LD +R + ++PE
Sbjct: 539 HAEI-VKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPE 579
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 131/311 (42%), Gaps = 41/311 (13%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V ++K G + A +F + ++++++ TM+ +M G + A++L+E
Sbjct: 160 MVSEHVKAGDIASARRLFDGMP-EKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSV-- 216
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
A + +MI+GF + + +AF +F KM + P++ + V+ AC L
Sbjct: 217 --AFFTAMIAGFVRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLAMGVV 274
Query: 172 GHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G I+ +L K + +LI++Y++ G + A R FD E++ D W A++ Y G
Sbjct: 275 GLAIKWNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVR--DVVSWTALLDVYAELG 332
Query: 231 EYESAVEIFDLMQQ-------------------------------EKVKPNSASFVAVLS 259
+ E A + D M + E +PN + F +VLS
Sbjct: 333 DLEGARRVLDAMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLS 392
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
AC + +I G ++D+ + + +A+ + LPE
Sbjct: 393 ACATLHDLRGGTRIHANA-LKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTV 451
Query: 320 VYHSLL-GACW 329
++SL+ G W
Sbjct: 452 CWNSLISGYSW 462
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T ++ MK G A + +++ + AF+ AMI+G+ RN ++ A +F M +
Sbjct: 189 TTMVDALMKRGSVKDAVKLYERCPLY--SVAFFTAMIAGFVRNELHKDAFPVFRKMLRCS 246
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN + + V+ AC AG D A+ + GL K F
Sbjct: 247 VRPNVVTLICVIKACVGAGEFDLAMGVV-------GLAIKWNLF---------------- 283
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK--LQEMEPENPTPFVILSNIYAG 364
E ++ V++SL+ L +G+ A +ME + + L ++YA
Sbjct: 284 --------EKSIEVHNSLIT-----LYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAE 330
Query: 365 LGRWEDVGRIRQMINDRQ 382
LG E R+ + +R
Sbjct: 331 LGDLEGARRVLDAMPERN 348
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/411 (35%), Positives = 222/411 (54%), Gaps = 32/411 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF SV+ ACA L + G++VH K +S+ + +LVD+Y K GC A +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKL 184
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-----------------------A 105
F E+ R++++WNT+I+G +G +KA +F+G+ A
Sbjct: 185 FDEMV-VRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEA 243
Query: 106 HEGFKPDP----ATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACAD 160
+ F+ P +WN+MI+G++Q +A +LF +MQ G + P+ + SVLSACA
Sbjct: 244 RQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAH 303
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
L AL LGK H + R + + AL MY KCG A+ F E+ D W+
Sbjct: 304 LGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVF--HEMHERDVISWS 361
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
+I G G A F M ++ ++PN SF+ +L+AC HAG VDK L+ F MM
Sbjct: 362 IIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQV 421
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEE 339
+G+ PK EH+GC+VDLL R+GRLD+A LI +P +P V V+ +LLG C + +++ GE
Sbjct: 422 YGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGER 481
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++ E++ + V L+N+YA +GR +D R + D + K PG S
Sbjct: 482 VVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCS 532
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 13/96 (13%)
Query: 8 EPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
EPN ++F+ +++AC L Y QV+G+T KIE +VD+ + G
Sbjct: 389 EPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYG------CVVDLLSRAG 442
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEK 96
L A ++ + N++ W ++ G + +E+
Sbjct: 443 RLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAER 478
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/392 (34%), Positives = 219/392 (55%), Gaps = 14/392 (3%)
Query: 2 KECLSDEP--NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
+E + P N V + S+IS A + R++ ++ + + TA++ Y +
Sbjct: 191 REIFDEMPQRNVVAWTSMISGYAMNNKVDVARKL----FEVMPDKNEVTWTAMLKGYTRS 246
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G + A +F+ + + + N MI G LNG KA +F+ + + D TW+++
Sbjct: 247 GRINEAAELFKAMP-VKPVAACNGMIMGFGLNGEVGKARWVFDQMKEK----DDGTWSAL 301
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
I + + G EA LF MQ G+ P+ + S+LS C L++L G++ H ++R+
Sbjct: 302 IKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHF 361
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ D +++ LI+MY+KCG +R FD+F K D WN++I+GY ++G E A+E+F
Sbjct: 362 DLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSK--DIVMWNSIIAGYAQHGFGEKALEVF 419
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M P+ +F+ VLSACG+ G V + L+IF M + + K EH+ CMVDLLGR
Sbjct: 420 HEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGR 479
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+G+L+EA LI +P E V+ +LL AC H N DL E A KL ++EP + P+++L
Sbjct: 480 AGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILL 539
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SN+YA RW+DV +R+ + R ++K PG S
Sbjct: 540 SNLYASQSRWKDVAELRKTMRARNVSKSPGCS 571
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 31/325 (9%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
S I + + + G + A N+F +L+ S+ + +WN ++AG N R +A +LF+
Sbjct: 14 SSAAITQCQISYFARLGQIDRARNIFDDLQ-SKTVTSWNAIVAGYFHNKRPAEAQKLFDK 72
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS-VLSACADLS 162
+ + +WN ++SG+ + GM EA K+F+KM +V V V D +
Sbjct: 73 MPER----NTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEA 128
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L + +V+ T ++ ++ G+ ARR FD +K D M
Sbjct: 129 ELLFWRMPEKNVVS---------WTVMLGGLIEDGRVDEARRLFDMIPVK--DVVASTNM 177
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I G G A EIFD M Q N ++ +++S VD A ++F +M D
Sbjct: 178 IGGLCSEGRLSEAREIFDEMPQR----NVVAWTSMISGYAMNNKVDVARKLFEVMPD--- 230
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ + M+ RSGR++EA EL + +P +P + ++G LN ++G+
Sbjct: 231 --KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMG---FGLNGEVGKARW 285
Query: 342 MKLQEMEPENPTPFVILSNIYAGLG 366
+ +M+ ++ + L IY G
Sbjct: 286 V-FDQMKEKDDGTWSALIKIYERKG 309
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 28/262 (10%)
Query: 109 FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
F A IS F++LG A +F+ +QS K VTS + A K
Sbjct: 12 FSSSAAITQCQISYFARLGQIDRARNIFDDLQS-------KTVTSWNAIVAGYFHNKRPA 64
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E + ++ L+S Y+K G S AR+ FD+ + + W +M+ GY +
Sbjct: 65 EAQ-KLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDK--MPERNVVSWTSMVRGYVQ 121
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G + A +F M ++ N S+ +L G VD+A ++F M+ P ++
Sbjct: 122 EGLIDEAELLFWRMPEK----NVVSWTVMLGGLIEDGRVDEARRLFDMI-------PVKD 170
Query: 289 HFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
M+ L GRL EARE+ E+P+ V + S++ +N+ + ++A KL E
Sbjct: 171 VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISG--YAMNNKV--DVARKLFE 226
Query: 347 MEPE-NPTPFVILSNIYAGLGR 367
+ P+ N + + Y GR
Sbjct: 227 VMPDKNEVTWTAMLKGYTRSGR 248
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 214/384 (55%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT +S I+ACA L L G+ H + + I A++DMY+KCG A V
Sbjct: 322 PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKV 381
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ ++TWN++IAG++ +G E A+ +F + + + +WN+MI Q M
Sbjct: 382 FDSM-SNKTVVTWNSLIAGLVRDGELELALRIFGEMP----ESNLVSWNTMIGAMVQASM 436
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA L +MQ+ G+ + + SAC L AL L K + ++ + D++ D + TA
Sbjct: 437 FEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTA 496
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ M+ +CG P A R F+ E + D + W A I G + A+E+FD M ++ VK
Sbjct: 497 LVDMFSRCGDPLNAMRVFENMEKR--DVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVK 554
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ FVA+L+A H G+VD+ Q+F M+ G+ P+ H+GCMVDLLGR+G L+EA +
Sbjct: 555 ADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFD 614
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++ +P +P ++ S L AC H N + K+ ++ PE V+LSNIYA G+
Sbjct: 615 LMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASAGK 674
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W DV R+R + ++ K+ G S+
Sbjct: 675 WNDVARVRLQMKEKGFQKVAGSSS 698
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 70/345 (20%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT + ISACA L L+ G++V L ++ +S+T++ AL+DMY+KCG +
Sbjct: 220 EPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVRE 279
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E +N++ +NT+++ + +G + + + + + + +G +PD T
Sbjct: 280 IFDEF-SDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVT------------ 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M ST ++ACA L L +GK +H +V R L + ++++
Sbjct: 327 -----------MLST------------IAACAQLGDLSVGKSSHAYVFRNGLERLDNISN 363
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-------- 239
A+I MYMKCG+ A + FD K WN++I+G R+GE E A+ IF
Sbjct: 364 AIIDMYMKCGKREAACKVFDSMSNKT--VVTWNSLIAGLVRDGELELALRIFGEMPESNL 421
Query: 240 --------------------DL---MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
DL MQ + +K + + V + SACG+ G +D A I+T
Sbjct: 422 VSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTY 481
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
++ + + + +VD+ R G A + + + VS +
Sbjct: 482 IEKN-DIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAW 525
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 157/345 (45%), Gaps = 47/345 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF ++SAC+ ++ G QVHG+ +K+ D + +L+ Y CG + V
Sbjct: 120 PDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKV 179
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W S+I+G+S + M
Sbjct: 180 FDEML-ERNVVSWT-----------------------------------SLINGYSVVNM 203
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M G+ P+ + +SACA L L+LGK+ + + + + A
Sbjct: 204 AKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNA 263
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MYMKCG R FD+F K + +N ++S Y ++G + + D M Q+ +
Sbjct: 264 LLDMYMKCGDMYAVREIFDEFSDK--NLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQR 321
Query: 249 PNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ + ++ ++AC G V K+ + + GL+ ++D+ + G+ + A
Sbjct: 322 PDKVTMLSTIAACAQLGDLSVGKSSHAYVFRN---GLERLDNISNAIIDMYMKCGKREAA 378
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
++ + TV ++SL+ L D E+A+++ PE+
Sbjct: 379 CKVFDSMSNKTVVTWNSLIAG----LVRDGELELALRIFGEMPES 419
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 139/294 (47%), Gaps = 14/294 (4%)
Query: 76 RNILTWNTMIAGMMLNGRSEK---AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ + N +IA + G E A+ F+ EG K T N++I G++ G+ EA
Sbjct: 48 KGVFNINKLIAACVQMGTHESLNYALNAFK--EDEGTKCSLYTCNTLIRGYAASGLCKEA 105
Query: 133 FKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
++ M G+VP +LSAC+ + A G + HG V++ L KD +A +LI
Sbjct: 106 IFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIH 165
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y CG+ R+ FD E+ + W ++I+GY + AV +F M + V+PN
Sbjct: 166 FYAACGKVDLGRKVFD--EMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNP 223
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ V +SAC ++ ++ +M + G+K ++D+ + G + RE+
Sbjct: 224 VTMVCAISACAKLKDLELGKKVCNLM-TELGVKSNTLVVNALLDMYMKCGDMYAVREIFD 282
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNIYA 363
E + + +Y++++ ++ L E+ + L EM + + P +LS I A
Sbjct: 283 EFSDKNLVMYNTIMSN---YVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAA 333
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 207/398 (52%), Gaps = 53/398 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI----------EKQSDTMIGTALVDMYLK 58
PN VT ISV+SACASL G ++H +LK + D M+ AL+DMY K
Sbjct: 361 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420
Query: 59 CGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
C A ++F ++ RN++TW
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTV---------------------------------- 446
Query: 118 SMISGFSQLGMRFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
MI G +Q G +A KLF +M S G+ P+ ++ +L ACA L+A+++GK+ H +V+
Sbjct: 447 -MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 505
Query: 176 RADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
R + +A LI+MY KCG AR FD K W +M++GYG +G
Sbjct: 506 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK--SAISWTSMMTGYGMHGRGS 563
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A++IFD M++ P+ +F+ VL AC H G VD+ L F M D+GL P+ EH+
Sbjct: 564 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 623
Query: 294 VDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+DLL R GRLD+A + ++++P EPT V+ +LL AC H N +L E KL EM EN
Sbjct: 624 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 683
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++SNIYA GRW+DV RIR ++ + K PG S
Sbjct: 684 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 721
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 184/371 (49%), Gaps = 22/371 (5%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ AC SL + ++VHG ++ D +G AL+D Y KCG + A
Sbjct: 222 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENA 281
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN M+AG +G + A ELF+ + E D TW ++I+G+SQ
Sbjct: 282 VKVFNMME-FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 340
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA +F +M +G +P+ + SVLSACA L A G E H + ++ L
Sbjct: 341 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 400
Query: 180 ----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++D + ALI MY KC AR FD ++ + W MI G+ + G+ A
Sbjct: 401 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 460
Query: 236 VEIFDLMQQEK--VKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHF- 290
+++F M E V PN+ + +L AC H A + K + + + + +F
Sbjct: 461 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYD---SSAYFV 517
Query: 291 -GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--M 347
C++++ + G +D AR + + + + + S++ H ++ K+++
Sbjct: 518 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 577
Query: 348 EPENPTPFVIL 358
P++ T V+L
Sbjct: 578 VPDDITFLVVL 588
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 150/362 (41%), Gaps = 79/362 (21%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T V+ AC L + G HGL +S+ I ALV MY +CG L A +F E+
Sbjct: 119 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEI 178
Query: 73 --KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+G ++++WN++++ + + + A++LF +
Sbjct: 179 TQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT------------------------- 213
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
L + T + + ++L AC L A+ KE HG+ IR D + ALI
Sbjct: 214 ----LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALI 269
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-- 248
Y KCG A + F+ E K D WNAM++GY ++G +++A E+F M++E +
Sbjct: 270 DAYAKCGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLD 327
Query: 249 ---------------------------------PNSASFVAVLSACGHAGHVDKALQI-- 273
PN + ++VLSAC G + ++I
Sbjct: 328 MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHA 387
Query: 274 ------FTMMDDDFGLKPKQEH-FGCMVDLLGRSGRLDEARELIRELP--EPTVSVYHSL 324
+D+DFG + + + ++D+ + AR + ++P E V + +
Sbjct: 388 YSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVM 447
Query: 325 LG 326
+G
Sbjct: 448 IG 449
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 130/315 (41%), Gaps = 36/315 (11%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-NSMISGFSQLGMRFEAFKLFEKMQST 142
++A + G ++ A+ + E + P PA W N +I + G A + +M
Sbjct: 57 VVASYLACGATDYALLVLERVT-----PSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G + VL AC +L + + G HG + + + AL++MY +CG A
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171
Query: 203 RRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD---LMQQEKV---KPNSASFV 255
FD+ + DD WN+++S + ++ +A+++F L+ EK + + S V
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231
Query: 256 AVLSACGHAGHVDKALQIF-------TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+L ACG V + ++ T +D G ++D + G ++ A +
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG--------NALIDAYAKCGLMENAVK 283
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGR 367
+ + V +++++ N E+ + M EN P V + + AG +
Sbjct: 284 VFNMMEFKDVVSWNAMVAGYSQSGNFKAAFEL---FKNMRKENIPLDMVTWTAVIAGYSQ 340
Query: 368 ----WEDVGRIRQMI 378
E + RQMI
Sbjct: 341 RGCSHEALNVFRQMI 355
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 207/398 (52%), Gaps = 53/398 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI----------EKQSDTMIGTALVDMYLK 58
PN VT ISV+SACASL G ++H +LK + D M+ AL+DMY K
Sbjct: 254 PNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 313
Query: 59 CGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
C A ++F ++ RN++TW
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTV---------------------------------- 339
Query: 118 SMISGFSQLGMRFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
MI G +Q G +A KLF +M S G+ P+ ++ +L ACA L+A+++GK+ H +V+
Sbjct: 340 -MIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVL 398
Query: 176 RADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
R + +A LI+MY KCG AR FD K W +M++GYG +G
Sbjct: 399 RHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK--SAISWTSMMTGYGMHGRGS 456
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A++IFD M++ P+ +F+ VL AC H G VD+ L F M D+GL P+ EH+
Sbjct: 457 EALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYA 516
Query: 294 VDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+DLL R GRLD+A + ++++P EPT V+ +LL AC H N +L E KL EM EN
Sbjct: 517 IDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAEND 576
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++SNIYA GRW+DV RIR ++ + K PG S
Sbjct: 577 GSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCS 614
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 184/371 (49%), Gaps = 22/371 (5%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ AC SL + ++VHG ++ D +G AL+D Y KCG + A
Sbjct: 115 NERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENA 174
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN M+AG +G + A ELF+ + E D TW ++I+G+SQ
Sbjct: 175 VKVFNMME-FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 233
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA +F +M +G +P+ + SVLSACA L A G E H + ++ L
Sbjct: 234 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 293
Query: 180 ----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++D + ALI MY KC AR FD ++ + W MI G+ + G+ A
Sbjct: 294 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 353
Query: 236 VEIFDLMQQEK--VKPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHF- 290
+++F M E V PN+ + +L AC H A + K + + + + +F
Sbjct: 354 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQY---DSSAYFV 410
Query: 291 -GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--M 347
C++++ + G +D AR + + + + + S++ H ++ K+++
Sbjct: 411 ANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGF 470
Query: 348 EPENPTPFVIL 358
P++ T V+L
Sbjct: 471 VPDDITFLVVL 481
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 146/366 (39%), Gaps = 87/366 (23%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T V+ AC L + G HGL +S+ I ALV MY +CG L
Sbjct: 12 TLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSL---------- 61
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
E+A +F+ + G D +WNS++S + + A
Sbjct: 62 ----------------------EEASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTA 98
Query: 133 FKLFEKM------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
LF KM + T + + ++L AC L A+ KE HG+ IR D +
Sbjct: 99 LDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVG 158
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI Y KCG A + F+ E K D WNAM++GY ++G +++A E+F M++E
Sbjct: 159 NALIDAYAKCGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFKAAFELFKNMRKEN 216
Query: 247 VK-----------------------------------PNSASFVAVLSACGHAGHVDKAL 271
+ PN + ++VLSAC G + +
Sbjct: 217 IPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGM 276
Query: 272 QI--------FTMMDDDFGLKPKQEH-FGCMVDLLGRSGRLDEARELIRELP--EPTVSV 320
+I +D+DFG + + + ++D+ + AR + ++P E V
Sbjct: 277 EIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVT 336
Query: 321 YHSLLG 326
+ ++G
Sbjct: 337 WTVMIG 342
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 214/383 (55%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SV +SV+SAC+ + VHG +K +G L+D Y KCG
Sbjct: 1250 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG--------- 1300
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q L S+ + W ME + D +WNSMI+ ++Q G+
Sbjct: 1301 QPLV-SKKVFDW----------------ME----------EKDDISWNSMIAVYAQSGLS 1333
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F M + G+ + +++VL ACA AL+ GK H VI+ DL + + T+
Sbjct: 1334 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 1393
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KCG+ A++ FD+ +K + W AM++GYG +G + A++IF M + VK
Sbjct: 1394 IIDMYCKCGRVEMAKKTFDR--MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV+VL+AC HAG V++ F M + ++P EH+GCMVDL GR+G L+EA
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ + +P V+ SLLGAC H N DLGE A KL E++P+N +V+LSN+YA GR
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W DV R+R ++ +RQL K PG S
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFS 1594
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 168/311 (54%), Gaps = 9/311 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + TF VI AC + L + G+ VHG +K D + L+D Y KCG
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTR 177
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF++++ RN+++W T+I+G++ G ++A +F+ + + + +W +MI+G+
Sbjct: 178 FALKVFEKMR-VRNVVSWTTVISGLISCGDLQEARRIFDEIPSK----NVVSWTAMINGY 232
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ EA +LF++MQ+ + P+ + S++ AC ++ L LG+ H + I+ +
Sbjct: 233 IRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGV 292
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDP-AFWNAMISGYGRNGEYESAVEIFDLM 242
+ TALI MY KCG + + FE P WN+MI+ G +G + A+ +F M
Sbjct: 293 YLGTALIDMYSKCGS---IKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++ VKP++ +F+ VL AC H +V + FT M +G+ P EH+ CM +L RS
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNN 409
Query: 303 LDEARELIREL 313
LDEA + +E+
Sbjct: 410 LDEAFKSTKEV 420
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 56/336 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +F I +C++L L GR H ++D + +AL+DMY KCG L A +
Sbjct: 1140 PTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARAL 1199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W SMI+G+ Q
Sbjct: 1200 FDEIP-LRNVVSWT-----------------------------------SMITGYVQNEQ 1223
Query: 129 RFEAFKLFE-------KMQSTGMVPSLKCV-TSVLSACADLSALKLGKETHGHVIRADLN 180
A LF+ +++ VP V SVLSAC+ +S + + HG V++ +
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ L+ Y KCGQP +++ FD E K D WN+MI+ Y ++G A+E+F
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDIS--WNSMIAVYAQSGLSGEALEVFH 1341
Query: 241 -LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----MVD 295
+++ V+ N+ + AVL AC HAG AL+ + D +K E+ C ++D
Sbjct: 1342 GMVRHVGVRYNAVTLSAVLLACAHAG----ALRAGKCIHDQV-IKMDLEYNVCVGTSIID 1396
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ + GR++ A++ + E V + +++ H
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMH 1432
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 149/362 (41%), Gaps = 81/362 (22%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
RQ+H ++ +D ++ L+ +Y G + A +F +++ TWN +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP-CTFTWNLIIRANTI 102
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
NG SE+A+ L++ + +G D T+
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTF---------------------------------- 128
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP----------- 199
V+ AC + ++ LGK HG +I+ + D + LI Y KCG
Sbjct: 129 -PFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMR 187
Query: 200 -----SW---------------ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
SW ARR FD EI + W AMI+GY RN + E A+E+F
Sbjct: 188 VRNVVSWTTVISGLISCGDLQEARRIFD--EIPSKNVVSWTAMINGYIRNQQPEEALELF 245
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE---HFG-CMVD 295
MQ E + PN + V+++ AC G + I D+ +K E + G ++D
Sbjct: 246 KRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI-----HDYAIKNCIEIGVYLGTALID 300
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ + G + +A E+ +P ++ ++S++ + H LG+E EME N P
Sbjct: 301 MYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH---GLGQEALNLFSEMERVNVKPD 357
Query: 356 VI 357
I
Sbjct: 358 AI 359
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + +WNS+I+ ++ G EA + F ++ G++P+ + +C+ L L G+
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
+H D +++ALI MY KCGQ AR FD+ ++ + W +MI+GY +N
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLR--NVVSWTSMITGYVQN 1221
Query: 230 GEYESAVEIF-DLMQQE-------KVKPNSASFVAVLSAC 261
+ ++A+ +F D +++E V +S V+VLSAC
Sbjct: 1222 EQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSAC 1261
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFG-RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+PN +TF+SV++AC+ ++ G + + K + + +VD++ + GCL A+
Sbjct: 1451 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 1510
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
N+ + +K + + W +++ R K ++L E A + F+ DP
Sbjct: 1511 NLIKRMKMKPDFVVWGSLLGAC----RIHKNVDLGEIAAQKLFELDP 1553
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 22/134 (16%)
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+W ++ D+ + WN++I+ R G+ A+ F +++ + P +SF +
Sbjct: 1096 TWFYKYVDKSNVHS-----WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIK 1150
Query: 260 AC--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+C G H Q F FG + ++D+ + G+L +AR L
Sbjct: 1151 SCSALCDLVSGRMSH----QQAFV-----FGFETDLFVSSALIDMYSKCGQLKDARALFD 1201
Query: 312 ELPEPTVSVYHSLL 325
E+P V + S++
Sbjct: 1202 EIPLRNVVSWTSMI 1215
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 218/387 (56%), Gaps = 8/387 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN+ TF + C++ + GRQ HG+ +K + D + +++ Y CG L
Sbjct: 86 LSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLND 145
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF E ++++WN+MI G + NG +A+ LF + + +WN MISG++
Sbjct: 146 ARWVFDE-SSELDVVSWNSMIDGCIRNGNILEALSLFSKMTER----NDISWNMMISGYA 200
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA LF +MQ P+ + SVLSAC+ L AL G H ++ + + D
Sbjct: 201 QNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSI 260
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ ALI MY KCG A + F + D + + A ISG NG E A+++F+ M+
Sbjct: 261 LSAALIDMYAKCGSIDLAMQAFST--SRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKG 318
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E + P+ S++AVL AC HAG V+K F M D G++P+ +H+ CMVDLLGR+G L+
Sbjct: 319 EGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLE 378
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA + + +P +P ++ +LLGAC + N+++G+ + L E + + +++LSNIYA
Sbjct: 379 EAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYA 438
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ ED ++R+ + R++ ++PG S
Sbjct: 439 ESMKGEDAEQVRKTMRRRKVDRVPGCS 465
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 36/276 (13%)
Query: 111 PDPATWNSMISGFSQL---GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
P +N+ I GFS+ G + LF +M + P+ T + C++ A LG
Sbjct: 52 PTVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLG 111
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ------------------- 208
++ HG VI+ D + ++I Y CG+ + AR FD+
Sbjct: 112 RQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRN 171
Query: 209 ----------FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
++ + WN MISGY +NG+ + A+ +F MQ +PNSA V+VL
Sbjct: 172 GNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVL 231
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
SAC G +D + + ++ ++D+ + G +D A + + V
Sbjct: 232 SACSQLGALDHGCWVHCYIGKK-CVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDV 290
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
S Y + + + EE ++M+ E +P
Sbjct: 291 SAYTAAISGL---AMNGCSEEALQLFEQMKGEGISP 323
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 215/387 (55%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++V+SACA ++ GRQVH S+ I AL+D+Y+KCG
Sbjct: 232 KPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG------- 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LFEGL+++ D +WN++I G++ +
Sbjct: 285 -------------------------EVETASGLFEGLSYK----DVISWNTLIGGYTHMN 315
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + ++ S+
Sbjct: 316 LYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A++ FD + + WNAMI G+ +G A +IF M+++
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNR--SLSSWNAMIFGFAMHGRANPAFDIFSRMRKD 433
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ +FV +LSAC H+G +D IF M +D+ + PK EH+GCM+DLLG SG E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKE 493
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I + +P ++ SLL AC H N +LGE A L ++EP+N +V+LSNIYA
Sbjct: 494 AEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYAT 553
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V + R ++ND+ + K+PG S+
Sbjct: 554 AGRWNEVAKRRALLNDKGMKKVPGCSS 580
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 196/382 (51%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ ACA + G+Q+HG LK+ D + T+L+ MY+K G A V
Sbjct: 101 PNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++ +I G NG A ++F+ + D +WN++ISG+++ G
Sbjct: 161 FDQ-SSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP----VKDVVSWNALISGYAETGN 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + +VLSACA ++++LG++ H + + + A
Sbjct: 216 YKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNA 275
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y+KCG+ A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 276 LIDLYIKCGEVETASGLFEGLSYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G +D I +D G+ ++D+ + G ++ A+
Sbjct: 334 PNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQ 393
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H ++ ++ ++++ +EP++ T +LS ++G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSG 453
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M D ++T
Sbjct: 454 M---LDLGRHIFRSMTEDYKIT 472
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 158/355 (44%), Gaps = 74/355 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A +VF ++ N+L WNTM G L+ DP +
Sbjct: 53 LTYAISVFDSIQ-EPNLLIWNTMFRGHALSS-------------------DPVS------ 86
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A L+ M S G+VP+ +L ACA A + G++ HGHV++ +
Sbjct: 87 ----------ALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDL 136
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LI+MY+K G+ AR+ FDQ EI
Sbjct: 137 DLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP 196
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNA+ISGY G Y+ A+E+F M + VKP+ ++ V VLSAC + ++ Q
Sbjct: 197 VKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQ 256
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD G + ++DL + G ++ A L L V +++L+G + H+
Sbjct: 257 VHSWIDDH-GFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGG-YTHM 314
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNI--YAGLGRWEDVGRIRQMINDRQL 383
N L +E + QEM E+P +LS + A LG D+GR + D++L
Sbjct: 315 N--LYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAI-DIGRWIHVYIDKRL 366
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 332 ESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEA 391
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +R++ +WN MI G ++GR+ A ++F + +G +PD T+ ++S S
Sbjct: 392 AQQVFDSML-NRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACS 450
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK 149
GM +F M + + P L+
Sbjct: 451 HSGMLDLGRHIFRSMTEDYKITPKLE 476
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 212/372 (56%), Gaps = 9/372 (2%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
AC+ + L+ GRQVH L +K Q ++ + AL+ MY KC + VF ++ ++ +
Sbjct: 427 ACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMR-VKDTV 485
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
+WN+ IA ++ N E A +F+ + D +W ++IS ++Q EA + F+ M
Sbjct: 486 SWNSFIAALVQNNMLEDARHIFDNM----LSRDVVSWTTIISAYAQAERGDEAVEFFKTM 541
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
P+ +T +LS C L + KLG++ H I+ ++ + +A AL+SMY KCG
Sbjct: 542 LHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCA 601
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ + FD E + D WN I+G ++G A+++++ M+ V PN +FV +L+
Sbjct: 602 D-SHKVFDSMEER--DIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLN 658
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTV 318
AC HAG VD+ Q F M D+GL P EH+ CMVDLLGR+G + A + I ++P EP
Sbjct: 659 ACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDT 718
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
++ +LLGAC H N+++G A KL EP N +V+LSNIY+ LG W +V +R+++
Sbjct: 719 VIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIM 778
Query: 379 NDRQLTKLPGIS 390
R ++K PG S
Sbjct: 779 KQRGVSKEPGCS 790
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 119/228 (52%), Gaps = 11/228 (4%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
TAL+ +CG + A +F+++ +++WN MI G M NG ++A ELF+ +
Sbjct: 325 TALLTGLARCGRITEARILFEQIPDP-IVVSWNAMITGYMQNGMVDEAKELFDRMPFR-- 381
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +W MI+G++Q G EA L + + GM+PSL +TS AC+ + AL+ G++
Sbjct: 382 --NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQ 439
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++A + + ALISMY KC + R+ F++ +K D WN+ I+ +N
Sbjct: 440 VHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVK--DTVSWNSFIAALVQN 497
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
E A IFD M V S+ ++SA A D+A++ F M
Sbjct: 498 NMLEDARHIFDNMLSRDV----VSWTTIISAYAQAERGDEAVEFFKTM 541
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 13/246 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++PNS ++S C L + G+Q+H + +K S+ ++ AL+ MY KCGC +H
Sbjct: 546 EKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCAD-SH 604
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ R+I TWNT I G +G +A++++E + G P+ T+ +++ S
Sbjct: 605 KVFDSME-ERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHA 663
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E ++ F+ M + G+ P L+ C+ +L D+ G E + + D
Sbjct: 664 GLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQ----GAEK--FIYDMPIEPD 717
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +AL+ RR ++ F +P + + + + Y G + E+ +
Sbjct: 718 TVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKI 777
Query: 242 MQQEKV 247
M+Q V
Sbjct: 778 MKQRGV 783
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 28/327 (8%)
Query: 49 GTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG 108
T L+ Y + G + A VF + RN + WN M++ + NG A LF+ +
Sbjct: 98 ATILLSGYARLGRVLDARRVFDGMP-ERNTVAWNAMVSCYVQNGDITMARRLFDAMPSR- 155
Query: 109 FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
D +WNSM++G+ +A+ LF++M +V ++ + + +
Sbjct: 156 ---DVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFR 212
Query: 169 ETHGHVIRADLNKDESMATALISM----YMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
H D + S+ +A+ + ++ +P + F+ D ++++
Sbjct: 213 MMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFES------DVVIGTSILN 266
Query: 225 GYGRNGE-YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
Y R+ + A++ FD M V+ N ++ +++A H G +D A+ ++ D
Sbjct: 267 VYTRDASALDIAIKFFDGM----VERNEYTWSTMIAALSHGGRIDAAIAVYGR--DPVKS 320
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P Q ++ L R GR+ EAR L ++P+P V +++++ ++ + + +E
Sbjct: 321 IPSQT---ALLTGLARCGRITEARILFEQIPDPIVVSWNAMITG---YMQNGMVDEAKEL 374
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWED 370
M N + + YA GR E+
Sbjct: 375 FDRMPFRNTISWAGMIAGYAQNGRSEE 401
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 43/262 (16%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D ++V Y + A N+F+++ RN++TW MI+G + + K ++F +
Sbjct: 156 DVTSWNSMVTGYCHSRQMVDAWNLFKQMP-QRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214
Query: 105 AHEGFKPDPATWNSMIS---GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA-D 160
HEG PD + + S++S G LG+ E + + TG + TS+L+ D
Sbjct: 215 HHEGASPDQSNFASVLSAVTGLQDLGV-LEVLRPL--VLKTGFESDVVIGTSILNVYTRD 271
Query: 161 LSALKLGKE--------------------THGHVIRA-------DLNKDESMATALISMY 193
SAL + + +HG I A D K TAL++
Sbjct: 272 ASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGL 331
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
+CG+ + AR F+Q PD WNAMI+GY +NG + A E+FD M N+
Sbjct: 332 ARCGRITEARILFEQI---PDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFR----NTI 384
Query: 253 SFVAVLSACGHAGHVDKALQIF 274
S+ +++ G ++AL +
Sbjct: 385 SWAGMIAGYAQNGRSEEALDLL 406
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 40 IEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAME 99
+ + D +A + + G L A VF + R+I+ WN+MI+ +G E A
Sbjct: 27 VHRALDKSAHSARIRELARLGRLREAREVFDAMP-HRDIIAWNSMISAYCNSGMLEDARI 85
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
LF+ ++ + T ++SG+++LG +A ++F+ M V + + S
Sbjct: 86 LFDAISGGNVR----TATILLSGYARLGRVLDARRVFDGMPERNTV-AWNAMVSCYVQNG 140
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
D++ + + A ++D + ++++ Y Q A F Q + + W
Sbjct: 141 DITMAR-------RLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQR--NLVTW 191
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
MISGY R ++ +IF +M E P+ ++F +VLSA
Sbjct: 192 TVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSA 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 76/186 (40%), Gaps = 49/186 (26%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
GR +A E+F+ + H D WNSMIS + GM +A LF+ + S G V +
Sbjct: 47 GRLREAREVFDAMPHR----DIIAWNSMISAYCNSGMLEDARILFDAI-SGGNVRT---- 97
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
AT L+S Y + G+ ARR FD
Sbjct: 98 ----------------------------------ATILLSGYARLGRVLDARRVFDGMPE 123
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ + WNAM+S Y +NG+ A +FD M V S+ ++++ H+ + A
Sbjct: 124 R--NTVAWNAMVSCYVQNGDITMARRLFDAMPSRDV----TSWNSMVTGYCHSRQMVDAW 177
Query: 272 QIFTMM 277
+F M
Sbjct: 178 NLFKQM 183
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
L R GRL EARE+ +P + ++S++ A + NS + E+ + + N
Sbjct: 43 LARLGRLREAREVFDAMPHRDIIAWNSMISA---YCNSGMLEDARILFDAISGGNVRTAT 99
Query: 357 ILSNIYAGLGRWEDVGRI 374
IL + YA LGR D R+
Sbjct: 100 ILLSGYARLGRVLDARRV 117
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 216/383 (56%), Gaps = 12/383 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S +SAC+ L L+ G +++ + E + G ALVDM+ KCGCL A +F +
Sbjct: 134 TIVSTLSACSVLKNLEIGERIYRYVV-TEFEMSVRTGNALVDMFCKCGCLDKARAIFDSM 192
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ +N+ W +M++G + NGR+++A ELFE D W +M++G+ Q EA
Sbjct: 193 R-DKNVKCWTSMVSGYVSNGRTDEARELFE----RSPVKDVVLWTAMMNGYVQFNRFDEA 247
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF MQ+ + P + S+L+ CA AL+ GK HG++ + D+ + TAL+ M
Sbjct: 248 LELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDM 307
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A F +E+K D A W ++I G NG A++++ M+ V+ +
Sbjct: 308 YAKCGCIETALGVF--YEMKERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDI 365
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR- 311
+FVAVL+AC H G V + +IF M + ++PK EH+ C++DLL R+G LDEA ELI
Sbjct: 366 TFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDK 425
Query: 312 ---ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
E + V VY SLL A + N + E +A KL+++E + + +L+++YA RW
Sbjct: 426 MHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRW 485
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
EDV +R+ + D + K PG S+
Sbjct: 486 EDVTNVRRKMKDLGIRKFPGCSS 508
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 157/323 (48%), Gaps = 20/323 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ + L + G +VHG +K +SD+ + +L+ MY G + H V
Sbjct: 28 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALGKMEITHKV 87
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFS--- 124
F E+ R++++WN +I+ + +GR E A+ +F+ ++ E K D T S +S S
Sbjct: 88 FDEMP-ERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLK 146
Query: 125 --QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++G R + + E S V + + + C L + + + +K+
Sbjct: 147 NLEIGERIYRYVVTEFEMS---VRTGNALVDMFCKCGCLDKARA-------IFDSMRDKN 196
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
T+++S Y+ G+ AR F++ +K D W AM++GY + ++ A+E+F M
Sbjct: 197 VKCWTSMVSGYVSNGRTDEARELFERSPVK--DVVLWTAMMNGYVQFNRFDEALELFRCM 254
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q +++P++ V++L+ C G +++ I + ++ + + +VD+ + G
Sbjct: 255 QTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIREN-RVTVDKVVGTALVDMYAKCGC 313
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
++ A + E+ E + + SL+
Sbjct: 314 IETALGVFYEMKERDTASWTSLI 336
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 17/244 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +S+++ CA L+ G+ +HG + D ++GTALVDMY KCGC+ A V
Sbjct: 261 PDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGV 320
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+K R+ +W ++I G+ NG S +A++L+ + + G + D T+ ++++ S G
Sbjct: 321 FYEMK-ERDTASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGF 379
Query: 129 RFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
E ++F M + C+ +L L A +L + HG +D+
Sbjct: 380 VAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGE-------RDK 432
Query: 184 SMA---TALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ +L+S G A R ++ E ++ D + + S Y +E +
Sbjct: 433 TLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVR 492
Query: 240 DLMQ 243
M+
Sbjct: 493 RKMK 496
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ LF +++ G+ P + VL + L + G++ HG+ ++ L D + +L+
Sbjct: 13 KVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGLESDSYVCNSLM 72
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKP 249
MY G+ + FD E+ D WN +IS Y +G +E A+ +F M +E +K
Sbjct: 73 GMYAALGKMEITHKVFD--EMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKA 130
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + V+ LSAC +++ +I+ + +F + + + +VD+ + G LD+AR +
Sbjct: 131 DEGTIVSTLSACSVLKNLEIGERIYRYVVTEFEMSVRTGN--ALVDMFCKCGCLDKARAI 188
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+ + V + S++ + +D E+
Sbjct: 189 FDSMRDKNVKCWTSMVSGYVSNGRTDEAREL 219
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 215/375 (57%), Gaps = 34/375 (9%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-- 102
D TA+V +++ G L A +F+E+ +N ++WN MIAG + + + EKA ELF+
Sbjct: 276 DVFAWTAMVSGFVQNGMLDEATRIFEEMP-EKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 103 -------------GLAHEGF------------KPDPATWNSMISGFSQLGMRFEAFKLFE 137
G A G + D +W +MISG++Q G EA LF
Sbjct: 335 PSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFI 394
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
KM+ G + + + LS+CA+++AL+LGK+ HG +++A AL++MY KCG
Sbjct: 395 KMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCG 454
Query: 198 QPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
A FD FE I D WN MI+GY R+G + A+ +F+ M+ +KP+ + V
Sbjct: 455 SIEEA---FDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKM-TIKPDDVTLVG 510
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
VLSAC H G VDK ++ F M ++G+ +H+ CM+DLLGR+GRLDEA L++ +P
Sbjct: 511 VLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY 570
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
P + + +LLGA H +++LGE+ A K+ EMEP+N +V+LSN+YA GRW +V +R
Sbjct: 571 PDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMR 630
Query: 376 QMINDRQLTKLPGIS 390
+ D+ + K+PG S
Sbjct: 631 SKMRDKGVKKVPGYS 645
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 140/297 (47%), Gaps = 39/297 (13%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
++ T+ A++ YL CA VF+++ R++++WN M++G + NG A LF
Sbjct: 87 RRRSTVTYNAMISGYLSNNKFDCARKVFEKMP-DRDLISWNVMLSGYVKNGNLSAARALF 145
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM------QSTGMVPS------LK 149
+ + D +WN+M+SGF+Q G EA K+F++M G++ + ++
Sbjct: 146 NQMPEK----DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIE 201
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLN-----------KDESMATALISMYMKCGQ 198
+ + D + G+V + L+ +D+ +I+ Y + G
Sbjct: 202 DARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGL 261
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
S ARR F++ I+ D W AM+SG+ +NG + A IF+ M ++ N S+ A++
Sbjct: 262 LSEARRLFEELPIR--DVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMI 315
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ + ++KA ++F M + MV + G +D+A+ L E+P+
Sbjct: 316 AGYVQSQQIEKARELFDQMP-----SRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 15/245 (6%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +S+CA + L+ G+Q+HG +K Q+ + G AL+ MY KCG + A +VF
Sbjct: 404 NRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVF 463
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ ++I++WNTMIAG +G ++A+ LFE + KPD T ++S S G+
Sbjct: 464 EDIT-EKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLV 521
Query: 130 FEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDES 184
+ + F M Q+ G+ + K C+ +L L AL L K + D +
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY-------PDAA 574
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AL+ G + ++ FE++PD+ + + + Y +G + E+ M+
Sbjct: 575 TWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMR 634
Query: 244 QEKVK 248
+ VK
Sbjct: 635 DKGVK 639
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 130/276 (47%), Gaps = 23/276 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V++ +++S A +++ R++ L + + L+ Y++ G + A
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRIEDARR 205
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F K I++WN ++ G + R + A LF+ + D +WN MI+G++Q G
Sbjct: 206 LFDS-KMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVR----DKISWNIMITGYAQNG 260
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA +LFE++ + V+ + A ++ +E K+E
Sbjct: 261 LLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP--------EKNEVSWN 312
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I+ Y++ Q AR FDQ + + + WN M++GY + G + A +FD M Q
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSR--NTSSWNTMVTGYAQCGNIDQAKILFDEMPQR-- 368
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+ S+ A++S +G ++AL +F M D G+
Sbjct: 369 --DCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 54/238 (22%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+I+ WN I+ M G+ E A+ +F G+ + T+N+MISG+ A K+F
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCARKVF 114
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
EKM ++ ++S Y+K
Sbjct: 115 EKMPDRDLIS---------------------------------------WNVMLSGYVKN 135
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G S AR F+Q K D WNAM+SG+ +NG E A +IFD M + N S+
Sbjct: 136 GNLSAARALFNQMPEK--DVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNG 189
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+LSA G ++ A ++F D + + + C++ R RLD+AR L +P
Sbjct: 190 LLSAYVQNGRIEDARRLF-----DSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMP 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
I D WN IS Y R G+ ESA+ +F+ M+ + ++ ++ A++S D A
Sbjct: 55 IVDSDIVKWNRKISAYMRKGQCESALSVFNGMR----RRSTVTYNAMISGYLSNNKFDCA 110
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGAC 328
++F M P ++ V L G ++G L AR L ++PE V ++++L
Sbjct: 111 RKVFEKM-------PDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSG- 162
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
+ EE +M +N + L + Y GR ED R+
Sbjct: 163 --FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRL 206
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 205/342 (59%), Gaps = 7/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++CG L A + F+ + R ++ W MI G M + E A +F+ +
Sbjct: 190 NAMISGYIECGDLEKASHFFK-VAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMT---V 245
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ TWN+MISG+ + + KLF M G+ P+ ++S L C++LSAL+LG++
Sbjct: 246 NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQ 305
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V ++ L D + T+LISMY KCG+ A + F+ +K D WNAMISGY ++
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV--MKKKDVVAWNAMISGYAQH 363
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G + A+ +F M K++P+ +FVAVL AC HAG V+ + F M D+ ++P+ +H
Sbjct: 364 GNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDH 423
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CMVDLLGR+G+L+EA +LIR +P P +V+ +LLGAC H N +L E A KL ++
Sbjct: 424 YTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLN 483
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+N +V L+NIYA RWEDV R+R+ + + + K+PG S
Sbjct: 484 SQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 46/293 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ DT ++ Y++ A + F + ++ +WNTMI G G EKA ELF
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMP-FKDAASWNTMITGYARRGEMEKARELFY 179
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + + +WN+MISG+ + C DL
Sbjct: 180 SM----MEKNEVSWNAMISGYIE--------------------------------CGDL- 202
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
E H + + TA+I+ YMK + A F + + WNAM
Sbjct: 203 ------EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN-KNLVTWNAM 255
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY N E +++F M +E ++PNS+ + L C + QI ++
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS-T 314
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
L ++ + + G L +A +L + + V +++++ H N+D
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNAD 367
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A + FD EI D +N M+S Y RN +E A FD M + ++AS+ +++
Sbjct: 112 AHQLFD--EIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGY 165
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
G ++KA ++F M ++ + + M+ G L++A + P V +
Sbjct: 166 ARRGEMEKARELFYSM-----MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW 220
Query: 322 HSLLGACWCHLNSDLGEEM 340
+++ +L E M
Sbjct: 221 TAMITGYMKAKKVELAEAM 239
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 220/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T+ + AC L L G H ++K+ + + LV M+ GC+ A +
Sbjct: 109 PNNYTYSFLFKACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKL 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +L +R+++TW +I G + G+ ELF+ + + +W++MI+G+ ++G
Sbjct: 169 F-DLSSNRDVITWTALINGYVRAGQVLIGRELFDKMPER----NSVSWSAMITGYVRVGF 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF M +G P+ + ++ACA L AL G+ H ++ R ++ D M A
Sbjct: 224 FEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F E++ D + +ISG +G+ +AVE+F+ M E V
Sbjct: 284 LIDMYAKCGCIEIACSIFG--ELRNRDVHVYTCLISGLANHGQSATAVELFERMHSEGVV 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV+VL+AC G VDK L+IF M +G +P+ +H+GC+VDLLGR+G+L+EA++
Sbjct: 342 PNEVTFVSVLNACSRMGLVDKGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKK 401
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++E+P +P V +LL A + + +LGEE L ++ ++ V+LSN+YA +
Sbjct: 402 LVKEMPMKPDSYVLGALLNASRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANK 461
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++V R+R+ + D+++ K+PG S
Sbjct: 462 WDEVARVRRGMGDKKVRKVPGCS 484
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 31/303 (10%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A+ +F L+ R+ WNT+I KA+ LF+ + + F P+ T++ +
Sbjct: 61 LSHAYRLFLGLR-HRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFK 119
Query: 122 GFSQLGMRF-------EAFKL---FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+ L + ++ KL F G+V + C D SA KL +
Sbjct: 120 ACTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMF-----AIFGCMD-SARKLFDLSS 173
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
N+D TALI+ Y++ GQ R FD+ + + W+AMI+GY R G
Sbjct: 174 --------NRDVITWTALINGYVRAGQVLIGRELFDK--MPERNSVSWSAMITGYVRVGF 223
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+E A+E+F+ M PN A V ++AC G +D+ I + + + +
Sbjct: 224 FEEALELFNAMLISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRN-RMDLDRVMGA 282
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
++D+ + G ++ A + EL V VY L+ H S E+ + M E
Sbjct: 283 ALIDMYAKCGCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVEL---FERMHSEG 339
Query: 352 PTP 354
P
Sbjct: 340 VVP 342
>gi|347954488|gb|AEP33744.1| chloroplast biogenesis 19, partial [Aethionema grandiflorum]
Length = 413
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 217/389 (55%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI++IS C G +HG K+ ++ M+GTA++ MY K
Sbjct: 14 EPNHITFIALISGCGDFPTGSETLGDLLHGYACKLGLDRTHVMVGTAILGMYSKRCRFGK 73
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI M +G+ ++A++LF+ + PD +W +MI+GF
Sbjct: 74 ARCVFDYME-DKNSVTWNTMIDAYMRSGKVDRAVKLFDEMP----DPDLISWTAMINGFV 128
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 129 KKGFHEEALVWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWVHRYVLSQDFKNNVR 188
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI +Y +CG +AR FD+ E + WN++I G NG ++ F MQ+
Sbjct: 189 VNNSLIDLYCRCGCVEFAREVFDKMEKRT--VVSWNSVIVGSAANGNAHESLVYFRKMQE 246
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E P++ +F L+AC H G V++ +Q F M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 247 EGFNPDAVTFTGALTACSHVGLVEEGIQYFQTMKRDYKISPRIEHYGCLVDLYSRAGRLE 306
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCH-LNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+A +L++ + +P V SLL AC H N++L E + L EM + + +VILSN+Y
Sbjct: 307 DALKLVQSMSMKPNEVVIGSLLAACRTHGNNTELAERLMKHLSEMNVKGHSNYVILSNMY 366
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 367 AADGKWEGAXKMRRKMKGLGLKKQPGFSS 395
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 218/383 (56%), Gaps = 6/383 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS TF ++ AC +LL + QVHGL +K+ SD AL+ +Y CG + CA +F
Sbjct: 87 NSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLF 146
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ R+ ++WN MI G + +G + A +F + + + +W S+ISG + G
Sbjct: 147 DNIP-ERDAVSWNIMIDGYIKSGDVKTAYGVFLDMPLK----NVVSWTSLISGLVEAGQS 201
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA L +MQ+ G + S+L+ACA+L AL G+ H +V+ ++ D + AL
Sbjct: 202 VEALSLCYEMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCAL 261
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY+KCG A F + + D W AMI G+ +G A+E F+ M++E ++P
Sbjct: 262 VNMYVKCGDMEEALSVFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRP 321
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS +F AVL AC + G V++ ++F M + + P EH+GCMVDLLGRSGRLDEA+EL
Sbjct: 322 NSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKEL 381
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I+++P +P+ ++ +LL ACW H + LG ++ L E++ ++ ++ L+ I A G+W
Sbjct: 382 IKKMPMKPSAVIWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKW 441
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
++ +R + + PG S+
Sbjct: 442 KEAAEVRLKMKSLGVPISPGKSS 464
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 157/367 (42%), Gaps = 49/367 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V S+++ACA+L L GR +H L D +IG ALV+MY+KCG + A +
Sbjct: 217 ELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALS 276
Query: 68 VFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF +LKG+ +++ W MI G ++GR +A+E F + EG +P+ T+ +++ S
Sbjct: 277 VFGKLKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYG 336
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E +LF+ M+ V PS++ C+ +L L K +L K
Sbjct: 337 GLVEEGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAK------------ELIKK 384
Query: 183 ESMATALISMYMKCGQPSWARRFF--------DQFEIKPDDPAFWNAMISGYGRNGEYES 234
M + + ++ + W R F E+ D + + + G+++
Sbjct: 385 MPMKPSAV-IWGALLKACWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKE 443
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGH---AGHVD---------KALQIFTMMDDDFG 282
A E+ M+ V + L+ H AGH D K QI + D G
Sbjct: 444 AAEVRLKMKSLGVPISPGKSSVTLNGIVHEFLAGHQDHPQMEQIQLKLKQIAERLRQDEG 503
Query: 283 LKPKQEHFGCMVDL---------LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+P + ++DL S +L A LI P T+ V +L CH
Sbjct: 504 YEPATKDL--LLDLENEEKETAMAQHSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTV 561
Query: 334 SDLGEEM 340
+ L ++
Sbjct: 562 AKLVSQI 568
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
A +F G+ P+ WN++I +S AF +++M S+ + + +L
Sbjct: 41 AQRVFNGIT----SPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLR 96
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
AC +L A+ + HG VI+ D AL+ +Y CG+ AR+ FD I D
Sbjct: 97 ACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDN--IPERDA 154
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
WN MI GY ++G+ ++A +F M + N S+ +++S AG +AL +
Sbjct: 155 VSWNIMIDGYIKSGDVKTAYGVFLDMPLK----NVVSWTSLISGLVEAGQSVEALSLCYE 210
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
M + G + ++ G LD+ R L
Sbjct: 211 MQNA-GFELDGVAIASLLTACANLGALDQGRWL 242
>gi|356534289|ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Glycine max]
Length = 591
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 215/385 (55%), Gaps = 27/385 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAH 66
+PNS TF S+ ACAS +LQ G +H LK ++ D + +L++ Y K G L +
Sbjct: 101 QPNSFTFPSLFKACASHPWLQHGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSR 160
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F ++ ++ TWNTM+A A+ S + F
Sbjct: 161 YLFDQI-SEPDLATWNTMLAAY----------------------AQSASHVSYSTSFEDA 197
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
M EA LF MQ + + P+ + +++SAC++L AL G HG+V+R +L + +
Sbjct: 198 DMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQGAWAHGYVLRNNLKLNRFVG 257
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ MY KCG + A + FD E+ D +NAMI G+ +G A+E++ M+ E
Sbjct: 258 TALVDMYSKCGCLNLACQLFD--ELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLED 315
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ P+ A+ V + AC H G V++ L+IF M G++PK EH+GC++DLLGR+GRL EA
Sbjct: 316 LVPDGATIVVTMFACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEA 375
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E ++++P +P ++ SLLGA H N ++GE L E+EPE +V+LSN+YA +
Sbjct: 376 EERLQDMPMKPNAILWRSLLGAAKLHGNLEMGEAALKHLIELEPETSGNYVLLSNMYASI 435
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV R+R ++ D + KLPG S
Sbjct: 436 GRWNDVKRVRMLMKDHGVDKLPGFS 460
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 218/389 (56%), Gaps = 8/389 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C S N+ TF S++ AC++L + Q+H K+ ++D +L++ Y G
Sbjct: 108 CSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFK 167
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH +F + ++ +WN++I G + G+ + A+ LF +A + + +W +MISG+
Sbjct: 168 LAHLLFDRIPEPDDV-SWNSVIKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGY 222
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q M EA +LF +MQ++ + P + + LSACA L AL+ GK H ++ + + D
Sbjct: 223 VQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDS 282
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ LI MY KCG+ A F IK W A+ISGY +G A+ F MQ
Sbjct: 283 VLGCVLIDMYAKCGEMEEALEVFKN--IKKKSVQAWTALISGYAYHGHGREAISKFMEMQ 340
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +KPN +F AVL+AC + G V++ IF M+ D+ LKP EH+GC+VDLLGR+G L
Sbjct: 341 KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLL 400
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
DEA+ I+E+P +P ++ +LL AC H N +LGEE+ L ++P + +V +NI+
Sbjct: 401 DEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIH 460
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +W+ R+++ ++ + K+PG S
Sbjct: 461 AMDKKWDKAAETRRLMKEQGVAKVPGCST 489
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 40/290 (13%)
Query: 101 FEGLAHEGF-KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
+ + +GF +PD WN MI GFS + L+++M + + S+L AC+
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACS 126
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF- 218
+LSA + + H + + D +LI+ Y G A FD+ +PDD ++
Sbjct: 127 NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWN 185
Query: 219 -----------------------------WNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
W MISGY + + A+++F MQ V+P
Sbjct: 186 SVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH-FGC-MVDLLGRSGRLDEAR 307
++ S LSAC G +++ I + ++ + + + GC ++D+ + G ++EA
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKT---RIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
E+ + + + +V + +L+ H + G E K EM+ P VI
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGH---GREAISKFMEMQKMGIKPNVI 349
>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
Length = 574
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 205/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ + VI AC + L GR +H LK D + + LVDMY KCG + A
Sbjct: 98 KPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQ 157
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + K D T MI+G+++ G
Sbjct: 158 LFDRMP------------------------------------KKDLVTRTVMIAGYAECG 181
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E++ LF++M+ G VP + ++++ACA L A+ + H +V + D + T
Sbjct: 182 KPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGT 241
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG +R FD+ E K + W+AMI YG +G+ A+E+F +M +
Sbjct: 242 AMIDMYAKCGSIDSSREIFDRMEQK--NVISWSAMIGAYGYHGQGREALELFHMMLNSGI 299
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+++L AC HAG VD LQ+F++M +G++P +H+ CMVDLLGR+GRLD+A
Sbjct: 300 IPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQAL 359
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI + E ++ + LGAC H DL E+ A L ++ +NP +++LSNIYA G
Sbjct: 360 RLIENMEVEKDEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAG 419
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+DV +IR ++ R+L K+PG +
Sbjct: 420 RWKDVAKIRNLMAKRRLKKIPGYT 443
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 108/227 (47%), Gaps = 17/227 (7%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
DP +W+ MI GF + G F+ F ++ G P + V+ AC D L +G+ H
Sbjct: 65 DPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIH 124
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
V++ L+ D + + L+ MY KCG A++ FD+ K D MI+GY G+
Sbjct: 125 STVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKK--DLVTRTVMIAGYAECGK 182
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM-------MDDDFGLK 284
+ +FD M+++ P+ + V +++AC G ++KA + +D + G
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGT- 241
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
M+D+ + G +D +RE+ + + V + +++GA H
Sbjct: 242 -------AMIDMYAKCGSIDSSREIFDRMEQKNVISWSAMIGAYGYH 281
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 213/377 (56%), Gaps = 9/377 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++IS C + + L GRQ+H L LK ++ +L+ +Y KCG L A VF +
Sbjct: 376 TLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMS-E 434
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R+I++W +MI G KA E F+G+ + TWN+M+ + Q G + K+
Sbjct: 435 RDIVSWTSMITAYSQIGNIIKAREFFDGMDTR----NAITWNAMLGAYIQHGAEEDGLKM 490
Query: 136 FEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M S + P ++ CAD+ A KLG + GH ++A L + S+A A I+MY
Sbjct: 491 YSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYS 550
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ S A++ FD K D WNAMI+GY ++G + A + FD M + KP+ S+
Sbjct: 551 KCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISY 608
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLS C H+G V + F MM G+ P EHF CMVDLLGR+G L EA++LI ++P
Sbjct: 609 VAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP 668
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+PT V+ +LL AC H N +L E A + E++ + +++L+ IY+ G+ +D +
Sbjct: 669 MKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQ 728
Query: 374 IRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 729 VRKLMRDKGIKKNPGYS 745
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 7/253 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF V+ +C +L + Q+ GL K + D + TALVDM+++CG + A +
Sbjct: 136 PNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRL 195
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ I N+M+AG + A+E FE +A D +WN MI+ SQ G
Sbjct: 196 FSQIE-RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAER----DVVSWNMMIAALSQSGR 250
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA L +M G+ TS L+ACA L +L GK+ H VIR+ D +A+A
Sbjct: 251 VREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASA 310
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG A+R F+ + + + W +I G + + +VE+F+ M+ E +
Sbjct: 311 LIELYAKCGSFKEAKRVFNSLQDR--NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMA 368
Query: 249 PNSASFVAVLSAC 261
+ + ++S C
Sbjct: 369 IDQFALATLISGC 381
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 158/369 (42%), Gaps = 48/369 (13%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ +C S L R +HG + + S + L+ Y CG L A + + N
Sbjct: 11 LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRADIKEPN 70
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
++T N M+ G G A ELF+ + + D A+WN+++SG+ Q + + F
Sbjct: 71 VITHNIMMNGYAKQGSLSDAEELFDRMP----RRDVASWNTLMSGYFQARRFLDGLETFV 126
Query: 138 KMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M +G +P+ V+ +C L +L + G + D D + TAL+ M+++C
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRC 186
Query: 197 GQPSWARRFFDQFEIKPDDPAFW--NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
G +A R F Q E P + N+M++GY + + A+E F+ M + V S+
Sbjct: 187 GYVDFASRLFSQIE----RPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDV----VSW 238
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+++A +G V +AL G +V++ + RLD
Sbjct: 239 NMMIAALSQSGRVREAL-------------------GLVVEMHRKGVRLDS--------- 270
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGR 373
+ Y S L AC + G+++ K+ P+ +P L +YA G +++ R
Sbjct: 271 ----TTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKR 326
Query: 374 IRQMINDRQ 382
+ + DR
Sbjct: 327 VFNSLQDRN 335
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 176/417 (42%), Gaps = 77/417 (18%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ S ++ACA L L +G+Q+H ++ Q D + +AL+++Y KCG A VF
Sbjct: 269 DSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVF 328
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L+ RN ++W +I G L +E F
Sbjct: 329 NSLQ-DRNSVSWTVLIGG---------------SLQYECFS------------------- 353
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
++ +LF +M++ M + +++S C + L LG++ H +++ N+ ++ +L
Sbjct: 354 -KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSL 412
Query: 190 ISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDPAF 218
IS+Y KCG SW AR FFD + + +
Sbjct: 413 ISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTR--NAIT 470
Query: 219 WNAMISGYGRNGEYESAVEIFD-LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAM+ Y ++G E ++++ ++ Q+ V P+ ++V + C G QI
Sbjct: 471 WNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHT 530
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
GL + + + GR+ EA++L L V +++++ H +G
Sbjct: 531 VKA-GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQH---GMG 586
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ-MINDRQLTKLPGISAGI 393
++ A +M + P I + A L G +++ + +T++ GIS G+
Sbjct: 587 KQAAKTFDDMLSKGAKPDYI--SYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGL 641
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 47/276 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT++++ CA + + G Q+ G T+K + + A + MY KCG + A +
Sbjct: 502 PDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKL 561
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L G +++++WN MI G +G ++A + F+ + +G KPD ++ +++SG S G+
Sbjct: 562 FDLLNG-KDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGL 620
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ M G+ P L+ +
Sbjct: 621 VQEGKLYFDMMTRVHGISPGLEHF-----------------------------------S 645
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----SAVEIFDLMQ 243
++ + + G + A+ D+ +KP W A++S +G E +A +F+L
Sbjct: 646 CMVDLLGRAGHLTEAKDLIDKMPMKP-TAEVWGALLSACKIHGNDELAELAAKHVFEL-- 702
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P+S S++ + AG D + Q+ +M D
Sbjct: 703 ---DSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRD 735
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ + L +C AL + HG ++ L + L+ Y CG S ARR +
Sbjct: 5 QALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLL-R 63
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-------------------- 248
+IK + N M++GY + G A E+FD M + V
Sbjct: 64 ADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLE 123
Query: 249 ------------PNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGCMVD 295
PN+ +F V+ +CG G + A Q+ + DF P E +VD
Sbjct: 124 TFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVE--TALVD 181
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ R G +D A L ++ PT+ +S+L
Sbjct: 182 MFVRCGYVDFASRLFSQIERPTIFCRNSMLA 212
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 226/385 (58%), Gaps = 8/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF+ V AC + L + G Q+ +KI +S+ + A++ MY G + A V
Sbjct: 115 PNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++ +WN MI G + +G +A E+F+ ++ D +W ++I+G+ Q+G
Sbjct: 175 F-DWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSER----DVVSWTTIIAGYVQVGC 229
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M TG P+ + S L+ACA+L AL G+ H ++ ++++ +E + +
Sbjct: 230 FKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLAS 289
Query: 189 LISMYMKCGQPSWARRFF-DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG+ +A + F D++ +K WNAMI GY +G+ + A+++F+ M+ EKV
Sbjct: 290 LLDMYAKCGEIDFAAKVFHDEYGLKLKVWP-WNAMIGGYAMHGKSKEAIDLFEQMKVEKV 348
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +FVA+L+AC H V++ F M +G++P+ EH+GCMVDLLGRSG L EA
Sbjct: 349 SPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAE 408
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E + +P P +++ +LLGAC H + + G+ + ++E++ ++ V+L+N+Y+ G
Sbjct: 409 ETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASG 468
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W++ +RQ I K PG S+
Sbjct: 469 QWDEAKAVRQKIEVSGRKKTPGCSS 493
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 126/297 (42%), Gaps = 45/297 (15%)
Query: 105 AHEGF----KPDPATWNSMISGFSQLGMR-FEAFKLFEKM-QSTGMVPSLKCVTSVLSAC 158
AH+ F KPD +N+MI + + + ++F M + +G +P+ V AC
Sbjct: 68 AHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKAC 127
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF--------- 209
+ + G++ H I+ L + + A+I MY G ARR FD
Sbjct: 128 GNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWN 187
Query: 210 --------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
E+ D W +I+GY + G ++ A+++F M Q P
Sbjct: 188 IMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPP 247
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + + L+AC + +D+ I +D +K + ++D+ + G +D A ++
Sbjct: 248 NEFTLASALAACANLVALDQGRWIHVYIDKS-EIKMNERLLASLLDMYAKCGEIDFAAKV 306
Query: 310 IRELPEPTVSV--YHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILSN 360
+ + V +++++G H S DL E+ MK++++ P N FV L N
Sbjct: 307 FHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ--MKVEKVSP-NKVTFVALLN 360
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 219/414 (52%), Gaps = 34/414 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ ACA ++ G +VHG +K+ SD + L+ MY C + A V
Sbjct: 138 PDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKV 197
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF--------------------------E 102
F + R++++W TMI G + G + + + L+
Sbjct: 198 F-DTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDA 256
Query: 103 GLAHEGFKPDPA----TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
A + F+ P +WNSMISG +Q G E+ +F KMQ G+ P + +VL++C
Sbjct: 257 NFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSC 316
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
A+L L+LGK H ++ R + D + AL+ MY KCG A F K D
Sbjct: 317 ANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRK--DVYS 374
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
+ AMI G +G+ A+++F M + ++P+ +FV VL+AC H G V++ + F M
Sbjct: 375 YTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMS 434
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
+ L+P+ EH+GCMVDLLGR+G ++EA E IR +P EP V +LLGAC H +LG
Sbjct: 435 TIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELG 494
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
E + K++++EP +V++SNIY+ RW D ++R+ + +R L K PG S+
Sbjct: 495 ESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSS 548
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+ VT ++V+++CA+L L+ G+ VH + + ++D IG ALVDMY KCG +
Sbjct: 300 LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQ 359
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VFQ + +++ ++ MI G+ ++G+ KA++LF + G +PD T+ +++ S
Sbjct: 360 ACWVFQAM-NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 418
Query: 125 QLGMRFEAFKLFEKMQS 141
+G+ E K FE M +
Sbjct: 419 HVGLVEEGRKYFEDMST 435
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 111 PDPATWNSMISGFSQLGM-RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P+ +N++I G + E ++++M S G+VP + VL ACA+ A++ G+E
Sbjct: 102 PNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEE 161
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG I+ L D ++ L+ MY C AR+ FD + D W MI GY +
Sbjct: 162 VHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVSWTTMIQGYVKM 219
Query: 230 GEYESAVEIFDLMQQEKVKPN---SASFVAVLSACGHAGHVDKALQ 272
G V ++ +++ V + + V + CG A K Q
Sbjct: 220 GFAREGVGLY-IIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQ 264
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 216/384 (56%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF + SAC SL G+ +H +K + D TAL+DMY K G L A +
Sbjct: 81 PNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKL 140
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R + TWN M+AG G + A+ELF + + +W +MISG+S+
Sbjct: 141 FDQMP-VRGVPTWNAMMAGHARFGDMDVALELFRLMPSR----NVVSWTTMISGYSRSKK 195
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M Q GM+P+ + S+ A A+L AL++G+ + + K+ ++
Sbjct: 196 YGEALGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSN 255
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG+ A + F++ + WN+MI G +GE ++++D M E
Sbjct: 256 AVLEMYAKCGKIDVAWKVFNEIG-SLRNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGT 314
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +FV +L AC H G V+K IF M F + PK EH+GCMVDLLGR+G+L EA
Sbjct: 315 SPDDVTFVGLLLACTHGGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAY 374
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E+I+ +P +P ++ +LLGAC H N +L E A L +EP NP +VILSNIYA G
Sbjct: 375 EVIQRMPMKPDSVIWGALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAG 434
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V ++R+++ ++TK G S
Sbjct: 435 QWDGVAKLRKVMKGSKITKSAGHS 458
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 106 HEGFKPDPATWNSMISGFS-QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
H KP +N +I +S + + F L+ +M +P+ + SAC LS+
Sbjct: 40 HHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFSACTSLSSP 99
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG+ H H I++ D ATAL+ MY K G AR+ FDQ ++ WNAM++
Sbjct: 100 SLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVR--GVPTWNAMMA 157
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G+ R G+ + A+E+F LM N S+ ++S + +AL +F M+ + G+
Sbjct: 158 GHARFGDMDVALELFRLMPSR----NVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGMM 213
Query: 285 PKQEHFGCMVDLLGRSGRLD 304
P + G L+
Sbjct: 214 PNAVTLASIFPAFANLGALE 233
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 215/387 (55%), Gaps = 7/387 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EP+ T SV+SACA+L L+ G+Q+H L+ + I AL+ Y K G + A
Sbjct: 291 SMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETA 350
Query: 66 HNVFQE-LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ + + N++++ ++ G + G +++A E+F+ + + D W +MI G+
Sbjct: 351 RRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNR----DVIAWTAMIVGYE 406
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA +LF M +G P+ + +VLSACA L+ L GK+ H IR+ + S
Sbjct: 407 QNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVS 466
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ A+I++Y + G ARR FDQ + + W +MI ++G E A+ +F+ M +
Sbjct: 467 VSNAIITVYARSGSVPLARRVFDQICWRKE-TVTWTSMIVALAQHGLGEQAIVLFEEMLR 525
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP+ +++ V SAC HAG +DK + + M ++ G+ P+ H+ CMVDLL R+G L
Sbjct: 526 VGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLT 585
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA E I+ +P P V+ SLL AC N+DL E A KL ++P+N + L+N+Y+
Sbjct: 586 EAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYS 645
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D RI ++ D+ + K G S
Sbjct: 646 ACGRWNDAARIWKLRKDKAVKKETGFS 672
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/394 (28%), Positives = 187/394 (47%), Gaps = 57/394 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +V+S+CA+ GR+VH +K+ S + +++ MY KCG A V
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ +K R+ +WN M++ GR + A+ +FE + +WN++I+G++Q G+
Sbjct: 221 FERMK-VRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQNGL 275
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A K F +M ++ M P VTSVLSACA+L LK+GK+ H +++R + +
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335
Query: 188 ALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD-DP 216
ALIS Y K G ARR D+ F++ + D
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY +NG+ + A+E+F M + +PNS + AVLSAC ++ QI
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455
Query: 277 MDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWC 330
++ QE ++ + RSG + AR + ++ + TV+ + S++ A
Sbjct: 456 -----AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT-WTSMIVALAQ 509
Query: 331 HLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
H LGE+ + +EM +P+ T + S
Sbjct: 510 H---GLGEQAIVLFEEMLRVGVKPDRVTYIGVFS 540
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 128/263 (48%), Gaps = 15/263 (5%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCG----CLPCAHNVFQELK-GSRNILTWNTM 84
GR +H +K + L+ Y + G C A +F ++ RN TWN++
Sbjct: 44 GRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWNSL 103
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
++ +GR A +F + D +W M+ G ++ G ++A K F M G+
Sbjct: 104 LSMYAKSGRLADARVVFAQMPER----DAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGL 159
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
PS +T+VLS+CA A +G++ H VI+ L+ +A +++ MY KCG AR
Sbjct: 160 APSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARA 219
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
F++ +++ + WNAM+S Y G + A+ +F+ M++ + S+ A+++
Sbjct: 220 VFERMKVRSESS--WNAMVSLYTHQGRMDLALSMFENMEERSI----VSWNAIIAGYNQN 273
Query: 265 GHVDKALQIFTMMDDDFGLKPKQ 287
G D AL+ F+ M ++P +
Sbjct: 274 GLDDMALKFFSRMLTASSMEPDE 296
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 212/386 (54%), Gaps = 42/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T S+I C+ L G+ VHG T++ QSD I ++L+D+Y KCG + A N
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAEN 364
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + S+ + +WN MISG+ G
Sbjct: 365 IFKLIPKSKVV------------------------------------SWNVMISGYVAEG 388
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
FEA LF +M+ + + P TSVL+AC+ L+AL+ G+E H +I L+ +E +
Sbjct: 389 KLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMG 448
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KCG A F F+ P D W +MI+ YG +G+ A+E+F M Q
Sbjct: 449 ALLDMYAKCGAVDEA---FSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSN 505
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+ +F+A+LSACGHAG VD+ F M + +G+ P+ EH+ C++DLLGR+GRL EA
Sbjct: 506 MKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEA 565
Query: 307 RELIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
E++++ PE V + +L AC H N DLG E+A L + +P++ + +++LSN+YA
Sbjct: 566 YEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYAS 625
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+W++V +R + + L K PG S
Sbjct: 626 AHKWDEVRVVRSKMKELGLKKNPGCS 651
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 182/375 (48%), Gaps = 43/375 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSVT + IS+CA LL L G ++H + D+ I +ALVDMY KCG L
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHL----- 258
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A+E+FE + K WNSMISG+ G
Sbjct: 259 ---------------------------EMAIEVFEQMP----KKTVVAWNSMISGYGLKG 287
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+LF++M + G+ P+L ++S++ C+ + L GK HG+ IR + D + +
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ +Y KCG+ A F I WN MISGY G+ A+ +F M++ V
Sbjct: 348 SLMDLYFKCGKVELAENIFKL--IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P++ +F +VL+AC ++K +I ++ + L + G ++D+ + G +DEA
Sbjct: 406 EPDAITFTSVLTACSQLAALEKGEEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
+ + LP+ + + S++ A H + + E+ ++ + M+P+ T ILS +AG
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAG 524
Query: 365 LGRWEDVGRIRQMIN 379
L E QM+N
Sbjct: 525 LVD-EGCYYFNQMVN 538
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 175/382 (45%), Gaps = 50/382 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T+ SV+ AC L G+ +H +K D ++G++LV MY KC N
Sbjct: 103 KPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKC-------N 155
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F EKA+ LF +E + D A WN++IS + Q G
Sbjct: 156 AF-------------------------EKAIWLF----NEMPEKDVACWNTVISCYYQSG 186
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F M+ G P+ +T+ +S+CA L L G E H +I + D +++
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A F+Q K WN+MISGYG G+ S +++F M E V
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKT--VVAWNSMISGYGLKGDSISCIQLFKRMYNEGV 304
Query: 248 KPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRL 303
KP + +++ C + + K + +T+ + + + + F ++DL + G++
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRN-----RIQSDVFINSSLMDLYFKCGKV 359
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
+ A + + +P+ V ++ ++ L LG M+ +EP+ T +L+
Sbjct: 360 ELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTAC 419
Query: 362 YAGLGRWEDVGRIRQMINDRQL 383
+ L E I +I +++L
Sbjct: 420 -SQLAALEKGEEIHNLIIEKKL 440
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 41/315 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ ++ AC + L+ G+ +H + + Q+D + L+++YL C A VF ++
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLGMRFEA 132
I WN ++AG N +A+ELFE L H + KPD T+
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTY---------------- 109
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
SVL AC L LGK H +++ L D + ++L+ M
Sbjct: 110 -------------------PSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGM 150
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F+ E+ D A WN +IS Y ++G ++ A+E F LM++ +PNS
Sbjct: 151 YAKCNAFEKAIWLFN--EMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSV 208
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ +S+C +++ ++I +++ F L +VD+ G+ G L+ A E+
Sbjct: 209 TITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS--SALVDMYGKCGHLEMAIEVFE 266
Query: 312 ELPEPTVSVYHSLLG 326
++P+ TV ++S++
Sbjct: 267 QMPKKTVVAWNSMIS 281
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 219/389 (56%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLY--LQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C FG +HG K+ ++ M+GTA++ MY K G +
Sbjct: 64 EPNHITFIALLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSK 123
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++G +N +TWNTMI G M G+ + A +LF+ + G +W +MI+GF
Sbjct: 124 ARLVFDHMEG-KNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGL----ISWTAMINGFV 178
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQS+G+ P + +VL+AC +L AL G H +++ D +
Sbjct: 179 KKGFHEEALVWFREMQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVR 238
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ + I ++ +CG A+ FD E + WN++I + NG + ++ F MQ+
Sbjct: 239 VNNSSIDLHCRCGCVELAQPVFDHMEKRT--VVSWNSVIVVFSANGHADESLVYFRRMQE 296
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KPN+ +F L+AC H G V++ L+ F M ++ + P+ EH+GC+VDL R+GRL+
Sbjct: 297 EGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLE 356
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A +++ +P +P V SLL AC H N+ + E MK L + ++ + +VILSN+Y
Sbjct: 357 DALNVVQSMPMKPNEVVIGSLLAACRTHGNNTVLAERLMKHLSDTNVKSHSNYVILSNMY 416
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 417 AADGKWEGASKMRRKMKGLGLKKQPGFSS 445
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 127/314 (40%), Gaps = 77/314 (24%)
Query: 79 LTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK 138
++W + I + NGR +A + F + G +P+ T+ +++SG
Sbjct: 33 ISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSG---------------- 76
Query: 139 MQSTGMVPSLKCVTSVLSACADLS--ALKLGKETHGHVIRADLNKDESM-ATALISMYMK 195
C D S + G HG+ + L+++ M TA+I MY K
Sbjct: 77 -------------------CGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 117
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD--------------- 240
G+ S AR FD E K + WN MI GY R G+ + A ++FD
Sbjct: 118 HGRVSKARLVFDHMEGK--NSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMIN 175
Query: 241 ----------------LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGL 283
MQ V+P+ + +AVL+AC + G + L + ++ DF
Sbjct: 176 GFVKKGFHEEALVWFREMQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRN 235
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
+ + +DL R G ++ A+ + + + TV ++S++ + ++D E +
Sbjct: 236 NVRVNN--SSIDLHCRCGCVELAQPVFDHMEKRTVVSWNSVIVVFSANGHAD---ESLVY 290
Query: 344 LQEMEPENPTPFVI 357
+ M+ E P +
Sbjct: 291 FRRMQEEGFKPNAV 304
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 214/387 (55%), Gaps = 7/387 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EP++ T SV+SACA+L L+ G+Q+H L+ + I AL+ Y K G + A
Sbjct: 475 SMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETA 534
Query: 66 HNVF-QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ Q + N++++ ++ G + G +++A E+F+ + + D W +MI G+
Sbjct: 535 RRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNR----DVIAWTAMIVGYH 590
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G EA +LF M G P+ + +VLSACA L+ L GK+ H IR+ + S
Sbjct: 591 QNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVS 650
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ A+I++Y + G ARR FDQ + + W +MI ++G E AV +F+ M +
Sbjct: 651 VSNAIITVYARSGSVPLARRVFDQICWRKETIT-WTSMIVAMAQHGLGEQAVVLFEEMVR 709
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP+ ++V VLSAC HAG VDK + + M ++ G+ P+ H+ CMVDL R+G L
Sbjct: 710 VGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLT 769
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA E I+ +P P V+ SLL AC N+DL E A KL ++P N + L+N+Y+
Sbjct: 770 EAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGAYSALANVYS 829
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D RI ++ D+ + K G S
Sbjct: 830 ACGRWNDAARIWKLRKDKGVKKETGFS 856
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 192/394 (48%), Gaps = 57/394 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +V+S+CA++ GR+VH +K+ S + +++ MY KCG A V
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAV 404
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ R++ +WN M++ GR E A+ +FE + +WN++I+G++Q G+
Sbjct: 405 FERMQ-VRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWNTIIAGYNQNGL 459
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A K F +M S + M P VTSVLSACA+L LK+GK+ H +++R + +
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519
Query: 188 ALISMYMKCGQPSWARRFFDQ------------------------------FEIKPD-DP 216
ALIS Y K G ARR DQ F+I + D
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
W AMI GY +NG+ + A+E+F M +PNS + AVLSAC ++D QI
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639
Query: 277 MDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWC 330
++ QE ++ + RSG + AR + ++ + T++ + S++ A
Sbjct: 640 -----AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT-WTSMIVAMAQ 693
Query: 331 HLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
H LGE+ + +EM +P++ T +LS
Sbjct: 694 H---GLGEQAVVLFEEMVRVGVKPDHITYVGVLS 724
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG----CLPCAHNVF 69
+ ++ C + + GR +H +K T + L+ Y G C A +F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271
Query: 70 QELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
++ RN TWN++++ +GR A +F + D +W MI G ++ G
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDR----DAVSWTIMIVGLNRSGR 327
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++A K F M S G PS +T+VLS+CA + A +G++ H V++ L+ +A +
Sbjct: 328 FWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANS 387
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG AR F++ +++ + WN M+S Y G E AV +F+ M + +
Sbjct: 388 VLYMYGKCGDAETARAVFERMQVR--SVSSWNVMVSLYTHQGRMELAVSMFENMVERSI- 444
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
S+ +++ G AL+ F+ M ++P
Sbjct: 445 ---VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEP 478
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 209/383 (54%), Gaps = 4/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +SA + + G+QVHG +K + D + TAL+DMY KCG V
Sbjct: 151 PDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRV 210
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E ++ + N ++AG+ N + +A+ LF G + + +W S+++ Q G
Sbjct: 211 FHE-SSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGR 269
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF MQS G+ P+ + VL A A+++AL G+ H +R D + +A
Sbjct: 270 DLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSA 329
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG+ AR FD + + WNAMI GY +G+ +AV++F MQ+ K K
Sbjct: 330 LVDMYAKCGKARHARTIFDAMPSR--NVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQK 387
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F VL AC AG ++ + F M G+ P+ EH+ CMV LLGRSG+LDEA +
Sbjct: 388 PDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYD 447
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI E+P EP ++ SLLG+C + N L E A KL ++EP N +V+LSNIYA
Sbjct: 448 LINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKM 507
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V R+R + + L K G S
Sbjct: 508 WDGVNRVRDEMKNMGLKKEKGCS 530
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 148/338 (43%), Gaps = 39/338 (11%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
R +H + D + ++L+ Y++ G A +VF + +N++ W+ +IAG
Sbjct: 35 LARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP-EKNVVGWSALIAGY 93
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
G +E A L E + G +P+ TWN ++SG ++ G +A +M S G P
Sbjct: 94 SARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDA 153
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
V+ LSA D+ + +GK+ HG+V++A D + TALI MY KCG+ R F
Sbjct: 154 TGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVF-- 211
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
E D A NA+++G RN + A+ +F V+ N S+ ++++ C G
Sbjct: 212 HESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDL 271
Query: 269 KALQIFTMMDDDFGLKPKQEHFGC-----------------------------------M 293
+A+ +F M G++P C +
Sbjct: 272 EAVDLFRTM-QSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSAL 330
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
VD+ + G+ AR + +P V +++++G H
Sbjct: 331 VDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMH 368
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSVT V+ A A++ L GR H +L+ D +G+ALVDMY KCG A
Sbjct: 286 EPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHART 345
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + SRN+++WN MI G ++G + A++LF + KPD T+ ++ SQ G
Sbjct: 346 IFDAMP-SRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAG 404
Query: 128 MRFEAFKLFEKMQS-TGMVPSLK---CVTSVL 155
+ E + F +MQ G+ P ++ C+ ++L
Sbjct: 405 LTEEGRRYFNEMQQGHGISPRMEHYACMVTLL 436
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/383 (38%), Positives = 214/383 (55%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SV +SV+SAC+ + VHG +K +G L+D Y KCG
Sbjct: 2123 DSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG--------- 2173
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q L S+ + W ME + D +WNSMI+ ++Q G+
Sbjct: 2174 QPLV-SKKVFDW----------------ME----------EKDDISWNSMIAVYAQSGLS 2206
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F M + G+ + +++VL ACA AL+ GK H VI+ DL + + T+
Sbjct: 2207 GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTS 2266
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KCG+ A++ FD+ +K + W AM++GYG +G + A++IF M + VK
Sbjct: 2267 IIDMYCKCGRVEMAKKTFDR--MKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV+VL+AC HAG V++ F M + ++P EH+GCMVDL GR+G L+EA
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ + +P V+ SLLGAC H N DLGE A KL E++P+N +V+LSN+YA GR
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W DV R+R ++ +RQL K PG S
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFS 2467
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/311 (32%), Positives = 168/311 (54%), Gaps = 9/311 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + TF VI AC + L + G+ VHG +K D + L+D Y KCG
Sbjct: 118 CQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTR 177
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF++++ RN+++W T+I+G++ G ++A +F+ + + + +W +MI+G+
Sbjct: 178 FALKVFEKMR-VRNVVSWTTVISGLISCGDLQEARRIFDEIPSK----NVVSWTAMINGY 232
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ EA +LF++MQ+ + P+ + S++ AC ++ L LG+ H + I+ +
Sbjct: 233 IRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGV 292
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDP-AFWNAMISGYGRNGEYESAVEIFDLM 242
+ TALI MY KCG A + FE P WN+MI+ G +G + A+ +F M
Sbjct: 293 YLGTALIDMYSKCGSIKDA---IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEM 349
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++ VKP++ +F+ VL AC H +V + FT M +G+ P EH+ CM +L RS
Sbjct: 350 ERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNN 409
Query: 303 LDEARELIREL 313
LDEA + +E+
Sbjct: 410 LDEAFKSTKEV 420
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 56/336 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +F I +C++L L GR H ++D + +AL+DMY KCG L A +
Sbjct: 2013 PTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARAL 2072
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W SMI+G+ Q
Sbjct: 2073 FDEIP-LRNVVSWT-----------------------------------SMITGYVQNEQ 2096
Query: 129 RFEAFKLFE-------KMQSTGMVPSLKCV-TSVLSACADLSALKLGKETHGHVIRADLN 180
A LF+ +++ VP V SVLSAC+ +S + + HG V++ +
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ L+ Y KCGQP +++ FD E K D WN+MI+ Y ++G A+E+F
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEK--DDISWNSMIAVYAQSGLSGEALEVFH 2214
Query: 241 -LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----MVD 295
+++ V+ N+ + AVL AC HAG AL+ + D +K E+ C ++D
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAG----ALRAGKCIHDQV-IKMDLEYNVCVGTSIID 2269
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ + GR++ A++ + E V + +++ H
Sbjct: 2270 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMH 2305
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 155/376 (41%), Gaps = 84/376 (22%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ C + +L RQ+H ++ +D ++ L+ +Y G + A +F +++
Sbjct: 33 LLQNCKNFKHL---RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP- 88
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
TWN +I +NG SE+A+ L++ + +G D T+
Sbjct: 89 CTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTF-------------------- 128
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
V+ AC + ++ LGK HG +I+ + D + LI Y KC
Sbjct: 129 ---------------PFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC 173
Query: 197 GQP----------------SW---------------ARRFFDQFEIKPDDPAFWNAMISG 225
G SW ARR FD EI + W AMI+G
Sbjct: 174 GHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD--EIPSKNVVSWTAMING 231
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y RN + E A+E+F MQ E + PN + V+++ AC G + I D+ +K
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI-----HDYAIKN 286
Query: 286 KQE---HFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
E + G ++D+ + G + +A E+ +P ++ ++S++ + H LG+E
Sbjct: 287 CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH---GLGQEAL 343
Query: 342 MKLQEMEPENPTPFVI 357
EME N P I
Sbjct: 344 NLFSEMERVNVKPDAI 359
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 16/210 (7%)
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
C N ++ G +T+N+++ G+ +GR + + L K + +WNS+I+
Sbjct: 1937 CVVNFYECFDG----ITYNSILFGVP-SGREDHS-NLATWFYKYVDKSNVHSWNSVIADL 1990
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
++ G EA + F ++ G++P+ + +C+ L L G+ +H D
Sbjct: 1991 ARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDL 2050
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLM 242
+++ALI MY KCGQ AR FD+ ++ + W +MI+GY +N + ++A+ +F D +
Sbjct: 2051 FVSSALIDMYSKCGQLKDARALFDEIPLR--NVVSWTSMITGYVQNEQADNALLLFKDFL 2108
Query: 243 QQE-------KVKPNSASFVAVLSACGHAG 265
++E V +S V+VLSAC
Sbjct: 2109 EEETEVEDGNNVPLDSVVMVSVLSACSRVS 2138
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFG-RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+PN +TF+SV++AC+ ++ G + + K + + +VD++ + GCL A+
Sbjct: 2324 KPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAY 2383
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
N+ + +K + + W +++ R K ++L E A + F+ DP
Sbjct: 2384 NLIKRMKMKPDFVVWGSLLGAC----RIHKNVDLGEIAAQKLFELDP 2426
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 50/241 (20%)
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKC-----------GQPS---------- 200
+ KL K+ G A L++ S+ +++ Y +C G PS
Sbjct: 1911 TTTKLDKDEKGSYPYACLSESPSIYVCVVNFY-ECFDGITYNSILFGVPSGREDHSNLAT 1969
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
W ++ D+ + WN++I+ R G+ A+ F +++ + P +SF + +
Sbjct: 1970 WFYKYVDKSNVHS-----WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKS 2024
Query: 261 C--------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
C G H Q F FG + ++D+ + G+L +AR L E
Sbjct: 2025 CSALCDLVSGRMSH----QQAFV-----FGFETDLFVSSALIDMYSKCGQLKDARALFDE 2075
Query: 313 LPEPTVSVYHSLLGACWCHLNSD----LGEEMAMKLQEMEPENPTPF--VILSNIYAGLG 366
+P V + S++ + +D L ++ + E+E N P V++ ++ +
Sbjct: 2076 IPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACS 2135
Query: 367 R 367
R
Sbjct: 2136 R 2136
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 210/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++ S ISACA + ++ G+Q+H +D I ALV++Y +CG
Sbjct: 444 PDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCG-------- 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
RS++A LFE + H+ D TWN M+SGF+Q G+
Sbjct: 496 ------------------------RSKEAFSLFEAIEHK----DKITWNGMVSGFAQSGL 527
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F KM G+ ++ S +SA A+L+ +K GK+ H VI+ + +A A
Sbjct: 528 YEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANA 587
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LIS+Y KCG A+ F FE+ + WN +I+ ++G A+++FD M+QE +K
Sbjct: 588 LISLYGKCGSIEDAKMQF--FEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLK 645
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL+AC H G V++ L F M + G+ P+ +H+ C+VD+LGR+G+LD AR+
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARK 705
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+P V+ +LL AC H N ++GE A L E+EP + +V+LSN YA G+
Sbjct: 706 FVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGK 765
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +R+M+ DR + K PG S
Sbjct: 766 WACRDHVRKMMKDRGVRKEPGRS 788
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 177/385 (45%), Gaps = 47/385 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ ++ C + G Q+H L++K +SD + L+DMY K G L A
Sbjct: 342 RPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARR 401
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + L+ D +W SMI+G+ Q
Sbjct: 402 ILEVLEAK------------------------------------DVVSWTSMIAGYVQHE 425
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F+ MQ G+ P + S +SACA + A++ G++ H V + + D S+
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWN 485
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y +CG+ A F+ E K D WN M+SG+ ++G YE A+E+F M Q V
Sbjct: 486 ALVNLYARCGRSKEAFSLFEAIEHK--DKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K N +FV+ +SA + + + QI + G + E ++ L G+ G +++A+
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETEVANALISLYGKCGSIEDAK 602
Query: 308 ELIRELPEPTVSVYHSLLGAC----WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI-Y 362
E+ E +++++ +C W DL ++ MK + ++P + T +L+ +
Sbjct: 603 MQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQ--MKQEGLKPNDVTFIGVLAACSH 660
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLP 387
GL E +G + M ++ + P
Sbjct: 661 VGLVE-EGLGYFKSMSSEHGIHPRP 684
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 39/324 (12%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
C P SV+SAC + GR VH K S+T++G AL+ +YL+ G L
Sbjct: 135 HCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSL 194
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ D T+N++IS
Sbjct: 195 SLAERVFSEMP------------------------------------YCDRVTFNTLISR 218
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+Q G A ++FE+M+ +G P + S+L+ACA + L GK+ H ++++A ++ D
Sbjct: 219 HAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPD 278
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +L+ +Y+KCG A F + + WN M+ YG+ + + ++F M
Sbjct: 279 YIIEGSLLDLYVKCGVIVEALEIFKSGD--RTNVVLWNLMLVAYGQISDLAKSFDLFCQM 336
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V+PN ++ +L C +AG ++ QI ++ G + G ++D+ + G
Sbjct: 337 VAAGVRPNEFTYPCLLRTCTYAGEINLGEQIH-LLSIKTGFESDMYVSGVLIDMYSKYGW 395
Query: 303 LDEARELIRELPEPTVSVYHSLLG 326
LD+AR ++ L V + S++
Sbjct: 396 LDKARRILEVLEAKDVVSWTSMIA 419
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%), Gaps = 40/318 (12%)
Query: 11 SVTFISVISAC-ASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
SV F + C S+ + +H + D + G L+D+Y K G + A VF
Sbjct: 41 SVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVF 100
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++L N+ +W +M+SG+++ G+
Sbjct: 101 EQLSARDNV------------------------------------SWVAMLSGYARNGLG 124
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA L+ +M +G+VP+ ++SVLSAC + + G+ H V + + + AL
Sbjct: 125 EEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNAL 184
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I++Y++ G S A R F E+ D +N +IS + + G ESA+EIF+ M+ P
Sbjct: 185 IALYLRFGSLSLAERVFS--EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTP 242
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + ++L+AC G ++K Q+ + + G+ P G ++DL + G + EA E+
Sbjct: 243 DCVTIASLLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEI 301
Query: 310 IRELPEPTVSVYHSLLGA 327
+ V +++ +L A
Sbjct: 302 FKSGDRTNVVLWNLMLVA 319
>gi|42562381|ref|NP_174190.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806502|sp|Q1PFQ9.2|PPR62_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g28690, mitochondrial; Flags: Precursor
gi|332192893|gb|AEE31014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 520
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 10/363 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH +K + + D ++ TALVD Y+K G L A VF+ +K N++ +MI+G M
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMN 218
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLK 149
G E A E+F + D +N+M+ GFS+ G + + ++ MQ G P++
Sbjct: 219 QGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ AC+ L++ ++G++ H ++++ + M ++L+ MY KCG + ARR FDQ
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K + W +MI GYG+NG E A+E+F M++ +++PN +F+ LSAC H+G VDK
Sbjct: 335 QEK--NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGAC 328
+IF M D+ +KPK EH+ C+VDL+GR+G L++A E R +PE P ++ +LL +C
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 329 WCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
H N +L A +L ++ + P ++ LSN+YA +W++V +IR+++ R+++K
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 388 GIS 390
G S
Sbjct: 513 GRS 515
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K Q D I L+ ++LKCGCL A VF EL + +N MI+G +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKP-TLSAYNYMISGYL 111
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G ++ + L + +++ G K D T + ++ + G ST ++P
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG-------------STMILPRSL 158
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C + H +I+ D+ D+ + TAL+ Y+K G+ AR F+
Sbjct: 159 C-----------------RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 210 E-----------------------------IKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ K D +NAM+ G+ R+GE + +V+++
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+ PN ++F +V+ AC + Q+ + G+ + ++D+ +
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAK 320
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
G +++AR + ++ E V + S++ + N + E+ +++E E
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 15/246 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SVI AC+ L + G+QVH +K + +G++L+DMY KCG + A V
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ +N+ +W +MI G NG E+A+ELF + +P+ T+ +S S G+
Sbjct: 331 FDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ +++FE MQ M P ++ C+ ++ DL+ A + + D
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER-------PDS 442
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDD-PAFWNAMISGYGRNGEYESAVEIFDL 241
+ AL+S G A + F++ D P + A+ + Y N ++++ +I ++
Sbjct: 443 DIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREV 502
Query: 242 MQQEKV 247
M++ ++
Sbjct: 503 MKRRRI 508
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ F Q+ + K + L + A K GK+ H +I+ D +++ L+ +
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 78
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG S+AR+ FD+ KP A+ N MISGY ++G + + + M K +
Sbjct: 79 HLKCGCLSYARQVFDELP-KPTLSAY-NYMISGYLKHGLVKELLLLVQRMSYSGEKADGY 136
Query: 253 SFVAVLSACGHAGHV------------DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ VL A G + ++ +DD +VD +S
Sbjct: 137 TLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL--------ITALVDTYVKS 188
Query: 301 GRLDEARELIRELPEPTV 318
G+L+ AR + + + V
Sbjct: 189 GKLESARTVFETMKDENV 206
>gi|116830928|gb|ABK28420.1| unknown [Arabidopsis thaliana]
Length = 521
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 10/363 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH +K + + D ++ TALVD Y+K G L A VF+ +K N++ +MI+G M
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMN 218
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLK 149
G E A E+F + D +N+M+ GFS+ G + + ++ MQ G P++
Sbjct: 219 QGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 274
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ AC+ L++ ++G++ H ++++ + M ++L+ MY KCG + ARR FDQ
Sbjct: 275 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 334
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K + W +MI GYG+NG E A+E+F M++ +++PN +F+ LSAC H+G VDK
Sbjct: 335 QEK--NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 392
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGAC 328
+IF M D+ +KPK EH+ C+VDL+GR+G L++A E R +PE P ++ +LL +C
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Query: 329 WCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
H N +L A +L ++ + P ++ LSN+YA +W++V +IR+++ R+++K
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 388 GIS 390
G S
Sbjct: 513 GRS 515
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K Q D I L+ ++LKCGCL A VF EL + +N MI+G +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKP-TLSAYNYMISGYL 111
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G ++ + L + +++ G K D T + ++ + G ST ++P
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG-------------STMILPRSL 158
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C + H +I+ D+ D+ + TAL+ Y+K G+ AR F+
Sbjct: 159 C-----------------RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 201
Query: 210 E-----------------------------IKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ K D +NAM+ G+ R+GE + +V+++
Sbjct: 202 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 261
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+ PN ++F +V+ AC + Q+ + G+ + ++D+ +
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAK 320
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
G +++AR + ++ E V + S++ + N + E+ +++E E
Sbjct: 321 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 123/246 (50%), Gaps = 15/246 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SVI AC+ L + G+QVH +K + +G++L+DMY KCG + A V
Sbjct: 271 PNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRV 330
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ +N+ +W +MI G NG E+A+ELF + +P+ T+ +S S G+
Sbjct: 331 FDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGL 389
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ +++FE MQ M P ++ C+ ++ DL+ A + + D
Sbjct: 390 VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER-------PDS 442
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDD-PAFWNAMISGYGRNGEYESAVEIFDL 241
+ AL+S G A + F++ D P + A+ + Y N ++++ +I ++
Sbjct: 443 DIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREV 502
Query: 242 MQQEKV 247
M++ ++
Sbjct: 503 MKRRRI 508
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ F Q+ + K + L + A K GK+ H +I+ D +++ L+ +
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 78
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG S+AR+ FD+ KP A+ N MISGY ++G + + + M K +
Sbjct: 79 HLKCGCLSYARQVFDELP-KPTLSAY-NYMISGYLKHGLVKELLLLVQRMSYSGEKADGY 136
Query: 253 SFVAVLSACGHAGHV------------DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ VL A G + ++ +DD +VD +S
Sbjct: 137 TLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL--------ITALVDTYVKS 188
Query: 301 GRLDEARELIRELPEPTV 318
G+L+ AR + + + V
Sbjct: 189 GKLESARTVFETMKDENV 206
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 211/386 (54%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++VISA A ++ GRQVH S+ I AL+D Y KCG +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEM------ 246
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A LF GL+++ D +WN +I G++ L +
Sbjct: 247 --------------------------ETACGLFLGLSYK----DVISWNILIGGYTHLNL 276
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESMA 186
EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + + S+
Sbjct: 277 YKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 336
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T+LI MY KCG A + F+ + PA WNAMI G+ +G +A +IF M++ +
Sbjct: 337 TSLIDMYSKCGDIEAAHQVFNSM-LHKSLPA-WNAMIFGFAMHGRANAAFDIFSRMRKNE 394
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+ +FV +LSAC HAG +D IF M ++ + PK EH+GCM+DLLG SG EA
Sbjct: 395 IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEA 454
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+I + EP ++ SLL AC H N +LGE+ A L ++EP NP +V+LSNIYA
Sbjct: 455 EEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATA 514
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V RIR ++ND+ + K+PG S+
Sbjct: 515 GRWNEVARIRGLLNDKGMKKVPGCSS 540
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 188/382 (49%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA L + G Q+HG LK+ + D + T+L+ MY++ L AH V
Sbjct: 61 PNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKV 120
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ ++ G G E A +F+ + D +WN+MISG+ + G
Sbjct: 121 FDR-SSHRDVVSYTALVTGYASRGYIESARNMFDEIP----VKDVVSWNAMISGYVETGN 175
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + +V+SA A +++LG++ H + + + A
Sbjct: 176 YKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNA 235
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI Y KCG+ A F K D WN +I GY Y+ A+ +F M +
Sbjct: 236 LIDFYSKCGEMETACGLFLGLSYK--DVISWNILIGGYTHLNLYKEALLLFQEMLRSGES 293
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G +D I +D G+ ++D+ + G ++ A
Sbjct: 294 PNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAH 353
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++ +++++ H ++ ++ M+ E++P++ T +LS +AG
Sbjct: 354 QVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAG 413
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M ++ ++T
Sbjct: 414 M---LDLGRHIFRSMTHNYKIT 432
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 74/363 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N+L WNTM G L+ PDP +
Sbjct: 13 LPYAISVFETIQ-EPNLLIWNTMFRGHALS-------------------PDPVS------ 46
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA L A K G + HGHV++
Sbjct: 47 ----------ALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYEL 96
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY++ + A + FD+ EI
Sbjct: 97 DLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIP 156
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMISGY G Y+ A+E+F M + V+P+ ++ V V+SA +G ++ Q
Sbjct: 157 VKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQ 216
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + + D G + ++D + G ++ A L L V ++ L+G + HL
Sbjct: 217 VHSWIADH-GFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGG-YTHL 274
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNIY--AGLGRWEDVGRIRQMINDRQLTKLPG 388
N L +E + QEM E+P +LS ++ A LG D+GR + D++L +
Sbjct: 275 N--LYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI-DIGRWIHVYIDKRLKGVTN 331
Query: 389 ISA 391
S+
Sbjct: 332 ASS 334
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 140/322 (43%), Gaps = 34/322 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 292 ESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEA 351
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ WN MI G ++GR+ A ++F + KPD T+ ++S S
Sbjct: 352 AHQVFNSML-HKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACS 410
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +F M + + P L+ C+ +L L KE + +
Sbjct: 411 HAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSG------LFKEAEEMISTMTME 464
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G +F F+I+P++P + + + Y G + I
Sbjct: 465 PDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIR 524
Query: 240 DLMQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD-- 295
L+ + +K P +S +D + F + D P+ M++
Sbjct: 525 GLLNDKGMKKVPGCSSI-----------EIDSVVHEFIIGDK---FHPRNREIYGMLEEM 570
Query: 296 --LLGRSGRLDEARELIRELPE 315
LL +G + + E+++E+ E
Sbjct: 571 EVLLQEAGFVPDTSEVLQEMEE 592
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 211/382 (55%), Gaps = 40/382 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQ-SDTMIGTALVDMYLKCGCLPCAHNVFQ 70
+TF S++ AC L GRQ+H L LK+ Q D +G +L+ MY+
Sbjct: 630 ITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYM------------- 676
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT-WNSMISGFSQLGMR 129
N++ R+ A LF ++ P A W +MISG SQ
Sbjct: 677 -----------NSL--------RTTDASVLFSEFSN----PKSAVVWTAMISGLSQNDCS 713
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A +L+++M+S ++P S L ACA +S++K G ETH + + DE ++AL
Sbjct: 714 VVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSAL 773
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG + + F + K D + WN+MI G+ +NG E A+ +FD M+Q V P
Sbjct: 774 VDMYAKCGDVKSSMQVFKEMSRKKDVIS-WNSMIVGFAKNGYAEDALRVFDEMKQSHVTP 832
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VL+AC H+G V + IF MM + +G++P+ +H CMVDLLGR G L EA E
Sbjct: 833 DDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEF 892
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +L EP V+ ++LGAC H + G++ A KL E+EP+N +P+V+LSNIYA G W
Sbjct: 893 INKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNW 952
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
++V +R+ + ++ + KLPG S
Sbjct: 953 DEVNTLRREMREKGVKKLPGCS 974
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 170/341 (49%), Gaps = 46/341 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V+S+CA L ++ GRQVH +K+ +S + AL+ MY KC L A ++
Sbjct: 158 PNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSI 217
Query: 69 FQELKGSRNI--LTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT----------- 115
F G+ + ++W +MI G + G E+A+++F+ + G +PD
Sbjct: 218 FD---GAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDL 274
Query: 116 --------------------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
WN MISG ++ G EA + F+ M+ G+ + + SVL
Sbjct: 275 GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVL 334
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
SA A L+AL G H ++ L+ + + ++L+SMY KCG+ A++ FD + +
Sbjct: 335 SAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDT--LNEQN 392
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WNAM+ GY +NG +E+F M+ P+ ++ ++LSAC ++D Q+ +
Sbjct: 393 VVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHS 452
Query: 276 MMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAR---ELIR 311
++ + K F +VD+ +SG L++AR ELIR
Sbjct: 453 VIIKN---KFASNLFVGNALVDMYAKSGALEDARQQFELIR 490
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 41/315 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV+SA ASL L FG VH LK S+ +G++LV MY KCG + A VF L
Sbjct: 329 TLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTL 388
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+N++ WN M+ G + NG + + MELF + GF PD T+
Sbjct: 389 N-EQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTY---------------- 431
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+S+LSACA L L LG + H +I+ + + AL+ M
Sbjct: 432 -------------------SSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDM 472
Query: 193 YMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y K G AR+ QFE I+ D WN +I GY + + A +F M + P+
Sbjct: 473 YAKSGALEDARQ---QFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDE 529
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
S ++LSAC +++ Q+ + G + K ++D+ + G +D A +++
Sbjct: 530 VSLASILSACASVRGLEQGKQVHC-LSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILA 588
Query: 312 ELPEPTVSVYHSLLG 326
+PE +V ++L+
Sbjct: 589 CMPERSVVSMNALIA 603
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 157/363 (43%), Gaps = 60/363 (16%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MK C P+ T+ S++SACA L YL G Q+H + +K + S+ +G ALVDMY K G
Sbjct: 419 MKSC-GFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSG 477
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A F+ ++ N+ +WN +I
Sbjct: 478 ALEDARQQFELIRNRDNV------------------------------------SWNVII 501
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q EAF LF +M G++P + S+LSACA + L+ GK+ H ++
Sbjct: 502 VGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQE 561
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIF 239
++LI MY KCG A + P+ NA+I+GY + E AV +F
Sbjct: 562 TKLYSGSSLIDMYAKCGAIDSAHKI---LACMPERSVVSMNALIAGYAQIN-LEQAVNLF 617
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG- 298
M E + +F ++L AC ++ QI +++ GL+ E G V LLG
Sbjct: 618 RDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLI-LKMGLQLDDEFLG--VSLLGM 674
Query: 299 --RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE----MAMKL-QEMEPEN 351
S R +A L E P +V W + S L + +A++L +EM N
Sbjct: 675 YMNSLRTTDASVLFSEFSNPKSAV-------VWTAMISGLSQNDCSVVALQLYKEMRSCN 727
Query: 352 PTP 354
P
Sbjct: 728 VLP 730
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 153/360 (42%), Gaps = 54/360 (15%)
Query: 33 VHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNG 92
+H +LK+ S ++G +VD+Y KC + A F++L+
Sbjct: 81 IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLE------------------- 121
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
D WNS++S S+ G K F + ++G+ P+
Sbjct: 122 -----------------DKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFA 164
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD-QFEI 211
VLS+CA L +K G++ H +V++ ALI MY KC + AR FD E+
Sbjct: 165 IVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVEL 224
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
D W +MI GY + G E AV++F M++ +P+ +FV V++A G +D A
Sbjct: 225 ---DKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNAS 281
Query: 272 QIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+F+ M P + + M+ + G EA E + + + + S LG+
Sbjct: 282 DLFSRM-------PNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVL 334
Query: 330 CHLNS----DLGEEM-AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
+ S D G + A L++ N L ++YA G+ E ++ +N++ +
Sbjct: 335 SAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVV 394
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF+S + ACA + ++ G + H L SD + +ALVDMY KCG + + V
Sbjct: 730 PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQV 789
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ +++++WN+MI G NG +E A+ +F+ + PD T+ +++ S G
Sbjct: 790 FKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGR 849
Query: 129 RFEAFKLFEKMQS-TGMVP 146
E +F+ M + GM P
Sbjct: 850 VSEGRLIFDMMVNLYGMQP 868
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 10/221 (4%)
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
K H ++ + ++ +Y KC +A R F Q E K D WN+++S +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDK--DILAWNSILSMHS 136
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ G V+ F L+ V PN +F VLS+C V Q+ + G +
Sbjct: 137 KQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNV-VKMGFESIS 195
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
G ++ + + L +AR + E + S++G ++ L EE QEM
Sbjct: 196 YCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGG---YIKVGLPEEAVKVFQEM 252
Query: 348 EPENPTP----FVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
E P FV + N Y LGR ++ + + +R +
Sbjct: 253 EKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVV 293
>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Glycine max]
Length = 611
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 214/387 (55%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
P+ F S++ ACA+L L+++ G+QVH D ++ ++L+DMY K G
Sbjct: 101 HPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYG 160
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + S N ++W TMI+G +GR +A LF + W ++ISG Q
Sbjct: 161 RAVFDSI-SSLNSISWTTMISGYARSGRKFEAFRLFRQTPYRNL----FAWTALISGLVQ 215
Query: 126 LGMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G +AF LF +M+ G+ V ++SV+ ACA+L+ +LGK+ HG VI
Sbjct: 216 SGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLF 275
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ ALI MY KC A+ F E+ D W ++I G ++G+ E A+ ++D M
Sbjct: 276 ISNALIDMYAKCSDLVAAKYIF--CEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVL 333
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKPN +FV ++ AC HAG V K +F M +D G+ P +H+ C++DL RSG LD
Sbjct: 334 AGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLD 393
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA LIR +P P + +LL +C H N+ + +A L ++PE+P+ +++LSNIYA
Sbjct: 394 EAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNLKPEDPSSYILLSNIYA 453
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G G WEDV ++R+++ + K PG S
Sbjct: 454 GAGMWEDVSKVRKLMMTLEAKKAPGYS 480
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 44/251 (17%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
+++H +K I L++ Y KCG + A +F L R+ + W +++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALP-RRDPVAWASLLTAC 79
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
L+ R +A+ + L GF PD + S++
Sbjct: 80 NLSNRPHRALSISRSLLSTGFHPDHFVFASLV---------------------------- 111
Query: 149 KCVTSVLSACADLSAL--KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
ACA+L L K GK+ H + + D+ + ++LI MY K G P + R F
Sbjct: 112 -------KACANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVF 164
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D I + W MISGY R+G E F L +Q + N ++ A++S +G+
Sbjct: 165 D--SISSLNSISWTTMISGYARSGR---KFEAFRLFRQTPYR-NLFAWTALISGLVQSGN 218
Query: 267 VDKALQIFTMM 277
A +F M
Sbjct: 219 GVDAFHLFVEM 229
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 95/241 (39%), Gaps = 42/241 (17%)
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
L K+ H +I+A LN+ E + L++ Y KCG A + FD + DP W ++++
Sbjct: 21 LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRR--DPVAWASLLTA 78
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMM------ 277
+ A+ I + P+ F +++ AC + G HV + Q+
Sbjct: 79 CNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFS 138
Query: 278 DDD------------FGLKP------------KQEHFGCMVDLLGRSGRLDEARELIREL 313
DDD FGL + M+ RSGR EA L R+
Sbjct: 139 DDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQT 198
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIY---AGLGRW 368
P + + +L+ + S G + EM E + T ++LS++ A L W
Sbjct: 199 PYRNLFAWTALISGL---VQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALW 255
Query: 369 E 369
E
Sbjct: 256 E 256
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 75/154 (48%), Gaps = 18/154 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQV-------HGLTLKIEKQSDTMIGTALVDMYLKCG 60
+PN VTF+ +I AC+ + GR + HG++ ++ T L+D++ + G
Sbjct: 337 KPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQHY------TCLLDLFSRSG 390
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP-DPATWNSM 119
L A N+ + + + + TW +++ +G ++ A+ + + L + KP DP+++ +
Sbjct: 391 HLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLN--LKPEDPSSYILL 448
Query: 120 ISGFSQLGMRFEAFKLFEKMQS--TGMVPSLKCV 151
+ ++ GM + K+ + M + P C+
Sbjct: 449 SNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCI 482
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 221/386 (57%), Gaps = 10/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F+ SAC + L +Q G QV +K+ +++ + AL+ MY K G + + V
Sbjct: 113 PNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKV 172
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ R++ +WNT+IA + +G A ELF+G+ D +W+++I+G+ Q+G
Sbjct: 173 FQ-WAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRER----DVVSWSTIIAGYVQVGC 227
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F KM G P+ + S L+AC++L AL GK H ++ + ++ +E + +
Sbjct: 228 FMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLAS 287
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KCG+ A R F + ++K WNAMI G+ +G A+ +F+ M+ EK+
Sbjct: 288 IIDMYAKCGEIESASRVFFEHKVK-QKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKIS 346
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+A+L+AC H V++ F +M D+ + P+ EH+GCMVDLL RSG L EA +
Sbjct: 347 PNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAED 406
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P V+++ +LL AC + + + G + ++ M+P + V+LSNIY+ GR
Sbjct: 407 MISSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKGMDPNHIGCHVLLSNIYSTSGR 466
Query: 368 WEDVGRIRQMIND--RQLTKLPGISA 391
W + RI + N+ R K+PG S+
Sbjct: 467 WNE-ARILREKNEISRDRKKIPGCSS 491
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T +S ++AC++L+ L G+ +H K E + + + +++DMY KCG + A
Sbjct: 244 KPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASR 303
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E K + + WN MI G ++G +A+ +FE + E P+ T+ ++++ S G
Sbjct: 304 VFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSH-G 362
Query: 128 MRFEAFKLFEKMQST--GMVPSLK---CVTSVLS 156
E KL+ ++ + + P ++ C+ +LS
Sbjct: 363 YMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLS 396
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/406 (19%), Positives = 153/406 (37%), Gaps = 77/406 (18%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+S+I +C S+ Q +Q H + S + L+ + C L AH +F ++
Sbjct: 19 LVSLIDSCKSM---QQIKQTHAQLITTALISHPVSANKLLKL-AACASLSYAHKLFDQIP 74
Query: 74 GSRNILTWNTMIAGMMLNGRS-EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ +NTMI L+ S ++ +F L
Sbjct: 75 -QPDLFIYNTMIKAHSLSPHSCHNSLIVFRSLT--------------------------- 106
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
Q G+ P+ SAC + ++ G++ H ++ L + + ALI M
Sbjct: 107 -------QDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGM 159
Query: 193 YMK-------------------------------CGQPSWARRFFDQFEIKPDDPAFWNA 221
Y K G S A+ FD ++ D W+
Sbjct: 160 YGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDG--MRERDVVSWST 217
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+I+GY + G + A++ F M Q KPN + V+ L+AC + +D+ I +
Sbjct: 218 IIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKG- 276
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEA-RELIRELPEPTVSVYHSLLGACWCH--LNSDLGE 338
+K + ++D+ + G ++ A R + V ++++++G H N +
Sbjct: 277 EIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMPNEAINV 336
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
MK++++ P T +L+ G E R M++D +T
Sbjct: 337 FEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLMVSDYAIT 382
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 212/383 (55%), Gaps = 41/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT + ++ C YL GR +HG +K S+ + + + MY+KCG + +F
Sbjct: 152 DSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLF 211
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ + G++ TWN++ISG+SQ G+
Sbjct: 212 DEMP-----------VKGLI-------------------------TWNAVISGYSQNGLA 235
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
++ +LFE+M+S+G+ P + SVLS+CA L A K+G+E G ++ A+ + ++ A
Sbjct: 236 YDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEV-GELVEANGFAPNVFLSNA 294
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY +CG + AR FD +K W AMI YG +G E+ + +FD M + ++
Sbjct: 295 LISMYARCGNLAKARAVFDIMPVK--SLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIR 352
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ A FV VLSAC H+G DK L++F M ++ L+P EH+ C+VDLLGR+GRLDEA E
Sbjct: 353 PDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAME 412
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P EP +V+ +LLGAC H N D+ E K+ E EP N +V++SNIY+
Sbjct: 413 FIDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKN 472
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
E + RIR M+ +R K PG S
Sbjct: 473 QEGIWRIRVMMRERAFRKKPGYS 495
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 12/251 (4%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
+WN + + + E+ L+ M +G P +L +CA LS G++ H H
Sbjct: 16 TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
VIR + + TALISMY KCG AR+ F++ +NA+ISGY N +
Sbjct: 76 VIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVS 135
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQEHF 290
A +F M++ V +S + + ++ C V + L + + + G +
Sbjct: 136 DAAFMFRRMKETGVSVDSVTILGLVPLCT----VPEYLWLGRSLHGECVKGGTYSEVAVL 191
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+ + + G ++ R L E+P + +++++ + + L ++ ++M+
Sbjct: 192 NSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISG---YSQNGLAYDVLELFEQMKSS 248
Query: 351 N--PTPFVILS 359
P PF ++S
Sbjct: 249 GVCPDPFTLVS 259
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 151/358 (42%), Gaps = 48/358 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +SV+S+CA L + G++V L + + AL+ MY +CG L A V
Sbjct: 252 PDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAV 311
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +++++W MI ++G E + LF+ + G +PD A + ++S S G+
Sbjct: 312 F-DIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGL 370
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +LF M+ L+ G E + +
Sbjct: 371 TDKGLELFRAMKRE-------------------YKLEPGPEHY---------------SC 396
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKV 247
L+ + + G+ A F D ++PD A W A++ + + A F +++ E +
Sbjct: 397 LVDLLGRAGRLDEAMEFIDSMPVEPDG-AVWGALLGACKIHKNVDMAELAFAKVIEFEPM 455
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDD-FGLKPKQ---EHFGCMVDLLGRSGRL 303
N +V + + + + + +I MM + F KP EH G + L
Sbjct: 456 --NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGKVHLFLAGDRSH 513
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
++ E+ R L E SV L G +++ D GEE++ +E F IL++I
Sbjct: 514 EQTEEVHRMLDELETSVME-LAG----NMDCDRGEEVSSTTREHSERLAIAFGILNSI 566
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 219/382 (57%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ TF ++ AC++L L Q+H +K S+ +L+ +Y G + AH +F
Sbjct: 110 NAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLF 169
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+L SR+I++WNTMI G + G E A ++F+ + + + +W SMI GF + GM
Sbjct: 170 -DLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMP----EKNVISWTSMIVGFVRTGMH 224
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA L ++M G+ P ++ LSACA L AL+ GK H ++ + + D + AL
Sbjct: 225 KEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCAL 284
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY+KCG+ A F + E K W A+I G+ +G+ A++ F MQ+ +KP
Sbjct: 285 IDMYVKCGEMKKALLVFSKLEKKCVYT--WTAIIGGFAVHGKGSEALDWFTQMQKAGIKP 342
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
S +F AVL+AC H G V++ +F M + +KP EH+GCMVDLLGR+G L EA+E
Sbjct: 343 TSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEF 402
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ +P +P +++ SLL AC H + +LG+E+ L E++PE+ ++ L++I+A G W
Sbjct: 403 VESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAAGEW 462
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
++ ++R I ++ L LPG S
Sbjct: 463 DEASQVRSHIKNKGLLNLPGCS 484
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T +SACA L L+ G+ +H K + + D ++G AL+DMY+KCG + A
Sbjct: 240 KPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALL 299
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L+ + + TW +I G ++G+ +A++ F + G KP T+ ++++ S G
Sbjct: 300 VFSKLE-KKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTG 358
Query: 128 MRFEAFKLFEKMQS 141
+ E LFE M +
Sbjct: 359 LVEEGKSLFESMST 372
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 140/322 (43%), Gaps = 19/322 (5%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMY--LKCGCLPCAHNVFQEL 72
+S++ C+++ L +Q+HG LK + + L+ Y ++ L A VF +
Sbjct: 15 MSLLERCSNIGEL---KQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRI 71
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
S N + WNTMI + E+A+ L+ + H + T+ ++ S L E
Sbjct: 72 -SSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAET 130
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDESMATALIS 191
++ ++ G + S+L A ++K HV+ L ++D +I
Sbjct: 131 HQIHVQIIKRGFGSEVYATNSLLRVYAISGSIK-----SAHVLFDLLPSRDIVSWNTMID 185
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y+KCG A + F K + W +MI G+ R G ++ A+ + M +KP+
Sbjct: 186 GYIKCGNVEMAYKIFQAMPEK--NVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDK 243
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGC-MVDLLGRSGRLDEAREL 309
+ LSAC G +++ I T + + + P GC ++D+ + G + +A +
Sbjct: 244 ITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPV---LGCALIDMYVKCGEMKKALLV 300
Query: 310 IRELPEPTVSVYHSLLGACWCH 331
+L + V + +++G H
Sbjct: 301 FSKLEKKCVYTWTAIIGGFAVH 322
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 88/201 (43%), Gaps = 14/201 (6%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY--MKCGQPSWARRFFDQFE 210
S+L C+++ LK + HG +++ + + + L++ Y M+ ++AR FD+
Sbjct: 16 SLLERCSNIGELK---QIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDR-- 70
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
I + WN MI Y + + E A+ ++ M + N+ +F +L AC + +
Sbjct: 71 ISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAET 130
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL-GACW 329
QI + G + ++ + SG + A L LP + +++++ G
Sbjct: 131 HQIHVQIIKR-GFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIK 189
Query: 330 CHLNSDLGEEMAMKLQEMEPE 350
C EMA K+ + PE
Sbjct: 190 CG-----NVEMAYKIFQAMPE 205
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 201/386 (52%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +T +S++ AC L L G + G ++ E ++ +G+AL+ MY KCG L A
Sbjct: 224 EPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARR 283
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + K D TWN+MI+G++Q G
Sbjct: 284 VFDRM------------------------------------VKKDVVTWNAMITGYAQNG 307
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF M+ +G+ P + VLSACA + AL GK + L D ++T
Sbjct: 308 VSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVST 367
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-- 245
ALI MY KCG A R F+ K + WNAMIS +G + ++ +F M +E
Sbjct: 368 ALIDMYAKCGSLDDALRVFEDMPQK--NEVSWNAMISALAFHGRPQESLSLFKRMSKEGG 425
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+PN SF+ VLSAC HAG VD+ Q+F +M FGL PK EH CMVDLL R+G + E
Sbjct: 426 AVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHE 485
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + I ++PE P V +LLGAC N D+ E + L EMEP N ++I S I+A
Sbjct: 486 AWDFIEKMPEKPDEVVLGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFAN 545
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+ RW+D R+R ++ R +TK PG S
Sbjct: 546 MKRWDDSARMRVLMRQRGVTKTPGCS 571
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 159/324 (49%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+ T+ V ACA+LL L G+ H LK +D + +L+ MY +CG L CA
Sbjct: 123 RPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARR 182
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ SEK D +WNSMISG+S++G
Sbjct: 183 VFDEI---------------------SEK---------------DLVSWNSMISGYSRMG 206
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M+ G P + S+L AC DL L LG G V+ +++ + + +
Sbjct: 207 YAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGS 266
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG S ARR FD+ K D WNAMI+GY +NG + A+ +F M++ V
Sbjct: 267 ALIGMYGKCGDLSSARRVFDRMVKK--DVVTWNAMITGYAQNGVSDEAIILFSGMRESGV 324
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V VLSAC G +D + T + GL+ ++D+ + G LD+A
Sbjct: 325 NPDKITLVGVLSACASIGALDFGKWLDTYASER-GLQNDIYVSTALIDMYAKCGSLDDAL 383
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ ++P+ +++++ A H
Sbjct: 384 RVFEDMPQKNEVSWNAMISALAFH 407
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 111 PDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P+ +N MI G + +F + + +M+ G+ P+ V ACA+L L G+
Sbjct: 88 PNEYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQC 147
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V+++ L D + +LI+MY +CG+ ARR FD EI D WN+MISGY R
Sbjct: 148 AHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFD--EISEKDLVSWNSMISGYSRM 205
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G AV +F M+ +P+ + V++L ACG G D GL E
Sbjct: 206 GYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLG--------------DLGLGSWIEG 251
Query: 290 F-------------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
F ++ + G+ G L AR + + + V +++++
Sbjct: 252 FVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMI 300
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 219/407 (53%), Gaps = 39/407 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS + SV+ A + L +L G++ HG L+ D +GT+L+DMY+K L A
Sbjct: 367 KPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQA 426
Query: 68 VFQELKGSRNI-----------------------------------LTWNTMIAGMMLNG 92
VF +K +RNI +TWN MI+G + G
Sbjct: 427 VFDNMK-NRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWG 485
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++A+ + G P+ +W ++ISG SQ G ++ K F +MQ G++P+ +T
Sbjct: 486 CGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASIT 545
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+L ACA LS L+ GKE H IR +D +ATALI MY K A + F + I+
Sbjct: 546 CLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRR--IQ 603
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
A WN MI G+ G + A+ +F+ MQ+ V P++ +F A+LSAC ++G + + +
Sbjct: 604 NKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWK 663
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
F M D+ + P+ EH+ CMVDLLGR+G LDEA +LI +P +P +++ +LLG+C H
Sbjct: 664 YFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIH 723
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
N E A L ++EP N ++++ N+Y+ RWED+ +R+++
Sbjct: 724 KNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELM 770
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 8/322 (2%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
+ T + V+ AC + L +Q+HG + SD + L+ MY K G L A VF
Sbjct: 234 TATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFD 293
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ +RN +WN+MI+ G A LF L KPD TWN ++SG G +
Sbjct: 294 SME-NRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKE 352
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
E + ++MQ G P+ +TSVL A ++L L +GKETHG+V+R + D + T+LI
Sbjct: 353 EVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLI 412
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY+K + A+ FD +K + WN+++SGY G +E A+ + + M++E +KP+
Sbjct: 413 DMYVKNHSLTSAQAVFDN--MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPD 470
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
++ ++S G +AL + GL P + ++ ++G ++ +
Sbjct: 471 LVTWNGMISGYAMWGCGKEALAVLH-QTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFF 529
Query: 311 RELPE----PTVSVYHSLLGAC 328
++ + P + LL AC
Sbjct: 530 AQMQQEGVMPNSASITCLLRAC 551
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 39/299 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S + + C ++ + G ++HG +K D + AL++ Y +C L A+ VF
Sbjct: 132 DSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVF 191
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +L WN I +LN +SEK + E
Sbjct: 192 HEMPNPEALL-WNEAI---ILNLQSEKLQKGVE--------------------------- 220
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
LF KMQ + + + VL AC + AL K+ HG+V R L+ D S+ L
Sbjct: 221 -----LFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPL 275
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
ISMY K G+ ARR FD E + + + WN+MIS Y G A +F ++ +KP
Sbjct: 276 ISMYSKNGKLELARRVFDSMENR--NTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP 333
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ ++ +LS G+ ++ L I M + G KP ++ + G L+ +E
Sbjct: 334 DIVTWNCLLSGHFLHGYKEEVLNILQRMQGE-GFKPNSSSMTSVLQAISELGFLNMGKE 391
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 11/266 (4%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGF-SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
AM + GL K WNS + F S G ++F+++ G+V + + L
Sbjct: 86 AMVFYVGLPRNYLK-----WNSFVEEFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVAL 140
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
C + + LG E HG +I+ + D + AL++ Y +C A + F E+ +
Sbjct: 141 KTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFH--EMPNPE 198
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN I ++ + + VE+F MQ +K +A+ V VL ACG G ++ A QI
Sbjct: 199 ALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHG 258
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--ACWCHLN 333
+ FGL ++ + ++G+L+ AR + + S ++S++ A LN
Sbjct: 259 YV-FRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLN 317
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILS 359
++ +M+P+ T +LS
Sbjct: 318 DAWSLFYELESSDMKPDIVTWNCLLS 343
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 216/385 (56%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT I V+S+CA L L GR+ H + + + AL+DMY+KCG L A
Sbjct: 205 KPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARK 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ +++W TM+ G +G + A +LF+ + + P WN+MI G+
Sbjct: 265 LFDSMT-NKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVP----WNAMIGGYVHAN 319
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ+ + P + S LSAC+ L AL +G H ++ + +L+ + ++ T
Sbjct: 320 RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 379
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ + A + F E+ + W A+ISG +G A+ F M V
Sbjct: 380 ALIDMYAKCGKITKAIQVFQ--ELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 437
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +F+ +LSAC H G V++ + F+ M F L PK +H+ CMVDLLGR+G L+EA
Sbjct: 438 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 497
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ +P E V+ +L AC H N +GE A KL +M+P + +V+L+N+Y
Sbjct: 498 ELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAE 557
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W++ G+ R+++ R + K PG S+
Sbjct: 558 MWKEAGKARKLMRQRGVEKTPGCSS 582
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 156/361 (43%), Gaps = 66/361 (18%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+C +P++ T+ + ACA L ++ G ++ G L + SD + A++ + + CG L
Sbjct: 99 QCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDL 158
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F + R++++WN+MI G + G + +A+ + + EG KPD T
Sbjct: 159 DGARKMFDK-SCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVT------- 210
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ V+S+CA L L LG+E+H ++ L
Sbjct: 211 ----------------------------MIGVVSSCAQLEDLDLGRESHCYIEENGLKLT 242
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD 214
+A AL+ MYMKCG AR+ FD F+ PD
Sbjct: 243 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPD 302
Query: 215 -DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WNAMI GY + A+ +F+ MQ + P+ + V+ LSAC G +D + I
Sbjct: 303 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
++ L ++D+ + G++ +A ++ +ELP + +++ H N
Sbjct: 363 HHYIEKH-ELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGN 421
Query: 334 S 334
+
Sbjct: 422 A 422
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 143/290 (49%), Gaps = 16/290 (5%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+ +WN I GF EA L+++ +Q G P + ACA LS +++G
Sbjct: 68 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 127
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E GHV+ + D ++ A+I + + CG AR+ FD+ ++ D WN+MI+GY R
Sbjct: 128 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR--DLVSWNSMINGYVR 185
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G A+ + M+ E +KP+ + + V+S+C +D + ++++ GLK
Sbjct: 186 RGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVP 244
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEM 347
++D+ + G L+ AR+L + T+ + +++ + S L +MA KL EM
Sbjct: 245 LANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVG---YAQSGL-LDMAWKLFDEM 300
Query: 348 EPENPTPF--VILSNIYAGLGRWEDVGRIRQM----INDRQLTKLPGISA 391
++ P+ +I ++A G+ E + +M IN ++T + +SA
Sbjct: 301 PDKDVVPWNAMIGGYVHANRGK-EALALFNEMQAMNINPDEVTMVSCLSA 349
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ ++ P+ VT +S +SAC+ L L G +H K E + +GTAL+DMY KCG +
Sbjct: 332 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 391
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VFQEL G RN LTW +I+G+ L+G + A+ F + PD T+ ++S
Sbjct: 392 TKAIQVFQELPG-RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSA 450
Query: 123 FSQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLN 180
G+ E K F +M S + P LK + ++ L+ +E I AD
Sbjct: 451 CCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEAD-- 508
Query: 181 KDESMATALISMYMKC---GQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAV 236
A +++ C G R + ++ P D + + + YG ++ A
Sbjct: 509 -----AVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAG 563
Query: 237 EIFDLMQQEKVK 248
+ LM+Q V+
Sbjct: 564 KARKLMRQRGVE 575
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 229/394 (58%), Gaps = 16/394 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
++ C++ PN+ TF S+I AC + +Q+H LK DT L+ +Y G
Sbjct: 95 LQHCVT--PNAFTFPSLIRACK---LEEEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFG 149
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF + N+++W ++++G G ++A +FE + K + +WN+MI
Sbjct: 150 SLDDARRVFCTMSDP-NVVSWTSLVSGYSQWGLVDEAFRVFELMP---CKKNSVSWNAMI 205
Query: 121 SGFSQLGMRF-EAFKLFEKMQSTGMVPSLKCVT-SVLSACADLSALKLGKETHGHVIRAD 178
+ F + G RF EAF LF +M+ + + V ++LSAC + AL+ G H +V +
Sbjct: 206 ACFVK-GNRFREAFALFRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTG 264
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ D +AT +I MY KCG A F ++K + WN MI G+ +G+ E A+ +
Sbjct: 265 IVLDSKLATTIIDMYCKCGCLDKAFHVFCGLKVK--RVSSWNCMIGGFAMHGKGEDAIRL 322
Query: 239 FDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F M++E V P+S +FV VL+AC H+G V++ F M D G+ P +EH+GCMVDLL
Sbjct: 323 FKEMEEEAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLL 382
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
R+GRL+EA+++I E+P P +V +LLGAC H N +LGEE+ ++ E++PEN +V
Sbjct: 383 ARAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYV 442
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IL N+YA G+WE V +R++++DR + K PG S
Sbjct: 443 ILGNMYASCGKWEQVAGVRKLMDDRGVKKEPGFS 476
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 213/384 (55%), Gaps = 6/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + SV+ A L G Q+H +K D + +AL+DMY KC C
Sbjct: 207 KPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSG 266
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ ++ N ++ G+ NG + A+E+F+ +G + +W SMI+ SQ G
Sbjct: 267 VFNEMD-EVDVGACNALVTGLSRNGLVDNALEVFKQF--KGMDLNVVSWTSMIASCSQNG 323
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +MQ G+ P+ + +L AC +++AL GK H +R + D + +
Sbjct: 324 KDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGS 383
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ +R FD + + WN++++GY +G+ A+ IF+LMQ+
Sbjct: 384 ALIDMYAKCGRMLASRLCFDMMPNR--NLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQ 441
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ SF VLSAC G ++ F M + G++ + EH+ CMV LLGRSGRL+EA
Sbjct: 442 KPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAY 501
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I+++P EP V+ +LL +C H DLGE A ++ E+EP NP +++LSNIYA
Sbjct: 502 AMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKA 561
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V +R M+ R L K PG S
Sbjct: 562 MWVEVDMVRDMMRSRGLKKNPGYS 585
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 167/357 (46%), Gaps = 39/357 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +VI CA+L LQ G+Q+H L D+++ ++L+ MY++ L A NV
Sbjct: 72 PDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNV 131
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +L ++T + +I+ GR ++ ELF G + + +WN MISGF++ G
Sbjct: 132 FDKLP-QPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGS 190
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F+ M G+ P V+SVL A DL +G + H +VI+ L D+ + +A
Sbjct: 191 YLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSA 250
Query: 189 LISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPA 217
LI MY KC G A F QF+ +
Sbjct: 251 LIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVV 310
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV--DKALQIFT 275
W +MI+ +NG+ A+E+F MQ E VKPNS + +L ACG+ + KA F+
Sbjct: 311 SWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFS 370
Query: 276 MMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ + F + G ++D+ + GR+ +R +P + ++SL+ H
Sbjct: 371 LRNGIF----NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMH 423
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
I FS+L ++F M + G+VP + + +V+ CA LSAL+ GK+ H + + L
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQF-------------------EIKPDDPAF-- 218
D + ++L+ MY++ AR FD+ +K F
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 219 ------------WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
WN MISG+ R+G Y AV +F M E +KP+ S +VL A G
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+QI + GL P + ++D+ G+ E + E+ E V ++L+
Sbjct: 226 PLMGIQIHCYVIKQ-GLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALV 283
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 219/381 (57%), Gaps = 14/381 (3%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
SV+ AC LL GRQVHG LK D +G ++V MY+ G + A VF + +
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMP-N 172
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R++++WN+MIAG + G E A ++FE ++ + D TW SMIS + Q +A L
Sbjct: 173 RDVVSWNSMIAGYLKAGEIELAKKVFETMSDK----DVVTWTSMISAYVQNRCPMKALDL 228
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE----SMATALIS 191
F +M S G+ P + SVLSA ADL ++ GK H +V +NK E + +ALI
Sbjct: 229 FREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYV---SMNKIELSSGFIGSALID 285
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG A F + + WN+MISG +G A++IF M++ ++PN
Sbjct: 286 MYSKCGYIENAYHVFRSISHRRN-IGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNE 344
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ +LS C H G V++ F M + + + P+ +H+GCM+DL GR+GRL++A +I+
Sbjct: 345 ITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQ 404
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+P E + + ++L A H + ++G+ A++ E+ P++ + +V+LSNIYA GRW+D
Sbjct: 405 NMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDD 464
Query: 371 VGRIRQMINDRQLTKLPGISA 391
V +IR M+ R + K+ G S+
Sbjct: 465 VAKIRLMMRQRGVKKIAGCSS 485
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 22/267 (8%)
Query: 79 LTWNTMIAGMMLNGRS---EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
T + +IA L+G S + A +F + H P+ + ++I GFS E+ L
Sbjct: 39 FTVSRLIAFCSLSGVSGGLDYASSVFSRIQH----PNSFIFFALIKGFSDTSNPVESLIL 94
Query: 136 FEKM-----QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ +M S+G+ S + SVL AC L A G++ HG V++ L D + +++
Sbjct: 95 YARMLSCLNYSSGVEFS---IPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMV 151
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY+ G+ ARR FD+ + D WN+MI+GY + GE E A ++F+ M + V
Sbjct: 152 RMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELAKKVFETMSDKDV--- 206
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
++ +++SA KAL +F M GL+P ++ + G ++E + L
Sbjct: 207 -VTWTSMISAYVQNRCPMKALDLFREM-LSLGLRPDGPAIVSVLSAIADLGFVEEGKWLH 264
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLG 337
+ + + +G+ + S G
Sbjct: 265 AYVSMNKIELSSGFIGSALIDMYSKCG 291
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 219/381 (57%), Gaps = 28/381 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T SV+S C+++ G QVH L+ K+ +S+ I +LV +YLKCGC+ A N
Sbjct: 179 EPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKN 238
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ +N++TWN MIAG +AM+L A + F Q G
Sbjct: 239 LFNRME-YKNLITWNAMIAG------HAQAMDL----AKDNFSAQ------------QTG 275
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++ K+ +G P L ++S+L+ C+ L+AL+ G++ H I++ D + T
Sbjct: 276 T--EALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGT 333
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ F ++ W +MI+ + R+G+ + A+++F+ M+
Sbjct: 334 ALVDMYDKCGSIERARKAF--LDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGF 391
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV VL+AC HAG VD+AL+ F +M ++ +KP +H+GC+VD+ R GRLDEA
Sbjct: 392 RPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAF 451
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++I+ + EP ++ L+ C H N +LG A +L +++P + +V+L N+Y
Sbjct: 452 DVIKRMDVEPNEFIWLLLIAGCRNHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAE 511
Query: 367 RWEDVGRIRQMINDRQLTKLP 387
RWEDV +R+++ + ++ KL
Sbjct: 512 RWEDVSMVRRLMKEEKVGKLK 532
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 153/361 (42%), Gaps = 53/361 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T ++AC+SL + G+Q H +K D+ IG AL +Y K G L +
Sbjct: 79 PSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKA 138
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E G +++++W T+I+ NGR+ + LF + E +P+ T
Sbjct: 139 FRE-TGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFT------------- 184
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+TSVLS C+ + + LG + H + + + +
Sbjct: 185 ----------------------LTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNS 222
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-----------ESAVE 237
L+ +Y+KCG A+ F++ E K + WNAMI+G+ + + A+
Sbjct: 223 LVYLYLKCGCIDEAKNLFNRMEYK--NLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALG 280
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
++ + + KP+ + ++L+ C +++ QI G +VD+
Sbjct: 281 MYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQTIKS-GFLSDVVVGTALVDMY 339
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPF 355
+ G ++ AR+ ++ T+ + S++ + H S ++ M+L P N F
Sbjct: 340 DKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRP-NQITF 398
Query: 356 V 356
V
Sbjct: 399 V 399
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 33 VHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNG 92
VH +K + + + LV++Y KCG + A VF L RN++
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLP-RRNVVV------------ 48
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
W ++++G+ Q A ++F M +G PS ++
Sbjct: 49 -----------------------WTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLS 85
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
L+AC+ L ++ LGK+ H +I+ ++ D S+ AL S+Y K G + + F E
Sbjct: 86 IALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR--ETG 143
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D W +IS G NG + +F M E V+PN + +VLS C D +Q
Sbjct: 144 EKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDLGMQ 203
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ + + G + +V L + G +DEA+ L + + +++++
Sbjct: 204 VHS-LSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIA 256
>gi|6691205|gb|AAF24543.1|AC007508_6 F1K23.11 [Arabidopsis thaliana]
Length = 841
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 217/363 (59%), Gaps = 10/363 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH +K + + D ++ TALVD Y+K G L A VF+ +K N++ +MI+G M
Sbjct: 481 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMK-DENVVCCTSMISGYMN 539
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLK 149
G E A E+F + D +N+M+ GFS+ G + + ++ MQ G P++
Sbjct: 540 QGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNIS 595
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ AC+ L++ ++G++ H ++++ + M ++L+ MY KCG + ARR FDQ
Sbjct: 596 TFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQM 655
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K + W +MI GYG+NG E A+E+F M++ +++PN +F+ LSAC H+G VDK
Sbjct: 656 QEK--NVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDK 713
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGAC 328
+IF M D+ +KPK EH+ C+VDL+GR+G L++A E R +PE P ++ +LL +C
Sbjct: 714 GYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 773
Query: 329 WCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
H N +L A +L ++ + P ++ LSN+YA +W++V +IR+++ R+++K
Sbjct: 774 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 833
Query: 388 GIS 390
G S
Sbjct: 834 GRS 836
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K Q D I L+ ++LKCGCL A VF EL + +N MI+G +
Sbjct: 374 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKP-TLSAYNYMISGYL 432
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G ++ + L + +++ G K D T + ++ + G ST ++P
Sbjct: 433 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG-------------STMILPRSL 479
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C + H +I+ D+ D+ + TAL+ Y+K G+ AR F+
Sbjct: 480 C-----------------RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETM 522
Query: 210 E-----------------------------IKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ K D +NAM+ G+ R+GE + +V+++
Sbjct: 523 KDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMY 582
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ+ PN ++F +V+ AC + Q+ + G+ + ++D+ +
Sbjct: 583 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAK 641
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
G +++AR + ++ E V + S++ + N + E+ +++E E
Sbjct: 642 CGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 692
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 15/247 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF SVI AC+ L + G+QVH +K + +G++L+DMY KCG + A
Sbjct: 591 HPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARR 650
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +++ +N+ +W +MI G NG E+A+ELF + +P+ T+ +S S G
Sbjct: 651 VFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSG 709
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ + +++FE MQ M P ++ C+ ++ DL+ A + + D
Sbjct: 710 LVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER-------PD 762
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDD-PAFWNAMISGYGRNGEYESAVEIFD 240
+ AL+S G A + F++ D P + A+ + Y N ++++ +I +
Sbjct: 763 SDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIRE 822
Query: 241 LMQQEKV 247
+M++ ++
Sbjct: 823 VMKRRRI 829
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ F Q+ + K + L + A K GK+ H +I+ D +++ L+ +
Sbjct: 340 YSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLIL 399
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG S+AR+ FD+ KP A+ N MISGY ++G + + + M K +
Sbjct: 400 HLKCGCLSYARQVFDELP-KPTLSAY-NYMISGYLKHGLVKELLLLVQRMSYSGEKADGY 457
Query: 253 SFVAVLSACGHAGHV------------DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ VL A G + ++ +DD +VD +S
Sbjct: 458 TLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL--------ITALVDTYVKS 509
Query: 301 GRLDEARELIRELPEPTV 318
G+L+ AR + + + V
Sbjct: 510 GKLESARTVFETMKDENV 527
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 203/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T +S+I C LQ G+Q+H L+ + TALVDMY KC + A +
Sbjct: 296 PNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARAL 355
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + D W +M+S ++Q
Sbjct: 356 FDSTQNR------------------------------------DVMIWTAMLSAYAQANC 379
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+AF LF++M+++G+ P+ + S+LS CA AL LGK H ++ + + D + TA
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA 439
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG + A R F E D WNA+I+G+ +G E A++IF M+++ VK
Sbjct: 440 LVDMYAKCGDINAAGRLF--IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVK 497
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ +L AC HAG V + ++F M FGL P+ EH+GCMVDLLGR+G LDEA E
Sbjct: 498 PNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHE 557
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P +P V+ +L+ AC H N LGE A +L E+EPEN V++SNIYA R
Sbjct: 558 MIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANR 617
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D +R+ + + K PG S
Sbjct: 618 WSDAAGVRKTMKTVGMKKEPGHS 640
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 140/316 (44%), Gaps = 45/316 (14%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
SV+ AC + + Q G+++HG LK D +G AL+ MY +C C+ A VF ++
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMM-E 157
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
R++++W+TMI + N + A+EL + +P SM++ F
Sbjct: 158 RDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLF------------ 205
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM--ATALISMY 193
AD + +++GK H +VIR N+ + TAL+ MY
Sbjct: 206 -----------------------ADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMY 242
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR+ F+ K W AMI+G R+ E ++F MQ+E + PN +
Sbjct: 243 AKCGHLGLARQLFNGLTQKT--VVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEIT 300
Query: 254 FVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
++++ CG G + K L + + + G +VD+ G+ + AR L
Sbjct: 301 MLSLIVECGFTGALQLGKQLHAYILRN---GFSVSLALATALVDMYGKCSDIRNARALFD 357
Query: 312 ELPEPTVSVYHSLLGA 327
V ++ ++L A
Sbjct: 358 STQNRDVMIWTAMLSA 373
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI--GTALVDMYLKCGCLPCA 65
P+ V +S+++ A ++ G+ +H ++ + TAL+DMY KCG L A
Sbjct: 192 RPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLA 251
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F NG ++K + +W +MI+G +
Sbjct: 252 RQLF---------------------NGLTQKTV---------------VSWTAMIAGCIR 275
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E KLF +MQ + P+ + S++ C AL+LGK+ H +++R + ++
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ATAL+ MY KC AR FD + + D W AM+S Y + + A +FD M+
Sbjct: 336 ATALVDMYGKCSDIRNARALFDSTQNR--DVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-----MVDLLGRS 300
V+P + V++LS C AG +D + + +D + + C +VD+ +
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE------RVEVDCILNTALVDMYAKC 447
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G ++ A L E + ++++++ H GEE EME + P
Sbjct: 448 GDINAAGRLFIEAISRDICMWNAIITGFAMH---GYGEEALDIFAEMERQGVKP 498
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 151/363 (41%), Gaps = 39/363 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P VT +S++S CA L G+ VH K + D ++ TALVDMY KCG + A
Sbjct: 396 RPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGR 455
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E SR+I WN +I G ++G E+A+++F + +G KP+ T+ ++ S G
Sbjct: 456 LFIEAI-SRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E KLFEKM T G+VP ++ C+ +L L E H + + +
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLD------EAHEMIKSMPIKPNT 568
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ P Q EI+P++ + M + Y + A + M
Sbjct: 569 IVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTM 628
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSG 301
+ +K V ++ H F M D ++ E M L +G
Sbjct: 629 KTVGMKKEPGHSVIEVNGTVHE---------FLMGDQSHPQIRRINEMLAEMRRKLNEAG 679
Query: 302 RLDEARELIRELPE---PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+ + ++ + E T YHS E++AM + TP I+
Sbjct: 680 YVPDTSTVLLNIDEEEKETALTYHS--------------EKLAMAFGLISTAPSTPIRIV 725
Query: 359 SNI 361
N+
Sbjct: 726 KNL 728
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 20/218 (9%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
SVL AC +S +LGKE HG V++ L++D + AL+ MY +C +AR FD+ +
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDK--MM 156
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH--VDKA 270
D W+ MI RN E++ A+E+ M +V+P+ + V++++ + + KA
Sbjct: 157 ERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKA 216
Query: 271 LQIFTMMDDDFGLKPKQEHFG-----CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + + + + EH G ++D+ + G L AR+L L + TV + +++
Sbjct: 217 MHAYVIRNSN------NEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMI 270
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNI 361
C + S+ EE M+ EN P +LS I
Sbjct: 271 AGC---IRSNRLEEGTKLFIRMQEENIFPNEITMLSLI 305
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 210/386 (54%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ +S++ AC L L+ GR V G ++ ++ IG+AL+ MY KCG
Sbjct: 221 EPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCG------- 273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
EL+ +R I F+G+A D TWN++ISG++Q G
Sbjct: 274 ---ELESARRI----------------------FDGMAAR----DVITWNAVISGYAQNG 304
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF M+ + + +T+VLSACA + AL LGK+ + + D +AT
Sbjct: 305 MADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVAT 364
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK- 246
ALI MY K G A+R F K + A WNAMIS +G+ + A+ +F M E
Sbjct: 365 ALIDMYAKSGSLDNAQRVFKDMPQK--NEASWNAMISALAAHGKAKEALSLFQHMSDEGG 422
Query: 247 -VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +FV +LSAC HAG VD+ ++F MM FGL PK EH+ CMVDLL R+G L E
Sbjct: 423 GARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYE 482
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A +LIR++PE P +LLGAC N D+GE + + E++P N ++I S IYA
Sbjct: 483 AWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYAN 542
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L WED R+R ++ + +TK PG S
Sbjct: 543 LNMWEDSARMRLLMRQKGITKTPGCS 568
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 161/332 (48%), Gaps = 48/332 (14%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS P++ TF +CA+L L H L K+ SD +L+ Y +CG +
Sbjct: 116 LSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVAS 175
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATWNSMISGF 123
A VF E+ R+ ++WN+MIAG G + +A+E+F + +GF+PD +
Sbjct: 176 ARKVFDEIP-HRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMS-------- 226
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ S+L AC +L L+LG+ G V+ + +
Sbjct: 227 ---------------------------LVSLLGACGELGDLELGRWVEGFVVERGMTLNS 259
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +ALISMY KCG+ ARR FD + D WNA+ISGY +NG + A+ +F M+
Sbjct: 260 YIGSALISMYAKCGELESARRIFDGMAAR--DVITWNAVISGYAQNGMADEAILLFHGMK 317
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLLGR 299
++ V N + AVLSAC G +D QI D++ + +H ++D+ +
Sbjct: 318 EDCVTANKITLTAVLSACATIGALDLGKQI-----DEYASQRGFQHDIFVATALIDMYAK 372
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
SG LD A+ + +++P+ + +++++ A H
Sbjct: 373 SGSLDNAQRVFKDMPQKNEASWNAMISALAAH 404
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 9/226 (3%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+H P+ +N MI + + A LF +M S + P +CA+L+
Sbjct: 77 FSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLA 136
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+L H + + L+ D A +LI+ Y +CG + AR+ FD EI D WN+M
Sbjct: 137 SLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFD--EIPHRDSVSWNSM 194
Query: 223 ISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDD 279
I+GY + G AVE+F M +++ +P+ S V++L ACG G ++ + ++ F +
Sbjct: 195 IAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVV--- 251
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ G+ ++ + + G L+ AR + + V +++++
Sbjct: 252 ERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVI 297
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/376 (35%), Positives = 213/376 (56%), Gaps = 7/376 (1%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
S +SAC+ +L ++ GR VHGL +K+ + + AL+ +Y CG + A +F +
Sbjct: 275 SALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGEL 334
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++++WN+MI+G + G + A LF + + D +W++MISG++Q EA L
Sbjct: 335 LDLISWNSMISGYLRCGSIQDAEMLFYSMP----EKDVVSWSAMISGYAQHECFSEALAL 390
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F++MQ G+ P + S +SAC L+ L LGK H ++ R L + ++T LI MYMK
Sbjct: 391 FQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMK 450
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A F + ++ + WNA+I G NG E ++ +F M++ PN +F+
Sbjct: 451 CGCVENALEVF--YAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFM 508
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
VL AC H G V+ F M + ++ +H+GCMVDLLGR+G L EA ELI +P
Sbjct: 509 GVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPM 568
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
P V+ + +LLGAC H ++++GE + KL +++P++ V+LSNIYA G W +V I
Sbjct: 569 APDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEI 628
Query: 375 RQMINDRQLTKLPGIS 390
R ++ + K PG S
Sbjct: 629 RGIMAQHGVVKTPGCS 644
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 169/377 (44%), Gaps = 61/377 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T+ ++ CA+ + GRQ+H + D + L+++Y CG + A
Sbjct: 102 KPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARR 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-------------------- 107
VF+E ++++WNT++AG + G E+A +FEG+
Sbjct: 162 VFEE-SPVLDLVSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEK 220
Query: 108 ---------GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
G + D +W++M+S + Q M EA LF +M+ +G+ V S LSAC
Sbjct: 221 ARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSAC 280
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ---------- 208
+ + +++G+ HG ++ + S+ ALI +Y CG+ ARR FD
Sbjct: 281 SRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISW 340
Query: 209 --------------------FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+ + D W+AMISGY ++ + A+ +F MQ V+
Sbjct: 341 NSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVR 400
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + V+ +SAC H +D I + + L+ ++D+ + G ++ A E
Sbjct: 401 PDETALVSAISACTHLATLDLGKWIHAYISRN-KLQVNVILSTTLIDMYMKCGCVENALE 459
Query: 309 LIRELPEPTVSVYHSLL 325
+ + E VS +++++
Sbjct: 460 VFYAMEEKGVSTWNAVI 476
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +S ISAC L L G+ +H + + Q + ++ T L+DMY+KCGC+ A
Sbjct: 400 RPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALE 459
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ + + TWN +I G+ +NG E+++ +F + G P+ T+ ++ +G
Sbjct: 460 VFYAME-EKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMG 518
Query: 128 MRFEAFKLFEKM----QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + F M + + C+ +L L KE + + D
Sbjct: 519 LVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLL------KEAEELIDSMPMAPDV 572
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ K R + +++PD F + + Y G + + +EI +M
Sbjct: 573 ATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIM 632
Query: 243 QQEKV 247
Q V
Sbjct: 633 AQHGV 637
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 210/387 (54%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++V+SACA +Q GRQVH S+ I AL+D+Y KCG
Sbjct: 232 KPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCG------- 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LF+GL+++ D +WN+MI G++ L
Sbjct: 285 -------------------------EVETACGLFQGLSNK----DVISWNTMIGGYTHLN 315
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + S+L ACA L A+ G+ H ++ + + S+
Sbjct: 316 LYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSL 375
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A + F+ + NAMI G+ +G +A +IF M++
Sbjct: 376 RTSLIDMYAKCGDIEAAHQVFNSMHHRTLSAC--NAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ +FV +LSAC H+G +D +IF M ++ + PK EH+GCM+DLLG G E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKE 493
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I + EP ++ SLL AC H N +LGE A KL ++EPENP +V+LSNIYA
Sbjct: 494 AEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYAT 553
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V IR ++ND+ + K+PG S+
Sbjct: 554 AGRWNEVANIRALLNDKGMKKVPGCSS 580
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 192/382 (50%), Gaps = 16/382 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA L + G+Q+HG LK+ + D + T+L+ MY+K G AH V
Sbjct: 101 PNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++ +I G G E A ++F+ + D +WN++ISG++ G
Sbjct: 161 F-DGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP----VKDVVSWNAIISGYADTGN 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF++M T + P + +V+SACA +++LG++ H + L + + A
Sbjct: 216 NKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNA 275
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F K D WN MI GY Y+ A+ +F M +
Sbjct: 276 LIDLYSKCGEVETACGLFQGLSNK--DVISWNTMIGGYTHLNLYKEALLLFQEMLRSGEN 333
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC G +D I +D G+ ++D+ + G ++ A
Sbjct: 334 PNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAH 393
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + T+S ++++ H ++ ++ ++++ +EP++ T +LS ++G
Sbjct: 394 QVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453
Query: 365 LGRWEDVGR--IRQMINDRQLT 384
+ D+GR R M + ++T
Sbjct: 454 M---LDLGRRIFRSMTQNYKIT 472
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 158/363 (43%), Gaps = 81/363 (22%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N+L WNTM G L+ DP +
Sbjct: 53 LPYAISVFETIQ-EPNLLIWNTMFRGHALSS-------------------DPVS------ 86
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA L K G++ HGHV++
Sbjct: 87 ----------AIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYEL 136
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY+K G+ A + FD EI
Sbjct: 137 DLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIP 196
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNA+ISGY G + A+++F M + VKP+ ++ V V+SAC +G + Q
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ 256
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD GL + ++DL + G ++ A L + L V +++++G + HL
Sbjct: 257 VHSWIDDH-GLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGG-YTHL 314
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNIYA-------GLGRWEDV---GRIRQMIND 380
N L +E + QEM ENP +LS + A GRW V RI+ + N
Sbjct: 315 N--LYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNA 372
Query: 381 RQL 383
L
Sbjct: 373 SSL 375
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 8/246 (3%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + FGR +H K K + + + T+L+DMY KCG +
Sbjct: 332 ENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEA 391
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + R + N MI G ++GR+ A ++F + G +PD T+ ++S S
Sbjct: 392 AHQVFNSMH-HRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 450
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
GM ++F M Q+ + P L+ ++ L L L KE + + D
Sbjct: 451 HSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDL---LGHLGLFKEAEEMINTMTMEPDG 507
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +L+ G F + +I+P++P + + + Y G + I L+
Sbjct: 508 VIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEVANIRALL 567
Query: 243 QQEKVK 248
+ +K
Sbjct: 568 NDKGMK 573
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 221/390 (56%), Gaps = 12/390 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLT--LKIEKQSDTMIGTALVDMYLKCGCLPCA 65
EP+ T + ++ +C L ++FG+ VHG K S+ ++G AL+DMY+KC + A
Sbjct: 161 EPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELA 220
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F LK ++I++WN ++AG G E+A F + D +WNS+++G++
Sbjct: 221 LRTFGALK-EKDIVSWNMIVAGCAKVGELEQARLFFYQMPCR----DIVSWNSLVTGYAC 275
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +L M ++P + S++SA + AL G+ HG VIR + D +
Sbjct: 276 RGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFL 335
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ALI MY KCG A R F EI D W MI+G +G A+E+F M QE
Sbjct: 336 GSALIDMYCKCGSIERASRVFK--EINKKDVTVWTTMITGLAFHGYGSKALELFSEM-QE 392
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ +FV+VLSAC H+G VD+ +++F+ M D+G++P EH+GC+VDLL RSGRL E
Sbjct: 393 DVSPDDVTFVSVLSACSHSGLVDQGIKVFSSM-TDYGIEPGVEHYGCLVDLLARSGRLSE 451
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+++I ++P +P+ S++ ++L AC + +L E + +L ++PE + +LSNIYA
Sbjct: 452 AKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAA 511
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
GRW +IR+ + R + K G S+ +
Sbjct: 512 SGRWSYSKKIRETMESRGVKKTAGCSSVVV 541
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 165/387 (42%), Gaps = 80/387 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T + ++ A ++ +Q+H + S + L+ +YL+ G + AH V
Sbjct: 64 PDKQTLLYLLQAVN---FISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQV 120
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ S +I+++N MI G G +AM LF + G +PD F+ LG+
Sbjct: 121 FEKMP-SPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDE---------FTILGL 170
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESMA 186
L +C L +K GK HG + R ++ + +
Sbjct: 171 --------------------------LVSCGQLGNVKFGKAVHGWMERRKPTISSNLILG 204
Query: 187 TALISMYMKC-------------------------------GQPSWARRFFDQFEIKPDD 215
AL+ MY+KC G+ AR FF Q + D
Sbjct: 205 NALLDMYVKCQKVELALRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCR--D 262
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN++++GY G++ S E+ M EKV P++ + ++++SA +G +D+
Sbjct: 263 IVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHG 322
Query: 276 MMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+ ++ K + F ++D+ + G ++ A + +E+ + V+V+ +++ H
Sbjct: 323 WV---IRMQIKLDAFLGSALIDMYCKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGY 379
Query: 334 SDLGEEMAMKLQE-MEPENPTPFVILS 359
E+ ++QE + P++ T +LS
Sbjct: 380 GSKALELFSEMQEDVSPDDVTFVSVLS 406
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 8/161 (4%)
Query: 109 FKPDPA--TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
F P+P +N++IS FS L + E+F L+ + S+G P + + +L A +S +
Sbjct: 26 FTPNPNLFIYNTLISAFSSLK-KIESFYLYNVLLSSGECPDKQTLLYLLQAVNFISQV-- 82
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
K+ H I L + LI +Y++ G A + F++ PD +F N MI GY
Sbjct: 83 -KQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMP-SPDIVSF-NVMIVGY 139
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
+ G A+ +F M ++P+ + + +L +CG G+V
Sbjct: 140 AKKGFGLEAMRLFHEMVGLGLEPDEFTILGLLVSCGQLGNV 180
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 210/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T+ S++ C + L L+ G++VH ++ + + AL+ MY KCG L
Sbjct: 296 PNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGL------ 349
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
++A +LF L H D TW +M++G++QLG
Sbjct: 350 --------------------------KEARKLFGDLPHR----DVVTWTAMVTGYAQLGF 379
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ G+ P TS L++C+ + L+ GK H ++ A + D + +A
Sbjct: 380 HDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSA 439
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+SMY KCG AR F+Q + + W AMI+G ++G A+E F+ M+++ +K
Sbjct: 440 LVSMYAKCGSMDDARLVFNQMSER--NVVAWTAMITGCAQHGRCREALEYFEQMKKQGIK 497
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F +VLSAC H G V++ + F M D+G+KP EH+ C VDLLGR+G L+EA
Sbjct: 498 PDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAEN 557
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P +P SV+ +LL AC H + + GE A + +++P++ +V LSNIYA GR
Sbjct: 558 VILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGR 617
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ED ++RQ++ R + K PG S
Sbjct: 618 YEDAEKVRQVMEKRDVVKEPGQS 640
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 171/355 (48%), Gaps = 43/355 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VTF+S+++A + LQ G++VH K + + +GT+LV MY KCG + A
Sbjct: 194 KPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQV 253
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L +N++TW +IAG G+ + A+EL E + P+ T+
Sbjct: 254 IFDKLP-EKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITY----------- 301
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
TS+L C AL+ GK+ H ++I++ ++ +
Sbjct: 302 ------------------------TSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY KCG AR+ F ++ D W AM++GY + G ++ A+++F MQQ+ +
Sbjct: 338 ALITMYCKCGGLKEARKLFG--DLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGI 395
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP+ +F + L++C + + I ++ + L + +V + + G +D+A
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQ--SALVSMYAKCGSMDDA 453
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
R + ++ E V + +++ C H E MK Q ++P+ T +LS
Sbjct: 454 RLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 147/315 (46%), Gaps = 39/315 (12%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
S F ++ CA L L+ GR+VH LK Q + + L+ MY KCG L A VF
Sbjct: 96 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 155
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ RNI++W MI + ++ +A + +E + G KPD T+ S+++ F+
Sbjct: 156 GIR-DRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTN----- 209
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
P L L++G++ H + +A L + + T+L+
Sbjct: 210 ---------------PEL---------------LQVGQKVHMEIAKAGLELEPRVGTSLV 239
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY KCG S A+ FD+ K + W +I+GY + G+ + A+E+ + MQQ +V PN
Sbjct: 240 GMYAKCGDISKAQVIFDKLPEK--NVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPN 297
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
++ ++L C ++ ++ + G + ++ + + G L EAR+L
Sbjct: 298 KITYTSILQGCTTPLALEHGKKVHRYIIQS-GYGREIWVVNALITMYCKCGGLKEARKLF 356
Query: 311 RELPEPTVSVYHSLL 325
+LP V + +++
Sbjct: 357 GDLPHRDVVTWTAMV 371
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 14/267 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +TF S +++C+S +LQ G+ +H + D + +ALV MY KCG + A
Sbjct: 396 KPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARL 455
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RN++ W MI G +GR +A+E FE + +G KPD T+ S++S + +G
Sbjct: 456 VFNQM-SERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVG 514
Query: 128 MRFEAFKLFEKMQ----STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E K F M MV C +L L +E ++
Sbjct: 515 LVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL------EEAENVILTMPFQPGP 568
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S+ AL+S R + ++ PDD + A+ + Y G YE A ++ +M
Sbjct: 569 SVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVM 628
Query: 243 QQ-EKVKPNSASFVAVLSACGHAGHVD 268
++ + VK S++ V H HV+
Sbjct: 629 EKRDVVKEPGQSWIEVDGKV-HVFHVE 654
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 4/242 (1%)
Query: 108 GFKPDPATWNSM-ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
GF+ NS +S + G EA + M G +L CA L +L+
Sbjct: 55 GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ 114
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+E H ++++ + + + L+SMY KCG + ARR FD I+ + W AMI +
Sbjct: 115 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDG--IRDRNIVSWTAMIEAF 172
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ A + ++ M+ KP+ +FV++L+A + + + Q M GL+ +
Sbjct: 173 VAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNP-ELLQVGQKVHMEIAKAGLELE 231
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+V + + G + +A+ + +LPE V + L+ D+ E+ K+Q+
Sbjct: 232 PRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQ 291
Query: 347 ME 348
E
Sbjct: 292 AE 293
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 224/387 (57%), Gaps = 12/387 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
EPN +T I+++S CA FG +HG K+ ++ M+GTA++ MY K A
Sbjct: 61 EPNHITLIALLSGCADCE--PFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKAR 118
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ +N +TWNTMI G M +GR + A ++F+ + D +W +MI+GF +
Sbjct: 119 LVFDRVE-DKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPER----DLISWTAMINGFVKK 173
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ EA F +MQ +G+ P V + L+ACA+L AL G H V+ D + ++
Sbjct: 174 GLHEEALAWFREMQVSGVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVS 233
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+E+
Sbjct: 234 NSLIDLYCRCGCVEFARQVFDEMEKRT--VVSWNSVIVGFAANGHAHESLVYFRRMQEER 291
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP++ +F L+AC H G V++ ++ F M D+ + P+ EH+GC+VDL R+GRL+EA
Sbjct: 292 FKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEA 351
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLN-SDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+++ +P +P V SLL AC H N ++L E M +L E++ + + +VILSN+YA
Sbjct: 352 LKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKRLSELKVKGHSNYVILSNMYAA 411
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
G+WE ++R+ + L K PG S+
Sbjct: 412 DGQWEGASKMRRKMKGLGLKKQPGFSS 438
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 206/382 (53%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+++ F S ISACA + L G+Q+H + D IG ALV +Y +CG A+ F
Sbjct: 515 DNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAF 574
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ NI +WN++ISGF+Q G
Sbjct: 575 EKIDAKDNI------------------------------------SWNALISGFAQSGHC 598
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA ++F +M G+ +L S +SA A+ + +K GK+ H +I+ + + + L
Sbjct: 599 EEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVL 658
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I++Y KCG A+R F FE+ + WNAMI+GY ++G AV +F+ M+Q + P
Sbjct: 659 ITLYSKCGSIEDAKREF--FEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMP 716
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV VLSAC H G V++ L F M + GL PK EH+ C+VDLLGR+ L ARE
Sbjct: 717 NHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREF 776
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I E+P EP ++ +LL AC H N ++GE A L E+EPE+ +V+LSN+YA G+W
Sbjct: 777 IEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKW 836
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+ R RQM+ DR + K PG S
Sbjct: 837 DYRDRTRQMMKDRGVKKEPGRS 858
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 178/385 (46%), Gaps = 49/385 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ S++ C SL L G Q+H +K Q + + + L+DMY K G L A +
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
Q L+ + D +W +MI+G++Q +
Sbjct: 473 LQRLR------------------------------------EEDVVSWTAMIAGYTQHDL 496
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA KLF++M++ G+ +S +SACA + AL G++ H + ++D S+ A
Sbjct: 497 FAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNA 556
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+S+Y +CG+ A F++ + K D WNA+ISG+ ++G E A+++F M Q V+
Sbjct: 557 LVSLYARCGRAQDAYLAFEKIDAK--DNISWNALISGFAQSGHCEEALQVFSQMNQAGVE 614
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N +F + +SA + ++ + QI MM G + E ++ L + G +++A+
Sbjct: 615 ANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSETEASNVLITLYSKCGSIEDAKR 673
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PENPTPFVILSNI-Y 362
E+PE V +++++ H G E +EM+ P + T +LS +
Sbjct: 674 EFFEMPEKNVVSWNAMITGYSQH---GYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSH 730
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLP 387
GL E + R M + L P
Sbjct: 731 VGLVN-EGLSYFRSMSKEHGLVPKP 754
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 154/342 (45%), Gaps = 42/342 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P F SV+SAC + + G Q+HG +K S+T + ALV +Y + G L A +
Sbjct: 211 PTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQI 270
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + D ++NS+ISG +Q G
Sbjct: 271 FSKMH------------------------------------RRDRISYNSLISGLAQRGF 294
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LFEKMQ M P V S+LSACA + A GK+ H +VI+ ++ D + +
Sbjct: 295 SDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGS 354
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KC A +F + ++ WN M+ YG+ G + IF MQ E +
Sbjct: 355 LLDLYVKCFDIETAHEYF--LTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ ++L C G +D QI T + G + ++D+ + G LD AR
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKS-GFQFNVYVCSVLIDMYAKHGELDTARG 471
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+++ L E V + +++ H DL E QEME +
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQH---DLFAEALKLFQEMENQ 510
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 180/422 (42%), Gaps = 74/422 (17%)
Query: 9 PNSVTFISVISACAS-LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF SV+ AC+ Q Q+H + S ++ L+D+Y K G + A
Sbjct: 109 PDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKL 168
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L F D +W +MISG SQ G
Sbjct: 169 VFERL------------------------------------FLKDSVSWVAMISGLSQNG 192
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M + ++P+ +SVLSAC + KLG++ HG +++ L+ + +
Sbjct: 193 REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCN 252
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y + G A + F + + D +N++ISG + G + A+++F+ MQ + +
Sbjct: 253 ALVTLYSRWGNLIAAEQIFSKMHRR--DRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTM---MDDD--------------FGLKPKQE 288
KP+ + ++LSAC AG+ K L + + M D F ++ E
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 289 HF-----------GCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGACWCHLN 333
+F M+ G+ G L E+ + ++ P Y S+L C
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 334 SDLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
DLGE++ ++ + + N +L ++YA G + I Q + + + + AG
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490
Query: 393 IT 394
T
Sbjct: 491 YT 492
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 150/359 (41%), Gaps = 54/359 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T++ + C + L +++H K + ++G+ L+D+YL G + A +F
Sbjct: 9 NVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLF 68
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ S N+ WN +I+G++ + + + LF + E PD +T+
Sbjct: 69 DDIPSS-NVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTF------------- 114
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA-LKLGKETHGHVIRADLNKDESMATA 188
SVL AC+ A ++ ++ H +I +
Sbjct: 115 ----------------------ASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNP 152
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y K G A+ F++ +K D W AMISG +NG + A+ +F M + V
Sbjct: 153 LIDLYSKNGHVDLAKLVFERLFLK--DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVI 210
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK----QEHFGC--MVDLLGRSGR 302
P F +VLSAC +++F + + G K E F C +V L R G
Sbjct: 211 PTPYVFSSVLSAC-------TKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGN 263
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
L A ++ ++ Y+SL+ SD ++ M+L M+P+ T +LS
Sbjct: 264 LIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLS 322
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 158/364 (43%), Gaps = 41/364 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N TF S +SA A+ ++ G+Q+H + +K S+T L+ +Y KCG + A
Sbjct: 614 EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKR 673
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ +N+++WN MI G +G +A+ LFE + G P+ T+ ++S S +G
Sbjct: 674 EFFEMP-EKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVG 732
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F M + G+VP + V+ + L +E + + D +
Sbjct: 733 LVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCARE---FIEEMPIEPDAMIW 789
Query: 187 TALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L+S ++ +A R E++P+D A + + + Y +G+++ +M+
Sbjct: 790 RTLLSACTVHKNIEIGEFAARHL--LELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMK 847
Query: 244 QEKVKPNSA-SFVAVLSACGHAGHVDKAL-----QIFTMMDDDFGLKPKQEHFGCMVDLL 297
VK S++ V ++ HA V L QI+ +DD L + G + D
Sbjct: 848 DRGVKKEPGRSWIEVKNSI-HAFFVGDRLHPLAEQIYEYIDD---LNERAGEIGYVQD-- 901
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R + ++ +E +PT ++ E++A+ + N P +
Sbjct: 902 ----RYNLLNDVEQEQKDPTAYIH---------------SEKLAVAFGLLSLTNTMPIRV 942
Query: 358 LSNI 361
+ N+
Sbjct: 943 IKNL 946
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 96/230 (41%), Gaps = 47/230 (20%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M+ G+ +++ + C + +L K+ H + ++ + ++ + + LI +Y+ G+
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
A + FD +I + +FWN +ISG + +F LM E V P+ ++F +VL
Sbjct: 61 VDNAIKLFD--DIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVL 118
Query: 259 SACG------------HA------------------------GHVDKALQIFTMMDDDFG 282
AC HA GHVD A +F +
Sbjct: 119 RACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL----- 173
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPE----PTVSVYHSLLGAC 328
+ M+ L ++GR DEA L ++ + PT V+ S+L AC
Sbjct: 174 FLKDSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSAC 223
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TFISV+ +C+SLL +FG+QVH +K D +GTALVDMY K CL A
Sbjct: 250 KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGV 309
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F L +R+I +W + ISG++Q
Sbjct: 310 AFDRLV-NRDIFSWTVI-----------------------------------ISGYAQTD 333
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F +MQ G+ P+ + S LS C+ ++ L+ G++ H ++A D + +
Sbjct: 334 QAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGS 393
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG A F + D WN +ISGY ++G+ E A+E F +M E +
Sbjct: 394 ALVDLYGKCGCMEHAEAIFKG--LISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGI 451
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ A+F+ VLSAC G V++ + F M +G+ P EH+ CMVD+LGR+G+ +E +
Sbjct: 452 MPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVK 511
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I E+ P ++ ++LGAC H N D GE+ A KL EMEP + +++LSNI+A G
Sbjct: 512 IFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKG 571
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+DV IR ++ R + K PG S
Sbjct: 572 RWDDVRNIRALMTSRGIKKEPGCS 595
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 53/360 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T S++S ++ L++G+ +HG K +SD ++ L+ MY+K C+ +
Sbjct: 149 RPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNK 208
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + PD +WN+++SGF
Sbjct: 209 VFEAMT------------------------------------NPDLVSWNALLSGFYDSQ 232
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++F +M G P++ SVL +C+ L + GK+ H H+I+ + D+ + T
Sbjct: 233 TCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGT 292
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K A FD+ + D W +ISGY + + E AV+ F MQ+E +
Sbjct: 293 ALVDMYAKARCLEDAGVAFDRLVNR--DIFSWTVIISGYAQTDQAEKAVKYFRQMQREGI 350
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------CMVDLLGRSG 301
KPN + + LS C H ++ Q+ + K HFG +VDL G+ G
Sbjct: 351 KPNEYTLASCLSGCSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCG 403
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG-EEMAMKLQE-MEPENPTPFVILS 359
++ A + + L + +++++ H + E M L E + P+ T +LS
Sbjct: 404 CMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLS 463
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 151/360 (41%), Gaps = 55/360 (15%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MKEC + + T +V+ CA+ L+ G+ +H L L+ + D +G +LVDMY KCG
Sbjct: 42 MKEC-ETKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCG 100
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF +++ PD W++MI
Sbjct: 101 TVYDALKVFTKIR------------------------------------NPDVVAWSAMI 124
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+G Q G EA +LF M+ G P+ ++S++S ++ L+ G+ HG + +
Sbjct: 125 TGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFE 184
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ LI MYMK + F+ + D WNA++SG+ + IF
Sbjct: 185 SDNLVSNPLIMMYMKSRCVEDGNKVFEA--MTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM------DDDFGLKPKQEHFGCMV 294
M E KPN +F++VL +C + Q+ + DDDF +V
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA-------LV 295
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D+ ++ L++A L + + ++ + +D E+ ++M+ E P
Sbjct: 296 DMYAKARCLEDAGVAFDRLVNRDIFSWTVIISG---YAQTDQAEKAVKYFRQMQREGIKP 352
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 2/168 (1%)
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
MEL E L + + +WN++++G++QLG + KLF KM+ S +++VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA+ +L+ GK H +R+ DE + +L+ MY KCG A + F + I+ D
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTK--IRNPDVV 118
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
W+AMI+G + G + A E+F LM+++ +PN + +++S + G
Sbjct: 119 AWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 225/415 (54%), Gaps = 38/415 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT +++S A + G++V ++ +SD ++ +A VDMY KCG + A VF
Sbjct: 187 VTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDS 246
Query: 72 --------------------LKGSR--------------NILTWNTMIAGMMLNGRSEKA 97
L G N++TWN +I ++ NG+ ++A
Sbjct: 247 TVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEA 306
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
E+F + G P +W +M++G G EA KMQ +GM P++ +T LSA
Sbjct: 307 KEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQESGMRPNVFSITVALSA 366
Query: 158 CADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
CA+L++L G+ HG++IR L+ S+ T+L+ MY KCG S A + F + ++ + P
Sbjct: 367 CANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRR-KLFSELP 425
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+NAMIS Y G E A+ ++ ++ +KP++ +F +LSAC HAG +++A++IF+
Sbjct: 426 -LYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFSD 484
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSD 335
M G+KP EH+G MVDLL +G ++A L+ E+P EP + SLL C ++
Sbjct: 485 MVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTE 544
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E ++ +L E EP+N +V +SN YAG G W++V ++R+M+ + L K PG S
Sbjct: 545 LVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKAKGLKKQPGCS 599
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 172/393 (43%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+ H L + + D ++GT++++ Y K G + A
Sbjct: 82 EPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEM 141
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G D TWN +ISG+ Q G
Sbjct: 142 VFDRMIG------------------------------------KDVVTWNLLISGYVQQG 165
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A ++ + M+ + +++++S A KLGKE + IR D +A+
Sbjct: 166 LVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLAS 225
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A + MY KCG A++ FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 226 AAVDMYAKCGSIVDAKKVFDSTVQK--DLILWNTLLAAYAESGLSGEALRLFYEMQLESV 283
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++ ++ + G VD+A ++F M G+ P + M++ L +G +EA
Sbjct: 284 PPNVITWNLIILSLLRNGQVDEAKEMFLQMQSS-GIVPTIVSWTTMMNGLVXNGCSEEAI 342
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEMEPENPTPFVILSNI 361
+R++ E P V L AC + G + + + + + L ++
Sbjct: 343 HYLRKMQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDM 402
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G D+ + ++ + ++LP +A I+
Sbjct: 403 YAKCG---DISKAEKVFRRKLFSELPLYNAMIS 432
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 52/338 (15%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
FGR VHG K + ++L DMY KCG L A VF E+ RN++ WN
Sbjct: 2 FGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIP-ERNVVAWN------ 54
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
+++ G+ Q GM EA +L M+ G+ P+
Sbjct: 55 -----------------------------ALMVGYVQNGMNEEAIRLMCDMREEGVEPTR 85
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
V++ LSA A++ ++ GK +H + L D + T++++ Y K G +A FD+
Sbjct: 86 VTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLIDYAEMVFDR 145
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA--GH 266
K D WN +ISGY + G E A+ + LM+ EK+K + + ++S
Sbjct: 146 MIGK--DVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAARTQNSK 203
Query: 267 VDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
+ K +Q + + + D L VD+ + G + +A+++ + + ++++
Sbjct: 204 LGKEVQCYCIRHSFESDIVLASAA------VDMYAKCGSIVDAKKVFDSTVQKDLILWNT 257
Query: 324 LLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LL A + S L E EM+ E+ P VI N+
Sbjct: 258 LLAA---YAESGLSGEALRLFYEMQLESVPPNVITWNL 292
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN + +SACA+L L FGR VHG ++ S ++ I T+LVDMY KCG + A
Sbjct: 355 PNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEK 414
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ K + +N MI+ L G E+AM L+ L G KPD T+ +++S + G
Sbjct: 415 VFRR-KLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAG 473
Query: 128 MRFEAFKLFEKMQST-GMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+A ++F M S G+ P L+ V + SA AL+L +E D
Sbjct: 474 DINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEM-------PYEPD 526
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +L++ K + Q E +PD+ + + + Y G ++ V++ ++
Sbjct: 527 ARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREM 586
Query: 242 MQQEKVK 248
M+ + +K
Sbjct: 587 MKAKGLK 593
>gi|255584555|ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527215|gb|EEF29379.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 221/388 (56%), Gaps = 10/388 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +PN TF +VI + L + G+Q+H T+K+ + +G+A++D Y K
Sbjct: 93 LNIKPNEFTFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEE 152
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A N F++++ N++++ T+I G + G+ + A++LF+ + + +WN+M+ GFS
Sbjct: 153 ARNAFEDIQKP-NVVSYTTLIHGYLKKGKIDDALQLFQEMPER----NVVSWNAMVGGFS 207
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q+G EA LF +M G +P+ +++ A++++L +GK H +++ D
Sbjct: 208 QMGHNEEAVSLFIEMLREGFMPNQSTFPCAITSAANMASLGMGKSFHACAVKSLCTSDVF 267
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +L+S Y KCG + F++ PD + WNA+I G+ +NG E AV F+ M+
Sbjct: 268 VCNSLVSFYAKCGSMEDSLLVFNEL---PDRNTVSWNAVICGFAQNGRGEDAVIFFERMR 324
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
++PNS + + +L AC HAG V+K F M + K EH+ CMVDLL R GRL
Sbjct: 325 AAGLRPNSVTLLGLLCACNHAGLVEKGYMYFNQMRQEEPGILKPEHYACMVDLLSRFGRL 384
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA + + +LP +P + +LLG C H N++L + A K+ ++PE+ + +V+LSN Y
Sbjct: 385 KEAAKFLHDLPFDPGTGFWKALLGGCHIHSNAELSDLAAQKILALDPEDVSSYVMLSNAY 444
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ GRW+ V IR+ + ++ L ++PG S
Sbjct: 445 SAAGRWQQVSTIRREMKEKGLKRIPGCS 472
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 7/183 (3%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D + ++I F++ EA LF +M + P+ +V+ + L + LGK+ H
Sbjct: 63 DVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIHSSTGLKNIYLGKQLH 122
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
++ LN + +A++ Y K AR F+ +I+ + + +I GY + G+
Sbjct: 123 ARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFE--DIQKPNVVSYTTLIHGYLKKGK 180
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ A+++F QE + N S+ A++ GH ++A+ +F M + G P Q F
Sbjct: 181 IDDALQLF----QEMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLRE-GFMPNQSTFP 235
Query: 292 CMV 294
C +
Sbjct: 236 CAI 238
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 23/257 (8%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++L+ T+I R E+AM LF + KP+ T+ ++I S G++ L
Sbjct: 63 DVLSVTTLIGRFARQHRYEEAMCLFSRMLLLNIKPNEFTFATVIH--SSTGLK--NIYLG 118
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-TALISMYMK 195
+++ + M L + V SA D A KL D+ K ++ T LI Y+K
Sbjct: 119 KQLHARTMKMGLNTIVFVGSAMLDFYA-KLCSFEEARNAFEDIQKPNVVSYTTLIHGYLK 177
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF- 254
G+ A + F E+ + WNAM+ G+ + G E AV +F M +E PN ++F
Sbjct: 178 KGKIDDALQLFQ--EMPERNVVSWNAMVGGFSQMGHNEEAVSLFIEMLREGFMPNQSTFP 235
Query: 255 VAVLSACGHA----GHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARE 308
A+ SA A G A + ++ D F C +V + G ++++
Sbjct: 236 CAITSAANMASLGMGKSFHACAVKSLCTSDV--------FVCNSLVSFYAKCGSMEDSLL 287
Query: 309 LIRELPEPTVSVYHSLL 325
+ ELP+ +++++
Sbjct: 288 VFNELPDRNTVSWNAVI 304
>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
Length = 635
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 218/408 (53%), Gaps = 36/408 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F VI A + L+ G Q+H LK +S +GT L+ MY CGC+ A V
Sbjct: 96 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKV 155
Query: 69 FQELK---------------------GSRNIL---------TWNTMIAGMMLNGRSEKAM 98
F E+ G+R I +WN M+AG + G E A
Sbjct: 156 FDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAK 215
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
+F + H D +W++MI G + G E+F F ++Q GM P+ +T VLSAC
Sbjct: 216 RIFSEMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 271
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
+ + + GK HG V +A + S+ ALI MY +CG AR F+ + K +
Sbjct: 272 SQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS- 330
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W +MI+G +G+ E AV +F+ M V P+ SF+++L AC HAG +++ F+ M
Sbjct: 331 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 390
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
+ ++P+ EH+GCMVDL GRSG+L +A + I ++P PT V+ +LLGAC H N +L
Sbjct: 391 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 450
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
E++ +L E++P N V+LSN YA G+W+DV IR+ + +++ K
Sbjct: 451 EQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 498
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 57/321 (17%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+S++++C +L L Q+HGL +K +D+ L+ L CA ++ L
Sbjct: 1 LSLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI--------LHCAISISDALPY 49
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+R +L +PD +N+++ G+S+ +
Sbjct: 50 ARRLLLCFP--------------------------EPDAFMFNTLVRGYSESDEPHNSVA 83
Query: 135 LFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+F +M G V P V+ A + +L+ G + H ++ L + T LI MY
Sbjct: 84 VFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMY 143
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
CG +AR+ FD+ +P+ A WNA+I+ R + A EIFD M + N S
Sbjct: 144 GGCGCVEFARKVFDEMH-QPNLVA-WNAVITACFRGNDVAGAREIFDKM----LVRNHTS 197
Query: 254 FVAVLSACGHAGHVDKALQIFTMM--DDDFGLKPKQEHFGCMVDLLGRSGRLDEA----R 307
+ +L+ AG ++ A +IF+ M DD + M+ + +G +E+ R
Sbjct: 198 WNVMLAGYIKAGELESAKRIFSEMPHRDDVS-------WSTMIVGIAHNGSFNESFLYFR 250
Query: 308 ELIRELPEPTVSVYHSLLGAC 328
EL R P +L AC
Sbjct: 251 ELQRAGMSPNEVSLTGVLSAC 271
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 210/384 (54%), Gaps = 4/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT +S++ AC+ L L+ G+ +HG ++ D + AL+ +Y KC C+ A
Sbjct: 441 KPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQV 500
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R + +WN ++ N EK + +F + + K D TW+ +I G +
Sbjct: 501 VF-DLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNS 559
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F KMQ+ G P + S+L AC+ L++GKE H +V R + D +
Sbjct: 560 RIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTN 619
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG S +R FD IK D WN MI G +G + A+ +F+ M V
Sbjct: 620 ALVDMYAKCGGLSLSRNVFDMMPIK--DVFSWNTMIFANGMHGNGKEALSLFEKMLLSMV 677
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+SA+F VLSAC H+ V++ +QIF M D ++P+ EH+ C+VD+ R+G L+EA
Sbjct: 678 KPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAY 737
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I+ +P EPT + + L C + N +L + A KL E++P +V L NI
Sbjct: 738 GFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAK 797
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W + +IR+++ +R +TK PG S
Sbjct: 798 LWSEASKIRKLMKERGITKTPGCS 821
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 134/280 (47%), Gaps = 39/280 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + S++ AC+ L L+ G+ +HG +K D + TALV++Y C C+ A
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQT 399
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L RN++TWN++ + + G +K + +F + G KPD T
Sbjct: 400 VF-DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT------------ 446
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S+L AC+DL LK GK HG +R + +D +
Sbjct: 447 -----------------------MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCN 483
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S+Y KC A+ FD I + A WN +++ Y N EYE + +F M +++V
Sbjct: 484 ALLSLYAKCVCVREAQVVFDL--IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEV 541
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
K + ++ V+ C +++A++IF M G KP +
Sbjct: 542 KADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDE 580
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 159/360 (44%), Gaps = 55/360 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT ++SAC+ L L+ G+ +HG LK + + ALV++Y C C+ A
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQA 298
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L RN++TWN++ + + G +K + +F + G KPDP
Sbjct: 299 VF-DLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMA------------ 345
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++S+L AC+ L LK GK HG ++ + +D + T
Sbjct: 346 -----------------------MSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCT 382
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y C A+ FD + + WN++ S Y G + + +F M V
Sbjct: 383 ALVNLYANCLCVREAQTVFDLMPHR--NVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGV 440
Query: 248 KPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRS 300
KP+ + +++L AC +G V + M +D F C ++ L +
Sbjct: 441 KPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV--------FVCNALLSLYAKC 492
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVIL 358
+ EA+ + +P V+ ++ +L A + + + G M M E++ + T V++
Sbjct: 493 VCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVI 552
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 154/351 (43%), Gaps = 50/351 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N +T S++ C+ L L+ G+++HG ++ D + +A V+ Y KC C+ A
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L R+++TWN++ + + G +K + +F + +G KPDP T
Sbjct: 198 VF-DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVT------------ 244
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
V+ +LSAC+DL LK GK HG ++ + ++ ++
Sbjct: 245 -----------------------VSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSN 281
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y C A+ FD + + WN++ S Y G + + +F M V
Sbjct: 282 ALVNLYESCLCVREAQAVFDLMPHR--NVITWNSLASCYVNCGFPQKGLNVFREMGLNGV 339
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK--QEHFGC--MVDLLGRSGRL 303
KP+ + ++L AC + I F +K ++ F C +V+L +
Sbjct: 340 KPDPMAMSSILPACSQLKDLKSGKTI-----HGFAVKHGMVEDVFVCTALVNLYANCLCV 394
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
EA+ + +P V ++SL C++N ++ +EM P
Sbjct: 395 REAQTVFDLMPHRNVVTWNSLSS---CYVNCGFPQKGLNVFREMVLNGVKP 442
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F++V ACA+ +Q H + SD IG A + Y KC C+ A
Sbjct: 37 KPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARR 96
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L D TWNS+ + + G
Sbjct: 97 VFDDLVAR------------------------------------DVVTWNSLSACYVNCG 120
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +F KM + + V+S+L C+DL LK GKE HG V+R + +D +++
Sbjct: 121 FPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSS 180
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A ++ Y KC A+ FD + D WN++ S Y G + + +F M + V
Sbjct: 181 AFVNFYAKCLCVREAQTVFDLMPHR--DVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV 238
Query: 248 KPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ + +LSAC + KA+ F + G+ +V+L + E
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFAL---KHGMVENVFVSNALVNLYESCLCVRE 295
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
A+ + +P V ++SL C++N ++ +EM
Sbjct: 296 AQAVFDLMPHRNVITWNSLAS---CYVNCGFPQKGLNVFREM 334
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 25/245 (10%)
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA-DLSALKLGKETHGHVIRADLNKDESM 185
G+ EA K++ ++ G+ P +V ACA ALK+ K+ H R + D S+
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKV-KQFHDDATRCGVMSDVSI 77
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A I Y KC ARR FD ++ D WN++ + Y G + + +F M
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFD--DLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLN 135
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVDLLGR 299
KVK N + ++L C + +I M++D F V+ +
Sbjct: 136 KVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSA-------FVNFYAK 188
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTP 354
+ EA+ + +P V ++SL C++N ++ +EM +P+ T
Sbjct: 189 CLCVREAQTVFDLMPHRDVVTWNSLSS---CYVNCGFPQKGLNVFREMVLDGVKPDPVTV 245
Query: 355 FVILS 359
ILS
Sbjct: 246 SCILS 250
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 214/385 (55%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + S+I ACA L + G +VH + +K ++ +GT+LVDMY K A
Sbjct: 110 NPNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQ 169
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++WNTM++G L G E A +F+ + + D +WN+MI G+ Q G
Sbjct: 170 VFDEMP-LRDVVSWNTMVSGYCLCGDLESARRVFDQM----LERDVISWNAMIGGYVQNG 224
Query: 128 MRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A ++F +MQ G +VP + SVLSACA + AL G+ V + +
Sbjct: 225 KYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLG 284
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG ARR FD ++ D W+ MI G G +G+ + A + M +
Sbjct: 285 NALIDMYAKCGTMEEARRIFDG--MRERDVISWSTMICGSGTHGDADEAFGYYSKMLECG 342
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +F+ +LSAC HAG VDK +++F+ M ++ + PK H+GC++DLL R+GRLDEA
Sbjct: 343 VKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEA 402
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI +P EP V V+ +LLG C H + GE +A L E++ E +V ++ A +
Sbjct: 403 EDLINSMPIEPNVIVWGALLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASV 462
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR +D + + + K PG S
Sbjct: 463 GRVDDAANCWLRMQHKGIIKDPGCS 487
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 140/339 (41%), Gaps = 78/339 (23%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F +L N+ +WN +I + G E A+ F P+P +
Sbjct: 64 AQLIFAQLPNP-NVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEY-------- 114
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
TS++ ACA L A+ G + H VI++ L+ +
Sbjct: 115 -------------------------IYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIH 149
Query: 185 MATALISMYMKCGQP----------------SW---------------ARRFFDQFEIKP 213
+ T+L+ MY K +P SW ARR FDQ +
Sbjct: 150 LGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQ--MLE 207
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMI GY +NG+Y A+E+F MQ+ V P+ + V+VLSAC H G AL
Sbjct: 208 RDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVG----ALD 263
Query: 273 IFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+D G + + + ++D+ + G ++EAR + + E V + +++
Sbjct: 264 FGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMICGSG 323
Query: 330 CHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAGL 365
H ++D K+ E ++P T +LS +AGL
Sbjct: 324 THGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHAGL 362
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 203/361 (56%), Gaps = 7/361 (1%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
Q+H L ++ +D +LV Y CG + A VF E S ++++WN MI G + +
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G +A ELF+ + + +W +I ++Q+ EA ++F +MQ G+ P +
Sbjct: 156 GDLARARELFDVMPGR----NVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 211
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVLSAC DL + LG+ H V+R L ++ + A+I MY+KCG A F+ E
Sbjct: 212 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQ 271
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
K W MI+G+ +G AVE+F M++E V PN +F+AVLS C H G D
Sbjct: 272 K--SIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGR 329
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWC 330
F M + +KP+ EH+GCM+DLLGR+G L EAR LI+++P + +++ +LL A
Sbjct: 330 WYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAART 389
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
H +++LGE+ + L E+EP N +++LSNIYA RW+ V +R + DR L +PG S
Sbjct: 390 HGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 449
Query: 391 A 391
+
Sbjct: 450 S 450
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V +SV+SAC L + G VH L+ + + A++DMY+KCG + A
Sbjct: 205 EPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALE 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++I+TW TMIAG L+G +A+ELF + E P+ T+ +++S S +G
Sbjct: 265 VFEGME-QKSIVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVG 323
Query: 128 MRFEAFKLFEKMQS 141
+ F+ M S
Sbjct: 324 LTDLGRWYFKTMVS 337
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTL---KIEKQSDTMIGTALVDMYLKCGCLPCA 65
PN +TF++V+S C+ + GR + KI+ + + ++D+ + GCL A
Sbjct: 307 PNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY--GCMIDLLGRAGCLMEA 364
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSE 95
+ Q++ N W ++A +G +E
Sbjct: 365 RGLIQDMPFKANAAIWGALLAAARTHGDTE 394
>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 643
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 218/408 (53%), Gaps = 36/408 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F VI A + L+ G Q+H LK +S +GT L+ MY CGC+ A V
Sbjct: 104 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKV 163
Query: 69 FQELK---------------------GSRNIL---------TWNTMIAGMMLNGRSEKAM 98
F E+ G+R I +WN M+AG + G E A
Sbjct: 164 FDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAK 223
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
+F + H D +W++MI G + G E+F F ++Q GM P+ +T VLSAC
Sbjct: 224 RIFSEMPHR----DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSAC 279
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
+ + + GK HG V +A + S+ ALI MY +CG AR F+ + K +
Sbjct: 280 SQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS- 338
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W +MI+G +G+ E AV +F+ M V P+ SF+++L AC HAG +++ F+ M
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
+ ++P+ EH+GCMVDL GRSG+L +A + I ++P PT V+ +LLGAC H N +L
Sbjct: 399 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
E++ +L E++P N V+LSN YA G+W+DV IR+ + +++ K
Sbjct: 459 EQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 57/321 (17%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+S++++C +L L Q+HGL +K +D+ L+ L CA ++ L
Sbjct: 9 LSLLNSCKNLRALT---QIHGLFIKYGVDTDSYFTGKLI--------LHCAISISDALPY 57
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+R +L +PD +N+++ G+S+ +
Sbjct: 58 ARRLLLCFP--------------------------EPDAFMFNTLVRGYSESDEPHNSVA 91
Query: 135 LFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+F +M G V P V+ A + +L+ G + H ++ L + T LI MY
Sbjct: 92 VFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMY 151
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
CG +AR+ FD+ +P+ A WNA+I+ R + A EIFD M + N S
Sbjct: 152 GGCGCVEFARKVFDEMH-QPNLVA-WNAVITACFRGNDVAGAREIFDKM----LVRNHTS 205
Query: 254 FVAVLSACGHAGHVDKALQIFTMM--DDDFGLKPKQEHFGCMVDLLGRSGRLDEA----R 307
+ +L+ AG ++ A +IF+ M DD + M+ + +G +E+ R
Sbjct: 206 WNVMLAGYIKAGELESAKRIFSEMPHRDDVS-------WSTMIVGIAHNGSFNESFLYFR 258
Query: 308 ELIRELPEPTVSVYHSLLGAC 328
EL R P +L AC
Sbjct: 259 ELQRAGMSPNEVSLTGVLSAC 279
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/406 (34%), Positives = 218/406 (53%), Gaps = 38/406 (9%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
+CA+ L GRQ+H T ++ + + + + MY +CG A+ +F+E++ R+++
Sbjct: 21 SCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQ-YRDVV 79
Query: 80 TWNTMIAGMMLNGRSEKAMELF-EGLAHEGFKPDPAT----------------------- 115
+WN MI+G G +AM++F E +A + KPD T
Sbjct: 80 SWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVF 139
Query: 116 ----------WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
WN+M++ ++ M EA +LF +MQ G+ P + +VL +C ++SAL
Sbjct: 140 DEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALS 199
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
LGK H + R + + AL+ MY CG AR FD + D W ++IS
Sbjct: 200 LGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTR--DVVSWTSIISA 257
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
YGR+G A+++F+ M + ++P+S +FVA+L+AC HAG +D F M +F + P
Sbjct: 258 YGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAP 317
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKL 344
K EH+ CMVDLLGR+G + EA + I +P +P V+ +LLGAC H N D+G A L
Sbjct: 318 KLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSL 377
Query: 345 QEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ P+ +V+LSNIYA GRW DV +R ++ + + KLPG+S
Sbjct: 378 LRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVS 423
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP++VT +V+ +C + L G+++H + + S ++ AL+DMY CGCL A +
Sbjct: 179 EPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARD 238
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G+R++++W ++I+ +G +A++LFE + +G +PD + ++++ S G
Sbjct: 239 VFDSM-GTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAG 297
Query: 128 MRFEAFKLFEKMQS 141
+ F M S
Sbjct: 298 LLDMGKHYFYSMTS 311
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
Q G++P + +CA L LG++ H R L+ + +A + ISMY +CG+P
Sbjct: 4 QGPGLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRP 63
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVL 258
A + F++ + + D WNAMISG+ G + A+++F +L+ + KP++ + ++L
Sbjct: 64 DDAYQMFEEMQYR--DVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASIL 121
Query: 259 SACGHAGHVDKAL 271
+ G A D AL
Sbjct: 122 PSMGKARVEDIAL 134
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 226/387 (58%), Gaps = 34/387 (8%)
Query: 5 LSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
LSD +PN T SV+SAC +L L G Q+H L++K+ S +I +++ +YLKCG L
Sbjct: 258 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 317
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGFKPDPATWNSMI 120
A +F+ ++ + N++TWN MIAG K M+L E AH+
Sbjct: 318 IEAQKLFEGME-TLNLVTWNAMIAG------HAKMMDLAEDDVAAHK------------- 357
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG + L M F+K+ +GM P L +SVLS C++L AL+ G++ HG +I++ +
Sbjct: 358 SGSTALAM-------FQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 410
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + TAL+SMY KCG A + F E+ W +MI+G+ R+G + A+++F+
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAF--LEMPSRTMISWTSMITGFARHGLSQQALQLFE 468
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ +KPN +FV VLSAC HAG D+AL F +M + +KP +HF C++D+ R
Sbjct: 469 DMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRL 528
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GR++EA +++ ++ EP +++ L+ C H SDLG A +L +++P++ +V L
Sbjct: 529 GRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLL 588
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKL 386
N++ GRW+DV ++R+++ + ++ KL
Sbjct: 589 NMHISAGRWKDVSKVRKLMKEEKVGKL 615
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 167/417 (40%), Gaps = 84/417 (20%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
R +HG +K D + T LV++Y KCG + AH VF L RN+ W T++ G +
Sbjct: 83 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP-RRNVNAWTTLLTGYV 141
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPAT---------------------------------- 115
N A++LF + G P T
Sbjct: 142 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 201
Query: 116 ----WNSMISGFSQLGMRFEAFKL----------------------------FEKMQSTG 143
+S S F +L +AFK+ F M S G
Sbjct: 202 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 261
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
M P+ +TSVLSAC + L LG + H I+ + +++ +Y+KCG A+
Sbjct: 262 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 321
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGR-----------NGEYESAVEIFDLMQQEKVKPNSA 252
+ F+ E + WNAMI+G+ + + +A+ +F + + +KP+
Sbjct: 322 KLFEGMETL--NLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLF 379
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F +VLS C + +++ QI + G+ +V + + G +D+A + E
Sbjct: 380 TFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLE 438
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGLG 366
+P T+ + S++ H S ++ M+L ++P T +LS +AGL
Sbjct: 439 MPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLA 495
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KL +++S+ P +L C D + + HGH+++ ++D + T L+++Y
Sbjct: 57 KLGTRIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVY 109
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG A + FD + + W +++GY +N A+++F M + P++ +
Sbjct: 110 SKCGVMESAHKVFDNLPRRNVNA--WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYT 167
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
VL+AC ++ Q+ + + + + + RL+ A + + +
Sbjct: 168 LGIVLNACSSLQSIEFGKQVHAYL-IKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKII 226
Query: 314 PEPTVSVYHSLLGAC 328
E V + S++ +C
Sbjct: 227 KEKDVISWTSVISSC 241
>gi|224126329|ref|XP_002329527.1| predicted protein [Populus trichocarpa]
gi|222870236|gb|EEF07367.1| predicted protein [Populus trichocarpa]
Length = 377
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 198/341 (58%), Gaps = 11/341 (3%)
Query: 55 MYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
MY KCGCL A +F E+ +N++ W +M++G + G +KA ELFE D
Sbjct: 1 MYCKCGCLSVARKIFDEMP-HKNVICWTSMVSGYVNYGELDKARELFE----RSPVKDVV 55
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV 174
W +MI+G+ Q EA LF++MQ + P + ++L+ CA + AL+ G HG++
Sbjct: 56 LWTAMINGYVQFNHFDEAVALFQEMQIQRVKPDKFVLVALLTGCAQMGALEQGTWIHGYI 115
Query: 175 IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
+ D + T+LI MY KCG A R F ++ D A W ++I G NG+
Sbjct: 116 DEKGIPVDAVVGTSLIEMYSKCGCIEKALRIF--CGLREKDTATWTSIICGLAMNGKTSK 173
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
A+E+F M+Q + P+ +F+ VLSAC H G V++ + F M + ++PK EH+GC++
Sbjct: 174 ALELFSKMKQVEAIPDEVTFIGVLSACSHGGLVEEGREFFNSMTSIYNIEPKLEHYGCLI 233
Query: 295 DLLGRSGRLDEARELIREL----PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
DLLGR+G+LDEA ELI+++ E V +Y SLL AC + N +GE +A +L ++E
Sbjct: 234 DLLGRAGQLDEAEELIKKIVNANNEIIVPLYGSLLSACRIYKNVQMGERVAEQLVKIESR 293
Query: 351 NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+ + +L+NIYA GRW DV R+R+ + D + K+PG S+
Sbjct: 294 DSSVHTLLANIYASAGRWVDVNRVRREMKDLGVKKVPGCSS 334
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 108/227 (47%), Gaps = 38/227 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +++++ CA + L+ G +HG + D ++GT+L++MY KCGC+ A
Sbjct: 86 KPDKFVLVALLTGCAQMGALEQGTWIHGYIDEKGIPVDAVVGTSLIEMYSKCGCIEKALR 145
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L+ ++ TW ++I G+ +NG++ KA+ELF + PD T+ ++S S G
Sbjct: 146 IFCGLR-EKDTATWTSIICGLAMNGKTSKALELFSKMKQVEAIPDEVTFIGVLSACSHGG 204
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVT------------------------------- 152
+ E + F M S + P L+ C+
Sbjct: 205 LVEEGREFFNSMTSIYNIEPKLEHYGCLIDLLGRAGQLDEAEELIKKIVNANNEIIVPLY 264
Query: 153 -SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
S+LSAC +++G+ +++ + ++D S+ T L ++Y G+
Sbjct: 265 GSLLSACRIYKNVQMGERVAEQLVKIE-SRDSSVHTLLANIYASAGR 310
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 226/387 (58%), Gaps = 34/387 (8%)
Query: 5 LSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
LSD +PN T SV+SAC +L L G Q+H L++K+ S +I +++ +YLKCG L
Sbjct: 252 LSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWL 311
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG--LAHEGFKPDPATWNSMI 120
A +F+ ++ + N++TWN MIAG K M+L E AH+
Sbjct: 312 IEAQKLFEGME-TLNLVTWNAMIAG------HAKMMDLAEDDVAAHK------------- 351
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SG + L M F+K+ +GM P L +SVLS C++L AL+ G++ HG +I++ +
Sbjct: 352 SGSTALAM-------FQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 404
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + TAL+SMY KCG A + F E+ W +MI+G+ R+G + A+++F+
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAF--LEMPSRTMISWTSMITGFARHGLSQQALQLFE 462
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ +KPN +FV VLSAC HAG D+AL F +M + +KP +HF C++D+ R
Sbjct: 463 DMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRL 522
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GR++EA +++ ++ EP +++ L+ C H SDLG A +L +++P++ +V L
Sbjct: 523 GRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLL 582
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKL 386
N++ GRW+DV ++R+++ + ++ KL
Sbjct: 583 NMHISAGRWKDVSKVRKLMKEEKVGKL 609
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 167/417 (40%), Gaps = 84/417 (20%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
R +HG +K D + T LV++Y KCG + AH VF L RN+ W T++ G +
Sbjct: 77 ARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP-RRNVNAWTTLLTGYV 135
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPAT---------------------------------- 115
N A++LF + G P T
Sbjct: 136 QNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTS 195
Query: 116 ----WNSMISGFSQLGMRFEAFKL----------------------------FEKMQSTG 143
+S S F +L +AFK+ F M S G
Sbjct: 196 IGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDG 255
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
M P+ +TSVLSAC + L LG + H I+ + +++ +Y+KCG A+
Sbjct: 256 MKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQ 315
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGR-----------NGEYESAVEIFDLMQQEKVKPNSA 252
+ F+ E + WNAMI+G+ + + +A+ +F + + +KP+
Sbjct: 316 KLFEGMETL--NLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLF 373
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F +VLS C + +++ QI + G+ +V + + G +D+A + E
Sbjct: 374 TFSSVLSVCSNLVALEQGEQIHGQIIKS-GVLADVVVGTALVSMYNKCGSIDKASKAFLE 432
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGLG 366
+P T+ + S++ H S ++ M+L ++P T +LS +AGL
Sbjct: 433 MPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLA 489
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KL +++S+ P +L C D + + HGH+++ ++D + T L+++Y
Sbjct: 51 KLGTRIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVY 103
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG A + FD + + W +++GY +N A+++F M + P++ +
Sbjct: 104 SKCGVMESAHKVFDNLPRRNVNA--WTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYT 161
Query: 254 FVAVLSACGHAGHVDKALQIFTMM-----DDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
VL+AC ++ Q+ + D D + F + RL+ A +
Sbjct: 162 LGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSF------YSKFRRLEFAIK 215
Query: 309 LIRELPEPTVSVYHSLLGAC 328
+ + E V + S++ +C
Sbjct: 216 AFKIIKEKDVISWTSVISSC 235
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 223/389 (57%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C G +HG K+ ++ M+GTA++ MY K G
Sbjct: 68 EPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKK 127
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M +G+ + A ++F+ + D +W +MI+GF
Sbjct: 128 ARLVFDYME-DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTAMINGFV 182
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G + EA F +MQ +G+ P + + L+AC +L AL G H +V+ D +
Sbjct: 183 KKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVR 242
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR+ F + ++ WN++I G+ NG ++ F MQ+
Sbjct: 243 VSNSLIDLYCRCGCVEFARQVF--YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE 300
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ KP++ +F L+AC H G V++ L+ F +M D+ + P+ EH+GC+VDL R+GRL+
Sbjct: 301 KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLE 360
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK-LQEMEPENPTPFVILSNIY 362
+A +L++ +P +P V SLL AC H N+ + E MK L ++ ++ + +VILSN+Y
Sbjct: 361 DALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMY 420
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+WE ++R+ + L K PG S+
Sbjct: 421 AADGKWEGASKMRRKMKGLGLKKQPGFSS 449
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 118/286 (41%), Gaps = 74/286 (25%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S ++W + I + NGR +A + F + G +P+ T+ +++SG
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSG------------ 80
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLS--ALKLGKETHGHVIRADLNKDESM-ATALIS 191
C D + + LG HG+ + L+++ M TA+I
Sbjct: 81 -----------------------CGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIG 117
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL---------- 241
MY K G+ AR FD E K + WN MI GY R+G+ ++A ++FD
Sbjct: 118 MYSKRGRFKKARLVFDYMEDK--NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWT 175
Query: 242 ---------------------MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDD 279
MQ VKP+ + +A L+AC + G + L + ++
Sbjct: 176 AMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ 235
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
DF K ++DL R G ++ AR++ + + TV ++S++
Sbjct: 236 DF--KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVI 279
>gi|242073754|ref|XP_002446813.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
gi|241937996|gb|EES11141.1| hypothetical protein SORBIDRAFT_06g023080 [Sorghum bicolor]
Length = 547
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 218/402 (54%), Gaps = 21/402 (5%)
Query: 1 MKECLSDEPNS--------VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTAL 52
M CL D +S T+ ++ AC L Q GRQVH + +S ++ +L
Sbjct: 99 MLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLAASQLGRQVHAHVARSGCESHAIVQNSL 158
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
++MY +CG L A VF ++ ++ ++WNT+I+ G+ KA ELF + PD
Sbjct: 159 IEMYTRCGDLSLARKVFDGMR-EKDAVSWNTLISAHARMGQMRKARELFHSM------PD 211
Query: 113 P--ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
+W +++SG++ +G A ++F +MQ G P + +VL ACA L AL+LG+
Sbjct: 212 KTVVSWTALVSGYTAVGDFAGAVEVFRQMQMEGFEPDDVSIVAVLPACAQLGALELGRWI 271
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
+ + + + + AL+ MY KCG A + F K D W+ I G +G
Sbjct: 272 YAYCNKHGMLGKIYICNALMEMYAKCGCIEEALQLFHGMSEK--DVISWSTAIGGLAAHG 329
Query: 231 EYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
AV++F++M +E +V PN +FV +LSAC HAG +D+ L+ F M +++G++P EH
Sbjct: 330 RAREAVKLFEVMDREGRVMPNGITFVGLLSACSHAGLLDEGLRYFDRMKEEYGVEPSVEH 389
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+GC+VDLLGRSGR+ A + I +P P ++ SLL AC H + D A +L E+E
Sbjct: 390 YGCVVDLLGRSGRIQRALDTIGGMPIPPDGKIWGSLLSACRSHSDVDTAVVAAERLVELE 449
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
PE+ V+L+N+YA GRW +V R+ I R K PG S
Sbjct: 450 PEDVGNLVMLANVYAAAGRWGNVASTRKEIRSRSTRKTPGCS 491
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 54/261 (20%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L ACA L HG +R L++ +AT ++ + G+ + A R F +
Sbjct: 17 LRACATFRDLL---RAHGLAVRLCLSQSSYVATQIVHVCNGHGRAAHAARVFAH--VPAP 71
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV---------LSACG--- 262
+ NAMI Y +N + AVE++ M + P+S+ +V L ACG
Sbjct: 72 NLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPDPSSSGGFSVGDRFTYPFLLKACGGLA 131
Query: 263 --------HAGHVDKA------------LQIFTMMDDDF-------GLKPKQE-HFGCMV 294
HA HV ++ ++++T D G++ K + ++
Sbjct: 132 ASQLGRQVHA-HVARSGCESHAIVQNSLIEMYTRCGDLSLARKVFDGMREKDAVSWNTLI 190
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
R G++ +AREL +P+ TV + +L+ + + G + +ME P
Sbjct: 191 SAHARMGQMRKARELFHSMPDKTVVSWTALVSG-YTAVGDFAGAVEVFRQMQMEGFEPDD 249
Query: 355 FVILSNIYA-------GLGRW 368
I++ + A LGRW
Sbjct: 250 VSIVAVLPACAQLGALELGRW 270
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 215/386 (55%), Gaps = 14/386 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF ++ AC+ + L+ G +H K+ S+ + LV MY CG + A V
Sbjct: 134 PDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLV 193
Query: 69 FQ---ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F E G+ +WN MI G + G + A +FE + D +W+ MI+G+ Q
Sbjct: 194 FDRTPECDGA----SWNIMIGGYLKCGVFKSARRMFEAMPDR----DVVSWSVMINGYVQ 245
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E LF+ M + P+ + + LSACA L A++ G+ ++ R ++ +
Sbjct: 246 ESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRL 305
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY KCG A F + +K + W+AMI+G NG+ + A+ +F M+ +
Sbjct: 306 GTALIDMYSKCGSVERALEVFHK--MKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQ 363
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKPN +F+ +L+AC H+ VD+ F M +GLKP H CMVDL GR+G LD+
Sbjct: 364 GVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQ 423
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+ +I+ +P +P +++ +LL AC H +++LGE++ +L E++P + +V+LSNIYA
Sbjct: 424 AQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLLSNIYAA 483
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+ V +R+M+ +RQ++K PG S
Sbjct: 484 CGRWDRVAELRRMMRERQVSKTPGCS 509
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 31/246 (12%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGK 168
KPD N++I ++ +A + +M + +V P + +L AC+++ +L+LG+
Sbjct: 97 KPDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGE 156
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-------------------- 208
H HV + + + S++ L+ MY CG A FD+
Sbjct: 157 AIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCG 216
Query: 209 --------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
FE PD D W+ MI+GY + ++ + +F M EK++PN + V LS
Sbjct: 217 VFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALS 276
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
AC H G +++ I M+ ++ ++D+ + G ++ A E+ ++ E V
Sbjct: 277 ACAHLGAMEQGQWIERYMERK-NVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVL 335
Query: 320 VYHSLL 325
+ +++
Sbjct: 336 AWSAMI 341
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 41/274 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN ++ +SACA L ++ G+ + + + +GTAL+DMY KCG + A
Sbjct: 265 EPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALE 324
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++K +N+L W+ MI G+ +NG+ + A+ LF + +G KP+ T+ +++ S
Sbjct: 325 VFHKMK-EKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSK 383
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E F M S G+ P+ H H DL
Sbjct: 384 LVDEGCSFFHSMTSIYGLKPN----------------------AHHHCCMVDL------- 414
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
Y + G A+ KP+ A W A+++ +G+ E ++ + +
Sbjct: 415 ------YGRAGMLDQAQTVIKSMPFKPNS-AIWGALLNACRIHGDTELGEQVGKRLLE-- 465
Query: 247 VKPNSASFVAVLSACGHA-GHVDKALQIFTMMDD 279
+ PN +LS A G D+ ++ MM +
Sbjct: 466 LDPNHGGRYVLLSNIYAACGRWDRVAELRRMMRE 499
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 212/390 (54%), Gaps = 43/390 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +V+SACA ++ GRQVH S+ I AL+D+Y KCG
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG------- 256
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A EL EGL+++ D +WN++I G++ +
Sbjct: 257 -------------------------EVETACELLEGLSNK----DVISWNTLIGGYTHMN 287
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR----ADLNKDE 183
+ EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + +
Sbjct: 288 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNAS 347
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S+ T+LI MY KCG A + D + WNAMI G+ +G +A +IF M+
Sbjct: 348 SLRTSLIDMYAKCGDIDAAPQVSDSSAFN-RSLSTWNAMIFGFAMHGRANAAFDIFSRMR 406
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ ++P+ +FV +LSAC H+G +D IF M D+ + PK EH+GCM+DLLG SG
Sbjct: 407 KNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLF 466
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E+I +P EP ++ SLL AC H N +LGE A KL ++EPENP +V+LSNIY
Sbjct: 467 KEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIY 526
Query: 363 AGLGRWEDVGRIRQMINDRQL-TKLPGISA 391
A G+W +V +IR ++ND+ + K+PG S+
Sbjct: 527 ATAGKWNEVXKIRTLLNDKGMKKKVPGCSS 556
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 188/385 (48%), Gaps = 19/385 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF ++ +CA + G+Q+HG LK+ D + T+L+ MY + G L A V
Sbjct: 73 PNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKV 132
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ +I G G E A ++F+ + + D +WN+MISG+++ G
Sbjct: 133 FDR-SSHRDVVSYTALITGYASRGYIESAQKMFDEIPIK----DVVSWNAMISGYAETGN 187
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +LF++M T + P + +V+SACA +++LG++ H + + + A
Sbjct: 188 YKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNA 247
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A + K D WN +I GY Y+ A+ +F M +
Sbjct: 248 LIDLYSKCGEVETACELLEGLSNK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGET 305
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG---LKPKQEHFGCMVDLLGRSGRLDE 305
PN + +++L AC H G +D I +D + ++D+ + G +D
Sbjct: 306 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDA 365
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI- 361
A ++ ++S +++++ H ++ ++ ++++ +EP++ T +LS
Sbjct: 366 APQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 425
Query: 362 YAGLGRWEDVGR--IRQMINDRQLT 384
++G+ D+GR R M D +T
Sbjct: 426 HSGM---LDLGRNIFRSMRQDYNIT 447
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 152/320 (47%), Gaps = 42/320 (13%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS 156
A+ +FE + +P+ WN M G + A KL+ M S G++P+ +L
Sbjct: 28 AISVFETIP----EPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLK 83
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF------- 209
+CA K G++ HGHV++ + D + T+LISMY + G+ A++ FD+
Sbjct: 84 SCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVS 143
Query: 210 ----------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
EI D WNAMISGY G Y+ A+E+F M + V
Sbjct: 144 YTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNV 203
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ ++ V+SAC +G ++ Q+ + ++D G + ++DL + G ++ A
Sbjct: 204 KPDESTMATVVSACAQSGSIELGRQVHSWINDH-GFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNI--YA 363
EL+ L V +++L+G + H+N L +E + QEM E P +LS + A
Sbjct: 263 ELLEGLSNKDVISWNTLIGG-YTHMN--LYKEALLLFQEMLRSGETPNDVTMLSILPACA 319
Query: 364 GLGRWEDVGRIRQMINDRQL 383
LG D+GR + D++L
Sbjct: 320 HLGAI-DIGRWIHVYIDKKL 338
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 114/251 (45%), Gaps = 15/251 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK----QSDTMIGTALVDMYLKCGCL 62
+ PN VT +S++ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 304 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDI 363
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A V +R++ TWN MI G ++GR+ A ++F + G +PD T+ ++S
Sbjct: 364 DAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423
Query: 123 FSQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRAD 178
S GM +F M Q + P L+ C+ +L L KE +
Sbjct: 424 CSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSG------LFKEAEEMINTMP 477
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D + +L+ G F + +I+P++P + + + Y G++ +
Sbjct: 478 MEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXK 537
Query: 238 IFDLMQQEKVK 248
I L+ + +K
Sbjct: 538 IRTLLNDKGMK 548
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 224/391 (57%), Gaps = 21/391 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
P S TF ++ SACA++ + G Q+H TL + SD + A++DMY+KCG L CA
Sbjct: 107 PISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARM 166
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++W +I G A +LF+GL + D TW +M++G++Q
Sbjct: 167 VFDEMP-ERDVISWTGLIVAYTRIGDMRAARDLFDGLPVK----DMVTWTAMVTGYAQNA 221
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK------ETHGHVIRADLNK 181
M +A ++F +++ G+ + V+SACA L A K E+ G +
Sbjct: 222 MPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESSGF----GVGD 277
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFD 240
+ + +ALI MY KCG A +D F+ + F +++MI G+ +G +A+++F
Sbjct: 278 NVLVGSALIDMYSKCGNVEEA---YDVFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFY 334
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + VKPN +FV VL+AC HAG VD+ Q+F M+ +G+ P E + CM DLL R+
Sbjct: 335 DMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRA 394
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L++A +L+ +P E +V+ +LLGA H N D+ E + +L E+EP+N +++LS
Sbjct: 395 GYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLS 454
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N YA GRW+DV ++R+++ ++ L K PG S
Sbjct: 455 NTYASAGRWDDVSKVRKLLREKNLKKNPGWS 485
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 131/251 (52%), Gaps = 16/251 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGL--TLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
E + VT + VISACA L ++ + + + + ++G+AL+DMY KCG + A
Sbjct: 239 EIDEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEA 298
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
++VF+ ++ RN+ ++++MI G ++GR+ A++LF + G KP+ T+ +++ S
Sbjct: 299 YDVFKGMR-ERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSH 357
Query: 126 LGMRFEAFKLFEKMQS-TGMVPSLK---CVTSVLSACADL-SALKLGKETHGHVIRADLN 180
G+ + +LF M+ G+ P+ + C+T +LS L AL+L V +
Sbjct: 358 AGLVDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQL-------VETMPME 410
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D ++ AL+ G P A + FE++PD+ + + + Y G ++ ++
Sbjct: 411 SDGAVWGALLGASHVHGNPDVAEIASKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVR 470
Query: 240 DLMQQEKVKPN 250
L++++ +K N
Sbjct: 471 KLLREKNLKKN 481
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+P W ++I ++ G +A + M+ + P +++ SACA + LG +
Sbjct: 72 PNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQL 131
Query: 171 HGH-VIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H ++ + D + A+I MY+KCG AR FD+
Sbjct: 132 HAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGD 191
Query: 209 -------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
F+ P D W AM++GY +N A+E+F ++ E V+ + + V V+SA
Sbjct: 192 MRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISA 251
Query: 261 CGHAGHVDKALQIFTMMDDD-FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G A I + + FG+ ++D+ + G ++EA ++ + + E V
Sbjct: 252 CAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVF 311
Query: 320 VYHSLL 325
Y S++
Sbjct: 312 SYSSMI 317
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 73/180 (40%), Gaps = 8/180 (4%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP---SWARRFFD 207
V +L C S+L KE H + +L + + T L+ + S+ R F
Sbjct: 11 VVRILERC---SSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFS 67
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
Q + +P W A+I Y G A+ + M++ +V P S +F A+ SAC H
Sbjct: 68 Q--LHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHS 125
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
Q+ G ++D+ + G L AR + E+PE V + L+ A
Sbjct: 126 ALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVA 185
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 207/387 (53%), Gaps = 42/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT SV+S C + L+ GR VHGL++K+ DT + ALV MY KC
Sbjct: 340 KPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKC-------- 390
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A + SEK D WNS+ISGFSQ G
Sbjct: 391 -------------YQNRDAKYVFEMESEK---------------DIVAWNSIISGFSQNG 422
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-- 185
EA LF +M S + P+ V S+ SACA L +L +G H + ++ S+
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL+ Y KCG P AR FD E K + W+AMI GYG+ G+ ++E+F+ M ++
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEK--NTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ KPN ++F ++LSACGH G V++ + F+ M D+ P +H+ CMVD+L R+G L++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I ++P +P V + + L C H DLGE + K+ ++ P++ + +V++SN+YA
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +R ++ R L+K+ G S
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHST 687
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 157/358 (43%), Gaps = 52/358 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T+ ++I AC L L G+ HG +K + + + T+L+DMY+KCG + A VF
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E D W +MI G++ G
Sbjct: 301 NEHS------------------------------------HVDLVMWTAMIVGYTHNGSV 324
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF+KM+ + P+ + SVLS C + L+LG+ HG I+ + D ++A AL
Sbjct: 325 NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANAL 383
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC Q A+ F+ K D WN++ISG+ +NG A+ +F M E V P
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEK--DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTP 441
Query: 250 NSASFVAVLSACGHAGH--VDKALQIFTMMDDDFG-LKPKQEHFG-CMVDLLGRSGRLDE 305
N + ++ SAC G V +L +++ G L H G ++D + G
Sbjct: 442 NGVTVASLFSACASLGSLAVGSSLHAYSV---KLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILS 359
AR + + E + +++G ++ +L EEM K Q +P T ILS
Sbjct: 499 ARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ--KPNESTFTSILS 554
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 120/253 (47%), Gaps = 39/253 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ + F + AC L L G+++H +K+ D ++ T L+DMY KCG + AH VF
Sbjct: 141 DDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVF 199
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ RN++ W SMI+G+ + +
Sbjct: 200 NDIT-LRNVVCWT-----------------------------------SMIAGYVKNDLC 223
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF +M+ ++ + +++ AC LSAL GK HG ++++ + + T+L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY+KCG S ARR F+ E D W AMI GY NG A+ +F M+ ++KP
Sbjct: 284 LDMYVKCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 250 NSASFVAVLSACG 262
N + +VLS CG
Sbjct: 342 NCVTIASVLSGCG 354
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 150/360 (41%), Gaps = 55/360 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++S C ++ L RQ HG+ D I T LV +Y G A VF ++
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIP-EP 105
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+ W M+ LN S + ++L++ L GF+ D +
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVF-------------------- 145
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+ L AC +L L GK+ H +++ + D + T L+ MY KC
Sbjct: 146 ---------------SKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKC 189
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G+ A + F+ ++ + W +MI+GY +N E + +F+ M++ V N ++
Sbjct: 190 GEIKSAHKVFNDITLR--NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV----DLLGRSGRLDEARELIRE 312
++ AC + + + +K E C+V D+ + G + AR + E
Sbjct: 248 LIMACTKLSALHQGKWFHGCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNIYAGLGRWEDV 371
+ ++ +++ + H N + E +++ Q+M+ P V ++++ +G G E++
Sbjct: 303 HSHVDLVMWTAMIVG-YTH-NGSVNEALSL-FQKMKGVEIKPNCVTIASVLSGCGLIENL 359
>gi|147841473|emb|CAN62101.1| hypothetical protein VITISV_033310 [Vitis vinifera]
Length = 396
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 209/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPB +T +V+S CA L L+ G ++ L S+ ++ TA+++MY+KCG +
Sbjct: 3 EPBEITLATVLSICAKLGDLEMGLRIKKLXDNKNLGSNMIVSTAMLEMYVKCGAVDDGRL 62
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D W++MI+G++Q G
Sbjct: 63 VFDHMA------------------------------------RRDVVXWSAMIAGYAQNG 86
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LFE M+S + P+ + SVLSACA L +++ G+ +V L + +A+
Sbjct: 87 RSNEALELFEXMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVAS 146
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ FD+ + D WN+MI G NG E A+ +++ M++ +V
Sbjct: 147 ALLGMYSKCGNIIKARQIFDKLPQR--DNVTWNSMIMGLAINGFAEDAIALYNRMKEIEV 204
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ +FV +L+AC HAGHV+ L+ F M D + P EHF C+VDL RSGRL +A
Sbjct: 205 KPNNITFVGLLTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAY 264
Query: 308 ELI-RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I R EP V ++ +LL A HLN +L E KL E+EP+N +VILSNIYA
Sbjct: 265 EFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAS 324
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ ++R+++ D+++ K S
Sbjct: 325 RWQEALKVRKLMKDKRVQKAAAYS 348
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 211/385 (54%), Gaps = 21/385 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF SV+ AC L +G ++H +K S++ +G +L+DMY KCG + A
Sbjct: 438 EPDEFTFGSVLKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ N+ ME E + ++ + +WNS+ISG+
Sbjct: 497 IHSRFFQRTNV----------------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 540
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M G+ P +VL CA+L++ LGK+ H VI+ +L D +++
Sbjct: 541 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISS 600
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG +R F++ + D WNAMI GY +G+ E A+++F+ M E +
Sbjct: 601 TLVDMYSKCGDLHDSRLMFEKSLRR--DFVTWNAMICGYAHHGKGEEAIQLFERMILENI 658
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+++L AC H G +DK L+ F MM D+GL P+ H+ MVD+LG+SG++ A
Sbjct: 659 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNS-DLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELIRE+P E ++ +LLG C H N+ ++ EE L ++P++ + + +LSN+YA
Sbjct: 719 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 778
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G WE V +R+ + +L K PG S
Sbjct: 779 GMWEKVSDLRRNMRGFKLKKEPGCS 803
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV+ +CA+L L+ G Q+H LK + +D ++ TA +DMY KC + A +F +
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDK-- 299
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
S N LN +S AM I+G+SQ F+A
Sbjct: 300 -SEN------------LNRQSYNAM---------------------ITGYSQEEHGFKAL 325
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF ++ S+G+ ++ V ACA + L G + + I++ L+ D +A A I MY
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMY 385
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KC + A R FD E++ D WNA+I+ + +NG+ + +F M + +++P+ +
Sbjct: 386 GKCQALAEAFRVFD--EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAREL 309
F +VL AC G + ++I + + G+ GC ++D+ + G ++EA ++
Sbjct: 444 FGSVLKACT-GGSLGYGMEIHSSIVKS-GMASNSS-VGCSLIDMYSKCGMIEEAEKI 497
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 155/355 (43%), Gaps = 55/355 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF ++ C+ L G Q+HG+ +++ +D + +AL+DMY K
Sbjct: 135 EFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAK--------- 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G R + +++ +F+G+ + + +W+++I+G Q
Sbjct: 186 ------GKRFV-----------------ESLRVFQGIP----EKNSVSWSAIIAGCVQNN 218
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A K F++MQ S SVL +CA LS L+LG + H H +++D D + T
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A + MY KC A+ FD+ E + +NAMI+GY + A+ +F + +
Sbjct: 279 ATLDMYAKCDNMQDAQILFDKSE--NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLGRSGRL 303
+ S V AC + + LQI+ D +K C+ +D+ G+ L
Sbjct: 337 GFDEISLSGVFRACALVKGLSEGLQIY-----DLAIKSSLSLDVCVANAAIDMYGKCQAL 391
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE-----MAMKLQEMEPENPT 353
EA + E+ +++++ A H + G E ++M +EP+ T
Sbjct: 392 AEAFRVFDEMRRRDAVSWNAIIAA---HEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 141/363 (38%), Gaps = 59/363 (16%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ V ACA + L G Q++ L +K D + A +DMY KC L A VF
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ R+ ++WN +IA NG+ + + LF + +PD T+
Sbjct: 399 DEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG------------ 445
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
SVL AC +L G E H ++++ + + S+ +L
Sbjct: 446 -----------------------SVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 481
Query: 190 ISMYMKCGQPSWAR----RFFDQFEIKPDDPAF--------------WNAMISGYGRNGE 231
I MY KCG A RFF + + WN++ISGY +
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
E A +F M + + P+ ++ VL C + QI + L+
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDVYISS 600
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+VD+ + G L ++R + + +++++ H GEE + M EN
Sbjct: 601 TLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH---GKGEEAIQLFERMILEN 657
Query: 352 PTP 354
P
Sbjct: 658 IKP 660
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 7/242 (2%)
Query: 21 CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILT 80
CA L+ G+Q H + + T + L+ +Y A VF + R++++
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMP-LRDVVS 74
Query: 81 WNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQ 140
WN MI G + KA F + D +WNSM+SG+ Q G ++ ++F M
Sbjct: 75 WNKMINGYAKSNNMVKASFFFNMMPVR----DVVSWNSMLSGYLQNGETLKSIEVFVDMG 130
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
G + +L C+ L LG + HG V+R + D A+AL+ MY K +
Sbjct: 131 RAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFV 190
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
+ R F I + W+A+I+G +N A++ F MQ+ + + + +VL +
Sbjct: 191 ESLRVFQG--IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 248
Query: 261 CG 262
C
Sbjct: 249 CA 250
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 77/200 (38%), Gaps = 30/200 (15%)
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------- 208
CA AL+LGK+ H H+I + + L+ +Y A FD+
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 209 -------------------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
F + P D WN+M+SGY +NGE ++E+F M + +
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ +F +L C +QI ++ G ++D+ + R E+
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVV-VRVGCDTDVVAASALLDMYAKGKRFVESLR 194
Query: 309 LIRELPEPTVSVYHSLLGAC 328
+ + +PE + +++ C
Sbjct: 195 VFQGIPEKNSVSWSAIIAGC 214
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 210/386 (54%), Gaps = 40/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAH 66
+ + +T + V+S+CA L L+ GR++H ++ + D +G ALVDMYLKCG A
Sbjct: 223 QADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFAR 282
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VFQE+ +N+++W NSMISG +Q
Sbjct: 283 KVFQEMP-VKNVVSW-----------------------------------NSMISGLAQK 306
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G E+ +F KMQ G+ P + +VL++CA+L L+LGK H ++ R + D +
Sbjct: 307 GQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIG 366
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KCG A F K D + AMI G +G+ A+++F M +
Sbjct: 367 NALVDMYAKCGSIDQACWVFQAMNRK--DVYSYTAMIVGLAMHGQGGKALDLFSEMPKMG 424
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +FV VL+AC H G V++ + F M + L+P+ EH+GCMVDLLGR+G ++EA
Sbjct: 425 IEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEA 484
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E IR +P EP V +LLGAC H +LGE + K++++EP +V++SNIY+
Sbjct: 485 EEFIRNMPIEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSA 544
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
RW D ++R+ + +R L K PG S+
Sbjct: 545 NRWRDALKLRKTMKERNLEKTPGCSS 570
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 163/326 (50%), Gaps = 44/326 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ ACA ++ G +VHG +K+ SD + L+ MY C + A V
Sbjct: 123 PDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKV 182
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R++++W TMI G + G + + + LF F G
Sbjct: 183 F-DTSPQRDLVSWTTMIQGYVKMGFAREGVGLF---------------------FEMCG- 219
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADLNKDESMAT 187
E +Q+ GM + VLS+CA L L+LG++ H ++IR +++N D +
Sbjct: 220 --------ENLQADGMT-----LVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGN 266
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY+KCG ++AR+ F + +K + WN+MISG + G+++ ++ +F MQ+ V
Sbjct: 267 ALVDMYLKCGDANFARKVFQEMPVK--NVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV 324
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDE 305
KP+ + VAVL++C + G ++ + +D + + + + F +VD+ + G +D+
Sbjct: 325 KPDDVTLVAVLNSCANLGVLELGKWVHAYLDRN---QIRADGFIGNALVDMYAKCGSIDQ 381
Query: 306 ARELIRELPEPTVSVYHSLLGACWCH 331
A + + + V Y +++ H
Sbjct: 382 ACWVFQAMNRKDVYSYTAMIVGLAMH 407
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+ VT ++V+++CA+L L+ G+ VH + + ++D IG ALVDMY KCG +
Sbjct: 322 LGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQ 381
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VFQ + +++ ++ MI G+ ++G+ KA++LF + G +PD T+ +++ S
Sbjct: 382 ACWVFQAM-NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 440
Query: 125 QLGMRFEAFKLFEKMQS 141
+G+ E K FE M +
Sbjct: 441 HVGLVEEGRKYFEDMST 457
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 11/283 (3%)
Query: 111 PDPATWNSMISGFSQLGM-RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P+ +N++I G + E ++++M S G+VP + VL ACA+ A++ G+E
Sbjct: 87 PNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEE 146
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG I+ L D ++ L+ MY C AR+ FD + D W MI GY +
Sbjct: 147 VHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVSWTTMIQGYVKM 204
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQ 287
G V +F M E ++ + + V VLS+C G + + L + + + + L
Sbjct: 205 GFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV 264
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+ +VD+ + G + AR++ +E+P V ++S++ M K+Q +
Sbjct: 265 GN--ALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 322
Query: 348 --EPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPG 388
+P++ T +L N A LG E +G+ DR + G
Sbjct: 323 GVKPDDVTLVAVL-NSCANLGVLE-LGKWVHAYLDRNQIRADG 363
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 224/399 (56%), Gaps = 21/399 (5%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M E S EPN TF SV AC L+ GRQVHGL +K SD + + +V MYL CG
Sbjct: 79 MVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCG 138
Query: 61 CLPCAHNVF--------------QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
+ AH +F ++ + +++ WN MI G + G E A LF+ +
Sbjct: 139 VMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQ 198
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+WN MI+G++Q G EA ++F +MQ + P+ + SVL A + L AL+L
Sbjct: 199 RSV----VSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALEL 254
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
GK H + +R ++ D+ + +ALI MY KCG A + F+ + + W+ +I+G
Sbjct: 255 GKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGL 312
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+G + ++ F+ M++ V P+ +++ +LSAC HAG V++ F M GL+P+
Sbjct: 313 AMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPR 372
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
EH+GCMVDLLGR+G L+E+ ELI +P +P ++ +LLGAC H N ++G+ +A L
Sbjct: 373 IEHYGCMVDLLGRAGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLM 432
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
E+ P + +V LSNIYA LG WE V ++R M+ + ++
Sbjct: 433 ELAPHDSGSYVALSNIYASLGNWEGVAKVRLMMKEMDVS 471
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 66/317 (20%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+P+ ++N++I S+ +A +F E ++ + P+ SV AC L+ G+
Sbjct: 50 RPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGR 109
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF---------------------- 206
+ HG ++ L+ DE + + ++ MY+ CG A R F
Sbjct: 110 QVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGD 169
Query: 207 ---------------------DQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQ 244
+ F+ P WN MI+GY ++G ++ AVE+F MQ
Sbjct: 170 VVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQM 229
Query: 245 EKVKPNSASFVAVLSACGHAGHVD--KALQIFTM-----MDDDFGLKPKQEHFGCMVDLL 297
+V PN + V+VL A G ++ K + ++ + +DD G ++D+
Sbjct: 230 AEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLG--------SALIDMY 281
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPF 355
+ G +++A ++ LP+ V + +++ H L M+ + P + T
Sbjct: 282 AKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYI 341
Query: 356 VILSNI-YAGL---GRW 368
+LS +AGL GRW
Sbjct: 342 GLLSACSHAGLVNEGRW 358
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 213/384 (55%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT I+ +S C + L+ GR++HG + AL+DMY+KCG L A +
Sbjct: 225 RPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKS 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ R +++W TMI G G + A ++F+ + P WN++++G+ Q
Sbjct: 285 VFERIE-HRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFP----WNALMTGYVQCK 339
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ +VP + ++L+AC+ L AL++G H ++ + L ++ T
Sbjct: 340 QCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGT 399
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A F EI + W AMI G +G A+E F M +
Sbjct: 400 SLIDMYAKCGNIEKAIHIFK--EIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQ 457
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F+ VLSAC HAG V + + F++M+ + L+ K +H+ CM+DLLGR+G LDEA
Sbjct: 458 KPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAE 517
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ +P EP V+ ++ AC N LGE+ AMKL E++P + +V+L+N+YA
Sbjct: 518 QLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEAN 577
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+ ++R M+ + K+PG S
Sbjct: 578 MRKKADKVRAMMRHLGVEKVPGCS 601
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 169/372 (45%), Gaps = 31/372 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +TF ++ ACA L +G L++ SD + A G + A
Sbjct: 122 RPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIRGPMEDARR 181
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISGFSQ 125
+F R++++WNT+I G + G +A+ELF + E +PD T + +SG Q
Sbjct: 182 LFDR-SPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQ 240
Query: 126 -----LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
LG R F + S G+ +++ + +++ +L++ K V +
Sbjct: 241 MRDLELGRRLHGF-----VDSDGVSCTVRLMNALMDMYIKCGSLEMAKS----VFERIEH 291
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIF 239
+ T +I + K G AR+ FD+ P+ F WNA+++GY + + + A+ +F
Sbjct: 292 RTVVSWTTMIVGFAKFGLMDDARKVFDEM---PERDVFPWNALMTGYVQCKQCKEALSLF 348
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD---FGLKPKQEHFGCMVDL 296
MQ+ V P+ + V +L+AC G ++ + + ++ F + ++D+
Sbjct: 349 HEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTS----LIDM 404
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTP 354
+ G +++A + +E+PE + +++ H +++ E + E+ +P+ T
Sbjct: 405 YAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITF 464
Query: 355 FVILSN-IYAGL 365
+LS +AGL
Sbjct: 465 IGVLSACCHAGL 476
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 217/413 (52%), Gaps = 36/413 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F V+ A A+ L+ G Q+H LK S + T L+ MY +CGC+ A V
Sbjct: 271 PDSFSFAFVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKV 330
Query: 69 FQEL---------------------KGSRNIL---------TWNTMIAGMMLNGRSEKAM 98
F E+ G+R I +WN M+AG + G E A
Sbjct: 331 FDEMPQPNLVAWNAVVTACFRGNDVSGAREIFDKMLVRNHTSWNVMLAGYIKAGELECAK 390
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
+F + H D +W++MI GFS G E+F F ++ M P+ +T VLSAC
Sbjct: 391 RIFSEMPHR----DDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSAC 446
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
+ A + GK HG V ++ + S+ ALI MY +CG AR F+ + K +
Sbjct: 447 SQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVS- 505
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W +MI+G +G E A+ IF+ M + V P+ SF+++L AC HAG + + F+ M
Sbjct: 506 WTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMK 565
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
+ ++P EH+GCMVDL GRSG+L +A I ++P PT V+ +LLGAC H N +L
Sbjct: 566 RVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELA 625
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E++ +L E++P N V+LSN+YA G+W+DV IR+ + +++ K+ S
Sbjct: 626 EQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWS 678
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGK 168
+PD +N+++ G+S+ + +F +M G + P V+ A A+ +L+ G
Sbjct: 234 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGF 293
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+ H ++ L+ +AT LI MY +CG +AR+ FD E+ + WNA+++ R
Sbjct: 294 QMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFD--EMPQPNLVAWNAVVTACFR 351
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM--DDDFGLKPK 286
+ A EIFD M + N S+ +L+ AG ++ A +IF+ M DD
Sbjct: 352 GNDVSGAREIFDKM----LVRNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVS---- 403
Query: 287 QEHFGCMVDLLGRSGRLDEA----RELIRELPEPTVSVYHSLLGAC 328
+ M+ +G +E+ REL+R P +L AC
Sbjct: 404 ---WSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSAC 446
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 205/391 (52%), Gaps = 39/391 (9%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
K+ +S PNSVT +VISA A L +L GR VH + +K+ ++ ALVDMY KC
Sbjct: 315 KKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQA 374
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A+++F + D WNSM++
Sbjct: 375 LPEANSIFGRI------------------------------------LIKDVVAWNSMMA 398
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+S+ GM E+ LF +M+ G+ P V + LSAC L+ L +GK H + I+
Sbjct: 399 GYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS 458
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + TAL+++Y KC A+R F+ ++ + W+AMI GYG G+ ++++F+
Sbjct: 459 NIYVNTALLNLYSKCADLPSAQRVFN--DMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNE 516
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M +E + PN F ++LSAC H G V + F M F + P +H+ CMVD++ R+G
Sbjct: 517 MLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAG 576
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
L+EA E I+ +P + +SV+ S L C H + GEE K+ + PE P +V++SN
Sbjct: 577 NLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSN 636
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+Y GRW+ IR+ + ++ L KLPG S+
Sbjct: 637 LYTSYGRWDKSQTIRRWMQEQGLVKLPGCSS 667
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 137/325 (42%), Gaps = 40/325 (12%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+ C + V + AC ++GR++H +K +D + +LVDMY K G
Sbjct: 114 RRCPAAAQADVVLSLALKACVRSADFRYGRRLHCDVVK-AGGADGFVMNSLVDMYAKAGD 172
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A VF + RN+++W SM+S
Sbjct: 173 LENARKVFDRVP-ERNVVSWT-----------------------------------SMLS 196
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G Q G+ E LF +M+ + PS + SVL+ACA L L G+ HG VI+ L+
Sbjct: 197 GSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLST 256
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ ++ +L+ MY KC + ARR FD+ E D W AMI GY +N A+++F
Sbjct: 257 NSFISASLLDMYAKCEKVEDARRVFDELEFV--DIVLWTAMIVGYTQNKRPLDALQLFLH 314
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
+ + PNS + V+SA H+ + + G +VD+ +
Sbjct: 315 KKFVSIVPNSVTIATVISASAQLRHLPLGRSVHA-IGVKLGTMESDVVRNALVDMYAKCQ 373
Query: 302 RLDEARELIRELPEPTVSVYHSLLG 326
L EA + + V ++S++
Sbjct: 374 ALPEANSIFGRILIKDVVAWNSMMA 398
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 210/384 (54%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF ++ A LL G VHG +K + D + + L+ MY + G L H V
Sbjct: 109 PDNYTFTFLVRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRV 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++ M++ G A +LF+ ++H+ DP WN+MISG+ Q G
Sbjct: 169 FSSI-CEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHK----DPIAWNAMISGYVQCGQ 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF MQ G+ + + SVLSAC+ L AL G+ H ++ R L ++ TA
Sbjct: 224 SREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A F + +K + W++ I G NG E +E+F LM+Q+ V+
Sbjct: 284 LIDMYAKCGNMNKAMEVF--WGMKEKNVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQ 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV+VL C G V++ + F M +G++P+ EH+GCMVDL GR+G LDEA
Sbjct: 342 PNEITFVSVLRGCSVVGLVEEGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALN 401
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P P V + +LL AC + N ++GE + K+ E+E +N +V+LSNIYA
Sbjct: 402 FINSMPVRPHVGAWGALLNACKIYRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKD 461
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V +RQ +N + + K PG S
Sbjct: 462 WDRVSNVRQTMNVKGVRKQPGCSV 485
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 109/251 (43%), Gaps = 36/251 (14%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEK-MQSTG-MVPSLKCVTSVLSACADLSALKLG 167
P T+NSMI S+ +F + + + S G + P T ++ A L A G
Sbjct: 71 NPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLAHGTG 130
Query: 168 KETHGHVIRADLNKDESMATALISMY-------------------------------MKC 196
HG ++ D + + LI MY K
Sbjct: 131 SSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKM 190
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G +AR+ FD+ K DP WNAMISGY + G+ A+ +F+LMQ+E VK N S V+
Sbjct: 191 GDVGFARKLFDKMSHK--DPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVS 248
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
VLSAC H G +D+ ++ + L+ ++D+ + G +++A E+ + E
Sbjct: 249 VLSACSHLGALDQGRWAHAYIERN-KLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEK 307
Query: 317 TVSVYHSLLGA 327
V + S +G
Sbjct: 308 NVYTWSSAIGG 318
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 208/352 (59%), Gaps = 8/352 (2%)
Query: 40 IEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAME 99
I + + A++ Y++CG L A +F++ ++++ W MI G M GR A
Sbjct: 94 IMPTKNVVTWNAMISGYVECGDLDSALKLFEKAP-FKSVVAWTAMITGYMKLGRIGLAER 152
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
LFE + + TWN+MI+G+ + + KLF M G+ P+ ++S L C+
Sbjct: 153 LFEKMPEKNL----VTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCS 208
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
+LSAL+LG++ H V ++ L D + T+LISMY KCG + F Q + D W
Sbjct: 209 ELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQ--VPRRDVVTW 266
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
NAMISGY ++GE + A+ +FD M ++ +KP+ +FVAVL AC HAG D ++ F M
Sbjct: 267 NAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAGFTDLGVKYFHSMAK 326
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGE 338
D+GL K +H+ CMVDLLGR+G+L EA +LI ++P +P +V+ +LLGAC H N+++ E
Sbjct: 327 DYGLVAKPDHYTCMVDLLGRAGKLVEAVDLIEKMPFKPHAAVFGTLLGACRIHKNTEMAE 386
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ KL ++P + T +V L+N+YA RW+ V R+R+ + ++ K PG S
Sbjct: 387 FASQKLLNLDPASATGYVQLANVYAATKRWDHVARVRKSMKSCKVVKTPGYS 438
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T S + C+ L LQ GRQVH L K DT GT+L+ MY KCG L
Sbjct: 194 QPNSSTLSSALLGCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWK 253
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI-----SG 122
+F ++ R+++TWN MI+G +G +KA+ LF+ + +G KPD T+ +++ +G
Sbjct: 254 LFVQVP-RRDVVTWNAMISGYAQHGEGKKALGLFDEMIEKGMKPDWITFVAVLMACNHAG 312
Query: 123 FSQLGMRF 130
F+ LG+++
Sbjct: 313 FTDLGVKY 320
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 48/295 (16%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
++ L +KI + D + ++ Y++ + A F+++ ++ +WNTMI G
Sbjct: 24 KEAQELFVKIP-EPDAVSYNTMLSCYVRNSNMERAQAFFEDMP-IKDTPSWNTMITGFAQ 81
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
N + +KA +LF + + + TWN+MISG+ + G A KLFEK +V
Sbjct: 82 NQQMDKARDLFLIMPTK----NVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVA---- 133
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
TA+I+ YMK G+ A R F++
Sbjct: 134 -----------------------------------WTAMITGYMKLGRIGLAERLFEKMP 158
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
K + WNAMI+GY N E V++F M ++PNS++ + L C +
Sbjct: 159 EK--NLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALLGCSELSALQLG 216
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
Q+ ++ L ++ + + G L++ +L ++P V +++++
Sbjct: 217 RQVHQLVCKS-PLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVTWNAMI 270
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 52/206 (25%)
Query: 76 RNILTWNTMIAGM-MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+ +TWN+++AGM G+ ++A ELF + +PD ++N+M+S + + A
Sbjct: 4 KTTVTWNSVLAGMSKKRGKLKEAQELFVKIP----EPDAVSYNTMLSCYVRNSNMERAQA 59
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
FE M KD +I+ +
Sbjct: 60 FFEDMPI---------------------------------------KDTPSWNTMITGFA 80
Query: 195 KCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+ Q AR D F I P + WNAMISGY G+ +SA+++F+ + V +
Sbjct: 81 QNQQMDKAR---DLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSV----VA 133
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDD 279
+ A+++ G + A ++F M +
Sbjct: 134 WTAMITGYMKLGRIGLAERLFEKMPE 159
>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
Length = 582
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 207/391 (52%), Gaps = 40/391 (10%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E L E N VT + ++ C L G VHG +K D+ +G L+ MY+K G
Sbjct: 104 MRE-LGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSG 162
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ C +F E+ + ++TWN MI G NG + +EL++ + +GF PDP T
Sbjct: 163 EIDCGRKLFDEMP-RKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLT----- 216
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ VLS+CA L AL +GKE + +
Sbjct: 217 ------------------------------LVGVLSSCAHLGALSVGKEVERKMEGFGFS 246
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + AL++MY +CG AR FD +K W A+I GYG +G+ E AV +FD
Sbjct: 247 SNPFLNNALVNMYARCGNLKKARDIFDGMPVK--SVVSWTAIIGGYGMHGQGEVAVGLFD 304
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + +KP+ +FV+VLSAC HAG +K L F +M+ +GL+P EH+ CMVDLLGR+
Sbjct: 305 EMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRA 364
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GRL+EARELI + +++ +LLGAC H N +L E ++ E+EP N +V+LS
Sbjct: 365 GRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTNTGYYVLLS 424
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+Y G E + R+R ++ R+L K PG S
Sbjct: 425 NVYTEAGNLEGILRVRMLMRKRKLKKDPGCS 455
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 6/222 (2%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M +G P+ + +CA LS GK+ H HV + + + T+LISMY KC
Sbjct: 1 MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
AR+ FD+ +N+++SGY N + V +F M++ V+ N + + ++
Sbjct: 61 IDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLV 120
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
CG G++ + + FGL C++ + +SG +D R+L E+P +
Sbjct: 121 QPCGIPGNLGLGMCVHGFC-VKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPRKGL 179
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVIL 358
+++++ + + L + +EME + P P ++
Sbjct: 180 ITWNAMING---YAQNGLANNVLELYKEMESKGFCPDPLTLV 218
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 218/383 (56%), Gaps = 10/383 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S + SV+ A L ++ GRQ+H T+ D + T+L+ MY CG + A
Sbjct: 119 RPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARK 178
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + G +++ WN M+AG + G + A ++F +E + + +W ++I+G++Q
Sbjct: 179 LF-DFVGFKDVALWNAMVAGYVKVGELKSARKVF----NEMPQRNVISWTTLIAGYAQTN 233
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF KMQ + P + +VLSACADL AL+LG+ H ++ + L + S+
Sbjct: 234 RPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYN 293
Query: 188 ALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY K G RR + FE +K W+ +I+ +G A+++F M++ K
Sbjct: 294 ALIDMYAKSGN---IRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAK 350
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +FVA+LSAC H G VD F M + ++PK EH+GCM+DLL R+G L EA
Sbjct: 351 VRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEA 410
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
++L+ ++P E ++ SLL A H +++L + L ++EP N +V+LSN YA L
Sbjct: 411 QKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAAL 470
Query: 366 GRWEDVGRIRQMINDRQLTKLPG 388
G+W + G +R+++ + + K PG
Sbjct: 471 GKWNESGTVRKLMRNAGVKKAPG 493
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 171/396 (43%), Gaps = 75/396 (18%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S+ F S++S C L+L Q+HG L D + + +D C L
Sbjct: 23 SSLQFTSLLSNCRHHLHLY---QIHGFMLHRALDQDNLFLSQFID---ACTSL------- 69
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
G S A +F H PD +N+ I S+
Sbjct: 70 ----------------------GLSSYAFSIFSNKTH----PDLRLYNTAIKALSKTSSP 103
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A L+ +++ G+ P + SVL A LSA+++G++ H + + L+ D ++AT+L
Sbjct: 104 INAIWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSL 163
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES--------------- 234
I MY CG S AR+ FD K D A WNAM++GY + GE +S
Sbjct: 164 IQMYSSCGFVSDARKLFDFVGFK--DVALWNAMVAGYVKVGELKSARKVFNEMPQRNVIS 221
Query: 235 ----------------AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
A+E+F MQ E+V+P+ + +AVLSAC G ++ I ++
Sbjct: 222 WTTLIAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIE 281
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
GL + ++D+ +SG + A E+ + + +V + +++ A H
Sbjct: 282 KH-GLCRIVSLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAI 340
Query: 339 EMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGR 373
+M +++++ + N FV + + + +G DVGR
Sbjct: 341 DMFLRMEKAKVRPNEVTFVAILSACSHVGM-VDVGR 375
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 210/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ AC+S L G ++H +K D+ +G AL+DMY KCG
Sbjct: 476 EPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCG------- 528
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ +E K + + TM+ +WN++I+GF+ L
Sbjct: 529 MIEEAKKIHDRIEQQTMV-----------------------------SWNAIIAGFTLLK 559
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A F +M + P VL ACA+L+++ LGK+ HG +I+ +L+ D + +
Sbjct: 560 HSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITS 619
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ K D WNAMI GY ++G E A+ F+ MQ E V
Sbjct: 620 TLVDMYSKCGNMQDSALVFEKAPNK--DFVTWNAMICGYAQHGLGEEALGYFERMQLENV 677
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN A+FV++L AC H G +DK L F M ++GL+P+ EH+ CM+D++GRSGR+ EA
Sbjct: 678 RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEAL 737
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+E+P E ++ +LL C H N ++ E+ + ++EPE+ + ++LSNIYA G
Sbjct: 738 KLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAG 797
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W V +R+M+ +L K PG S
Sbjct: 798 MWGKVSEMRKMMRYNKLKKEPGCS 821
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 11/318 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF +I C+ L+ G+Q H + D I L+ MYL+C L A+ VF+++
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+++++NTMI+G G A E F ++ K D +WNSM+SGF Q G ++
Sbjct: 105 -SQRDVISYNTMISGYADAGEMNLANEFF----YDTPKRDVVSWNSMLSGFLQNGECRKS 159
Query: 133 FKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+F M + V VL AC+ L LG + HG ++R KD +AL+
Sbjct: 160 IDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLD 219
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KC + + + F + +K + W+A+I+G +N E+ +E+F MQ+ + +
Sbjct: 220 MYAKCKRLDDSLKIFSEIPVK--NWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQ 277
Query: 252 ASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ + +V +C + Q+ + DFG +D+ + G L +A+ +
Sbjct: 278 SIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVG--TATLDMYAKCGSLADAQRIF 335
Query: 311 RELPEPTVSVYHSLLGAC 328
LP+ ++ Y++++ C
Sbjct: 336 NSLPKHSLQCYNAIIVGC 353
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 45/360 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV +CA L L+ G Q+H LK + SD +GTA +DMY KCG L A +F L
Sbjct: 280 YASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLP 339
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
++ +N +I G + N + +A++ F+ L G GF+++ +
Sbjct: 340 -KHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGL------------GFNEISL----- 381
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+ SACA + G++ H +++ L + +A +++ MY
Sbjct: 382 ------------------SGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMY 423
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KC S A FD+ E + D WNA+I+ + +NG E + +F M + +++P+ +
Sbjct: 424 GKCEALSEACCMFDEMERR--DAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFT 481
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+ +VL AC ++ ++I + GL G ++D+ + G ++EA+++ +
Sbjct: 482 YGSVLKACSSQQALNSGMEIHNRIIKS-GLGLDSFVGGALIDMYCKCGMIEEAKKIHDRI 540
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL---SNIYA-GLGR 367
+ T+ +++++ +S+ ++ +M +P+N T ++L +N+ + GLG+
Sbjct: 541 EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGK 600
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 171/421 (40%), Gaps = 75/421 (17%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF V+ AC+ L G QVHGL +++ D + G+AL+DMY KC L + +F
Sbjct: 175 DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIF 234
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +N + W+ +IAG + N +E
Sbjct: 235 SEIP-VKNWVCWSAIIAGCVQNDEHILGLE------------------------------ 263
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
LF++MQ G+ S SV +CA LSALK+G + H H ++ D D ++ TA
Sbjct: 264 -----LFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTAT 318
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG + A+R F+ + +NA+I G RN + A++ F L+ + +
Sbjct: 319 LDMYAKCGSLADAQRIFNS--LPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376
Query: 250 NSASFVAVLSACG-----------HAGHVDKALQ----IFTMMDDDFGLKPKQEHFGCMV 294
N S SAC H+ V L+ + + D +G CM
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMF 436
Query: 295 DLLGR---------------SGRLDEAREL----IRELPEPTVSVYHSLLGACWCHLNSD 335
D + R +G +E L +R EP Y S+L AC +
Sbjct: 437 DEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALN 496
Query: 336 LGEEMAMKLQEMEPENPTPFV--ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGI 393
G E+ ++ + FV L ++Y G E+ +I I + + I AG
Sbjct: 497 SGMEIHNRIIK-SGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGF 555
Query: 394 T 394
T
Sbjct: 556 T 556
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 14/250 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
+S +P++ T+ V+ ACA+L + G+Q+HG +K+E SD I + LVDMY KCG +
Sbjct: 574 MSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQD 633
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ VF++ +++ +TWN MI G +G E+A+ FE + E +P+ AT+ S++ +
Sbjct: 634 SALVFEKAP-NKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACA 692
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADL 179
+G + F M + G+ P ++ C+ ++ +S ALKL +E
Sbjct: 693 HMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEM-------PF 745
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D + L+S+ G A + + +++P+D + + + Y G + E+
Sbjct: 746 EADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKVSEM 805
Query: 239 FDLMQQEKVK 248
+M+ K+K
Sbjct: 806 RKMMRYNKLK 815
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/240 (19%), Positives = 108/240 (45%), Gaps = 31/240 (12%)
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+ T + ++ + ++ C+D ++LK GK+ H +I + D ++ L+ MY++C
Sbjct: 33 QQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCS 92
Query: 198 QPSWARRFFDQ-----------------------------FEIKPDDPAFWNAMISGYGR 228
++A + F++ ++ D WN+M+SG+ +
Sbjct: 93 HLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQ 152
Query: 229 NGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
NGE ++++F D+ + E+V + +F VL AC +Q+ ++ G
Sbjct: 153 NGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLI-VRMGFYKDV 211
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
++D+ + RLD++ ++ E+P + +++ C + LG E+ ++Q++
Sbjct: 212 VTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKV 271
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 210/401 (52%), Gaps = 55/401 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK------------IEKQSDTMIGTALVDM 55
EPNSVT IS++SACASL L G ++H +LK D M+ AL+DM
Sbjct: 392 EPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDM 451
Query: 56 YLKCGCLPCAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
Y KC A ++F + + RN++TW
Sbjct: 452 YSKCRSFKAARSIFDSIPRRERNVVTWTV------------------------------- 480
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHG 172
MI G++Q G +A K+F +M S + P+ ++ +L ACA L+AL++GK+ H
Sbjct: 481 ----MIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHA 536
Query: 173 HVIRADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
+V R + +A LI MY KCG AR FD + + W +M+SGYG +G
Sbjct: 537 YVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKR--NEVSWTSMMSGYGMHG 594
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A++IFD MQ+ P+ SF+ +L AC H+G VD+ L F +M D+ + EH+
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHY 654
Query: 291 GCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
C++DLL R GRLD+A + I+E+P EP+ ++ +LL AC H N +L E KL M+
Sbjct: 655 ACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKA 714
Query: 350 ENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
EN + ++SNIYA RW+DV RIRQ++ + K PG S
Sbjct: 715 ENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCS 755
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 16/325 (4%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ + ++ ++++ ACASL L +++H ++ +D + AL+D Y KCG + A
Sbjct: 254 NERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDA 313
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ +++++WN M+ G +G A ELFE + E D TW+++I+G++Q
Sbjct: 314 VKVFNVME-FKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQ 372
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL------ 179
G EA F++M G P+ + S+LSACA L AL G E H + ++ L
Sbjct: 373 RGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDND 432
Query: 180 ------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+D + ALI MY KC AR FD + + W MI GY + G+
Sbjct: 433 FGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSN 492
Query: 234 SAVEIFDLM--QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
A++IF M + V PN+ + +L AC H + QI + +P
Sbjct: 493 DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVA 552
Query: 292 -CMVDLLGRSGRLDEARELIRELPE 315
C++D+ + G +D AR + +P+
Sbjct: 553 NCLIDMYSKCGDVDTARNVFDSMPK 577
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 140/304 (46%), Gaps = 34/304 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T + AC L GR +HGL +S+ + ALV MY +CG L A
Sbjct: 146 KPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASL 205
Query: 68 VFQEL--KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF E+ KG ++++WN+++A + A+ELF + SMI
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEM-------------SMI----- 247
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ EK +T + + ++L ACA L AL KE H + IR D +
Sbjct: 248 ---------VHEK--ATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFV 296
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI Y KCG + A + F+ E K D WNAM++GY ++G + +A E+F+ M++E
Sbjct: 297 CNALIDTYAKCGSMNDAVKVFNVMEFK--DVVSWNAMVTGYTQSGNFGAAFELFENMRKE 354
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ + ++ AV++ G +AL F M D G +P ++ G L +
Sbjct: 355 NIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILD-GSEPNSVTIISLLSACASLGALSQ 413
Query: 306 AREL 309
E+
Sbjct: 414 GMEI 417
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 132/314 (42%), Gaps = 30/314 (9%)
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-NSMISGFSQLGMRFEAFKLFEKMQST 142
++A + G ++ A+ + E + P PA W N ++ + G A + +M
Sbjct: 89 VVASYLACGATKDALSVLERVT-----PSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRA 143
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
G P + L AC +L + G+ HG + + + AL++MY +CG A
Sbjct: 144 GTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDA 203
Query: 203 RRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQ---QEKV---KPNSASFV 255
FD+ K DD WN++++ + + +A+E+F M EK + + S V
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIV 263
Query: 256 AVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIR 311
+L AC + + +I + + + F + F C ++D + G +++A ++
Sbjct: 264 NILPACASLKALPQIKEIHSYAIRNGTFA-----DAFVCNALIDTYAKCGSMNDAVKVFN 318
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGR--- 367
+ V +++++ N E+ + M EN P + S + AG +
Sbjct: 319 VMEFKDVVSWNAMVTGYTQSGNFGAAFEL---FENMRKENIPLDVITWSAVIAGYAQRGC 375
Query: 368 -WEDVGRIRQMIND 380
E + +QMI D
Sbjct: 376 SQEALDAFQQMILD 389
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 199/384 (51%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T +S++ C + L+ G+ +H TL+ ++ TA +DMY KCG + A +V
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F K D W++MIS ++Q
Sbjct: 386 FDSFKSK------------------------------------DLMMWSAMISSYAQNNC 409
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF +F M G+ P+ + + S+L CA +L++GK H ++ + + D + T+
Sbjct: 410 IDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTS 469
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+ MY CG A R F E D + WNAMISG+ +G E+A+E+F+ M+ V
Sbjct: 470 FVDMYANCGDIDTAHRLFA--EATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ L AC H+G + + ++F M +FG PK EH+GCMVDLLGR+G LDEA E
Sbjct: 528 PNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHE 587
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ +P P ++V+ S L AC H N LGE A + +EP V++SNIYA R
Sbjct: 588 LIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANR 647
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W DV IR+ + D + K PG+S+
Sbjct: 648 WGDVAYIRRAMKDEGIVKEPGVSS 671
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 153/349 (43%), Gaps = 44/349 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCA 65
+P+ + IS+ A L L+ G+ +H ++ K +S + TAL+DMY+KC L A
Sbjct: 222 KPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYA 281
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF +GL+ K +W +MI+ +
Sbjct: 282 RRVF--------------------------------DGLS----KASIISWTAMIAAYIH 305
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E +LF KM GM P+ + S++ C AL+LGK H +R +
Sbjct: 306 CNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVL 365
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ATA I MY KCG AR FD F K D W+AMIS Y +N + A +IF M
Sbjct: 366 ATAFIDMYGKCGDVRSARSVFDSF--KSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGC 423
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++PN + V++L C AG ++ I + +D G+K VD+ G +D
Sbjct: 424 GIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQ-GIKGDMILKTSFVDMYANCGDIDT 482
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
A L E + +S++++++ H + + E+ +EME TP
Sbjct: 483 AHRLFAEATDRDISMWNAMISGFAMHGHGEAALEL---FEEMEALGVTP 528
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 45/324 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E ++ SV+ AC + G++VHG +K D + AL+ MY + G L A
Sbjct: 121 EVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARL 180
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +++ ++++++W+TM I + + G
Sbjct: 181 LFDKIE-NKDVVSWSTM-----------------------------------IRSYDRSG 204
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL--NKDESM 185
+ EA L M + PS + S+ A+L+ LKLGK H +V+R +
Sbjct: 205 LLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL 264
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY+KC ++ARR FD + W AMI+ Y V +F M E
Sbjct: 265 CTALIDMYVKCENLAYARRVFDG--LSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGE 322
Query: 246 KVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ PN + ++++ CG AG ++ K L FT+ + G +D+ G+ G +
Sbjct: 323 GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRN---GFTLSLVLATAFIDMYGKCGDV 379
Query: 304 DEARELIRELPEPTVSVYHSLLGA 327
AR + + ++ +++ +
Sbjct: 380 RSARSVFDSFKSKDLMMWSAMISS 403
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 6/232 (2%)
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
A E + + A + +I+ + + +A K++ M+ T + SVL AC + +
Sbjct: 81 ALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSF 140
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG+E HG V++ + D + ALI MY + G + AR FD+ E K D W+ MI
Sbjct: 141 LLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENK--DVVSWSTMIR 198
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFG 282
Y R+G + A+++ M +VKP+ +++ + KA+ + M + G
Sbjct: 199 SYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCG 258
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
K ++D+ + L AR + L + ++ + +++ A + H N+
Sbjct: 259 -KSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAA-YIHCNN 308
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 20/153 (13%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQ-----FGRQVH--GLTLKIEKQSDTMIGTALVDM 55
E L PN +TFI + AC+ LQ F + VH G T K+E +VD+
Sbjct: 522 EALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYG------CMVDL 575
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE--GFKPDP 113
+ G L AH + + + NI + + +A L+ K ++L E A + +P
Sbjct: 576 LGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH----KNIKLGEWAAKQFLSLEPHK 631
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEK-MQSTGMV 145
+ +N ++S R+ + M+ G+V
Sbjct: 632 SGYNVLMSNIYASANRWGDVAYIRRAMKDEGIV 664
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 223/421 (52%), Gaps = 53/421 (12%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
I+ C L+ GRQVH + + + T LV MY +CG L A NV + RN
Sbjct: 42 ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMP-ERN 100
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP-------------------------- 111
+++W MI+G N R ++A ELF + G
Sbjct: 101 VVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDM 160
Query: 112 --------------------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
D ++ +++SG++QLG+ EA LF + + GM +
Sbjct: 161 YAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTF 220
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
T++L+A + LS++ GK+ HG ++R +L ++ +LI MY KCG+ ++RR FD
Sbjct: 221 TALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSM-- 278
Query: 212 KPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
P+ WNAM+ GYGR+G V++F M E VKP+S + +AVLS H G VD+
Sbjct: 279 -PERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLSGYSHGGLVDEG 336
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACW 329
L +F + + EH+GC++DLLGRSG+L +A LI ++P +PT +++ SLLGAC
Sbjct: 337 LDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGACR 396
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
H N +GE +A KL ++EPEN +VILSNIYA G W+DV R+R+++ + + K PG
Sbjct: 397 VHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEPGR 456
Query: 390 S 390
S
Sbjct: 457 S 457
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N VTF ++++A + L + +G+QVHGL L+ E + +L+DMY KCG L + VF
Sbjct: 216 NQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVF 275
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ R++++WN M+ G +G + + ++LF + E KPD T +++SG+S G+
Sbjct: 276 DSMP-ERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCDE-VKPDSVTLLAVLSGYSHGGLV 333
Query: 130 FEAFKLFE---KMQSTGM-VPSLKCVTSVLSACADL 161
E +F+ K QST + CV +L L
Sbjct: 334 DEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQL 369
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 228/417 (54%), Gaps = 38/417 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT +++SA A + G++V ++ +SD + + ++DMY KCG + A VF
Sbjct: 349 DCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVF 408
Query: 70 QE--------------------LKGSR--------------NILTWNTMIAGMMLNGRSE 95
L G N +TWN +I + NG+ +
Sbjct: 409 DSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNGQVD 468
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A E+F + G P +W +M++G Q G EA KMQ +G+ P++ +T L
Sbjct: 469 EAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVAL 528
Query: 156 SACADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPD 214
SACA+L++L LG+ HG++IR L+ S+ TALI MY KCG S A + F + + +
Sbjct: 529 SACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKR-KSYSE 587
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
P F NAMIS Y +G + A++++ ++ +KP++ +F VLSAC HAG +++A++IF
Sbjct: 588 LPLF-NAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIF 646
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+ M G++P EH+G MVDLL +G ++A L+ E+P +P + SLL C
Sbjct: 647 SDMVSKHGMEPCLEHYGLMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTCNEEHK 706
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L + ++ +L E EP+N +V +SN YAG G W++V ++R+M+ D+ L K PG S
Sbjct: 707 TELVDYLSRQLLESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPGCS 763
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 165/367 (44%), Gaps = 55/367 (14%)
Query: 3 ECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD-TMIGTALVDMYLKC 59
E L DE P++ +V AC +L + FGR +HG K D + ++L DMY KC
Sbjct: 137 EMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKC 196
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G L A VF E+ RN++ WN ++
Sbjct: 197 GVLDDARKVFDEIP-ERNVVAWN-----------------------------------AL 220
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
+ G+ Q GM EA +L M+ G+ P+ V++ LSA A++ + GK++H + L
Sbjct: 221 MVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGL 280
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + T++++ Y K G +A FD+ K D WN +ISGY + G E A+ +
Sbjct: 281 EMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGK--DVVTWNLLISGYVQQGLVEDAIRMC 338
Query: 240 DLMQQEKVKPNSASFVAVLSACGHA--GHVDKALQIFTM---MDDDFGLKPKQEHFGCMV 294
LM+ EK+K + + ++SA + K +Q + + + D GL ++
Sbjct: 339 KLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLAST------VI 392
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D+ + G + +A+ + + + ++++LL A + S L E EM+ E+ P
Sbjct: 393 DMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAA---YAESGLSGEALRLFYEMQLESVPP 449
Query: 355 FVILSNI 361
I N+
Sbjct: 450 NAITWNL 456
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 177/393 (45%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ + G+Q H + + + D ++GT++++ Y K G + A
Sbjct: 246 EPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEM 305
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G D TWN +ISG+ Q G
Sbjct: 306 VFDRMIGK------------------------------------DVVTWNLLISGYVQQG 329
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A ++ + M+ + +++++SA A KLGKE + IR D +A+
Sbjct: 330 LVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHSFESDIGLAS 389
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+I MY KCG A+R FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 390 TVIDMYAKCGSIVDAKRVFDSTVQK--DLILWNTLLAAYAESGLSGEALRLFYEMQLESV 447
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ ++ ++ + G VD+A ++F M G+ P + M++ L ++G +EA
Sbjct: 448 PPNAITWNLIILSLFRNGQVDEAKEMFLQMQSS-GIVPTLVSWTTMMNGLVQNGCSEEAV 506
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEMEPENPTPFVILSNI 361
+R++ E P V L AC + LG + + ++ + + L ++
Sbjct: 507 HYLRKMQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDM 566
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G D+ + ++ + ++LP +A I+
Sbjct: 567 YAKCG---DISKAEKVFKRKSYSELPLFNAMIS 596
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 119/289 (41%), Gaps = 46/289 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C GRQ+H LK + + I T LV Y KC A +F +L+
Sbjct: 50 ILQGCVYERDFHTGRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLR- 108
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W +I G K ++G+ A
Sbjct: 109 VRNVFSWAAII----------------------GVK-------------CRVGLAEGALM 133
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD-ESMATALISMY 193
F +M + P V +V AC L G+ HG+V ++ L D +A++L MY
Sbjct: 134 GFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMY 193
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR+ FD EI + WNA++ GY +NG E A+ + M++E V+P +
Sbjct: 194 GKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVT 251
Query: 254 FVAVLSA----CGHA-GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LSA CG G A+ + ++ D L +F C V L+
Sbjct: 252 VSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLI 300
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 21/244 (8%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD- 178
+S + G EA L +M + + +L C G++ H +++
Sbjct: 16 VSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGE 75
Query: 179 -LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
K+E + T L+ Y KC A F + ++ + W A+I R G E A+
Sbjct: 76 FYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVR--NVFSWAAIIGVKCRVGLAEGALM 133
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------ 291
F M ++++ P++ V ACG ALQ G K +G
Sbjct: 134 GFVEMLKDEIFPDNFVVPNVCKACG-------ALQWSGFGRGIHGYVAKSGLYGDCVFVA 186
Query: 292 -CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+ D+ G+ G LD+AR++ E+PE V +++L+ ++ + + EE + +M E
Sbjct: 187 SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVG---YVQNGMNEEAIRLMCDMREE 243
Query: 351 NPTP 354
P
Sbjct: 244 GVEP 247
>gi|296082436|emb|CBI21441.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 212/383 (55%), Gaps = 14/383 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ F V AC LL+L+ G QVH + + D + +L+DMY K G + V
Sbjct: 461 PDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRV 520
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R++L+WN+MI+G R + A+ +FE + + D TWN+MI GF L M
Sbjct: 521 FDEMV-ERDVLSWNSMISGYC--KRIQDALNVFELMD----RFDVVTWNAMILGFVDLEM 573
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A + F KMQ +G++ + +++VL AC LK GK+ H ++ + + + A
Sbjct: 574 GHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYITKNSFSSVIPVWNA 629
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F + D WN MI G+G +G + A+++ M V
Sbjct: 630 LIHMYSKCGCIGTAYSIFSNMISR--DLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVC 687
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS +F + LSAC H+G VD+ +++F M DFG P EHF C+VDLL R+ RL++A
Sbjct: 688 PNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVG 747
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P +P+ ++ +LL AC N + + A +L ++EPE+ +V LSNIYA GR
Sbjct: 748 FIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGR 807
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+D +R+++ DR L K G S
Sbjct: 808 WDDAVAVRKLMEDRGLVKPSGYS 830
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 12/185 (6%)
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++ A LF+ L+ +P+ W +++ +S+ G+ E + + +M+ G++P
Sbjct: 412 KNSSAQALFDKLS----QPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFP 467
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
V AC L L++G + H V+ D + +LI MY K G RR FD E+
Sbjct: 468 KVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFD--EMV 525
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN+MISGY + + A+ +F+LM + V +A + + GH+ AL+
Sbjct: 526 ERDVLSWNSMISGYCK--RIQDALNVFELMDRFDVVTWNAMILGFVDL--EMGHL--ALE 579
Query: 273 IFTMM 277
F+ M
Sbjct: 580 CFSKM 584
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 209/384 (54%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF +V+ + A L + G+ +H +++ +S+ + TALV+MY C + A V
Sbjct: 140 PDSSTFPTVLKSVAQLCRQELGKAIHCCIIQMGFESNVYVSTALVNMYGTCSSVSDARQV 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RNI++WN ++I+G++ M
Sbjct: 200 FDEIP-DRNIVSWN-----------------------------------ALITGYNHNRM 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +F +MQ G P + VL ACA L AL G+ ++ L + + TA
Sbjct: 224 FRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A + F +K + WN +ISGY NG ESA++ F M EK K
Sbjct: 284 LIDMYAKCGVVDEAEKIFKAMRVK--NVYTWNVLISGYAMNGRGESALQAFSRMIMEKFK 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL AC H G V++ FT M ++FGL+P+ EH+GCMVDLLGR+G LDEA++
Sbjct: 342 PDEVTFLGVLCACCHQGLVNEGRTYFTSMKEEFGLRPRIEHYGCMVDLLGRAGFLDEAQQ 401
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ + +P ++ LLGAC H N LGE KL E+EP N +V+L+N+YA R
Sbjct: 402 LIQAMSMQPDPIIWRELLGACRIHGNIQLGEFAIKKLLELEPNNGENYVLLANLYARDQR 461
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ VG +R+M++ R++ K+PG S+
Sbjct: 462 WDKVGEVREMMDCRRVRKVPGCSS 485
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D NSMI ++ + ++ +M G+ P +VL + A L +LGK H
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIH 165
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+I+ + ++TAL++MY C S AR+ FD EI + WNA+I+GY N
Sbjct: 166 CCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFD--EIPDRNIVSWNALITGYNHNRM 223
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ +++F MQ KP + V VL AC H G +++ I +D + L+
Sbjct: 224 FRKVIDVFREMQIAGAKPVEVTMVGVLLACAHLGALNQGRWIDDYIDHN-RLRLNVFVGT 282
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ + G +DEA ++ + + V ++ L+
Sbjct: 283 ALIDMYAKCGVVDEAEKIFKAMRVKNVYTWNVLI 316
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT + V+ ACA L L GR + + + +GTAL+DMY KCG + A
Sbjct: 240 KPVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEK 299
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ ++ +N+ TWN +I+G +NGR E A++ F + E FKPD T+ ++ G
Sbjct: 300 IFKAMR-VKNVYTWNVLISGYAMNGRGESALQAFSRMIMEKFKPDEVTFLGVLCACCHQG 358
Query: 128 MRFEAFKLFEKMQST-GMVPSLK 149
+ E F M+ G+ P ++
Sbjct: 359 LVNEGRTYFTSMKEEFGLRPRIE 381
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T VI AC + L GR +H + LK D + ALVDMY KC +
Sbjct: 1178 QPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYGLHLDHFVCAALVDMYAKCKVI----- 1232
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LF+ + + D TW MI G+++ G
Sbjct: 1233 ---------------------------EDAKLLFDVMPSK----DLVTWTVMIGGYAECG 1261
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ LF+ ++ G VP + S+++ACA L A+ + H +V R + D + T
Sbjct: 1262 NAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGT 1321
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG AR FD K + W+AMI+ YG +G+ + A+E+F +M +
Sbjct: 1322 AMIDMYAKCGDVDSAREIFDNMHHK--NVISWSAMIAAYGYHGQGKKALELFPMMLSSGI 1379
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +FV++L AC HAG V+ L + ++M + FG++P +H CMVDLLGR+G+L EA
Sbjct: 1380 LPNNITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAF 1439
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I + E ++ SLLGAC H DL E+ A L E++P+NP +++LSNIYA G
Sbjct: 1440 RFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANAG 1499
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+DV +IR ++ R+L K+PG +
Sbjct: 1500 QWKDVAKIRDLMTKRKLKKIPGYT 1523
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 9/283 (3%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGR-SEKAMELFEGLAHEGFK 110
L+ L C + C L + ++L N +A +L K + L E +
Sbjct: 1085 LISTLLNCKNI-CQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQ 1143
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
+P +W+ MI GF ++G + +K F+++ G+ P + V+ AC D AL +G+
Sbjct: 1144 KNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLI 1203
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H V++ L+ D + AL+ MY KC A+ FD K D W MI GY G
Sbjct: 1204 HCVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSK--DLVTWTVMIGGYAECG 1261
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEH 289
+ ++ +FD +++E P+ + V++++AC G ++KA + ++ + F L
Sbjct: 1262 NAKESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVI--- 1318
Query: 290 FG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
G M+D+ + G +D ARE+ + V + +++ A H
Sbjct: 1319 LGTAMIDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYH 1361
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 15/182 (8%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVI-RADLNKDESMATALISMYM--KCGQPSWARRFF 206
C+ S L C ++ +K + H + + L + ++A L+ +Y+ KC ++A F
Sbjct: 1084 CLISTLLNCKNICQIK---QLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYA--LF 1138
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D E+ +P W+ MI G+ + GE+ + F + + V+P++ + V+ AC
Sbjct: 1139 D--EMPQKNPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVA 1196
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
+D I ++ +GL +HF C +VD+ + +++A+ L +P + + +
Sbjct: 1197 LDMGRLIHCVV-LKYGLHL--DHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVM 1253
Query: 325 LG 326
+G
Sbjct: 1254 IG 1255
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 201/361 (55%), Gaps = 7/361 (1%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
Q+H L ++ +D +LV Y CG + A VF E ++++WN MI G + +
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G +A ELF+ + +W +I ++Q+ EA ++F +MQ G+ P +
Sbjct: 152 GDLARARELFDVMPGRNV----VSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVAL 207
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVLSAC DL + LG+ H V+R L ++ + A+I MY+KCG A F+ E
Sbjct: 208 LSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQ 267
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
K W MI+G+ +G AVE+F M++E V PN +F+AVLS C H G D
Sbjct: 268 K--SIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGR 325
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWC 330
F M + +KP+ EH+GCM+DLLGR+G L EAR LI+++P + +++ +LL A
Sbjct: 326 WYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAART 385
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
H +++LGE+ + L E+EP N +++LSNIYA RW+ V +R + DR L +PG S
Sbjct: 386 HGDTELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGAS 445
Query: 391 A 391
+
Sbjct: 446 S 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V +SV+SAC L + G VH L+ + + A++DMY+KCG + A
Sbjct: 201 EPDGVALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALE 260
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++I+TW TMIAG L+G +A+ELF + E P+ T+ +++S S +G
Sbjct: 261 VFEGME-QKSIVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVG 319
Query: 128 MRFEAFKLFEKMQS 141
+ F+ M S
Sbjct: 320 LTDLGRWYFKTMVS 333
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTL---KIEKQSDTMIGTALVDMYLKCGCLPCA 65
PN +TF++V+S C+ + GR + KI+ + + ++D+ + GCL A
Sbjct: 303 PNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY--GCMIDLLGRAGCLMEA 360
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSE 95
+ Q++ N W ++A +G +E
Sbjct: 361 RGLIQDMPFKANAAIWGALLAAARTHGDTE 390
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/389 (36%), Positives = 214/389 (55%), Gaps = 21/389 (5%)
Query: 8 EPNSVTFISVISACAS----LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
EP+ T+++VISAC+S L R +H + + Q + + TAL+DMY KCG +
Sbjct: 257 EPDETTWVTVISACSSRGDPCLAASLVRTLH----QKQIQLNCFVRTALLDMYAKCGSIG 312
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F EL RN +TWN MI+ G + A ELF + + TWNSMI+G+
Sbjct: 313 AARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGR----NVVTWNSMIAGY 368
Query: 124 SQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+Q G A +LF++M + + P + SV+SAC L AL+LG + +
Sbjct: 369 AQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLS 428
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S A+I MY +CG A+R F E+ D +N +ISG+ +G A+ + M
Sbjct: 429 ISGHNAMIFMYSRCGSMEDAKRVFQ--EMATRDVVSYNTLISGFAAHGHGVEAINLMSTM 486
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++ ++P+ +F+ VL+AC HAG +++ ++F + D P +H+ CMVDLLGR G
Sbjct: 487 KEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGE 541
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L++A+ + +P EP VY SLL A H +LGE A KL E+EP+N F++LSNI
Sbjct: 542 LEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNI 601
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA GRW+DV RIR+ + + K G S
Sbjct: 602 YASAGRWKDVERIREAMKKGGVKKTTGWS 630
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 79/406 (19%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG--------------- 74
G H LK+ SD + A++DMY + G + A VF E+
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 75 -----------------SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
RN++TW M+ G E A F+ + +WN
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSV----VSWN 229
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS----ALKLGKETHGH 173
+M+SG++Q G+ E +LF++M + G+ P +V+SAC+ A L + H
Sbjct: 230 AMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQ------------------------- 208
I+ + + TAL+ MY KCG ARR FD+
Sbjct: 290 QIQLNC----FVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDS 345
Query: 209 ----FEIKP-DDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACG 262
F P + WN+MI+GY +NG+ A+E+F +++ +K+ P+ + V+V+SACG
Sbjct: 346 ARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACG 405
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
H G ++ + + ++ +K M+ + R G +++A+ + +E+ V Y+
Sbjct: 406 HLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYN 464
Query: 323 SLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAGL 365
+L+ H + + ++E +EP+ T +L+ +AGL
Sbjct: 465 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 510
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L + P+ + SM+ +S L + +FE MQ G+ P ++ SA
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIK-----SA 110
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
G H HV++ D + A+I MY + G AR+ FD+ A WNAM+
Sbjct: 111 GNGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY + A +FD+M + N ++ A+++ ++ A + F M + +
Sbjct: 171 SGYWKWESEGQAQWLFDVMPER----NVITWTAMVTGYAKVKDLEAARRYFDCMPERSVV 226
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEE 339
+ M+ ++G +E L E+ EP + + +++ AC + L
Sbjct: 227 S-----WNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAAS 281
Query: 340 MAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMIND 380
+ L + + + N L ++YA G +G R++ ++
Sbjct: 282 LVRTLHQKQIQLNCFVRTALLDMYAKCG---SIGAARRIFDE 320
>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 224/413 (54%), Gaps = 36/413 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F ++ A A+L ++ G Q+H L + +GT L+ MY +CG + A V
Sbjct: 104 PDSFSFAFIVKAAANLRSVRVGIQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKV 163
Query: 69 FQEL---------------------KGSR---------NILTWNTMIAGMMLNGRSEKAM 98
F E+ KG R N+++WN M+AG G E A
Sbjct: 164 FDEMPEPNAIAWNAMVTACCRGGDMKGGRELFDLMPVRNLMSWNVMLAGYTKAGELELAR 223
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
E+F + + D +W++MI GF+ G EAF F ++Q GM P+ +T VLSAC
Sbjct: 224 EMFLEMPMK----DDVSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSAC 279
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
A AL+ GK HG + ++ L S+ AL+ Y KCG A+ F++ + +
Sbjct: 280 AQAGALEFGKILHGFIEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERI-MNERNIVS 338
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W +M++ +G E A+ IF M++ ++P+ +F+++L AC HAG V++ + F M
Sbjct: 339 WTSMMAALAMHGHGEEAIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMK 398
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP-TVSVYHSLLGACWCHLNSDLG 337
+ ++P EH+GCMVDL GR+G+L +A E + ++P P T ++ +LLGAC H + L
Sbjct: 399 GMYNIEPSIEHYGCMVDLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLA 458
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E++ +L E++P N + V+LSN YA G+W+D +R+ + ++++TK PG S
Sbjct: 459 EQVKERLSELDPNNSSDHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWS 511
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 20/225 (8%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK-CVTSVLSACADLSALKLGKE 169
PD N++I G + ++ F +M+ P ++ A A+L ++++G +
Sbjct: 68 PDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVGIQ 127
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H + L+ + T LISMY +CG +AR+ FD E+ + WNAM++ R
Sbjct: 128 LHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFD--EMPEPNAIAWNAMVTACCRG 185
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM--MDDDFGLKPKQ 287
G+ + E+FDLM N S+ +L+ AG ++ A ++F M DD
Sbjct: 186 GDMKGGRELFDLMPVR----NLMSWNVMLAGYTKAGELELAREMFLEMPMKDDVS----- 236
Query: 288 EHFGCMVDLLGRSGRLDEA----RELIRELPEPTVSVYHSLLGAC 328
+ M+ +G +EA REL R+ P + +L AC
Sbjct: 237 --WSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSAC 279
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/407 (36%), Positives = 223/407 (54%), Gaps = 28/407 (6%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
CL P +TF+SV+S+C+S + QVH +K+ ++ T + A + MY CG L
Sbjct: 288 CL--RPTELTFVSVMSSCSSA---RVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLH 342
Query: 64 CAHNVFQELKGSRN--ILTWNTM-----------IAGMMLNGRSEKAMELFEGL-AHEGF 109
H VF L IL + M I ++ + S + +++F+ L + G
Sbjct: 343 AVHMVFDRLGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGL 402
Query: 110 KPDPATWNSMISGFSQLGMRFEAFK----LFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
N+++S FS+ G +A++ +E + ST + P+ ++ VLS CA +SAL+
Sbjct: 403 NSKIEVSNALVSAFSKHGQIEQAYQGLEQFYELLMST-LKPNAYTLSIVLSICASISALR 461
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
GK+ HG+++R+ + S+ ALI+MY KCG W+ R F+ + D WNAMIS
Sbjct: 462 HGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNV--MNGRDIVSWNAMISA 519
Query: 226 YGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
Y ++G+ + AV F MQ VKP+ A+F AVLSAC HAG VD +IF M +D+G +
Sbjct: 520 YAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFE 579
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV-SVYHSLLGACWCHLNSDLGEEMAMK 343
P +H C+VDLLGR+G L+EA LI V S++ +L AC H N LG +A
Sbjct: 580 PGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGF 639
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E+E +P +V+LSNIYA G+WE+ R ++ ++ K PG S
Sbjct: 640 LLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCS 686
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T S ++ACA+L Y G Q+H +++ ++ T +G L+ Y K L
Sbjct: 56 KPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQR 115
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E++ ++ +W T+++ G+ A LF ++ + P WN++I+G ++
Sbjct: 116 VFNEIENP-DVYSWTTLLSACTKLGQIGYACHLF----NQTPRMIPVVWNAIITGCAENK 170
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A LF +M G+ SVLS C+ L L G+E H VI+ S+
Sbjct: 171 HTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVIN 229
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++MY G+ + A F++ E D +N MI G G E A+ +F MQ+ +
Sbjct: 230 ALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACL 289
Query: 248 KPNSASFVAVLSACGHA 264
+P +FV+V+S+C A
Sbjct: 290 RPTELTFVSVMSSCSSA 306
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 35/233 (15%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVI 175
N +++ ++ + +LF ++ S+ + P ++S L+ACA+L G + H + I
Sbjct: 27 NQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQLHAYSI 86
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD--------------------- 214
+ L + L+S Y K +R F++ E PD
Sbjct: 87 QTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIE-NPDVYSWTTLLSACTKLGQIGYAC 145
Query: 215 ---------DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
P WNA+I+G N E A+ +F M Q V+ + +F +VLS C
Sbjct: 146 HLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LE 204
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
+D ++ T++ G + ++ + SG++ +A E+ E E TV
Sbjct: 205 LLDFGREVHTLVIKT-GFLVRASVINALLTMYFNSGKVADAYEVFEE-AESTV 255
>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Brachypodium distachyon]
Length = 614
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 216/385 (56%), Gaps = 42/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N T +V+++C +Q QVH L +K +S +G++L+DMY K G + A
Sbjct: 139 KANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARK 198
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D + ++ISG++QLG
Sbjct: 199 VFDMLP------------------------------------ERDTVSCTAIISGYAQLG 222
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF ++ S+GM + T++L++ + L++L GK+ HG ++R +L +
Sbjct: 223 LDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQN 282
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG+ ++RR FD P A WNAM+ GYGR+G + V++F M +E
Sbjct: 283 SLIDMYSKCGKLLYSRRVFDNM---PQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEE- 338
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP+S + +AVLS C H G VD+ L IF ++ + H+GC++DLLGRSG+L +A
Sbjct: 339 VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKA 398
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI +P EPT +++ SLLGAC H+N +GE +A KL +MEP N +VILSNIYA
Sbjct: 399 LDLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAA 458
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W+DV R+R+++ + +TK P S
Sbjct: 459 GMWKDVFRVRKLMLENTVTKEPAKS 483
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 11/167 (6%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+ ++AC + AL G++ H H+++A +AT LI +Y++CG AR D +
Sbjct: 46 AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+ W AMISGY ++G + A+E+F M + K N + VL++C + + Q
Sbjct: 106 --NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163
Query: 273 IFTM-MDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPE 315
+ ++ + +F + H ++D+ G+SG + EAR++ LPE
Sbjct: 164 VHSLVVKTNF-----ESHMFVGSSLLDMYGKSGNIQEARKVFDMLPE 205
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 215/384 (55%), Gaps = 13/384 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T++ IS+C+S+ + + + ++ + TAL+DM+ K G L A N+
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F EL RN +TWN MI+ G+ A ELF+ + K D +WNSMI+G++Q G
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP----KRDVVSWNSMIAGYAQNGE 371
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +LF++M S + P + SVLSAC + ALKL V ++ S
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFN 431
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG + A R F + D +N +ISG+ NG + A+++ M++E +
Sbjct: 432 SLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +++ VL+AC HAG +++ +F + P +H+ CMVDLLGR+G LDEA+
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAK 544
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P +P VY SLL A H LGE A KL E+EP+N +V+LSNIYA G
Sbjct: 545 MLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R+M+ L K G+S
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMS 628
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 63/397 (15%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G H LK+ D I A++DMY K G + A N+F+++ R + WN+MI+G
Sbjct: 114 GNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQM-AERTLADWNSMISGCW 172
Query: 90 LNGRSEKAMELFE---------------GLAHEG--------FKPDP----ATWNSMISG 122
+G +A+ LF G A G F P +WN+M S
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++Q EA LF +M G+ P +S+C+ + L + + + +
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-----------------------------FEIKP 213
+ TAL+ M+ K G AR FD+ F+ P
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 214 D-DPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
D WN+MI+GY +NGE ++E+F +++ ++P+ + +VLSACGH G + +
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--ACW 329
+ ++ + +K F ++ + + G + +A + + + V +++L+ A
Sbjct: 413 WVLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNI-YAGL 365
H + + M+ + +EP++ T +L+ +AGL
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGL 508
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG----TALVDMY 56
M C+ +P+ VT SV+SAC + L+ V L I ++ + +G +L+ MY
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWV----LDIVREKNIKLGISGFNSLIFMY 437
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
KCG + AH +FQ + G+R+++++NT+I+G NG ++A++L + EG +PD T+
Sbjct: 438 SKCGSVADAHRIFQTM-GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET-----H 171
+++ S G+ E +F+ +Q+ V C+ +L +L K+ ++ H
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQAP-TVDHYACMVDLLGRAGELDEAKMLIQSMPMKPH 555
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
V + LN I + G+ + ++ FE++P + + + + Y G
Sbjct: 556 AGVYGSLLNASR------IHKRVGLGELAASK----LFELEPQNLGNYVLLSNIYASFGR 605
Query: 232 YESAVEIFDLMQQEKVKPN 250
+E + ++M++ +K +
Sbjct: 606 WEDVKRVREMMKKGGLKKS 624
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 122/343 (35%), Gaps = 99/343 (28%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD + ++ M+ +S++G + LF+ S + P ++ A K G
Sbjct: 63 PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL-----AGKSGNLF 117
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ---------------------- 208
H +V++ D + A++ MY K GQ AR F+Q
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 209 ------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD--------------------- 240
F + P + W +M++GY + G+ ESA FD
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 241 ----------LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD------------ 278
M +E + P+ ++V +S+C G A I M+D
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 279 -------------------DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
D+ G + + M+ R G+L AREL +P+ V
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKL---QEMEPENPTPFVILS 359
++S++ + S + E+ ++ +++P+ T +LS
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLS 400
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 222/382 (58%), Gaps = 7/382 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F +++ C + L+ +Q HG L S+ +I ++++D Y KC + A +F
Sbjct: 182 NEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLF 241
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ R++L W TM++G G E A ELF+ + + +P W S+I+G+++ +
Sbjct: 242 DEMI-IRDVLAWTTMVSGYAQWGDVEAARELFDLMPEK----NPVAWTSLIAGYARHDLG 296
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LF KM + + P +S L A A +++L GK+ HG++IR ++ + + ++L
Sbjct: 297 HKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSL 356
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG R FD K D WN +IS ++G + A+++FD M + +KP
Sbjct: 357 IDMYSKCGCLEVGRLVFDLMGDKWD-VVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKP 415
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + + +L+AC H+G V + L+++ + G+ P QEH+ C++DLLGR+G D
Sbjct: 416 DRITLIVLLNACSHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQ 475
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++P +P ++++LLG C H N + G E+A K+ E++P++ +V+LS+I+A +GRW
Sbjct: 476 LEKMPCKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRW 535
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E V +RQ++N+R + K IS
Sbjct: 536 ELVENVRQLMNERHVRKDRAIS 557
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 167/321 (52%), Gaps = 19/321 (5%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHNV 68
S T ++ CA+ L+ G+ VH L LK+ K+ +T + L++MY KCG P A+ V
Sbjct: 50 SKTLAYLLQQCANTKSLKLGKWVH-LHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKV 108
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +RN+ +WN M++G G+ + A +LF+ + + D +WN+M+ +++ G
Sbjct: 109 FDEM-STRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEK----DVVSWNTMVIAYAKSGF 163
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A + + +++ G+ + +L+ C + L+L K+ HG V+ A + ++++
Sbjct: 164 CNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSS 223
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ Y KC + ARR FD+ I+ D W M+SGY + G+ E+A E+FDLM ++
Sbjct: 224 VLDAYAKCSEMGDARRLFDEMIIR--DVLAWTTMVSGYAQWGDVEAARELFDLMPEK--- 278
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N ++ ++++ KAL++FT M ++P Q F + L+ ++
Sbjct: 279 -NPVAWTSLIAGYARHDLGHKALELFTKM-MALNIRPDQFTFSSCLCASASIASLNHGKQ 336
Query: 309 ----LIRELPEPTVSVYHSLL 325
LIR P V SL+
Sbjct: 337 IHGYLIRTNIRPNTIVVSSLI 357
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 129/255 (50%), Gaps = 15/255 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ P+ TF S + A AS+ L G+Q+HG ++ + +T++ ++L+DMY KCGCL
Sbjct: 309 LNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEV 368
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
VF + +++ WNT+I+ + +GR ++A+++F+ + G KPD T +++ S
Sbjct: 369 GRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACS 428
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-- 181
G+ E +L+E + S G++P+ + ++ DL LG+ H + L K
Sbjct: 429 HSGLVQEGLRLYESITSCHGVIPNQEHYACLI----DL----LGRAGHFDTLMNQLEKMP 480
Query: 182 ---DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVE 237
++ + AL+ + G + R ++ E+ P A + + S + G +E
Sbjct: 481 CKPNDEIWNALLGVCRMHGNIEFGREVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVEN 540
Query: 238 IFDLMQQEKVKPNSA 252
+ LM + V+ + A
Sbjct: 541 VRQLMNERHVRKDRA 555
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K P S++ SQ G F+A + G+ K + +L CA+ +LKLGK
Sbjct: 13 KRVPCIVKSLLHLSSQ-GQLFQAISSLGLLSRNGIRLPSKTLAYLLQQCANTKSLKLGKW 71
Query: 170 THGHVIRADLNKDES-MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
H H+ L + + +A LI+MY KCG A + FD E+ + WN M+SGY +
Sbjct: 72 VHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFD--EMSTRNLYSWNGMLSGYAK 129
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G+ + A ++FD M ++ V S+ ++ A +G + AL+ + + G+ +
Sbjct: 130 LGKIKPARKLFDKMPEKDV----VSWNTMVIAYAKSGFCNDALRFYREL-RRLGIGYNEY 184
Query: 289 HFGCMVDLLGRSGRLDEARE 308
F ++++ + L+ +++
Sbjct: 185 SFAGLLNICVKVKELELSKQ 204
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 200/386 (51%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN ++ +SV+ AC L L+ G V ++ + + +G+AL+ MY KCG L A
Sbjct: 225 QPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARR 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +K K D TWN+MI+G++Q G
Sbjct: 285 IFDSMK------------------------------------KKDKVTWNAMITGYAQNG 308
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA KLF+ M+ + P + +LSACA + AL LGK+ + D + T
Sbjct: 309 MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGT 368
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-- 245
AL+ MY KCG A R F + + + WNAMIS +G+ + A+ +F M E
Sbjct: 369 ALVDMYAKCGSLDNAFRVF--YGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGG 426
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN +FV VLSAC HAG VD+ ++F MM FGL PK EH+ CMVDL R+G L+E
Sbjct: 427 TVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE 486
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + + +PE P + +LLGAC N D+ E + L E+EP N +VI S +YA
Sbjct: 487 AWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYAN 546
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L RW+D R+R ++ + ++K PG S
Sbjct: 547 LRRWDDSARMRMLMKQKGVSKTPGCS 572
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 151/324 (46%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN++T+ + AC++LL ++ GR H ++ D + +L+ MY +CG + A
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ + D +WNSMISG+S++
Sbjct: 184 VFDEIS------------------------------------QKDLVSWNSMISGYSKMR 207
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G P+ + SVL AC +L LKLG V+ + + M +
Sbjct: 208 HAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ARR FD +K D WNAMI+GY +NG E A+++F M+
Sbjct: 268 ALIHMYGKCGDLVSARRIFD--SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + + +LSAC G +D Q+ + + G + +VD+ + G LD A
Sbjct: 326 APDQITLIGILSACASIGALDLGKQV-EIYASERGFQDDVYVGTALVDMYAKCGSLDNAF 384
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ +P+ +++++ A H
Sbjct: 385 RVFYGMPKKNEVSWNAMISALAFH 408
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 111 PDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P ++N MI G S + A + + +M+ G+ P+ + AC++L A++ G+
Sbjct: 89 PTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRM 148
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H VIR L++D ++ +LI+MY +CG+ AR+ FD EI D WN+MISGY +
Sbjct: 149 GHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFD--EISQKDLVSWNSMISGYSKM 206
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ-- 287
AV +F M + +PN S V+VL ACG G + + ++F ++ K
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV-----EEFVVENKMTL 261
Query: 288 EHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
+F ++ + G+ G L AR + + + +++++ + + + EE Q
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG---YAQNGMSEEAIKLFQ 318
Query: 346 EMEPENPTP 354
+M + P
Sbjct: 319 DMRMSSTAP 327
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 26/293 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +T I ++SACAS+ L G+QV + Q D +GTALVDMY KCG L A
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNA 383
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISGF 123
VF + +N ++WN MI+ + +G++++A+ LF+ + +EG P+ T+ ++S
Sbjct: 384 FRVFYGMP-KKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 124 SQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADL 179
G+ E +LF M S+ G+VP ++ C+ + S L +E V+
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL------EEAWDFVMTMPE 496
Query: 180 NKDESMATALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISG--YGRNGEYESAV 236
DE + AL+ K + R E++P + N +IS Y ++ +
Sbjct: 497 KPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG--NYVISSKLYANLRRWDDSA 554
Query: 237 EIFDLMQQEKV-KPNSASFVAVLSACG--HAGHV-----DKALQIFTMMDDDF 281
+ LM+Q+ V K S++ + S HAG V + QI ++ DD
Sbjct: 555 RMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDL 607
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 217/385 (56%), Gaps = 6/385 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ TF V+ + + FGRQVHG + S + T L+ MY CG L A
Sbjct: 113 KPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARK 172
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E++ R++ WN ++AG G ++A L E + + + +W +ISG+++ G
Sbjct: 173 VFDEMR-VRDVNVWNALLAGYGKVGEMDEARGLLEMMP--CWVRNAVSWTCVISGYARSG 229
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F++M + P + +VLSACADL +L+LG+ +V +N+ S+
Sbjct: 230 RASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY K G + A F+ + + W +I+G +G A+ +FD M + V
Sbjct: 290 AVIDMYAKSGNITKALEVFES--VNERNVVTWTTIITGLATHGHGAEALVMFDRMVKAGV 347
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+A+LSAC H G VD + F M +G+ P EH+GCM+DLLGR+G+L EA
Sbjct: 348 KPNDVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAE 407
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E+I+ +P E +++ SLL A H + D+GE +L ++EP N +++L+N+Y+ LG
Sbjct: 408 EVIKSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLG 467
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW++ +R+M+ + KL G S+
Sbjct: 468 RWDESRMMRKMMKGIGVKKLAGESS 492
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 149/387 (38%), Gaps = 74/387 (19%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDT-MIGTALVDMYLKCGCLPCAHNVFQELK 73
I+ +S + L + ++HG LK KQS MI T L
Sbjct: 5 INALSLSSGLNWFVTSLKIHGTNLKTLKQSHCFMIITGL--------------------- 43
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-- 131
+R+ L I G A +F H+ F P+ N+MI S + R
Sbjct: 44 -NRDNLNVAKFIEACSNAGHLRYAYSVF---THQPF-PNTYLHNTMIRALSLVDERNAHS 98
Query: 132 -AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A ++ K + P VL +S + G++ HG + + + T LI
Sbjct: 99 IAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLI 158
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE----------------- 233
MY CG AR+ FD+ ++ D WNA+++GYG+ GE +
Sbjct: 159 QMYSSCGGLGDARKVFDEMRVR--DVNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAV 216
Query: 234 ----------------SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
A+E+F M E V P+ + +AVLSAC G ++ +I + +
Sbjct: 217 SWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
D G+ ++D+ +SG + +A E+ + E V + +++ H + G
Sbjct: 277 DHR-GMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLATHGH---G 332
Query: 338 EEMAMKLQEM-----EPENPTPFVILS 359
E + M +P + T ILS
Sbjct: 333 AEALVMFDRMVKAGVKPNDVTFIAILS 359
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 226/444 (50%), Gaps = 67/444 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL------ 62
PN TF V+ AC L L GR VHGL +K + D IG ALV+ Y +C +
Sbjct: 270 PNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRV 329
Query: 63 ------PCAHNVFQELKG------------------SRNILTWNTMIAGMML-------- 90
PC + + ++G N +++N MI G +
Sbjct: 330 CKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSK 389
Query: 91 -----------------------NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
NG +KA+ELFE +E DP TWNSMISG+ G
Sbjct: 390 RLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE---KDPVTWNSMISGYIHSG 446
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA KL+ M + + +++ AC+ L +L+ G+ H H+I+ + + T
Sbjct: 447 QPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGT 506
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A+ F I + A W A+I+G+ +G A+ +FD M ++ +
Sbjct: 507 SLIDMYSKCGSIMEAQTSF--VSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGL 564
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FV VLSAC AG V++ ++IF M+ + + P EH+ C+VDLLGRSG + EA
Sbjct: 565 APNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAE 624
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I+++P E V+ +LL ACW ++ ++GE +A K+ +P+ + +VILSNIYAGLG
Sbjct: 625 EFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLG 684
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW + +R+++ ++ K PG S
Sbjct: 685 RWREKMMVRKILRGFKVKKDPGCS 708
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 168/391 (42%), Gaps = 64/391 (16%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV+S CA L L+ G+ +H L LK +S ++G+AL+ Y C + A VF L
Sbjct: 140 TFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL 199
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ----LGM 128
RN + W+ M+ G + + A+ +F + + D W ++ISGFS+ G
Sbjct: 200 V-RRNEVLWSLMLVGYVTCNVMDDALSVFVKMP----RRDVVAWTTLISGFSKNGDGCGK 254
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E F+L M+S P+ V+ AC L L +G+ HG +++ L D S+ A
Sbjct: 255 ALEMFRLM--MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGA 312
Query: 189 LISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPA 217
L+ Y +C G+ A F+ + +P
Sbjct: 313 LVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNG--MTEMNPV 370
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+N MI GY G+ + + +F+ M + ++ ++S G +DKAL++F
Sbjct: 371 SYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN----TMISVYSRNGEIDKALELFEET 426
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI----RELPEPTVSVYHSLLGACWCHLN 333
++ + M+ SG+ +EA +L R + T S + +L AC C +
Sbjct: 427 KNE----KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGS 482
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
G+ + L + TPF SN+Y G
Sbjct: 483 LQQGQLLHAHLIK------TPFE--SNVYVG 505
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 139/328 (42%), Gaps = 39/328 (11%)
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
I++ N I+ + + A +LF+ + +WN+MIS +S+ G EA L
Sbjct: 72 IISTNIAISNYAKQSKLDVARQLFDQMPQR----TVVSWNTMISSYSKHGRFSEALFLVY 127
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
M + M S +SVLS CA L L+ GK H V+++ E + +AL+ Y C
Sbjct: 128 SMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCF 187
Query: 198 QPSWARRFFDQF-----------------------------EIKPDDPAFWNAMISGYGR 228
+ ARR FD ++ D W +ISG+ +
Sbjct: 188 EIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSK 247
Query: 229 NGE-YESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
NG+ A+E+F LM + + PN +F V+ ACG G + + ++ GL+
Sbjct: 248 NGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLL-MKCGLEYD 306
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
G +V+ +D+A + + + P ++ +SL+ ++ E+ +
Sbjct: 307 PSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGL---ISMGRIEDAELVFNG 363
Query: 347 MEPENPTPFVILSNIYAGLGRWEDVGRI 374
M NP + ++ YA G+ +D R+
Sbjct: 364 MTEMNPVSYNLMIKGYAVGGQMDDSKRL 391
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 119/255 (46%), Gaps = 20/255 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS + TF ++ AC+ L LQ G+ +H +K +S+ +GT+L+DMY KCG +
Sbjct: 461 LSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIME 520
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F + S N+ W +I G +G +A+ LF+ + +G P+ AT+ ++S S
Sbjct: 521 AQTSFVSI-FSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSACS 579
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ G+ E K+F M+ + P+L+ CV +L + +E + + L
Sbjct: 580 RAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHI------REAEEFIKKMPLE 633
Query: 181 KDESMATALIS-----MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D + AL+S M ++ G+ R F P + + + + Y G +
Sbjct: 634 ADGVVWGALLSACWFWMDLEVGE----RVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 689
Query: 236 VEIFDLMQQEKVKPN 250
+ + +++ KVK +
Sbjct: 690 MMVRKILRGFKVKKD 704
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 218/389 (56%), Gaps = 12/389 (3%)
Query: 8 EPNSVTFISVISACASLLYLQ--FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPC 64
EPN +TFI+++S C + G +HG K+ ++ M+GTA++ MY K G
Sbjct: 62 EPNHITFIALLSGCGDVSSGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGK 121
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N +TWNTMI G M +G+ A++LF+ + + D +W +MI+GF
Sbjct: 122 ARLVFDFME-DKNSVTWNTMIDGYMRSGQVNNAVKLFDEMP----ERDLISWTAMINGFV 176
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA F +MQ +G+ P + + L+AC L AL G H +V+ D +
Sbjct: 177 KKGFHEEALAWFREMQISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIR 236
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ +LI +Y +CG +AR FD+ E + WN++I G+ NG ++ F MQ+
Sbjct: 237 VSNSLIDLYCRCGCVEFAREVFDKMEKRT--VVSWNSVIVGFAANGNAHESLVYFRKMQE 294
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E KP++ +F L+AC H G V++ L+ F M D + P+ EH+GC+VDL R+GRL+
Sbjct: 295 EGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLE 354
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSD-LGEEMAMKLQEMEPENPTPFVILSNIY 362
+A +++ +P +P V SLL AC H N+ L E + L ++ ++ + +VILSN+Y
Sbjct: 355 DALNVVQSMPMKPNEVVIGSLLAACRNHGNNTVLAERLVKHLSDLNVKSHSNYVILSNMY 414
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G WE ++R+ + L K PG S+
Sbjct: 415 AADGIWEGASKMRRKMKGLGLKKQPGFSS 443
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 15/284 (5%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S ++W + I + NGR +A + F + G +P+ T+ +++SG + EA
Sbjct: 27 SETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEA-- 84
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSAL-KLGKETHGHVIRADLNKDESMAT--ALIS 191
L + + L T V+ A L K G+ ++ D +D++ T +I
Sbjct: 85 LGDLLHGYACKLGLD-RTHVMVGTAILGMYSKRGRFGKARLV-FDFMEDKNSVTWNTMID 142
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
YM+ GQ + A + FD E+ D W AMI+G+ + G +E A+ F MQ VKP+
Sbjct: 143 GYMRSGQVNNAVKLFD--EMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDY 200
Query: 252 ASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ +A L+AC H G + L + +M+ DF K ++DL R G ++ ARE+
Sbjct: 201 VAIIAALAACTHLGALSFGLWVHRYVMNQDF--KNNIRVSNSLIDLYCRCGCVEFAREVF 258
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
++ + TV ++S++ + N+ E + ++M+ E P
Sbjct: 259 DKMEKRTVVSWNSVIVGFAANGNA---HESLVYFRKMQEEGFKP 299
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 215/384 (55%), Gaps = 13/384 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T++ IS+C+S+ + + + ++ + TAL+DM+ K G L A N+
Sbjct: 256 PDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNI 315
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F EL RN +TWN MI+ G+ A ELF+ + K D +WNSMI+G++Q G
Sbjct: 316 FDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP----KRDVVSWNSMIAGYAQNGE 371
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +LF++M S + P + SVLSAC + ALKL V ++ S
Sbjct: 372 SAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFN 431
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG + A R F + D +N +ISG+ NG + A+++ M++E +
Sbjct: 432 SLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLISGFAANGHGKEAIKLVLTMEEEGI 489
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +++ VL+AC HAG +++ +F + P +H+ CMVDLLGR+G LDEA+
Sbjct: 490 EPDHVTYIGVLTACSHAGLLNEGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAK 544
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P +P VY SLL A H LGE A KL E+EP+N +V+LSNIYA G
Sbjct: 545 MLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFG 604
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R+M+ L K G+S
Sbjct: 605 RWEDVKRVREMMKKGGLKKSVGMS 628
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 171/397 (43%), Gaps = 63/397 (15%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G H LK+ D I A++DMY K G + A N+F+++ R + WN+MI+G
Sbjct: 114 GNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQM-AERTLADWNSMISGCW 172
Query: 90 LNGRSEKAMELFE---------------GLAHEG--------FKPDP----ATWNSMISG 122
+G +A+ LF G A G F P +WN+M S
Sbjct: 173 KSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSA 232
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++Q EA LF +M G+ P +S+C+ + L + + + +
Sbjct: 233 YAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLN 292
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-----------------------------FEIKP 213
+ TAL+ M+ K G AR FD+ F+ P
Sbjct: 293 SFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMP 352
Query: 214 D-DPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
D WN+MI+GY +NGE ++E+F +++ ++P+ + +VLSACGH G + +
Sbjct: 353 KRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSY 412
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--ACW 329
+ ++ + +K F ++ + + G + +A + + + V +++L+ A
Sbjct: 413 WVLDIVREK-NIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAAN 471
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNI-YAGL 365
H + + M+ + +EP++ T +L+ +AGL
Sbjct: 472 GHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGL 508
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 128/259 (49%), Gaps = 25/259 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG----TALVDMY 56
M C+ +P+ VT SV+SAC + L+ V L I ++ + +G +L+ MY
Sbjct: 382 MISCMDIQPDEVTIASVLSACGHIGALKLSYWV----LDIVREKNIKLGISGFNSLIFMY 437
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
KCG + AH +FQ + G+R+++++NT+I+G NG ++A++L + EG +PD T+
Sbjct: 438 SKCGSVADAHRIFQTM-GTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET-----H 171
+++ S G+ E +F+ +Q+ V C+ +L +L K+ ++ H
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQAP-TVDHYACMVDLLGRAGELDEAKMLIQSMPMKPH 555
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
V + LN I + G+ + ++ FE++P + + + + Y G
Sbjct: 556 AGVYGSLLNASR------IHKRVGLGELAASK----LFELEPQNLGNYVLLSNIYASFGR 605
Query: 232 YESAVEIFDLMQQEKVKPN 250
+E + ++M++ +K +
Sbjct: 606 WEDVKRVREMMKKGGLKKS 624
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 122/343 (35%), Gaps = 99/343 (28%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD + ++ M+ +S++G + LF+ S + P ++ A K G
Sbjct: 63 PDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKL-----AGKSGNMF 117
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ---------------------- 208
H +V++ D + A++ MY K GQ AR F+Q
Sbjct: 118 HAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNE 177
Query: 209 ------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD--------------------- 240
F + P + W +M++GY + G+ ESA FD
Sbjct: 178 TEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKE 237
Query: 241 ----------LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD------------ 278
M +E + P+ ++V +S+C G A I M+D
Sbjct: 238 CPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKT 297
Query: 279 -------------------DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
D+ G + + M+ R G+L AREL +P+ V
Sbjct: 298 ALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV 357
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKL---QEMEPENPTPFVILS 359
++S++ + S + E+ ++ +++P+ T +LS
Sbjct: 358 SWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLS 400
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/378 (35%), Positives = 203/378 (53%), Gaps = 40/378 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF V+ ACA+L ++ GR++H ++ + D +G AL+DMY KCGC+ A V
Sbjct: 174 PDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREV 233
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D WNSM++ +SQ G
Sbjct: 234 FDKI------------------------------------LVRDAVLWNSMLAAYSQNGH 257
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
L +M TG+ P+ + + +SA AD +AL G+E HG R + + + TA
Sbjct: 258 PDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTA 317
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG AR F++ +K WNAMI+GY +G A+++F+ M + K
Sbjct: 318 LVDMYAKCGSVRVARNLFERLGVK--RVVSWNAMITGYAMHGHATEALDLFEEMNR-VAK 374
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC H G +++ F M D+ + P +H+ CMVDLLG SGRLDEA
Sbjct: 375 PDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYN 434
Query: 309 LIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI ++ P V+ +LL +C H N +LGE +L E+EP++ +VILSNIYA G+
Sbjct: 435 LIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGK 494
Query: 368 WEDVGRIRQMINDRQLTK 385
WE V ++R+++ DR+L K
Sbjct: 495 WEGVAKLRKLMTDRRLKK 512
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 153/347 (44%), Gaps = 57/347 (16%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
CL+ P + S++ +C + ++ G+Q+H DT+I T LV++Y C L
Sbjct: 70 CLT--PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLS 127
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F + NI WN +I G NG E A++L+
Sbjct: 128 SARLLFDRIP-KHNIFLWNVLIRGYAWNGPYEAAVQLY---------------------- 164
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+++F+ G+VP VL ACA LSA++ G+E H HV++ KD
Sbjct: 165 ---------YQMFD----YGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDV 211
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ ALI MY KCG AR FD+ ++ D WN+M++ Y +NG ++ + + M
Sbjct: 212 FVGAALIDMYAKCGCVGSAREVFDKILVR--DAVLWNSMLAAYSQNGHPDACLSLCSEMV 269
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------CMVDLL 297
++P A+ V +SA + + ++ GL +QE +VD+
Sbjct: 270 LTGLRPTEATLVTAISASADNAALPQGREL-------HGLSWRQEFESHDKVKTALVDMY 322
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEM 340
+ G + AR L L V +++++ H ++ DL EEM
Sbjct: 323 AKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM 369
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 3/188 (1%)
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
+ST + P+ S+L +C A+K GK+ H V A D +AT L+++Y C
Sbjct: 67 ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
S AR FD+ I + WN +I GY NG YE+AV+++ M + P++ +F VL
Sbjct: 127 SSARLLFDR--IPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLK 184
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
AC ++ +I + G + ++D+ + G + ARE+ ++
Sbjct: 185 ACAALSAIEHGREIHEHVVQT-GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAV 243
Query: 320 VYHSLLGA 327
+++S+L A
Sbjct: 244 LWNSMLAA 251
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 209/381 (54%), Gaps = 39/381 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T S++ AC+ L LQ GR +H + K D + ALVDMY KC
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC--------- 280
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R I E A LF+ + D TW MI G+++ G
Sbjct: 281 -------REI----------------EDARFLFDKMPER----DLVTWTVMIGGYAECGN 313
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ LF+KM+ G+VP + +V+ ACA L A+ + ++ R D + TA
Sbjct: 314 ANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTA 373
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I M+ KCG AR FD+ E K + W+AMI+ YG +G+ A+++F +M + +
Sbjct: 374 MIDMHAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGIL 431
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN + V++L AC HAG V++ L+ F++M +D+ ++ +H+ C+VDLLGR+GRLDEA +
Sbjct: 432 PNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALK 491
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI + E ++ + LGAC H + L E+ A L E++P+NP +++LSNIYA GR
Sbjct: 492 LIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGR 551
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
WEDV + R +++ R+L K+PG
Sbjct: 552 WEDVAKTRDLMSQRRLKKIPG 572
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 43/321 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T VI AC L LQ GR +H + K D + ALVDMY+KC
Sbjct: 27 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC-------- 78
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R I E A LF+ + D TW MI G+++ G
Sbjct: 79 --------REI----------------EDARFLFDKMQER----DLVTWTVMIGGYAECG 110
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ LFEKM+ G+VP + +V+ ACA L A+ + ++ R D + T
Sbjct: 111 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 170
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG AR FD+ E K + W+AMI+ YG +G+ A+++F +M +
Sbjct: 171 AMIDMYAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 228
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDE 305
P+ + ++L AC ++ I ++ FGL +HF C +VD+ G+ +++
Sbjct: 229 LPDKITLASLLYACSDLKNLQMGRLIHHIV-YKFGL--DLDHFVCAALVDMYGKCREIED 285
Query: 306 ARELIRELPEPTVSVYHSLLG 326
AR L ++PE + + ++G
Sbjct: 286 ARFLFDKMPERDLVTWTVMIG 306
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 9/216 (4%)
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
M+ GF+++G F F ++ G P + V+ AC DL L++G+ H V +
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L+ D + AL+ MY+KC + AR FD+ + + D W MI GY G+ ++ +
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQER--DLVTWTVMIGGYAECGKANESLVL 118
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVD 295
F+ M++E V P+ + V V+ AC G + KA ++DD K Q M+D
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKA----RIIDDYIQRKKFQLDVILGTAMID 174
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ + G ++ ARE+ + E V + +++ A H
Sbjct: 175 MYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYH 210
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 215/389 (55%), Gaps = 8/389 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C S N+ TF S++ AC++L L+ Q+H K+ ++D +L++ Y G
Sbjct: 137 CCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFK 196
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH +F + + ++WN++I G G+ + A+ LF + + + +W +MISG+
Sbjct: 197 LAHLLFDRIPKP-DAVSWNSVIKGYAKAGKMDIALTLFRKMVEK----NAISWTTMISGY 251
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q GM EA +LF +MQ++ + P + + LSACA L AL+ GK H ++ + + D
Sbjct: 252 VQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDS 311
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ LI MY KCG A F + K W A+ISGY +G A+ F MQ
Sbjct: 312 VLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQA--WTALISGYAYHGHGREAISKFMEMQ 369
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +KPN +F VL+AC + G V++ IF M+ D+ LKP EH+GC+VDLL R+G L
Sbjct: 370 KMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLL 429
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
DEA+ I+E+P +P ++ +LL AC H N +LGEE+ L ++P + +V +NI+
Sbjct: 430 DEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIH 489
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +W+ R+++ ++ + K+PG S
Sbjct: 490 AMGKKWDKAAETRRLMKEQGVAKVPGCST 518
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 101 FEGLAHEGF-KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
+ + +GF +PD WN MI GFS + L+++M + S+L AC+
Sbjct: 96 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACS 155
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF- 218
+LSAL+ + H + + D +LI+ Y G A FD+ KPD ++
Sbjct: 156 NLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIP-KPDAVSWN 214
Query: 219 -----------------------------WNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
W MISGY + G ++ A+++F MQ V+P
Sbjct: 215 SVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEP 274
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH-FGC-MVDLLGRSGRLDEAR 307
++ S LSAC G +++ I + + + + + GC ++D+ + G + EA
Sbjct: 275 DNVSLANALSACAQLGALEQGKWIHSYLTKT---RIRMDSVLGCVLIDMYAKCGDMGEAL 331
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
E+ + + +V + +L+ H + G E K EM+ P VI
Sbjct: 332 EVFKNIQRKSVQAWTALISGYAYHGH---GREAISKFMEMQKMGIKPNVI 378
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 220/416 (52%), Gaps = 37/416 (8%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT ++++ A L G + H +K + + D ++ + ++DMY KCG + CA VF
Sbjct: 356 DCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVF 415
Query: 70 --------------------QELKGSR--------------NILTWNTMIAGMMLNGRSE 95
Q L G N+++WN++I G NG+
Sbjct: 416 SCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVA 475
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A +F + G P+ TW +M+SG Q G A +F +MQ G+ P+ +TS L
Sbjct: 476 EARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSAL 535
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
S C ++ LK G+ HG+V+R DL++ + T+++ MY KCG A+ F K +
Sbjct: 536 SGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTK--E 593
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMIS Y +G+ A+ +F M++E + P+ + +VLSAC H G + + +++F
Sbjct: 594 LYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFK 653
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M + +KP +EH+GC+V LL G+LDEA I +P P + SLL AC + +
Sbjct: 654 YMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDI 713
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L + +A L +++P+N +V LSN+YA +G+W+ V +R ++ ++ L K+PG S
Sbjct: 714 ELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCS 769
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 52/378 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ +V+ AC L +++FG+ VH +K I + + T+LVDMY KCG + A
Sbjct: 152 PDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGK 211
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ SE+ + TWNSM+ ++Q G
Sbjct: 212 VFDEM---------------------SER---------------NDVTWNSMVVTYAQNG 235
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA ++F +M+ G+ +L ++ +ACA+ A+ G++ HG + L D + +
Sbjct: 236 MNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGS 295
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++++ Y K G A F +K D WN +++GY + G E A+E+ +M++E +
Sbjct: 296 SIMNFYFKVGLIEEAEVVFRNMAVK--DVVTWNLVVAGYAQFGMVEKALEMCCVMREEGL 353
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRSGRL 303
+ + + A+L+ D + M + +K E ++D+ + GR+
Sbjct: 354 RFDCVTLSALLAVAA-----DTRDLVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRM 408
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN-IY 362
D AR + + + + +++++L AC L E +M+ E+ P V+ N +
Sbjct: 409 DCARRVFSCVRKKDIVLWNTMLAAC---AEQGLSGEALKLFFQMQLESVPPNVVSWNSLI 465
Query: 363 AGLGRWEDVGRIRQMIND 380
G + V R M +
Sbjct: 466 FGFFKNGQVAEARNMFAE 483
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 39/308 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E V +ACA+ + GRQ HGL + + D ++G+++++ Y K G + A
Sbjct: 253 EVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEV 312
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + ++++TWN ++AG G EKA+E+ + EG + D T
Sbjct: 313 VFRNM-AVKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVT------------ 359
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++++L+ AD L LG + H + ++ D D +++
Sbjct: 360 -----------------------LSALLAVAADTRDLVLGMKAHAYCVKNDFEGDVVVSS 396
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+I MY KCG+ ARR F ++ D WN M++ G A+++F MQ E V
Sbjct: 397 GIIDMYAKCGRMDCARRVFSC--VRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLESV 454
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ +++ G V +A +F M G+ P + M+ L ++G A
Sbjct: 455 PPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSS-GVMPNLITWTTMMSGLVQNGFGSGAM 513
Query: 308 ELIRELPE 315
+ RE+ +
Sbjct: 514 MVFREMQD 521
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 42/305 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS++ S +S C S+ L+ GR +HG ++ + I T+++DMY KCG L A
Sbjct: 525 RPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKC 584
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + ++ + +N MI+ +G++ +A+ LF+ + EG PD T S++S S G
Sbjct: 585 VFK-MCSTKELYVYNAMISAYASHGQAREALVLFKQMEKEGIVPDHITLTSVLSACSHGG 643
Query: 128 MRFEAFKLFEKMQS-TGMVPS---LKCVTSVLSACADL-----SALKLGKETHGHVIRAD 178
+ E K+F+ M S M PS C+ +L+ L + L + H++ +
Sbjct: 644 LMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILTMPSHPDAHILGSL 703
Query: 179 L-----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
L N D +A + +K + PD+ + A+ + Y G+++
Sbjct: 704 LTACGQNNDIELADYIAKWLLK---------------LDPDNSGNYVALSNVYAAVGKWD 748
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+ LM+++ ++ + C V + L +F D PK E
Sbjct: 749 KVSNLRGLMKEKGLRK--------IPGCSWI-EVGQELHVFIASDRS---HPKTEEIYVT 796
Query: 294 VDLLG 298
+DLLG
Sbjct: 797 LDLLG 801
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G SE A LF + P+ +W ++I ++ G EA + KMQ G+ P +
Sbjct: 102 GASEPATRLFR----DSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVL 157
Query: 152 TSVLSACADLSALKLGKETHGHVIRA-DLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+VL AC L ++ GK H V++ L + +AT+L+ MY KCG A + FD+
Sbjct: 158 PNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMS 217
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ D WN+M+ Y +NG + A+ +F M+ + V+ + +AC ++ V +
Sbjct: 218 ERND--VTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEG 275
Query: 271 LQ 272
Q
Sbjct: 276 RQ 277
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 112/274 (40%), Gaps = 14/274 (5%)
Query: 111 PDPATWNSM-ISGFSQL---GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
P T N ++ FS L G EA +M S + ++L C AL L
Sbjct: 10 PQTLTPNQFSLTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPL 69
Query: 167 GKETHGHVIR--ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMI 223
+ H VI+ ++ + + L+ +Y KCG A R F P F W A+I
Sbjct: 70 ALQLHADVIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRD---SPSPNVFSWAAII 126
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+ R G E A+ + MQQ+ + P++ VL ACG V + + GL
Sbjct: 127 GLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGL 186
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
K +VD+ G+ G +++A ++ E+ E ++S++ + + + +E
Sbjct: 187 KECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVT---YAQNGMNQEAIRV 243
Query: 344 LQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQ 376
+EM + V LS + E VG RQ
Sbjct: 244 FREMRLQGVEVTLVALSGFFTACANSEAVGEGRQ 277
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 156/465 (33%), Positives = 239/465 (51%), Gaps = 82/465 (17%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS PN TF I +C+SL L G+Q+H SD + +AL+DMY KCG L
Sbjct: 80 LSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLND 139
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------------------- 102
A +F E+ RN+++W +MI+G + N R+ +A+ LF+
Sbjct: 140 ARKLFDEIP-ERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDS 198
Query: 103 -----------------------GLA-HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK 138
GLA +GF+ A N+++ +++ G + K+F+
Sbjct: 199 VLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDG 258
Query: 139 MQSTGMVP--SLKCV------------------------------TSVLSACADLSALKL 166
M+ T + SL V ++VL ACA AL++
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
GK H V++ +L + + T+++ MY KCG+ AR+ FD+ +K + W M++GY
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDR--LKRKNVKSWTVMVAGY 376
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
G +G + A+++F M + +KPN +FV+VL+AC HAG + + F M +F ++P
Sbjct: 377 GMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPG 436
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
EH+ CMVDLLGR+G L EA LI+E+ +P V+ SLLGAC H N +LGE A KL
Sbjct: 437 IEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLF 496
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+++P N +V+LSNIYA GRW+DV R+R ++ + L K PG S
Sbjct: 497 KLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYS 541
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 26/235 (11%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K +WNS+I+ F++ G +A F M+ + P+ + +C+ L L GK+
Sbjct: 48 KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H D +A+ALI MY KCG + AR+ FD EI + W +MISGY +N
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFD--EIPERNVVSWTSMISGYVQN 165
Query: 230 GEYESAVEIF-----------DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
AV +F D + V +S V+SAC + + ++ +
Sbjct: 166 ERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACAR-------VCVKSVTE 218
Query: 279 DDFGLKPKQEHFGC------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
GL K+ GC ++D + G + +R++ + E V ++SL+
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAV 273
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 213/387 (55%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +V+S C ++ GRQ+H S+ + AL+D+Y KCG + AH
Sbjct: 207 KPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHG 266
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
LFEGL ++ D +WN++I G++ +
Sbjct: 267 --------------------------------LFEGLQYK----DVISWNTLIGGYAYIN 290
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--DLNKDESM 185
EA +F++M G P+ + S+L ACA L A+ +G+ H ++ + + + S+
Sbjct: 291 HHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSL 350
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A + FD I + NAMI G+ +G ++A ++ M+++
Sbjct: 351 QTSLIDMYAKCGNIEAANQVFDT--ILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKD 408
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ +FV +LSAC HAG D +IF M D+ ++PK EH+GCM+DLLGRSG E
Sbjct: 409 GIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKE 468
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELI + EP ++ SLL AC H N +LGE +A KL ++EP+NP +V+LSNIYA
Sbjct: 469 AEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYAT 528
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
RW+DV R+R ++ND+ L K+PG S+
Sbjct: 529 SARWDDVARVRTLLNDKGLKKVPGCSS 555
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 14/369 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF + +CA Q G+Q+H LK D + T+L+ MY + G + AH V
Sbjct: 76 PNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKV 135
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+++++ MI G G +KA ++F+ + + D +WN+MISG++++G
Sbjct: 136 F-DTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIK----DVVSWNAMISGYAEIGR 190
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +M + P + +VLS C ++LG++ H + + + A
Sbjct: 191 YKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNA 250
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F+ + K D WN +I GY ++ A+ +F M +
Sbjct: 251 LIDLYSKCGEMERAHGLFEGLQYK--DVISWNTLIGGYAYINHHKEALLVFQEMLKLGET 308
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++L AC H G +D I +D G+ ++D+ + G ++ A
Sbjct: 309 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAAN 368
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
++ + ++S ++++ H +D ++ MK +EP++ T +LS +AG
Sbjct: 369 QVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAG 428
Query: 365 LGRWEDVGR 373
L D+GR
Sbjct: 429 LS---DLGR 434
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 158/326 (48%), Gaps = 16/326 (4%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N L+WNTMI G L+ A+ L+ + G P+ T+ +
Sbjct: 28 LPYAISVFKSIQ-EPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFK 86
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
++ E ++ ++ G+ L TS++S A + E V ++
Sbjct: 87 SCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIV----EDAHKVFDTSSHR 142
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D TA+I+ Y G A++ FD+ IK D WNAMISGY G Y+ A+E+F+
Sbjct: 143 DVVSYTAMITGYASRGNMDKAQKMFDEIPIK--DVVSWNAMISGYAEIGRYKEALELFNE 200
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M + VKP+ ++ VLS C H+G+V+ QI + + D+ G + ++DL + G
Sbjct: 201 MMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWI-DNHGFGSNLKLVNALIDLYSKCG 259
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP--ENPTPFVILS 359
++ A L L V +++L+G + ++N +E + QEM E P +LS
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGG-YAYINHH--KEALLVFQEMLKLGETPNDVTMLS 316
Query: 360 NI--YAGLGRWEDVGRIRQMINDRQL 383
+ A LG D+GR + D++L
Sbjct: 317 ILPACAHLGAI-DIGRWIHVYIDKKL 341
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-----SDTMIGTALVDMYLKC 59
L + PN VT +S++ ACA L + GR +H + I+K+ ++T + T+L+DMY KC
Sbjct: 305 LGETPNDVTMLSILPACAHLGAIDIGRWIH---VYIDKKLKGIITNTSLQTSLIDMYAKC 361
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G + A+ VF + ++++ + N MI G ++GR++ A +L + +G +PD T+ +
Sbjct: 362 GNIEAANQVFDTIL-NKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGL 420
Query: 120 ISGFSQLGMRFEAFKLFEKM 139
+S S G+ K+F+ M
Sbjct: 421 LSACSHAGLSDLGRKIFKSM 440
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 223/386 (57%), Gaps = 11/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T + ++ C L + G+ VH K S+ ++ AL+DMY+KC L A
Sbjct: 161 EPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARK 220
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++WNT+IAG G E A +LF + D +WNS+ISG++Q G
Sbjct: 221 VFDG-PMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTR----DIVSWNSLISGYAQNG 275
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA- 186
LF +M + + P + +++SA A++ AL G+ HG ++ L K E+ +
Sbjct: 276 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSG 334
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+ALI MY KCG A F+Q I D W MI+G+ +G A+E+F +MQ E
Sbjct: 335 SALIDMYCKCGSIERAFVIFNQ--IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE- 391
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPN +FV+VL+AC H+G VD+ L+IF+ M + ++P EH+GC+VDLL RSGRL +A
Sbjct: 392 TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDA 451
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+I ++P EP+ S++ ++L AC H N +L E M+L ++EPE +++LSN+YA
Sbjct: 452 IGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATC 511
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW IR+++N R + K+ G S+
Sbjct: 512 GRWSYSDSIREVMNSRGVKKIAGCSS 537
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 26/356 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAHN 67
P+ TF+ ++ ++ +Q+H L S + + +L+ Y+ GC CA
Sbjct: 63 PDRQTFLYLLQTTK---FVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQ 119
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF---- 123
+F E+ RN++++NTMI G G +ELF + G +PD T ++
Sbjct: 120 LFDEM-SDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLG 178
Query: 124 -SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++LG A +++ + +L ++L + LKL ++ V + KD
Sbjct: 179 ETKLGKSVHA-----QIEKSIGSSNLILYNALLDMYVKCNELKLARK----VFDGPMEKD 229
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+I+ Y K G+ A F+Q I D WN++ISGY +NG+Y + +F M
Sbjct: 230 TVSWNTIIAGYAKVGELELACDLFNQ--IPTRDIVSWNSLISGYAQNGDYVTVKCLFTRM 287
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRS 300
E VKP+ + V ++SA G +D+ I + + K E F ++D+ +
Sbjct: 288 FAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLA---VKMLTKIEAFSGSALIDMYCKC 344
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
G ++ A + ++PE V+ + +++ H + E+ +Q N FV
Sbjct: 345 GSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFV 400
>gi|297844718|ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336082|gb|EFH66499.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 210/362 (58%), Gaps = 8/362 (2%)
Query: 19 SACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNI 78
S CA L L +VHG +K + AL+ +Y K G + A +F++++ ++ I
Sbjct: 302 SVCAELGALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQGKVKDAEQLFRQIR-NKGI 360
Query: 79 LTWNTMIAGMMLNGRSEKAMELFEGLAHE----GFKPDPATWNSMISGFSQLGMRFEAFK 134
+WN++I + G+ ++A+ LF L K + TW S+I G + G + +
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFTELEEMDDVCNVKANVVTWTSVIKGCNVQGRGDYSLE 420
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +MQ + ++ + + +LS CA+L AL LG+E HGHVIR ++ + + AL++MY
Sbjct: 421 YFRRMQFSKVLSNSVTICCILSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYT 480
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG F+ I+ D WN++I GYG +G E A+ +FD M + P+ +
Sbjct: 481 KCGLLREGSLVFEA--IRDKDLISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIAL 538
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
VAVLSAC HAG V+K +IF M FGL+P+QEH+ C+VDLLGR G L EA E+++ +P
Sbjct: 539 VAVLSACSHAGLVEKGRKIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
EP V V +LL +C H N D+ E +A +L+ +EPE +++LSNIY+ GRWE+ +
Sbjct: 599 MEPKVCVLGALLNSCRMHKNMDIAEIIASQLRVLEPERTGSYMLLSNIYSAGGRWEESAK 658
Query: 374 IR 375
+R
Sbjct: 659 VR 660
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 7/265 (2%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ AC L R H ++I + + + L+ +Y K + A+N+F E+ R
Sbjct: 164 ILRACRYLGRFGLCRAFHSQVIQIGLKENLHVANELLTLYPKAARIGDAYNLFVEMP-VR 222
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N ++WN MI G E A+++FE + E FKPD TW S++S SQ G + K F
Sbjct: 223 NRMSWNVMIKGFSQEFDCESAVKIFEWMQREDFKPDEVTWTSLLSCHSQCGKFEDVIKYF 282
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M+ + S + + S CA+L AL + + HG VI+ + ALI +Y K
Sbjct: 283 HVMRMSASAVSGEALAVFFSVCAELGALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQ 342
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE----KVKPNSA 252
G+ A + F Q K + WN++I+ + G+ + A+ +F +++ VK N
Sbjct: 343 GKVKDAEQLFRQIRNKGIES--WNSLITSFVDAGKLDEALSLFTELEEMDDVCNVKANVV 400
Query: 253 SFVAVLSACGHAGHVDKALQIFTMM 277
++ +V+ C G D +L+ F M
Sbjct: 401 TWTSVIKGCNVQGRGDYSLEYFRRM 425
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVT ++S CA L L GR++HG ++ + ++ ALV+MY KCG L VF
Sbjct: 433 NSVTICCILSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLLREGSLVF 492
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ +++++WN++I G ++G EKA+ +F+ + G PD +++S S G+
Sbjct: 493 EAIR-DKDLISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSACSHAGLV 551
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ K+F M + G+ P + ++ + LK E
Sbjct: 552 EKGRKIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D WNS++ G+ AF+L+ M+ G+ + +L AC L L + H
Sbjct: 122 DLRLWNSILKANVSHGLYENAFELYRGMRERGLTGDGFILPLILRACRYLGRFGLCRAFH 181
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
VI+ L ++ +A L+++Y K + A F + ++ + WN MI G+ + +
Sbjct: 182 SQVIQIGLKENLHVANELLTLYPKAARIGDAYNLFVEMPVR--NRMSWNVMIKGFSQEFD 239
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-------------- 277
ESAV+IF+ MQ+E KP+ ++ ++LS G + ++ F +M
Sbjct: 240 CESAVKIFEWMQREDFKPDEVTWTSLLSCHSQCGKFEDVIKYFHVMRMSASAVSGEALAV 299
Query: 278 --------------DDDFGLKPKQEHFGC------MVDLLGRSGRLDEARELIRELPEPT 317
D G K C ++ + G+ G++ +A +L R++
Sbjct: 300 FFSVCAELGALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQGKVKDAEQLFRQIRNKG 359
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+ ++SL+ + D + +L+EM+ + N+ A + W V
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFTELEEMDD--------VCNVKANVVTWTSV 405
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 212/384 (55%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT I V+SA A L L GR++H ++ + AL+DMY+KC + A +
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + + +++W TM+ G G E A+ LF +E + D WN++I GF Q
Sbjct: 314 FENMT-KKTVVSWTTMVIGYAKFGLLESAVRLF----NEMPEKDVVLWNALIGGFVQAKR 368
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ++ + P V + LSAC+ L AL +G H +V + +L + ++ TA
Sbjct: 369 SKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTA 428
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + F+ E+ + W A+I G +G+ +A+ F M +
Sbjct: 429 LVDMYAKCGNIKKAIQVFE--EMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC H G VD+ F M +G+ PK +H+ C+VDLLGR+G L+EA E
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P EP V+ +L H N +GE A KL E++P + +V+L+N+Y
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANM 606
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WE ++R+M+ +R + K PG S+
Sbjct: 607 WEQARKVRKMMEERGVEKTPGCSS 630
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ + CA ++ G +++ SD + A++ + + CG L A +
Sbjct: 153 PDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKL 212
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E R++++WN++I G + G +++A +L+ + PD T ++S +QL
Sbjct: 213 FDE-SCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLEN 271
Query: 129 RFEAFKLFEKMQSTGM---VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
KL + ++ G+ VP + + C ++ A K ++ ++ K +
Sbjct: 272 LALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAK--------ILFENMTKKTVV 323
Query: 186 A-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T ++ Y K G A R F+ E+ D WNA+I G+ + + A+ +F MQ
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFN--EMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQA 381
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V P+ + V LSAC G +D + + +D L +VD+ + G +
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKH-NLTMNVALGTALVDMYAKCGNIK 440
Query: 305 EARELIRELP 314
+A ++ E+P
Sbjct: 441 KAIQVFEEMP 450
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 212/384 (55%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT I V+SA A L L GR++H ++ + AL+DMY+KC + A +
Sbjct: 254 PDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKIL 313
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + + +++W TM+ G G E A+ LF +E + D WN++I GF Q
Sbjct: 314 FENMT-KKTVVSWTTMVIGYAKFGLLESAVRLF----NEMPEKDVVLWNALIGGFVQAKR 368
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ++ + P V + LSAC+ L AL +G H +V + +L + ++ TA
Sbjct: 369 SKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTA 428
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + F+ E+ + W A+I G +G+ +A+ F M +
Sbjct: 429 LVDMYAKCGNIKKAIQVFE--EMPGRNSLTWTAIICGLALHGQPHAAISYFSEMISIGLV 486
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC H G VD+ F M +G+ PK +H+ C+VDLLGR+G L+EA E
Sbjct: 487 PDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P EP V+ +L H N +GE A KL E++P + +V+L+N+Y
Sbjct: 547 LIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVLLANMYGDANM 606
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WE ++R+M+ +R + K PG S+
Sbjct: 607 WEQARKVRKMMEERGVEKTPGCSS 630
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 16/310 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ + CA ++ G +++ SD + A++ + + CG L A +
Sbjct: 153 PDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKL 212
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E R++++WN++I G + G +++A +L+ + PD T ++S +QL
Sbjct: 213 FDE-SCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLEN 271
Query: 129 RFEAFKLFEKMQSTGM---VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
KL + ++ G+ VP + + C ++ A K ++ ++ K +
Sbjct: 272 LALGRKLHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAK--------ILFENMTKKTVV 323
Query: 186 A-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T ++ Y K G A R F+ E+ D WNA+I G+ + + A+ +F MQ
Sbjct: 324 SWTTMVIGYAKFGLLESAVRLFN--EMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQA 381
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
V P+ + V LSAC G +D + + +D L +VD+ + G +
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKH-NLTMNVALGTALVDMYAKCGNIK 440
Query: 305 EARELIRELP 314
+A ++ E+P
Sbjct: 441 KAIQVFEEMP 450
>gi|108707417|gb|ABF95212.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 469
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 45/416 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+ + ACA L + GR +H L L + SD + TAL+DMY KCG + A VF E+
Sbjct: 52 TALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEM-A 110
Query: 75 SR------------------------------------NILTWNTMIAGMMLNGRSEKAM 98
SR +++TWN +++G L G A
Sbjct: 111 SRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAG 170
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRF-EAFKLFEKMQSTG--MVPSLKCVTSVL 155
+L + +GF+PD TW S +SG S L ++ A LF M G ++PS ++++L
Sbjct: 171 DLVGAMKDDGFQPDVVTWTSRVSG-SVLNFQYGRARALFRAMMVAGGRVLPSSATISTIL 229
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A A+++ +K GKE HG+ + A + ++ ++++AL+ MY KCG ARR FD+ +
Sbjct: 230 PAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQR--S 287
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+MI G +G + AV +FD M ++ KP+ +F AVL+AC + G V+ ++
Sbjct: 288 TVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYR 347
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M ++G++P+ EH+ CMV LLGR+GRLDEA IR +P EP V+ +LLGAC H N
Sbjct: 348 AMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNI 407
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E A +L +EP+N ++LS+ A G+ +DV +I++++ R+L KL S
Sbjct: 408 ELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYS 463
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 13/253 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T +++ A A++ ++ G++VHG ++ + + + +ALVDMY KCG + A +
Sbjct: 220 PSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRL 279
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+ +TWN+MI G+ +G ++A+ LF+ + +G KPD T+ ++++ S GM
Sbjct: 280 FDKMP-QRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGM 338
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L+ MQ G+ P L+ C+ +L L E +G + L D
Sbjct: 339 VEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLD------EAYGFIRAMPLEPDRF 392
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + ++PD+ A + S G+ + +I L++
Sbjct: 393 VWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVK 452
Query: 244 QEKVKP-NSASFV 255
+ ++K +S S+V
Sbjct: 453 RRRLKKLDSYSWV 465
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLF---EKMQ--STGMV-PSLKCVTSVLSACADLSALKLG 167
++W ++ S+ G + +LF ++Q S G V P V + L ACA L+ + G
Sbjct: 7 SSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASG 66
Query: 168 KETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
+ H V+ R L D ATAL+ MY KCG + AR+ FD+ + DP WNA+++ Y
Sbjct: 67 RLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASR-GDPVVWNALLACY 125
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+G E A+ + M+ + P+ ++ V+S AG A + M DD G +P
Sbjct: 126 ARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDD-GFQP 183
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 219/384 (57%), Gaps = 6/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F C S + + G QV +K+ +++ + AL+ MY+ + A V
Sbjct: 100 PNQYSFAFAFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKV 159
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +R++ +WN M++G G+ ++A +LF+ + + D +W +MISG Q+G
Sbjct: 160 F-DWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEK----DVVSWTTMISGCLQVGY 214
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +F M + GM P+ + S L+ACA+L AL G+ H ++ + ++ +E +
Sbjct: 215 FMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAG 274
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ +A + F+ WNAMI G+ +G+ + A+E+F+ M+ EKV
Sbjct: 275 LIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVS 334
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FVA+L+AC H V++ F M + +KP+ EH+GC+VDLLGR+GRL EA E
Sbjct: 335 PNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEE 394
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I + P V+++ +LL AC H ++++GE + ++E++P + V+L+NIY+ G
Sbjct: 395 IISSMHLTPDVAIWGALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGN 454
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W + +R+ I + K PG S+
Sbjct: 455 WNEARTLREKIAESGKKKTPGCSS 478
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 119/303 (39%), Gaps = 51/303 (16%)
Query: 110 KPDPATWNSMIS--GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
+PD +N++I FS K ++ +VP+ C + G
Sbjct: 62 QPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAFKGCGSGVGVLEG 121
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGY 226
++ H I+ L + + ALI MY+ AR+ FD P+ + WN M+SGY
Sbjct: 122 EQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDW---SPNRDMYSWNIMLSGY 178
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
R G+ + A ++FD M ++ V S+ ++S C G+ +AL IF M G+ P
Sbjct: 179 ARLGKMDEARQLFDEMPEKDV----VSWTTMISGCLQVGYFMEALDIFHNMLAK-GMSPN 233
Query: 287 QEHFGC-----------------------------------MVDLLGRSGRLDEARELIR 311
+ ++D+ + G L+ A +L
Sbjct: 234 EYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFASKLFN 293
Query: 312 ELPEPTVSV--YHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGLGR 367
P V +++++G H S E+ MK++++ P N FV L N + R
Sbjct: 294 SNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSP-NKVTFVALLNACSHGNR 352
Query: 368 WED 370
E+
Sbjct: 353 VEE 355
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 200/386 (51%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN ++ +SV+ AC L L+ G V ++ + + +G+AL+ MY KCG L A
Sbjct: 225 QPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARR 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +K K D TWN+MI+G++Q G
Sbjct: 285 IFDSMK------------------------------------KKDKVTWNAMITGYAQNG 308
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA KLF+ M+ + P + +LSACA + AL LGK+ + D + T
Sbjct: 309 MSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGT 368
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-- 245
AL+ MY KCG A R F + + + WNAMIS +G+ + A+ +F M E
Sbjct: 369 ALVDMYAKCGSLDNAFRVF--YGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGG 426
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN +FV VLSAC HAG VD+ ++F MM FGL PK EH+ CMVDL R+G L+E
Sbjct: 427 TVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEE 486
Query: 306 ARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + + +PE P + +LLGAC N D+ E + L E+EP N +VI S +YA
Sbjct: 487 AWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYAN 546
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
L RW+D R+R ++ + ++K PG S
Sbjct: 547 LRRWDDSARMRMLMKQKGVSKTPGCS 572
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 39/324 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN++T+ + AC++LL ++ GR H ++ D + +L+ MY +CG + A
Sbjct: 124 KPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARK 183
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ + D +WNSMISG+S++
Sbjct: 184 VFDEIS------------------------------------QKDLVSWNSMISGYSKMR 207
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M G P+ + SVL AC +L LKLG V+ + + M +
Sbjct: 208 HAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGS 267
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ARR FD +K D WNAMI+GY +NG E A+++F M+
Sbjct: 268 ALIHMYGKCGDLVSARRIFD--SMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSST 325
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + + +LSAC G +D Q+ + + G + +VD+ + G LD A
Sbjct: 326 APDQITLIGILSACASIGALDLGKQV-EIYASERGFQDDVYVGTALVDMYAKCGSLDNAF 384
Query: 308 ELIRELPEPTVSVYHSLLGACWCH 331
+ +P +++++ A H
Sbjct: 385 RVFYGMPNKNEVSWNAMISALAFH 408
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 142/293 (48%), Gaps = 26/293 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +T I ++SACAS+ L G+QV + Q D +GTALVDMY KCG L A
Sbjct: 324 STAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNA 383
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISGF 123
VF + ++N ++WN MI+ + +G++++A+ LF+ + +EG P+ T+ ++S
Sbjct: 384 FRVFYGMP-NKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC 442
Query: 124 SQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADL 179
G+ E +LF M S+ G+VP ++ C+ + S L +E V+
Sbjct: 443 VHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHL------EEAWDFVMTMPE 496
Query: 180 NKDESMATALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISG--YGRNGEYESAV 236
DE + AL+ K + R E++P + N +IS Y ++ +
Sbjct: 497 KPDEVILGALLGACQKRKNIDISERVMKLLLELEPSNSG--NYVISSKLYANLRRWDDSA 554
Query: 237 EIFDLMQQEKV-KPNSASFVAVLSACG--HAGHV-----DKALQIFTMMDDDF 281
+ LM+Q+ V K S++ + S HAG V + QI ++ DD
Sbjct: 555 RMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLHQEWIEIHQILDLLIDDL 607
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 111 PDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P ++N MI G S + A + + +M+ G+ P+ + AC++L A++ G+
Sbjct: 89 PTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRM 148
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H VIR L++D ++ +LI+MY +CG+ AR+ FD EI D WN+MISGY +
Sbjct: 149 GHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFD--EISQKDLVSWNSMISGYSKM 206
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ-- 287
AV +F M + +PN S V+VL ACG G + + ++F ++ K
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWV-----EEFVVENKMTL 261
Query: 288 EHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
+F ++ + G+ G L AR + + + +++++ + + + EE Q
Sbjct: 262 NYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITG---YAQNGMSEEAIKLFQ 318
Query: 346 EMEPENPTP 354
+M + P
Sbjct: 319 DMRMSSTAP 327
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 224/382 (58%), Gaps = 12/382 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +++ +++ A + ++ R + Q + + T ++ Y++ G A N+F
Sbjct: 170 NVISYTAMVDGYAKIGEIEQARAL----FNCMPQKNVVSWTVMISGYVENGKFDEAENLF 225
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ +NI+ MI G G+++KA LF+ + D A+WN+MI+G++Q G
Sbjct: 226 EQMP-DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCR----DLASWNAMITGYAQNGSG 280
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KL +M GM P + SVL+AC+ L++L+ G++TH V+++ S+ AL
Sbjct: 281 EEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNAL 340
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY KCG + F Q I D WNAMI+ + R+G Y+ A+ F M+ +V+P
Sbjct: 341 ITMYCKCGSILDSELAFRQ--IDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEP 398
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+++LSACGHAG V ++L F M + + + P+ EHF C+VD+L R G++++A ++
Sbjct: 399 DGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKI 458
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I+E+P E ++ +LL AC HLN LGE A K+ E+EP+N +V+LSNIYA G W
Sbjct: 459 IQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMW 518
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+V R+R ++ ++ + K P S
Sbjct: 519 GEVTRVRGLMREQGVKKQPAYS 540
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 168/368 (45%), Gaps = 33/368 (8%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT+ +++ Y K GC + +F L ++N+++WN+MIAG + + R ++A + F+ +
Sbjct: 77 DTVSWNSIITGYWKNGCFDESKRLFG-LMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAM 135
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM------QSTGMVPSLKCVTSVLSAC 158
+ A+WN+MISG + EA +LFE+M T MV + + A
Sbjct: 136 PQR----NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 191
Query: 159 ADLSALKLGKET------HGHVIRADLNKDESM-----------ATALISMYMKCGQPSW 201
A + + G+V ++ E++ TA+I+ Y K G+
Sbjct: 192 ALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK 251
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A+ FDQ + D A WNAMI+GY +NG E A+++ M + ++P+ ++ ++VL+AC
Sbjct: 252 AKILFDQIPCR--DLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTAC 309
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
+ + + ++ G + + ++ + + G + ++ R++ P V +
Sbjct: 310 SSLASLQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSW 368
Query: 322 HSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
++++ A H + L M+ +EP+ T +LS E + MI
Sbjct: 369 NAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIE 428
Query: 380 DRQLTKLP 387
++ P
Sbjct: 429 SYKIVPRP 436
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 121/251 (48%), Gaps = 14/251 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ISV++AC+SL LQ GR+ H L LK +S I AL+ MY KCG + +
Sbjct: 296 QPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSEL 355
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+++ ++++WN MIA +G ++A+ F + +PD T+ S++S G
Sbjct: 356 AFRQIDHP-DVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAG 414
Query: 128 MRFEAFKLFEKM-QSTGMVPS---LKCVTSVLSACADL-SALKLGKETHGHVIRADLNK- 181
E+ F M +S +VP C+ +LS + A K+ +E AD
Sbjct: 415 KVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMP---FEADCGIW 471
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+A + + +K G+ + A++ E++P + + + + Y G + + L
Sbjct: 472 GALLAACHVHLNVKLGELA-AKKI---VELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGL 527
Query: 242 MQQEKVKPNSA 252
M+++ VK A
Sbjct: 528 MREQGVKKQPA 538
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
++ H I+ +D I + G AR+ FD E+ D WN++I+G
Sbjct: 30 FNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFD--EMPHRDTVSWNSIITG 87
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y +NG ++ + +F LM + N S+ ++++ C +D+A Q F M +
Sbjct: 88 YWKNGCFDESKRLFGLMPTK----NVVSWNSMIAGCIEDERIDEAWQYFQAMP-----QR 138
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE-EMAMKL 344
+ M+ L R R++EA L E+P V Y +++ + +GE E A L
Sbjct: 139 NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDG-----YAKIGEIEQARAL 193
Query: 345 QEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
P+ N + ++ + Y G++++ + + + D+ + + + G
Sbjct: 194 FNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITG 242
>gi|115452179|ref|NP_001049690.1| Os03g0271300 [Oryza sativa Japonica Group]
gi|113548161|dbj|BAF11604.1| Os03g0271300, partial [Oryza sativa Japonica Group]
Length = 484
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 45/416 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+ + ACA L + GR +H L L + SD + TAL+DMY KCG + A VF E+
Sbjct: 67 TALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEM-A 125
Query: 75 SR------------------------------------NILTWNTMIAGMMLNGRSEKAM 98
SR +++TWN +++G L G A
Sbjct: 126 SRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAG 185
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRF-EAFKLFEKMQSTG--MVPSLKCVTSVL 155
+L + +GF+PD TW S +SG S L ++ A LF M G ++PS ++++L
Sbjct: 186 DLVGAMKDDGFQPDVVTWTSRVSG-SVLNFQYGRARALFRAMMVAGGRVLPSSATISTIL 244
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A A+++ +K GKE HG+ + A + ++ ++++AL+ MY KCG ARR FD+ +
Sbjct: 245 PAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQR--S 302
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+MI G +G + AV +FD M ++ KP+ +F AVL+AC + G V+ ++
Sbjct: 303 TVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYR 362
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M ++G++P+ EH+ CMV LLGR+GRLDEA IR +P EP V+ +LLGAC H N
Sbjct: 363 AMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNI 422
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E A +L +EP+N ++LS+ A G+ +DV +I++++ R+L KL S
Sbjct: 423 ELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYS 478
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 127/253 (50%), Gaps = 13/253 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T +++ A A++ ++ G++VHG ++ + + + +ALVDMY KCG + A +
Sbjct: 235 PSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRL 294
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+ +TWN+MI G+ +G ++A+ LF+ + +G KPD T+ ++++ S GM
Sbjct: 295 FDKMP-QRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGM 353
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L+ MQ G+ P L+ C+ +L L E +G + L D
Sbjct: 354 VEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLD------EAYGFIRAMPLEPDRF 407
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + ++PD+ A + S G+ + +I L++
Sbjct: 408 VWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVK 467
Query: 244 QEKVKP-NSASFV 255
+ ++K +S S+V
Sbjct: 468 RRRLKKLDSYSWV 480
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLF---EKMQ--STGMV-PSLKCVTSVLSACADLSALKLG 167
++W ++ S+ G + +LF ++Q S G V P V + L ACA L+ + G
Sbjct: 22 SSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASG 81
Query: 168 KETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
+ H V+ R L D ATAL+ MY KCG + AR+ FD+ + DP WNA+++ Y
Sbjct: 82 RLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASR-GDPVVWNALLACY 140
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+G E A+ + M+ + P+ ++ V+S AG A + M DD G +P
Sbjct: 141 ARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDD-GFQP 198
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 218/384 (56%), Gaps = 12/384 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S++S C+ L +++ RQVHG+ + +++ ++ AL+D Y KCG + +F+ +
Sbjct: 214 TLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSM 273
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ ++W +M+ R + A ++F + + +W ++ISGF + G +EA
Sbjct: 274 V-EKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKY----TVSWAALISGFVKNGRCYEA 328
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR---ADLNKDESMATAL 189
++F +M G++P + SVL ACA + + GK+ H +IR +D + + AL
Sbjct: 329 LEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNAL 388
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A F+ I D WN +I+G+ +NG E ++ +FD M + ++P
Sbjct: 389 MDMYAKCGDMKSAENLFEMM-IHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEP 447
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F+ VLSAC HAG V+ L++ M+ +G+KPK H+ ++DLLGR RL+EA L
Sbjct: 448 NHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCL 507
Query: 310 IRELPEPT---VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I ++P ++++ ++LG C H N +L + A L +EPEN +V+LSNIYA G
Sbjct: 508 IEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASG 567
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D RIR ++ +R L K P S
Sbjct: 568 RWSDTNRIRNVMKERGLKKEPAFS 591
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 46/334 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F S+IS C S L+ G+ +H +K +T + L+D+Y KCGC H F +L
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
++ TWNT+++ G +A +LF+ + ++NS+ISG ++ EA
Sbjct: 141 -NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNL----VSYNSLISGLTRHEFHKEAV 195
Query: 134 KLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
K F +MQ+ G++ + S++S C+ L +K ++ HG + + ALI
Sbjct: 196 KFFREMQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALID 255
Query: 192 MYMKCGQP----------------SW---------ARRFFDQFEIKPDDP----AFWNAM 222
Y KCG+P SW A R D ++ + P W A+
Sbjct: 256 AYGKCGEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAAL 315
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM----- 277
ISG+ +NG A+E+F M +E V P + +FV+VL AC + + Q+ +
Sbjct: 316 ISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRS 375
Query: 278 -DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
D+ F + F ++D+ + G + A L
Sbjct: 376 SDNLFNVYV----FNALMDMYAKCGDMKSAENLF 405
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 24/258 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM----IGTALVDMYLKCGCLPC 64
P + TF+SV+ ACAS + G+QVH ++ + SD + + AL+DMY KCG +
Sbjct: 342 PRAQTFVSVLDACASEALIGRGKQVHCQIIR-GRSSDNLFNVYVFNALMDMYAKCGDMKS 400
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A N+F+ + +++++WNT+I G NGR E ++ +F+ + +P+ T+ ++S +
Sbjct: 401 AENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNIEPNHVTFLGVLSACN 460
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSAL--------KLGKETHGHVI 175
G+ +L + M+ G+ P ++ + L K+ E H+
Sbjct: 461 HAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHI- 519
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYES 234
+M A++ G AR+ + F ++P++ + + + Y +G +
Sbjct: 520 --------AMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAASGRWSD 571
Query: 235 AVEIFDLMQQEKVKPNSA 252
I ++M++ +K A
Sbjct: 572 TNRIRNVMKERGLKKEPA 589
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 223/386 (57%), Gaps = 11/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T + ++ C L + G+ VH K S+ ++ AL+DMY+KC L A
Sbjct: 226 EPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARK 285
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++WNT+IAG G E A +LF + D +WNS+ISG++Q G
Sbjct: 286 VFDG-PMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTR----DIVSWNSLISGYAQNG 340
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA- 186
LF +M + + P + +++SA A++ AL G+ HG ++ L K E+ +
Sbjct: 341 DYVTVKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKM-LTKIEAFSG 399
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+ALI MY KCG A F+Q I D W MI+G+ +G A+E+F +MQ E
Sbjct: 400 SALIDMYCKCGSIERAFVIFNQ--IPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAE- 456
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KPN +FV+VL+AC H+G VD+ L+IF+ M + ++P EH+GC+VDLL RSGRL +A
Sbjct: 457 TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDA 516
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+I ++P EP+ S++ ++L AC H N +L E M+L ++EPE +++LSN+YA
Sbjct: 517 IGVIEKMPMEPSRSIWGAVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATC 576
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW IR+++N R + K+ G S+
Sbjct: 577 GRWSYSDSIREVMNSRGVKKIAGCSS 602
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 158/356 (44%), Gaps = 26/356 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAHN 67
P+ TF+ ++ ++ +Q+H L S + + +L+ Y+ GC CA
Sbjct: 128 PDRQTFLYLLQTTK---FVAEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQ 184
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF---- 123
+F E+ RN++++NTMI G G +ELF + G +PD T ++
Sbjct: 185 LFDEM-SDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLLLLCGQLG 243
Query: 124 -SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++LG A +++ + +L ++L + LKL ++ V + KD
Sbjct: 244 ETKLGKSVHA-----QIEKSIGSSNLILYNALLDMYVKCNELKLARK----VFDGPMEKD 294
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+I+ Y K G+ A F+Q I D WN++ISGY +NG+Y + +F M
Sbjct: 295 TVSWNTIIAGYAKVGELELACDLFNQ--IPTRDIVSWNSLISGYAQNGDYVTVKCLFTRM 352
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRS 300
E VKP+ + V ++SA G +D+ I + + K E F ++D+ +
Sbjct: 353 FAENVKPDKVTIVNLISAVAEMGALDQGRWIHGLA---VKMLTKIEAFSGSALIDMYCKC 409
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
G ++ A + ++PE V+ + +++ H + E+ +Q N FV
Sbjct: 410 GSIERAFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQAETKPNDVTFV 465
>gi|326489701|dbj|BAK01831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 211/387 (54%), Gaps = 11/387 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ---SDTMIGTALVDMYLKCGCLPCA 65
PN VT ++V+SACA R + + + S ++ T L YL A
Sbjct: 66 PNDVTLLTVLSACAGAPSSPLARPLALSLHALAAKLFPSHLLLCTCLARFYLASRLPHLA 125
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + R+++T+NTMI G+M NG A E+F+G+ +PD +W ++I G +
Sbjct: 126 LQLFGSMT-VRSLVTYNTMITGLMRNGLVAAAREVFDGMP----EPDKVSWTALIDGCVK 180
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA F M G+ P + + +SACA++ AL LG H V R L + +
Sbjct: 181 NGRHDEAIDCFHAMLLDGVEPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRI 240
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A +LI MY +CGQ +AR+ FD + WN+MI G+ NG A+E F+ M+++
Sbjct: 241 ANSLIDMYARCGQVEFARQVFDSMRNR--TVVSWNSMIVGFAANGRCTDAIEHFEAMRRK 298
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+P++ +F VL+AC HAG D+ L+ + M + G+ + EH+GC+VDLLGR+GRL E
Sbjct: 299 GFRPDAVTFTGVLTACSHAGLTDEGLRYYKAMRAEHGITARMEHYGCVVDLLGRAGRLGE 358
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++ +P P V +LL C H + D+ E++ L E +P + +V+LSNIYA
Sbjct: 359 AMSVVATMPMRPNEVVLGALLAGCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLLSNIYAA 418
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
G+W+ G++R ++ R + K PG SA
Sbjct: 419 TGKWDGAGKVRGLMKARGVKKRPGRSA 445
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 19/281 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT ++ ISACA + L G VH L + + + I +L+DMY +CG + A
Sbjct: 200 EPDYVTLVAAISACAEVGALGLGMWVHRLVTRERLEGNIRIANSLIDMYARCGQVEFARQ 259
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +R +++WN+MI G NGR A+E FE + +GF+PD T+ +++ S G
Sbjct: 260 VFDSMR-NRTVVSWNSMIVGFAANGRCTDAIEHFEAMRRKGFRPDAVTFTGVLTACSHAG 318
Query: 128 MRFEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + ++ M++ T + CV +L A +LG E V + +E
Sbjct: 319 LTDEGLRYYKAMRAEHGITARMEHYGCVVDLLG-----RAGRLG-EAMSVVATMPMRPNE 372
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++ G A + E P + + + + Y G+++ A ++ LM
Sbjct: 373 VVLGALLAGCRMHGDVDMAEQLMQHLLEQDPGGDSNYVLLSNIYAATGKWDGAGKVRGLM 432
Query: 243 QQEKVKPNSASFVAVLSA------CGHAGHVDKALQIFTMM 277
+ VK + CG H +A ++F M+
Sbjct: 433 KARGVKKRPGRSAVEIDGDVHEFVCGDRSH-PQADEVFDML 472
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 205/373 (54%), Gaps = 14/373 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS---DTMIGTALVDMYLKCGCLPCAH 66
+SVT + VI AC+ YL V + IE + D +G +L+DMY + G + A
Sbjct: 257 DSVTMVKVILACS---YLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRRGLVDLAR 313
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ +NI++WN M+ G G A +LF + + +W MISG +Q
Sbjct: 314 RVFDRMQ-EKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIR----NVISWTCMISGCAQA 368
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A KLF++M + P V+SVLSAC+ L L G+ H ++ R D+ D +
Sbjct: 369 NQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVG 428
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG A F ++K D W +MI G NG ++ E+F M ++
Sbjct: 429 NALIDMYCKCGVVDKALEVFH--DMKKKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDG 486
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P SF+ +L AC HAG VDK L+ F M+ +GL+P+ +H+GC+VDLL RSG LD A
Sbjct: 487 LQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGELDRA 546
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E I+++P P V ++ LL AC H N L E KL E++P N +V+LSN YAG
Sbjct: 547 YEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSNTYAGS 606
Query: 366 GRWEDVGRIRQMI 378
RW+D R+R ++
Sbjct: 607 DRWDDASRMRDLM 619
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 88/158 (55%), Gaps = 5/158 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T SV+SAC+ L L G+ VH + + +SD +G AL+DMY KCG + A
Sbjct: 387 KPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDKALE 446
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++K ++ ++W +MI G+ +NG + ELF + +G +P ++ ++ + G
Sbjct: 447 VFHDMK-KKDSVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAG 505
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL 161
+ + + FE M+ G+ P +K CV +LS +L
Sbjct: 506 LVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSGEL 543
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 107/222 (48%), Gaps = 14/222 (6%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
+P +N +I G SQ EA ++ + M + G++ + AC+ + + G+
Sbjct: 118 QPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQ 177
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
H V++ + +LI MY G+ +A++ FD+ + + D WN++I GY +
Sbjct: 178 VFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDR--DLVSWNSLICGYSQ 235
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA---GHVDKALQIF--TMMDDDFGL 283
++ +++F+LM++ V +S + V V+ AC + G VD ++ +D D L
Sbjct: 236 CNRFKEVLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYL 295
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ GR G +D AR + + E + ++++L
Sbjct: 296 G------NSLIDMYGRRGLVDLARRVFDRMQEKNIVSWNAML 331
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 210/389 (53%), Gaps = 42/389 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T ++V+SACA ++ GR VH S+ I AL+D+Y K G
Sbjct: 219 RPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFG------- 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A ELF+GL + D +WN++I G++ +
Sbjct: 272 -------------------------EVETACELFDGL----WNKDVISWNTLIGGYTHMN 302
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV---IRADLNKDES 184
+ EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ ++ + S
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T+LI MY KCG A++ FD + + WNAMISG+ +G +A +IF M+
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDS-SMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
++P+ +FV +LSAC H+G +D IF M + + PK EH+GCM+DLLG SG
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFK 481
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA E+I +P EP ++ SLL AC H N +LGE A KL ++EP N +V+LSNIYA
Sbjct: 482 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYA 541
Query: 364 GLGRWEDVGRIRQMINDRQL-TKLPGISA 391
GRW +V +IR ++ND+ + K+PG S+
Sbjct: 542 AAGRWNEVAKIRALLNDKGMKKKVPGCSS 570
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 13/357 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF ++ +CA + G+Q+HG LK+ D + T+L+ MY + G L A V
Sbjct: 87 PDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKV 146
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+++++ +IAG + G E A +LF+ + + D +WN+MISG+ + G
Sbjct: 147 F-DISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGK----DVVSWNAMISGYVETGN 201
Query: 129 RFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF E M T + P + +V+SACA +++LG+ H + + +
Sbjct: 202 YKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVN 261
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI +Y K G+ A FD K D WN +I GY Y+ A+ +F M +
Sbjct: 262 ALIDLYSKFGEVETACELFDGLWNK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 319
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHF-GCMVDLLGRSGRLDE 305
PN + +++L AC H G +D I ++ G+ ++D+ + G +D
Sbjct: 320 TPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDA 379
Query: 306 ARELI-RELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
A+++ + ++S +++++ H ++ ++ M++ +EP++ T +LS
Sbjct: 380 AQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLS 436
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 161/343 (46%), Gaps = 30/343 (8%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
P A +VF ++ N+L WNTM G L+ A++L+ + G PD T+ ++
Sbjct: 39 FPYAISVFDTIQ-EPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLK 97
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
++ +R E ++ + G + TS++S A L+ ++ V ++
Sbjct: 98 SCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARK----VFDISSHR 153
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-D 240
D TALI+ Y+ G A++ FD EI D WNAMISGY G Y+ A+E+F +
Sbjct: 154 DVVSYTALIAGYVSRGYIESAQKLFD--EIPGKDVVSWNAMISGYVETGNYKEALELFKE 211
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+M V+P+ ++ V V+SAC + ++ + + ++D G + ++DL +
Sbjct: 212 MMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDH-GFASNLKIVNALIDLYSKF 270
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL 358
G ++ A EL L V +++L+G + H+N L +E + QEM E P +L
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGG-YTHMN--LYKEALLLFQEMLRSGETPNDVTML 327
Query: 359 SNIYA-------GLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
S + A +GRW I IN KL G+ ++
Sbjct: 328 SILPACAHLGAIDIGRW-----IHVYIN----KKLKGVVTNVS 361
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG---TALVDMYLKCGCLP 63
+ PN VT +S++ ACA L + GR +H K K T + T+L+DMY KCG +
Sbjct: 319 ETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDID 378
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF +R++ TWN MI+G ++GR+ A ++F + G +PD T+ ++S
Sbjct: 379 AAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSAC 438
Query: 124 SQLGMRFEAFKLFEKM 139
S GM +F M
Sbjct: 439 SHSGMLDLGRNIFRSM 454
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 218/382 (57%), Gaps = 7/382 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F +++AC LQ RQ HG L S+ ++ +++D Y KCG + A F
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ ++I W T+I+G G E A +LF + + +P +W ++I+G+ + G
Sbjct: 238 DEMT-VKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSG 292
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A LF KM + G+ P +S L A A +++L+ GKE HG++IR ++ + + ++L
Sbjct: 293 NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSL 352
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY K G + R F + K D FWN MIS ++G A+ + D M + +V+P
Sbjct: 353 IDMYSKSGSLEASERVFRICDDK-HDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V +L+AC H+G V++ L+ F M G+ P QEH+ C++DLLGR+G E
Sbjct: 412 NRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRK 471
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I E+P EP +++++LG C H N +LG++ A +L +++PE+ P+++LS+IYA G+W
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKW 531
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E V ++R ++ R++ K +S
Sbjct: 532 ELVEKLRGVMKKRRVNKEKAVS 553
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 160/316 (50%), Gaps = 19/316 (6%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
S++ C L+ G+ +H LKI K+ +T++ L+ MY+KCG A VF ++
Sbjct: 51 SLLQQCGDTKSLKQGKWIHR-HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+ +WN M++G + +G +A +F+ + D +WN+M+ G++Q G EA
Sbjct: 110 -LRNLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEAL 164
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+++ + +G+ + +L+AC L+L ++ HG V+ A + ++ ++I Y
Sbjct: 165 WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCGQ A+R FD+ +K D W +ISGY + G+ E+A ++F M ++ N S
Sbjct: 225 AKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVS 278
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL---- 309
+ A+++ G ++AL +F M G+KP+Q F + L +E+
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKM-IALGVKPEQFTFSSCLCASASIASLRHGKEIHGYM 337
Query: 310 IRELPEPTVSVYHSLL 325
IR P V SL+
Sbjct: 338 IRTNVRPNAIVISSLI 353
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 137/298 (45%), Gaps = 22/298 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P TF S + A AS+ L+ G+++HG ++ + + ++ ++L+DMY K G L
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ VF+ + + WNTMI+ + +G KA+ + + + +P+ T +++ S
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 125 QLGMRFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ E + FE M G+VP C+ +L KE +
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF------KELMRKIEEMPFE 478
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D+ + A++ + G ++ D+ ++ P+ A + + S Y +G++E ++
Sbjct: 479 PDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLR 538
Query: 240 DLMQQEKV-KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+M++ +V K + S++ ++K ++ FT+ D K+E + + +L
Sbjct: 539 GVMKKRRVNKEKAVSWI----------EIEKKVEAFTVSDGSHAHARKEEIYFILHNL 586
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 109/271 (40%), Gaps = 44/271 (16%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES-MATAL 189
+A E + G+ + S+L C D +LK GK H H+ + + ++ L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 190 ISMYMKCGQPSWARRFFDQFEIK----------------------------PD-DPAFWN 220
I MYMKCG+P A + FDQ ++ P+ D WN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
M+ GY ++G A+ + ++ +K N SF +L+AC + + LQ+
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKS----RQLQLNRQAHGQ 204
Query: 281 F---GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
G ++D + G+++ A+ E+ + ++ +L+ + LG
Sbjct: 205 VLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG-----YAKLG 259
Query: 338 E-EMAMKL-QEMEPENPTPFVILSNIYAGLG 366
+ E A KL EM +NP + L Y G
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQG 290
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 224/405 (55%), Gaps = 23/405 (5%)
Query: 3 ECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
E +SDE PN TF SV+ ACA +Q G+Q+HGL LK D + + LV MY+ C
Sbjct: 117 EMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMC 176
Query: 60 GCLPCAHNVF-------------QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
G + A +F K I+ WN MI G M G + A LF+ +
Sbjct: 177 GFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQ 236
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+WN+MISG+S G +A ++F +M+ + P+ + SVL A + L +L+L
Sbjct: 237 RSV----VSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLEL 292
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H + + + D+ + +ALI MY KCG A F++ + ++ W+AMI+G+
Sbjct: 293 GEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER--LPRENVITWSAMINGF 350
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+G+ A++ F M+Q V+P+ +++ +L+AC H G V++ + F+ M GL+P+
Sbjct: 351 AIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPR 410
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
EH+GCMVDLLGRSG LDEA E I +P +P ++ +LLGAC N ++G+ +A L
Sbjct: 411 IEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILM 470
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+M P + +V LSN+YA G W +V +R + ++ + K PG S
Sbjct: 471 DMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 115/277 (41%), Gaps = 51/277 (18%)
Query: 105 AHEGFKPDPA----TWNSMISGFSQLG--MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSA 157
AH+ F P +WN++I GFS+ A LF +M S V P+ SVL A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD--- 214
CA ++ GK+ HG ++ DE + + L+ MY+ CG AR F + I+ D
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 215 ----------------------------------------DPAFWNAMISGYGRNGEYES 234
WN MISGY NG ++
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
AVE+F M++ ++PN + V+VL A G ++ + + +D G++ ++
Sbjct: 258 AVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALI 316
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
D+ + G +++A + LP V + +++ H
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIH 353
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 200/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T ++AC + L+ G+++HG L+ + T +G+AL+ MY C L A +
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF EL D WNS+IS +Q G
Sbjct: 556 VFSELS------------------------------------TRDVVVWNSIISACAQSG 579
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A L +M + + + + S L AC+ L+AL+ GKE H +IR L+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY +CG +RR FD + D WN MIS YG +G AV +F + +
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQR--DLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGL 697
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F +LSAC H+G +++ + F MM ++ + P E + CMVDLL R+G+ +E
Sbjct: 698 KPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETL 757
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++P EP +V+ SLLGAC H N DL E A L E+EP++ +V+++NIY+ G
Sbjct: 758 EFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAG 817
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWED +IR ++ +R +TK PG S
Sbjct: 818 RWEDAAKIRCLMKERGVTKPPGCS 841
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 177/325 (54%), Gaps = 5/325 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
+PNS+T S +SAC +L L+ GR++HG +K+E+ SD ++G +LVD Y KC + A
Sbjct: 359 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 418
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F +K + ++++WN M+AG L G E+A+EL + +G +PD TWN +++GF+Q
Sbjct: 419 RKFGMIKQT-DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G A + F++M S GM P+ ++ L+AC + LKLGKE HG+V+R + +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+ALISMY C A F E+ D WN++IS ++G +A+++ M
Sbjct: 538 SALISMYSGCDSLEVACSVFS--ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+ N+ + V+ L AC + + +I + GL ++D+ GR G + ++
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKS 654
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
R + +P+ + ++ ++ H
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMH 679
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 41/339 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F V AC+ L + G+ V+ L I + ++ + +++DM++KCG + A
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+E++ +++ WN M++G G +KA++ + G KPD TWN++ISG++Q G
Sbjct: 247 FFEEIE-FKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305
Query: 128 M------------------------------------RFEAFKLFEKMQSTGMVPSLKCV 151
FEA +F KM G+ P+ +
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 152 TSVLSACADLSALKLGKETHGHVIRA-DLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
S +SAC +LS L+ G+E HG+ I+ +L+ D + +L+ Y KC ARR F
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM-- 423
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
IK D WNAM++GY G +E A+E+ M+ + ++P+ ++ +++ G A
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
L+ F M G+ P + G+ L +E+
Sbjct: 484 LEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 42/319 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ S++ C L L+ G QVH + +G+ L+++Y + GC+ A +F ++
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+ +W + ME++ GL G E
Sbjct: 152 -ERNVFSWTAI-------------MEMYCGL----------------------GDYEETI 175
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KLF M + G+ P V AC++L ++GK+ + +++ + + +++ M+
Sbjct: 176 KLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMF 235
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+KCG+ ARRFF++ E K D WN M+SGY GE++ A++ M+ VKP+ +
Sbjct: 236 IKCGRMDIARRFFEEIEFK--DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA----REL 309
+ A++S +G ++A + F M KP + ++ ++G EA R++
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353
Query: 310 IRELPEPTVSVYHSLLGAC 328
+ E +P S + AC
Sbjct: 354 VLEGVKPNSITIASAVSAC 372
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 143/305 (46%), Gaps = 36/305 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N+VT +S + AC+ L L+ G+++H ++ + I +L+DMY +CG + +
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L R++++WN MI+ ++G A+ LF+ G KP+ T+ +++S S G
Sbjct: 657 IF-DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSG 715
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F+ M++ M P+++ C+ +LS + ET + + +
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN------ETLEFIEKMPFEPNA 769
Query: 184 SMATALISMYMKCGQPS---WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ +L+ P +A R+ FE++P + M + Y G +E A +I
Sbjct: 770 AVWGSLLGACRIHCNPDLAEYAARYL--FELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 827
Query: 241 LMQQEKV-KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
LM++ V KP S++ V + L F + D L M + G+
Sbjct: 828 LMKERGVTKPPGCSWI----------EVKRKLHSFVVGDTSHPL---------MEQISGK 868
Query: 300 SGRLD 304
G+LD
Sbjct: 869 DGKLD 873
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 120 ISGFS------QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
I+GFS + G+ A L M T ++ S+L C L L+LG + H
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
++ ++ E + + L+ +Y + G ARR FD+ + + W A++ Y G+YE
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK--MSERNVFSWTAIMEMYCGLGDYE 172
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+++F LM E V+P+ F V AC + ++ M G + G +
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM-LSIGFEGNSCVKGSI 231
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC--HLNSDLGEEMAMKLQEMEPEN 351
+D+ + GR+D AR E+ V +++ ++ L MKL ++P+
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 352 PTPFVILSNIYAGLGRWEDVGR 373
T I+S YA G++E+ +
Sbjct: 292 VTWNAIISG-YAQSGQFEEASK 312
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 21/385 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF S++ AC L +G ++H +K S++ +G +L+DMY KCG + A
Sbjct: 438 EPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 496
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ N+ ME E + ++ + +WNS+ISG+
Sbjct: 497 IHSRFFQRANV----------------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 540
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M G+ P +VL CA+L++ LGK+ H VI+ +L D + +
Sbjct: 541 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICS 600
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG +R F++ + D WNAMI GY +G+ E A+++F+ M E +
Sbjct: 601 TLVDMYSKCGDLHDSRLMFEKSLRR--DFVTWNAMICGYAHHGKGEEAIQLFERMILENI 658
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+++L AC H G +DK L+ F MM D+GL P+ H+ MVD+LG+SG++ A
Sbjct: 659 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 718
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNS-DLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELIRE+P E ++ +LLG C H N+ ++ EE L ++P++ + + +LSN+YA
Sbjct: 719 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 778
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G WE V +R+ + +L K PG S
Sbjct: 779 GMWEKVSDLRRNMRGFKLKKEPGCS 803
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV+ +CA+L L+ G Q+H LK + +D ++ TA +DMY KC + A +F
Sbjct: 242 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD--- 298
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
S N LN +S AM I+G+SQ F+A
Sbjct: 299 NSEN------------LNRQSYNAM---------------------ITGYSQEEHGFKAL 325
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF ++ S+G+ ++ V ACA + L G + +G I++ L+ D +A A I MY
Sbjct: 326 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 385
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KC + A R FD E++ D WNA+I+ + +NG+ + +F M + +++P+ +
Sbjct: 386 GKCQALAEAFRVFD--EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 443
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAREL 309
F ++L AC G + ++I + + G+ GC ++D+ + G ++EA ++
Sbjct: 444 FGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSS-VGCSLIDMYSKCGMIEEAEKI 497
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 55/366 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF ++ C+ L G Q+HG+ +++ +D + +AL+DMY K
Sbjct: 135 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK--------- 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G R + +++ +F+G+ + + +W+++I+G Q
Sbjct: 186 ------GKRFV-----------------ESLRVFQGIP----EKNSVSWSAIIAGCVQNN 218
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A K F++MQ S SVL +CA LS L+LG + H H +++D D + T
Sbjct: 219 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 278
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A + MY KC A+ FD E + +NAMI+GY + A+ +F + +
Sbjct: 279 ATLDMYAKCDNMQDAQILFDNSE--NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 336
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLGRSGRL 303
+ S V AC + + LQI+ + +K C+ +D+ G+ L
Sbjct: 337 GFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQAL 391
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE-----MAMKLQEMEPENPTPFVIL 358
EA + E+ +++++ A H + G E ++M +EP+ T IL
Sbjct: 392 AEAFRVFDEMRRRDAVSWNAIIAA---HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 448
Query: 359 SNIYAG 364
G
Sbjct: 449 KACTGG 454
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 145/365 (39%), Gaps = 63/365 (17%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ V ACA + L G Q++GL +K D + A +DMY KC L A VF
Sbjct: 339 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 398
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ R+ ++WN +IA NG+ + + LF + +PD T+
Sbjct: 399 DEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG------------ 445
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
S+L AC +L G E H ++++ + + S+ +L
Sbjct: 446 -----------------------SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 481
Query: 190 ISMYMKCGQPSWAR----RFFDQFEIKPDDPAF--------------WNAMISGYGRNGE 231
I MY KCG A RFF + + WN++ISGY +
Sbjct: 482 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 541
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
E A +F M + + P+ ++ VL C + QI + + + + +
Sbjct: 542 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV---IKKELQSDVYI 598
Query: 292 C--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
C +VD+ + G L ++R + + +++++ H GEE + M
Sbjct: 599 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK---GEEAIQLFERMIL 655
Query: 350 ENPTP 354
EN P
Sbjct: 656 ENIKP 660
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 21 CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILT 80
CA L+ G+Q H + + T + L+ +Y A VF ++ R++++
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP-LRDVVS 74
Query: 81 WNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMISGFSQLGMRFEAFKLFEK 138
WN MI NG S K+ ++F+ + P D +WNSM+SG+ Q G ++ ++F
Sbjct: 75 WNKMI-----NGYS-KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 128
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G+ + +L C+ L LG + HG V+R + D A+AL+ MY K +
Sbjct: 129 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 188
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
+ R F I + W+A+I+G +N A++ F MQ+ + + + +VL
Sbjct: 189 FVESLRVFQG--IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 246
Query: 259 SACG 262
+C
Sbjct: 247 RSCA 250
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 85/215 (39%), Gaps = 31/215 (14%)
Query: 144 MVPSLKCVTSVLSA-CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
M SL+ + S CA AL+LGK+ H H+I + + L+ +Y A
Sbjct: 1 MAESLRLLHMTRSVECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSA 60
Query: 203 RRFFDQ----------------------------FEIKP-DDPAFWNAMISGYGRNGEYE 233
FD+ F + P D WN+M+SGY +NGE
Sbjct: 61 SMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESL 120
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
++E+F M +E ++ + +F +L C +QI ++ G +
Sbjct: 121 KSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV-VRVGCDTDVVAASAL 179
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+D+ + R E+ + + +PE + +++ C
Sbjct: 180 LDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC 214
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T SV+ + + + G+++HG ++ SD IG++LVDMY K + +
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 262
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L ++ D +WNS+++G+ Q G
Sbjct: 263 VFSHL------------------------------------YRRDSISWNSLVAGYVQNG 286
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +M S + P +SV+ ACA L+ L LGK+ HG+V+R ++ +A+
Sbjct: 287 RYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIAS 346
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ FD+ + D W A+I G+ +G AV +F+ M+++ V
Sbjct: 347 ALVDMYSKCGNIQAARKIFDRMNLH--DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 404
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +FVAVL+AC H G VD+A F M +GL + EH+ + DLLGR+G+L+EA
Sbjct: 405 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 464
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I ++ EPT SV+ +LL +C H N +L E++A K+ ++ EN +V++ N+YA G
Sbjct: 465 DFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNG 524
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+++ ++R + + L K P S
Sbjct: 525 RWKEMAKLRLRVRKKGLRKKPACS 548
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 162/356 (45%), Gaps = 54/356 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ F SV+ +C ++ L+FG VHG +++ D G AL++MY K + V
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV 162
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + + D ++N++I+G++Q GM
Sbjct: 163 FELMP------------------------------------RKDVVSYNTVIAGYAQSGM 186
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A ++ +M ++ + P ++SVL ++ + GKE HG+VIR ++ D + ++
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSS 246
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY K + + R F + D WN++++GY +NG Y A+ +F M KV+
Sbjct: 247 LVDMYAKSARIEDSERVFSHLYRR--DSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304
Query: 249 PNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P + +F +V+ AC H H+ K L + + G +VD+ + G + A
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRG---GFGRNIFIASALVDMYSKCGNIQAA 361
Query: 307 RELI------RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
R++ E+ + + H+L G H L EE MK Q ++P N FV
Sbjct: 362 RKIFDRMNLHDEVSWTAIIMGHALHGH--GHEAVSLFEE--MKRQGVKP-NQVAFV 412
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P W S+I F+ + A F +M+++G P SVL +C + L+ G+
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRN 229
HG ++R ++ D AL++MY K R+ FE+ P D +N +I+GY ++
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKV---FELMPRKDVVSYNTVIAGYAQS 184
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G YE A+ + M +KP++ + +VL V K +I + G+
Sbjct: 185 GMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRK-GIDSDVYI 243
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+VD+ +S R++++ + L ++SL+
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280
>gi|297851320|ref|XP_002893541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339383|gb|EFH69800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 520
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 214/363 (58%), Gaps = 10/363 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R VH +K + + D ++ TALVD Y+K G L A VF+ +K N++ +MI+G M
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDAYVKSGKLESARTVFETMK-DENVVCCTSMISGYMN 218
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLK 149
G E A E+F + D +N+M+ GFS+ + + ++ MQ P++
Sbjct: 219 QGFVEDAEEIFNTTKVK----DIVVYNAMVEGFSRSAETAKRSVDMYISMQRASFHPNIS 274
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
SV+ AC+ L+ ++G++ H ++++ + M ++L+ MY KCG ARR FDQ
Sbjct: 275 TFASVIGACSVLTCHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDARRVFDQM 334
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ K + W +MI GYG+NG E A+E+F M++ ++PN +F+ VLSAC H+G VDK
Sbjct: 335 QEK--NVFSWTSMIDGYGKNGNPEEALELFTRMKEFHIEPNYVTFLGVLSACSHSGLVDK 392
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS-VYHSLLGAC 328
+IF M D+ +KPK EH+ CMVDL+GR+G L++A E +R +PE S V+ +LL +C
Sbjct: 393 GYEIFESMQRDYSMKPKMEHYACMVDLMGRAGELNKAFEFVRAMPERHNSDVWAALLSSC 452
Query: 329 WCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
H N DL A +L ++ + P ++ LSN+YA +W++V +IR+++ R+++K
Sbjct: 453 NLHGNVDLASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKVRRISKNI 512
Query: 388 GIS 390
G S
Sbjct: 513 GRS 515
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 159/335 (47%), Gaps = 10/335 (2%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K D I L+ ++LKCGCL A VF EL + +N MI+G +
Sbjct: 53 GQKIHADIIKTGFIPDLNISIKLLILHLKCGCLSYARQVFDELPKP-TLSAYNYMISGYL 111
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G ++ + L + +++ G K D T + ++ + LG + ++ ++
Sbjct: 112 KHGFLKELLLLVQWISYSGEKADGYTLSMVLKASNSLGSNMLMPRSLCRLVHARIIKCDV 171
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA--TALISMYMKCGQPSWARRFFD 207
+ VL + +K GK + + KDE++ T++IS YM G A F+
Sbjct: 172 ELDDVLITALVDAYVKSGKLESARTVFETM-KDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEY-ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
++K D +NAM+ G+ R+ E + +V+++ MQ+ PN ++F +V+ AC
Sbjct: 231 TTKVK--DIVVYNAMVEGFSRSAETAKRSVDMYISMQRASFHPNISTFASVIGACSVLTC 288
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ Q+ + G+ + ++D+ + G +D+AR + ++ E V + S++
Sbjct: 289 HEVGQQVHAQIMKS-GVYTHIKMGSSLLDMYAKCGGIDDARRVFDQMQEKNVFSWTSMID 347
Query: 327 ACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ N + E+ +++E +EP T +LS
Sbjct: 348 GYGKNGNPEEALELFTRMKEFHIEPNYVTFLGVLS 382
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 21/255 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PN TF SVI AC+ L + G+QVH +K + +G++L+DMY KCG + A
Sbjct: 268 SFHPNISTFASVIGACSVLTCHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGIDDA 327
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF +++ +N+ +W +MI G NG E+A+ELF + +P+ T+ ++S S
Sbjct: 328 RRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFHIEPNYVTFLGVLSACSH 386
Query: 126 LGMRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSA----LKLGKETHGHVIRA 177
G+ + +++FE MQ M P ++ C+ ++ +L+ ++ E H + A
Sbjct: 387 SGLVDKGYEIFESMQRDYSMKPKMEHYACMVDLMGRAGELNKAFEFVRAMPERHNSDVWA 446
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDD-PAFWNAMISGYGRNGEYESA 235
AL+S G A + F++ D P + A+ + Y N ++++
Sbjct: 447 ----------ALLSSCNLHGNVDLASIAASELFKLNADKRPGAYLALSNVYASNDKWDNV 496
Query: 236 VEIFDLMQQEKVKPN 250
+I ++M+ ++ N
Sbjct: 497 SKIREVMKVRRISKN 511
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 24/199 (12%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ F Q+ + K + L + SA K G++ H +I+ D +++ L+ +
Sbjct: 19 YSTFPLKQNVSSLSPAKYIAGALQEHINSSAPKAGQKIHADIIKTGFIPDLNISIKLLIL 78
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
++KCG S+AR+ FD+ KP A+ N MISGY ++G + + + + K +
Sbjct: 79 HLKCGCLSYARQVFDELP-KPTLSAY-NYMISGYLKHGFLKELLLLVQWISYSGEKADGY 136
Query: 253 SFVAVLSACGHAG-------------HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
+ VL A G H + ++ +DD +VD +
Sbjct: 137 TLSMVLKASNSLGSNMLMPRSLCRLVHA-RIIKCDVELDDVL--------ITALVDAYVK 187
Query: 300 SGRLDEARELIRELPEPTV 318
SG+L+ AR + + + V
Sbjct: 188 SGKLESARTVFETMKDENV 206
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 212/383 (55%), Gaps = 8/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ TF ++ AC+S+ L+ +Q+H +K+ S+ +L+++Y K G + A +F
Sbjct: 117 NAYTFPFLLKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLF 176
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+ ++WN+MI G G E A E+F + +W SMISG G
Sbjct: 177 DQVD-QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI----ISWTSMISGCVGAGKP 231
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +MQ+ G+ + S L ACADL L GK H ++ + ++ D + L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A F + E K + W AMISGY +G A+E F MQ V+P
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEK--GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEP 349
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F +L+AC HAG V +A +F M+ G KP EH+GCMVDLLGR+G L EA EL
Sbjct: 350 NQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL 409
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P +P +++ +LL AC H N +LG+++ L +++P + ++ L++I+A G W
Sbjct: 410 IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEW 469
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
R+R+ + ++ ++KLPG S
Sbjct: 470 NQAARVRRQMKEQGVSKLPGCSV 492
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 168/400 (42%), Gaps = 84/400 (21%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL--KCGCL 62
LS E N+ + ++ C+++ L RQ+HG LK D + + L+ G L
Sbjct: 12 LSSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSL 68
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF + N WNTMI G + E+A+ L+ + + + T+
Sbjct: 69 AYARTVFDRI-FRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF------ 121
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
P L L AC+ +SAL+ ++ H H+I+ +
Sbjct: 122 -----------------------PFL------LKACSSMSALEETQQIHAHIIKMGFGSE 152
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+++Y K G AR FDQ + + D WN+MI GY + GE E A EIF+ M
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQR--DTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD------------------DFGLK 284
+ N S+ +++S C AG +AL +F M D G+
Sbjct: 211 PER----NIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 285 PK--------QEH-------FGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ ++H GC ++D+ + G L+EA E+ R++ E VSV+ +++
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 329 WCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAGL 365
H E MK+Q +EP T IL+ +AGL
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 205/347 (59%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + +++ Y + G + A N+F+++ +N ++WNTMI+G G+ ++A E+F+ +
Sbjct: 358 DVVCWNSMIAGYSRSGRMDEALNLFRQMP-IKNSVSWNTMISGYAQAGQMDRATEIFQAM 416
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ +WNS+I+GF Q + +A K M G P LSACA+L+AL
Sbjct: 417 REKNI----VSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAAL 472
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
++G + H +++++ D + ALI+MY KCG+ A + F +I+ D WN++IS
Sbjct: 473 QVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFR--DIECVDLISWNSLIS 530
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY NG A + F+ M E+V P+ +F+ +LSAC HAG ++ L IF M +DF ++
Sbjct: 531 GYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIE 590
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+ C+VDLLGR GRL+EA +R + + ++ SLLGAC H N +LG A +
Sbjct: 591 PLAEHYSCLVDLLGRVGRLEEAFNTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAER 650
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E+EP N + ++ LSN++A GRWE+V R+R ++ ++ K PG S
Sbjct: 651 LFELEPHNASNYITLSNMHAEAGRWEEVERVRMLMRGKRAGKQPGCS 697
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF +SACA+L LQ G Q+H LK +D +G AL+ MY KCG + A
Sbjct: 453 KPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQ 512
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ ++++WN++I+G LNG + KA + FE ++ E PD T+ M+S S G
Sbjct: 513 VFRDIE-CVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAG 571
Query: 128 MRFEAFKLFEKM 139
+ + +F+ M
Sbjct: 572 LANQGLDIFKCM 583
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 152/319 (47%), Gaps = 27/319 (8%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N++T+N+MI+ + N R A +LF+ ++ +WN+MI+G+ M EA +L
Sbjct: 46 KNLVTYNSMISVLAKNARIRDARQLFDQMSLRNL----VSWNTMIAGYLHNNMVEEASEL 101
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F+ M P + L KL K + D D + A+I+ Y K
Sbjct: 102 FDVM------PERDNFSWALMITCYTRKGKLEKARELLELVPD-KLDTACWNAMIAGYAK 154
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
GQ + A++ F+Q K D +N+M++GY +NG+ A++ F+ M + V S+
Sbjct: 155 KGQFNDAKKVFEQMPAK--DLVSYNSMLAGYTQNGKMHLALQFFESMTERNV----VSWN 208
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+++ +G + A Q+F + + P + M+ L + G++ EAREL +P
Sbjct: 209 LMVAGYVKSGDLSSAWQLFEKIPN-----PNAVSWVTMLCGLAKYGKMAEARELFDRMPS 263
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
V +++++ DL + A+KL ++M ++ + + N Y +G+ ++ ++
Sbjct: 264 KNVVSWNAMIAT----YVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQV 319
Query: 375 RQMINDRQLTKLPGISAGI 393
+ + +T + +G+
Sbjct: 320 YNQMPCKDITAQTALMSGL 338
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 169/394 (42%), Gaps = 66/394 (16%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEG 108
+++ + K + A +F ++ RN+++WNTMIAG + N E+A ELF+ + +
Sbjct: 52 NSMISVLAKNARIRDARQLFDQM-SLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDN 110
Query: 109 F---------------------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
F K D A WN+MI+G+++ G +A K+FE+M +
Sbjct: 111 FSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPA 170
Query: 142 TGMVP------------SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM---- 185
+V + + + + + G+V DL+ +
Sbjct: 171 KDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKI 230
Query: 186 ----ATALISM---YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
A + ++M K G+ + AR FD+ K + WNAMI+ Y ++ + + AV++
Sbjct: 231 PNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSK--NVVSWNAMIATYVQDLQVDEAVKL 288
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M + +S S+ +++ G +D+A Q++ M K M L+
Sbjct: 289 FKKMPHK----DSVSWTTIINGYIRVGKLDEARQVYNQMP----CKDITAQTALMSGLI- 339
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
++GR+DEA ++ + V ++S++ + S +E ++M +N + +
Sbjct: 340 QNGRIDEADQMFSRIGAHDVVCWNSMIAG---YSRSGRMDEALNLFRQMPIKNSVSWNTM 396
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+ YA G+ + I Q + ++ + + AG
Sbjct: 397 ISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAG 430
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 57/274 (20%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
K G + A +F + S+N+++WN MIA + + + ++A++LF+ + H+ D +W
Sbjct: 247 KYGKMAEARELFDRMP-SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHK----DSVSWT 301
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
++I+G+ ++G EA +++ +M C D++A
Sbjct: 302 TIINGYIRVGKLDEARQVYNQM-----------------PCKDITA-------------- 330
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
TAL+S ++ G+ A + F + I D WN+MI+GY R+G + A+
Sbjct: 331 --------QTALMSGLIQNGRIDEADQMFSR--IGAHDVVCWNSMIAGYSRSGRMDEALN 380
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F +Q +K NS S+ ++S AG +D+A +IF M + K + L
Sbjct: 381 LF---RQMPIK-NSVSWNTMISGYAQAGQMDRATEIFQAMRE----KNIVSWNSLIAGFL 432
Query: 298 GRSGRLDEARELI---RELPEPTVSVYHSLLGAC 328
+ LD + L+ +E +P S + L AC
Sbjct: 433 QNNLYLDALKSLVMMGKEGKKPDQSTFACTLSAC 466
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +++ F S ISACA + L GRQ+H + D IG ALV +Y +CG + A+
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYL 572
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+++ D +WN +ISGF+Q G
Sbjct: 573 EFEKIDA------------------------------------KDSISWNGLISGFAQSG 596
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K+F +M + S S +SA A+++ +K GK+ H +I+ + D ++
Sbjct: 597 YCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSN 656
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+ Y KCG ARR F + K D WNAMI+GY ++G AV +F+ M+Q
Sbjct: 657 ALITFYAKCGSIEDARREFCEMPEKND--VSWNAMITGYSQHGYGNEAVNLFEKMKQVGE 714
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +FV VLSAC H G V K L F M + GL PK H+ C+VDL+ R+G L AR
Sbjct: 715 MPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRAR 774
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I E+P EP +++ +LL AC H N ++GE A L E+EPE+ +V+LSN+YA G
Sbjct: 775 KFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSG 834
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ + RQM+ +R + K PG S
Sbjct: 835 KWDCRDQTRQMMRNRGVKKEPGRS 858
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 173/373 (46%), Gaps = 47/373 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ S++ C S+ L G Q+H +K Q + + + L+DMY K G L AH +
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ L + D +W ++ISG++Q +
Sbjct: 473 LRTLT------------------------------------EDDVVSWTALISGYAQHNL 496
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA K F++M + G+ +S +SACA + AL G++ H + ++D S+ A
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNA 556
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+S+Y +CG+ A F++ + K D WN +ISG+ ++G E A+++F M + K++
Sbjct: 557 LVSLYARCGRIKEAYLEFEKIDAK--DSISWNGLISGFAQSGYCEDALKVFAQMNRAKLE 614
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ +F + +SA + ++ + QI M+ G E ++ + G +++AR
Sbjct: 615 ASFFTFGSAVSAAANIANIKQGKQIHAMIIKR-GFDSDIEVSNALITFYAKCGSIEDARR 673
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-EPENPTPFV-ILSN------ 360
E+PE +++++ H + + K++++ E N FV +LS
Sbjct: 674 EFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGL 733
Query: 361 IYAGLGRWEDVGR 373
+ GLG +E + +
Sbjct: 734 VTKGLGYFESMSK 746
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 39/317 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P F SV+S C + G Q+H L K +T + ALV +Y + A V
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKV 270
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ D ++NS+ISG +Q G
Sbjct: 271 FSKMQS------------------------------------KDEVSFNSLISGLAQQGF 294
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF KM+ + P V S+LSACA AL G++ H +VI+A ++ D + A
Sbjct: 295 SDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGA 354
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+ C A F + ++ WN M+ +G+ + IF MQ + +
Sbjct: 355 LLDLYVNCSDIKTAHEMF--LTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI 412
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ ++L C G +D QI T + G + ++D+ + G+LD A
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHV 471
Query: 309 LIRELPEPTVSVYHSLL 325
++R L E V + +L+
Sbjct: 472 ILRTLTEDDVVSWTALI 488
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT S++SACAS L G Q+H +K SD ++ AL+D+Y+ C + AH
Sbjct: 311 KPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHE 370
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + N++ WN M+ F +L
Sbjct: 371 MFLTAQ-TENVVLWNVMLV-----------------------------------AFGKLD 394
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+F++F +MQ G++P+ S+L C + AL LG++ H VI+ + + +
Sbjct: 395 NLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCS 454
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI MY K G+ A + DD W A+ISGY ++ + A++ F M +
Sbjct: 455 VLIDMYAKHGKLDTAHVILRT--LTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGI 512
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ ++ F + +SAC +++ QI G +V L R GR+ EA
Sbjct: 513 QSDNIGFSSAISACAGIQALNQGRQIHAQSYVS-GYSEDLSIGNALVSLYARCGRIKEA 570
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 144/328 (43%), Gaps = 43/328 (13%)
Query: 4 CLSDE---PNSVTFISVISACAS-LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
C+ +E P ++F SV+ AC+ + +++ Q+H + +I L+ +Y K
Sbjct: 101 CMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKN 160
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G + A VF L D +W +M
Sbjct: 161 GLIISARKVFDNL------------------------------------CTKDSVSWVAM 184
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
ISGFSQ G EA LF +M + G+ P+ +SVLS C + +G++ H V +
Sbjct: 185 ISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGS 244
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ + + AL+++Y + A + F + + K D +N++ISG + G + A+E+F
Sbjct: 245 SLETYVCNALVTLYSRMPNFVSAEKVFSKMQSK--DEVSFNSLISGLAQQGFSDGALELF 302
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M+++ +KP+ + ++LSAC G + K Q+ + + G+ G ++DL
Sbjct: 303 TKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKA-GISSDMIVEGALLDLYVN 361
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGA 327
+ A E+ V +++ +L A
Sbjct: 362 CSDIKTAHEMFLTAQTENVVLWNVMLVA 389
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 147/355 (41%), Gaps = 46/355 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T+I ++ C + L +++HG LK+ +++++ LVD+Y G L VF
Sbjct: 9 NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ +R++ +W+ +I+G M S + ++LF + E P ++
Sbjct: 69 EDMP-NRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISF------------- 114
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDESMATA 188
SVL AC+ ++ ++ H +I L ++
Sbjct: 115 ----------------------ASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNP 152
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y K G AR+ FD K D W AMISG+ +NG E A+ +F M +
Sbjct: 153 LIGLYAKNGLIISARKVFDNLCTK--DSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIF 210
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEA 306
P F +VLS C D Q+ ++ F E + C +V L R A
Sbjct: 211 PTPYVFSSVLSGCTKIKLFDVGEQLHALV---FKYGSSLETYVCNALVTLYSRMPNFVSA 267
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
++ ++ ++SL+ SD E+ MK ++P+ T +LS
Sbjct: 268 EKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLS 322
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 151/328 (46%), Gaps = 34/328 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF S +SA A++ ++ G+Q+H + +K SD + AL+ Y KCG + A
Sbjct: 614 EASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARR 673
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ +N ++WN MI G +G +A+ LFE + G P+ T+ ++S S +G
Sbjct: 674 EFCEMP-EKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVG 732
Query: 128 MRFEAFKLFEKM-QSTGMVPS---LKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ + FE M + G+VP CV ++S LS A K +E + D
Sbjct: 733 LVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEM-------PIEPD 785
Query: 183 ESMATALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ L+S ++ +A + E++P+D A + + + Y +G+++ +
Sbjct: 786 ATIWRTLLSACTVHKNVEVGEFAAQHL--LELEPEDSATYVLLSNMYAVSGKWDCRDQTR 843
Query: 240 DLMQQEKVKPNSA-SFVAVLSACGHAGHVDKAL-----QIFTMMDDDFGLKPKQEHFGCM 293
+M+ VK S++ V ++ HA +V L +I+ + + L K G
Sbjct: 844 QMMRNRGVKKEPGRSWIEVKNSV-HAFYVGDRLHPLADKIYEFLAE---LNKKAAEIGYF 899
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVY 321
D R ++ +E +PTV ++
Sbjct: 900 QD------RYSLLNDVEQEQKDPTVYIH 921
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 103/240 (42%), Gaps = 14/240 (5%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M+ G+ + + +L C + +L K+ HG +++ + + L+ +Y G
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
+ F+ ++ W+ +ISG+ +++F M +E V P SF +VL
Sbjct: 61 LDGVVKVFE--DMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVL 118
Query: 259 SAC-GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
AC GH + A QI + GL ++ L ++G + AR++ L
Sbjct: 119 RACSGHRIGIRYAEQIHARIICH-GLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKD 177
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPEN--PTPFVILSNIYAGLGRWE--DVG 372
+ +++ + + EE A+ L EM PTP+V S++ +G + + DVG
Sbjct: 178 SVSWVAMISG----FSQNGYEEEAIHLFCEMHTAGIFPTPYV-FSSVLSGCTKIKLFDVG 232
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 205/373 (54%), Gaps = 39/373 (10%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
VI AC L L+ GR +H +TLK + LVDMY +C + AH +F ++
Sbjct: 157 VIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKM---- 212
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+K D ATW MI ++ G+ E+ F
Sbjct: 213 --------------------------------WKRDLATWTVMIGALAESGVPVESLVFF 240
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++M++ G+VP + +V+ ACA L A+ K H ++ + D + TA+I MY KC
Sbjct: 241 DRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKC 300
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G AR FD+ +++ + W+AMI+ YG +G+ E A+E+F +M + + PN +FV+
Sbjct: 301 GSVESARWIFDRMQVR--NVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVS 358
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-E 315
+L AC HAG +++ + F+ M D++G+ P +H+ CMVDLLGR+GRLDEA E+I +P E
Sbjct: 359 LLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVE 418
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
++ +LLGAC H + DL E +A L +++ + P +V+LSNIYA G+WED+ + R
Sbjct: 419 KDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTR 478
Query: 376 QMINDRQLTKLPG 388
++ L K+PG
Sbjct: 479 DLMTKGGLRKIPG 491
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 126/284 (44%), Gaps = 8/284 (2%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN+ N ++ + G E A ELF+G++ K P +W+ ++ G++++G F F +
Sbjct: 83 RNLAVANKLLYMYVERGALEDAQELFDGMS----KRHPYSWSVIVGGYAKVGNFFSCFWM 138
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F ++ +G V+ AC DL LK G+ H ++ L+ + L+ MY +
Sbjct: 139 FRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYAR 198
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
C A + F ++ D A W MI +G ++ FD M+ + + P+ + V
Sbjct: 199 CKVVEDAHQIF--VKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALV 256
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
V+ AC G ++KA I ++ G M+D+ + G ++ AR + +
Sbjct: 257 TVVYACAKLGAMNKAKAIHAYINGT-GYSLDVILGTAMIDMYAKCGSVESARWIFDRMQV 315
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFVIL 358
V + +++ A H + E+ M L+ N FV L
Sbjct: 316 RNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSL 359
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 109/238 (45%), Gaps = 6/238 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ V ++V+ ACA L + + +H D ++GTA++DMY KCG + A +
Sbjct: 250 PDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVESARWI 309
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ RN++TW+ MIA +G+ EKA+ELF + G P+ T+ S++ S G+
Sbjct: 310 FDRMQ-VRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSHAGL 368
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E + F M G+ P +K T ++ L E + + KDE +
Sbjct: 369 IEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM---IEGMPVEKDEVLWG 425
Query: 188 ALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ A R +++ P + + + Y G++E + DLM +
Sbjct: 426 ALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTK 483
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S L +C +L ++ + H + ++ ++A L+ MY++ G A+ FD +
Sbjct: 58 SSLLSCRNLFQVR---QVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKR 114
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KA 270
P W+ ++ GY + G + S +F + + + S V+ AC + +
Sbjct: 115 --HPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRL 172
Query: 271 LQIFTMMDD-DFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ T+ D+G HF C +VD+ R +++A ++ ++ + ++ + ++GA
Sbjct: 173 IHCITLKCGLDYG------HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGA 226
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 213/382 (55%), Gaps = 41/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF SV++ C ++ + VHGL +K ++ ++ ALVDMY K G + CA+ VF
Sbjct: 365 DDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVF 422
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ + D +W S+++G++Q
Sbjct: 423 EKM------------------------------------LEKDVISWTSLVTGYAQNNSH 446
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E+ K+F M+ TG+ P V S+LSACA+L+ L+ GK+ H I++ L +S+ +L
Sbjct: 447 EESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSL 506
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG A F ++K D W A+I GY +NG+ ++++ +D M +P
Sbjct: 507 VAMYAKCGCLDDADAIFVSMQVK--DVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 564
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +L AC HAG VD+ + F M+ +G+KP EH+ CM+DL GRSG+LDEA++L
Sbjct: 565 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 624
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++ +P +V+ SLL AC H N +L E A L E+EP N P+V+LSN+Y+ +W
Sbjct: 625 LDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKW 684
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
DV +IR+++ + + K PG S
Sbjct: 685 NDVAKIRKLMKSKGIVKEPGCS 706
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 165/359 (45%), Gaps = 46/359 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + T SV+ C+SL +Q G +HG +K + + + T LVDMY KC C+
Sbjct: 159 KASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCV----- 213
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+A LF+GL + + + W +M++G++Q G
Sbjct: 214 ---------------------------SEAEFLFKGLEFD--RKNHVLWTAMVTGYAQNG 244
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++A + F M + G+ + ++L+AC+ + A G++ HG ++++ + + +
Sbjct: 245 DGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQS 304
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A+ + E DD WN+++ G+ R+G E A+ +F M +
Sbjct: 305 ALVDMYAKCGDLKNAKNMLETME--DDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +F +VL+ C K++ + G + + +VD+ ++G +D A
Sbjct: 363 KIDDYTFPSVLNCCVVGSINPKSVHGLIIKT---GFENYKLVSNALVDMYAKTGDMDCAY 419
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL---QEMEPENPTPFVILSNIYA 363
+ ++ E V + SL+ + NS E ++K+ + NP F++ S + A
Sbjct: 420 TVFEKMLEKDVISWTSLVTG-YAQNNS---HEESLKIFCDMRVTGVNPDQFIVASILSA 474
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 143/301 (47%), Gaps = 10/301 (3%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMI 85
++ F R +H T L++ K G + A +F ++ ++ +WNTMI
Sbjct: 47 FMAFLRSIH--TTTAASYESIYQTNQLLNQLSKSGQVNDARKLFDKMP-QKDEYSWNTMI 103
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
+ + GR +A ELF+G + + TW+S+ISG+ + G + EAF LF M+ G
Sbjct: 104 SSYVNVGRLVEARELFDGCSCKS----SITWSSIISGYCKFGCKVEAFDLFRSMRLEGWK 159
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
S + SVL C+ L ++ G+ HG V++ + + T L+ MY KC S A
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFL 219
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
F E + W AM++GY +NG+ AVE F M + V+ N +F +L+AC
Sbjct: 220 FKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279
Query: 266 HVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
Q+ ++ FG + +VD+ + G L A+ ++ + + V ++SL
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQ--SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSL 337
Query: 325 L 325
+
Sbjct: 338 M 338
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 36/217 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ S++SACA L L+FG+QVH +K + + +LV MY KCGCL A +
Sbjct: 463 PDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAI 522
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ ++++TW +I G NG+ +++ ++ + G +PD T+ ++ S G+
Sbjct: 523 FVSMQ-VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGL 581
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E K F++M + +K G E +
Sbjct: 582 VDEGRKYFQQMNK-------------------VYGIKPGPEHYA---------------C 607
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
+I ++ + G+ A++ DQ ++KP D W +++S
Sbjct: 608 MIDLFGRSGKLDEAKQLLDQMDVKP-DATVWKSLLSA 643
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 216/385 (56%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSVT +S + ACA L+ G+++H + + + D + TAL+DMY+KC C
Sbjct: 304 EPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSC------ 357
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++A++LF+ L K D +W +++SG++Q G
Sbjct: 358 --------------------------PDEAVDLFQRLP----KKDVVSWVALLSGYAQNG 387
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M +++ +F M S G+ P V +L+A ++L + HG+V+R+ N + +
Sbjct: 388 MAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGA 447
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-QQEK 246
+LI +Y KCG A + F ++ D W++MI+ YG +G A+EIFD M +
Sbjct: 448 SLIELYSKCGSLGDAVKLFKGMIVR--DVVIWSSMIAAYGIHGRGGEALEIFDQMVKNST 505
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN+ +F+++LSAC HAG V++ L+IF M D+ L+P EHFG MVDLLGR G+L +A
Sbjct: 506 VRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKA 565
Query: 307 RELIRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
++I +P P V+ +LLGAC H N ++GE A L ++P + +++LSNIYA
Sbjct: 566 MDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYILLSNIYAVD 625
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+W++V +R I +R L K+ G S
Sbjct: 626 GKWDNVAELRTRIKERGLKKMFGQS 650
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 204/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F + +CA L LQ G+ +H + +D + ALVDMY KCG + A
Sbjct: 815 KPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARL 874
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +W SMISG++ G
Sbjct: 875 VFDKMA------------------------------------VRDLVSWTSMISGYAHNG 898
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F+ M+S+G++P+ + SVL AC +L AL+ G+ H +VI+ D +AT
Sbjct: 899 YNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVAT 958
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG AR FD E D W+AMI+ YG +G A+++FD M + V
Sbjct: 959 AIMDMYSKCGSLDLARCLFD--ETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGV 1016
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F VLSAC H+G +++ F +M ++F + K ++ CMVDLLGR+G+L EA
Sbjct: 1017 RPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAV 1076
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P EP S++ SLLGAC H N DL E++A L ++P + V+LSNIYA
Sbjct: 1077 DLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKS 1136
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW +V ++R+M+ R K+ G S
Sbjct: 1137 RWNEVEKVRKMMARRGANKIQGFS 1160
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 175/387 (45%), Gaps = 46/387 (11%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M +C+ +P VT +SV+SACA LL ++ G VHGL ++ E D + +L+++Y K G
Sbjct: 198 MMDCVVLDP--VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C A N+F ++ + D +W++MI
Sbjct: 256 CEKIAANLFSKMP------------------------------------EKDVISWSTMI 279
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ ++ EA LF +M P+ V S L ACA L+ GK+ H +
Sbjct: 280 ACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE 339
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S++TALI MYMKC P A F + K D W A++SGY +NG ++ +F
Sbjct: 340 LDFSVSTALIDMYMKCSCPDEAVDLFQRLPKK--DVVSWVALLSGYAQNGMAYKSMGVFR 397
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + ++P++ + V +L+A G +AL + + G +++L +
Sbjct: 398 NMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS-GFNSNVFVGASLIELYSKC 456
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM---AMKLQEMEPENPTPFVI 357
G L +A +L + + V ++ S++ A H E+ +K + P N T I
Sbjct: 457 GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSI 516
Query: 358 LSNI-YAGLGRWEDVGRIRQMINDRQL 383
LS +AGL E + +M++D QL
Sbjct: 517 LSACSHAGLVE-EGLKIFDRMVHDYQL 542
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 51/326 (15%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPCA 65
+ P++ T + ACA L L+ G+ +HG K E SD +G+ALV++Y KCG + A
Sbjct: 99 EAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEA 158
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATWNSMISGFS 124
VF+E + +L W +M+ G N E+A+ LF + + DP T
Sbjct: 159 LKVFEEFQRPDTVL-WTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVT--------- 208
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ SV+SACA L +K G HG VIR + + D
Sbjct: 209 --------------------------LVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +L+++Y K G A F + K D W+ MI+ Y N A+ +F M +
Sbjct: 243 LVNSLLNLYAKTGCEKIAANLFSKMPEK--DVISWSTMIACYANNEAANEALNLFHEMIE 300
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTM-----MDDDFGLKPKQEHFGCMVDLLGR 299
++ +PNS + V+ L AC + ++++ +I + + DF + ++D+ +
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVST------ALIDMYMK 354
Query: 300 SGRLDEARELIRELPEPTVSVYHSLL 325
DEA +L + LP+ V + +LL
Sbjct: 355 CSCPDEAVDLFQRLPKKDVVSWVALL 380
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 11/241 (4%)
Query: 93 RSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
R + A +FE + P+P + WN MI GF+ G + +L+ KM G+ P
Sbjct: 767 RIDAASIVFEDI------PNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFA 820
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
L +CA LS L+ GK H H++ + D + AL+ MY KCG AR FD+
Sbjct: 821 FPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMA 880
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
++ D W +MISGY NG + FDLM+ V PN S ++VL ACG+ G + K
Sbjct: 881 VR--DLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKG 938
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
+ F G + ++D+ + G LD AR L E + + +++ +
Sbjct: 939 -EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGI 997
Query: 331 H 331
H
Sbjct: 998 H 998
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 138/344 (40%), Gaps = 61/344 (17%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
Q+H K DT T L +Y KC L A VF E
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDE-------------------- 61
Query: 92 GRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRFEAFKLFEKMQST-GMVPSL 148
P P WNS + + + E +LF M T G P
Sbjct: 62 ------------------TPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDN 103
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFD 207
+ L ACA L L+LGK HG + D + D + +AL+ +Y KCGQ A + F+
Sbjct: 104 FTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFE 163
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGH--- 263
+F+ +P D W +M++GY +N + E A+ +F M + V + + V+V+SAC
Sbjct: 164 EFQ-RP-DTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLN 221
Query: 264 --AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
AG L I D D L +++L ++G A L ++PE V +
Sbjct: 222 VKAGSCVHGLVIRREFDGDLPL------VNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 275
Query: 322 HSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA 363
+++ C+ N++ E EM + P ++S + A
Sbjct: 276 STMIA---CYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQA 316
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 205/343 (59%), Gaps = 9/343 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
T+++ Y++ G + A +F E+ + ++ N MI+G+ G KA +F+ +
Sbjct: 238 TSMLMGYVQNGRIEDAEELF-EVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER-- 294
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ A+W ++I + G EA LF MQ G+ P+ + S+LS CA L++L GK+
Sbjct: 295 --NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQ 352
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++R + D +A+ L++MY+KCG+ ++ FD+F K D WN++ISGY +
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK--DIIMWNSIISGYASH 410
Query: 230 GEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G E A+++F ++ KPN +FVA LSAC +AG V++ L+I+ M+ FG+KP
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 289 HFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
H+ CMVD+LGR+GR +EA E+I + EP +V+ SLLGAC H D+ E A KL E+
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEI 530
Query: 348 EPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
EPEN +++LSN+YA GRW DV +R+++ R + K PG S
Sbjct: 531 EPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 15/247 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T IS++S CASL L G+QVH ++ + D + + L+ MY+KCG L + +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQLG 127
F S++I+ WN++I+G +G E+A+++F + G KP+ T+ + +S S G
Sbjct: 389 FDRFP-SKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK-----ETHGHVIRADLNKD 182
M E K++E M+S V +K +T+ + D+ LG+ E + + D
Sbjct: 448 MVEEGLKIYESMES---VFGVKPITAHYACMVDM----LGRAGRFNEAMEMIDSMTVEPD 500
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
++ +L+ Q A + EI+P++ + + + Y G + E+ L
Sbjct: 501 AAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKL 560
Query: 242 MQQEKVK 248
M+ V+
Sbjct: 561 MKTRLVR 567
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 36/302 (11%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ RNI++WN +++G M NG ++A ++F+ + +W +++ G+
Sbjct: 67 ARKLFDEMP-DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYV 121
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G A LF KM V + L A KL + +KD
Sbjct: 122 HNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIP--------DKDNI 173
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
T++I K G+ AR FD E+ W M++GYG+N + A +IFD+M +
Sbjct: 174 ARTSMIHGLCKEGRVDEAREIFD--EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPE 231
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGR 302
+ S+ ++L G ++ A ++F +M P + C M+ LG+ G
Sbjct: 232 K----TEVSWTSMLMGYVQNGRIEDAEELFEVM-------PVKPVIACNAMISGLGQKGE 280
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE-----MAMKLQEMEPENPTPFVI 357
+ +AR + + E + + +++ H + E + M+ Q + P PT I
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIK---IHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 358 LS 359
LS
Sbjct: 338 LS 339
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
P T N I+ S++G EA KLF+ S + V + A KL E
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGE 231
I + L+S YMK G+ AR+ FD + P+ + W A++ GY NG+
Sbjct: 77 RNIIS--------WNGLVSGYMKNGEIDEARKVFD---LMPERNVVSWTALVKGYVHNGK 125
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ A +F M ++ N S+ +L G +D A +++ M+ D +
Sbjct: 126 VDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTS---- 177
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
M+ L + GR+DEARE+ E+ E +V + +++
Sbjct: 178 -MIHGLCKEGRVDEAREIFDEMSERSVITWTTMV 210
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 210/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN++T++S+++ACAS L++ ++VH L + D +GTALV MY K G + A
Sbjct: 227 KPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARV 286
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K D +WN MI F++ G
Sbjct: 287 VFDRMK------------------------------------VRDVVSWNVMIGAFAEHG 310
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA+ LF +MQ+ G P S+L+ACA AL+ K+ H H + + L D + T
Sbjct: 311 RGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGT 370
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K G AR FD+ +++ + WNAMISG ++G + A+E+F M V
Sbjct: 371 ALVHMYSKSGSIDDARVVFDRMKVR--NVVSWNAMISGLAQHGLGQDALEVFRRMTAHGV 428
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +FVAVLSAC HAG VD+ + M +G++P H CMVDLLGR+GRL EA+
Sbjct: 429 KPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAK 488
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I + +P + + +LLG+C + N +LGE +A + +++P+N +V+LSNIYA G
Sbjct: 489 LFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAG 548
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V +R M+ +R + K PG S
Sbjct: 549 KWDMVSWVRTMMRERGIRKEPGRS 572
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 184/390 (47%), Gaps = 49/390 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T++ ++ ACASL L++G++VH +SD +GTAL+ MY KCG + A
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L + +I++W MI +G ++A L + EGFKP+ T+
Sbjct: 186 IFDNLM-NHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITY----------- 233
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
S+L+ACA ALK K H H + A L D + T
Sbjct: 234 ------------------------VSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K G AR FD+ +++ D WN MI + +G A ++F MQ E
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVR--DVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGC 327
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP++ F+++L+AC AG ++ +I D GL+ +V + +SG +D+AR
Sbjct: 328 KPDAIMFLSILNACASAGALEWVKKIHRHALDS-GLEVDVRVGTALVHMYSKSGSIDDAR 386
Query: 308 ELIRELPEPTVSVYHSLLGACWCH-LNSDLGEEM-AMKLQEMEPENPTPFVILSNI-YAG 364
+ + V +++++ H L D E M ++P+ T +LS +AG
Sbjct: 387 VVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAG 446
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
L D GR + + +T++ GI ++
Sbjct: 447 L---VDEGRSQYL----AMTQVYGIEPDVS 469
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 166/376 (44%), Gaps = 42/376 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S ++ V+ C L +QVH +K + + + L+ +Y++CG L A VF
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L K A+WN+MI+G+ +
Sbjct: 87 DAL------------------------------------VKKSGASWNAMIAGYVEHKHA 110
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LF +M G+ P+ +L ACA LSALK GKE H + L D + TAL
Sbjct: 111 EDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTAL 170
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG + ARR FD + D W MI Y ++G + A + M+QE KP
Sbjct: 171 LRMYGKCGSINEARRIFDN--LMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKP 228
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ ++V++L+AC G + K ++ D GL+ +V + +SG +D+AR +
Sbjct: 229 NAITYVSILNACASEGAL-KWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVV 287
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS--NIYAGLGR 367
+ V ++ ++GA H ++ +++Q E P + LS N A G
Sbjct: 288 FDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQ-TEGCKPDAIMFLSILNACASAGA 346
Query: 368 WEDVGRIRQMINDRQL 383
E V +I + D L
Sbjct: 347 LEWVKKIHRHALDSGL 362
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 10/250 (4%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
EA + G++ VL C L K+ H +I++ + ++ + L+
Sbjct: 11 EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLL 70
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+Y++CG+ AR FD K A WNAMI+GY + E A+ +F M E V+PN
Sbjct: 71 HVYIECGRLQEARCVFDALVKKS--GASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ +++ +L AC + ++ + GL+ ++ + G+ G ++EAR +
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHG-GLESDVRVGTALLRMYGKCGSINEARRIF 187
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE----NPTPFVILSNIYAGLG 366
L + + ++GA + S G+E + +ME E N +V + N A G
Sbjct: 188 DNLMNHDIISWTVMIGA---YAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 367 RWEDVGRIRQ 376
+ V R+ +
Sbjct: 245 ALKWVKRVHR 254
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 206/347 (59%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + +++ Y G + A +F E+ RN+++WN+M+AG + G E A LF +
Sbjct: 291 DVISWNTMINGYAIVGKIDEAKRLFDEMP-ERNLVSWNSMLAGFVKCGNVEDAFGLFSEM 349
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
D +WNSM++ ++Q G EA LF++M++ G+ P+ V S+LSACA L AL
Sbjct: 350 PCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 405
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G H ++ + + + TAL+ MY KCG+ S A + F+ E K D WN +I+
Sbjct: 406 DKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK--DVLAWNTIIA 463
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +G + A ++F M++ V+PN +FVA+LSAC HAG VD+ ++ M +G++
Sbjct: 464 GMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIE 523
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
PK EH+GC++DLL R+G L+EA ELI +P EP S +LLG C H N +LGE + +
Sbjct: 524 PKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKR 583
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L ++P + +++LSNIYA +W+D ++R ++ ++K+PG+S
Sbjct: 584 LINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVS 630
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T +S++SACA L L G +H + ++++GTALVDMY KCG + A
Sbjct: 386 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 445
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ S+++L WNT+IAGM ++G ++A +LF+ + G +P+ T+ +++S S G
Sbjct: 446 VFNAME-SKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAG 504
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLS 156
M E KL + M S+ G+ P ++ CV +L+
Sbjct: 505 MVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLA 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 16/281 (5%)
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
H P P+ +NS+I S EA L+ M +G+ P V+ AC + S
Sbjct: 153 HHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTW 212
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G H HV+++ D + ++LI +Y A++ F+ + D WNAMI G
Sbjct: 213 FGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSAR--DVVSWNAMIDG 270
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y ++ E A +FD M V S+ +++ G +D+A ++F M + +
Sbjct: 271 YVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVS- 325
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL---NSDLGEEMAM 342
+ M+ + G +++A L E+P V ++S+L AC+ N L M
Sbjct: 326 ----WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSML-ACYAQCGKPNEALALFDQM 380
Query: 343 KLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
+ ++P T +LS A LG + + IND ++
Sbjct: 381 RAVGVKPTEATVVSLLSAC-AHLGALDKGLHLHTYINDNRI 420
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 171/417 (41%), Gaps = 70/417 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L++ P++ +S+ + C +L +L +QVH +I ++ + + P
Sbjct: 90 LTNPPSNPQILSLFNPCKTLRHL---KQVHA---QIITHHNSPFQLSALASLSALSPFPT 143
Query: 65 ----AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A +F L+ L +N++I + + +A+ L+ + G KPD T+ +I
Sbjct: 144 FLAYAKTIFHHLQNPPPSL-YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVI 202
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE----------- 169
++ + + + + +G V+S++ A+ L K+
Sbjct: 203 KACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVV 262
Query: 170 -----THGHVIRADLN-----------KDESMATALISMYMKCGQPSWARRFFDQF---- 209
G+V ++ +D +I+ Y G+ A+R FD+
Sbjct: 263 SWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAIVGKIDEAKRLFDEMPERN 322
Query: 210 -------------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
E+ D WN+M++ Y + G+ A+ +FD M+
Sbjct: 323 LVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA 382
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP A+ V++LSAC H G +DK L + T ++D+ ++ +VD+ + G++
Sbjct: 383 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN-RIEVNSIVGTALVDMYAKCGKIS 441
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
A ++ + V +++++ H N +++ +++E +EP + T ILS
Sbjct: 442 LATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILS 498
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 213/386 (55%), Gaps = 12/386 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD----TMIGTALVDMYLKCGCLPCA 65
+ +T+ ++ISACA++ Q G+Q+H LK E + + AL+ +Y K + A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + RNI+TWN +++G + GR E+A FE + + T MISG +Q
Sbjct: 348 RKIFYAMP-VRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL----LTLTVMISGLAQ 402
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E KLF++M+ G P L+AC+ L AL+ G++ H ++ S+
Sbjct: 403 NGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSV 462
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A+ISMY KCG A F + D WN+MI+ G++G A+E+FD M +E
Sbjct: 463 GNAMISMYAKCGVVEAAESVF--VTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKE 520
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ +F+ VL+AC HAG V+K F M + +G+ P ++H+ MVDL R+G
Sbjct: 521 GVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSY 580
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR +I +P +P V+ +LL C H N DLG E A +L ++ P+N +V+LSNIYA
Sbjct: 581 ARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYAD 640
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+GRW DV ++R+++ D+ + K P S
Sbjct: 641 VGRWNDVAKVRKLMRDQAVRKEPACS 666
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 30/322 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS----DTMIGTALVDMYLK----- 58
P+ TF SV+SA +L++ +Q + + K + + AL+ +Y+K
Sbjct: 144 RPDDFTFTSVLSAL--VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 59 ---CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
C + A +F E+ R+ LTW TMI G + N A E+FE + A
Sbjct: 202 GIPCSAMVSARKLFDEMP-KRDELTWTTMITGYVRNDDLNGAREVFEAMVENL----GAA 256
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+MISG+ G EA L KM+ G+ T+++SACA++ + ++GK+ H +++
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYIL 316
Query: 176 RADLNKDE----SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ +LN + S++ ALI++Y K + AR+ F ++ + WNA++SGY G
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGR 374
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
E A F+ M + N + ++S G D+ L++F M D G +P F
Sbjct: 375 MEEAKSFFEEMPVK----NLLTLTVMISGLAQNGFGDEGLKLFKQMRLD-GFEPCDFAFA 429
Query: 292 CMVDLLGRSGRLDEARELIREL 313
+ G L+ R+L +L
Sbjct: 430 GALTACSVLGALENGRQLHAQL 451
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 47/277 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F ++AC+ L L+ GRQ+H + + +S +G A++ MY KCG + A +
Sbjct: 422 EPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAES 481
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + S ++++WN+MIA + +G KA+ELF+ + EG PD T+ ++++ S G
Sbjct: 482 VFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ + F M +S G+ P C D H R
Sbjct: 541 LVEKGRHYFNSMLESYGITP-----------CED------------HYAR---------- 567
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----YESAVEIFDLM 242
++ ++ + G S+AR D KP P W A+++G +G E+A ++F LM
Sbjct: 568 --MVDLFCRAGMFSYARIVIDSMPSKPGAPV-WEALLAGCRIHGNMDLGIEAAEQLFKLM 624
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q N ++V + + G + ++ +M D
Sbjct: 625 PQ-----NDGTYVLLSNIYADVGRWNDVAKVRKLMRD 656
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 158/342 (46%), Gaps = 36/342 (10%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
D + T L+ Y G L +F R+ + +N MI G NG A+ELF
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 104 LAHEGFKPDPATWNSMISGFSQ-LGMRFEAFKLFEKMQSTGMVPSLKCV-TSVLSACADL 161
+ + F+PD T+ S++S +G + ++ + TGM CV +SVL+A +
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGM----GCVSSSVLNALLSV 193
Query: 162 ---SALKLGKETHGHVIRADL-----NKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
A +LG V L +DE T +I+ Y++ + AR F+ +
Sbjct: 194 YVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA--MVE 251
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKAL 271
+ A WNAMISGY G ++ A+ + M+ ++ + ++ ++SAC + G + K +
Sbjct: 252 NLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQM 311
Query: 272 QIFTMMDDDFGLKPKQEHFGC------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + ++ L P H C ++ L ++ ++DEAR++ +P + ++++L
Sbjct: 312 HAYILKNE---LNPN--HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAIL 366
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++N+ EE +EM +N + L+ + +GL +
Sbjct: 367 SG---YVNAGRMEEAKSFFEEMPVKN---LLTLTVMISGLAQ 402
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
N D T LI+ Y G R F+ + D F+NAMI+GY NG+ SA+E+F
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135
Query: 240 DLMQQEKVKPNSASFVAVLSA 260
M+++ +P+ +F +VLSA
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSA 156
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 214/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS+T ++V+ ACA + L+ G+Q+H +++ D I AL+DMY KCG L A N+
Sbjct: 420 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 479
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ RSEK D ++N++I G+SQ
Sbjct: 480 FE----------------------RSEK---------------DDVSYNTLILGYSQSPW 502
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FE+ LF++M+S G+ LSAC +LS K GKE H ++R L+ ++ +
Sbjct: 503 CFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNS 562
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G A + F++ I D A WN MI GYG +G+ + A E+F+LM+ + +
Sbjct: 563 LLDLYTKGGMLVTASKIFNK--ITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLD 620
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVL+AC H G VDK + F+ M ++P+Q H+ CMVDLLGR+G+L + E
Sbjct: 621 YDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAE 679
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+IR++P P S V+ +LLGAC H N +L + A L E++PE+ + ++ N+YA GR
Sbjct: 680 IIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGR 739
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + +IR+++ R++ K P S
Sbjct: 740 WNEANKIRKLMKSRKVQKNPAYS 762
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S+T S++ A L GR+VHG ++K D + +LVDMY K G L A +
Sbjct: 319 PGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTI 378
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++K RN+++ WN+MI+ Q G
Sbjct: 379 FEQMK-DRNVVS-----------------------------------WNAMIANLVQNGA 402
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+L MQ +G P+ + +VL ACA +++LK+GK+ H IR L D ++ A
Sbjct: 403 ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNA 462
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ S AR F++ E D +N +I GY ++ ++ +F M+ +
Sbjct: 463 LIDMYSKCGQLSLARNIFERSE---KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGID 519
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
++ SF+ LSAC + +I ++ L ++DL + G L A +
Sbjct: 520 YDAVSFMGALSACTNLSVFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGMLVTASK 578
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+ ++ + V+ +++++ H D+ E+
Sbjct: 579 IFNKITKKDVASWNTMILGYGMHGQIDIAFEL 610
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 42/324 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +SV+ AC + +FG +H L +K+ + + ALVDMY K G +
Sbjct: 219 NVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDV------- 271
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E +M++F+G+ + + +WNS I F G
Sbjct: 272 -------------------------EASMQVFDGM----LEQNEVSWNSAIGCFLNAGFY 302
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ ++F KM ++P ++S+L A +L + LG+E HG+ I+ ++ D +A +L
Sbjct: 303 GDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSL 362
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY K G A F+Q +K + WNAMI+ +NG A + MQ+ P
Sbjct: 363 VDMYAKFGSLEKASTIFEQ--MKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECP 420
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS + V VL AC + QI GL ++D+ + G+L AR +
Sbjct: 421 NSITLVNVLPACARMASLKMGKQIHA-WSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 479
Query: 310 IRELPEPTVSVYHSLLG---ACWC 330
+ VS +LG + WC
Sbjct: 480 FERSEKDDVSYNTLILGYSQSPWC 503
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 111/255 (43%), Gaps = 17/255 (6%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++ T NT++A G++ A +F+ + D +WNS++S F GM +A +
Sbjct: 153 DVFTGNTLVAFYAACGKACDARRVFDEMPER----DVVSWNSLVSAFLVNGMFHDARRAL 208
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M +G ++ + SV+ AC K G H ++ LN ++A AL+ MY K
Sbjct: 209 VSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKF 268
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G + + FD + + WN+ I + G Y + +F M + V P S + +
Sbjct: 269 GDVEASMQVFDG--MLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSS 326
Query: 257 VLSACGHAGHVD-----KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+L A G D I MD D + +VD+ + G L++A +
Sbjct: 327 LLPALVELGSFDLGREVHGYSIKRAMDLDIFVA------NSLVDMYAKFGSLEKASTIFE 380
Query: 312 ELPEPTVSVYHSLLG 326
++ + V +++++
Sbjct: 381 QMKDRNVVSWNAMIA 395
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G E H +R D L++ Y CG+ ARR FD E+ D WN+++S +
Sbjct: 138 GLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFD--EMPERDVVSWNSLVSAF 195
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
NG + A M + N AS V+V+ ACG L I + GL
Sbjct: 196 LVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALA-VKVGLNTM 254
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+VD+ G+ G ++ + ++ + E ++S +G C LN+ ++ ++
Sbjct: 255 VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIG---CFLNAGFYGDVLRMFRK 311
Query: 347 MEPENPTP 354
M N P
Sbjct: 312 MSEHNVMP 319
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 220/384 (57%), Gaps = 9/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ S++ AC S L L+ GR+VH LK+ S+ ++ ++++Y KCG L A V
Sbjct: 145 PDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRV 204
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ +++ MI+ G E+A +F + + D W +MI GF +
Sbjct: 205 FEEM--PEDVVASTVMISSYSDQGLVEEAGAVFSRVR----RKDTVCWTAMIDGFVRNEE 258
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A + F MQ + P+ + VLSAC+ L AL++G+ H ++ + ++ + + A
Sbjct: 259 MNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA 318
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY +CG A+ FD E+K D +N MISG NG+ A+E+F +M +++
Sbjct: 319 LINMYSRCGSIDEAQTVFD--EMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLR 376
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P + +FV VL+AC H G VD +IF M D+G++P+ EH+GCMVDLLGR GRL+EA +
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYD 436
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR + P + +LL AC H N +LGE++A L++ + +V+LS++YA G+
Sbjct: 437 LIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGK 496
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W++ ++R + + + K PG S+
Sbjct: 497 WKEAAQVRAKMKEAGMQKEPGCSS 520
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 46/333 (13%)
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-----------AHEGFK----PDPATW 116
L+ S++I + A ++ NG S+ +FE L A F+ P+ +
Sbjct: 56 LQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLY 115
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
++I GF G F+A +L+ +M ++P + S+L AC AL+ G+E H ++
Sbjct: 116 TALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALK 175
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQF--------------------------- 209
L+ + + ++ +Y KCG+ ARR F++
Sbjct: 176 LGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVF 235
Query: 210 -EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
++ D W AMI G+ RN E A+E F MQ E V+PN + V VLSAC G ++
Sbjct: 236 SRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE 295
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ + M F ++ ++++ R G +DEA+ + E+ + V Y++++
Sbjct: 296 IGRWVHSYM-RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354
Query: 329 WCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
+ S E+ M + + P N T +L+
Sbjct: 355 SMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLN 387
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 210/385 (54%), Gaps = 21/385 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF S++ AC L +G ++H +K S++ +G +L+DMY KCG + A
Sbjct: 480 EPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK 538
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ N+ ME E + ++ + +WNS+ISG+
Sbjct: 539 IHSRFFQRANV----------------SGTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M G+ P +VL CA+L++ LGK+ H VI+ +L D + +
Sbjct: 583 QSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICS 642
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG +R F++ + D WNAMI GY +G+ E A+++F+ M E +
Sbjct: 643 TLVDMYSKCGDLHDSRLMFEKSLRR--DFVTWNAMICGYAHHGKGEEAIQLFERMILENI 700
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+++L AC H G +DK L+ F MM D+GL P+ H+ MVD+LG+SG++ A
Sbjct: 701 KPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRAL 760
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNS-DLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELIRE+P E ++ +LLG C H N+ ++ EE L ++P++ + + +LSN+YA
Sbjct: 761 ELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADA 820
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G WE V +R+ + +L K PG S
Sbjct: 821 GMWEKVSDLRRNMRGFKLKKEPGCS 845
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 145/297 (48%), Gaps = 42/297 (14%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV+ +CA+L L+ G Q+H LK + +D ++ TA +DMY KC + A +F
Sbjct: 284 YASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD--- 340
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
S N LN +S AM I+G+SQ F+A
Sbjct: 341 NSEN------------LNRQSYNAM---------------------ITGYSQEEHGFKAL 367
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF ++ S+G+ ++ V ACA + L G + +G I++ L+ D +A A I MY
Sbjct: 368 LLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMY 427
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KC + A R FD E++ D WNA+I+ + +NG+ + +F M + +++P+ +
Sbjct: 428 GKCQALAEAFRVFD--EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFT 485
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAREL 309
F ++L AC G + ++I + + G+ GC ++D+ + G ++EA ++
Sbjct: 486 FGSILKACT-GGSLGYGMEIHSSIVKS-GMASNSS-VGCSLIDMYSKCGMIEEAEKI 539
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 55/366 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF ++ C+ L G Q+HG+ +++ +D + +AL+DMY K
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK--------- 227
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G R + +++ +F+G+ + + +W+++I+G Q
Sbjct: 228 ------GKRFV-----------------ESLRVFQGIP----EKNSVSWSAIIAGCVQNN 260
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A K F++MQ S SVL +CA LS L+LG + H H +++D D + T
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A + MY KC A+ FD E + +NAMI+GY + A+ +F + +
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSE--NLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLGRSGRL 303
+ S V AC + + LQI+ + +K C+ +D+ G+ L
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDMYGKCQAL 433
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE-----MAMKLQEMEPENPTPFVIL 358
EA + E+ +++++ A H + G E ++M +EP+ T IL
Sbjct: 434 AEAFRVFDEMRRRDAVSWNAIIAA---HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL 490
Query: 359 SNIYAG 364
G
Sbjct: 491 KACTGG 496
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 145/365 (39%), Gaps = 63/365 (17%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ V ACA + L G Q++GL +K D + A +DMY KC L A VF
Sbjct: 381 DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVF 440
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ R+ ++WN +IA NG+ + + LF + +PD T+
Sbjct: 441 DEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFG------------ 487
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
S+L AC +L G E H ++++ + + S+ +L
Sbjct: 488 -----------------------SILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSL 523
Query: 190 ISMYMKCGQPSWAR----RFFDQFEIKPDDPAF--------------WNAMISGYGRNGE 231
I MY KCG A RFF + + WN++ISGY +
Sbjct: 524 IDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQ 583
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
E A +F M + + P+ ++ VL C + QI + + + + +
Sbjct: 584 SEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV---IKKELQSDVYI 640
Query: 292 C--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
C +VD+ + G L ++R + + +++++ H GEE + M
Sbjct: 641 CSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHH---GKGEEAIQLFERMIL 697
Query: 350 ENPTP 354
EN P
Sbjct: 698 ENIKP 702
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 14/261 (5%)
Query: 7 DEPNSVT---FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
++ NSV+ F V CA L+ G+Q H + + T + L+ +Y
Sbjct: 41 NQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFV 100
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP--DPATWNSMIS 121
A VF ++ R++++WN MI NG S K+ ++F+ + P D +WNSM+S
Sbjct: 101 SASMVFDKMP-LRDVVSWNKMI-----NGYS-KSNDMFKANSFFNMMPVRDVVSWNSMLS 153
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ Q G ++ ++F M G+ + +L C+ L LG + HG V+R +
Sbjct: 154 GYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDT 213
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D A+AL+ MY K + + R F I + W+A+I+G +N A++ F
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQG--IPEKNSVSWSAIIAGCVQNNLLSLALKFFKE 271
Query: 242 MQQEKVKPNSASFVAVLSACG 262
MQ+ + + + +VL +C
Sbjct: 272 MQKVNAGVSQSIYASVLRSCA 292
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 36/268 (13%)
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
R +F F + S + V CA AL+LGK+ H H+I + +
Sbjct: 29 RVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNC 88
Query: 189 LISMYMKCGQPSWARRFFDQ----------------------------FEIKP-DDPAFW 219
L+ +Y A FD+ F + P D W
Sbjct: 89 LLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSW 148
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N+M+SGY +NGE ++E+F M +E ++ + +F +L C +QI ++
Sbjct: 149 NSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV-V 207
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
G ++D+ + R E+ + + +PE + +++ C + ++L
Sbjct: 208 RVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGC---VQNNLLSL 264
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGR 367
+EM+ N + +IYA + R
Sbjct: 265 ALKFFKEMQKVNAG---VSQSIYASVLR 289
>gi|357469567|ref|XP_003605068.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506123|gb|AES87265.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 494
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/394 (34%), Positives = 227/394 (57%), Gaps = 11/394 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ LS + ++TF++ ACA+L FG +H + K+ ++ + T L+ MY G
Sbjct: 106 LTHSLSLDSFTLTFLA--HACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWG 163
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF E+ RN +TWN I+G++ G+ E A +F+ + +W +I
Sbjct: 164 FLVDAAQVFGEMP-DRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSV----VSWTLVI 218
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
G++++ +A LF KM + G+ P+ + +V A A L +K+ + HG+V +
Sbjct: 219 DGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGF 278
Query: 180 NK-DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
N D + ALI +Y KCG A F + + WN+++SGY G AV+
Sbjct: 279 NAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDT 338
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F+ M++ V+PN +F+++LSAC H+G V++ L+ F M +D+GL P +H+GC++D+LG
Sbjct: 339 FEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLG 398
Query: 299 RSGRLDEARELIRELPEPTVS--VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
R+GRL EA ++ E+P + ++ +LLGAC H N ++G+ + K+ EME + +V
Sbjct: 399 RAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYV 458
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++SNI+A +GR++DV R+R+MI+ R + KLPG S
Sbjct: 459 LMSNIFASVGRFKDVERLREMIDKRNVFKLPGYS 492
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L L++G VHG +K D + + +VDMY KCG + A
Sbjct: 451 EPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQK 510
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + G + +WNS+ISGFS
Sbjct: 511 LHDRIGGQELV------------------------------------SWNSIISGFSLTK 534
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F +M G+ P +VL CA+L+ ++LGK+ HG +I+ ++ DE +++
Sbjct: 535 QSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISS 594
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ + D WNAMI GY +G+ A+E+F+ MQ+ V
Sbjct: 595 TLVDMYAKCGNMPDSLLMFEK--ARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANV 652
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FVAVL AC H G +D Q F +M + L P+ EHF CMVD+LGRS EA
Sbjct: 653 VPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEAL 712
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P E V+ +LL C + ++ E A + ++P++ + +++LSN+YAG G
Sbjct: 713 EFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSG 772
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R R+++ +L K PG S
Sbjct: 773 KWVDVSRTRRLMRQGRLRKEPGCS 796
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 155/353 (43%), Gaps = 18/353 (5%)
Query: 11 SVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ TF + CAS L G+ H L T + L+ MY +CG AH V
Sbjct: 17 TATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGV 76
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQL 126
F + R+ ++WNTM+ + G ++ A LF G PDP +WN++ISG+ Q
Sbjct: 77 FDTMP-HRDTVSWNTMLTAYVHAGDTDTAASLF------GTMPDPDVVSWNTLISGYCQH 129
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
GM + L +M G+ + +L +C L L LG + H ++ L D
Sbjct: 130 GMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAG 189
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+AL+ MY KC A RFF + + W A I+G +N +Y +E+F MQ+
Sbjct: 190 SALVDMYGKCRSLDDALRFFHG--MGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLG 247
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ + ++ + +C + A Q+ + + +VD+ ++G L +A
Sbjct: 248 LGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNV-FSSDRVVGTAIVDVYAKAGNLVDA 306
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
R LP V ++++ + + LG E AM+L + + F ++S
Sbjct: 307 RRAFIGLPHHNVETCNAMMVGL---VRTGLGAE-AMQLFQFMTRSGVGFDVIS 355
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 51/303 (16%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ V SACA + G QVH L +K D + A++D+Y KC L A+ VF
Sbjct: 352 DVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVF 411
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
QE++ + D +WN++I+ Q
Sbjct: 412 QEME------------------------------------QRDSVSWNAIIAALEQNECY 435
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ +M +GM P SVL ACA L +L+ G HG I++ L D +++ +
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG + A++ D+ I + WN++ISG+ + E A F M VKP
Sbjct: 496 VDMYCKCGAITEAQKLHDR--IGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKP 553
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------CMVDLLGRSGRL 303
+ ++ VL C + ++ QI G KQE G +VD+ + G +
Sbjct: 554 DHFTYATVLDTCANLATIELGKQI-------HGQIIKQEMLGDEYISSTLVDMYAKCGNM 606
Query: 304 DEA 306
++
Sbjct: 607 PDS 609
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 41/297 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ S +CA++ L RQ+H +K SD ++GTA+VD+Y K
Sbjct: 255 YASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAK--------------- 299
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
AG +++ R F GL H + T N+M+ G + G+ EA
Sbjct: 300 ------------AGNLVDAR-----RAFIGLPHHNVE----TCNAMMVGLVRTGLGAEAM 338
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+LF+ M +G+ + ++ V SACA++ G + H +++ + D + A++ +Y
Sbjct: 339 QLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLY 398
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KC A F + E + D WNA+I+ +N YE + + M + ++P+ +
Sbjct: 399 GKCKALVEAYLVFQEMEQR--DSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456
Query: 254 FVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +VL AC ++ L + + GL +VD+ + G + EA++L
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS--STVVDMYCKCGAITEAQKL 511
>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
[Vitis vinifera]
gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 204/388 (52%), Gaps = 39/388 (10%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + + F + AC+ L LQ GR VH LK + D ++ AL+ +Y + GC
Sbjct: 171 CQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCF- 229
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
++A+ +F+G+ H + +WNS+I+G
Sbjct: 230 -------------------------------DEALRVFDGMPHR----NVVSWNSLIAGL 254
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ FEA + F MQ GM S +T++L CA ++AL GKE H ++++ D
Sbjct: 255 VKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDA 314
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +L+ MY KCG + RR F+ + K D WN +I+GY NG A+E F M
Sbjct: 315 PVLNSLVDMYAKCGAMDYCRRVFNGMQGK--DLTSWNTLITGYAINGRMTEAMESFQEMI 372
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
P+ +F+A+LS C HAG D ++F MM D+G+ P EH+ C+VD+LGR+GR+
Sbjct: 373 CSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDYGISPTVEHYACLVDVLGRAGRI 432
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E+++ +P +PT S++ SLL +C H N L E +A +L E+EP N +V+LSNIY
Sbjct: 433 KEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIY 492
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A G WE V +R+ + R +TK G S
Sbjct: 493 ANAGMWESVKVVREFMEKRGMTKEAGCS 520
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 18/224 (8%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV 174
NS + S+ G EA +L E +S P ++ L +C AL+ G+ + +
Sbjct: 35 NSTLKSLSKSGKLDEALRLIEYWPSKSPATAPDVEACALFLHSCISRKALEHGQRLYLQL 94
Query: 175 IRA------DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP-AFWNAMISGYG 227
+ +L + ++ LI+++ C + ARR F+ D P + W AM GY
Sbjct: 95 LLYRDRCNHNLLNNPTLKGKLITLFSVCRRVDEARRVFEDGGEDVDLPESVWVAMGIGYS 154
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA----LQIFTMMDDDFGL 283
RNG + A+ ++ M + + + +F L AC G + Q+ +D
Sbjct: 155 RNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATED---- 210
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
P Q ++ L G DEA + +P V ++SL+
Sbjct: 211 -PDQVVNNALLRLYSEDGCFDEALRVFDGMPHRNVVSWNSLIAG 253
>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
lyrata]
Length = 828
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 219/409 (53%), Gaps = 31/409 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T + AC + G Q+HGL ++ + D +G +L+ MY K G + A VF
Sbjct: 274 NSNTLAVMFRACRDFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVF 333
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE----------GF---------- 109
+K ++ ++WN++I G++ + +A ELFE + + GF
Sbjct: 334 GVMK-YKDSVSWNSLITGLVQREQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 110 -------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D TW +MIS F G EA F KM + P+ +SVLSA A L+
Sbjct: 393 ELFGMMPEKDDITWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLA 452
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L G + HG V++ ++ D S+ +L+SMY KCG + A + F I + +N M
Sbjct: 453 DLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSC--ISEPNIVSYNTM 510
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISG+ NG + AV++F +++ +PN +F+A+LSAC H G+VD + F M +G
Sbjct: 511 ISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYG 570
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
++P +H+ CMVDL GRSG LDEA LI +P EP V+ SLL A HL DL E A
Sbjct: 571 IEPGPDHYACMVDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
KL E+EP++ TP+V+LS +Y+ +G+ D RI + +++ K PG S
Sbjct: 631 KKLIELEPDSATPYVVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSS 679
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 151/334 (45%), Gaps = 33/334 (9%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE---KQSDTMIGTALVDMYLKCG 60
C E N+V++ ++I+ +++ GR L E K D + L+ YL+ G
Sbjct: 137 CDIPEKNAVSYATMITG-----FVRAGRFDEAECLYAETPVKFRDPVASNVLLSGYLRVG 191
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A VF+ + + ++++++M+ G GR A LF+ + + TW +MI
Sbjct: 192 KWNEAVRVFEGM-AVKEVVSYSSMVDGYCKMGRILDARSLFDRMPER----NVITWTAMI 246
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL-SACADLSALKLGKETHGHVIRADL 179
G+ + G + F LF +M+ G V +V+ AC D + G + HG + R L
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACRDFFRYREGSQIHGLLSRMPL 306
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +LISMY K G A+ F + K D WN++I+G + + A E+F
Sbjct: 307 EFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYK--DSVSWNSLITGLVQREQISEAYELF 364
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH--FGCMVDLL 297
+ M + + S+ ++ G + K +++F MM P+++ + M+
Sbjct: 365 EKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM-------PEKDDITWTAMISAF 413
Query: 298 GRSGRLDEA----RELIRELPEPTVSVYHSLLGA 327
+G +EA +++R+ P + S+L A
Sbjct: 414 VSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSA 447
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF SV+SA ASL L G Q+HG +K+ +D + +LV MY KCG A+ +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + NI+++NTMI+G NG ++A++LF L G +P+ T+ +++S +G
Sbjct: 496 FSCIS-EPNIVSYNTMISGFSYNGFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGY 554
Query: 129 RFEAFKLFEKMQ-STGMVP 146
+K F+ M+ S G+ P
Sbjct: 555 VDLGWKYFKSMKFSYGIEP 573
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 53/252 (21%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S I N+ I+ + NG ++A +F ++H +WN+MIS +++ G +A++
Sbjct: 47 STAIFQCNSQISKLARNGNLQEAEAIFRQMSHRSI----VSWNAMISAYAENGKMSKAWQ 102
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA-LISMY 193
+F++M +T+++ D LGK + + D+ + +++ A +I+ +
Sbjct: 103 VFDEMPVRATTSYNAMITAMIKNKCD-----LGK---AYELFCDIPEKNAVSYATMITGF 154
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
++ G+ A + + +K DP N ++SGY R G++ AV +F+ M ++V S+
Sbjct: 155 VRAGRFDEAECLYAETPVKFRDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSS- 213
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
MVD + GR+ +AR L +
Sbjct: 214 ---------------------------------------MVDGYCKMGRILDARSLFDRM 234
Query: 314 PEPTVSVYHSLL 325
PE V + +++
Sbjct: 235 PERNVITWTAMI 246
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 40/232 (17%)
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE----------------- 102
G L A +F+++ R+I++WN MI+ NG+ KA ++F+
Sbjct: 64 GNLQEAEAIFRQMS-HRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATTSYNAMITAM 122
Query: 103 -------GLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G A+E F + + ++ +MI+GF + G EA L+ + +K
Sbjct: 123 IKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAECLYAE-------TPVKFR 175
Query: 152 TSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V S L++GK V K+ ++++ Y K G+ AR FD+
Sbjct: 176 DPVASNVLLSGYLRVGKWNEAVRVFEGMAVKEVVSYSSMVDGYCKMGRILDARSLFDR-- 233
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSAC 261
+ + W AMI GY + G +E +F M+QE V+ NS + + AC
Sbjct: 234 MPERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRAC 285
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVH---GLTLKIEKQSDTMIGTALVDMYL 57
M E EPN VTF++++SAC + Y+ G + + IE D +VD++
Sbjct: 529 MLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDHY--ACMVDLFG 586
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
+ G L A+N+ + + W ++++ + R + A + L +PD AT
Sbjct: 587 RSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIE--LEPDSAT 642
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 215/384 (55%), Gaps = 6/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN V ++++SAC + G Q+HG +K I T ++ Y CG + A
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ ++ +WN + AG + NG + A++ F+ + D +W++MISG++Q
Sbjct: 375 F-EVGVKDHLESWNALTAGFIKNGMMDHALKTFDKM----HVRDVFSWSTMISGYAQSEH 429
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF KM + G+ P+ + SV SA A L L+ GK H ++ + ++++ A
Sbjct: 430 PKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAA 489
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A +FF+Q + + WNA+I G +G +E+F MQ+ +K
Sbjct: 490 LIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIK 549
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VLSAC HAG V+ +IF M + ++P +H+GCM+D+LGR+G L+EA E
Sbjct: 550 PNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEE 609
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+IR +P E + ++ +LL AC H N ++GE A L + P + V+LSNIYA G+
Sbjct: 610 MIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGK 669
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WE+V +R ++ + + + PG S
Sbjct: 670 WEEVSFVRSVMQGQTMDREPGYSG 693
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 42/382 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T ++VISAC+ L + R VHGL +K+ ++ T L+ Y C + A +
Sbjct: 183 PNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRL 242
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN++TWN M+ G G ++A ELF+G+ + D +W +MI G+ Q G
Sbjct: 243 FDEMP-ERNLVTWNVMLNGYAKTGLVDEARELFDGICDK----DVISWGTMIDGYIQKGR 297
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +++ M TG P+ + +++SAC +A+ G + HG V++ + + T
Sbjct: 298 LREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTT 357
Query: 189 LISMYMKCGQ----------------PSW---------------ARRFFDQFEIKPDDPA 217
+I Y CG SW A + FD+ ++ D
Sbjct: 358 IIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVR--DVF 415
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
W+ MISGY ++ + A+E+F M +KPN + V+V SA G + + M
Sbjct: 416 SWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYM 475
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE--PTVSVYHSLLGACWCHLNSD 335
+ + ++D+ + G ++ A + ++ + +VS +++++ H ++
Sbjct: 476 RSE-SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHAS 534
Query: 336 LGEEMAMKLQEMEPE-NPTPFV 356
+ E+ +Q + NP F+
Sbjct: 535 MCLEVFSDMQRFHIKPNPITFI 556
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 155/298 (52%), Gaps = 12/298 (4%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+ +S + +C+SL ++ GRQ+H L K+ +T I +L++MY KCG + A +F
Sbjct: 54 LALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDG 113
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ + ++ N M++G + NG+ + A +LF+ + ++G ++ +MI GF Q G E
Sbjct: 114 F-ATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKG----CVSYTTMIMGFVQNGFFRE 168
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A ++F+ M+S G+VP+ + +V+SAC+ L + + HG V++ + ++T L+
Sbjct: 169 ALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMH 228
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y C ARR FD E+ + WN M++GY + G + A E+FD + + V
Sbjct: 229 AYCLCSGVREARRLFD--EMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDV---- 282
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
S+ ++ G + +AL+I+ M G P + +V GR + + +L
Sbjct: 283 ISWGTMIDGYIQKGRLREALEIYRAMLQT-GHGPNEVMIVNLVSACGRGTAIVDGWQL 339
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV SA A+L LQ G+ H + + AL+DMY KCG + A
Sbjct: 446 KPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQ 505
Query: 68 VFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F +++ ++ WN +I G+ +G + +E+F + KP+P T+ ++S
Sbjct: 506 FFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHA 565
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLK---CVTSVL 155
G+ ++F+ M+S V P +K C+ +L
Sbjct: 566 GLVESGKRIFKTMKSAYNVEPDIKHYGCMIDIL 598
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 218/379 (57%), Gaps = 8/379 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+SV +V+SAC L +GR +H D+ + TAL++MY CG + A
Sbjct: 219 KPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARK 278
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++ L S++++ M++G G + A +F+ + + D W++MISG+++
Sbjct: 279 IYDGL-SSKHLIVSTAMLSGYAKLGMVKDARFIFDQM----IERDLVCWSAMISGYAESD 333
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA KLF++M VP + SV+SAC+ + AL H +V R+ + S+
Sbjct: 334 QPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNN 393
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR F+ K + W++MI+ + +G +SA+++F M++ +
Sbjct: 394 ALIDMYAKCGNLVKAREVFENMPRK--NVISWSSMINAFAMHGNADSAIKLFRRMKEVNI 451
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+ VL ACGHAG V++ ++F+ M ++ G+ P +EH+GCMVDL R+ L +A
Sbjct: 452 EPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAI 511
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P P V ++ SL+ AC H ++LGE A +L E+EP++ V+LSNIYA
Sbjct: 512 ELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEK 571
Query: 367 RWEDVGRIRQMINDRQLTK 385
RW DVG IR+ ++ + ++K
Sbjct: 572 RWNDVGLIRKSMSYKGISK 590
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 169/351 (48%), Gaps = 9/351 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+F S++ A + + G ++HGL K+ D I T L+ MY C + A +F ++
Sbjct: 123 SFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKM 182
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ + WN +I G NG + A+ LFE + KPD +++S G
Sbjct: 183 -CHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYG 241
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ E ++ G T++++ A+ A+ L ++ + + L ++TA++S
Sbjct: 242 RTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHL----IVSTAMLSG 297
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y K G AR FDQ + D W+AMISGY + + + A+++FD M Q++ P+
Sbjct: 298 YAKLGMVKDARFIFDQ--MIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQI 355
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ ++V+SAC H G + +A I T +D G ++D+ + G L +ARE+
Sbjct: 356 TMLSVISACSHVGALAQANWIHTYVDRS-GFGRALSVNNALIDMYAKCGNLVKAREVFEN 414
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+P V + S++ A H N+D ++ +++E+ E P + +YA
Sbjct: 415 MPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIE-PNGVTFIGVLYA 464
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 202/384 (52%), Gaps = 37/384 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT ++ ACASL L+ GR +HG +K S+ + T+L+DMY KC CL + +
Sbjct: 320 RPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFS 379
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + WN+++SG
Sbjct: 380 VFTRTSRKKTV------------------------------------PWNALLSGCVHNK 403
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF+KM G+ + S+L A L+ L+ + +++R+ + +AT
Sbjct: 404 LATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVAT 463
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI +Y KCG A + F+ + D W+ +I+GYG +G E+AV +F M Q V
Sbjct: 464 SLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGV 523
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F +VL +C HAG VD L +F M D P +H+ CMVDLLGR+GR+DEA
Sbjct: 524 KPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMVDLLGRAGRMDEAY 583
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P P +V+ +LLGAC H N +LGE A L E+EP N +V+L+ +YA LG
Sbjct: 584 DLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTGNYVLLAKLYAALG 643
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWED +RQ ++D L K P S
Sbjct: 644 RWEDAENVRQRMDDIGLRKAPAHS 667
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 39/254 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ VI AC+ LL +++GR +HGLTL + S + +L+ MY+ CG + A V
Sbjct: 120 PDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKV 179
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K +++++WNTMI G NG + A+ +F + G + D A+
Sbjct: 180 FDAMK-EKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGAS------------- 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
V SVL AC L L++G+ HG V L K + ++ A
Sbjct: 226 ----------------------VVSVLPACGYLKELEVGRRVHGLVEEKVLGK-KIVSNA 262
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG AR FD + D W +MI+GY NG+ +SA+ +F +MQ E ++
Sbjct: 263 LVDMYAKCGSMDEARLVFDN--MVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLR 320
Query: 249 PNSASFVAVLSACG 262
PNS + +L AC
Sbjct: 321 PNSVTIALILLACA 334
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 44/316 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ--SDTMIGTALVDMYLKCGCLPCA 65
E + + +SV+ AC L L+ GR+VHGL +E++ ++ ALVDMY KCG + A
Sbjct: 220 EIDGASVVSVLPACGYLKELEVGRRVHGL---VEEKVLGKKIVSNALVDMYAKCGSMDEA 276
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + + D +W SMI+G+
Sbjct: 277 RLVFDNM------------------------------------VERDVVSWTSMINGYIL 300
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G A LF+ MQ G+ P+ + +L ACA L+ LK G+ HG V++ L + ++
Sbjct: 301 NGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAV 360
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KC + F + K P WNA++SG N A+ +F M E
Sbjct: 361 ETSLIDMYAKCNCLGLSFSVFTRTSRKKTVP--WNALLSGCVHNKLATEAIGLFKKMLME 418
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+ N+A+ ++L A G + I + + G + ++D+ + G L+
Sbjct: 419 GVEINAATCNSLLPAYGILADLQPVNNINSYLMRS-GFVSNIQVATSLIDIYSKCGSLES 477
Query: 306 ARELIRELPEPTVSVY 321
A ++ +P ++
Sbjct: 478 AHKIFNTIPVDVQDIF 493
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 133/272 (48%), Gaps = 15/272 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKC 150
G A +LF+ L G +N MI + G FEA K+F E + S P
Sbjct: 69 GYVHNARKLFDELRQRG----TLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYT 124
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V+ AC++L ++ G+ HG + + + +L++MYM CG+ AR+ FD
Sbjct: 125 YPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDA-- 182
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+K WN MI+GY +NG +A+ +F+ M V+ + AS V+VL ACG+ ++
Sbjct: 183 MKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVG 242
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
++ ++++ + K+ +VD+ + G +DEAR + + E V + S++
Sbjct: 243 RRVHGLVEEK--VLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYI- 299
Query: 331 HLNSDLGEEMA----MKLQEMEPENPTPFVIL 358
LN D ++ M+++ + P + T +IL
Sbjct: 300 -LNGDAKSALSLFKIMQIEGLRPNSVTIALIL 330
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ P S+L +L K+ H H+I + L + + + L++ Y CG AR
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSID-IRSVLVATYAHCGYVHNAR 75
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACG 262
+ FD E++ +N MI Y G+Y A+++F +++ + P++ ++ V+ AC
Sbjct: 76 KLFD--ELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACS 133
Query: 263 HAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLG---RSGRLDEARELIRELPEPT 317
V+ + L T++ FG H + LL G ++EAR++ + E +
Sbjct: 134 ELLLVEYGRVLHGLTLV-SKFG-----SHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKS 187
Query: 318 VSVYHSLL 325
V +++++
Sbjct: 188 VVSWNTMI 195
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 225/444 (50%), Gaps = 67/444 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL------ 62
PN TF V+ AC L L GR VHGL +K + D IG ALV+ Y +C +
Sbjct: 230 PNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRV 289
Query: 63 ------PCAHNVFQELKG------------------SRNILTWNTMIAGMML-------- 90
PC + + ++G N +++N MI G +
Sbjct: 290 CKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSK 349
Query: 91 -----------------------NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
NG +KA+ELFE +E DP TWNSMISG+ G
Sbjct: 350 RLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNE---KDPVTWNSMISGYIHSG 406
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA KL+ M + + +++ AC+ L +L G+ H H+I+ + + T
Sbjct: 407 QPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGT 466
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG A+ F I + A W A+I+G+ +G A+ +FD M ++ +
Sbjct: 467 SLIDMYSKCGSIMEAQTSF--VSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGL 524
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FV VLSAC AG V++ ++IF M+ + + P EH+ C+VDLLGRSG + EA
Sbjct: 525 APNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAE 584
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I+++P E V+ +LL ACW ++ ++GE +A K+ +P+ + +VILSNIYAGLG
Sbjct: 585 EFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLG 644
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW + +R+++ ++ K PG S
Sbjct: 645 RWREKMMVRKILRGFKVKKDPGCS 668
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 168/391 (42%), Gaps = 64/391 (16%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV+S CA L L+ G+ +H L LK +S ++G+AL+ Y C + A VF L
Sbjct: 100 TFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVL 159
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ----LGM 128
RN + W+ M+ G + + A+ +F + + D W ++ISGFS+ G
Sbjct: 160 V-RRNEVLWSLMLVGYVTCNVMDDALSVFVKMP----RRDVVAWTTLISGFSKNGDGCGK 214
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E F+L M+S P+ V+ AC L L +G+ HG +++ L D S+ A
Sbjct: 215 ALEIFRLM--MRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGA 272
Query: 189 LISMYMKC-------------------------------GQPSWARRFFDQFEIKPDDPA 217
L+ Y +C G+ A F+ + +P
Sbjct: 273 LVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNG--MTEMNPV 330
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+N MI GY G+ + + +F+ M + ++ ++S G +DKAL++F
Sbjct: 331 SYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSN----TMISVYSRNGEIDKALELFEET 386
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI----RELPEPTVSVYHSLLGACWCHLN 333
++ + M+ SG+ +EA +L R + T S + +L AC C +
Sbjct: 387 KNE----KDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGS 442
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
G+ + L + TPF SN+Y G
Sbjct: 443 LHQGQLLHAHLIK------TPFE--SNVYVG 465
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
I++ N I+ + + A +LF+ + +WN+MIS +S+ G EA L
Sbjct: 32 IISTNIAISNYAKQSKLDVARQLFDQMPQRTV----VSWNTMISSYSKHGRFSEALFLVY 87
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
M + M S +SVLS CA L L+ GK H V+++ E + +AL+ Y C
Sbjct: 88 SMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCF 147
Query: 198 QPSWARRFFDQF-----------------------------EIKPDDPAFWNAMISGYGR 228
+ ARR FD ++ D W +ISG+ +
Sbjct: 148 EIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSK 207
Query: 229 NGE-YESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
NG+ A+EIF LM + + PN +F V+ ACG G + + ++ GL+
Sbjct: 208 NGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLL-MKCGLEYD 266
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
G +V+ +D+A + + + P ++ +SL+ ++ E+ +
Sbjct: 267 PSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGL---ISMGRIEDAELVFNG 323
Query: 347 MEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
M NP + ++ YA G+ +D R+ + + R +
Sbjct: 324 MTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTI 360
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 118/255 (46%), Gaps = 20/255 (7%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
LS + TF ++ AC+ L L G+ +H +K +S+ +GT+L+DMY KCG +
Sbjct: 421 LSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIME 480
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F + S N+ W +I G +G +A+ LF+ + +G P+ AT+ ++S S
Sbjct: 481 AQTSFVSI-FSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSACS 539
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ G+ E K+F M+ + P+L+ CV +L + +E + + L
Sbjct: 540 RAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHI------REAEEFIKKMPLE 593
Query: 181 KDESMATALIS-----MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D + AL+S M ++ G+ R F P + + + + Y G +
Sbjct: 594 ADGVVWGALLSACWFWMDLEVGE----RVAEKMFSFDPKPISSYVILSNIYAGLGRWREK 649
Query: 236 VEIFDLMQQEKVKPN 250
+ + +++ KVK +
Sbjct: 650 MMVRKILRGFKVKKD 664
>gi|15223809|ref|NP_177827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098688|sp|O49287.1|PP127_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial; Flags: Precursor
gi|2829915|gb|AAC00623.1| Hypothetical protein [Arabidopsis thaliana]
gi|332197804|gb|AEE35925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 695
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 217/382 (56%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T +VI+AC L +L+ G+Q+H K D ++ + L+DMY KCG A +F
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ IL N+MI GR + A +FE + ++ +WNSM +GFSQ G
Sbjct: 377 SEVESYDTILL-NSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNSMTNGFSQNGCT 431
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E + F +M + ++SV+SACA +S+L+LG++ L+ D+ ++++L
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSL 491
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I +Y KCG RR FD +K D+ WN+MISGY NG+ A+++F M ++P
Sbjct: 492 IDLYCKCGFVEHGRRVFDTM-VKSDEVP-WNSMISGYATNGQGFEAIDLFKKMSVAGIRP 549
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+ VL+AC + G V++ ++F M D G P +EHF CMVDLL R+G ++EA L
Sbjct: 550 TQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINL 609
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ E+P + S++ S+L C + +G++ A K+ E+EPEN +V LS I+A G W
Sbjct: 610 VEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E +R+++ + +TK PG S
Sbjct: 670 ESSALVRKLMRENNVTKNPGSS 691
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 36/350 (10%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +++T +V+ ACA L L+ G+Q+H L + D+ + ++LV++Y KCG L
Sbjct: 181 LNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A + ++++ + + + +I+G GR ++ LF+ ++ WNSMISG+
Sbjct: 241 ASYMLEQIREPDD-HSLSALISGYANCGRVNESRGLFDRKSNRCV----ILWNSMISGYI 295
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
M+ EA LF +M++ S + + +V++AC L L+ GK+ H H + L D
Sbjct: 296 ANNMKMEALVLFNEMRNETREDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIV 354
Query: 185 MATALISMYMKCGQPSWARRFFDQFE-----------------------------IKPDD 215
+A+ L+ MY KCG P A + F + E I+
Sbjct: 355 VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKS 414
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+M +G+ +NG +E F M + + + S +V+SAC ++ Q+F
Sbjct: 415 LISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA 474
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL Q ++DL + G ++ R + + + ++S++
Sbjct: 475 RA-TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMI 523
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 182/439 (41%), Gaps = 99/439 (22%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI-GTALVDMYLKCGCLPCAHNVFQEL 72
++ ++ +C+S RQ +GL LK S +I L+ MY + G + A N+F E+
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFE---------------GLAHEGF-------- 109
RN +WNTMI G M +G ++ F+ G A G
Sbjct: 89 P-DRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 110 ----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
+ D T NS++ G+ G EA +LF+++ + +L T+VL ACA+L ALK
Sbjct: 148 NAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITL---TTVLKACAELEALK 204
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA-------- 217
GK+ H ++ + D M ++L+++Y KCG A +Q +PDD +
Sbjct: 205 CGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISGY 263
Query: 218 ----------------------FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
WN+MISGY N A+ +F+ M+ E + +S +
Sbjct: 264 ANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TREDSRTLA 322
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
AV++AC G ++ Q+ FGL ++D+ + G EA +L E
Sbjct: 323 AVINACIGLGFLETGKQMHCHA-CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSE--- 378
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
V Y ++L LNS + +Y GR +D R+
Sbjct: 379 --VESYDTIL------LNS-----------------------MIKVYFSCGRIDDAKRVF 407
Query: 376 QMINDRQLTKLPGISAGIT 394
+ I ++ L ++ G +
Sbjct: 408 ERIENKSLISWNSMTNGFS 426
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 200/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T ++AC + L+ G+++HG L+ + T +G+AL+ MY C L A +
Sbjct: 496 DPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACS 555
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF EL D WNS+IS +Q G
Sbjct: 556 VFSELS------------------------------------TRDVVVWNSIISACAQSG 579
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A L +M + + + + S L AC+ L+AL+ GKE H +IR L+ +
Sbjct: 580 RSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILN 639
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY +CG +RR FD + D WN MIS YG +G AV +F + +
Sbjct: 640 SLIDMYGRCGSIQKSRRIFDLMPQR--DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL 697
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F +LSAC H+G +++ + F MM ++ + P E + CMVDLL R+G+ +E
Sbjct: 698 KPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETL 757
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++P EP +V+ SLLGAC H N DL E A L E+EP++ +V+++NIY+ G
Sbjct: 758 EFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAG 817
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWED +IR ++ +R +TK PG S
Sbjct: 818 RWEDAAKIRCLMKERGVTKPPGCS 841
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 177/325 (54%), Gaps = 5/325 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
+PNS+T S +SAC +L L+ GR++HG +K+E+ SD ++G +LVD Y KC + A
Sbjct: 359 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 418
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F +K + ++++WN M+AG L G E+A+EL + +G +PD TWN +++GF+Q
Sbjct: 419 RKFGMIKQT-DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQY 477
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G A + F++M S GM P+ ++ L+AC + LKLGKE HG+V+R + +
Sbjct: 478 GDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVG 537
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+ALISMY C A F E+ D WN++IS ++G +A+++ M
Sbjct: 538 SALISMYSGCDSLEVACSVFS--ELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+ N+ + V+ L AC + + +I + GL ++D+ GR G + ++
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFI-IRCGLDTCNFILNSLIDMYGRCGSIQKS 654
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
R + +P+ + ++ ++ H
Sbjct: 655 RRIFDLMPQRDLVSWNVMISVYGMH 679
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 159/339 (46%), Gaps = 41/339 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F V AC+ L + G+ V+ L I + ++ + +++DM++KCG + A
Sbjct: 187 RPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARR 246
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+E++ +++ WN M++G G +KA++ + G KPD TWN++ISG++Q G
Sbjct: 247 FFEEIE-FKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305
Query: 128 M------------------------------------RFEAFKLFEKMQSTGMVPSLKCV 151
FEA +F KM G+ P+ +
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365
Query: 152 TSVLSACADLSALKLGKETHGHVIRA-DLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
S +SAC +LS L+ G+E HG+ I+ +L+ D + +L+ Y KC ARR F
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGM-- 423
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
IK D WNAM++GY G +E A+E+ M+ + ++P+ ++ +++ G A
Sbjct: 424 IKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAA 483
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
L+ F M G+ P + G+ L +E+
Sbjct: 484 LEFFQRM-HSMGMDPNTTTISGALAACGQVRNLKLGKEI 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 42/319 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ S++ C L L+ G QVH + +G+ L+++Y + GC+ A +F ++
Sbjct: 92 YASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMS 151
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+ +W + ME++ GL G E
Sbjct: 152 -ERNVFSWTAI-------------MEMYCGL----------------------GDYEETI 175
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
KLF M + G+ P V AC++L ++GK+ + +++ + + +++ M+
Sbjct: 176 KLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMF 235
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+KCG+ ARRFF++ E K D WN M+SGY GE++ A++ M+ VKP+ +
Sbjct: 236 IKCGRMDIARRFFEEIEFK--DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA----REL 309
+ A++S +G ++A + F M KP + ++ ++G EA R++
Sbjct: 294 WNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKM 353
Query: 310 IRELPEPTVSVYHSLLGAC 328
+ E +P S + AC
Sbjct: 354 VLEGVKPNSITIASAVSAC 372
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 17/258 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N+VT +S + AC+ L L+ G+++H ++ + I +L+DMY +CG + +
Sbjct: 597 EVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRR 656
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +L R++++WN MI+ ++G A+ LF+ G KP+ T+ +++S S G
Sbjct: 657 IF-DLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG 715
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K F+ M++ M P+++ C+ +LS + ET + + +
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFN------ETLEFIEKMPFEPNA 769
Query: 184 SMATALISMYMKCGQPS---WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ +L+ P +A R+ FE++P + M + Y G +E A +I
Sbjct: 770 AVWGSLLGACRIHCNPDLAEYAARYL--FELEPQSSGNYVLMANIYSAAGRWEDAAKIRC 827
Query: 241 LMQQEKV-KPNSASFVAV 257
LM++ V KP S++ V
Sbjct: 828 LMKERGVTKPPGCSWIEV 845
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 12/262 (4%)
Query: 120 ISGFS------QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
I+GFS + G+ A L M T ++ S+L C L L+LG + H
Sbjct: 55 ITGFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQ 114
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
++ ++ E + + L+ +Y + G ARR FD+ + + W A++ Y G+YE
Sbjct: 115 LVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK--MSERNVFSWTAIMEMYCGLGDYE 172
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
+++F LM E V+P+ F V AC + ++ M G + G +
Sbjct: 173 ETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM-LSIGFEGNSCVKGSI 231
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC--HLNSDLGEEMAMKLQEMEPEN 351
+D+ + GR+D AR E+ V +++ ++ L MKL ++P+
Sbjct: 232 LDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQ 291
Query: 352 PTPFVILSNIYAGLGRWEDVGR 373
T I+S YA G++E+ +
Sbjct: 292 VTWNAIISG-YAQSGQFEEASK 312
>gi|255563078|ref|XP_002522543.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538234|gb|EEF39843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 141/390 (36%), Positives = 221/390 (56%), Gaps = 16/390 (4%)
Query: 9 PNSVTFISVISACAS----LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
P+ T+ ++ A S L G VHG LK E + D ++ TALVD Y+K G +
Sbjct: 141 PDGFTYSMILKASTSGDNVTLSCNLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGRVGY 200
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +N++ +MI+G M G E A E+FE + D +N+MI G+S
Sbjct: 201 ARKVF-DMMMEKNVICSTSMISGYMNRGSVEDAEEIFE----RTVEKDVVVFNAMIEGYS 255
Query: 125 QLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E A +++ +MQ G P+L SV+ AC+ L+ ++G++ G +++ + +
Sbjct: 256 KSVQTAEKALEVYVEMQRYGFRPNLSTFASVIGACSVLAGFEIGQQVQGQLLKREFFTNV 315
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLM 242
+ALI MY KCG+ ARR F+Q P+ F W++MI GYG+NG + A+++F M
Sbjct: 316 KTGSALIDMYSKCGRIEDARRAFEQM---PEKNVFSWSSMIDGYGKNGRPDEALQLFHKM 372
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q ++PN +F+ LSACGHAG V K +IF M+ ++ LKP EH+ CMVDLLGR+G
Sbjct: 373 QDCCIEPNYVTFLGALSACGHAGLVSKGREIFESMEREYSLKPGMEHYACMVDLLGRAGS 432
Query: 303 LDEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT-PFVILSN 360
L+ A E + +PE P+ V+ +LL AC H N ++ A +L ++ E + +V LSN
Sbjct: 433 LNLAWEFVMGMPEKPSSDVWAALLSACNLHGNVEMASVAANELFKLNAEGRSGAYVALSN 492
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A G+W+ V +R+++ R + K G S
Sbjct: 493 TLAAAGKWDGVTEVREIMKSRGILKDTGSS 522
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 175/401 (43%), Gaps = 85/401 (21%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H +K +T + L+ +YLKCGCL A +F EL R + +N +I G +
Sbjct: 61 GQKIHAHIVKTGFIPNTNVSIKLLILYLKCGCLKYARQMFDELP-QRTLSAYNYLIGGYL 119
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
G + +M L L EG +PD T++ ++ K ++G +L
Sbjct: 120 KLGLVQDSMNLVRRLVLEGQRPDGFTYSMIL-----------------KASTSGDNVTLS 162
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
C LG HG ++++++ D+ + TAL+ Y+K G+ +AR+ FD
Sbjct: 163 C--------------NLGSVVHGQILKSEVEPDDVLYTALVDSYVKSGRVGYARKVFDMM 208
Query: 210 EIK-----------------------------PDDPAFWNAMISGYGRNGEY-ESAVEIF 239
K D +NAMI GY ++ + E A+E++
Sbjct: 209 MEKNVICSTSMISGYMNRGSVEDAEEIFERTVEKDVVVFNAMIEGYSKSVQTAEKALEVY 268
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF------GCM 293
MQ+ +PN ++F +V+ AC L F + G K+E F +
Sbjct: 269 VEMQRYGFRPNLSTFASVIGAC-------SVLAGFEIGQQVQGQLLKREFFTNVKTGSAL 321
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPEN 351
+D+ + GR+++AR ++PE V + S++ + D ++ K+Q+ +EP
Sbjct: 322 IDMYSKCGRIEDARRAFEQMPEKNVFSWSSMIDGYGKNGRPDEALQLFHKMQDCCIEPNY 381
Query: 352 PTPFVILSNI-YAGLGRWEDVGRIRQMIN--DRQLTKLPGI 389
T LS +AGL V + R++ +R+ + PG+
Sbjct: 382 VTFLGALSACGHAGL-----VSKGREIFESMEREYSLKPGM 417
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 209/377 (55%), Gaps = 31/377 (8%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
++ + + T ++ Y + + A +F E+ + ++W +M+ G L+GR E A E F
Sbjct: 199 RERNVITWTTMITGYGQNKRVDVARKLF-EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 102 E-----------------GLAHEGFKP----------DPATWNSMISGFSQLGMRFEAFK 134
E G E K D ATW MI + + G EA +
Sbjct: 258 EVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALE 317
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
LF +MQ G+ PS + S+LS CA L++L+ G++ H H++R + D +A+ L++MY+
Sbjct: 318 LFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYV 377
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ A+ FD+F K D WN++ISGY +G E A+++F M PN +
Sbjct: 378 KCGELVKAKLVFDRFPSK--DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTL 435
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+A+L+AC + G +++ L+IF M+ F + P EH+ C VD+LGR+G++D+A ELI +
Sbjct: 436 IAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMT 495
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+P +V+ +LLGAC H DL E A KL E+EPEN P+++LS+I A +W DV
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAE 555
Query: 374 IRQMINDRQLTKLPGIS 390
+R+ + + ++K PG S
Sbjct: 556 MRKNMRTKNVSKFPGCS 572
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
++V Y G A +F E+ RNI++WN +++G + N E+A +FE +
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMP-ERNIVSWNGLVSGYIKNRMIEEARNVFEIMPER-- 108
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +W +M+ G+ Q GM EA LF +M V ++ A KL
Sbjct: 109 --NVVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDM 166
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
G KD +T +I + G+ AR FD E++ + W MI+GYG+N
Sbjct: 167 MPG--------KDVVASTNMIGGLCREGRVDEAREIFD--EMRERNVITWTTMITGYGQN 216
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+ A ++F++M ++ S+ ++L +G ++ A + F +M P +
Sbjct: 217 KRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265
Query: 290 FGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
C M+ LG G + +AR + ++ + + + ++ A
Sbjct: 266 IACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKA 305
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 120/278 (43%), Gaps = 40/278 (14%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G + A F L+ + I +WN++++G NG +A ++F+ + +WN
Sbjct: 29 RIGQINEARKFFDSLR-YKAIGSWNSIVSGYFANGLPREARQMFDEMPERNI----VSWN 83
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
++SG+ + M EA +FE M +V +A+ G G V+ A
Sbjct: 84 GLVSGYIKNRMIEEARNVFEIMPERNVV--------------SWTAMVKGYVQEGMVVEA 129
Query: 178 DL------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+L ++E T + + G+ AR+ +D K D MI G R G
Sbjct: 130 ELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGK--DVVASTNMIGGLCREGR 187
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ A EIFD M++ N ++ +++ G VD A ++F +M P++
Sbjct: 188 VDEAREIFDEMRER----NVITWTTMITGYGQNKRVDVARKLFEVM-------PEKTEVS 236
Query: 292 CMVDLLGR--SGRLDEARELIRELPEPTVSVYHSLLGA 327
LLG SGR+++A E +P V ++++ A
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVA 274
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 42/193 (21%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+++S Y G P AR+ FD E+ + WN ++SGY +N E A +F++M +
Sbjct: 52 NSIVSGYFANGLPREARQMFD--EMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERN 109
Query: 247 V---------------------------KPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
V + N S+ + G +D A +++ MM
Sbjct: 110 VVSWTAMVKGYVQEGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMM-- 167
Query: 280 DFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
P ++ M+ L R GR+DEARE+ E+ E V + +++ + D+
Sbjct: 168 -----PGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDV- 221
Query: 338 EEMAMKLQEMEPE 350
A KL E+ PE
Sbjct: 222 ---ARKLFEVMPE 231
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 84/214 (39%), Gaps = 44/214 (20%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + GQ + AR+FFD K WN+++SGY NG A ++FD M +
Sbjct: 24 ISRLSRIGQINEARKFFDSLRYKA--IGSWNSIVSGYFANGLPREARQMFDEMPER---- 77
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDD------------------------FGLKP 285
N S+ ++S +++A +F +M + F P
Sbjct: 78 NIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRMP 137
Query: 286 KQEH------FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
++ FG ++D GR+D+AR+L +P V +++G D E
Sbjct: 138 ERNEVSWTVMFGGLID----GGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEARE 193
Query: 340 MAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+ EM N + + Y G + DV R
Sbjct: 194 I---FDEMRERNVITWTTMITGY-GQNKRVDVAR 223
>gi|225433481|ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510 [Vitis vinifera]
gi|298205226|emb|CBI17285.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 215/383 (56%), Gaps = 6/383 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ F + +CA+ G +H K S+ + ALVDMY KC + A ++F
Sbjct: 46 DAFVFPLALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLF 105
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GM 128
E+ RNI+ WN MI+ +GR A+ LFE + +P+ +T+N++ISG S L
Sbjct: 106 DEIP-HRNIVVWNAMISIYTHSGRVADALGLFEVM---DVEPNASTFNAIISGLSGLEDG 161
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
F+A + +M G+ +L + ++L AC DL+AL L KE HG+ IR ++ + +
Sbjct: 162 SFKALSFYRRMGEVGLKQNLITLLALLPACVDLAALTLIKEIHGYAIRNGIDPHPHLRSC 221
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y +CG ++ F + D W+++IS Y +G+ +A+E F+ M+ KV+
Sbjct: 222 LVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTALETFEQMEMAKVQ 281
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL AC HAG D+AL F M D+G++ +H+ C+VD L R+GRL EA E
Sbjct: 282 PDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYE 341
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P + T + +LLGAC + +L E L E+EP+N +V+L+ IYA +GR
Sbjct: 342 IIQGMPVKSTAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGR 401
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
E+ R+R+ +N+ + PG S
Sbjct: 402 HEEAQRMRREMNEMGVKAAPGSS 424
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 217/385 (56%), Gaps = 9/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ ++ +S IS+C+ L + +G+ HG L+ +S I AL+DMY+KC A +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ ++TWN+++AG + NG + A E FE + + +WN++ISG Q +
Sbjct: 395 FDRM-SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGSL 449
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F MQS G+ + S+ SAC L AL L K + ++ + + D + T
Sbjct: 450 FEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGT 509
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ M+ +CG P A F+ + D + W A I G E A+E+FD M ++ +
Sbjct: 510 TLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +FV L+AC H G V + +IF M G+ P+ H+GCMVDLLGR+G L+EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI ++P EP +++SLL AC N ++ A K+Q + PE +V+LSN+YA G
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW D+ ++R + ++ L K PG S+
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSS 712
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 71/345 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT + VISACA L L+ G +V+ + + ++ +ALVDMY+KC + A +
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E G+ N+ N M + + G + +A+ +F + G +PD +
Sbjct: 294 FDEY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS------------- 339
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ S +S+C+ L + GK HG+V+R +++ A
Sbjct: 340 ----------------------MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----------------- 231
LI MYMKC + A R FD+ K WN++++GY NGE
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 232 --------------YESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+E A+E+F MQ QE V + + +++ SACGH G +D A I+
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
++ + G++ +VD+ R G + A + L VS +
Sbjct: 496 IEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 44/321 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF +SACA G Q+HGL +K+ D + +LV Y +CG L A V
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKV 191
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W SMI G+++
Sbjct: 192 FDEM-SERNVVSWT-----------------------------------SMICGYARRDF 215
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M + + P+ + V+SACA L L+ G++ + + + + ++ M +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MYMKC A+R FD++ D NAM S Y R G A+ +F+LM V
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 248 KPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+P+ S ++ +S+C ++ K+ + + + G + ++D+ + R D
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRN---GFESWDNICNALIDMYMKCHRQDT 390
Query: 306 ARELIRELPEPTVSVYHSLLG 326
A + + TV ++S++
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVA 411
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+NS+I G++ G+ EA LF +M ++G+ P LSACA A G + HG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ KD + +L+ Y +CG+ AR+ FD E+ + W +MI GY R + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDA 219
Query: 236 VEI-FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
V++ F +++ E+V PNS + V V+SAC ++ +++ + + G++ +V
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALV 278
Query: 295 DLLGRSGRLDEARELIRE 312
D+ + +D A+ L E
Sbjct: 279 DMYMKCNAIDVAKRLFDE 296
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 214/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS+T ++V+ ACA + L+ G+Q+H +++ D I AL+DMY KCG L A N+
Sbjct: 241 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 300
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ RSEK D ++N++I G+SQ
Sbjct: 301 FE----------------------RSEK---------------DDVSYNTLILGYSQSPW 323
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FE+ LF++M+S G+ LSAC +LS K GKE H ++R L+ ++ +
Sbjct: 324 CFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNS 383
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G A + F++ I D A WN MI GYG +G+ + A E+F+LM+ + +
Sbjct: 384 LLDLYTKGGMLVTASKIFNK--ITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLD 441
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVL+AC H G VDK + F+ M ++P+Q H+ CMVDLLGR+G+L + E
Sbjct: 442 YDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAE 500
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+IR++P P S V+ +LLGAC H N +L + A L E++PE+ + ++ N+YA GR
Sbjct: 501 IIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGR 560
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + +IR+++ R++ K P S
Sbjct: 561 WNEANKIRKLMKSRKVQKNPAYS 583
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S+T S++ A L GR+VHG ++K D + +LVDMY K G L A +
Sbjct: 140 PGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTI 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++K RN+++ WN+MI+ Q G
Sbjct: 200 FEQMK-DRNVVS-----------------------------------WNAMIANLVQNGA 223
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+L MQ +G P+ + +VL ACA +++LK+GK+ H IR L D ++ A
Sbjct: 224 ETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ S AR F++ E D +N +I GY ++ ++ +F M+ +
Sbjct: 284 LIDMYSKCGQLSLARNIFERSE---KDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGID 340
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
++ SF+ LSAC + +I ++ L ++DL + G L A +
Sbjct: 341 YDAVSFMGALSACTNLSVFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGMLVTASK 399
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+ ++ + V+ +++++ H D+ E+
Sbjct: 400 IFNKITKKDVASWNTMILGYGMHGQIDIAFEL 431
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 141/324 (43%), Gaps = 42/324 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +SV+ AC + +FG +H L +K+ + + ALVDMY K G +
Sbjct: 40 NVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDV------- 92
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E +M++F+G+ + + +WNS I F G
Sbjct: 93 -------------------------EASMQVFDGM----LEQNEVSWNSAIGCFLNAGFY 123
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ ++F KM ++P ++S+L A +L + LG+E HG+ I+ ++ D +A +L
Sbjct: 124 GDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSL 183
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY K G A F+Q +K + WNAMI+ +NG A + MQ+ P
Sbjct: 184 VDMYAKFGSLEKASTIFEQ--MKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECP 241
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS + V VL AC + QI GL ++D+ + G+L AR +
Sbjct: 242 NSITLVNVLPACARMASLKMGKQIHA-WSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 300
Query: 310 IRELPEPTVSVYHSLLG---ACWC 330
+ VS +LG + WC
Sbjct: 301 FERSEKDDVSYNTLILGYSQSPWC 324
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 13/220 (5%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WNS++S F GM +A + M +G ++ + SV+ AC K G H
Sbjct: 5 DVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIH 64
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
++ LN ++A AL+ MY K G + + FD + + WN+ I + G
Sbjct: 65 ALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDG--MLEQNEVSWNSAIGCFLNAGF 122
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDFGLKPK 286
Y + +F M + V P S + ++L A G D I MD D +
Sbjct: 123 YGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA-- 180
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+VD+ + G L++A + ++ + V +++++
Sbjct: 181 ----NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIA 216
>gi|224084334|ref|XP_002307262.1| predicted protein [Populus trichocarpa]
gi|222856711|gb|EEE94258.1| predicted protein [Populus trichocarpa]
Length = 558
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 212/399 (53%), Gaps = 24/399 (6%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT ISV+ YL G +HG +K SD + AL+ Y KCG L +F E
Sbjct: 153 VTLISVLPVYCDRDYLGHGMTLHGHAIKKGFASDVSLVNALISTYCKCGDLDSGRFLF-E 211
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-------------------AHEGFKPD 112
+ R +++WN +I G+ +A+ LF + +H D
Sbjct: 212 VMSERCVVSWNALITGLRHLNLQNEALVLFSQMTEYQRPNSVTLLNVLPLCYSHLQGTKD 271
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
WN++IS Q +A F + G+ P V S++SACA L+ L L
Sbjct: 272 IPVWNAIISVHIQTKYPEKAVCFFYDLLRMGLQPDNITVLSLVSACAQLNFLSLAHSVMA 331
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+VI KD +++ ALI MY +CG A++ F+ K D W+ MI+GY +G+
Sbjct: 332 YVICKGFEKDSAVSNALIDMYARCGDIVTAKKLFEGLIEK--DAVSWSVMINGYCLHGDG 389
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
++A+EI MQ V PN F +LSAC HAG V++A + M ++ G+ + EH+ C
Sbjct: 390 KAALEILSQMQLSGVIPNVIVFSTILSACSHAGLVEQAWMVLNSMVEN-GISARIEHYAC 448
Query: 293 MVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+VDLLGR G L EA ++++LP +P+V++ SLLGAC H N ++GEE++ L EM+ +N
Sbjct: 449 LVDLLGRKGHLKEAYNVVKKLPGKPSVTLLESLLGACSVHGNVEIGEEISGLLFEMDADN 508
Query: 352 PTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P P+VILSNIYA GRW D ++R I+ R+L K G S
Sbjct: 509 PVPYVILSNIYAAAGRWADANKLRSNIDRRRLRKAAGCS 547
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 39/254 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++V+ +SV+SAC+ L + FG+ H +++ S + AL+ Y C L +
Sbjct: 48 SPDAVSIVSVLSACSYLEAVLFGKCAHAFSIRKGIDSSPNVSNALLAFYSDCRQLTSSFK 107
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ +RN ++WNT+I+G + +G EKA++L + EG D T
Sbjct: 108 LFHKMH-TRNTVSWNTLISGCVHSGEMEKAVDLGHSMQKEGVALDLVT------------ 154
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ SVL D L G HGH I+ D S+
Sbjct: 155 -----------------------LISVLPVYCDRDYLGHGMTLHGHAIKKGFASDVSLVN 191
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALIS Y KCG R F+ + WNA+I+G A+ +F M + +
Sbjct: 192 ALISTYCKCGDLDSGRFLFEVMSERC--VVSWNALITGLRHLNLQNEALVLFSQMTEYQ- 248
Query: 248 KPNSASFVAVLSAC 261
+PNS + + VL C
Sbjct: 249 RPNSVTLLNVLPLC 262
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 132/306 (43%), Gaps = 32/306 (10%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
KA LF+ +++ WN M+SG+ + + + F +MQ G P + SV
Sbjct: 2 HKAENLFDRISNRNL----LLWNVMVSGYVRNCLWDTSLAAFCEMQLGGFSPDAVSIVSV 57
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
LSAC+ L A+ GK H IR ++ +++ AL++ Y C Q + + + F + +
Sbjct: 58 LSACSYLEAVLFGKCAHAFSIRKGIDSSPNVSNALLAFYSDCRQLTSSFKLFHKMHTR-- 115
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA------CGHA---- 264
+ WN +ISG +GE E AV++ MQ+E V + + ++VL GH
Sbjct: 116 NTVSWNTLISGCVHSGEMEKAVDLGHSMQKEGVALDLVTLISVLPVYCDRDYLGHGMTLH 175
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
GH K G ++ + G LD R L + E V +++L
Sbjct: 176 GHAIKK-----------GFASDVSLVNALISTYCKCGDLDSGRFLFEVMSERCVVSWNAL 224
Query: 325 LGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI---YAGLGRWEDVGRIRQMINDR 381
+ HLN E + + Q E + P +L+ + Y+ L +D+ +I+
Sbjct: 225 ITGLR-HLNLQ-NEALVLFSQMTEYQRPNSVTLLNVLPLCYSHLQGTKDIPVWNAIISVH 282
Query: 382 QLTKLP 387
TK P
Sbjct: 283 IQTKYP 288
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+++T +S++SACA L +L V + + D+ + AL+DMY +CG + A
Sbjct: 304 QPDNITVLSLVSACAQLNFLSLAHSVMAYVICKGFEKDSAVSNALIDMYARCGDIVTAKK 363
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ L ++ ++W+ MI G L+G + A+E+ + G P+ +++++S S G
Sbjct: 364 LFEGLI-EKDAVSWSVMINGYCLHGDGKAALEILSQMQLSGVIPNVIVFSTILSACSHAG 422
Query: 128 MRFEAFKLFEKMQSTGM 144
+ +A+ + M G+
Sbjct: 423 LVEQAWMVLNSMVENGI 439
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 31/177 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGR---------QVHGLT-------------LKIEKQSD 45
PNSVT ++V+ C S +LQ + VH T L++ Q D
Sbjct: 249 RPNSVTLLNVLPLCYS--HLQGTKDIPVWNAIISVHIQTKYPEKAVCFFYDLLRMGLQPD 306
Query: 46 TMIGTALVDMYLKCGCLPCAHNVFQEL--KG-SRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ +LV + L AH+V + KG ++ N +I G A +LFE
Sbjct: 307 NITVLSLVSACAQLNFLSLAHSVMAYVICKGFEKDSAVSNALIDMYARCGDIVTAKKLFE 366
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
GL + D +W+ MI+G+ G A ++ +MQ +G++P++ +++LSAC+
Sbjct: 367 GL----IEKDAVSWSVMINGYCLHGDGKAALEILSQMQLSGVIPNVIVFSTILSACS 419
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 203/384 (52%), Gaps = 44/384 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ SV+ AC L L RQ+H +K +SD + +AL+D+Y K L A
Sbjct: 152 RPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALG 208
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ D WNS+I GF+Q
Sbjct: 209 VFDEMPTR------------------------------------DLVVWNSIIGGFAQNS 232
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF++M+ G + +TSVL AC L+ L+LG++ H HV++ D +D +
Sbjct: 233 DGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLKFD--QDLILNN 290
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A F + K D W+ M++G +NG A+E+F+ M++
Sbjct: 291 ALIDMYCKCGSLEDANSAFSRMVEK--DVISWSTMVAGLAQNGYSRQALELFESMKESGS 348
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN + + VL AC HAG V+K F M FG+ P +EH+GC++DLLGR+GRLDEA
Sbjct: 349 RPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAV 408
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI E+ EP + +LLGAC H N DL A K+ E+EPE+ +++LSNIYA
Sbjct: 409 KLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGTYILLSNIYANTQ 468
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV +R+ + +R + K PG S
Sbjct: 469 RWEDVAEVRKTMTNRGIRKTPGCS 492
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H VF + +T++ +I G ++ + E + +G++P N++++ + +
Sbjct: 49 HGVFAD------AITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVK 102
Query: 126 LGMRFEAFKLFEKMQSTGMV---------------PSLKCV---------------TSVL 155
+ EA LF++M +V +LKC+ +SVL
Sbjct: 103 FNLLEEAEDLFDEMPERNVVSWTTMISAYSNKLNDKALKCLILMFREGVRPNMFTYSSVL 162
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
AC L L ++ H +I+ L D + +ALI +Y K A FD E+ D
Sbjct: 163 RACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFD--EMPTRD 217
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN++I G+ +N + A+ +F M++ + A+ +VL AC ++ Q+
Sbjct: 218 LVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHV 277
Query: 276 MM---DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ D D L ++D+ + G L++A + E V + +++
Sbjct: 278 HVLKFDQDLILN------NALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAG 326
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 107 EGFKP------DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
+G KP DP+ + + F A + + M+ G+ + ++ C+
Sbjct: 8 KGMKPPLRYVADPSPLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSA 67
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
A++ GK H H+ + L++MY+K A FD E+ + W
Sbjct: 68 RGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFD--EMPERNVVSWT 125
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ---IFTMM 277
MIS Y N + A++ LM +E V+PN ++ +VL AC ++ + L I T +
Sbjct: 126 TMISAYS-NKLNDKALKCLILMFREGVRPNMFTYSSVLRACDGLPNL-RQLHCGIIKTGL 183
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ D ++ ++D+ + LD A + E+P + V++S++G
Sbjct: 184 ESDVFVR------SALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGG 227
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 217/386 (56%), Gaps = 9/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ ++ +S IS+C+ L + +G+ HG L+ +S I AL+DMY+KC A
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ ++TWN+++AG + NG + A E FE + + +WN++ISG Q
Sbjct: 394 IFDRM-SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQGS 448
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ EA ++F MQS G+ + S+ SAC L AL L K + ++ + + D +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+ M+ +CG P A F+ + D + W A I G E A+E+FD M ++
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+ +FV L+AC H G V + +IF M G+ P+ H+GCMVDLLGR+G L+EA
Sbjct: 567 LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEA 626
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI ++P EP +++SLL AC N ++ A K+Q + PE +V+LSN+YA
Sbjct: 627 VQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASA 686
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW D+ ++R + ++ L K PG S+
Sbjct: 687 GRWNDMAKVRLSMKEKGLRKPPGTSS 712
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 152/345 (44%), Gaps = 71/345 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT + VISACA L L+ G +V+ + + ++ +ALVDMY+KC + A +
Sbjct: 234 PNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRL 293
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E G+ N+ N M + + G + +A+ +F + G +PD +
Sbjct: 294 FDEY-GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS------------- 339
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ S +S+C+ L + GK HG+V+R +++ A
Sbjct: 340 ----------------------MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----------------- 231
LI MYMKC + A R FD+ K WN++++GY NGE
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIV 435
Query: 232 --------------YESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+E A+E+F MQ QE V + + +++ SACGH G +D A I+
Sbjct: 436 SWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYY 495
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
++ + G++ +VD+ R G + A + L VS +
Sbjct: 496 IEKN-GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 539
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 44/321 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF +SACA G Q+HGL +K+ D + +LV Y +CG L A V
Sbjct: 132 PDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKV 191
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W SMI G+++
Sbjct: 192 FDEM-SERNVVSWT-----------------------------------SMICGYARRDF 215
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M + + P+ + V+SACA L L+ G++ + + + + ++ M +
Sbjct: 216 AKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS 275
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MYMKC A+R FD++ D NAM S Y R G A+ +F+LM V
Sbjct: 276 ALVDMYMKCNAIDVAKRLFDEYGASNLD--LCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 248 KPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+P+ S ++ +S+C ++ K+ + + + G + ++D+ + R D
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRN---GFESWDNICNALIDMYMKCHRQDT 390
Query: 306 ARELIRELPEPTVSVYHSLLG 326
A + + TV ++S++
Sbjct: 391 AFRIFDRMSNKTVVTWNSIVA 411
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 103/198 (52%), Gaps = 4/198 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+NS+I G++ G+ EA LF +M ++G+ P LSACA A G + HG ++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ KD + +L+ Y +CG+ AR+ FD E+ + W +MI GY R + A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFD--EMSERNVVSWTSMICGYARRDFAKDA 219
Query: 236 VEI-FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
V++ F +++ E+V PNS + V V+SAC ++ +++ + + G++ +V
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS-GIEVNDLMVSALV 278
Query: 295 DLLGRSGRLDEARELIRE 312
D+ + +D A+ L E
Sbjct: 279 DMYMKCNAIDVAKRLFDE 296
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 215/384 (55%), Gaps = 6/384 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN V + +IS C + + G+Q+ +K+ I + ++ +Y CG + A
Sbjct: 327 EPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACL 386
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+ + N+ +WN +IAG + N ++AMELF + D +W++MISG++Q
Sbjct: 387 QFR-IGSKENVASWNALIAGYVRNRMIDRAMELFNEMPER----DVFSWSTMISGYTQNE 441
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF KM ++G+ P+ + SVLSA A LK G+ H +V + ++++
Sbjct: 442 QPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSA 501
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG + A F + K + WNA+I G +G +++IF +++ +
Sbjct: 502 AIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHI 561
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K N+ +F+ VL+AC H G V+ + F M + + P +H+GCMVDLLGR+GRL+EA
Sbjct: 562 KLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAE 621
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E+IR +P + V ++ +LL AC H N D+GE A L +EP + V+LSN+YA G
Sbjct: 622 EMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVLLSNMYADAG 681
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WED +R+ + ++ +LPG S
Sbjct: 682 KWEDAFLVRRAMQSHRMQRLPGYS 705
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 171/369 (46%), Gaps = 37/369 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VT +++SA + + R +HGL +K+ + ++ T L+ MY C L A +
Sbjct: 196 PNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEARAL 255
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +NI++WN M+ G G + A +FE + ++ D TW ++I G+ ++
Sbjct: 256 FDEMP-EKNIVSWNVMLNGYSKAGFVDSARVVFERIPNK----DLVTWGTIIDGYVRVER 310
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++ M S G P+ + ++S C A+ G++ V++ + + + +
Sbjct: 311 INEALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQST 370
Query: 189 LISMYMKCGQ----------------PSW--------ARRFFDQ----FEIKPDDPAF-W 219
+I +Y CG+ SW R D+ F P+ F W
Sbjct: 371 IIHLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSW 430
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ MISGY +N + A+E+F M +KPN + V+VLSA +G + + + +
Sbjct: 431 STMISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHN 490
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE--PTVSVYHSLLGACWCHLNSDLG 337
+ + ++D+ + G ++ A E+ E+ E TVS +++++ H +++L
Sbjct: 491 N-SITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLS 549
Query: 338 EEMAMKLQE 346
++ L+
Sbjct: 550 LKIFSDLER 558
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 184/374 (49%), Gaps = 24/374 (6%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+ +S + C+ L+L G+Q+H L K S+ I +L++MY KCG L A ++F
Sbjct: 67 LVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDV 126
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
S + +++N MI+G + +G+ + A ELF+ + +G ++ +MI GFSQ +
Sbjct: 127 CPRS-DPVSYNVMISGYVKSGQLDYACELFDEMPVKGC----VSYTTMIMGFSQNECWNQ 181
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF++M++ G+VP+ + +++SA + + + HG VI+ + ++T L+
Sbjct: 182 AVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLR 241
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY C AR FD E+ + WN M++GY + G +SA +F+ + + +
Sbjct: 242 MYCVCSSLVEARALFD--EMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDL---- 295
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL---GRSGRLDEARE 308
++ ++ +++AL ++ M G +P MVDL+ GR+ + E ++
Sbjct: 296 VTWGTIIDGYVRVERINEALMMYRSMISA-GWEPNDV---MMVDLISGCGRTMAMTEGQQ 351
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGE--EMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ + + Y + + HL + G E ++ + EN + + + AG
Sbjct: 352 LLSAVVKMGFDCY-DFIQSTIIHLYAACGRINEACLQFRIGSKENVASW---NALIAGYV 407
Query: 367 RWEDVGRIRQMIND 380
R + R ++ N+
Sbjct: 408 RNRMIDRAMELFNE 421
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 213/369 (57%), Gaps = 31/369 (8%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE------- 102
TA+VD Y K G + A +F + +N+++W MI+G + NG+ ++A LFE
Sbjct: 103 TAMVDGYAKIGEIEQARALFNCM-PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 161
Query: 103 --------GLAHEGFKP------------DPATWNSMISGFSQLGMRFEAFKLFEKMQST 142
G EG D A+WN+MI+G++Q G EA KL +M
Sbjct: 162 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 221
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
GM P + SVL+AC+ L++L+ G++TH V+++ S+ ALI+MY KCG +
Sbjct: 222 GMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDS 281
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
F Q I D WNAMI+ + R+G Y+ A+ F M+ +V+P+ +F+++LSACG
Sbjct: 282 ELAFRQ--IDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG 339
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVY 321
HAG V ++L F M + + + P+ EHF C+VD+L R G++++A ++I+E+P E ++
Sbjct: 340 HAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIW 399
Query: 322 HSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDR 381
+LL AC HLN LGE A K+ E+EP+N +V+LSNIYA G W +V R+R ++ ++
Sbjct: 400 GALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQ 459
Query: 382 QLTKLPGIS 390
+ K P S
Sbjct: 460 GVKKQPAYS 468
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 162/340 (47%), Gaps = 33/340 (9%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT+ +++ Y K GC + +F L ++N+++WN+MIAG + + R ++A + F+ +
Sbjct: 5 DTVSWNSIITGYWKNGCFDESKRLFG-LMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAM 63
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM------QSTGMVPSLKCVTSVLSAC 158
+ + A+WN+MISG + EA +LFE+M T MV + + A
Sbjct: 64 P----QRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 119
Query: 159 ADLSALKLGKET------HGHVIRADLNKDESM-----------ATALISMYMKCGQPSW 201
A + + G+V ++ E++ TA+I+ Y K G+
Sbjct: 120 ALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK 179
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A+ FDQ + D A WNAMI+GY +NG E A+++ M + ++P+ ++ ++VL+AC
Sbjct: 180 AKILFDQIPCR--DLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTAC 237
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
+ + + ++ G + + ++ + + G + ++ R++ P V +
Sbjct: 238 SSLASLQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSW 296
Query: 322 HSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
++++ A H + L M+ +EP+ T +LS
Sbjct: 297 NAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLS 336
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ISV++AC+SL LQ GR+ H L LK +S I AL+ MY KCG + +
Sbjct: 224 QPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSEL 283
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+++ ++++WN MIA +G ++A+ F + +PD T+ S++S G
Sbjct: 284 AFRQIDHP-DVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAG 342
Query: 128 MRFEAFKLFEKM-QSTGMVPS---LKCVTSVLS 156
E+ F M +S +VP C+ +LS
Sbjct: 343 KVHESLNWFNSMIESYKIVPRPEHFACLVDILS 375
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 20/182 (10%)
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D WN++I+GY +NG ++ + +F LM N S+ ++++ C +D+A Q F
Sbjct: 5 DTVSWNSIITGYWKNGCFDESKRLFGLMPT----KNVVSWNSMIAGCIEDERIDEAWQYF 60
Query: 275 TMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
M P++ + M+ L R R++EA L E+P V Y +++
Sbjct: 61 QAM-------PQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGY---- 109
Query: 333 NSDLGE-EMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ +GE E A L P+ N + ++ + Y G++++ + + + D+ + + +
Sbjct: 110 -AKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMI 168
Query: 391 AG 392
G
Sbjct: 169 TG 170
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 207/382 (54%), Gaps = 39/382 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T VI AC L LQ GR +H + K D + ALVDMY KC
Sbjct: 833 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKC-------- 884
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R I E A LF+ + D TW MI G+++ G
Sbjct: 885 --------REI----------------EDARFLFDKMXER----DLVTWTVMIGGYAECG 916
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ LF+KM+ G+VP + +V+ ACA L A+ + ++ R D + T
Sbjct: 917 NANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGT 976
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I M+ KCG AR FD+ E K + W+AMI+ YG +G+ A+++F +M + +
Sbjct: 977 AMIDMHAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 1034
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + V++L AC HAG V++ L+ F+ M +D+ ++ +H+ C+VDLLGR+GRLDEA
Sbjct: 1035 LPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEAL 1094
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI + E ++ + LGAC H + L E+ A L E++P+NP +++LSNIYA G
Sbjct: 1095 KLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAG 1154
Query: 367 RWEDVGRIRQMINDRQLTKLPG 388
RWEDV +IR +++ R+L K+PG
Sbjct: 1155 RWEDVAKIRDLMSQRRLKKIPG 1176
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 205/382 (53%), Gaps = 39/382 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T VI AC L LQ GR +H + K D + ALVDMY+KC
Sbjct: 157 RPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC-------- 208
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R I E A LF+ + D TW MI G+++ G
Sbjct: 209 --------REI----------------EDARFLFDKMQER----DLVTWTVMIGGYAECG 240
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ LFEKM+ G+VP + +V+ ACA L A+ + ++ R D + T
Sbjct: 241 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 300
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG AR FD+ E K + W+AMI+ YG +G+ A+++F +M +
Sbjct: 301 AMIDMYAKCGCVESAREIFDRMEEK--NVISWSAMIAAYGYHGQGRKALDLFPMMLSSGM 358
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + ++L AC HAG V++ L+ F+ M +D+ ++ +H+ C+VDLLGR+GRLDEA
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEAL 418
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ + E ++ + LGAC H + L E+ A L E++ +NP +V+LSNIYA G
Sbjct: 419 KLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAG 478
Query: 367 RWEDVGRIRQMINDRQLTKLPG 388
RWEDV +IR +++ R+L K PG
Sbjct: 479 RWEDVAKIRDLMSQRRLKKTPG 500
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 13/258 (5%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
NI+ N +I + A LF+G+ D +W+ M+ GF+++G F F
Sbjct: 93 NIVVANKLIYFYSYYRALDDAYGLFDGMCVR----DSVSWSVMVGGFAKVGDYINCFGTF 148
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++ G P + V+ AC DL L++G+ H V + L+ D + AL+ MY+KC
Sbjct: 149 RELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKC 208
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
+ AR FD+ + + D W MI GY G+ ++ +F+ M++E V P+ + V
Sbjct: 209 REIEDARFLFDKMQER--DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVT 266
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIREL 313
V+ AC G + KA ++DD K Q M+D+ + G ++ ARE+ +
Sbjct: 267 VVFACAKLGAMHKA----RIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRM 322
Query: 314 PEPTVSVYHSLLGACWCH 331
E V + +++ A H
Sbjct: 323 EEKNVISWSAMIAAYGYH 340
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 120/259 (46%), Gaps = 13/259 (5%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N++ N ++ + A LF+G+ D +W+ M+ GF+++G F
Sbjct: 768 QNLIVANKLVXFYSYYRALDDAYGLFDGMCVR----DSVSWSVMVGGFAKVGDYMNCFGT 823
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F ++ G P + V+ AC DL L++G+ H V + L+ D + AL+ MY K
Sbjct: 824 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGK 883
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
C + AR FD+ + D W MI GY G ++ +FD M++E V P+ + V
Sbjct: 884 CREIEDARFLFDK--MXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 941
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRE 312
V+ AC G + KA I DD K Q M+D+ + G ++ ARE+
Sbjct: 942 TVVFACAKLGAMHKARTI----DDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 997
Query: 313 LPEPTVSVYHSLLGACWCH 331
+ E V + +++ A H
Sbjct: 998 MEEKNVISWSAMIAAYGYH 1016
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 217/385 (56%), Gaps = 34/385 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAH 66
EP+ VT SV+SACASL L+ G Q+H +K K + D ++G ALVDMY KC + A
Sbjct: 245 EPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEAR 304
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + RN+++ +M++G + A +F + + +WN++I+G++Q
Sbjct: 305 RVFDRM-SIRNVVSETSMVSGYARAASVKAARFMFSKMTQR----NVVSWNALIAGYTQN 359
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA +LF ++ + P+ T G+++++D+ +
Sbjct: 360 GENEEALRLFRLLKRESIWPT--------------------HYTFGNLLKSDI----FVG 395
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MYMKCG R F++ +K D WNA+I GY +NG A++IF M
Sbjct: 396 NSLIDMYMKCGSIEDGSRVFEK--MKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 453
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP+ + + VL AC HAG V++ F M++ GL P ++H+ CMVDLLGR+G L+EA
Sbjct: 454 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-GLIPLKDHYTCMVDLLGRAGCLNEA 512
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ LI +P P V+ SLL AC H N ++G+ A KL E++P N P+V+LSN+YA L
Sbjct: 513 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAEL 572
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV R+R+++ + +TK PG S
Sbjct: 573 GRWGDVVRVRKLMRQQGVTKQPGCS 597
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 7/302 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS F ++ +C + R VH L + + I L+D+Y KC CL A +
Sbjct: 13 PNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKL 72
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN TWN++I+ + +G ++A LF + +PD +WNSM+SGF+Q
Sbjct: 73 FDRMP-QRNTFTWNSLISVLTKSGFLDEAARLFGSMP----EPDQCSWNSMVSGFAQHDR 127
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ + F KM + + S LSACA L L +G + H V ++ + D M +A
Sbjct: 128 FEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSA 187
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A F + + WN++I+ Y +NG A+E+F M ++
Sbjct: 188 LIDMYSKCGSVACAEEVFSG--MIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + +V+SAC + + LQI + + +VD+ + +++EAR
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 309 LI 310
+
Sbjct: 306 VF 307
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 32/211 (15%)
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
+P+ +L +C + + + H ++ + + + LI +Y KC AR+
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 205 FFDQ----------------------------FEIKPD-DPAFWNAMISGYGRNGEYESA 235
FD+ F P+ D WN+M+SG+ ++ +E +
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-CMV 294
+E F M +E N SF + LSAC ++ Q+ ++ + G ++
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSK--SRYSTDVYMGSALI 189
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D+ + G + A E+ + E + ++SL+
Sbjct: 190 DMYSKCGSVACAEEVFSGMIERNLVTWNSLI 220
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 73/155 (47%), Gaps = 23/155 (14%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQV------HGLTLKIEKQSDTMIGTALVDMYLKCG 60
++P+ VT I V+ AC+ ++ GR HGL + T +VD+ + G
Sbjct: 454 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHY------TCMVDLLGRAG 507
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS-- 118
CL A N+ + + + + + W +++A ++G +E+ + A + + DP WNS
Sbjct: 508 CLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN----IEMGKHAAEKLLEIDP--WNSGP 561
Query: 119 ---MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+ + +++LG + ++ + M+ G+ C
Sbjct: 562 YVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGC 596
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 214/384 (55%), Gaps = 42/384 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNV 68
N +T +SV+ A ++FGR +HG L+ + + D IG++LVDMY KCGC A V
Sbjct: 203 NEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKV 262
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ SRN++TW ++I+G+ Q G
Sbjct: 263 FDEMP-SRNVVTWT-----------------------------------ALIAGYVQ-GR 285
Query: 129 RFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
FE +FE+M + + P+ K ++SVLSACA + AL G+ H +VI+ + + ++ T
Sbjct: 286 CFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGT 345
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI Y KCG A F++ ++ + W AMI+G+ +G AV++F M V
Sbjct: 346 TLIDFYAKCGCLEEAILVFER--LREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHV 403
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+ VLSAC H G V++ ++F M + F L+PK +H+ CMVDL GR G L+EA+
Sbjct: 404 SPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAK 463
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI +P EPT +V+ +L G+C H + +LG+ A ++ +++P + + +L+N+Y+
Sbjct: 464 ALIERMPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQ 523
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+DV R+R+ + D+Q+ K PG S
Sbjct: 524 NWDDVARVRKQMKDQQVVKSPGCS 547
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 10/286 (3%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++ N++I+G G E +F+G + D +W +MI GF + EA F
Sbjct: 137 DLFVRNSLISGYSNCGLFEFGSRVFDGTEDK----DVVSWTAMIDGFVRNDSSLEAMTYF 192
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMATALISMYMK 195
+M+ +G+ + V SVL A ++ G+ HG + A + D + ++L+ MY K
Sbjct: 193 VEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGK 252
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A++ FD E+ + W A+I+GY + +E + +F+ M + V PN +
Sbjct: 253 CGCYDDAQKVFD--EMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLS 310
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+VLSAC H G + + ++ + + ++ ++D + G L+EA + L E
Sbjct: 311 SVLSACAHVGALHRGRRVHCYVIKN-SIEINTTVGTTLIDFYAKCGCLEEAILVFERLRE 369
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
V + +++ H + ++ M + P T V+LS
Sbjct: 370 KNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLS 415
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T SV+SACA + L GR+VH +K + +T +GT L+D Y KCGCL A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILV 363
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ L+ +N+ TW MI G +G + A++LF + P+ T+ ++S + G+
Sbjct: 364 FERLR-EKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGL 422
Query: 129 RFEAFKLFEKMQ 140
E +LF M+
Sbjct: 423 VEEGRRLFLSMK 434
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 111 PDPATWNSMISGFS---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
P W+S++ FS L R +F + +M+ G+VPS +L A L
Sbjct: 65 PSIQLWDSLVGHFSGRVTLNRRL-SFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDAN-P 122
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ H H+++ + D + +LIS Y CG + R FD E K D W AMI G+
Sbjct: 123 FQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDK--DVVSWTAMIDGFV 180
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
RN A+ F M++ V N + V+VL A A V I + ++
Sbjct: 181 RNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDV 240
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+VD+ G+ G D+A+++ E+P V + +L+
Sbjct: 241 FIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIA 279
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/387 (35%), Positives = 210/387 (54%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T ++V+SACA ++ GRQVH + I AL+D+Y KCG L
Sbjct: 232 RPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGEL----- 286
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LF+GL+++ D +WN++I G++ +
Sbjct: 287 ---------------------------ETACGLFQGLSNK----DVISWNTLIGGYTHMN 315
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF+ M +G P+ + S+LSACA L A+ +G+ H ++ + + S+
Sbjct: 316 LYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 375
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A++ FD + + WNAMI G+ +G +A +IF M++
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNR--SLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 433
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ +FV +LSAC H+G +D IF M D+ L PK EH+GCM+DL G SG E
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKE 493
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I + EP ++ SLL AC H N +LGE A L ++EPENP +V+LSNIYA
Sbjct: 494 AEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYAT 553
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
RW +V + R ++ND+ + K+PG S+
Sbjct: 554 AERWNEVAKTRALLNDKGMKKVPGCSS 580
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 192/381 (50%), Gaps = 16/381 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA + G+Q+HG LK D I T+L+ MY++ G L A V
Sbjct: 101 PNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ R+++++ +I G G E A ++F+ + D +WN+ ISG+++ G
Sbjct: 161 XDK-SSHRDVVSYTALITGYASRGXIESAHKMFDEIP----VKDVVSWNAXISGYAETGN 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF+KM T + P + +VLSACA +++LG++ H + + + A
Sbjct: 216 YKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNA 275
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG+ A F K D WN +I GY Y+ A+ +F M + K
Sbjct: 276 LIDLYSKCGELETACGLFQGLSNK--DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK 333
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +++LSAC H G +D I +D G+ ++D+ + G ++ A+
Sbjct: 334 PNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQ 393
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAG 364
++ + ++S +++++ H ++ ++ ++++ +EP++ T +LS ++G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453
Query: 365 LGRWEDVGR--IRQMINDRQL 383
+ D+GR R M D +L
Sbjct: 454 M---LDLGRHIFRSMTRDYKL 471
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 161/364 (44%), Gaps = 76/364 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF ++ +L WNTM G L+ DP +
Sbjct: 53 LPYAISVFDTIQ-EPXLLIWNTMFRGHALSS-------------------DPVS------ 86
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA A K G++ HG V++ +
Sbjct: 87 ----------ALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDL 136
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LISMY++ G+ A++ D+ EI
Sbjct: 137 DLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIP 196
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNA ISGY G Y+ A+E+F M + V+P+ ++ V VLSAC +G ++ Q
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ 256
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + ++D G + ++DL + G L+ A L + L V +++L+G + H+
Sbjct: 257 VHSWINDH-GFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGG-YTHM 314
Query: 333 NSDLGEEMAMKLQEM-----EPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
N L +E + Q+M +P + T ILS A LG D+GR + D++L +
Sbjct: 315 N--LYKEALLLFQDMLRSGEKPNDVTMLSILSAC-AHLGAI-DIGRWIHVYIDKRLKGVT 370
Query: 388 GISA 391
S+
Sbjct: 371 NASS 374
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
++PN VT +S++SACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 332 EKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 391
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + +R++ +WN MI G ++GR+ A ++F + G +PD T+ ++S S
Sbjct: 392 AQQVFDSML-NRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACS 450
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK 149
GM +F M + ++P L+
Sbjct: 451 HSGMLDLGRHIFRSMTRDYKLMPKLE 476
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 145/389 (37%), Positives = 211/389 (54%), Gaps = 45/389 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +SV+SAC L L+ G+ + + + ALVDMY KCG
Sbjct: 257 PNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG-------- 308
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E+ +R +LF+G+ + D WN+MI G+ L +
Sbjct: 309 --EIGTAR----------------------KLFDGMEDK----DVILWNTMIGGYCHLSL 340
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-----ADLNKDE 183
EA LFE M + P+ +VL ACA L AL LGK H ++ + ++N +
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN-NV 399
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S+ T++I MY KCG A + F + A WNAMISG NG E A+ +F+ M
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSR--SLASWNAMISGLAMNGHAERALGLFEEMI 457
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
E +P+ +FV VLSAC AG V+ + F+ M+ D+G+ PK +H+GCM+DLL RSG+
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
DEA+ L+ + EP +++ SLL AC H + GE +A +L E+EPEN +V+LSNIY
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIY 577
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
AG GRW+DV +IR +ND+ + K+PG ++
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTS 606
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 174/356 (48%), Gaps = 12/356 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF S+ +CA +Q+H LK+ + T+L+ MY + G L A V
Sbjct: 125 PNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLV 184
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+ +++ +I G + G + A LF+ + D +WN+MI+G+ Q G
Sbjct: 185 FDK-STLRDAVSFTALITGYVSEGHVDDARRLFDEIP----AKDVVSWNAMIAGYVQSGR 239
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +MQ + P+ + SVLSAC L +L+LGK V K+ + A
Sbjct: 240 FEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNA 299
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG+ AR+ FD E K D WN MI GY YE A+ +F++M +E V
Sbjct: 300 LVDMYSKCGEIGTARKLFDGMEDK--DVILWNTMIGGYCHLSLYEEALVLFEVMLRENVT 357
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQEHFGCMVDLLGRSGRLDE 305
PN +F+AVL AC G +D + +D + G + ++ + + G ++
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417
Query: 306 ARELIRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
A ++ R + +++ +++++ A H LG M + +P++ T +LS
Sbjct: 418 AEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLS 473
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 165/363 (45%), Gaps = 24/363 (6%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC-----AHNVFQELKGSR-NILTWNTM 84
+Q+H L +K + + L++ C P A ++F + NI WNT+
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEF---CALSPSRDLSYALSLFHSIHHQPPNIFIWNTL 98
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
I L ++ LF + H G P+ T+ S+ ++ EA +L +
Sbjct: 99 IRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLAL 158
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
TS++ + + L+ + V +D TALI+ Y+ G ARR
Sbjct: 159 HLHPHVHTSLIHMYSQVGELRHARL----VFDKSTLRDAVSFTALITGYVSEGHVDDARR 214
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FD EI D WNAMI+GY ++G +E A+ F MQ+ V PN ++ V+VLSACGH
Sbjct: 215 LFD--EIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL 272
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSL 324
++ I + + D G + +VD+ + G + AR+L + + V +++++
Sbjct: 273 RSLELGKWIGSWVRDR-GFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTM 331
Query: 325 LGACWCHLNSDLGEEMAMKLQEMEPENPTP----FVILSNIYAGLGRWEDVGRIRQMIND 380
+G +CHL+ L EE + + M EN TP F+ + A LG D+G+ D
Sbjct: 332 IGG-YCHLS--LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGAL-DLGKWVHAYID 387
Query: 381 RQL 383
+ L
Sbjct: 388 KNL 390
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 157/319 (49%), Gaps = 30/319 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS----DTMIGTALVDMYLKCGCLPC 64
PN VTF++V+ ACASL L G+ VH K K + + + T+++ MY KCGC+
Sbjct: 358 PNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEV 417
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF+ + GSR++ +WN MI+G+ +NG +E+A+ LFE + +EGF+PD T+ ++S +
Sbjct: 418 AEQVFRSM-GSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACT 476
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q G + F M + G+ P L+ ++ A K G++ ++ D
Sbjct: 477 QAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNM---EMEPDG 533
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ +L++ GQ + ++ FE++P++ + + + Y G ++ +I +
Sbjct: 534 AIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAKIRTKL 593
Query: 243 QQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD----L 296
+ +K P S +D + F + D P+ E+ M+D L
Sbjct: 594 NDKGMKKVPGCTSI-----------EIDGVVHEFLVGDK---FHPQSENIFRMLDEVDRL 639
Query: 297 LGRSGRLDEARELIRELPE 315
L +G + + E++ ++ E
Sbjct: 640 LEETGFVPDTSEVLYDMDE 658
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM--YMKCGQPSWARRFFDQFE 210
++L+ C D+ +LK + H +I++ L+ + LI S+A F
Sbjct: 30 NLLAKCPDIPSLK---QIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIH 86
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+P + WN +I + S++ +F M + PNS +F ++ +C + +A
Sbjct: 87 HQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEA 146
Query: 271 LQI 273
Q+
Sbjct: 147 KQL 149
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 213/386 (55%), Gaps = 12/386 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD----TMIGTALVDMYLKCGCLPCA 65
+ +T+ ++ISACA++ Q G+QVH LK E + + AL+ +Y K + A
Sbjct: 288 DDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEA 347
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + RNI+TWN +++G + GR E+A FE + + T MISG +Q
Sbjct: 348 RKIFYAMP-VRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNL----LTLTVMISGLAQ 402
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E KLF++M+ G P L+AC+ L AL+ G++ H ++ S+
Sbjct: 403 NGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSV 462
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A+ISMY KCG A F + D WN+MI+ G++G A+E+FD M +E
Sbjct: 463 GNAMISMYAKCGVVEAAESVF--VTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLKE 520
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ +F+ VL+AC HAG V+K F M + +G+ P ++H+ MVDL R+G
Sbjct: 521 GVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFSY 580
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR +I +P +P V+ +LL C H N DLG E A +L ++ P+N +V+LSNIYA
Sbjct: 581 ARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQNDGTYVLLSNIYAD 640
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+GRW +V ++R+++ D+ + K P S
Sbjct: 641 VGRWNEVAKVRKLMRDQAVRKEPACS 666
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 154/322 (47%), Gaps = 30/322 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS----DTMIGTALVDMYLK----- 58
P+ TF SV+SA +L++ +Q + + K + + AL+ +Y+K
Sbjct: 144 RPDDFTFTSVLSAL--VLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRASEL 201
Query: 59 ---CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
C + A +F E+ R+ LTW TMI G + N A E+FE + A
Sbjct: 202 GISCSAMVSARKLFDEMP-KRDELTWTTMITGYVRNDDLNGAREVFEAMVEN----LGAA 256
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+MISG+ G EA L KM+ G+ T+++SACA++ + ++GK+ H +++
Sbjct: 257 WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYIL 316
Query: 176 RADLNKDE----SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ +LN + S++ ALI++Y K + AR+ F ++ + WNA++SGY G
Sbjct: 317 KNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVR--NIITWNAILSGYVNAGR 374
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
E A F+ M + N + ++S G D+ L++F M D G +P F
Sbjct: 375 MEEAKSFFEEMPVK----NLLTLTVMISGLAQNGFGDEGLKLFKQMRLD-GFEPCDFAFA 429
Query: 292 CMVDLLGRSGRLDEARELIREL 313
+ G L+ R+L +L
Sbjct: 430 GALTACSVLGALENGRQLHAQL 451
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 47/277 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F ++AC+ L L+ GRQ+H + + +S +G A++ MY KCG + A +
Sbjct: 422 EPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAES 481
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + S ++++WN+MIA + +G KA+ELF+ + EG PD T+ ++++ S G
Sbjct: 482 VFVTMP-SVDLVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAG 540
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ + F M +S G+ P C D H R
Sbjct: 541 LVEKGRHYFNSMLESYGITP-----------CED------------HYAR---------- 567
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----YESAVEIFDLM 242
++ ++ + G S+AR D KP P W A+++G +G E+A ++F LM
Sbjct: 568 --MVDLFCRAGMFSYARIVIDSMPSKPGAPV-WEALLAGCRIHGNMDLGIEAAEQLFKLM 624
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q N ++V + + G ++ ++ +M D
Sbjct: 625 PQ-----NDGTYVLLSNIYADVGRWNEVAKVRKLMRD 656
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 144/327 (44%), Gaps = 21/327 (6%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
D + T L+ Y G L +F R+ + +N MI G NG A+ELF
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 104 LAHEGFKPDPATWNSMISGFSQ-LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + F+PD T+ S++S +G + ++ + TGM V + L +
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197
Query: 163 ALKLGKETHGHVIRADL-----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
A +LG V L +DE T +I+ Y++ + AR F+ + + A
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEA--MVENLGA 255
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WNAMISGY G ++ A+ + M+ ++ + ++ ++SAC + G Q+ +
Sbjct: 256 AWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYI 315
Query: 278 DDDFGLKPKQEHFGC------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ L P H C ++ L ++ ++DEAR++ +P + ++++L +
Sbjct: 316 LKN-ELNPN--HSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSG---Y 369
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVIL 358
+N+ EE +EM +N ++
Sbjct: 370 VNAGRMEEAKSFFEEMPVKNLLTLTVM 396
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%)
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
N D T LI+ Y G R F+ + D F+NAMI+GY NG+ SA+E+F
Sbjct: 76 NPDAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELF 135
Query: 240 DLMQQEKVKPNSASFVAVLSA 260
M+++ +P+ +F +VLSA
Sbjct: 136 RAMRRDDFRPDDFTFTSVLSA 156
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 220/416 (52%), Gaps = 40/416 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC L +++ G VHG ++ +S+T + L+ + CG L A
Sbjct: 75 RPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARA 134
Query: 68 VFQ---------------------ELKGSR---------NILTWNTMIAGMMLNGRSEKA 97
+F EL +R ++++WN MI G G E A
Sbjct: 135 LFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESA 194
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+LF+ E K D TWN+MI+G+ G +A ++FE+M+S G +P + S+LSA
Sbjct: 195 RKLFD----EVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSA 250
Query: 158 CADLSALKLGKETHGHVIRADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDD 215
C DL L G+ H + +D S + ALI MY KCG A F ++ D
Sbjct: 251 CTDLGDLDAGQRIHCCISEMGF-RDLSVLLGNALIDMYAKCGSIVRALEVFQG--MREKD 307
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+ WN+++ G +G E ++ +F M++ K++P+ +FV VL AC HAG V++ Q F
Sbjct: 308 VSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFD 367
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
+M D++ ++P H+GCMVDLLGR+G L+EA + I + EP V+ +LLGAC H N
Sbjct: 368 LMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNV 427
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LG M+L +M + +V+LSNIYA G W+ V ++R++++D + K G S
Sbjct: 428 ELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCS 483
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 70/294 (23%)
Query: 105 AHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
AH+ F +PD WN+MI G +Q A L+ +M++ + P VL AC
Sbjct: 31 AHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTR 90
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ----------------PSW--- 201
L +K+G HG V R + + LI + CG +W
Sbjct: 91 LCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSAL 150
Query: 202 ------------ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK- 248
AR+ FD+ +K D WN MI+GY + GE ESA ++FD + + V
Sbjct: 151 TAGYARRGELGVARQLFDEMPVK--DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVT 208
Query: 249 ------------------------------PNSASFVAVLSACGHAGHVDKALQIFTMMD 278
P+ + +++LSAC G +D +I +
Sbjct: 209 WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI- 267
Query: 279 DDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ G + G ++D+ + G + A E+ + + E VS ++S+LG H
Sbjct: 268 SEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 321
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 216/391 (55%), Gaps = 37/391 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M +C +PNSV+ S++SAC SL+YL G+ +H ++ + +S+ ++ TAL++MY KC
Sbjct: 305 MMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCN 364
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C ++ VF G S+K A WN+++
Sbjct: 365 CGNLSYKVFM---------------------GTSKK---------------RTAPWNALL 388
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
SGF Q + EA +LF++M + P S+L A A L+ L+ H ++IR+
Sbjct: 389 SGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFL 448
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+A+ L+ +Y KCG +A + F+ +K D W+A+I+ YG++G + AV++F+
Sbjct: 449 YRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFN 508
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M Q VKPN +F +VL AC HAG V++ +F M + +H+ CM+DLLGR+
Sbjct: 509 QMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRA 568
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GRL++A LIR +P P +V+ +LLGAC H N +LGE A ++EPEN +V+L+
Sbjct: 569 GRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVLLA 628
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA +GRW D R+R M+N+ L KLP S
Sbjct: 629 KLYAAVGRWGDAERVRDMVNEVGLRKLPAHS 659
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 116/254 (45%), Gaps = 38/254 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ VI AC L + G +HG T K SDT + L+ MY+ G A V
Sbjct: 111 PDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLV 170
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R +++WNTMI G N +E A+ ++ + G +PD AT
Sbjct: 171 FDPMQ-ERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCAT------------- 216
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
V SVL AC L ++LG+E H V + + A
Sbjct: 217 ----------------------VVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNA 254
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY+KCGQ A + K D W +I+GY NG+ SA+ + +MQ E VK
Sbjct: 255 LVDMYVKCGQMKEAWLLAKGMDDK--DVVTWTTLINGYILNGDARSALMLCGMMQCEGVK 312
Query: 249 PNSASFVAVLSACG 262
PNS S ++LSACG
Sbjct: 313 PNSVSIASLLSACG 326
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 39/302 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T +SV+ AC L ++ GR+VH L + + ++ ALVDMY+KCG + A
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + + ++++TW T+I G +LNG + A+ L + EG KP+ +
Sbjct: 271 LAKGMD-DKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVS------------ 317
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S+LSAC L L GK H IR + + + T
Sbjct: 318 -----------------------IASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVET 354
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY KC + + + F K P WNA++SG+ +N A+E+F M + V
Sbjct: 355 ALINMYAKCNCGNLSYKVFMGTSKKRTAP--WNALLSGFIQNRLAREAIELFKQMLVKDV 412
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ A+F ++L A + +A+ I + G + E +VD+ + G L A
Sbjct: 413 QPDHATFNSLLPAYAILADLQQAMNIHCYLIRS-GFLYRLEVASILVDIYSKCGSLGYAH 471
Query: 308 EL 309
++
Sbjct: 472 QI 473
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 18/295 (6%)
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCV 151
+ A LF+ L+ +P +WN+M+ + Q+G F+A LF +M +G +P
Sbjct: 61 HASYASHLFDKLS----QPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTY 116
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
V+ AC DLS + +G HG + + D + L++MYM G+ A+ FD +
Sbjct: 117 PVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQE 176
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WN MI+GY RN E AV ++ M V+P+ A+ V+VL ACG +V+
Sbjct: 177 RT--VISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGR 234
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++ T++ + G +VD+ + G++ EA L + + + V + +L+
Sbjct: 235 EVHTLVQEK-GFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYI-- 291
Query: 332 LNSDLGEEM----AMKLQEMEPENPTPFVILSN----IYAGLGRWEDVGRIRQMI 378
LN D + M+ + ++P + + +LS +Y G+ IRQ I
Sbjct: 292 LNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKI 346
>gi|29893615|gb|AAP06869.1| chloroplast import-associated channel protein homolog [Oryza sativa
Japonica Group]
Length = 1273
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 227/416 (54%), Gaps = 45/416 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+ + ACA L + GR +H L L + SD + TAL+DMY KCG + A VF E+
Sbjct: 856 TALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEM-A 914
Query: 75 SR------------------------------------NILTWNTMIAGMMLNGRSEKAM 98
SR +++TWN +++G L G A
Sbjct: 915 SRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAG 974
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRF-EAFKLFEKMQSTG--MVPSLKCVTSVL 155
+L + +GF+PD TW S +SG S L ++ A LF M G ++PS ++++L
Sbjct: 975 DLVGAMKDDGFQPDVVTWTSRVSG-SVLNFQYGRARALFRAMMVAGGRVLPSSATISTIL 1033
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A A+++ +K GKE HG+ + A + ++ ++++AL+ MY KCG ARR FD+ +
Sbjct: 1034 PAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQR--S 1091
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+MI G +G + AV +FD M ++ KP+ +F AVL+AC + G V+ ++
Sbjct: 1092 TVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYR 1151
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M ++G++P+ EH+ CMV LLGR+GRLDEA IR +P EP V+ +LLGAC H N
Sbjct: 1152 AMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNI 1211
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E A +L +EP+N ++LS+ A G+ +DV +I++++ R+L KL S
Sbjct: 1212 ELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYS 1267
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T +++ A A++ ++ G++VHG ++ + + + +ALVDMY KCG + A +
Sbjct: 1024 PSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRL 1083
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+ +TWN+MI G+ +G ++A+ LF+ + +G KPD T+ ++++ S GM
Sbjct: 1084 FDKMP-QRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGM 1142
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L+ MQ G+ P L+ C+ +L L E +G + L D
Sbjct: 1143 VEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLD------EAYGFIRAMPLEPDRF 1196
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + ++PD+ A + S G+ + +I L++
Sbjct: 1197 VWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVK 1256
Query: 244 QEKVK 248
+ ++K
Sbjct: 1257 RRRLK 1261
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLF---EKMQ--STGMV-PSLKCVTSVLSACADLSALKLG 167
++W ++ S+ G + +LF ++Q S G V P V + L ACA L+ + G
Sbjct: 811 SSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASG 870
Query: 168 KETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
+ H V+ R L D ATAL+ MY KCG + AR+ FD+ + DP WNA+++ Y
Sbjct: 871 RLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASR-GDPVVWNALLACY 929
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+G E A+ + M+ + P+ ++ V+S AG A + M DD G +P
Sbjct: 930 ARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDD-GFQP 987
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 199/331 (60%), Gaps = 7/331 (2%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A +F+++ R + +WNTMI G + NG+ E+A++ F ++++ + TW ++IS
Sbjct: 269 LDEAFKLFEQMP-ERELSSWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVIS 323
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G Q G EA K+F +MQ+ V P+ SVL AC+ L+AL G++ H + +
Sbjct: 324 GHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQ 383
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + +ALI+MY KCG+ AR+ FD I D WN MI+ Y +G A+ +FD
Sbjct: 384 EVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFD 443
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
MQ +P++ +++A+LSAC HAG VD+ L++F + D +K +++HF C+VDL GR+
Sbjct: 444 EMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRA 503
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GRL EA + I+ L +P+ SV+ +LL C H + DLG+ A KL E EPEN +++LS
Sbjct: 504 GRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLS 563
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYA G+W + +R + D+ L K PG S
Sbjct: 564 NIYASTGKWREAAGVRMKMKDKGLKKQPGCS 594
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 36/227 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF+SV+ AC+ L L G+Q+H + K Q + +AL++MY KCG L A
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARK 407
Query: 68 VFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + G R++++WN MIA +G KA+ LF+ + GF+PD T+ +++S S
Sbjct: 408 IFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHA 467
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ E KLFE + ++KL +E H
Sbjct: 468 GLVDEGLKLFENLVRD-------------------RSIKL-REDH--------------F 493
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
T L+ ++ + G+ A F E+KP + W A+++G +G +
Sbjct: 494 TCLVDLFGRAGRLQEAFDFIKGLEVKP-SASVWAALLAGCNVHGHID 539
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 32/280 (11%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + TA++ Y+KCG + A +F +N++TW +++G + R E+A LF+ +
Sbjct: 96 DVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAM 155
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA------- 157
+ +WN+MI G+++ G +A LFE M +V +T+ +
Sbjct: 156 P----VKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 158 ----------CADLSALKLGKETHGHVIRADLNKDESMATALIS---MYMKCGQPSWARR 204
+ + G +G + A L D+ ++S M + Q
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 205 FFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F FE P+ + + WN MI+G+ +NG+ E AV+ F M + N ++ AV+S
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVISGHVQ 327
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
G ++AL+IF+ M +KP + G V +LG +L
Sbjct: 328 DGRSEEALKIFSEMQAANNVKPNE---GTFVSVLGACSKL 364
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 61/303 (20%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+ L + C +P + ++ + N+ N +I + G+ +A ++FE +
Sbjct: 38 SILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDR-- 95
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +W ++I+G+ + GM EA LF+
Sbjct: 96 --DVVSWTAVITGYIKCGMIEEAKTLFD-------------------------------- 121
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
R D K+ TAL+S Y++ + ARR FD +K + WN MI GY R
Sbjct: 122 ------RNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVK--NVISWNTMIEGYARK 173
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE- 288
G + A+++F+ M + N S+ V++A VD+A ++F M P+++
Sbjct: 174 GWIDQALDLFEXMPER----NVVSWNTVITAFMQRRRVDEAQELFNRM-------PERDV 222
Query: 289 -HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+ MV L ++GR+D+AR L ++P V +++++ ++ D A KL E
Sbjct: 223 ISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLD----EAFKLFEQ 278
Query: 348 EPE 350
PE
Sbjct: 279 MPE 281
>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14050, mitochondrial; Flags: Precursor
gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 218/387 (56%), Gaps = 10/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F +++ ACA+L + GRQVH + E +D ++ ++LVDMY KCG L A
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N ++W M++G +GR E+A+ELF L + +W ++ISGF Q G
Sbjct: 162 VFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY----SWTALISGFVQSG 216
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EAF +F +M+ + + ++S++ ACA+L+A G++ HG VI + ++
Sbjct: 217 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFIS 276
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KC A+ F + ++ D W ++I G ++G+ E A+ ++D M
Sbjct: 277 NALIDMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 334
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +FV ++ AC H G V+K ++F M D+G++P +H+ C++DLLGRSG LDEA
Sbjct: 335 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 394
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNIYAG 364
LI +P P + +LL AC +G +A L + ++P+ +++LSNIYA
Sbjct: 395 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 454
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V R+ + + ++ K PG S+
Sbjct: 455 ASLWGKVSEARRKLGEMEVRKDPGHSS 481
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
NT++ G + A+++F+ + H D W S+++ +Q + + +F + S
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHR----DHIAWASVLTALNQANLSGKTLSVFSSVGS 97
Query: 142 TGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+ + P ++++ ACA+L ++ G++ H H I ++ DE + ++L+ MY KCG +
Sbjct: 98 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 157
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A+ FD +K + W AM+SGY ++G E A+E+F ++ + N S+ A++S
Sbjct: 158 SAKAVFDSIRVK--NTISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISG 211
Query: 261 CGHAGHVDKALQIFTMM 277
+G +A +FT M
Sbjct: 212 FVQSGKGLEAFSVFTEM 228
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L CA L K H H+++ + + +A L+++Y KCG S A + FD E+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFD--EMPHR 67
Query: 215 DPAFWNAMISGYGR-NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D W ++++ + N ++ + ++P+ F A++ AC + G +D Q+
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 274 F----------------TMMD---------------DDFGLKPKQEHFGCMVDLLGRSGR 302
+++D D +K + MV +SGR
Sbjct: 128 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKSGR 186
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+EA EL R LP + + +L+
Sbjct: 187 KEEALELFRILPVKNLYSWTALI 209
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 148/383 (38%), Positives = 202/383 (52%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ TF +VI + A L G +H D + ALV Y K G + A VF
Sbjct: 117 SNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVF 176
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ EK + WNSMISG+ Q G
Sbjct: 177 DKMP---------------------EKTV---------------VAWNSMISGYEQNGFG 200
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +LF MQ G+ P S+LSACA + A+ LG H ++ R + + + TAL
Sbjct: 201 KEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTAL 260
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG S AR FD E K + W AMISGYG +G A+E+F+ M + +P
Sbjct: 261 MNMYSRCGNVSKAREVFDSMEEK--NIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRP 318
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ +FVAVLSAC HAG VD+ QIFT M ++GL P EH CMVD+LGR+G L+EA +
Sbjct: 319 NNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQF 378
Query: 310 IRELP--EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ EP +V+ ++LGAC H N DLG E+A L +EPENP +V+LSNIYA GR
Sbjct: 379 IKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGR 438
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ V +IR ++ +L K G S
Sbjct: 439 MDRVEKIRNIMIRNRLKKEVGYS 461
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 10/261 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KPD ++S+I+ S+ E+ + +M + S ++V+ + ADL+A +G+
Sbjct: 80 KPDTFLFHSLITLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGET 139
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGR 228
H HV D + AL+S Y K G AR+ FD+ P+ WN+MISGY +
Sbjct: 140 IHCHVYICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKM---PEKTVVAWNSMISGYEQ 196
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD-FGLKPKQ 287
NG + AVE+F LMQ VKP+S++FV++LSAC G + + + + F L
Sbjct: 197 NGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVL 256
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQ 345
++++ R G + +ARE+ + E + + +++ H + E+ M
Sbjct: 257 G--TALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFD 314
Query: 346 EMEPENPTPFVILSN-IYAGL 365
P N T +LS +AGL
Sbjct: 315 GPRPNNVTFVAVLSACAHAGL 335
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 129/275 (46%), Gaps = 40/275 (14%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+S TF+S++SACA + + G VH + + ++GTAL++MY +CG +
Sbjct: 213 LGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVSK 272
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF ++ +NI+ W MI+G ++G +A+ELF ++ +G +P+ T+ +++S +
Sbjct: 273 AREVFDSME-EKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACA 331
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
G+ E ++F M Q G+VPS++
Sbjct: 332 HAGLVDEGRQIFTTMKQEYGLVPSVE---------------------------------- 357
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++ M + G + A +F K PA W AM+ + ++ VE+ + +
Sbjct: 358 -HQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLGACKMHKNFDLGVEVAEHLL 416
Query: 244 QEKVKP-NSASFVAVLSACGHAGHVDKALQIFTMM 277
++P N +V + + AG +D+ +I +M
Sbjct: 417 S--IEPENPGHYVMLSNIYALAGRMDRVEKIRNIM 449
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 211/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T ++++ AC+ + ++ G+Q+H ++ SD + AL+D+Y KCG L A ++
Sbjct: 413 PNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDI 472
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F RSEK D ++N++I G+SQ
Sbjct: 473 FD----------------------RSEK---------------DDVSYNTLIVGYSQSQC 495
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FE+ LF++M+S G+ LSACA+LSA K GKE HG ++R LN +A +
Sbjct: 496 CFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANS 555
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G + A + F++ I D A WN MI GYG +G+ + A E+FDLM+ + V
Sbjct: 556 LLDLYTKGGMLATASKIFNR--ITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVD 613
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVLSAC H G VD+ + F+ M +KP+Q H+ CMVDLLGR+G+L E+ E
Sbjct: 614 YDHVSYIAVLSACSHGGLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVE 672
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P S V+ +LLG+C H + +L A L E++PE+ + +L N+Y+ G
Sbjct: 673 IITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGM 732
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + I+ ++ R++ K P S
Sbjct: 733 WNEANEIKTLMKSRKVQKNPAYS 755
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 42/353 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SVT S++ A L Y G++VHG +++ +SD I +L+DMY K GCL A +
Sbjct: 312 PGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAI 371
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++G RN+++ WN+MI+ +Q G
Sbjct: 372 FENIEG-RNVVS-----------------------------------WNAMIANLAQNGA 395
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF L +MQ G P+ + ++L AC+ ++++K+GK+ H I L D ++ A
Sbjct: 396 ETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNA 455
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCGQ S A+ FD+ E D +N +I GY ++ ++ +F M+ ++
Sbjct: 456 LIDVYAKCGQLSVAQDIFDRSE---KDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIE 512
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
++ SF+ LSAC + + +I ++ L ++DL + G L A +
Sbjct: 513 YDAVSFMGCLSACANLSAFKQGKEIHGVLVRRL-LNTHPFLANSLLDLYTKGGMLATASK 571
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
+ + V+ +++++ H D+ E+ MK ++ ++ + +LS
Sbjct: 572 IFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLS 624
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 137/322 (42%), Gaps = 52/322 (16%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +SV+ AC + FG VHGL LK S +G ALVDMY K G L + VF
Sbjct: 212 NVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVF 271
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
NG EK + +WNS + F+ G
Sbjct: 272 ---------------------NGMQEK---------------NEVSWNSALGCFAHAGFH 295
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ ++F M + P ++S+L A DL LGKE HG+ IR + D +A +L
Sbjct: 296 EDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSL 355
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY K G A F+ E + + WNAMI+ +NG A + MQ+ P
Sbjct: 356 MDMYAKFGCLEKASAIFENIEGR--NVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECP 413
Query: 250 NSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
NS + V +L AC V QI ++M D F ++D+ + G+L
Sbjct: 414 NSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSN-------ALIDVYAKCGQL 466
Query: 304 DEARELIRELPEPTVSVYHSLL 325
A+++ + VS Y++L+
Sbjct: 467 SVAQDIFDRSEKDDVS-YNTLI 487
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 122/249 (48%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E ++V+F+ +SACA+L + G+++HG+ ++ + + +L+D+Y K G L A
Sbjct: 512 EYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASK 571
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +++ +WNTMI G ++G+ + A ELF+ + +G D ++ +++S S G
Sbjct: 572 IFNRIT-RKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGG 630
Query: 128 MRFEAFKLFEKMQSTGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ K F +M + + P C+ +L LS E+ + +
Sbjct: 631 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLS------ESVEIITNMPFPANSD 684
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G AR + FE+KP+ ++ + + Y +G + A EI LM+
Sbjct: 685 VWGALLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMK 744
Query: 244 QEKVKPNSA 252
KV+ N A
Sbjct: 745 SRKVQKNPA 753
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 104/220 (47%), Gaps = 13/220 (5%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WNS++S GM +A + M +G+ ++ + SV+ AC G H
Sbjct: 177 DIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVH 236
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
G V+++ L+ ++ AL+ MY K G + R F+ + K + WN+ + + G
Sbjct: 237 GLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEK--NEVSWNSALGCFAHAGF 294
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTM---MDDDFGLKPK 286
+E +E+F +M + +V P S + ++L A G H+ K + +++ M+ D +
Sbjct: 295 HEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIA-- 352
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
++D+ + G L++A + + V +++++
Sbjct: 353 ----NSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIA 388
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL-----GKET 170
WNS+ + G+ EA +++ M +G+ P + L A A + G E
Sbjct: 74 WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133
Query: 171 HGHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H +R L + A L++ Y G+ + ARR FD E+ D WN+++S N
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFD--EMPARDIVSWNSLVSALLTN 191
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E A M + + N AS V+V+ ACG L + ++ GL
Sbjct: 192 GMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKS-GLDSVVNL 250
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
+VD+ G+ G L+ + + + E ++S LG C+ H + E++ + M
Sbjct: 251 GNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALG-CFAH--AGFHEDVLEMFRVMSE 307
Query: 350 ENPTP-FVILSNIYAGL 365
TP V LS++ L
Sbjct: 308 HEVTPGSVTLSSLLPAL 324
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 214/379 (56%), Gaps = 8/379 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV+SAC++L + G QVH K+ +D +I +ALVDMY KC A +F +L
Sbjct: 307 TFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDL 366
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ IL N+MI GR + A ++F+ + + +WNSMI GFSQ EA
Sbjct: 367 QAYDTILL-NSMITVYSNCGRIDDARQIFDTMPSKSL----ISWNSMIVGFSQNACPIEA 421
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF +M G+ + V+SACA +S+L+LG++ L D+ ++T+L+
Sbjct: 422 LDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDF 481
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG R+ FD+ + P WN+M+ GY NG A+ +FD M+ V+P
Sbjct: 482 YCKCGLVEHGRKLFDRMMKSDEVP--WNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDI 539
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FV VLSAC H G V++ + F M D+ + P EH+ CMVDL R+G L++A LI +
Sbjct: 540 TFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQ 599
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P + S++ S+L C H N+ LG+++A ++ +++PEN +V LS IYA W
Sbjct: 600 MPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRS 659
Query: 372 GRIRQMINDRQLTKLPGIS 390
++R+++ D+++ K+PG S
Sbjct: 660 AQVRKLMYDKKIPKVPGCS 678
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 99/402 (24%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHNVFQELKGSR 76
+ +C + + GR +H L LK + IG L+ MY +C + A +F+E+ R
Sbjct: 13 LGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMP-KR 71
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N +WNTMI G + +G K++ELF+ + H+ D +WN +ISGF++ G A +LF
Sbjct: 72 NCFSWNTMIEGYLKSGSKGKSLELFDSMPHK----DAFSWNVVISGFAKEGNLEVARRLF 127
Query: 137 EKM----------------------QSTGMVPSLK------------CVTSVLSACADLS 162
+M ++ G+ L + +V+ AC +L
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF------DQFEI----- 211
AL GK+ H ++ ++ D + ++L+++Y KCG A D F +
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 212 ------KPDDP------------AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+ +D WN+MISGY N E A+E+F+ M+++ V+ + ++
Sbjct: 248 GYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 254 FVAVLSACGHAGHVDKALQI--------FT---MMDD---DFGLKPKQEHFGC------- 292
F +VLSAC G +D+ +Q+ FT ++D D K ++ C
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 293 ---------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
M+ + GR+D+AR++ +P ++ ++S++
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMI 409
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 41/346 (11%)
Query: 13 TFI--SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
TF+ +V+ AC +L L G+Q+H + E + D+++G++LV++Y KCG + A++V
Sbjct: 173 TFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLN 232
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGM 128
+K + + + +I+G GR A +F K + WNSMISG+
Sbjct: 233 LMK-EPDAFSLSALISGYASCGRMNDARRIF------CLKSNACVVLWNSMISGYVANNE 285
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF M+ G+ SVLSAC+ L + G + H HV + D + +A
Sbjct: 286 ALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSA 345
Query: 189 LISMYMKCGQPSWARRFFDQ----------------------------FEIKPDDPAF-W 219
L+ MY KC +P A + F F+ P W
Sbjct: 346 LVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISW 405
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N+MI G+ +N A+++F M + ++ + S V+SAC ++ QIF
Sbjct: 406 NSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARA-T 464
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL+ Q +VD + G ++ R+L + + ++S+L
Sbjct: 465 IIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSML 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 155 LSACADLSALKLGKETHGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
L +C + ++ G+ H +++ L+ S+ L+ MY +C A++ F++ P
Sbjct: 13 LGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEM---P 69
Query: 214 DDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
F WN MI GY ++G ++E+FD M + ++ S+ V+S G+++ A +
Sbjct: 70 KRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHK----DAFSWNVVISGFAKEGNLEVARR 125
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS-------VYHSLL 325
+F M G+ + M+ +GR EA L ++L + V +++
Sbjct: 126 LFNEMPWKNGIA-----WNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVV 180
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPF-VILSNIYAGLGRWEDVGRIRQMINDRQLT 384
GAC D G+++ ++ E E + L N+Y G + + ++ +
Sbjct: 181 GACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAF 240
Query: 385 KLPGISAG 392
L + +G
Sbjct: 241 SLSALISG 248
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQ-VHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+P +TF+ V+SAC ++ GR+ + + L + +VD+Y + G L A
Sbjct: 535 QPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAM 594
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRS 94
N+ +++ + W++++ G + +G +
Sbjct: 595 NLIEQMPLKADTSMWSSVLRGCVAHGNN 622
>gi|147816693|emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
Length = 531
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 207/386 (53%), Gaps = 11/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ C+ L + G+QVH +K DT I T+L+ MY K CL CA V
Sbjct: 121 PDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEGV 180
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E N+L N+MI+G M G EKA +F+ + D ATW+ MI+G+++ GM
Sbjct: 181 LAECS-QENVLAINSMISGYMSQGHVEKARAMFDKMG----AKDAATWSGMITGYTKNGM 235
Query: 129 RFEAFKLFEKM---QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
EA +F +M ++G+ P+ + S LSA A L AL G+ H ++ R ++
Sbjct: 236 HEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITL 295
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T L+ MY KCG + + F E++ D W M+SG+ +G+ ++FD M
Sbjct: 296 GTGLVDMYAKCGSIHCSYKLFR--EMQQRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAG 353
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN FVA+LSAC HAG+++ F M DFG++P EH+GCMVDLLGR+G+L E
Sbjct: 354 GTRPNEVIFVAILSACSHAGYLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLAE 413
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ELI +P EPT ++ +LL AC H + G +L ++EP + + +++
Sbjct: 414 AEELIISMPEEPTAVIWGALLSACRIHKDLRRGRRAFRQLMQLEPLRGDRYKLAGQMFSS 473
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G E+ + + I + +L G S
Sbjct: 474 AGEKEEADNVTRFIKENELETTRGSS 499
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +S +SA A L L GR +H +I + +GT LVDMY KCG + C++
Sbjct: 255 QPNESALVSSLSATACLGALDQGRWIHAYIRRIGAKISITLGTGLVDMYAKCGSIHCSYK 314
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E++ R+++TW M++G ++G++ K +LF+ + G +P+ + +++S S G
Sbjct: 315 LFREMQ-QRDVVTWGVMMSGFAMHGQARKCFQLFDEMVAGGTRPNEVIFVAILSACSHAG 373
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS 162
F +M + G+ PS++ C+ +L L+
Sbjct: 374 YLELGHHYFNQMVTDFGIRPSVEHYGCMVDLLGRAGQLA 412
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 129/284 (45%), Gaps = 13/284 (4%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
L+D Y+ + A VF + S ++ +N MI G+ L ++ L+ L G P
Sbjct: 63 LLDSYVSMSQIYYALLVFNRIP-SPDVFAYNAMIRGLTLGNCPYDSLLLYNKLLLGGLTP 121
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D T+ ++ S L FE ++ ++ G+ P TS++ A L +
Sbjct: 122 DNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTSLIHMYAKSDCLACAEG-- 179
Query: 172 GHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
+ A+ +++ +A ++IS YM G AR FD+ K D A W+ MI+GY +NG
Sbjct: 180 ---VLAECSQENVLAINSMISGYMSQGHVEKARAMFDKMGAK--DAATWSGMITGYTKNG 234
Query: 231 EYESAVEIFD---LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+E A+ +F ++ V+PN ++ V+ LSA G +D+ I + G K
Sbjct: 235 MHEEALVMFREMMMVSNSGVQPNESALVSSLSATACLGALDQGRWIHAYI-RRIGAKISI 293
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+VD+ + G + + +L RE+ + V + ++ H
Sbjct: 294 TLGTGLVDMYAKCGSIHCSYKLFREMQQRDVVTWGVMMSGFAMH 337
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 218/415 (52%), Gaps = 40/415 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S TF S++ AC+ + L FG VHG K S + TALVD Y G + A V
Sbjct: 8 PTSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRV 67
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-- 126
F E+ R++ W TMI+ G A +LF+ + + A+WN+MI G+S+L
Sbjct: 68 FDEMS-ERDVFAWTTMISVHARTGDMSSARQLFDEMPVR----NTASWNAMIDGYSRLRN 122
Query: 127 ----------------------------GMRF-EAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+F EA +F +MQ+ G+ P + +++SA
Sbjct: 123 VESAELLFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISA 182
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA L AL LGKE H + + + D + +ALI MY KCG + F F+++ +
Sbjct: 183 CAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVF--FKLRKKNLF 240
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN++I G +G E A+ +F MQ+EK+KPN +F++VL AC HAG V++ + F M
Sbjct: 241 CWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAGLVEEGRKRFLSM 300
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
DF + P+ EH+GCMVDLLG++G L++A EL+R + EP ++ +LLG C H N +
Sbjct: 301 SRDFSIPPEIEHYGCMVDLLGKAGLLEDALELVRSMRMEPNSVIWGALLGGCKLHRNLKI 360
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL-PGIS 390
+ + + +EP N + +L N+YA + RW +V IR + + + K PG S
Sbjct: 361 AQVAVNESKVLEPNNSGYYTLLVNMYAEVNRWSEVANIRATMKELGVEKTSPGSS 415
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT ++ISACA L L G+++H +++ D IG+AL+DMY KCG L +
Sbjct: 170 DPDEVTMATIISACAHLGALDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLV 229
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L+ +N+ WN++I G+ ++G +E+A+ +F + E KP+ T+ S++ + G
Sbjct: 230 VFFKLR-KKNLFCWNSIIEGLAVHGYAEEALAMFSRMQREKIKPNGVTFISVLGACTHAG 288
Query: 128 MRFEAFKLFEKMQSTGMVP 146
+ E K F M +P
Sbjct: 289 LVEEGRKRFLSMSRDFSIP 307
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 222/386 (57%), Gaps = 9/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + +++ ACASL L+ G+QVH + D ++ ++LVDMY KCG A +
Sbjct: 101 QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARS 160
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++ +W M++G +G ++AMELF +W ++ISG Q G
Sbjct: 161 VFDSILVKTSV-SWTAMLSGYARSGLKDEAMELFLRTPVRNL----YSWTALISGLVQSG 215
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ +F +M+ G+ + ++SV+ ACA+L+ L LGK+ HG VI + ++
Sbjct: 216 YCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFIS 275
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KC AR F++ + D W ++I G ++G + A++++D M +
Sbjct: 276 NALVDMYAKCSDILAARNVFNRMLHR--DVVSWTSIIVGAAQHGRAKEALDLYDQMVLAE 333
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KPN +FV ++ AC HAG V K ++F M +D+ + P + F C +DLL RSG L+EA
Sbjct: 334 IKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEA 393
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI+ +P +P + +LL AC H N+++G +A +L + P+ +V+LSN+YAG
Sbjct: 394 EDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSLNMHEPSTYVLLSNVYAGA 453
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G+WE + R+R+++ D ++ + PG S+
Sbjct: 454 GKWEQMSRVRKLMTDMEVKRKPGYSS 479
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 109/249 (43%), Gaps = 43/249 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
+++H +K + L+D Y KC L AH +F E+
Sbjct: 21 AKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMP---------------- 64
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSL 148
+ D +W S+++ ++Q + + +F M +T + P
Sbjct: 65 --------------------QRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDH 104
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
++L ACA L +L+LGK+ H + + D+ + ++L+ MY KCG PS AR FD
Sbjct: 105 FVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDS 164
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+K W AM+SGY R+G + A+E+F + V+ N S+ A++S +G+
Sbjct: 165 ILVKTS--VSWTAMLSGYARSGLKDEAMELF---LRTPVR-NLYSWTALISGLVQSGYCI 218
Query: 269 KALQIFTMM 277
+F M
Sbjct: 219 DGCYMFIEM 227
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L C A K+ H ++++ LN+ + + L+ Y KC A FD E+
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFD--EMPQR 66
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACG 262
D W ++++ Y + + IF M ++++P+ + +L AC
Sbjct: 67 DHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACA 115
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 203/386 (52%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +T +SV+ AC L L GR V G L+ + + ++ +G+AL+DMY KCG L A
Sbjct: 226 EPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARR 285
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + D TWN++I+G++Q G
Sbjct: 286 VFDSMPNK------------------------------------DVVTWNAIITGYAQNG 309
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF M+ G P + VLSAC+ + AL LGK H L D +A+
Sbjct: 310 ASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVAS 369
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK- 246
ALI MY KCG A R F+ K + WNAMIS +G+ + A+ +F M ++
Sbjct: 370 ALIDMYAKCGSLDDAVRVFESMPHK--NEVSWNAMISALAFHGQAQEALSLFRRMSKDNG 427
Query: 247 -VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+PN +F+ VLSAC HAG VD+ Q+F M+ FGL PK EH+ CMVDL R+G L E
Sbjct: 428 TVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYE 487
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A +LI+++P +P V SLLGAC N+D+GE + EME N +VI S IYA
Sbjct: 488 AWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYAN 547
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+ RW+D ++R ++ ++K PG S
Sbjct: 548 MRRWDDSAKMRVLMRQCGVSKTPGCS 573
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 167/363 (46%), Gaps = 44/363 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N+ T+ + AC ++ L G+ H L K D + +L+ MY +CG + A
Sbjct: 125 KANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARK 184
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ G R++++W NSMISG+S++G
Sbjct: 185 VFDEM-GDRDLVSW-----------------------------------NSMISGYSKMG 208
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M+ G P + SVL AC DL L LG+ G V+ + + M +
Sbjct: 209 FTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGS 268
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ARR FD K D WNA+I+GY +NG A+ +F+ M++
Sbjct: 269 ALIDMYGKCGDLISARRVFDSMPNK--DVVTWNAIITGYAQNGASNEAIVLFNGMREAGP 326
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + + VLSAC G +D + T + GL+ ++D+ + G LD+A
Sbjct: 327 HPDRVTMIEVLSACSTIGALDLGKWVETHASEK-GLQHDVYVASALIDMYAKCGSLDDAV 385
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILSN-IY 362
+ +P +++++ A H + L M+ ++P + T +LS ++
Sbjct: 386 RVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVH 445
Query: 363 AGL 365
AGL
Sbjct: 446 AGL 448
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 118/221 (53%), Gaps = 12/221 (5%)
Query: 110 KPDPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
KP+ +N M+ G + +++ +L+ K++S G+ + + AC ++ L GK
Sbjct: 89 KPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGK 148
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
H V +A L+ DE + +LI+MY +CG+ +AR+ FD E+ D WN+MISGY +
Sbjct: 149 IGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFD--EMGDRDLVSWNSMISGYSK 206
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G + A+ +F M++E +P+ + V+VL ACG G + + + F L+ K E
Sbjct: 207 MGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWV-----EGFVLEKKME 261
Query: 289 ---HFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ G ++D+ G+ G L AR + +P V +++++
Sbjct: 262 VNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAII 302
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 218/384 (56%), Gaps = 10/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT ++ ++AC+ L GR++H + S + AL+DMY+K GCL A N+
Sbjct: 145 PDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFS-LPVANALLDMYVKNGCLEEAVNL 203
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ SRN+++W T+++G G+ +KA LF H+ + D W +MI+ + Q G
Sbjct: 204 FEKMP-SRNVVSWTTLVSGYAFAGQVDKARLLF----HQCTEKDLIMWTAMINAYVQHGC 258
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF MQ + P V ++L+ CA+L AL G+ H ++ D + TA
Sbjct: 259 FIEALSLFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTA 318
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + F++ E + D W A+I G NG+ A+E+F+ M++ + K
Sbjct: 319 LIDMYAKCGHVEKSVEVFERMEGR--DTKAWTAIICGLATNGQAGRALELFEDMERSEAK 376
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VLSAC H G VD+ + F M + + ++P+ EH+ C+V+LLGR+G+LDEA +
Sbjct: 377 PDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEK 436
Query: 309 LIRELP--EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P + + ++ +L+ AC N + E + ++ + + P +++SN+YA
Sbjct: 437 LIKSIPINKDAMPLFGALITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNVYATAS 496
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R + + K G S
Sbjct: 497 RWEDVVRVRSKMAHPSVKKNAGCS 520
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 158/355 (44%), Gaps = 17/355 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ V+ A +L GR+ H TLK + D ++L+DMY G L A VF
Sbjct: 45 DSFTYPFVLRAIGALQISVEGRKAHAATLKTGFRWDAYTASSLMDMYTMLGRLEAARKVF 104
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ R ++ WN M+ + GR+ +A+ L E + PD T + ++ S+ G
Sbjct: 105 DEMP-QRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLTALTACSRAGDL 163
Query: 130 FEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
K+ M TG SL ++L D+ E ++ +++ T
Sbjct: 164 SLGRKIHAYMDGVTGF--SLPVANALL----DMYVKNGCLEEAVNLFEKMPSRNVVSWTT 217
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+S Y GQ AR F Q K D W AMI+ Y ++G + A+ +F MQ +++
Sbjct: 218 LVSGYAFAGQVDKARLLFHQCTEK--DLIMWTAMINAYVQHGCFIEALSLFRDMQMHQIE 275
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + V +L+ C + G +D+ Q+ + +K ++D+ + G ++++ E
Sbjct: 276 PDRFTVVTLLTCCANLGALDQG-QLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVE 334
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA----MKLQEMEPENPTPFVILS 359
+ + + +++ C N G + M+ E +P++ T +LS
Sbjct: 335 VFERMEGRDTKAWTAII--CGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLS 387
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 13/250 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T +++++ CA+L L G+ +H + D ++GTAL+DMY KCG + +
Sbjct: 275 EPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSVE 334
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++G R+ W +I G+ NG++ +A+ELFE + KPD T+ ++S G
Sbjct: 335 VFERMEG-RDTKAWTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCHGG 393
Query: 128 MRFEAFKLFEKMQST----GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E K F M+ V C+ ++L L E + +NKD
Sbjct: 394 LVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLD------EAEKLIKSIPINKDA 447
Query: 184 -SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG-YGRNGEYESAVEIFDL 241
+ ALI+ G + R + + N ++S Y +E V +
Sbjct: 448 MPLFGALITACKAQGNVKMSERLTKRIGKQGYQIPDVNLLMSNVYATASRWEDVVRVRSK 507
Query: 242 MQQEKVKPNS 251
M VK N+
Sbjct: 508 MAHPSVKKNA 517
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 4/209 (1%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N +I ++ + ++ ++ G+V VL A L G++ H ++
Sbjct: 15 NLLIRTLARRSSHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGRKAHAATLK 74
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D A++L+ MY G+ AR+ FD E+ WN M+ Y R G AV
Sbjct: 75 TGFRWDAYTASSLMDMYTMLGRLEAARKVFD--EMPQRAVVVWNMMLRCYVRCGRNTEAV 132
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+ + M++ ++ P+ + + L+AC AG + +I MD G + ++D+
Sbjct: 133 ALAEEMERGRLTPDRVTLLTALTACSRAGDLSLGRKIHAYMDGVTGFSLPVAN--ALLDM 190
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLL 325
++G L+EA L ++P V + +L+
Sbjct: 191 YVKNGCLEEAVNLFEKMPSRNVVSWTTLV 219
>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
gb|AF151215 and contains multiple PPR PF|01535 repeats
[Arabidopsis thaliana]
Length = 816
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 221/409 (54%), Gaps = 31/409 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T + AC + + G Q+HGL ++ + D +G +L+ MY K G + A VF
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE----------GF---------- 109
+K +++ ++WN++I G++ + +A ELFE + + GF
Sbjct: 334 GVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 110 -------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D TW +MIS F G EA F KM + P+ +SVLSA A L+
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L G + HG V++ ++ D S+ +L+SMY KCG + A + F I + +N M
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC--ISEPNIVSYNTM 510
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY NG + A+++F +++ +PN +F+A+LSAC H G+VD + F M +
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
++P +H+ CMVDLLGRSG LD+A LI +P +P V+ SLL A HL DL E A
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
KL E+EP++ TP+V+LS +Y+ +G+ D RI + +++ K PG S
Sbjct: 631 KKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSS 679
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF SV+SA ASL L G Q+HG +K+ +D + +LV MY KCG A+ +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + NI+++NTMI+G NG +KA++LF L G +P+ T+ +++S +G
Sbjct: 496 FSCI-SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 129 RFEAFKLFEKMQST 142
+K F+ M+S+
Sbjct: 555 VDLGWKYFKSMKSS 568
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE---KQSDTMIGTALVDMYLKCG 60
C E N+V++ ++I+ +++ GR L E K D++ L+ YL+ G
Sbjct: 137 CDIPEKNAVSYATMITG-----FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A VFQ + + +++ ++M+ G GR A LF+ + + TW +MI
Sbjct: 192 KWNEAVRVFQGM-AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMI 246
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL-SACADLSALKLGKETHGHVIRADL 179
G+ + G + F LF +M+ G V +V+ AC D + G + HG V R L
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+SMY K G A+ F +K D WN++I+G + + A E+F
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGV--MKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH--FGCMVDLL 297
+ M + + S+ ++ G + K +++F MM P++++ + M+
Sbjct: 365 EKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM-------PEKDNITWTAMISAF 413
Query: 298 GRSGRLDEA----RELIRELPEPTVSVYHSLLGA 327
+G +EA +++++ P + S+L A
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------- 102
+ + + G L A +F+++ +R+I++W MI+ NG+ KA ++F+
Sbjct: 57 ISKHARNGNLQEAEAIFRQM-SNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 103 --------------GLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
G A+E F + + ++ +MI+GF + G EA L+ +
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------ 169
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPSWAR 203
+K SV S L+ GK V + K+ ++++ Y K G+ AR
Sbjct: 170 -TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSAC 261
FD+ + + W AMI GY + G +E +F M+QE VK NS + + AC
Sbjct: 229 SLFDR--MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + + G A F Q + W AMIS Y NG+ A ++FD M
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR--SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS 114
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+A A++ + + KA ++F + + + + M+ R+GR DEA L
Sbjct: 115 YNAMITAMIK---NKCDLGKAYELFCDIPEKNAVS-----YATMITGFVRAGRFDEAEFL 166
Query: 310 IRELP 314
E P
Sbjct: 167 YAETP 171
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 133/390 (34%), Positives = 219/390 (56%), Gaps = 20/390 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T S++ AC L L+FG+ VH + + DT L++MY KCG L +
Sbjct: 219 KPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQE 278
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ-- 125
VF +K ++ ++WN+MI + NG+ ++++FE + D TWN++I+
Sbjct: 279 VFSGMK-CKDSVSWNSMINVYIQNGKMGDSLKVFENMKAR----DIITWNTIIASCVHSE 333
Query: 126 ---LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
LG+R + +M++ G+ P + + S+L C+ L+A + GKE HG + + L D
Sbjct: 334 DCNLGLR-----MISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD 388
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEI-KPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ LI MY KCG R F F++ K D W A+IS G GE + AV F
Sbjct: 389 VPVGNVLIEMYSKCGS---LRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGE 445
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ + P+ +FVA++ AC H+G V++ L F M D+ ++P+ EH+ C+VDLL RS
Sbjct: 446 MEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSA 505
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
LD+A + I +P +P S++ +LL AC ++++ E ++ ++ E+ P++ +V++SN
Sbjct: 506 LLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSN 565
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA LG+W+ V IR+ I R L K PG S
Sbjct: 566 IYAALGKWDQVRSIRKSIKARGLKKDPGCS 595
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 143/278 (51%), Gaps = 37/278 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ TF SVI+ACA LL + + +H L + SD IG AL+DMY + L A
Sbjct: 112 QPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARK 171
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ R++++WN++I+G NG +A+E++
Sbjct: 172 VFEEMP-LRDVVSWNSLISGYNANGYWNEALEIY-------------------------- 204
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++ KLF +M + P L +TS+L AC L L+ GK H ++I + D + +
Sbjct: 205 --YQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASN 261
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI+MY KCG ++ F + K D WN+MI+ Y +NG+ ++++F+ M+ +
Sbjct: 262 ILINMYAKCGNLLASQEVFSGMKCK--DSVSWNSMINVYIQNGKMGDSLKVFENMKARDI 319
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
++ ++++C H+ + L++ + M + G+ P
Sbjct: 320 ----ITWNTIIASCVHSEDCNLGLRMISRMRTE-GVTP 352
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 119/275 (43%), Gaps = 41/275 (14%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WNS+I + G+ EA L+ + Q + P SV++ACA L ++ K H V+
Sbjct: 83 WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D + ALI MY + AR+ F++ ++ D WN++ISGY NG + A
Sbjct: 143 DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLR--DVVSWNSLISGYNANGYWNEA 200
Query: 236 VEIFD------LMQQEKVKPNSASFVAVLSACGHAGHVD------------------KAL 271
+EI+ + + KP+ + ++L ACGH G ++ A
Sbjct: 201 LEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTAS 260
Query: 272 QIFTMMDDDFG-LKPKQEHF-----------GCMVDLLGRSGRLDEARELIRELPEPTVS 319
I M G L QE F M+++ ++G++ ++ ++ + +
Sbjct: 261 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDII 320
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+++++ +C + +LG M + M E TP
Sbjct: 321 TWNTIIASCVHSEDCNLGLRM---ISRMRTEGVTP 352
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 239/453 (52%), Gaps = 66/453 (14%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+++C++ PN TF ++ C + + G ++H LK + D + +L+ MY CG
Sbjct: 2 VRKCVA--PNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCG 59
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL---------------- 104
+ A +F E+ +++TWN+MI G + NG A ELFE +
Sbjct: 60 RIGDARAMF-EVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYV 118
Query: 105 -------AHEGFKPDP----ATWNSMISGFSQ---------------------------L 126
A + F P +WN MI G++Q L
Sbjct: 119 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 178
Query: 127 GMRF----EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNK 181
+R E ++F+KM M P+ + SVL+ACA L L GK H ++ +
Sbjct: 179 YVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEP 237
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D ++TAL++MY KCG AR FD+ + WN+MI GYG +G+ + A+E+F
Sbjct: 238 DVLLSTALLTMYAKCGAMDLARDVFDKMSNRS--VVSWNSMIMGYGMHGQADKALEMFLD 295
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ PN A+F+ VLSAC H+G + + F +M + ++PK EH+GCMVDLLGR+G
Sbjct: 296 MEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAG 355
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+ + ELIR++P E +++ +LL AC H NS+L E +A +L E+EP + P+++LSN
Sbjct: 356 LMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSN 415
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISAGI 393
IYA G+W+DV +R+M+ +R LTK G+S+ +
Sbjct: 416 IYAAEGKWDDVEIVRKMMKERGLTKTTGLSSSL 448
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 213/389 (54%), Gaps = 7/389 (1%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C S N+ TF ++ AC++L Q Q+H K D +L++ Y G
Sbjct: 103 CCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFK 162
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH +F ++ + ++WN++I G + G + A+ LF + K + +W +MISG+
Sbjct: 163 HAHLLFDRIQ-EPDAVSWNSVIKGYVKAGEMDMALTLFRKMPE---KNNAISWTTMISGY 218
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q GM EA +LF +MQ++ + P + S LSAC+ L AL+ GK H + + D
Sbjct: 219 VQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDS 278
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ LI MY KCG+ A F + K W A+ISGY +G A+ F MQ
Sbjct: 279 VLCCVLIDMYAKCGEMEEALGVFKNMKTK--SVQVWTALISGYAYHGLGREAISKFLEMQ 336
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
VKPN+ +F AVL+AC + G V++ +F ++ D+ LKP EH+GCMVDLLGR+G L
Sbjct: 337 NMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLL 396
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+EA I+++P +P ++ SLL AC H N +LGE++ L EM+ + +V ++NI+
Sbjct: 397 NEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVHMANIH 456
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +W+ R+++ ++ + K+PG SA
Sbjct: 457 AMGKKWDKAAETRRLMREQGVVKVPGCSA 485
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 150/346 (43%), Gaps = 18/346 (5%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+S + C + + L +Q+H LK D T + L AH+VF
Sbjct: 15 LSCLQKCPTEVEL---KQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVFFNGFD 71
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+ WN MI G+ + + ++++ L+ + + T+ ++ S L E +
Sbjct: 72 RPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQ 131
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-TALISMY 193
+ + G + V S++++ A K H H++ + + ++++ ++I Y
Sbjct: 132 IHAHITKFGYGHDIYAVNSLINSYAVTGNFK-----HAHLLFDRIQEPDAVSWNSVIKGY 186
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+K G+ A F + K ++ W MISGY + G + A+++F MQ V P++ S
Sbjct: 187 VKAGEMDMALTLFRKMPEK-NNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVS 245
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIR 311
+ LSAC G +++ I + + + + + C ++D+ + G ++EA + +
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKT---RTRIDSVLCCVLIDMYAKCGEMEEALGVFK 302
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
+ +V V+ +L+ H LG E K EM+ P I
Sbjct: 303 NMKTKSVQVWTALISGYAYH---GLGREAISKFLEMQNMGVKPNAI 345
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 215/383 (56%), Gaps = 8/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS TF ++ AC++L + +Q+H +K + +L+ +Y G + AH +F
Sbjct: 109 NSYTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLF 168
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+L +R+I++WN MI G + G + A ++F+ + + + +W +MI GF ++GM
Sbjct: 169 NQLP-TRDIVSWNIMIDGYIKFGNLDMAYKIFQAMPEK----NVISWTTMIVGFVRIGMH 223
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA L ++M G+ P ++ LSACA L AL+ GK H ++ + ++ D + L
Sbjct: 224 KEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVL 283
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
MY+KCG+ A F + E K W A+I G +G+ A++ F MQ+ + P
Sbjct: 284 TDMYVKCGEMEKALLVFSKLEKKC--VCAWTAIIGGLAIHGKGREALDWFTQMQKAGINP 341
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS +F A+L+AC HAG ++ +F M + +KP EH+GCMVDL+GR+G L EARE
Sbjct: 342 NSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREF 401
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P +P +++ +LL AC H + +LG+E+ L E++P++ ++ L++IYA G W
Sbjct: 402 IESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSGRYIHLASIYAAAGEW 461
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
V R+R I R L PG S+
Sbjct: 462 NQVVRVRSQIKHRGLLNHPGCSS 484
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 126/271 (46%), Gaps = 47/271 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S+T +SACA L L+ G+ +H K E + D ++G L DMY+KCG + A
Sbjct: 239 KPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALL 298
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L+ + + W +I G+ ++G+ +A++ F + G P+ T+ ++++ S G
Sbjct: 299 VFSKLE-KKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAG 357
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E LFE M S + PS++ C+ ++ RA L K+
Sbjct: 358 LTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMG-------------------RAGLLKE- 397
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AR F + +KP + A W A+++ + +E EI ++
Sbjct: 398 ------------------AREFIESMPVKP-NAAIWGALLNACQLHKHFELGKEIGKILI 438
Query: 244 QEKVKPN-SASFVAVLSACGHAGHVDKALQI 273
+ + P+ S ++ + S AG ++ +++
Sbjct: 439 E--LDPDHSGRYIHLASIYAAAGEWNQVVRV 467
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 139/358 (38%), Gaps = 79/358 (22%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN- 67
PN+ +++ C+++ L Q+HG LK + + + L+ Y + + A+
Sbjct: 8 PNTEQTQALLERCSNMKELM---QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTR 64
Query: 68 -VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + S N + WNTM+ + E A+ L+ + H + T+
Sbjct: 65 VVFDSIS-SPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTF---------- 113
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
P L L AC+ LSA + ++ H H+I+ +
Sbjct: 114 -------------------PFL------LKACSALSAFEETQQIHAHIIKRGFGLEVYAT 148
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L+ +Y G A F+Q + D WN MI GY + G + A +IF M ++
Sbjct: 149 NSLLRVYAISGNIQSAHVLFNQLPTR--DIVSWNIMIDGYIKFGNLDMAYKIFQAMPEKN 206
Query: 247 V-------------------------------KPNSASFVAVLSACGHAGHVDKALQIFT 275
V KP+S + LSAC G +++ I T
Sbjct: 207 VISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGALEQGKWIHT 266
Query: 276 MMD-DDFGLKPKQEHFGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++ ++ + P GC + D+ + G +++A + +L + V + +++G H
Sbjct: 267 YIEKNEIKIDPV---LGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAIIGGLAIH 321
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG--QPSWAR 203
P+ + ++L C+++ L + HG +++ +++ + L+ Y + ++ R
Sbjct: 8 PNTEQTQALLERCSNMKELM---QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTR 64
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD I + WN M+ Y + + E+A+ ++ M V NS +F +L AC
Sbjct: 65 VVFD--SISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSA 122
Query: 264 AGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
++ QI ++ FGL+ + ++ + SG + A L +LP + ++
Sbjct: 123 LSAFEETQQIHAHIIKRGFGLEVYATN--SLLRVYAISGNIQSAHVLFNQLPTRDIVSWN 180
Query: 323 SLLGACWCHLNSDLGEEMAMKLQEMEPE 350
++ N D MA K+ + PE
Sbjct: 181 IMIDGYIKFGNLD----MAYKIFQAMPE 204
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 224/452 (49%), Gaps = 70/452 (15%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P+ TF ++ C+ L L G Q+H L +K S + L+ MY CG + A
Sbjct: 119 SVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVA 178
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL--------------------- 104
VF E+ RN+ TWN+M AG +G E+ ++LF +
Sbjct: 179 RRVFDEM-SERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGR 237
Query: 105 --------------AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEK------------ 138
+G K +P S++ +++ G A +LF++
Sbjct: 238 LADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAM 297
Query: 139 -------------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
MQ + P+ + S+LS+CA L AL+ GK H + + +
Sbjct: 298 ISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRM 357
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
++ TAL+ Y KCG + F + +K + W +I G NG+ + A+E F
Sbjct: 358 KLTVTLGTALMDFYAKCGSVESSIEVFGKMPVK--NVLSWTVLIQGLASNGQGKKALEYF 415
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
LM ++ V+PN +F+ VLSAC HAG VD+ +F M DFG++P+ EH+GCMVD+LGR
Sbjct: 416 YLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGR 475
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+G ++EA + I+ +P +P ++ +LL +C H N ++GEE +L +EP + +++L
Sbjct: 476 AGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILL 535
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SNIYA +GRWED ++R + ++ + K PG S
Sbjct: 536 SNIYASVGRWEDALKVRGEMKEKGIKKTPGCS 567
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 17/291 (5%)
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV 145
A ++L + A+ +F + +PD +N MI GF+ EA LF++M +
Sbjct: 66 AAILLPTSMDYAVSIFRQID----EPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQ 121
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
P +L C+ L AL G++ H +++ + LI MY CG+ ARR
Sbjct: 122 PDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRV 181
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
FD E+ + WN+M +GY ++G +E V++F M + ++ + + V+VL+ACG
Sbjct: 182 FD--EMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLA 239
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ I +++ GLK +VD+ + G++D AR L ++ V + +++
Sbjct: 240 DLELGEWINRYVEEK-GLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMI 298
Query: 326 G----ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN--IYAGL--GRW 368
A C DL E M+ ++P T ILS+ + L G+W
Sbjct: 299 SGYSQASRCREALDLFHE--MQKANIDPNEITMVSILSSCAVLGALETGKW 347
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/426 (33%), Positives = 229/426 (53%), Gaps = 40/426 (9%)
Query: 3 ECLSDEPNSVTFI--SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ L+D+ ++ F+ SV+ AC + +G QVH L LK + D + +AL+ MY KCG
Sbjct: 122 QTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCG 181
Query: 61 CLPCAHNVFQ---------------------------------ELKGSR-NILTWNTMIA 86
+ A VF +L G N++TWN +I+
Sbjct: 182 EVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALIS 241
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G E E+F + + +PD +W S++SGF Q EAF F+KM G P
Sbjct: 242 GFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCP 301
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ ++++L ACA + ++ GKE HG+ + + D + +AL+ MY KCG S AR F
Sbjct: 302 TSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGFISEARTLF 361
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV-KPNSASFVAVLSACGHAG 265
+++ + N+MI GY +G E A+E+F+ M+ E V K + +F A L+AC H G
Sbjct: 362 --YKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVG 419
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSL 324
++ ++F +M + + ++P+ EH+ CMVDL GR+G+L+EA +I+ +P +P + V+ +L
Sbjct: 420 DIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGAL 479
Query: 325 LGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
L AC H + +L E A L E+EPE+ ++LS++YA G W V RI++ I +L
Sbjct: 480 LAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLR 539
Query: 385 KLPGIS 390
KL G+S
Sbjct: 540 KLQGLS 545
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 150/344 (43%), Gaps = 51/344 (14%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L EP S + +I LQ G+++H L +I + L+ +Y CG L
Sbjct: 25 LRSEPES--YAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSI 82
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F ++ + NI W +IA +
Sbjct: 83 ARKLFDKIPQT-NIHRWIALIATC-----------------------------------A 106
Query: 125 QLGMRFEAFKLFEKMQSTG--MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ G A ++F +MQ+ S+ + SVL AC + G++ H V++ D
Sbjct: 107 RCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEID 166
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+++ALI MY KCG+ AR+ FD +K D NA++SGY + G A+ + + M
Sbjct: 167 AFVSSALIVMYSKCGEVRDARKVFDGMVVK--DLVAMNAVVSGYAQQGLPNEALSLVENM 224
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKAL--QIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ V PN ++ A++S G A D+ + +IF +M++D ++P + ++ ++
Sbjct: 225 KLMGVNPNVVTWNALIS--GFAQKCDREMVSEIFRLMNED-RVEPDVVSWTSVLSGFVQN 281
Query: 301 GRLDEARELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEM 340
R +EA + +++ PT + +LL AC G+E+
Sbjct: 282 FRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEI 325
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 199/331 (60%), Gaps = 7/331 (2%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A +F+++ R + +WNTMI G + NG+ E+A++ F ++++ + TW ++IS
Sbjct: 269 LDEAFKLFEQMP-ERELSSWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVIS 323
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G Q G EA K+F +MQ+ V P+ SVL AC+ L+AL G++ H + +
Sbjct: 324 GHVQDGRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQ 383
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + +ALI+MY KCG+ AR+ FD I D WN MI+ Y +G A+ +FD
Sbjct: 384 EVADVVSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFD 443
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
MQ +P++ +++A+LSAC HAG VD+ L++F + D +K +++HF C+VDL GR+
Sbjct: 444 EMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRA 503
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GRL EA + I+ L +P+ SV+ +LL C H + DLG+ A KL E EPEN +++LS
Sbjct: 504 GRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLS 563
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYA G+W + +R + D+ L K PG S
Sbjct: 564 NIYASTGKWREAAGVRMKMKDKGLKKQPGCS 594
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 36/227 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN TF+SV+ AC+ L L G+Q+H + K Q + +AL++MY KCG L A
Sbjct: 348 KPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARK 407
Query: 68 VFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + G R++++WN MIA +G KA+ LF+ + GF+PD T+ +++S S
Sbjct: 408 IFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHA 467
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ E KLFE + ++KL +E H
Sbjct: 468 GLVDEGLKLFENLVRD-------------------RSIKL-REDH--------------F 493
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
T L+ ++ + G+ A F E+KP + W A+++G +G +
Sbjct: 494 TCLVDLFGRAGRLQEAFDFIKGLEVKP-SASVWAALLAGCNVHGHID 539
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 32/280 (11%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + TA++ Y+KCG + A +F +N++TW +++G + R E+A LF+ +
Sbjct: 96 DVVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAM 155
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA------- 157
+ +WN+MI G+++ G +A LFEKM +V +T+ +
Sbjct: 156 P----VKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQ 211
Query: 158 ----------CADLSALKLGKETHGHVIRADLNKDESMATALIS---MYMKCGQPSWARR 204
+ + G +G + A L D+ ++S M + Q
Sbjct: 212 ELFNRMPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDE 271
Query: 205 FFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F FE P+ + + WN MI+G+ +NG+ E AV+ F M + N ++ AV+S
Sbjct: 272 AFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNK----NVVTWTAVISGHVQ 327
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
G ++AL+IF+ M +KP + G V +LG +L
Sbjct: 328 DGRSEEALKIFSEMQAANNVKPNE---GTFVSVLGACSKL 364
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 61/303 (20%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+ L + C +P + ++ + N+ N +I + G+ +A ++FE +
Sbjct: 38 SILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDR-- 95
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +W ++I+G+ + GM EA LF+
Sbjct: 96 --DVVSWTAVITGYIKCGMIEEAKTLFD-------------------------------- 121
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
R D K+ TAL+S Y++ + ARR FD +K + WN MI GY R
Sbjct: 122 ------RNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMPVK--NVISWNTMIEGYARK 173
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE- 288
G + A+++F+ M + N S+ V++A VD+A ++F M P+++
Sbjct: 174 GWIDQALDLFEKMPER----NVVSWNTVITAFMQRRRVDEAQELFNRM-------PERDV 222
Query: 289 -HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+ MV L ++GR+D+AR L ++P V +++++ ++ D A KL E
Sbjct: 223 ISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLD----EAFKLFEQ 278
Query: 348 EPE 350
PE
Sbjct: 279 MPE 281
>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
Length = 839
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 221/409 (54%), Gaps = 31/409 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T + AC + + G Q+HGL ++ + D +G +L+ MY K G + A VF
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE----------GF---------- 109
+K +++ ++WN++I G++ + +A ELFE + + GF
Sbjct: 334 GVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 110 -------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D TW +MIS F G EA F KM + P+ +SVLSA A L+
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L G + HG V++ ++ D S+ +L+SMY KCG + A + F I + +N M
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC--ISEPNIVSYNTM 510
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY NG + A+++F +++ +PN +F+A+LSAC H G+VD + F M +
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
++P +H+ CMVDLLGRSG LD+A LI +P +P V+ SLL A HL DL E A
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
KL E+EP++ TP+V+LS +Y+ +G+ D RI + +++ K PG S
Sbjct: 631 KKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSS 679
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF SV+SA ASL L G Q+HG +K+ +D + +LV MY KCG A+ +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + NI+++NTMI+G NG +KA++LF L G +P+ T+ +++S +G
Sbjct: 496 FSCI-SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 129 RFEAFKLFEKMQST 142
+K F+ M+S+
Sbjct: 555 VDLGWKYFKSMKSS 568
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE---KQSDTMIGTALVDMYLKCG 60
C E N+V++ ++I+ +++ GR L E K D++ L+ YL+ G
Sbjct: 137 CDIPEKNAVSYATMITG-----FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A VFQ + + +++ ++M+ G GR A LF+ + + TW +MI
Sbjct: 192 KWNEAVRVFQGM-AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMI 246
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL-SACADLSALKLGKETHGHVIRADL 179
G+ + G + F LF +M+ G V +V+ AC D + G + HG V R L
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+SMY K G A+ F +K D WN++I+G + + A E+F
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGV--MKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH--FGCMVDLL 297
+ M + + S+ ++ G + K +++F MM P++++ + M+
Sbjct: 365 EKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM-------PEKDNITWTAMISAF 413
Query: 298 GRSGRLDEA----RELIRELPEPTVSVYHSLLGA 327
+G +EA +++++ P + S+L A
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------- 102
+ + + G L A +F+++ +R+I++W MI+ NG+ KA ++F+
Sbjct: 57 ISKHARNGNLQEAEAIFRQM-SNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 103 --------------GLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
G A+E F + + ++ +MI+GF + G EA L+ +
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------ 169
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPSWAR 203
+K SV S L+ GK V + K+ ++++ Y K G+ AR
Sbjct: 170 -TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSAC 261
FD+ + + W AMI GY + G +E +F M+QE VK NS + + AC
Sbjct: 229 SLFDR--MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 10/125 (8%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + + G A F Q + W AMIS Y NG+ A ++FD M
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR--SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS 114
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+A A++ + + KA ++F + + + + M+ R+GR DEA L
Sbjct: 115 YNAMITAMIK---NKCDLGKAYELFCDIPEKNAVS-----YATMITGFVRAGRFDEAEFL 166
Query: 310 IRELP 314
E P
Sbjct: 167 YAETP 171
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 204/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T + V++AC+ ++ G+QVH LK+ +S I TALVDMY K G A
Sbjct: 311 PSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKG 370
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L+ +PD W SMI+G+ Q G
Sbjct: 371 FNYLQ------------------------------------QPDLVLWTSMIAGYVQNGE 394
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A L+ +MQ G++P+ + SVL AC++L+A G++ H I+ L + ++ +A
Sbjct: 395 NEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSA 454
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L +MY KCG F + + D WNAMISG +NG + A+E+F+ M+Q+ K
Sbjct: 455 LSTMYAKCGNLEEGNIVFRR--MPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTK 512
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC H G VD F MM D+FGL PK EH+ CMVD+L R+G+L EA+E
Sbjct: 513 PDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKE 572
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I + + ++ LLGAC + N +LG KL E+ + + +V+LS IY LGR
Sbjct: 573 FIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGR 632
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
EDV R+R M+ R ++K PG S
Sbjct: 633 PEDVERVRSMMKVRGVSKEPGCS 655
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 155/318 (48%), Gaps = 39/318 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF + +A ++L + FG+Q H + +K+ D +G++L++MY K G L A V
Sbjct: 109 PNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREV 168
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN +TW TMI+G + + +A E+FE + E + D ++ F+
Sbjct: 169 FDRMP-ERNEVTWATMISGYAIQRLAGEAFEVFELMRRE--EED-------VNEFA---- 214
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
TSVLSA A + GK+ H ++ L S+ A
Sbjct: 215 ----------------------FTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNA 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KCG + + F+ K + W+AMI+GY ++G+ A+++F M +
Sbjct: 253 LVTMYAKCGSLDDSLQVFEMSNDK--NSITWSAMITGYAQSGDSHKALKLFSRMHFAGIN 310
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + V VL+AC A V++ Q+ + G + + +VD+ +SG ++AR+
Sbjct: 311 PSEFTLVGVLNACSDACAVEEGKQVHNYL-LKLGFESQLYIMTALVDMYAKSGVTEDARK 369
Query: 309 LIRELPEPTVSVYHSLLG 326
L +P + ++ S++
Sbjct: 370 GFNYLQQPDLVLWTSMIA 387
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 42/287 (14%)
Query: 27 LQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMI 85
LQ GR +H +K+ S + + +L++ Y KC LP A VF +
Sbjct: 23 LQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIH------------ 70
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF--KLFEKMQSTG 143
D +WN +I+G+SQ G +F +LF++M++
Sbjct: 71 ------------------------NKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADN 106
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
++P+ + + +A ++LS++ G++ H I+ D + ++L++MY K G AR
Sbjct: 107 ILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAR 166
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD+ + + W MISGY A E+F+LM++E+ N +F +VLSA
Sbjct: 167 EVFDR--MPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAV 224
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
VD QI + GL +V + + G LD++ ++
Sbjct: 225 PEFVDSGKQIHCLAVKT-GLLVFLSILNALVTMYAKCGSLDDSLQVF 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 163 ALKLGKETHGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+L+ G+ H +I+ A + +A +LI+ Y KC A+ FD+ I D WN
Sbjct: 22 SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDR--IHNKDVISWNC 79
Query: 222 MISGYGRNGEYESA--VEIFDLMQQEKVKPNSASFVAVLSAC--------GHAGHVDKAL 271
+I+GY + G S+ +E+F M+ + + PN+ +F + +A G H A+
Sbjct: 80 LINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHA-VAI 138
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
++ D G ++++ ++G L EARE+ +PE
Sbjct: 139 KMACFYDVFVG--------SSLLNMYCKAGLLFEAREVFDRMPE 174
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 216/385 (56%), Gaps = 10/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT I +S CA + L+ G+++H + + A++DMY+KCG L A +
Sbjct: 221 RPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKS 280
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + ++ +++W TMI G G E A LF+ + P WN++++G+ Q
Sbjct: 281 VFERID-NKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFP----WNALMAGYVQNK 335
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ + + P+ + ++LSAC+ L AL++G H ++ R L ++ T
Sbjct: 336 QGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGT 395
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L+ MY KCG A F + PD A W AMI G +G + A+E F M
Sbjct: 396 SLVDMYAKCGNIKKAICIFKEI---PDKNALTWTAMICGLANHGHADEAIEYFQRMIDLG 452
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ +F+ VLSAC HAG V + Q F++M + + L+ K +H+ CM+DLLGR+G LDEA
Sbjct: 453 LQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEA 512
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+L+ +P +P V+ +L AC H N LGE+ AMKL E++P + +V+L+N+YA
Sbjct: 513 EQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEA 572
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+ ++R M+ + K+PG S
Sbjct: 573 NMRKKADKVRVMMRHLGVEKVPGCS 597
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 180/366 (49%), Gaps = 15/366 (4%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +TF ++ ACA L Y +G V G K+ +D + A V + G + A
Sbjct: 116 SARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVSGSMVLA 175
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISGF 123
+F E +R++++WNT+I G + +G +A+ELF L +G +PD T +SG
Sbjct: 176 RRLFDE-SPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGC 234
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q+G +L E + S G+ +++ + +V+ +L+L K R D NK
Sbjct: 235 AQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFE---RID-NKTV 290
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLM 242
T +I + + G AR FD+ P+ F WNA+++GY +N + + A+ +F M
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEM---PERDVFPWNALMAGYVQNKQGKEAIALFHEM 347
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+ KV PN + V +LSAC G ++ + + +D L +VD+ + G
Sbjct: 348 QESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRH-QLYLSVALGTSLVDMYAKCGN 406
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSN 360
+ +A + +E+P+ + +++ H ++D E ++ + ++P+ T +LS
Sbjct: 407 IKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 361 -IYAGL 365
+AGL
Sbjct: 467 CCHAGL 472
>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 561
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 133/408 (32%), Positives = 214/408 (52%), Gaps = 39/408 (9%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P+S + S + A L + + G+++HG ++ D + T+LVDMY+K CL
Sbjct: 12 LGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEK 71
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A V K ++N+ WN++I+G G+ +A++L + EG PD TWN ++SG+S
Sbjct: 72 AQAVLHRAK-NKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYS 130
Query: 125 QLGM-----------------------------------RFEAFKLFEKMQSTGMVPSLK 149
G +A K+F +MQ+ + P+
Sbjct: 131 MQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNST 190
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
+ S+L ACA S LK G+E H ++ D +ATALI MY + G+ A F++
Sbjct: 191 TICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNK- 249
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
I+ WN M+ GY + E + ++D M++ ++P++ +F A+LSAC ++G VD+
Sbjct: 250 -IQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDE 308
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGAC 328
+ F M +D+ + P EH+ CMVDLLG+SG LDEA I +P +P S++ +LL +C
Sbjct: 309 GWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASC 368
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ 376
H N L E A KL +MEP N +V++ N+Y+ L RW V R++
Sbjct: 369 KIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKH 416
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 7/197 (3%)
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F + S G P VTS L A +L KLGKE HG+++R++LN D + T+L+ MY+K
Sbjct: 6 FRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVK 65
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
A+ + K + WN++ISGY G++ AV++ + M +E + P+ ++
Sbjct: 66 NDCLEKAQAVLHR--AKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWN 123
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
++S G +D+AL I + G+ P + ++ ++ + +A ++ ++
Sbjct: 124 GLVSGYSMQGRIDEALTIINRIKSS-GITPNVVSWTALISGCSQNEKYMDALKIFSQMQA 182
Query: 315 ---EPTVSVYHSLLGAC 328
+P + SLL AC
Sbjct: 183 ENVKPNSTTICSLLCAC 199
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 206/349 (59%), Gaps = 8/349 (2%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + +++ Y + G + A N+F+++ +N ++WNTMI+G G ++A E+FE
Sbjct: 356 KRDAICWNSMIAGYCQSGRMSEALNLFRQMP-VKNAVSWNTMISGYAQAGEMDRATEIFE 414
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + +WNS+I+GF Q G+ +A K M G P LS+CA+L+
Sbjct: 415 AMGVR----NVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLA 470
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
AL++GK+ H ++++ D ++ ALI+MY KCG A + F +I+ D WN++
Sbjct: 471 ALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFK--DIEGVDLISWNSL 528
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY NG A F+ M E P+ +F+ +LSAC HAG ++ + +F M + F
Sbjct: 529 ISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFA 588
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
++P EH+ C+VDLLGR GRL+EA ++R + + ++ SLL AC H N +LG+ A
Sbjct: 589 IEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAA 648
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L E+EP N + ++ LSN++A GRWEDV R+R ++ +R+ KLPG S
Sbjct: 649 LRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCS 697
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 80/132 (60%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF +S+CA+L LQ G+Q+H L LK +D + AL+ MY KCG + A
Sbjct: 453 KPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEK 512
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++G ++++WN++I+G LNG + +A FE ++ EG PD T+ M+S S G
Sbjct: 513 VFKDIEGV-DLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAG 571
Query: 128 MRFEAFKLFEKM 139
+ + LF+ M
Sbjct: 572 LTNQGVDLFKCM 583
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 39/344 (11%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L D+ + +S + A L+ + H L + + D ++ Y + G L
Sbjct: 70 LFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKL-FDLMAERDNFSWALMITCYTRKGMLEK 128
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F+ + + WN MIAG GR + A ++FE + + D ++NSM++G++
Sbjct: 129 ARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVK----DLVSYNSMLAGYT 184
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL-----------------G 167
Q G A K FE+M +V V ++ C SA +L G
Sbjct: 185 QNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCG 244
Query: 168 KETHGHVIRADL------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
HG ++ A K+ A+I+ Y++ Q A + F + K D W
Sbjct: 245 FARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK--DCVSWTT 302
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI+GY R G+ + A E+++ M + V A+ A++S G +D+A Q+F+ ++
Sbjct: 303 MINGYVRVGKLDEAREVYNQMPYKDV----AAKTALMSGLIQNGRIDEASQVFSQLN--- 355
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
K + M+ +SGR+ EA L R++P +++++
Sbjct: 356 --KRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTMI 397
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 152/351 (43%), Gaps = 52/351 (14%)
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L+ S+N+ N I + G+ ++A +F + H+ + AT+NSM++ F++ G +
Sbjct: 11 LEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHK----NHATYNSMVTVFAKNGRVSD 66
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF+KM +V + L + +E H + +D +I+
Sbjct: 67 ARQLFDKMSQRNLVSWNTMIAGYLHN-------NMVEEAH-KLFDLMAERDNFSWALMIT 118
Query: 192 MYMKCGQPSWARRFFDQFEIKPD--DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
Y + G AR F E+ PD D A WNAMI+GY + G ++ A ++F+ M + +
Sbjct: 119 CYTRKGMLEKARELF---ELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDL-- 173
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDD-----------------DFGL--------- 283
S+ ++L+ G + A++ F M + D G
Sbjct: 174 --VSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIP 231
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P + M+ R G++ EAR+L +P V +++++ A DL + A+K
Sbjct: 232 DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAA----YVQDLQIDEAVK 287
Query: 344 LQEMEP-ENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGI 393
L + P ++ + + N Y +G+ ++ + + + + + +G+
Sbjct: 288 LFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGL 338
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 210/387 (54%), Gaps = 41/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T ++V+SACA ++ GRQVH S+ I +L+D+Y KCG L
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGEL----- 317
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LFEGL ++ D +WN++I G++ +
Sbjct: 318 ---------------------------ETACGLFEGLLYK----DVISWNTLIGGYTHMN 346
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + S+L ACA L A+ +G+ H ++ + S+
Sbjct: 347 LYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSL 406
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A + F+ I + WNAMI G+ +G ++A +IF M++
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNS--ILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKI 464
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ +FV +LSAC +G +D IF M D+ + PK EH+GCM+DLLG SG E
Sbjct: 465 GIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKE 524
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I + EP ++ SLL AC N +LGE A L ++EPENP +V+LSNIYA
Sbjct: 525 AEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYAT 584
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRW +V +IR ++ND+ + K+PG S+
Sbjct: 585 AGRWNEVAKIRALLNDKGMKKVPGCSS 611
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 192/381 (50%), Gaps = 14/381 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF ++ +CA + G+Q+HG LK+ D + T+L+ +Y++ G L A V
Sbjct: 132 PNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKV 191
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+++++ +I G G E A +LF+ + + D +WN+MISG+++ G
Sbjct: 192 FDR-SPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVK----DVVSWNAMISGYAETGN 246
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF++M T + P + +V+SACA +++LG++ H + + + +
Sbjct: 247 YKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNS 306
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y KCG+ A F+ K D WN +I GY Y+ A+ +F M + +
Sbjct: 307 LMDLYSKCGELETACGLFEGLLYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGER 364
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-GCMVDLLGRSGRLDEAR 307
PN + +++L AC H G +D I +D ++D+ + G ++ A
Sbjct: 365 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAH 424
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNIYAGL 365
++ + ++S +++++ H +D ++ ++++ +EP++ T FV L + +
Sbjct: 425 QVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDIT-FVGLLSACSRS 483
Query: 366 GRWEDVGR--IRQMINDRQLT 384
G D+GR R M D ++T
Sbjct: 484 GML-DLGRHIFRTMTQDYKIT 503
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 161/355 (45%), Gaps = 74/355 (20%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
LP A +VF+ ++ N+L WNTM G L+ DP +
Sbjct: 84 LPYAISVFETIQ-EPNLLIWNTMFRGHALSS-------------------DPVS------ 117
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A KL+ M S G++P+ +L +CA A K G++ HGHV++ +
Sbjct: 118 ----------ALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDL 167
Query: 182 DESMATALISMYMKCGQPSWARRFFDQF-----------------------------EIK 212
D + T+LIS+Y++ G+ AR+ FD+ EI
Sbjct: 168 DLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIP 227
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WNAMISGY G Y+ A+E+F M + ++P+ ++ V V+SAC +G ++ Q
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
+ + +DD G + ++DL + G L+ A L L V +++L+G + H+
Sbjct: 288 VHSWIDDH-GFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGG-YTHM 345
Query: 333 NSDLGEEMAMKLQEM--EPENPTPFVILSNI--YAGLGRWEDVGRIRQMINDRQL 383
N L +E + QEM E P +LS + A LG D+GR + D++L
Sbjct: 346 N--LYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAI-DIGRWIHVYIDKRL 397
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 145/322 (45%), Gaps = 34/322 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD--TMIGTALVDMYLKCGCLPC 64
+ PN VT +S++ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 363 ERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEA 422
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ +WN MI G ++GR++ A ++F + G +PD T+ ++S S
Sbjct: 423 AHQVFNSIL-HKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACS 481
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ GM +F M Q + P L+ C+ +L L KE + ++
Sbjct: 482 RSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSG------LFKEAEEMINNMEME 535
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G F +I+P++P + + + Y G + +I
Sbjct: 536 PDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIR 595
Query: 240 DLMQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD-- 295
L+ + +K P +S +D + F + D P+ M++
Sbjct: 596 ALLNDKGMKKVPGCSSI-----------EIDSVVHEFIIGDK---FHPRNREIYGMLEEM 641
Query: 296 --LLGRSGRLDEARELIRELPE 315
LL ++G + + E+++E+ E
Sbjct: 642 EVLLEKAGFVPDTSEVLQEMEE 663
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 220/416 (52%), Gaps = 40/416 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC L +++ G VHG ++ +S+T + L+ + CG L A
Sbjct: 110 RPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARA 169
Query: 68 VFQ---------------------ELKGSR---------NILTWNTMIAGMMLNGRSEKA 97
+F EL +R ++++WN MI G G E A
Sbjct: 170 LFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESA 229
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+LF+ E K D TWN+MI+G+ G +A ++FE+M+S G +P + S+LSA
Sbjct: 230 RKLFD----EVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSA 285
Query: 158 CADLSALKLGKETHGHVIRADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDD 215
C DL L G+ H + +D S + ALI MY KCG A F ++ D
Sbjct: 286 CTDLGDLDAGQRIHCCISEMGF-RDLSVLLGNALIDMYAKCGSIVRALEVFQG--MREKD 342
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+ WN+++ G +G E ++ +F M++ K++P+ +FV VL AC HAG V++ Q F
Sbjct: 343 VSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFD 402
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
+M D++ ++P H+GCMVDLLGR+G L+EA + I + EP V+ +LLGAC H N
Sbjct: 403 LMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNV 462
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LG M+L +M + +V+LSNIYA G W+ V ++R++++D + K G S
Sbjct: 463 ELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCS 518
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 117/294 (39%), Gaps = 70/294 (23%)
Query: 105 AHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
AH+ F +PD WN+MI G +Q A L+ +M++ + P VL AC
Sbjct: 66 AHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTR 125
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ----------------PSW--- 201
L +K+G HG V R + + LI + CG +W
Sbjct: 126 LCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSAL 185
Query: 202 ------------ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK- 248
AR+ FD+ +K D WN MI+GY + GE ESA ++FD + + V
Sbjct: 186 TAGYARRGELGVARQLFDEMPVK--DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVT 243
Query: 249 ------------------------------PNSASFVAVLSACGHAGHVDKALQIFTMMD 278
P+ + +++LSAC G +D +I +
Sbjct: 244 WNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCI- 302
Query: 279 DDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ G + G ++D+ + G + A E+ + + E VS ++S+LG H
Sbjct: 303 SEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFH 356
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 203/383 (53%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF++++SA L++ ++VH + D +G ALV MY KCG A V
Sbjct: 434 PDATTFVNILSANVGEEALEWVKEVHSYAID-AGLVDLRVGNALVHMYAKCGNTMYAKQV 492
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ RN+ TW MISG +Q G
Sbjct: 493 FDDMV-ERNVTTWTV-----------------------------------MISGLAQHGC 516
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF LF +M G+VP S+LSACA AL+ KE H H + A L D + A
Sbjct: 517 GHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNA 576
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG ARR FD ++ D W MI G ++G A+++F M+ E K
Sbjct: 577 LVHMYAKCGSVDDARRVFD--DMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFK 634
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN SFVAVLSAC HAG VD+ + F + D+G++P EH+ CMVDLLGR+G+L+EA+
Sbjct: 635 PNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKH 694
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P EP + + +LLGAC + N ++ E A + +++P++ + +V+LSNIYA G
Sbjct: 695 FILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGN 754
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE +R M+ R + K PG S
Sbjct: 755 WEQKLLVRSMMQRRGIRKEPGRS 777
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 170/375 (45%), Gaps = 48/375 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +T++S++ AC S + L++G+++H ++ QSD + TALV+MY+KCG + A
Sbjct: 27 QPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQL 86
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ RN+++W MI GLAH G
Sbjct: 87 IFDKMV-ERNVISWTVMIG----------------GLAHYGRGQ---------------- 113
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF F +MQ G +P+ S+L+A A AL+ KE H H + A L D +
Sbjct: 114 ---EAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGN 170
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K G AR FD + D W MI G ++G + A +F M++
Sbjct: 171 ALVHMYAKSGSIDDARVVFDG--MVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC 228
Query: 248 KPNSASFVAVL--SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
PN +++++L SA G ++ ++ G ++ + + G +D+
Sbjct: 229 LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKA-GFISDLRVGNALIHMYAKCGSIDD 287
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE----NPTPFVILSNI 361
AR + + + V +++++G + G E +M+ E + T ++ L N
Sbjct: 288 ARLVFDGMCDRDVISWNAMIGGL---AQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNT 344
Query: 362 YAGLGRWEDVGRIRQ 376
+ G WE V + +
Sbjct: 345 HVSTGAWEWVKEVHK 359
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 50/384 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T++S+++ S ++ ++VH +++ SD +G+A V MY++CG + A +
Sbjct: 333 PDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLI 392
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +L RN+ TWN+MI G +Q
Sbjct: 393 FDKL-AVRNV-----------------------------------TTWNAMIGGVAQQKC 416
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +M+ G P ++LSA AL+ KE H + I A L D + A
Sbjct: 417 GREALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNA 475
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG +A++ FD ++ + W MISG ++G A +F M +E +
Sbjct: 476 LVHMYAKCGNTMYAKQVFD--DMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIV 533
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P++ ++V++LSAC G ++ ++ + + GL +V + + G +D+AR
Sbjct: 534 PDATTYVSILSACASTGALEWVKEVHSHAVNA-GLVSDLRVGNALVHMYAKCGSVDDARR 592
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNS--DLGEEMAMKLQEMEPENPTPFVILSNI-YAGL 365
+ ++ E V + ++G H L + MKL+ +P + +LS +AGL
Sbjct: 593 VFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGL 652
Query: 366 GRWEDVGRIRQMINDRQLTKLPGI 389
D GR RQ ++ LT+ GI
Sbjct: 653 ---VDEGR-RQFLS---LTQDYGI 669
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 41/321 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T++S+++A AS L++ ++VH + D +G ALV MY K G + A V
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+I +W MI G+ +GR ++A L
Sbjct: 189 FDGMV-ERDIFSWTVMIGGLAQHGRGQEAFSL---------------------------- 219
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS--ALKLGKETHGHVIRADLNKDESMA 186
F +M+ G +P+L S+L+A A S AL+ KE H H +A D +
Sbjct: 220 -------FLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVG 272
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG AR FD + D WNAMI G +NG A IF MQQE
Sbjct: 273 NALIHMYAKCGSIDDARLVFDG--MCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEG 330
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+S +++++L+ G + ++ + GL V + R G +D+A
Sbjct: 331 FVPDSTTYLSLLNTHVSTGAWEWVKEVHKHA-VEVGLVSDLRVGSAFVHMYIRCGSIDDA 389
Query: 307 RELIRELPEPTVSVYHSLLGA 327
+ + +L V+ +++++G
Sbjct: 390 QLIFDKLAVRNVTTWNAMIGG 410
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 40/254 (15%)
Query: 9 PNSVTFISVISACA--SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
PN T++S+++A A S L++ ++VH K SD +G AL+ MY KCG +
Sbjct: 230 PNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSI---- 285
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+ A +F+G+ D +WN+MI G +Q
Sbjct: 286 ----------------------------DDARLVFDGMCDR----DVISWNAMIGGLAQN 313
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EAF +F KMQ G VP S+L+ A + KE H H + L D +
Sbjct: 314 GCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVG 373
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+A + MY++CG A+ FD+ ++ + WNAMI G + A+ +F M++E
Sbjct: 374 SAFVHMYIRCGSIDDAQLIFDKLAVR--NVTTWNAMIGGVAQQKCGREALSLFLQMRREG 431
Query: 247 VKPNSASFVAVLSA 260
P++ +FV +LSA
Sbjct: 432 FFPDATTFVNILSA 445
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI G+++ G +A K++ +M+ G P+ S+L AC +LK GK+ H H+I++
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D + TAL++MY+KCG A+ FD+ + + W MI G G + A
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDK--MVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F MQ+E PNS ++V++L+A AG ++ ++ + + GL +V +
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNA-GLALDLRVGNALVHMYA 177
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+SG +D+AR + + E + + ++G H
Sbjct: 178 KSGSIDDARVVFDGMVERDIFSWTVMIGGLAQH 210
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 224/449 (49%), Gaps = 69/449 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V+ IS+I A L YL G+++H +K S+ ++G L+DMY KC C+
Sbjct: 258 KPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGR 317
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK----------------- 110
F +L +++++W T AG N +A+EL L EG
Sbjct: 318 AF-DLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLN 376
Query: 111 -----------------PDPATWNSMISGFSQLGMRFEAFKLFE---------------- 137
DP N++I + + G+ A ++FE
Sbjct: 377 CLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISC 436
Query: 138 ---------------KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
M+ TG+ P + S+LSA LS LK GKE HG +IR +
Sbjct: 437 YVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILE 496
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S++ L+ MY +CG A + F K + W AMIS YG +G E+AVE+F M
Sbjct: 497 GSISNTLVDMYARCGSVEDAYKIFTC--TKNRNLILWTAMISAYGMHGYGEAAVELFMRM 554
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ EK+ P+ +F+A+L AC H+G V++ +M ++ L+P EH+ C+VDLLGR
Sbjct: 555 KDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNC 614
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L+EA ++++ + EPT V+ +LLGAC H N ++GE A KL E++ +NP +V++SN+
Sbjct: 615 LEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNV 674
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+A GRW+DV +R + LTK PG S
Sbjct: 675 FAANGRWKDVEEVRMRMKGSGLTKNPGCS 703
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 151/356 (42%), Gaps = 44/356 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
N+ TF + + AC +++ G Q+H LK + D + ALV MY++ G +P A +
Sbjct: 158 TNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVI 217
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L+G D TWNSM++GF Q G+
Sbjct: 218 FGNLEG------------------------------------KDIVTWNSMLTGFIQNGL 241
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + F +Q+ + P + S++ A L L GKE H + I+ + + +
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNT 301
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KC S+ R FD K D W +GY +N Y A+E+ +Q E +
Sbjct: 302 LIDMYAKCCCMSYGGRAFDLMAHK--DLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
++ ++L AC + K +I P ++ ++D+ G G +D A
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAVR 417
Query: 309 LIRELPEPTVSVYHSLLGACWCH---LNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
+ + V + S++ +C+ H N L +MK +EP+ T ILS +
Sbjct: 418 IFESIECKDVVSWTSMI-SCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 37/264 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF ++ AC + L G ++HGL +K S + +LV +Y KC
Sbjct: 57 DSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKC---------- 106
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ G+R +LF+ + + D +WNS+IS +S GM
Sbjct: 107 NDINGAR----------------------KLFDRMY---VRNDVVSWNSIISAYSGNGMC 141
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +M G+V + + L AC D S +KLG + H ++++ D +A AL
Sbjct: 142 TEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANAL 201
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY++ G+ A F E K D WN+M++G+ +NG Y A+E F +Q +KP
Sbjct: 202 VAMYVRFGKMPEAAVIFGNLEGK--DIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKP 259
Query: 250 NSASFVAVLSACGHAGHVDKALQI 273
+ S ++++ A G G++ +I
Sbjct: 260 DQVSIISIIVASGRLGYLLNGKEI 283
>gi|218192520|gb|EEC74947.1| hypothetical protein OsI_10926 [Oryza sativa Indica Group]
Length = 469
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 226/416 (54%), Gaps = 45/416 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+ + ACA L + GR +H L L + SD + TAL+DMY KCG + A VF E+
Sbjct: 52 TALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEM-A 110
Query: 75 SR------------------------------------NILTWNTMIAGMMLNGRSEKAM 98
SR +++TWN +++G L G A
Sbjct: 111 SRGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAG 170
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRF-EAFKLFEKMQSTG--MVPSLKCVTSVL 155
+L + +GF+PD TW S +SG S L ++ A LF M G ++PS ++++L
Sbjct: 171 DLVGAMKDDGFQPDVVTWTSRVSG-SVLNFQYGRARALFRAMMVAGGRVLPSSATISTIL 229
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A A+++ +K GKE HG+ + A + ++ ++++AL+ MY KCG ARR FD+ +
Sbjct: 230 PAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRLFDKMPQR--S 287
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+MI G +G + AV +FD M ++ KP+ +F AVL+AC + G V+ ++
Sbjct: 288 TVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGMVEVGKILYR 347
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M ++ ++P+ EH+ CMV LLGR+GRLDEA IR +P EP V+ +LLGAC H N
Sbjct: 348 AMQVEYSVEPRLEHYACMVHLLGRAGRLDEAYGFIRAMPLEPDRFVWGALLGACRSHGNI 407
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E A +L +EP+N ++LS+ A G+ +DV +I++++ R+L KL S
Sbjct: 408 ELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVKRRRLKKLDSYS 463
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 126/253 (49%), Gaps = 13/253 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T +++ A A++ ++ G++VHG ++ + + + +ALVDMY KCG + A +
Sbjct: 220 PSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRL 279
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+ +TWN+MI G+ +G ++A+ LF+ + +G KPD T+ ++++ S GM
Sbjct: 280 FDKMP-QRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGM 338
Query: 129 RFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L+ MQ V P L+ C+ +L L E +G + L D
Sbjct: 339 VEVGKILYRAMQVEYSVEPRLEHYACMVHLLGRAGRLD------EAYGFIRAMPLEPDRF 392
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + ++PD+ A + S G+ + +I L++
Sbjct: 393 VWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVK 452
Query: 244 QEKVKP-NSASFV 255
+ ++K +S S+V
Sbjct: 453 RRRLKKLDSYSWV 465
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 90/179 (50%), Gaps = 9/179 (5%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLF---EKMQ--STGMV-PSLKCVTSVLSACADLSALKLG 167
++W ++ S+ G + +LF ++Q S G V P V + L ACA L+ + G
Sbjct: 7 SSWMRQLTSSSRQGHHGDVLRLFFTGVRLQAGSRGTVDPWPGAVPTALRACAHLADVASG 66
Query: 168 KETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
+ H V+ R L D ATAL+ MY KCG + AR+ FD+ + DP WNA+++ Y
Sbjct: 67 RLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMASR-GDPVVWNALLACY 125
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+G E A+ + M+ + P+ ++ V+S AG A + M DD G +P
Sbjct: 126 ARHGLPEHALALAVKMRGIGLCPDLVTWNIVVSGFALAGDDLMAGDLVGAMKDD-GFQP 183
>gi|147777522|emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
Length = 513
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 215/383 (56%), Gaps = 6/383 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ F + +CA+ G +H K S+ + ALVDMY KC + A ++F
Sbjct: 46 DAFVFPLALKSCAAAHRPNLGAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLF 105
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GM 128
E+ RNI+ WN MI+ +GR A+ LFE + E P+ +T+N++ISG S L
Sbjct: 106 DEIP-HRNIVVWNAMISIYTHSGRVADALGLFEVMDVE---PNASTFNAIISGLSGLEDG 161
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
F+A + +M G+ +L + ++L AC DL+AL L KE HG+ IR ++ + +
Sbjct: 162 SFKALSFYRRMGEVGLKQNLITLLALLPACVDLAALTLIKEIHGYAIRNGIDPHPHLRSC 221
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y +CG ++ F + D W+++IS Y +G+ +A+E F+ M+ KV+
Sbjct: 222 LVEAYGRCGCIVNSQCVFQSISMSERDVVAWSSLISAYALHGDARTALETFEQMEMAKVQ 281
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL AC HAG D+AL F M D+G++ +H+ C+VD L R+GRL EA E
Sbjct: 282 PDGITFLGVLKACSHAGLADEALGYFGRMCKDYGVEASSDHYSCVVDALSRAGRLYEAYE 341
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P + T + +LLGAC + +L E L E+EP+N +V+L+ IYA +GR
Sbjct: 342 IIQGMPVKATAKTWGALLGACRTYGEVELAEIAGRALFELEPDNAANYVLLARIYASVGR 401
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
E+ R+R+ +N+ + PG S
Sbjct: 402 HEEAQRMRREMNEMGVKAAPGSS 424
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 207/383 (54%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ S+++ACA L+ G+ VH + ++++ + AL DMY KCG + AH+V
Sbjct: 452 PDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDV 511
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K K D +WN+MI G+++ +
Sbjct: 512 FSHMK------------------------------------KKDVISWNTMIGGYTKNSL 535
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ P V +L ACA L+AL G+E HG+ +R ++D+ + A
Sbjct: 536 PNEALTLFAEMQRESK-PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNA 594
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY+KCG AR FD I D W MI+GYG +G A+ F+ M+ ++
Sbjct: 595 VVDMYVKCGLLVLARSLFDM--IPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF+++L AC H+G +D+ +IF +M + ++P EH+ CMVDLL R+G L +A +
Sbjct: 653 PDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHK 712
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P +P +++ +LL C H + L E++A ++ E+EPEN +V+L+NIYA +
Sbjct: 713 FIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEK 772
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE+V ++R+ I R L K PG S
Sbjct: 773 WEEVQKLRKKIGQRGLKKNPGCS 795
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 179/426 (42%), Gaps = 80/426 (18%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +PNS TF S++ A++ ++ GRQVHGL K+ S + +L+ Y + C
Sbjct: 245 LGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRC 304
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW-------- 116
A +F EL R++++WN+MI+G + NG ++ +E+F + G D AT
Sbjct: 305 AQKLFDELT-DRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACA 363
Query: 117 ----------------------------NSMISGFSQLGMRFEAFKLFEK---------- 138
N+++ +S+ G A ++FE+
Sbjct: 364 NIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWT 423
Query: 139 ---------------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
M+S G+VP + VTS+L+ACA LK GK H ++
Sbjct: 424 SMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIREN 483
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+L + ++ AL MY KCG A F +K D WN MI GY +N A+
Sbjct: 484 NLETNSFVSNALTDMYAKCGSMKDAHDVFSH--MKKKDVISWNTMIGGYTKNSLPNEALT 541
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F MQ+E KP+ + +L AC +DK +I + G + +VD+
Sbjct: 542 LFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYALRN-GYSEDKYVTNAVVDMY 599
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-----AMKLQEMEPENP 352
+ G L AR L +P + + ++ H G E M++ +EP+
Sbjct: 600 VKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMH---GYGSEAINTFNQMRMTGIEPDEV 656
Query: 353 TPFVIL 358
+ IL
Sbjct: 657 SFISIL 662
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 150/346 (43%), Gaps = 45/346 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ S++ CA ++ GR+V + D ++G LV MY+KCG L VF +L
Sbjct: 152 AYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKL 211
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
S+ I WN MI+ +G +++ LF+ + G KP+ T++S+
Sbjct: 212 SESK-IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSI------------- 257
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LKC +V + ++ G++ HG + + N ++ +LIS
Sbjct: 258 ---------------LKCFAAV-------ARVEEGRQVHGLICKLGFNSYNTVVNSLISF 295
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y + A++ FD E+ D WN+MISGY +NG + +EIF M V + A
Sbjct: 296 YFVGRKVRCAQKLFD--ELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLA 353
Query: 253 SFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ V V AC + G + K L +++ L + ++D+ + G L+ A +
Sbjct: 354 TMVNVFVACANIGTLLLGKVLHSYSIKAAT--LDREVRFNNTLLDMYSKCGDLNSAIRVF 411
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
+ E TV + S++ ++ L + EM+ P V
Sbjct: 412 ERMDEKTVVSWTSMITG---YVREGLSDGAIKLFDEMKSRGVVPDV 454
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 125/248 (50%), Gaps = 12/248 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++ ACASL L GR++HG L+ D + A+VDMY+KCG L A +
Sbjct: 551 KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARS 610
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++++++W MIAG ++G +A+ F + G +PD ++ S++ S G
Sbjct: 611 LF-DMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSG 669
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K+F M+ + P+L+ C+ +L+ +L + H + + D
Sbjct: 670 LLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLV------KAHKFIKAMPIKPDA 723
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ AL+ A + ++ FE++P++ ++ + + Y ++E ++ +
Sbjct: 724 TIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKI 783
Query: 243 QQEKVKPN 250
Q +K N
Sbjct: 784 GQRGLKKN 791
>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g53600, mitochondrial; Flags: Precursor
gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 717
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 221/409 (54%), Gaps = 31/409 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T + AC + + G Q+HGL ++ + D +G +L+ MY K G + A VF
Sbjct: 274 NSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVF 333
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE----------GF---------- 109
+K +++ ++WN++I G++ + +A ELFE + + GF
Sbjct: 334 GVMK-NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 110 -------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ D TW +MIS F G EA F KM + P+ +SVLSA A L+
Sbjct: 393 ELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L G + HG V++ ++ D S+ +L+SMY KCG + A + F I + +N M
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSC--ISEPNIVSYNTM 510
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
ISGY NG + A+++F +++ +PN +F+A+LSAC H G+VD + F M +
Sbjct: 511 ISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYN 570
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
++P +H+ CMVDLLGRSG LD+A LI +P +P V+ SLL A HL DL E A
Sbjct: 571 IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAA 630
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
KL E+EP++ TP+V+LS +Y+ +G+ D RI + +++ K PG S
Sbjct: 631 KKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSS 679
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF SV+SA ASL L G Q+HG +K+ +D + +LV MY KCG A+ +
Sbjct: 436 PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + NI+++NTMI+G NG +KA++LF L G +P+ T+ +++S +G
Sbjct: 496 FSCI-SEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGY 554
Query: 129 RFEAFKLFEKMQST 142
+K F+ M+S+
Sbjct: 555 VDLGWKYFKSMKSS 568
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 152/334 (45%), Gaps = 33/334 (9%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE---KQSDTMIGTALVDMYLKCG 60
C E N+V++ ++I+ +++ GR L E K D++ L+ YL+ G
Sbjct: 137 CDIPEKNAVSYATMITG-----FVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A VFQ + + +++ ++M+ G GR A LF+ + + TW +MI
Sbjct: 192 KWNEAVRVFQGM-AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER----NVITWTAMI 246
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL-SACADLSALKLGKETHGHVIRADL 179
G+ + G + F LF +M+ G V +V+ AC D + G + HG V R L
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+SMY K G A+ F +K D WN++I+G + + A E+F
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGV--MKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH--FGCMVDLL 297
+ M + + S+ ++ G + K +++F MM P++++ + M+
Sbjct: 365 EKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMM-------PEKDNITWTAMISAF 413
Query: 298 GRSGRLDEA----RELIRELPEPTVSVYHSLLGA 327
+G +EA +++++ P + S+L A
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 40/239 (16%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------- 102
+ + + G L A +F+++ +R+I++W MI+ NG+ KA ++F+
Sbjct: 57 ISKHARNGNLQEAEAIFRQM-SNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSY 115
Query: 103 --------------GLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
G A+E F + + ++ +MI+GF + G EA L+ +
Sbjct: 116 NAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------ 169
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPSWAR 203
+K SV S L+ GK V + K+ ++++ Y K G+ AR
Sbjct: 170 -TPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSAC 261
FD+ + + W AMI GY + G +E +F M+QE VK NS + + AC
Sbjct: 229 SLFDR--MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + + G A F Q + W AMIS Y NG+ A ++FD M
Sbjct: 57 ISKHARNGNLQEAEAIFRQMSNR--SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTS 114
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+A A++ G KA ++F + + + + M+ R+GR DEA L
Sbjct: 115 YNAMITAMIKNKCDLG---KAYELFCDIPEKNAVS-----YATMITGFVRAGRFDEAEFL 166
Query: 310 IRELP 314
E P
Sbjct: 167 YAETP 171
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 218/385 (56%), Gaps = 12/385 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF V+ AC G H +K+ +S + L+ +Y + A +
Sbjct: 108 PNNYTFSFVLRACTD--NSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKL 165
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+++TW +I G + +G E A ELF+ + + +W++MI+G+ +GM
Sbjct: 166 F-DVSTCRDVITWTALINGYVKSGHVEFARELFDQMPER----NEVSWSAMITGYVHMGM 220
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF +Q TG+ P+ + L+AC+ L +L G+ H +V R D + TA
Sbjct: 221 FREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTA 280
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG A F++ PD AF + ++ISG +G+ A+++F MQ EKV
Sbjct: 281 LVDMYAKCGCIEIACSVFEKM---PDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKV 337
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +F+ VLSAC G VD+ L+IF M +G++P +H+GCMVDLLGR+G L+EA+
Sbjct: 338 IPNEVTFICVLSACSRMGLVDEGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAK 397
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+RE+P EP V +LL +C H + +LG+E L E ++ V+LSN+YA
Sbjct: 398 RLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSN 457
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W+ V ++R+ + +++ K+PG S+
Sbjct: 458 QWDWVVKVRKEMGAKKVKKVPGCSS 482
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 38/300 (12%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
N A +LF L H WN++I F + A L++ M TG +P+
Sbjct: 57 NADISHAYKLFLSLPHR----TTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYT 112
Query: 151 VTSVLSACADLS---------ALKLGKETHGHVIRADLN--------------------K 181
+ VL AC D S +KLG E++ V+ ++ +
Sbjct: 113 FSFVLRACTDNSPVGLASHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCR 172
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D TALI+ Y+K G +AR FDQ + + W+AMI+GY G + A+E+F+
Sbjct: 173 DVITWTALINGYVKSGHVEFARELFDQ--MPERNEVSWSAMITGYVHMGMFREALELFND 230
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
+Q ++PN A V L+AC + G +D I +D + G + + +VD+ + G
Sbjct: 231 LQLTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRN-GTELDRVLGTALVDMYAKCG 289
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--EMEPENPTPFVILS 359
++ A + ++P+ + SL+ H S ++ ++Q ++ P T +LS
Sbjct: 290 CIEIACSVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLS 349
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 214/385 (55%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T ++ AC L + G QVHG+T++ +D + T L+ +Y + GCL H
Sbjct: 105 KPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 164
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + + M+ G A +LFEG+ DP WN+MISG++Q+G
Sbjct: 165 VFNSIPCP-DFVCRTAMVTACARCGDVVFARKLFEGMPER----DPIAWNAMISGYAQVG 219
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F MQ G+ + + SVLSAC L AL G+ H ++ R + +AT
Sbjct: 220 ESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLAT 279
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ +Y KCG A F E K + W++ ++G NG E +E+F LM+Q+ V
Sbjct: 280 TLVDLYAKCGDMEKAMEVFWGMEEK--NVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +FV+VL C G VD+ + F M ++FG++P+ EH+GC+VDL R+GRL++A
Sbjct: 338 TPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAV 397
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I+++P +P +V+ SLL A + N +LG + K+ E+E N +V+LSNIYA
Sbjct: 398 SIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSN 457
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W++V +RQ + + + K PG S
Sbjct: 458 DWDNVSHVRQSMKSKGVRKQPGCSV 482
>gi|296083841|emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 216/435 (49%), Gaps = 90/435 (20%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+SVT +VIS+CA LL L+ G+++H ++ D + +ALVDMY KCGCL A
Sbjct: 108 KPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKE 167
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ + + +WNSMI+G+S G
Sbjct: 168 VFEQIQ------------------------------------RKNVVSWNSMIAGYSLKG 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+LF +M G+ P+L ++S+L AC+ L+LGK HG++IR + D + +
Sbjct: 192 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 251
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY--------------- 232
+LI +Y KCG A F + + WN MISGY + G Y
Sbjct: 252 SLIDLYFKCGNIGSAENVFQN--MPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGV 309
Query: 233 -------------------------------ESAVEI----FDLMQQEKVKPNSASFVAV 257
ES +EI F+ MQQ KP+ +F+A+
Sbjct: 310 KPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVLFEKMQQSDAKPDKVTFLAI 369
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-- 315
LSAC HAG VD+ F M ++G KP EH+ C++DLLGR GRL EA E+++ P+
Sbjct: 370 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIR 429
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
V + +L AC H DLGE++ L E +P++P+ ++ILSN+YA + +W++V ++R
Sbjct: 430 EDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVR 489
Query: 376 QMINDRQLTKLPGIS 390
I + L K PG S
Sbjct: 490 LKIKELGLKKNPGCS 504
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 152/323 (47%), Gaps = 42/323 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ +S++ C YL+ G+ +H + + Q++ + +L+++Y C A VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q ++ +I WN ++A N + EG +P+
Sbjct: 62 QTIENPLDITLWNGLMAACTKNF-----------IFIEGLEPE----------------- 93
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +LFE+M+ +G P +T+V+S+CA L L+ GKE H ++R+ D +++AL
Sbjct: 94 -KALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 152
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A+ F+Q I+ + WN+MI+GY G+ +S +E+F M +E ++P
Sbjct: 153 VDMYGKCGCLEMAKEVFEQ--IQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 210
Query: 250 NSASFVAVLSACGHA-----GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ ++L AC + G I ++ D + ++DL + G +
Sbjct: 211 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSS------LIDLYFKCGNIG 264
Query: 305 EARELIRELPEPTVSVYHSLLGA 327
A + + +P+ V ++ ++
Sbjct: 265 SAENVFQNMPKTNVVSWNVMISG 287
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 203/347 (58%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT+ ++ Y++CG L A +FQ + ++++++WNTMIAG +G+ KA+ +F +
Sbjct: 358 DTVCWNTMISGYVQCGILEEAMLLFQRMP-NKDMVSWNTMIAGYAQDGQMHKAIGIFRRM 416
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ + +WNS+ISGF Q +A F M+ S L ACA+L+ L
Sbjct: 417 N----RRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVL 472
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+G++ H ++R+ D ALIS Y KCG+ A++ FD+ K D WNA+I
Sbjct: 473 HVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYK--DIVSWNALID 530
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY NG+ A+ +F M+ V+P+ +FV +LSAC HAG +D+ L F M ++ LK
Sbjct: 531 GYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLK 590
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+ CMVDLLGR+G+L+EA EL++ + +P V+ +LLGAC H N +L + A +
Sbjct: 591 PVAEHYACMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAER 650
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E+EP + +V+LSNI A G+W++ + R I ++ + K PG++
Sbjct: 651 LSELEPRKASNYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLA 697
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ S + ACA+L L GRQ+H L ++ +D+ G AL+ Y KCG + A +F E+
Sbjct: 458 TYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEM 517
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++I++WN +I G NG+ +A+ +F + G +PD T+ ++S S G+ E
Sbjct: 518 V-YKDIVSWNALIDGYASNGQGTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEG 576
Query: 133 FKLFEKM 139
F M
Sbjct: 577 LFFFYSM 583
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 84/337 (24%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G L A +F + RN +T+N M++ + +GR ++A LF+G+ + +WN
Sbjct: 30 RSGQLAAARRLFDAMP-LRNTVTYNAMLSALARHGRIDEARALFDGMPGR----NTVSWN 84
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI+ S G +A LF++M
Sbjct: 85 AMIAALSDHGRVADARSLFDRMPV------------------------------------ 108
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP--AFWNAMISGYGRNGEYESA 235
+DE T ++S Y + G AR D+ P D A +NAMISGY +NG ++ A
Sbjct: 109 ---RDEFSWTVMVSCYARGGDLELARDVLDRM---PGDKCTACYNAMISGYAKNGRFDDA 162
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD--------------- 280
+++ +E P+ S+ + L+ +G + +A+Q F M D
Sbjct: 163 MKLL----REMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTG 218
Query: 281 -------FGLKPKQEHFGCMVDLLG---RSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
F K + + V LL R+GR+ +AR+L +PE V ++ +L +
Sbjct: 219 DLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDG-YV 277
Query: 331 HLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
HL+ EE EM +N + + I +GL R
Sbjct: 278 HLSPI--EEACKLFDEMPIKNSISW---TTIISGLAR 309
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 19/233 (8%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D T +V Y + G L A +V + G + +N MI+G NGR + AM+L
Sbjct: 110 DEFSWTVMVSCYARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLR-- 167
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
E PD +WNS ++G +Q G A + F++M +L V + + ++
Sbjct: 168 --EMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASS 225
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
K +VI S T L++ Y + G+ + AR FD+ + + WN M+
Sbjct: 226 FFAKIESPNVI--------SWVT-LLNGYCRAGRIADARDLFDRMPER--NVVAWNVMLD 274
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
GY E A ++FD M + NS S+ ++S AG + +A + M
Sbjct: 275 GYVHLSPIEEACKLFDEMPIK----NSISWTTIISGLARAGKLQEAKDLLDKM 323
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 157/355 (44%), Gaps = 37/355 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCA 65
+ PN ++++++++ Y + GR L + + + ++D Y+ + A
Sbjct: 231 ESPNVISWVTLLNG-----YCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEA 285
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F E+ +N ++W T+I+G+ G+ ++A +L + ++ A ++ G+ Q
Sbjct: 286 CKLFDEMP-IKNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTA----LMHGYLQ 340
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
M +A ++F+ M+ V C +++S L E + + NKD
Sbjct: 341 RNMADDARRIFDGME----VHDTVCWNTMISGYVQCGIL----EEAMLLFQRMPNKDMVS 392
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+I+ Y + GQ A F + + + WN++ISG+ +N + A+ F LM++
Sbjct: 393 WNTMIAGYAQDGQMHKAIGIFRRMNRR--NTVSWNSVISGFVQNDRFVDALHHFMLMRRG 450
Query: 246 KVKPNSASFVAVLSACGHAG--HVDKALQIFTM----MDDDFGLKPKQEHFGCMVDLLGR 299
+ + +++ + L AC + HV + L + ++D F ++ +
Sbjct: 451 TNRADWSTYASCLRACANLAVLHVGRQLHNLLVRSGHINDSFA-------GNALISTYAK 503
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
GR+ EA+++ E+ + +++L+ + ++ G E +EME P
Sbjct: 504 CGRILEAKQIFDEMVYKDIVSWNALIDG---YASNGQGTEAIAVFREMEANGVRP 555
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 208/386 (53%), Gaps = 42/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T S+I C+ L G+ VHG T++ Q D + ++L+D+Y KCG + A
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEK 364
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + S+ + +WN MISG+ G
Sbjct: 365 IFKLIPKSKVV------------------------------------SWNVMISGYVAEG 388
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
FEA LF +M+ + + TSVL+AC+ L+AL+ GKE H +I L+ +E +
Sbjct: 389 KLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMG 448
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KCG A F F+ P D W +MI+ YG +G A+E+F M Q
Sbjct: 449 ALLDMYAKCGAVDEA---FSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSN 505
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP+ +F+A+LSACGHAG VD+ F M + +G+ P+ EH+ C++DLLGR+GRL EA
Sbjct: 506 VKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEA 565
Query: 307 RELIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
E++++ PE V + +L AC H N DLG E+A L + +P++ + +++LSN+YA
Sbjct: 566 YEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYAS 625
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
+W++V +R + + L K PG S
Sbjct: 626 AHKWDEVRVVRSKMKELGLKKNPGCS 651
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 179/375 (47%), Gaps = 43/375 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSVT + IS+CA LL L G ++H + D+ I +ALVDMY KCG L
Sbjct: 204 EPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHL----- 258
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A+E+FE + K WNSMISG+ G
Sbjct: 259 ---------------------------EMAIEIFEQMP----KKTVVAWNSMISGYGLKG 287
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+LF++M + G+ P+L ++S++ C+ + L GK HG+ IR + D + +
Sbjct: 288 DIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNS 347
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ +Y KCG+ A + F I WN MISGY G+ A+ +F M++ V
Sbjct: 348 SLMDLYFKCGKVELAEKIFKL--IPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYV 405
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ ++ +F +VL+AC ++K +I ++ + L + G ++D+ + G +DEA
Sbjct: 406 ESDAITFTSVLTACSQLAALEKGKEIHNLIIEK-KLDNNEVVMGALLDMYAKCGAVDEAF 464
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAG 364
+ + LP+ + + S++ A H ++ E+ M ++P+ ILS +AG
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAG 524
Query: 365 LGRWEDVGRIRQMIN 379
L E QMIN
Sbjct: 525 LVD-EGCYYFNQMIN 538
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 43/320 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T+ SV AC L G+ +H +K D ++G++LV MY KC N
Sbjct: 103 KPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKC-------N 155
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F EKA+ LF +E + D A WN++IS + Q G
Sbjct: 156 AF-------------------------EKAIWLF----NEMPEKDVACWNTVISCYYQSG 186
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + F M+ G P+ +T+ +S+CA L L G E H +I + D +++
Sbjct: 187 NFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A F+Q K WN+MISGYG G+ S +++F M E V
Sbjct: 247 ALVDMYGKCGHLEMAIEIFEQMPKKT--VVAWNSMISGYGLKGDIISCIQLFKRMYNEGV 304
Query: 248 KPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP + +++ C + + K + +T+ + ++P ++DL + G+++
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNR---IQPDVFVNSSLMDLYFKCGKVEL 361
Query: 306 ARELIRELPEPTVSVYHSLL 325
A ++ + +P+ V ++ ++
Sbjct: 362 AEKIFKLIPKSKVVSWNVMI 381
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 41/314 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ ++ AC + L+ G+ +H + + Q+D + L++ YL C A VF ++
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLGMRFEA 132
I WN ++AG N +A+ELFE L H + KPD T+
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTY---------------- 109
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
SV AC L LGK H +I+ L D + ++L+ M
Sbjct: 110 -------------------PSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGM 150
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F+ E+ D A WN +IS Y ++G ++ A+E F LM++ +PNS
Sbjct: 151 YGKCNAFEKAIWLFN--EMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSV 208
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ +S+C +++ ++I +++ F L +VD+ G+ G L+ A E+
Sbjct: 209 TITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS--SALVDMYGKCGHLEMAIEIFE 266
Query: 312 ELPEPTVSVYHSLL 325
++P+ TV ++S++
Sbjct: 267 QMPKKTVVAWNSMI 280
>gi|147800371|emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
Length = 773
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 202/388 (52%), Gaps = 39/388 (10%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C + + F + AC+ L L+ GR VH LK + D ++ AL+ +Y + GC
Sbjct: 170 CQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCF- 228
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
E+A+ +F+G+ H +WNS+I+G
Sbjct: 229 -------------------------------EEALRMFDGMPHRNL----VSWNSLIAGL 253
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ FEA + F MQ GM S +T++L CA ++AL GKE H ++++ D
Sbjct: 254 VKKEGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTAKPDA 313
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +L+ MY KCG + RR F+ + K D WN +I+GY NG A+E F M
Sbjct: 314 PVLNSLVDMYAKCGAMDYCRRVFNGMQGK--DLTSWNTLITGYAINGRMTEAMESFQEMI 371
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
P+ +F+A+LS C HAG D ++F MM D G+ P EH+ C+VD+LGR+GR+
Sbjct: 372 CSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDHGISPTVEHYACLVDVLGRAGRI 431
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E+++ +P +PT S++ SLL +C H N L E +A +L E+EP N +V+LSNIY
Sbjct: 432 KEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEPNNAGNYVMLSNIY 491
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A G WE V +R+ + R +TK G S
Sbjct: 492 ANAGMWESVKVVREFMEKRGMTKEAGCS 519
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 25/323 (7%)
Query: 64 CAHNVFQE--LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
C HN+ LKG +I + GR ++A +FE + P+ + W +M
Sbjct: 100 CNHNLLNNPTLKGK--------LITLFSVCGRVDEARRVFEDGGEDVDLPE-SVWVAMGI 150
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+S+ G EA L+ +M + L AC+DL L+ G+ H V++A +
Sbjct: 151 GYSRNGYPKEALLLYYEMVCQFGQLGNFAFSMALKACSDLGDLRTGRAVHAQVLKATEDP 210
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D+ + AL+ +Y + G A R FD + + WN++I+G + A+E F +
Sbjct: 211 DQVVNNALLRLYSEDGCFEEALRMFDGMPHR--NLVSWNSLIAGLVKKEGVFEAIEAFRI 268
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ + + + + +L C + +I ++ KP +VD+ + G
Sbjct: 269 MQGKGMGFSWVTLTTILPVCARVTALGSGKEIHAVIVKSTA-KPDAPVLNSLVDMYAKCG 327
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTPFV 356
+D R + + ++ +++L+ +N + E M QEM P+ T
Sbjct: 328 AMDYCRRVFNGMQGKDLTSWNTLITG--YAINGRMTEAME-SFQEMICSGFSPDGITFIA 384
Query: 357 ILSNI-YAGLGRWEDVGRIRQMI 378
+LS +AGL +D R+ +M+
Sbjct: 385 LLSGCSHAGLA--DDGCRLFEMM 405
>gi|302768267|ref|XP_002967553.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
gi|300164291|gb|EFJ30900.1| hypothetical protein SELMODRAFT_88824 [Selaginella moellendorffii]
Length = 670
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 212/388 (54%), Gaps = 11/388 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQF--GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
+ P+ VTF +++A A + GR++H + ++GTA++ MY KCG L
Sbjct: 159 ERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDD 218
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F+EL+ +N +TWN M+ L+GR +A+ELF E D WN+MI+ ++
Sbjct: 219 ARAAFEELQW-KNSVTWNAMMTNYKLDGRDREALELFR----EMHDADSVCWNAMIAAYA 273
Query: 125 QLGMRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q G +A L+ M +T + P +V+ CA+LSALK G+ H V + + +
Sbjct: 274 QHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHARVRATNFDANL 333
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++ AL+ MY KCG A F ++K D WN +IS Y +G + A+ ++ M
Sbjct: 334 LVSNALVHMYGKCGCLDEALDVFHSMKLK--DEISWNTIISSYAYHGHSDQALLLYQEMD 391
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ VKP +FV +LSAC H G V L F M DD +KP HFGC++DLLGR GRL
Sbjct: 392 LQGVKPTEVTFVGLLSACSHGGLVADGLDYFYRMQDDHRIKPSVPHFGCIIDLLGRGGRL 451
Query: 304 DEARELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA +++ +P +V + SLLGAC H + G A ++ + P +V+LSNIY
Sbjct: 452 AEAELVLKSMPIQANAVQWMSLLGACKTHGDLKRGVRAADQVVDRVPWTSGGYVLLSNIY 511
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A GRW+DV +IR+++ R + K PG S
Sbjct: 512 AAAGRWKDVEKIRKIMAARGVKKSPGKS 539
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHG--LTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
E + V + ++I C + + R++H L+L + L++MY KCG LP A
Sbjct: 57 ELDPVGYAALIRRCGAANAISAARRLHSHILSLPHSNSQPPFLANLLIEMYGKCGRLPYA 116
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F+ + SRN+ TW +A NG +A+ F + G +PD T++ +++
Sbjct: 117 RELFESMP-SRNVHTWTVAMAAFSHNGCHSEALVFFRRMYQSGERPDRVTFSVILA---- 171
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
A +A+ G+E H + + L + +
Sbjct: 172 -----------------------------AIAQMGAAAIDQGREIHRYARISGLLPNVVV 202
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TA+ISMY KCG+ AR F++ + K + WNAM++ Y +G A+E+F M
Sbjct: 203 GTAVISMYGKCGRLDDARAAFEELQWK--NSVTWNAMMTNYKLDGRDREALELFREMHD- 259
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+S + A+++A G +AL ++ M D L PKQ F ++D+ L +
Sbjct: 260 ---ADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAELSALKQ 316
Query: 306 AREL 309
R +
Sbjct: 317 GRAI 320
>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 203/382 (53%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ T SV+++ AS+ +Q VH L +K ++ ++ AL+DMY K G L CA VF
Sbjct: 40 DEYTLPSVLNSFASMKVMQNAISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVF 99
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ D +W S+++G+S G
Sbjct: 100 SKM------------------------------------VDKDVVSWTSLVTGYSHNGSY 123
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KLF KM+ +G+ P V SVLSACA+L+ + G++ H ++++ L S+ +L
Sbjct: 124 EEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSL 183
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG A R FD + D W A+I GY +NG + +++ +D M KP
Sbjct: 184 VTMYAKCGSIVDANRAFDNMPTR--DVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKP 241
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +L AC H G + F MD +G+KP EH+ CM+DLLGRSG+L EA+ L
Sbjct: 242 DYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGL 301
Query: 310 IREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++ P V+ +LL AC H +LGE A L E+EP N P+V+LSN+Y+ G+W
Sbjct: 302 LNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKW 361
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
ED RIR+++ R + K PG S
Sbjct: 362 EDAARIRRLMRSRGICKEPGYS 383
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WNS+I G + G +A F+KM+S M + SVL++ A + ++ H
Sbjct: 5 DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+I+ + + ALI MY K G+ A F + K D W ++++GY NG
Sbjct: 65 CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDK--DVVSWTSLVTGYSHNGS 122
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
YE A+++F M+ V P+ + +VLSAC +D QI + GL+
Sbjct: 123 YEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKS-GLESSLSVDN 181
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+V + + G + +A +P V + +L+
Sbjct: 182 SLVTMYAKCGSIVDANRAFDNMPTRDVISWTALI 215
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 116/246 (47%), Gaps = 16/246 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + SV+SACA L + FG+Q+H +K +S + +LV MY KCG + A+
Sbjct: 140 PDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANRA 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +R++++W +I G NGR + +++ ++ + G KPD T+ ++ S G+
Sbjct: 200 FDNMP-TRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGL 258
Query: 129 RFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
FE M G+ P C+ +L L+ E G + + + D
Sbjct: 259 LGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLA------EAKGLLNQMVVAPDAV 312
Query: 185 MATALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ AL++ ++ + A + + FE++P + + + + Y G++E A I L
Sbjct: 313 VWKALLAACRVHKELELGEMAAK--NLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRL 370
Query: 242 MQQEKV 247
M+ +
Sbjct: 371 MRSRGI 376
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
DD WN++I G R G E A+ F M+ +K + + +VL++ + A+ +
Sbjct: 4 DDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISV 63
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ G + + ++D+ + G+LD A + ++ + V + SL+
Sbjct: 64 HCLIIKT-GFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLV 114
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 220/384 (57%), Gaps = 9/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ S++ AC S L L+ GR+VH LK+ S+ ++ ++++Y KCG L A V
Sbjct: 145 PDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRV 204
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ +++ MI+ G E+A +F + + D W +MI GF +
Sbjct: 205 FEEM--PEDVVASTVMISSYSDQGLVEEAGAVFSRVR----RKDTVCWTAMIDGFVRNEE 258
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A + F MQ + P+ + VLSAC+ L AL++G+ H ++ + ++ + + A
Sbjct: 259 TNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNA 318
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY +CG A+ FD E+K D +N MISG NG+ A+E+F +M +++
Sbjct: 319 LINMYSRCGSIDEAQTVFD--EMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLR 376
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P + +FV VL+AC H G VD +IF M D+ ++P+ EH+GCMVDLLGR GRL+EA +
Sbjct: 377 PTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYD 436
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR + P + +LL AC H N +LGE++A +L++ + +V+LS++YA G+
Sbjct: 437 LIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGK 496
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W++ ++R + + + K PG S+
Sbjct: 497 WKEAAQVRAKMKEAGMQKEPGCSS 520
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 46/333 (13%)
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-----------AHEGFK----PDPATW 116
L+ SR+I + A ++ NG S+ +FE L A F+ P+ +
Sbjct: 56 LQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLY 115
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
++I GF G EA +L+ +M ++P + S+L AC AL+ G+E H ++
Sbjct: 116 TALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALK 175
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQF--------------------------- 209
+ + + ++ +Y KCG+ ARR F++
Sbjct: 176 LGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVF 235
Query: 210 -EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
++ D W AMI G+ RN E A+E F MQ E V+PN + V VLSAC G ++
Sbjct: 236 SRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALE 295
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ + M F ++ ++++ R G +DEA+ + E+ + V Y++++
Sbjct: 296 IGRWVHSYM-RKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354
Query: 329 WCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
+ S E+ M + + P N T +L+
Sbjct: 355 SMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLN 387
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 204/381 (53%), Gaps = 40/381 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T VI C LQ GR +H + LK SD + +LVDMY KC +
Sbjct: 99 PDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVV------ 152
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A LFE + D TW MI ++
Sbjct: 153 --------------------------EDAQRLFERM----LSKDLVTWTVMIGAYADCNA 182
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+E+ LF++M+ G+VP + +V++ACA L A+ + + +++R + D + TA
Sbjct: 183 -YESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTA 241
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KCG AR FD+ +K + W+AMI+ YG +G + A+++F +M +
Sbjct: 242 MIDMYAKCGSVESAREVFDR--MKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAIL 299
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV++L AC HAG +++ L+ F M ++ ++P +H+ CMVDLLGR+GRLDEA
Sbjct: 300 PNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALR 359
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI + E ++ +LLGAC H +L E+ A L E++P+NP +V+LSNIYA G+
Sbjct: 360 LIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGK 419
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
WE V + R M+ R+L K+PG
Sbjct: 420 WEKVAKFRDMMTQRKLKKIPG 440
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 25/289 (8%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTM----IAGMMLNGRSEK-----AMELFEG 103
+D+ L+C NVF + +++ T+ IA +L ++ A LF+G
Sbjct: 7 IDLLLRC------RNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDG 60
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L D TW+ M+ GF++ G + F ++ G+ P + V+ C D +
Sbjct: 61 LTMR----DSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTD 116
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L++G+ H V++ L D + +L+ MY KC A+R F++ K D W MI
Sbjct: 117 LQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSK--DLVTWTVMI 174
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA-LQIFTMMDDDFG 282
Y YES V +FD M++E V P+ + V V++AC G + +A ++ + F
Sbjct: 175 GAYADCNAYESLV-LFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFS 233
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
L M+D+ + G ++ ARE+ + E V + +++ A H
Sbjct: 234 LDVILG--TAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYH 280
>gi|297839569|ref|XP_002887666.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333507|gb|EFH63925.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/382 (35%), Positives = 216/382 (56%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T +VI+AC L +L+ G+Q+H K D ++ + L+DMY KCG A +F
Sbjct: 297 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVASTLLDMYSKCGSPMEACKLF 356
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ IL N+MI GR + A +FE + ++ +WNSM +GFSQ G
Sbjct: 357 SEVESYDTILL-NSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNSMTNGFSQNGCP 411
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E + F +M + ++SV+SACA +S+L LG++ L+ D+ ++++L
Sbjct: 412 VETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARATIVGLDSDQIVSSSL 471
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I +Y KCG RR FD +K D+ WN+MISGY NG A+++F M ++P
Sbjct: 472 IDLYCKCGSVENGRRVFDTM-VKSDEVP-WNSMISGYATNGHGFEAIDLFKKMSIAGIRP 529
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+ VL+AC + G V++ +F M D G P +EHF CMVDLL R+G ++EA +L
Sbjct: 530 TQITFMVVLTACNYCGLVEEGRLLFEAMKLDHGFVPDKEHFSCMVDLLARAGYVEEAIDL 589
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ E+P + S++ S+L C + +G+++A K+ E+EPEN +V LS I+A G W
Sbjct: 590 VEEMPFDADASMWSSVLRGCVANGYKAMGKKVAEKIIELEPENSVAYVQLSAIFATSGDW 649
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E +R+++ + ++K PG S
Sbjct: 650 ESSALVRKLMRENNVSKNPGSS 671
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 162/346 (46%), Gaps = 36/346 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+++T +V+ ACA L L+ G+Q+H L + D+ + ++LV++Y KCG L A +
Sbjct: 165 ADAITLTTVLKACAELEALKRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYM 224
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+++ G + + +T+I+G GR ++ LF+ ++ WNSMISG+ M
Sbjct: 225 LEQI-GEPDDHSLSTLISGYANCGRVNESRRLFDRKSNRCV----ILWNSMISGYIANNM 279
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+FEA LF +M++ S + + +V++AC L L+ GK+ H H + L D +A+
Sbjct: 280 KFEALVLFNEMRNETWEDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLVDDIVVAST 338
Query: 189 LISMYMKCGQPSWARRFFDQFE-----------------------------IKPDDPAFW 219
L+ MY KCG P A + F + E I+ W
Sbjct: 339 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 398
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N+M +G+ +NG +E F M + + + S +V+SAC + Q+F
Sbjct: 399 NSMTNGFSQNGCPVETLEYFSQMHKLDLPTDEVSLSSVISACASISSLGLGEQVFARA-T 457
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL Q ++DL + G ++ R + + + ++S++
Sbjct: 458 IVGLDSDQIVSSSLIDLYCKCGSVENGRRVFDTMVKSDEVPWNSMI 503
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 182/440 (41%), Gaps = 101/440 (22%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ ++ +C++ RQ +GL LK S ++ L+ +Y + G + A N+F E+
Sbjct: 9 YVRLLQSCSNRNRETLWRQTNGLFLKKGFISSIVIVANHLLQIYSRSGKMGIARNLFDEM 68
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN +WNTMI G M +G ++ F+ + D +WN +ISGF++ G A
Sbjct: 69 P-ERNYFSWNTMIEGYMNSGDKGTSLRFFDMMPER----DGYSWNVVISGFAKAGELSVA 123
Query: 133 FKLFEKMQSTGMVP----------------------SLK------CVTSVLSACADLSAL 164
+LF+ M +V LK +T+VL ACA+L AL
Sbjct: 124 RRLFDAMPEKDVVTLNSLLHGYILNGYSEEALRLFKELKFSADAITLTTVLKACAELEAL 183
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA------- 217
K GK+ H ++ + D M ++L+++Y KCG A +Q +PDD +
Sbjct: 184 KRGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIG-EPDDHSLSTLISG 242
Query: 218 -----------------------FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
WN+MISGY N A+ +F+ M+ E + +S +
Sbjct: 243 YANCGRVNESRRLFDRKSNRCVILWNSMISGYIANNMKFEALVLFNEMRNETWE-DSRTL 301
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
AV++AC G ++ Q+ FGL ++D+ + G EA +L E
Sbjct: 302 AAVINACIGLGFLETGKQMHCHA-CKFGLVDDIVVASTLLDMYSKCGSPMEACKLFSE-- 358
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
V Y ++L LNS + +Y GR +D R+
Sbjct: 359 ---VESYDTIL------LNS-----------------------MIKVYFSCGRIDDAKRV 386
Query: 375 RQMINDRQLTKLPGISAGIT 394
+ I ++ L ++ G +
Sbjct: 387 FERIENKSLISWNSMTNGFS 406
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 207/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T S++ ACASL+ LQ G Q+H +K+ + + AL+DMY KCG
Sbjct: 345 PNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCG-------- 396
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R E +++LF E +WN++I G+ Q G
Sbjct: 397 ------------------------RMENSLQLFS----ESPNCTDVSWNTVIVGYVQAGN 428
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LF+ M + + +SVL ACA ++AL+ G + H ++ +K+ + A
Sbjct: 429 GEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNA 488
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD ++ D WNAMISGY +G Y A++ F+ M + + K
Sbjct: 489 LIDMYAKCGNIKDARLVFDM--LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECK 546
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV +LSAC +AG +D+ F M +++ ++P EH+ CMV LLGRSG LD+A +
Sbjct: 547 PDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAK 606
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ E+P EP+V V+ +LL AC H + +LG A ++ E+EPE+ V+LSNIYA R
Sbjct: 607 LVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARR 666
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +V IR + + + K PG+S
Sbjct: 667 WGNVASIRTSMKRKGIRKEPGLS 689
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 43/355 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ TF SV+ AC L G+ VHG K + +G L+D+Y+K G + A
Sbjct: 243 KPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQ 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ K D W+ MI+ ++Q
Sbjct: 303 VFEEMP------------------------------------KDDVIPWSFMIARYAQSE 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F +M+ ++P+ + S+L ACA L L+LG + H HV++ L+ + ++
Sbjct: 327 QSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSN 386
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ + + F + D WN +I GY + G E A+ +F M + +V
Sbjct: 387 ALMDMYAKCGRMENSLQLFSESPNCTD--VSWNTVIVGYVQAGNGEKALILFKDMLECQV 444
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEA 306
+ ++ +VL AC ++ QI ++ + K G ++D+ + G + +A
Sbjct: 445 QGTEVTYSSVLRACAGIAALEPGSQIHSLSVKT--IYDKNTVVGNALIDMYAKCGNIKDA 502
Query: 307 RELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
R + L E +++++ H L +M E +P+ T ILS
Sbjct: 503 RLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILS 557
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 129/310 (41%), Gaps = 39/310 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N F +V+ S + + G VH K+ SD +GTAL+D Y CG CA
Sbjct: 142 ELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQ 201
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +W M++ + +
Sbjct: 202 VFDAIE------------------------------------YKDMVSWTGMVACYVENE 225
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ KLF +M+ G P+ SVL AC L +GK HG + ++ +
Sbjct: 226 CFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGV 285
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI +Y+K G A + F+ E+ DD W+ MI+ Y ++ + E A+E+F M++ V
Sbjct: 286 ELIDLYIKSGDVDDALQVFE--EMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLV 343
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + ++L AC + QI + GL ++D+ + GR++ +
Sbjct: 344 LPNQFTLASLLQACASLVDLQLGNQIHCHV-VKVGLDMNVFVSNALMDMYAKCGRMENSL 402
Query: 308 ELIRELPEPT 317
+L E P T
Sbjct: 403 QLFSESPNCT 412
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 53/320 (16%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S E N+ + S++ +C G+ +H +K D L++ Y+K LP A
Sbjct: 39 SPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDA 98
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F E+ RN +++ T+I G+SQ
Sbjct: 99 AKLFDEMP-DRNTVSFVTLI-----------------------------------QGYSQ 122
Query: 126 LGMRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+RF EA LF ++Q G + ++VL KLG H V + + D
Sbjct: 123 C-LRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAF 181
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ TALI Y CG AR+ FD E K D W M++ Y N +E ++++F M+
Sbjct: 182 VGTALIDCYSVCGYAECARQVFDAIEYK--DMVSWTGMVACYVENECFEESLKLFSRMRI 239
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-----GC-MVDLLG 298
KPN+ +F +VL AC L++F + G K + G ++DL
Sbjct: 240 VGFKPNNFTFASVLKAC-------VGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYI 292
Query: 299 RSGRLDEARELIRELPEPTV 318
+SG +D+A ++ E+P+ V
Sbjct: 293 KSGDVDDALQVFEEMPKDDV 312
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 2/139 (1%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M EC + VT+ SV+ ACA + L+ G Q+H L++K +T++G AL+DMY KCG
Sbjct: 439 MLEC-QVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCG 497
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF L+ + ++WN MI+G ++G +A++ FE + KPD T+ ++
Sbjct: 498 NIKDARLVFDMLR-EHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGIL 556
Query: 121 SGFSQLGMRFEAFKLFEKM 139
S S G+ F+ M
Sbjct: 557 SACSNAGLLDRGQAYFKSM 575
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 211/383 (55%), Gaps = 8/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ TF ++ AC+S+ + +Q+H +K+ S+ +L+++Y K G + A +F
Sbjct: 117 NAYTFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLF 176
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+ ++WN+MI G G E A E+F + +W SMISG G
Sbjct: 177 DQVD-QRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNI----ISWTSMISGCVGAGKP 231
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +MQ+ G+ + S L ACADL L GK H ++ + ++ D + L
Sbjct: 232 KEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVL 291
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A F + E K + W AMISGY +G A+E F MQ V+P
Sbjct: 292 IDMYAKCGDLEEAIEVFRKMEEK--GVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEP 349
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F +L+AC HAG V +A +F M+ G KP EH+GCMVDLLGR+G L EA EL
Sbjct: 350 NQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEEL 409
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P +P +++ +LL AC H N +LG+++ L +++P + ++ L++I+A G W
Sbjct: 410 IENMPVKPNAAIWGALLNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEW 469
Query: 369 EDVGRIRQMINDRQLTKLPGISA 391
R+R+ + ++ ++KLPG S
Sbjct: 470 NQAARVRRQMKEQGVSKLPGCSV 492
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 167/400 (41%), Gaps = 84/400 (21%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL--KCGCL 62
LS E N+ + ++ C+++ L RQ+HG LK D + + L+ G L
Sbjct: 12 LSSESNAAQTLHLLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSL 68
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF + N WNTMI G + E+A+ L+ + + + T+
Sbjct: 69 AYARTVFDRI-FRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTF------ 121
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
P L L AC+ +SA + ++ H H+I+ +
Sbjct: 122 -----------------------PFL------LKACSSMSASEETQQIHAHIIKMGFGSE 152
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+++Y K G AR FDQ + + D WN+MI GY + GE E A EIF+ M
Sbjct: 153 IYTTNSLLNVYSKSGDIKSARLLFDQVDQR--DTVSWNSMIDGYTKCGEIEMAYEIFNHM 210
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD------------------DFGLK 284
+ N S+ +++S C AG +AL +F M D G+
Sbjct: 211 PER----NIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVL 266
Query: 285 PK--------QEH-------FGC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ ++H GC ++D+ + G L+EA E+ R++ E VSV+ +++
Sbjct: 267 DQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGY 326
Query: 329 WCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YAGL 365
H E MK+Q +EP T IL+ +AGL
Sbjct: 327 AIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGL 366
>gi|449447707|ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 217/396 (54%), Gaps = 20/396 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC-LPCAH 66
PN+ + V+ +C +L + VH LK ++ TA+VD Y + + A
Sbjct: 140 RPNNFIYPHVLRSCPDVLGSNATKMVHTQVLKSGFGGYPVVQTAIVDSYSRFSSDIGSAR 199
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+ R +++W MI+G G + A+ELFE + D WN++I+G +Q
Sbjct: 200 QMFDEML-ERTVVSWTAMISGYARLGNFDSAIELFESMPER----DVPAWNALIAGCAQN 254
Query: 127 GMRFEAFKLFEKMQSTGM---------VPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
G EA LF++M + P+ + S LSAC L LGK HG+V +
Sbjct: 255 GFFCEAIWLFKRMVLLALEGNNNDRENKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKT 314
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+D ++ AL+ MY KCG ARR FD +K + WN++I+ +G SA++
Sbjct: 315 YPGQDSFISNALLDMYGKCGNLKVARRVFDMITLK--NLTSWNSLINCLALHGHSGSAID 372
Query: 238 IFDLMQQ--EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+F + + VKPN +FV VL+AC H G V+K F MM D+ ++P+ EHFGC++D
Sbjct: 373 LFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGCLID 432
Query: 296 LLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
LLGR+GR +EA E++R + EP V+ SLL AC H SDL E KL EM+P+N
Sbjct: 433 LLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKNGGY 492
Query: 355 FVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L+NIYA G+W++V ++R+++ ++ K PG S
Sbjct: 493 RIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCS 528
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++PN T S +SAC L G+ +HG K D+ I AL+DMY KCG L A
Sbjct: 281 NKPNKTTLGSALSACGHTGMLHLGKWIHGYVFKTYPGQDSFISNALLDMYGKCGNLKVAR 340
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH--EGFKPDPATWNSMISGFS 124
VF ++ +N+ +WN++I + L+G S A++LF L H +G KP+ T+ +++ +
Sbjct: 341 RVF-DMITLKNLTSWNSLINCLALHGHSGSAIDLFAELIHCGDGVKPNEVTFVGVLNACT 399
Query: 125 QLGMRFEAFKLFEKMQ 140
G+ + + FE M+
Sbjct: 400 HGGLVEKGYSYFEMMR 415
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 207/380 (54%), Gaps = 39/380 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
T +S++ C+ L G+ +HG ++ +S+ ++ TA+VD+Y KCG L A VF
Sbjct: 333 TTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVFNR 391
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+K RN++TW +M+ G +Q G +
Sbjct: 392 MK-DRNVITWT-----------------------------------AMLVGLAQNGHAED 415
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A +LF +MQ G+ + S++ +CA L +LK G+ HGH+ R D TAL+
Sbjct: 416 ALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVD 475
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ + A R F I D WN+MI+GYG +G AV I+ M +E +KPN
Sbjct: 476 MYAKCGKINLAERIFSHGSISKD-VVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQ 534
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+++LSAC H+ V++ + +F M+ D ++P ++H+ C+VDLL R+GR +EA+ LI
Sbjct: 535 TTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIE 594
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++P +P +V +LL C H N +LG + + KL ++ NP +++LSNIYA RW+
Sbjct: 595 KMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDK 654
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V IR ++ +R L K PG S
Sbjct: 655 VDYIRGLMRNRGLKKTPGYS 674
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 21/298 (7%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+N ++MI+ ++ G+ +A +F+G+ ++ D WNS+I G+ Q G AF+L
Sbjct: 163 KNRFVGSSMISFLVKFGKIGEAQRVFDGMPNK----DVVCWNSIIGGYVQAGCFDVAFQL 218
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F +M +G+ PS +TS++ AC + LKLGK HG+V+ L D + T+ + MY K
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSK 278
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
G AR F +++ + WNAMISG RNG + ++F + + + + V
Sbjct: 279 MGDIESARWVF--YKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIV 336
Query: 256 AVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
++L C + K L + + L +VDL + G L +A + +
Sbjct: 337 SLLQGCSQTASLATGKILHGCAIRSFESNLILST----AIVDLYSKCGSLKQATFVFNRM 392
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPE----NPTPFVILSNIYAGLG 366
+ V + ++L L + E A++L +M+ E N FV L + A LG
Sbjct: 393 KDRNVITWTAMLVG----LAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLG 446
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 76/131 (58%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVTF+S++ +CA L L+ GR +HG ++ D + TALVDMY KCG + A +F
Sbjct: 431 NSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIF 490
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
S++++ WN+MI G ++G +A+ ++ + EG KP+ T+ S++S S +
Sbjct: 491 SHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLV 550
Query: 130 FEAFKLFEKMQ 140
+ LF M+
Sbjct: 551 EQGISLFNSME 561
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 10/256 (3%)
Query: 77 NILTWNTMIAGMMLNGRSE-KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
N L+ + +A ++ S+ +++E + + F+P N+M+ G+ Q G E +L
Sbjct: 58 NSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLEL 117
Query: 136 FEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F M+S + V S C T L ACA ++G E + + K+ + +++IS +
Sbjct: 118 FGLMRSRNLEVDSCSC-TFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLV 176
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
K G+ A+R FD K D WN++I GY + G ++ A ++F M +KP+ +
Sbjct: 177 KFGKIGEAQRVFDGMPNK--DVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITM 234
Query: 255 VAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+++ ACG G++ K + + + GL VD+ + G ++ AR + +
Sbjct: 235 TSLIQACGGIGNLKLGKCMHGYVL---GLGLGNDILVLTSFVDMYSKMGDIESARWVFYK 291
Query: 313 LPEPTVSVYHSLLGAC 328
+P + +++++ C
Sbjct: 292 MPTRNLVSWNAMISGC 307
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
K TH +I L+ D+ +AT L+ Y AR FDQF +P NAM+ GY
Sbjct: 49 KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQF-FQPKG-LLCNAMLCGYL 106
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
++G Y +E+F LM+ ++ +S S L AC + + ++I + + G++ +
Sbjct: 107 QSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEK-GMEKNR 165
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
M+ L + G++ EA+ + +P V ++S++G
Sbjct: 166 FVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGG 205
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 218/384 (56%), Gaps = 37/384 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ S+ISAC + GR +HGL +K + I AL+ MYLK
Sbjct: 299 EPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSD------- 351
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G ++A+ +FE L FK D +WNS+++G SQ G
Sbjct: 352 -----------------------YGSMKEALCIFESLE---FK-DRVSWNSILTGLSQTG 384
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M+S M ++VL +C+DL+ +LG++ H ++ L +E +++
Sbjct: 385 SSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSS 444
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG ARR F+ E + WNA++ GY ++G+ A+++F LM+++KV
Sbjct: 445 SLIFMYSKCGIIEDARRSFE--EASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKV 502
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +FVAVL+AC H G V++ + M+ D+G+ P+ EH+ C VDL GRSGRL+EA+
Sbjct: 503 KMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAK 562
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI E+P +P +V+ + LGAC N +L ++A L EMEPE +V+LSN+Y L
Sbjct: 563 ALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLM 622
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ ++++++ +R + K+PG S
Sbjct: 623 RWDEKAKVKRLMKERGVKKVPGWS 646
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 157/387 (40%), Gaps = 73/387 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF S++ A G+QVH + +K+ + G+AL+DMY KC L A+
Sbjct: 96 ELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYL 155
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
F + N ++WN MI G G E A L + + EG K D T+
Sbjct: 156 SFLSI-SKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDAD 214
Query: 117 ------------------------NSMISGFSQLGMRFEA-------------------- 132
N++I+ +S+ G +A
Sbjct: 215 FCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLL 274
Query: 133 ------------FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
FKL MQ G P L TS++SAC + + G+ HG VI+
Sbjct: 275 AAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFE 334
Query: 181 KDESMATALISMYMKC--GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ ++ ALISMY+K G A F+ E K D WN++++G + G E AV+
Sbjct: 335 QSVPISNALISMYLKSDYGSMKEALCIFESLEFK--DRVSWNSILTGLSQTGSSEDAVKS 392
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M+ + + SF AVL +C QI + +GL+ + ++ +
Sbjct: 393 FLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLA-LKYGLESNEFVSSSLIFMYS 451
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLL 325
+ G +++AR E + + +++L+
Sbjct: 452 KCGIIEDARRSFEEASKNSSITWNALM 478
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 20/305 (6%)
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H++ +L ++ T N ++ G A LF+ + D +WN+MI+G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR----DSVSWNTMIAGHIN 76
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G ++ + M+S G S+L A LG++ H +I+ ++
Sbjct: 77 CGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYA 136
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+AL+ MY KC + A F I + WNAMI+GY + G+ E+A + D M+QE
Sbjct: 137 GSALLDMYAKCEKLEDAYLSF--LSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQE 194
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
K + ++ +L A + Q+ + GL+ ++ + G LD+
Sbjct: 195 GEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKH-GLELVNTMCNALITSYSKCGSLDD 253
Query: 306 AREL------IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVI 357
A+ + IR+L ++SLL A DL ++ + +QE EP+ + I
Sbjct: 254 AKRIFDSSAGIRDLV-----TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSI 308
Query: 358 LSNIY 362
+S +
Sbjct: 309 ISACF 313
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/383 (35%), Positives = 205/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF+ VI+AC+ L G+QVH LK+ +S + TALVDMY KC + A
Sbjct: 308 PSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKG 367
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L+ +PD W SMI G+ Q G
Sbjct: 368 FDYLQ------------------------------------EPDIVLWTSMIGGYVQNGE 391
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A L+ +M+ G++P+ + SVL AC+ L+AL+ GK+ H ++ + + +A
Sbjct: 392 NEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSA 451
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L +MY KCG F + + D WNAMISG +NG + A+E+F+ MQ E K
Sbjct: 452 LSTMYAKCGCLKDGTLVFRRMPAR--DVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV +LSAC H G V++ F MM D+FG+ P+ EH+ CMVD+L R+G+L EA E
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKLKEAIE 569
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ + ++ +LGAC + N +LG KL E+ + + +V+LS+IY+ LGR
Sbjct: 570 FTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYSALGR 629
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV R+R+M+ R ++K PG S
Sbjct: 630 WEDVERVRRMMKLRGVSKEPGCS 652
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 161/355 (45%), Gaps = 47/355 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F SV+SA + G+Q+H + +K S +G ALV MY KCG L
Sbjct: 208 NEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSL------- 260
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ A++ FE + + + TW++MI+G++Q G
Sbjct: 261 -------------------------DDALQTFETSSDK----NSITWSAMITGYAQSGDS 291
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A KLF M +G+ PS V++AC+DL A GK+ H ++++ + TAL
Sbjct: 292 DKALKLFSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTAL 351
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC AR+ FD ++ D W +MI GY +NGE E A+ ++ M+ E + P
Sbjct: 352 VDMYAKCSSIVDARKGFDY--LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 250 NSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLK-PKQEHFGCMVDLLGRSGRLDEAR 307
N + +VL AC +++ QI + FGL+ P M + G L +
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTM---YAKCGCLKDGT 466
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNI 361
+ R +P V +++++ + G+E +EM+ E P +V NI
Sbjct: 467 LVFRRMPARDVISWNAMISGL---SQNGCGKEALELFEEMQLEGTKPDYVTFVNI 518
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 150/366 (40%), Gaps = 46/366 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +F + + LQ G+ +H +K S I +LV++Y KC L A V
Sbjct: 4 PSNRSFFTALLQYTHNRSLQKGKALHAQIIK-SSSSCVYIANSLVNLYAKCQRLREAKFV 62
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG- 127
F+ ++ D +WN +I+G+SQ G
Sbjct: 63 FERIQ------------------------------------NKDVVSWNCIINGYSQHGP 86
Query: 128 -MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+LF++M++ P+ V +A + L G+ H I+ D +D +
Sbjct: 87 SGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVG 146
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++L++MY K G AR+ FD + + W MISGY A+ +F LM++E+
Sbjct: 147 SSLMNMYCKAGLTPEARKVFDT--MPERNSVSWATMISGYASQKLAAEALGLFRLMRREE 204
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
N F +VLSA V+ QI + + GL +V + + G LD+A
Sbjct: 205 EGENEFVFTSVLSALTLPELVNNGKQIHCIAVKN-GLLSIVSVGNALVTMYAKCGSLDDA 263
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAG 364
+ + + +++ +SD ++ +M L + P T FV + N +
Sbjct: 264 LQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFT-FVGVINACSD 322
Query: 365 LG-RWE 369
LG WE
Sbjct: 323 LGAAWE 328
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 216/384 (56%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT I +S CA + L+ G+++H + + A++DMY+KCG L A++
Sbjct: 221 RPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANS 280
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + +R ++W TMI G G E A LF+ + P WN++++G+ Q
Sbjct: 281 VFERIS-NRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFP----WNALMAGYVQNK 335
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ + + P+ + ++LSAC+ L AL++G H ++ R L+ ++ T
Sbjct: 336 QGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGT 395
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG A F+ EI + W +MI G +G + A+E F M +
Sbjct: 396 SLVDMYAKCGNIKKAICVFN--EIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGL 453
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ VLSAC HAG V+ Q F++M + L+ K +H+ CM+DLLGR+G LDEA
Sbjct: 454 QPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAE 513
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+L+ +P +P V+ +L AC H N LGE+ AMKL E++P + +V+L+N+YA
Sbjct: 514 QLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEAN 573
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+ ++R M+ + K+PG S
Sbjct: 574 MRKKADKVRVMMRHLGVEKVPGCS 597
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 174/366 (47%), Gaps = 15/366 (4%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +TF +I ACA L Y +G V G K+ +D + A + + G + A
Sbjct: 116 SARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVRGPMAFA 175
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISGF 123
+F E R++++WNT+I G + +G +A+ELF LA +G +PD T +SG
Sbjct: 176 RRLFDE-SPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGC 234
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q+G +L E + + G ++C +++A D+ E V N+
Sbjct: 235 AQMGDLELGKRLHEFVDNKG----VRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTA 290
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLM 242
T +I + + G AR FD+ P+ F WNA+++GY +N + + A+ +F M
Sbjct: 291 VSWTTMIVGHARLGMMEDARMLFDEM---PERDVFPWNALMAGYVQNKQGKEAIALFHEM 347
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+ KV PN + V +LSAC G ++ + + +D L +VD+ + G
Sbjct: 348 QKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRH-KLHLSVALGTSLVDMYAKCGN 406
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSN 360
+ +A + E+P + S++ H ++D E ++ + ++P+ T +LS
Sbjct: 407 IKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSA 466
Query: 361 -IYAGL 365
+AGL
Sbjct: 467 CCHAGL 472
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 202/379 (53%), Gaps = 39/379 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + F V+ C L GRQ+H +K+ +S+ +GT LVD Y+KCG + A+
Sbjct: 286 ELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYR 345
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + +P+ +W+++ISGFSQ G
Sbjct: 346 SFGRIS------------------------------------EPNDVSWSALISGFSQSG 369
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ K+F ++S G+V + TSV ACA + L +G + HG I+ L +
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES 429
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+++MY KCG+ +ARR F+ + +PD A W A+ISGY +G A+ F MQ V
Sbjct: 430 AMVTMYSKCGRLDYARRAFESID-EPDAVA-WTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN+ +F+AVL+AC H+G V +A Q M D+G+KP +H+ CM+D R+G L EA
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEAL 547
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P EP + SLLG CW H + LG+ A L ++P + +++L N+Y+ G
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607
Query: 367 RWEDVGRIRQMINDRQLTK 385
+WE+ G +R+++ +R+L K
Sbjct: 608 KWEEAGHVRKLMAERELKK 626
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 150/372 (40%), Gaps = 75/372 (20%)
Query: 5 LSDEPNSVT---FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+ D SVT + + AC L L GR +H + K I L+ MY CG
Sbjct: 78 MDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGS 137
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
VF E+ +N+++W +I+ NG EK
Sbjct: 138 CIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEK------------------------- 171
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A +LF MQ++G+ P+ S+L +C S L+LGK+ H HVIRA LN
Sbjct: 172 ----------AIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNA 221
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ ++ TA+ +MY++CG A+ FD + + + W ++ GY + + E A+E+F
Sbjct: 222 NITVETAICNMYVRCGWLEGAKLVFDGMDAQ--NAVTWTGLMVGYTQAKKLEVALELFAR 279
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD--------------DFGLK--- 284
M E V+ + F VL C D QI + + DF +K
Sbjct: 280 MAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGD 339
Query: 285 -------------PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS----VYHSLLGA 327
P + ++ +SGRL++ ++ L V +Y S+ A
Sbjct: 340 IESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQA 399
Query: 328 CWCHLNSDLGEE 339
C N ++G +
Sbjct: 400 CAAQANLNMGSQ 411
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N + S+ G EA ++M + + + AC L +L G+ H + R
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
N S+ L+ MY CG ++ FD+ +K + W +IS Y +NGE E A+
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMK--NLVSWVIVISAYAKNGELEKAI 173
Query: 237 EIFDLMQQEKVKPNSASFVAVLSAC 261
+F MQ ++PNSA ++++L +C
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSC 198
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT SV+ ACA L L GR++H +K+ D ++G L+ MY KCG + A
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIR 368
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ D ++++++SG Q G
Sbjct: 369 FFDEMN------------------------------------PKDSVSFSAIVSGCVQNG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +F MQ +G+ P L + VL AC+ L+AL+ G +HG++I D +
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ S+AR F++ + D WNAMI GYG +G A+ +F + +
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMD--RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F+ +LS+C H+G V + F M DF + P+ EH CMVD+LGR+G +DEA
Sbjct: 511 KPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAH 570
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
IR +P EP V ++ +LL AC H N +LGEE++ K+Q + PE+ FV+LSNIY+ G
Sbjct: 571 HFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAG 630
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D IR D L K+PG S
Sbjct: 631 RWDDAAHIRITQKDWGLKKIPGCS 654
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 58/365 (15%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN T+ V+ AC+ LL ++ G ++H +SD + TALVD Y KCG L
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV- 161
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+A LF ++H D WN+MI+G S
Sbjct: 162 -------------------------------EAQRLFSSMSHR----DVVAWNAMIAGCS 186
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ +A +L +MQ G+ P+ + VL + AL GK HG+ +R +
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD-LMQ 243
+ T L+ MY KC +AR+ FD ++ + W+AMI GY + + A+E+FD ++
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVR--NEVSWSAMIGGYVASDCMKEALELFDQMIL 304
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKA-------LQIFTMMDDDFGLKPKQEHFGCMVDL 296
++ + P + +VL AC + + +++ +++D G ++ +
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLG--------NTLLSM 356
Query: 297 LGRSGRLDEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPT 353
+ G +D+A E+ P+ +VS + +++ C + N+ + + M+L ++P+ T
Sbjct: 357 YAKCGVIDDAIRFFDEMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 354 PFVIL 358
+L
Sbjct: 416 MLGVL 420
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 58/374 (15%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ ++ AC L +++H LK +D+ + L +YL C + A +F E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRF 130
P+P+ WN +I ++ G
Sbjct: 70 --------------------------------------PNPSVILWNQIIRAYAWNGPFD 91
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A L+ M G+ P+ VL AC+ L A++ G E H H L D + TAL+
Sbjct: 92 GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALV 151
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
Y KCG A+R F + D WNAMI+G G + AV++ MQ+E + PN
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 251 SASFVAVLSACGHA---GHVDKALQIFTMMDD-DFGLKPKQEHFGCMVDLLGRSGRLDEA 306
S++ V VL G A GH KAL + + D G+ ++D+ + L A
Sbjct: 210 SSTIVGVLPTVGEAKALGH-GKALHGYCVRRSFDNGVVVGTG----LLDMYAKCQCLLYA 264
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM---EPENPTPFVILSNIYA 363
R++ + + +++G ++ SD +E +M + +PTP V L ++
Sbjct: 265 RKIFDVMGVRNEVSWSAMIGG---YVASDCMKEALELFDQMILKDAMDPTP-VTLGSVLR 320
Query: 364 GLGRWEDVGRIRQM 377
+ D+ R R++
Sbjct: 321 ACAKLTDLSRGRKL 334
>gi|356522492|ref|XP_003529880.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Glycine max]
Length = 474
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/384 (37%), Positives = 212/384 (55%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF + SAC SL G+ +H +K + D TAL+DMY K G L A +
Sbjct: 45 PNQHTFNFLFSACTSLSSSSLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKL 104
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R + WN M+AG+ G + A+ELF + P W +MISG+S
Sbjct: 105 FDEMP-VRGVPRWNAMMAGLARFGDMDGALELFXSMPSRNVVP----WTTMISGYSWNKQ 159
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF M Q G++P+ + S+L ACA+L AL++G+ + + K+ +
Sbjct: 160 YDKALGLFLGMEQEKGIMPNAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASN 219
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY+KCG+ A R F++ + WN+M+ G +GE A+E++D M E
Sbjct: 220 AVLEMYVKCGKIDAAWRVFNEIG-SLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGT 278
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +FV +L AC G V K IF F + PK EH+GCMVDLLGR+G+L EA
Sbjct: 279 SPDDVTFVGLLLACTQGGMVKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQLREAY 338
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E+I+ + +P ++ +LLGAC H N +L E A L +EP NP +VILSNIYA G
Sbjct: 339 EVIQSMSMKPDSVIWGALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAG 398
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V ++R+++ ++TK G S
Sbjct: 399 QWDGVAKLRKVMKGSKITKSAGHS 422
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 144/299 (48%), Gaps = 17/299 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VT +S++ ACA+L L+ G++V K + A+++MY+KCG + A V
Sbjct: 178 PNAVTLVSILPACANLXALEIGQRVEAYARKNGFFKNXYASNAVLEMYVKCGKIDAAWRV 237
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+ +WN+M+ G+ ++G KA+EL++ + EG PD T+ ++ +Q GM
Sbjct: 238 FNEIGSLRNLCSWNSMVVGLAVHGECCKALELYDQMLGEGTSPDDVTFVGLLLACTQGGM 297
Query: 129 RFEAFKLFE-KMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +F+ K S ++P L+ C+ +L L +E + + + D
Sbjct: 298 VKKGRHIFKSKTTSFYIIPKLEHYGCMVDLLGRAGQL------REAYEVIQSMSMKPDSV 351
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + F ++P +P + + + Y G+++ ++ +M+
Sbjct: 352 IWGALLGACSFHGNVELAEIAAESLFVLEPWNPGNYVILSNIYASAGQWDGVAKLRKVMK 411
Query: 244 QEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDFGL-KPKQEHFGCMVDL 296
K+ ++ A H V K+ +IF ++D + + K + F C +DL
Sbjct: 412 GSKITKSAGHSFIEEGAQLHKFIVKDRSHPKSNEIFALLDGVYEMVKLTRSAFECHLDL 470
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 7/181 (3%)
Query: 106 HEGFKPDPATWNSMISGFS-QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
H KP +N +I +S + F L+ +++ G +P+ + SAC LS+
Sbjct: 4 HHSSKPTLFLYNKLIQAYSSHPQHQHRCFSLYSQIRLHGFLPNQHTFNFLFSACTSLSSS 63
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG+ H H I++ D ATAL+ MY K G AR+ FD+ ++ WNAM++
Sbjct: 64 SLGQMLHTHFIKSGFEPDLFAATALLDMYAKVGALELARKLFDEMPVR--GVPRWNAMMA 121
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G R G+ + A+E+F M V P + ++S DKAL +F M+ + G+
Sbjct: 122 GLARFGDMDGALELFXSMPSRNVVP----WTTMISGYSWNKQYDKALGLFLGMEQEKGIM 177
Query: 285 P 285
P
Sbjct: 178 P 178
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 232/449 (51%), Gaps = 68/449 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG-------- 60
P+ V+ S++S CA+L L+ G QVH +K Q+ G++L+DMY+KCG
Sbjct: 549 PDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYV 608
Query: 61 --CLPC--------------------AHNVFQELKG---SRNILTWNTMIAG----MMLN 91
C+P A ++FQE++ + + +T+ +++ LN
Sbjct: 609 FSCMPSRSVVSMNAIIAGYAQNDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLN 668
Query: 92 -GRSEKAMELFEGLAHEG----------------------------FKPDPATWNSMISG 122
GR + GL ++G + W ++ISG
Sbjct: 669 LGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISG 728
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+Q G EA +L+++M P SVL AC+ L++L G+ H + L+ D
Sbjct: 729 HTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSD 788
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
E +A++ MY KCG + + F++ K +D WN+MI G+ +NG E+A++IFD M
Sbjct: 789 ELTGSAVVDMYAKCGDMKSSVQVFEEMGSK-NDVISWNSMIVGFAKNGYAENALKIFDEM 847
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ +++P+ +F+ VL+AC HAG V + +IF +M + + P+ +H CM+DLLGR G
Sbjct: 848 KHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGF 907
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L EA E I +L EP ++ +LLGAC H + G A KL E+EPEN +P+V+LSNI
Sbjct: 908 LKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNI 967
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W++V +R+ + ++ L KLPG S
Sbjct: 968 YAASGNWDEVNSVRRAMREKGLRKLPGCS 996
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 40/338 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ V+S+CA L+ + G+QVH +K+ + ++ +L+DMY KCG L A +
Sbjct: 180 PNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKI 239
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD---------------- 112
F + + ++W MIAG + G E+A+++FE + G PD
Sbjct: 240 FDAVVDP-DTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGR 298
Query: 113 -----------PAT----WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
P T WN MISG + G EA F+ M TG+ + + SVLSA
Sbjct: 299 LDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
A L AL G H I+ LN + + ++LI+MY KC + A++ FD + + +
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDER--NLV 416
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-M 276
WNAM+ GY +NG +++F M+ P+ ++ ++LSAC ++ Q+ + +
Sbjct: 417 LWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFI 476
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR---ELIR 311
+ +F E+ +VD+ + G L+EAR E IR
Sbjct: 477 IKHNFEYNLFVEN--TLVDMYAKCGALEEARQQFEFIR 512
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 178/376 (47%), Gaps = 49/376 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV+SA ASL L +G VH +K S+ +G++L++MY KC + A VF L
Sbjct: 351 TLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDAL 410
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN++ W N+M+ G++Q G +
Sbjct: 411 D-ERNLVLW-----------------------------------NAMLGGYAQNGYASKV 434
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
KLF +M+ G P TS+LSACA L L++G++ H +I+ + + + L+ M
Sbjct: 435 MKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDM 494
Query: 193 YMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y KCG AR+ QFE I+ D WNA+I GY + + + A +F M + + P+
Sbjct: 495 YAKCGALEEARQ---QFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDE 551
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
S ++LS C + +++ Q+ + GL+ ++D+ + G ++ AR +
Sbjct: 552 VSLASILSGCANLQALEQGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFS 610
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVILSNIYAGLGRWE 369
+P +V ++++ + +DL E + + QEM+ E NP+ S + A G ++
Sbjct: 611 CMPSRSVVSMNAIIAG---YAQNDLVEAIDL-FQEMQNEGLNPSEITFASLLDACTGPYK 666
Query: 370 -DVGR-IRQMINDRQL 383
++GR I +I R L
Sbjct: 667 LNLGRQIHCLIQKRGL 682
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 155/347 (44%), Gaps = 43/347 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ S++SACA L L+ GRQ+H +K + + + LVDMY KCG L A
Sbjct: 448 PDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQ 507
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ N+ +WN +I G + ++A +F + +G PD +
Sbjct: 508 FEFIRNRDNV-SWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVS------------- 553
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ S+LS CA+L AL+ G++ H ++++ L ++
Sbjct: 554 ----------------------LASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSS 591
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY+KCG AR F + NA+I+GY +N E A+++F MQ E +
Sbjct: 592 LIDMYVKCGAIEAARYVFSCMPSRS--VVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLN 648
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAR 307
P+ +F ++L AC ++ QI ++ GL + G ++ + S R +A
Sbjct: 649 PSEITFASLLDACTGPYKLNLGRQIHCLIQKR-GLLYDGDFLGVSLLVMYMNSQRKTDAD 707
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
L E P ++ + + + H + EE QEM N P
Sbjct: 708 ILFSEFQYPKSTILWTAIIS--GHTQNGCSEEALQLYQEMHRNNARP 752
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 117/247 (47%), Gaps = 38/247 (15%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
+ +H TLK S +G+A+VD+Y KCG + A F +L+
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLE----------------- 143
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
K D WNS++S +S+ G + F +Q+ G+ P+
Sbjct: 144 -------------------KRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFT 184
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
VLS+CA L + LGK+ H VI+ + +LI MY KCG AR+ FD
Sbjct: 185 YAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAV- 243
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ PD + W AMI+GY + G E A+++F+ MQ+ + P+ +FV V++AC G +D A
Sbjct: 244 VDPDTVS-WTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRLDDA 302
Query: 271 LQIFTMM 277
+F M
Sbjct: 303 CDLFVQM 309
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 10/212 (4%)
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
A + K H ++ + +A++ +Y KCG +A + F+Q E + D WN++
Sbjct: 96 ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKR--DILAWNSV 153
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
+S Y R G E + F +Q V PN ++ VLS+C +D Q+ + G
Sbjct: 154 LSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGV-IKMG 212
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM 342
+ G ++D+ + G L +AR++ + +P + +++ ++ L EE
Sbjct: 213 FEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAG---YVQVGLPEEALK 269
Query: 343 KLQEMEPENPTP----FVILSNIYAGLGRWED 370
++M+ P FV + GLGR +D
Sbjct: 270 VFEDMQKLGLVPDQVAFVTVITACVGLGRLDD 301
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 205/382 (53%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT + ++ C YL GR +HG +K S+ + + + MY+KCG + +F
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ + G++ TWN++ISG+SQ G+
Sbjct: 215 DEMP-----------VKGLI-------------------------TWNAVISGYSQNGLA 238
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
++ +L+E+M+S+G+ P + SVLS+CA L A K+G E V + ++ A
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
ISMY +CG + AR FD +K W AMI YG +G E + +FD M + ++P
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVK--SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRP 356
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ A FV VLSAC H+G DK L++F M ++ L+P EH+ C+VDLLGR+GRLDEA E
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P EP +V+ +LLGAC H N D+ E K+ E EP N +V++SNIY+
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQ 476
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E + RIR M+ +R K PG S
Sbjct: 477 EGIWRIRVMMRERAFRKKPGYS 498
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 12/249 (4%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN + + + E+ L+ M +G P +L +CA LS G++ H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + TALISMY KCG + AR+ F++ +NA+ISGY N + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF---GLKPKQEHFGC 292
+F M++ V +S + + ++ C V + L + + GL +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT----VPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN- 351
+ + + G ++ R L E+P + +++++ + + L ++ ++M+
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISG---YSQNGLAYDVLELYEQMKSSGV 253
Query: 352 -PTPFVILS 359
P PF ++S
Sbjct: 254 CPDPFTLVS 262
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 219/379 (57%), Gaps = 8/379 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+++ +V+SACA L +G+ +H + + I T+LV+MY CG + A
Sbjct: 214 EPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLARE 273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
V+ +L S++++ M++G G + A +F+ + + D W++MISG+++
Sbjct: 274 VYDQLP-SKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEK----DLVCWSAMISGYAESY 328
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +MQ +VP + SV+SACA++ AL K H + + + +
Sbjct: 329 QPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINN 388
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG AR F+ K + W++MI+ + +G+ +SA+ +F M+++ +
Sbjct: 389 ALIDMYAKCGNLVKAREVFENMPRK--NVISWSSMINAFAMHGDADSAIALFHRMKEQNI 446
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+ VL AC HAG V++ + F+ M ++ + P++EH+GCMVDL R+ L +A
Sbjct: 447 EPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAM 506
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P P V ++ SL+ AC H +LGE A +L E+EP++ V+LSNIYA
Sbjct: 507 ELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEK 566
Query: 367 RWEDVGRIRQMINDRQLTK 385
RW+DVG +R+++ + ++K
Sbjct: 567 RWDDVGLVRKLMKHKGVSK 585
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 186/376 (49%), Gaps = 13/376 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+F ++ A + L L G ++HGL K +D I +AL+ MY CG + A +F +
Sbjct: 117 SFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDK 176
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ R+++TWN MI G N + ++L+E + G +PD +++S + G
Sbjct: 177 M-SHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSY 235
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ + ++ G TS+++ A+ A+ L +E + + +K ++TA++S
Sbjct: 236 GKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLP----SKHMVVSTAMLS 291
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y K G AR FD+ K D W+AMISGY + + A+++F+ MQ+ ++ P+
Sbjct: 292 GYAKLGMVQDARFIFDRMVEK--DLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQ 349
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ ++V+SAC + G + +A I T D + G ++D+ + G L +ARE+
Sbjct: 350 ITMLSVISACANVGALVQAKWIHTYADKN-GFGRTLPINNALIDMYAKCGNLVKAREVFE 408
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPF-VILSNIYAGLGRW 368
+P V + S++ A H ++D + MK Q +EP T V+ + +AGL
Sbjct: 409 NMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVE- 467
Query: 369 EDVGRIRQMINDRQLT 384
E MIN+ +++
Sbjct: 468 EGQKFFSSMINEHRIS 483
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 111 PDPATW--NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+P T N ++ FS+ L+ ++ G +L A + LSAL LG
Sbjct: 76 PNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGL 135
Query: 169 ETHGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
E HG + + D + +ALI+MY CG+ AR FD+ + D WN MI GY
Sbjct: 136 EIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHR--DVVTWNIMIDGYS 193
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+N Y+ +++++ M+ +P++ VLSAC HAG++ I + D+ G +
Sbjct: 194 QNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDN-GFRVGS 252
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+V++ G + ARE+ +LP + V ++L
Sbjct: 253 HIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLS 291
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 208/397 (52%), Gaps = 53/397 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKI-------EKQSDTMIGTALVDMYLKCG 60
EPN VT S++S CAS+ L +G+Q H +K +K+ D ++ L+DMY KC
Sbjct: 367 EPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCK 426
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A ++F + EG + TW MI
Sbjct: 427 SYRVARSIFDSI----------------------------------EGKDKNVVTWTVMI 452
Query: 121 SGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
G++Q G +A KLF ++ Q T + P+ ++ L ACA L L+LG++ H + +R
Sbjct: 453 GGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALR-- 510
Query: 179 LNKDES----MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
N++ES + LI MY K G AR FD +++ + W ++++GYG +G E
Sbjct: 511 -NENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR--NVVSWTSLMTGYGMHGRGEE 567
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
A+ +FD MQ+ + +F+ VL AC H+G VD+ + F M FG+ P EH+ CMV
Sbjct: 568 ALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMV 627
Query: 295 DLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
DLLGR+GRL+EA ELI+ + EPT V+ +LL A H N +LGE A KL E+ EN
Sbjct: 628 DLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDG 687
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ +LSN+YA RW+DV RIR ++ + K PG S
Sbjct: 688 SYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCS 724
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/358 (32%), Positives = 188/358 (52%), Gaps = 23/358 (6%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P+++T ++++ ACAS+ LQ G+QVHG +++ D +G ALV MY KC +
Sbjct: 228 LKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNE 287
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A+ VF+ +K +++++WN M+ G G + A+ LF+ + E K D TW+++I+G++
Sbjct: 288 ANKVFEGIK-KKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYA 346
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN---- 180
Q G FEA +F +MQ G+ P++ + S+LS CA + AL GK+TH +VI+ LN
Sbjct: 347 QKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWN 406
Query: 181 ---KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D + LI MY KC AR FD E K + W MI GY ++GE A++
Sbjct: 407 DKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALK 466
Query: 238 IFD--LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE----HFG 291
+F Q+ +KPN+ + L AC G + Q+ + L+ + E + G
Sbjct: 467 LFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHA-----YALRNENESEVLYVG 521
Query: 292 -CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
C++D+ +SG +D AR + + V + SL+ H GEE +M+
Sbjct: 522 NCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMH---GRGEEALHLFDQMQ 576
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 140/280 (50%), Gaps = 37/280 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ AC + L+ G VH + S+ I ++V MY +CG L AH +
Sbjct: 125 PDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQM 184
Query: 69 FQEL--KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F E+ + +I++WN+++A + G+S A+ +
Sbjct: 185 FDEVLERKIEDIVSWNSILAAYVQGGQSRTALRI-------------------------- 218
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
AF++ S + P + ++L ACA + AL+ GK+ HG +R L D +
Sbjct: 219 -----AFRMGNHY-SLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVG 272
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+SMY KC + + A + F+ IK D WNAM++GY + G ++SA+ +F +MQ+E
Sbjct: 273 NALVSMYAKCSKMNEANKVFEG--IKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEED 330
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+K + ++ AV++ GH +AL +F M +GL+P
Sbjct: 331 IKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGLEPN 369
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKC 59
K+ S +PN+ T + ACA L L+ GRQ+H L+ E +S+ + +G L+DMY K
Sbjct: 472 FKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKS 531
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G + A VF +K RN+++W +++ G ++GR E+A+ LF+ + GF D T+ +
Sbjct: 532 GDIDAARAVFDNMK-LRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVV 590
Query: 120 ISGFSQLGMRFEAFKLFEKM-QSTGMVP 146
+ S GM + F M + G+ P
Sbjct: 591 LYACSHSGMVDQGMIYFHDMVKGFGITP 618
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 140/330 (42%), Gaps = 55/330 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQ---VHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+ P ++ IS++ C +L+ + Q VHG T M A V Y++CG
Sbjct: 24 FTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFT--------EMFSYA-VGAYIECGA 74
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A ++ Q L S + + W WN++I
Sbjct: 75 SAEAVSLLQRLIPSHSTVFW----------------------------------WNALIR 100
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+LG+ + + +MQ G +P VL AC ++ +L+ G H V L
Sbjct: 101 RSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGS 160
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + ++++MY +CG A + FD+ E K +D WN++++ Y + G+ +A+ I
Sbjct: 161 NVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAF 220
Query: 241 LMQQE---KVKPNSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVD 295
M K++P++ + V +L AC + Q+ F++ + GL +V
Sbjct: 221 RMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRN---GLVDDVFVGNALVS 277
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + +++EA ++ + + V +++++
Sbjct: 278 MYAKCSKMNEANKVFEGIKKKDVVSWNAMV 307
>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g56690, mitochondrial; Flags: Precursor
gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 207/377 (54%), Gaps = 31/377 (8%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
++ + + T ++ Y + + A +F E+ + ++W +M+ G L+GR E A E F
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLF-EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 102 EGLAHE----------GF-----------------KPDPATWNSMISGFSQLGMRFEAFK 134
E + + GF D ATW MI + + G EA
Sbjct: 258 EVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
LF +MQ G+ PS + S+LS CA L++L+ G++ H H++R + D +A+ L++MY+
Sbjct: 318 LFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYV 377
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG+ A+ FD+F K D WN++ISGY +G E A++IF M PN +
Sbjct: 378 KCGELVKAKLVFDRFSSK--DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+A+L+AC +AG +++ L+IF M+ F + P EH+ C VD+LGR+G++D+A ELI +
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+P +V+ +LLGAC H DL E A KL E EP+N +V+LS+I A +W DV
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAV 555
Query: 374 IRQMINDRQLTKLPGIS 390
+R+ + ++K PG S
Sbjct: 556 VRKNMRTNNVSKFPGCS 572
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 141/375 (37%), Gaps = 97/375 (25%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML------------------- 90
LV Y+K + A NVF EL RN+++W M+ G M
Sbjct: 83 NGLVSGYIKNRMIVEARNVF-ELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 91 ------------NGRSEKAMELFE---------------GLAHEGFKPDPA--------- 114
+GR +KA +L++ GL EG + D A
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREG-RVDEARLIFDEMRE 200
Query: 115 ----TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
TW +MI+G+ Q A KLFE M V +++ LG
Sbjct: 201 RNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEV--------------SWTSMLLGYTL 246
Query: 171 HGHVIRADL------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G + A+ K A+I + + G+ S ARR FD E + D A W MI
Sbjct: 247 SGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR--DNATWRGMIK 304
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----DD 279
Y R G A+++F MQ++ V+P+ S +++LS C + Q+ + DD
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
D + ++ + + G L +A+ + + +++S++ H LGEE
Sbjct: 365 DVYVA------SVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASH---GLGEE 415
Query: 340 MAMKLQEMEPENPTP 354
EM P
Sbjct: 416 ALKIFHEMPSSGTMP 430
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 28/280 (10%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
++V Y G A +F E+ RN+++WN +++G + N +A +FE +
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEM-SERNVVSWNGLVSGYIKNRMIVEARNVFELMPER-- 108
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +W +M+ G+ Q GM EA LF +M V T + D + ++
Sbjct: 109 --NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSW----TVMFGGLIDDGRIDKARK 162
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
+ + KD +T +I + G+ AR FD E++ + W MI+GY +N
Sbjct: 163 LYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFD--EMRERNVVTWTTMITGYRQN 216
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
+ A ++F++M ++ S+ ++L +G ++ A + F +M P +
Sbjct: 217 NRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPV 265
Query: 290 FGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
C M+ G G + +AR + + + + + ++ A
Sbjct: 266 IACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKA 305
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 41/278 (14%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G + A F L+ + I +WN++++G NG ++A +LF+ ++ + +WN
Sbjct: 29 RIGKINEARKFFDSLQ-FKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWN 83
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
++SG+ + M EA +FE M +V +A+ G G V A
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVV--------------SWTAMVKGYMQEGMVGEA 129
Query: 178 DL------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ ++E T + + G+ AR+ +D +K D MI G R G
Sbjct: 130 ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--DVVASTNMIGGLCREGR 187
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ A IFD M++ N ++ +++ VD A ++F +M P++
Sbjct: 188 VDEARLIFDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVS 236
Query: 292 CMVDLLGR--SGRLDEARELIRELP-EPTVSVYHSLLG 326
LLG SGR+++A E +P +P ++ ++G
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 105/262 (40%), Gaps = 64/262 (24%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G+ +A + F+ L + +WNS++SG+ G+ EA +LF++M +V
Sbjct: 31 GKINEARKFFDSLQFKAI----GSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS----- 81
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
L+S Y+K AR + FE+
Sbjct: 82 ----------------------------------WNGLVSGYIKNRMIVEAR---NVFEL 104
Query: 212 KPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
P+ + W AM+ GY + G A +F M + N S+ + G +DKA
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKA 160
Query: 271 LQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+++ MM P ++ M+ L R GR+DEAR + E+ E V + +++
Sbjct: 161 RKLYDMM-------PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213
Query: 329 WCHLNSDLGEEMAMKLQEMEPE 350
+ D+ A KL E+ PE
Sbjct: 214 RQNNRVDV----ARKLFEVMPE 231
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + G+ + AR+FFD + K WN+++SGY NG + A ++FD M +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKA--IGSWNSIVSGYFSNGLPKEARQLFDEMSER---- 77
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEAR 307
N S+ ++S + +A +F +M P++ + MV + G + EA
Sbjct: 78 NVVSWNGLVSGYIKNRMIVEARNVFELM-------PERNVVSWTAMVKGYMQEGMVGEAE 130
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L +PE + + G L D + A KL +M P V +N+ GL R
Sbjct: 131 SLFWRMPERNEVSWTVMFGG----LIDDGRIDKARKLYDMMPVKDV--VASTNMIGGLCR 184
Query: 368 WEDVGRIRQMIND 380
V R + ++
Sbjct: 185 EGRVDEARLIFDE 197
>gi|357133503|ref|XP_003568364.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Brachypodium distachyon]
Length = 554
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 213/382 (55%), Gaps = 13/382 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ ++ AC L+ L G+QVHG ++ +S+ ++ +L++MY + G L A VF +
Sbjct: 120 TYPFLLKACGGLMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGM 179
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRF 130
+ R++++WNT+I+ G+ KA +F + PD +W +++SG++ G
Sbjct: 180 Q-ERDVVSWNTVISAHARLGQMRKARAVFNSM------PDKTVVSWTALVSGYTAAGDFS 232
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A + F MQ G P + +VL ACA L AL+LG+ + + R + ++ + AL+
Sbjct: 233 GAVEAFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALV 292
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ-QEKVKP 249
MY KCG A + F+ K D W+ M+ G +G + AV++F M+ Q VKP
Sbjct: 293 EMYAKCGCIDQALQLFNGMAEK--DVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKP 350
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV +LSAC HAG +D+ L F M+D +G++P EH+GC+VDLL RSG++ +L
Sbjct: 351 NGITFVGLLSACSHAGLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLLCRSGQIQRTLDL 410
Query: 310 IRELPEPT-VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I ++P P ++ S+L AC H + D A +L +EPE+ V+L+N+YA RW
Sbjct: 411 ISDMPLPADAKIWGSVLNACRSHGDVDTAVLAAERLVALEPEDVGNLVMLANVYAAARRW 470
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+V R+ I R + K PG S
Sbjct: 471 SEVANTRKAIRSRSMRKTPGCS 492
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 90/153 (58%), Gaps = 6/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ ++V+ ACA L L+ GR ++ + + +T + ALV+MY KCGC+ A
Sbjct: 247 EPDDVSIVAVLPACAQLGALELGRWIYAYCNRHQMLRETYVCNALVEMYAKCGCIDQALQ 306
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
+F + +++++W+TM+ G+ +GR+++A++LF + +G KP+ T+ ++S S
Sbjct: 307 LFNGM-AEKDVISWSTMVGGLAAHGRAQEAVQLFTEMERQGTVKPNGITFVGLLSACSHA 365
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
G+ E F++M G+ P ++ C+ +L
Sbjct: 366 GLLDEGLDYFDRMNDVYGIEPGVEHYGCIVDLL 398
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 107/262 (40%), Gaps = 50/262 (19%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V + L ACA L H H +R L++ +AT ++ + G+ + A R F Q
Sbjct: 16 VMASLRACASFRDLL---RVHAHAVRLSLSQSSYLATQIVHLCNAHGRVAHATRVFSQ-- 70
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP-------NSASFVAVLSACGH 263
++ + NAMI Y +N + A+ ++ M + + P + ++ +L ACG
Sbjct: 71 VREPNLHLHNAMIKAYAQNHRHLDAITVYIRMLRRRPFPWISCTGGDRFTYPFLLKACGG 130
Query: 264 ----------AGHVDKA------------LQIFTMMDDDF-------GLKPKQ-EHFGCM 293
GHV ++ ++++T D G++ + + +
Sbjct: 131 LMALDLGKQVHGHVVRSGCESNAIVQNSLIEMYTRAGDLVLARKVFDGMQERDVVSWNTV 190
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
+ R G++ +AR + +P+ TV + +L+ + G A +L +ME P
Sbjct: 191 ISAHARLGQMRKARAVFNSMPDKTVVSWTALVSG-YTAAGDFSGAVEAFRLMQMEGFEPD 249
Query: 354 PFVILSNIYA-------GLGRW 368
I++ + A LGRW
Sbjct: 250 DVSIVAVLPACAQLGALELGRW 271
>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Glycine max]
Length = 650
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 209/385 (54%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
+P + F + AC+ L GR +H +K + ++D ++ AL+ +Y++ GC
Sbjct: 172 KPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVL 231
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF+E+ RN+++WNT+IAG F+
Sbjct: 232 KVFEEMP-QRNVVSWNTLIAG-----------------------------------FAGQ 255
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G FE F MQ GM S +T++L CA ++AL GKE HG ++++ N D +
Sbjct: 256 GRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLL 315
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L+ MY KCG+ + + FD+ K D WN M++G+ NG+ A+ +FD M +
Sbjct: 316 NSLMDMYAKCGEIGYCEKVFDRMHSK--DLTSWNTMLAGFSINGQIHEALCLFDEMIRYG 373
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++PN +FVA+LS C H+G + ++F+ + DFG++P EH+ C+VD+LGRSG+ DEA
Sbjct: 374 IEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEA 433
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ +P P+ S++ SLL +C + N L E +A +L E+EP NP +V+LSNIYA
Sbjct: 434 LSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVMLSNIYANA 493
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G WEDV R+R+M+ + K G S
Sbjct: 494 GMWEDVKRVREMMALTGMKKDAGCS 518
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 8/218 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK--CVTSVLSACADLSALKLGKETHGH 173
+NS + + G +A +L E + T + + ++ L AC +L+ G++ H H
Sbjct: 36 FNSTLKSLCKWGNLDKALRLIESSKPTPIEEEEEEESISLFLHACISRRSLEHGRKLHLH 95
Query: 174 VIRAD--LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
++R+ + ++ ++ T LI++Y CG+ + ARR F + KP + W AM GY RNG
Sbjct: 96 LLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEKPPEEPVWVAMAIGYSRNGF 155
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEH 289
A+ ++ M VKP + +F L AC + V +A+ ++ D G + Q
Sbjct: 156 SHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHA-QIVKHDVG-EADQVV 213
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++ L G DE ++ E+P+ V +++L+
Sbjct: 214 NNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAG 251
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 142/354 (40%), Gaps = 56/354 (15%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQ--SDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
+ AC S L+ GR++H L+ + + + + T L+ +Y CG + A VFQ
Sbjct: 77 LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ----- 131
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+ P+ W +M G+S+ G EA L
Sbjct: 132 -----------------------------IDDEKPPEEPVWVAMAIGYSRNGFSHEALLL 162
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMATALISMYM 194
+ M S + P + L AC+DL +G+ H +++ D+ + D+ + AL+ +Y+
Sbjct: 163 YRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYV 222
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+ G + F+ E+ + WN +I+G+ G + F +MQ+E + + +
Sbjct: 223 EIGCFDEVLKVFE--EMPQRNVVSWNTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITL 280
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELI 310
+L C + +I + LK ++ ++D+ + G + ++
Sbjct: 281 TTMLPVCAQVTALHSGKEIHGQI-----LKSRKNADVPLLNSLMDMYAKCGEIGYCEKVF 335
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENPTPFVILS 359
+ ++ ++++L +N + E + + EM EP T +LS
Sbjct: 336 DRMHSKDLTSWNTMLAG--FSINGQIHEALCL-FDEMIRYGIEPNGITFVALLS 386
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 207/386 (53%), Gaps = 42/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT SV+S C + L+ GR +HGL++K+ DT + ALV MY KC
Sbjct: 352 KPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIW-DTNVANALVHMYAKC-------- 402
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A + SEK D WNS+ISGFSQ G
Sbjct: 403 -------------YQNRDAKYVFEMESEK---------------DIVAWNSIISGFSQNG 434
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM-- 185
EA LF +M + ++P+ V S+ SACA L +L +G H + ++ S+
Sbjct: 435 SIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHV 494
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL+ Y KCG AR FD E K + W+AMI GYG+ G+ + ++E+F+ M ++
Sbjct: 495 GTALLDFYAKCGDAESARLIFDTIEEK--NTITWSAMIGGYGKQGDTKGSLELFEEMLKK 552
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ KPN ++F +VLSAC H G V++ + F+ M D+ P +H+ CMVD+L R+G L++
Sbjct: 553 QQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 612
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I ++P +P V + + L C H DLGE + K+ ++ P++ + +V++SN+YA
Sbjct: 613 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 672
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW +R ++ R L+K+ G S
Sbjct: 673 DGRWSQAKEVRNLMKQRGLSKIAGHS 698
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 52/358 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T+ +++ AC L L G+ HG +K + + + T+L+DMY+KCG + A VF
Sbjct: 253 NEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVF 312
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E H D W +MI G++ G
Sbjct: 313 NE----------------------------------HS--HVDLVMWTAMIVGYTHNGSV 336
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF+KM G+ P+ + SVLS C + L+LG+ HG I+ + D ++A AL
Sbjct: 337 NEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANAL 395
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC Q A+ F+ K D WN++ISG+ +NG A+ +F M E V P
Sbjct: 396 VHMYAKCYQNRDAKYVFEMESEK--DIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMP 453
Query: 250 NSASFVAVLSACGHAGH--VDKALQIFTMMDDDFG-LKPKQEHFG-CMVDLLGRSGRLDE 305
N + ++ SAC G + +L +++ G L H G ++D + G +
Sbjct: 454 NGVTVASLFSACASLGSLAIGSSLHAYSV---KLGFLASSSVHVGTALLDFYAKCGDAES 510
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILS 359
AR + + E + +++G ++ +L EEM K Q +P T +LS
Sbjct: 511 ARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQ--KPNESTFTSVLS 566
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 125/259 (48%), Gaps = 39/259 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ + F + AC + L G+++H +K+ D ++ T L+DMY KCG + ++ VF
Sbjct: 153 DDIVFSKALKACTEVQDLDNGKKIHCQIVKV-PSFDNVVLTGLLDMYAKCGEIKSSYKVF 211
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ RN++ W +MIAG + N +L+E
Sbjct: 212 EDIT-LRNVVCWTSMIAGYVKN-------DLYE--------------------------- 236
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF +M+ ++ + +++ AC L AL GK HG +I++ + + T+L
Sbjct: 237 -EGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSL 295
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY+KCG S ARR F+ E D W AMI GY NG A+ +F M +KP
Sbjct: 296 LDMYVKCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKP 353
Query: 250 NSASFVAVLSACGHAGHVD 268
N + +VLS CG G+++
Sbjct: 354 NCVTIASVLSGCGLVGNLE 372
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 142/355 (40%), Gaps = 55/355 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++S C ++ L RQ HG+ D I T LV +Y G A VF ++
Sbjct: 62 LLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIP--- 115
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+PD W ++ + FE K +
Sbjct: 116 ---------------------------------EPDFYLWKVILRCYCLNNESFEVIKFY 142
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+ + G + L AC ++ L GK+ H +++ + D + T L+ MY KC
Sbjct: 143 DLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP-SFDNVVLTGLLDMYAKC 201
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G+ + + F+ ++ + W +MI+GY +N YE + +F+ M++ V N ++
Sbjct: 202 GEIKSSYKVFEDITLR--NVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGT 259
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV----DLLGRSGRLDEARELIRE 312
++ AC + + + +K E C+V D+ + G + AR + E
Sbjct: 260 LVMACTKLRALHQGKWFHGCL-----IKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 314
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILSNIYAGLG 366
+ ++ +++ + H N + E +++ Q+M P V ++++ +G G
Sbjct: 315 HSHVDLVMWTAMIVG-YTH-NGSVNEALSL-FQKMSGVGIKPNCVTIASVLSGCG 366
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 226/449 (50%), Gaps = 70/449 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T S + ACA + + GRQ+H +K++ SD+ +G L+DMY KC + A V
Sbjct: 210 PNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLV 269
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-----EGLA------------------ 105
F+ L R+++ WN +I+G N E+A LF EG+
Sbjct: 270 FK-LMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQA 328
Query: 106 ------------HEGFKPDPATWNSMISGFSQLGMRFEAFKLFE---------------- 137
GF+ D NS+I + + G +A ++FE
Sbjct: 329 NYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIVDLVLFTSLVTA 388
Query: 138 ---------------KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+MQ G+ P +S+L+ACA LSA + GK+ H H+++ D
Sbjct: 389 YAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSD 448
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L++MY KCG A F + ++ W+AMI G ++G + A+++F M
Sbjct: 449 IFAGNSLVNMYAKCGSIEDASCAFSRIPVR--GIVSWSAMIGGLAQHGYGKEALQLFKQM 506
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ V PN + V+VL AC HAG V +A F M FG++P QEH+ CM+DLLGR+G+
Sbjct: 507 LKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGK 566
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L+ A EL+ ++P + V+ +LLGA H N DLGE+ A L +EPE V+L+NI
Sbjct: 567 LEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALEPEKSGTHVLLANI 626
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA +G W+ V R+R+++ D ++ K PG+S
Sbjct: 627 YASVGMWDKVARVRRLMKDGKVKKEPGMS 655
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 162/369 (43%), Gaps = 52/369 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + S+I+ C L GR++HG +K+ SD ALVDMY K G L A +
Sbjct: 108 RPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASS 167
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ KPD +WN++I+G
Sbjct: 168 VFDEIA------------------------------------KPDIVSWNAIIAGCVLHE 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +L +M +GM P++ ++S L ACA ++ +LG++ H +I+ D+ D +
Sbjct: 192 YHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGV 251
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
LI MY KC AR F++ P+ D WNA+ISG+ +N E E A +F LM E
Sbjct: 252 GLIDMYSKCNSMDDARLV---FKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 247 VKPNSASFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ N + VL + A ++ + + ++ G + ++D G+ G ++
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKS---GFEFDNYVVNSLIDTYGKCGHVE 365
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE--NPTPFVI--LSN 360
+A + E P + ++ SL+ A + GEE EM+ P FV L N
Sbjct: 366 DATRVFEESPIVDLVLFTSLVTA---YAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422
Query: 361 IYAGLGRWE 369
A L +E
Sbjct: 423 ACASLSAYE 431
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 147/345 (42%), Gaps = 50/345 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N F SV+ AC L G+QVHG+ + SD + +LV +Y KCG A ++F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGFSQLG 127
+ PD + +WN++ S +
Sbjct: 69 DAI--------------------------------------PDRSVVSWNALFSCYVHSD 90
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M EA LF M +G+ P+ ++S+++ C L G++ HG++I+ + D A
Sbjct: 91 MHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSAN 150
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY K G A FD EI D WNA+I+G + + A+E+ M + +
Sbjct: 151 ALVDMYAKVGILEDASSVFD--EIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGM 208
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDE 305
PN + + L AC + Q+ +++ D G G ++D+ + +D+
Sbjct: 209 CPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMG---SDSFLGVGLIDMYSKCNSMDD 265
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
AR + + +PE + +++++ H ++ EE A M E
Sbjct: 266 ARLVFKLMPERDMIAWNAVISG---HSQNEEDEEAASLFPLMHTE 307
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 10/217 (4%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
SVL AC L LGK+ HG V+ + DE +A +L+ +Y KCG AR FD
Sbjct: 15 SVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAI--- 71
Query: 213 PDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
PD WNA+ S Y + + AV +F M ++PN S ++++ C +
Sbjct: 72 PDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGR 131
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+I + G +VD+ + G L++A + E+ +P + +++++ C H
Sbjct: 132 KIHGYL-IKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLH 190
Query: 332 LNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYAGLG 366
E+ L+EM P F + S + A G
Sbjct: 191 EYHHRALEL---LREMNKSGMCPNMFTLSSALKACAG 224
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S S+++ACASL + G+QVH LK SD G +LV+MY KCG + A
Sbjct: 411 KPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASC 470
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + R I++W+ MI G+ +G ++A++LF+ + G P+ T S++ + G
Sbjct: 471 AFSRIP-VRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAG 529
Query: 128 MRFEAFKLFEKMQ 140
+ EA F M+
Sbjct: 530 LVAEAKHYFNSMK 542
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 208/376 (55%), Gaps = 38/376 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
S + AC +L +FGR VH +K+ +SD +G AL DMY K G + A NVF
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 271
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN++++ +I G + + EK + +F L +G +P+ T+
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTF------------------- 312
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+S++ ACA+ +AL+ G + H V++ + ++D +++ L+ MY K
Sbjct: 313 ----------------SSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A + FD EI WN+++S +G++G + A++ F+ M VKPN+ +F+
Sbjct: 357 CGLLEHAIQAFD--EIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFI 414
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
++L+ C HAG V++ L F MD +G+ P +EH+ C++DLLGR+GRL EA+E I +P
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
EP + S LGAC H + ++G+ A KL ++EP+N V+LSNIYA +WEDV +
Sbjct: 475 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 534
Query: 375 RQMINDRQLTKLPGIS 390
R + D + KLPG S
Sbjct: 535 RMRMRDGNVKKLPGYS 550
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 74/389 (19%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
VI A L+ G+Q+H L + T + LV+MY KCG L
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGEL-------------- 56
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+ A++LF+ + +W +MISG SQ EA + F
Sbjct: 57 ------------------DHALKLFDTMPQRNL----VSWTAMISGLSQNSKFSEAIRTF 94
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M+ G VP+ +S + ACA L ++++GK+ H ++ + + + + L MY KC
Sbjct: 95 CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A + F++ K D W AMI GY + GE+E A+ F M E+V + +
Sbjct: 155 GAMFDACKVFEEMPCK--DEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCS 212
Query: 257 VLSACG-----------HAGHVDKALQ--IFT---------------MMDDDFGLKPKQE 288
L ACG H+ V + IF + FG+ +
Sbjct: 213 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 289 H---FGCMVDLLGRSGRLDEAR----ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ + C++D + ++++ EL R+ EP + SL+ AC + G ++
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 342 MKLQEME-PENPTPFVILSNIYAGLGRWE 369
++ ++ E+P IL ++Y G E
Sbjct: 333 AQVMKINFDEDPFVSSILVDMYGKCGLLE 361
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF S+I ACA+ L+ G Q+H +KI D + + LVDMY KCG L A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ G + WN++++ +G + A++ FE + G KP+ T+ S+++G S G
Sbjct: 366 AFDEI-GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAG 424
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKE 169
+ E F M T G+VP + + V+ LK KE
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
M+ + V+ A L+ GK+ H +I A + L++MY KCG+ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
+ FD + + W AMISG +N ++ A+ F M+ P +F + + AC
Sbjct: 61 KLFDTMPQR--NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
G ++ Q+ + FG+ + + D+ + G + +A ++ E+P
Sbjct: 119 LGSIEMGKQMHCLA-LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 229/449 (51%), Gaps = 70/449 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ ++ C + G Q+H L++K +SD + L+DMY K G L A V
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE------------GLAH---------- 106
+ LK +++++W +MIAG + + + A+ F+ GLA
Sbjct: 403 LEMLK-EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 107 -------------EGFKPDPATWNSM-------------------------------ISG 122
G+ D + WN++ +SG
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+Q G+ EA K+F +M +G+ ++ S LSA A+L+ +K GK+ H VI+ + +
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE 581
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ ALIS+Y KCG A+ F E+ + WN +I+ ++G A+++FD M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFS--EMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++E +KPN +F+ VL+AC H G V++ L F M D++G++P+ +H+ C++D+ GR+G+
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQ 699
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LD A++ I E+P V+ +LL AC H N ++GE A L E+EP + +V+LSN
Sbjct: 700 LDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNA 759
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA +W + ++R+M+ DR + K PG S
Sbjct: 760 YAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 39/323 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV+S+C GR +H K S+ +G A++ +YL+CG A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D T+N++ISG +Q G
Sbjct: 201 FCDMP------------------------------------HRDTVTFNTLISGHAQCGH 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++FE+MQ +G+ P ++S+L+ACA L L+ G + H ++ +A ++ D M +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KCG A F+ + + WN M+ +G+ + + E+F MQ ++
Sbjct: 285 LLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C +D QI + + G + G ++D+ + G L++AR
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHS-LSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 309 LIRELPEPTVSVYHSLLGACWCH 331
++ L E V + S++ H
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQH 424
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 160/382 (41%), Gaps = 75/382 (19%)
Query: 47 MIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
++G L+D+Y K G + A VF+EL N+
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNV---------------------------- 109
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+W +M+SG++Q G+ EA L+ +M G+VP+ ++SVLS+C
Sbjct: 110 --------SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H + + + A+I++Y++CG A R F ++ D +N +ISG+
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGH 219
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G E A+EIF+ MQ + P+ + ++L+AC G + K Q+ + + G+
Sbjct: 220 AQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSD 278
Query: 287 QEHFGCMVDLLGRSGRLDEAREL---------------------IRELPE---------- 315
G ++DL + G ++ A + I +L +
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 316 ----PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFVILSNIYAGLGRWED 370
P Y +L C C DLGE++ ++ ++ + +L ++Y+ G E
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 371 VGRIRQMINDRQLTKLPGISAG 392
R+ +M+ ++ + + AG
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAG 420
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E H + L K + LI +Y K G ARR F+ E+ D W AM+SGY +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGYAQ 120
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG E A+ ++ M + V P +VLS+C A + ++ G +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
++ L R G A + ++P +++L+ H GE +EM+
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG---HAQCGHGEHALEIFEEMQ 236
Query: 349 PENPTP-FVILSNIYAGLGRWEDVGRIRQM 377
+P V +S++ A D+ + Q+
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 206/384 (53%), Gaps = 44/384 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ SV+ AC L L RQ+H +KI SD + +AL+D+Y + G L A
Sbjct: 63 RPNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALR 119
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E M+ G D W+S+I+GF+Q
Sbjct: 120 VFDE------------MVTG------------------------DLVVWSSIIAGFAQNS 143
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF++M+ G + +TSVL AC L+ L+LG++ H HV++ D +D +
Sbjct: 144 DGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNN 201
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A F + D W+ MI+G +NG + A+++F+ M+ +
Sbjct: 202 ALLDMYCKCGSLEDANAVF--VRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGI 259
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN + V VL AC HAG V++ L F M + FG+ P +EH+GCM+DLLGR+GRL EA
Sbjct: 260 KPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGIDPGREHYGCMIDLLGRAGRLSEAV 319
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI E+ EP + +LL AC H N D+ A ++ ++P++ +V+LSNIYA
Sbjct: 320 DLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQILRLDPQDAGTYVLLSNIYANTQ 379
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW DV +R+ + +R + K PG S
Sbjct: 380 RWNDVAEVRRTMTNRGIKKEPGCS 403
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 48/278 (17%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
L++MY+K G L A +VF ++ RN+++W T
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMP-DRNVVSWTT---------------------------- 36
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
MIS +S + +A + M G+ P++ +SVL AC L L ++ H
Sbjct: 37 -------MISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGLFNL---RQLH 86
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+I+ L+ D + +ALI +Y + G+ A R FD E+ D W+++I+G+ +N +
Sbjct: 87 CCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFD--EMVTGDLVVWSSIIAGFAQNSD 144
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF- 290
+ A+ +F M++ + +VL AC ++ Q+ + LK Q+
Sbjct: 145 GDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALLELGRQVHVHV-----LKYDQDLIL 199
Query: 291 -GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++D+ + G L++A + + E V + +++
Sbjct: 200 NNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIAG 237
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 206/385 (53%), Gaps = 39/385 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ TF+ VI+AC+ + L+ G+Q+HG +LK + TALVDMY KCG L A
Sbjct: 311 NKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDAR 370
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F LK +PD W SMISG++Q
Sbjct: 371 KGFDYLK------------------------------------EPDIVLWTSMISGYAQN 394
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G A L+ +MQ ++P + SVL AC+ L+AL+ GK+ H I+ + + +
Sbjct: 395 GENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIG 454
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+AL +MY KCG F + + D WNAMISG +NGE A+E+F+ ++
Sbjct: 455 SALSTMYAKCGSLEDGNLVFRR--MPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGT 512
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP+ +FV VLSAC H G V++ F MM D+FG+ P+ EH+ CMVD+L R+G+L E
Sbjct: 513 TKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKLHET 572
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+E I + + ++ LLGAC + N +LG KL E+ + + +++LS+IY L
Sbjct: 573 KEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTAL 632
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR +DV R+R+++ R + K PG S
Sbjct: 633 GRSDDVERVRRLMKLRGVNKEPGCS 657
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 148/312 (47%), Gaps = 39/312 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ SV+SA + +G+Q+H L LK S +G ALV MY KCGCL A F EL
Sbjct: 217 YTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTF-ELS 275
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
G + D TW++MI+G++Q G EA
Sbjct: 276 GDK-----------------------------------DDITWSAMITGYAQAGDSHEAL 300
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF M G PS V++AC+D+ AL+ GK+ HG+ ++A TAL+ MY
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 360
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR+ FD +K D W +MISGY +NGE E+A+ ++ MQ E++ P+ +
Sbjct: 361 AKCGSLVDARKGFDY--LKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELT 418
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+VL AC +++ QI +G + + + + G L++ + R +
Sbjct: 419 MASVLRACSSLAALEQGKQIHA-QTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRM 477
Query: 314 PEPTVSVYHSLL 325
P + +++++
Sbjct: 478 PSRDIMTWNAMI 489
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 125/300 (41%), Gaps = 41/300 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +F+ ++ C LQ G+ +H L+ S + +LV++Y KCG + A V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + D +WN +I+G+SQ G
Sbjct: 68 FESIT------------------------------------NKDVVSWNCLINGYSQKGT 91
Query: 129 RFEAF--KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+F +LF++M++ +P+ + V +A + G + H I+ D +
Sbjct: 92 VGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVFVG 151
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++LI+MY K G AR+ FD I + W +ISGY A E+F LM++E+
Sbjct: 152 SSLINMYCKIGCMLDARKVFDT--IPERNTVSWATIISGYAMERMAFEAWELFXLMRREE 209
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ + +VLSA V QI + + GL +V + G+ G LD+A
Sbjct: 210 GAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN-GLLSIASVGNALVTMYGKCGCLDDA 268
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 17/188 (9%)
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
P + +L C L+ GK H ++R + +L+++Y KCG A+
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGE--YESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F+ I D WN +I+GY + G Y +E+F M+ E PN +F V +A
Sbjct: 68 FES--ITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHF------GCMVDLLGRSGRLDEARELIRELPEPT 317
+ LQ L K +F ++++ + G + +AR++ +PE
Sbjct: 126 SPETFGGLQA-------HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERN 178
Query: 318 VSVYHSLL 325
+ +++
Sbjct: 179 TVSWATII 186
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L +G ++HG +K D +G+ALVDMY KCG L A
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ L+ + +WNS+ISGFS
Sbjct: 498 IHARLEEKTTV------------------------------------SWNSIISGFSSQK 521
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + F +M G++P +VL CA+++ ++LGK+ H +++ L+ D +A+
Sbjct: 522 QSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAS 581
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG +R F++ + D W+AMI Y +G E A+ +F+ MQ V
Sbjct: 582 TLVDMYSKCGNMQDSRLMFEKAPKR--DYVTWSAMICAYAYHGLGEKAINLFEEMQLLNV 639
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN F++VL AC H G+VDK L F M +GL P+ EH+ CMVDLLGRSG+++EA
Sbjct: 640 KPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEAL 699
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI +P E ++ +LL C N ++ E+ L +++P++ + +V+L+N+YA +G
Sbjct: 700 KLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVG 759
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V ++R ++ + +L K PG S
Sbjct: 760 MWGEVAKMRSIMKNCKLKKEPGCS 783
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 144/319 (45%), Gaps = 47/319 (14%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF ++ AC+ + G QVH L +++ ++D + G+ALVDMY KC L A VF+E+
Sbjct: 140 TFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREM 199
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN++ W+ ++I+G+ Q E
Sbjct: 200 P-ERNLVCWS-----------------------------------AVIAGYVQNDRFIEG 223
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
KLF+ M GM S SV +CA LSA KLG + HGH +++D D + TA + M
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 193 YMKCGQPSWARRFFDQ---FEIKPDDP-AFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
Y KC R FD F P+ P +NA+I GY R + A++IF +Q+ +
Sbjct: 284 YAKC------ERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLG 337
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S L+AC + +Q+ + GL ++D+ G+ G L EA
Sbjct: 338 FDEISLSGALTACSVIKRHLEGIQLHGLA-VKCGLGFNICVANTILDMYGKCGALMEACL 396
Query: 309 LIRELPEPTVSVYHSLLGA 327
+ E+ +++++ A
Sbjct: 397 IFEEMERRDAVSWNAIIAA 415
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 149/347 (42%), Gaps = 46/347 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ ++AC+ + G Q+HGL +K + + ++DMY KCG L A +F
Sbjct: 339 DEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIF 398
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E++ + D +WN++I+ Q
Sbjct: 399 EEME------------------------------------RRDAVSWNAIIAAHEQNEEI 422
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ LF M + M P SV+ ACA AL G E HG +I++ + D + +AL
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSAL 482
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A + + E K WN++ISG+ + E+A F M + + P
Sbjct: 483 VDMYGKCGMLMEAEKIHARLEEKT--TVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAR 307
++ ++ VL C + ++ QI + L+ + + +VD+ + G + ++R
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQI---LKLQLHSDVYIASTLVDMYSKCGNMQDSR 597
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + P+ + +++ A H LGE+ +EM+ N P
Sbjct: 598 LMFEKAPKRDYVTWSAMICAYAYH---GLGEKAINLFEEMQLLNVKP 641
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 48/376 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ SV +CA L + G Q+HG LK + D++IGTA +DMY KC + A VF L
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTL 300
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
P ++N++I G+++ +A
Sbjct: 301 PN------------------------------------PPRQSYNAIIVGYARQDQGLKA 324
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+F+ +Q + ++ L+AC+ + G + HG ++ L + +A ++ M
Sbjct: 325 LDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDM 384
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A F++ E + D WNA+I+ + +N E + +F M + ++P+
Sbjct: 385 YGKCGALMEACLIFEEMERR--DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDF 442
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAREL 309
++ +V+ AC ++ +I ++ GL + F +VD+ G+ G L EA ++
Sbjct: 443 TYGSVVKACAGQQALNYGTEIHGRIIKSGMGL----DWFVGSALVDMYGKCGMLMEAEKI 498
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME--PENPTPFVILSNIYAGLGR 367
L E T ++S++ S+ + ++ EM P+N T +L ++ A +
Sbjct: 499 HARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVL-DVCANMAT 557
Query: 368 WEDVGRIRQMINDRQL 383
E +I I QL
Sbjct: 558 IELGKQIHAQILKLQL 573
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 141/315 (44%), Gaps = 10/315 (3%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+TF ++ C++L L G+QVH + + L+ Y K + A VF
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ R++++WNT+I G G A LF+ + D +WNS++S + G+ +
Sbjct: 67 MP-QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPER----DVVSWNSLLSCYLHNGVNRK 121
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ ++F +M+S + +L AC+ + LG + H I+ D +AL+
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KC + A R F E+ + W+A+I+GY +N + +++F M + + +
Sbjct: 182 MYSKCKKLDDAFRVFR--EMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQ 239
Query: 252 ASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+++ +V +C Q+ + DF +D+ + R+ +A ++
Sbjct: 240 STYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCERMFDAWKVF 297
Query: 311 RELPEPTVSVYHSLL 325
LP P Y++++
Sbjct: 298 NTLPNPPRQSYNAII 312
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 229/449 (51%), Gaps = 70/449 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ ++ C + G Q+H L++K +SD + L+DMY K G L A V
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE------------GLAH---------- 106
+ LK +++++W +MIAG + + + A+ F+ GLA
Sbjct: 403 LEMLK-EKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINA 461
Query: 107 -------------EGFKPDPATWNSM-------------------------------ISG 122
G+ D + WN++ +SG
Sbjct: 462 MRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSG 521
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+Q G+ EA K+F +M +G+ ++ S LSA A+L+ +K GK+ H VI+ + +
Sbjct: 522 FAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFE 581
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ ALIS+Y KCG A+ F E+ + WN +I+ ++G A+++FD M
Sbjct: 582 TEVGNALISLYGKCGSFEDAKMEFS--EMSERNEVSWNTIITSCSQHGRGLEALDLFDQM 639
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++E +KPN +F+ VL+AC H G V++ L F M D++G++P+ +H+ C++D+ GR+G+
Sbjct: 640 KKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQ 699
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LD A++ I E+P V+ +LL AC H N ++GE A L E+EP + +V+LSN
Sbjct: 700 LDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNA 759
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA +W + ++R+M+ DR + K PG S
Sbjct: 760 YAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 39/323 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV+S+C GR +H K S+ +G A++ +YL+CG A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D T+N++ISG +Q G
Sbjct: 201 FCDMP------------------------------------HRDTVTFNTLISGHAQCGH 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++FE+MQ +G+ P ++S+L+ACA L L+ G + H ++ +A ++ D M +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KCG A F+ + + WN M+ +G+ + + E+F MQ ++
Sbjct: 285 LLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C +D QI + + G + G ++D+ + G L++AR
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHS-LSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 309 LIRELPEPTVSVYHSLLGACWCH 331
++ L E V + S++ H
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQH 424
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 160/382 (41%), Gaps = 75/382 (19%)
Query: 47 MIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
++G L+D+Y K G + A VF+EL N+
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNV---------------------------- 109
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+W +M+SG++Q G+ EA L+ +M G+VP+ ++SVLS+C
Sbjct: 110 --------SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H + + + A+I++Y++CG A R F ++ D +N +ISG+
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGH 219
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G E A+EIF+ MQ + P+ + ++L+AC G + K Q+ + + G+
Sbjct: 220 AQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSD 278
Query: 287 QEHFGCMVDLLGRSGRLDEAREL---------------------IRELPE---------- 315
G ++DL + G ++ A + I +L +
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 316 ----PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFVILSNIYAGLGRWED 370
P Y +L C C DLGE++ ++ ++ + +L ++Y+ G E
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 371 VGRIRQMINDRQLTKLPGISAG 392
R+ +M+ ++ + + AG
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAG 420
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E H + L K + LI +Y K G ARR F+ E+ D W AM+SGY +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGYAQ 120
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG E A+ ++ M + V P +VLS+C A + ++ G +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
++ L R G A + ++P +++L+ H GE +EM+
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG---HAQCGHGEHALEIFEEMQ 236
Query: 349 PENPTP-FVILSNIYAGLGRWEDVGRIRQM 377
+P V +S++ A D+ + Q+
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/347 (36%), Positives = 206/347 (59%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + +++ Y G + A +F E+ RN+++WN+M++G + G E+A LF +
Sbjct: 96 DVISWNTIINGYAIVGKIDEAKRLFDEMP-ERNLVSWNSMLSGFVKCGNVEEAFGLFSEM 154
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
D +WNSM++ ++Q G EA LF++M++ G+ P+ V S+LSACA L AL
Sbjct: 155 PCR----DVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGAL 210
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G H ++ + + + TAL+ MY KCG+ S A + F+ E K D WN +I+
Sbjct: 211 DKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESK--DVLAWNTIIA 268
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +G + A ++F M++ V+PN +FVA+LSAC HAG VD+ ++ M +G++
Sbjct: 269 GMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIE 328
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
PK EH+ C++DLL R+G L+EA ELI +P EP S +LLG C H N +LGE + +
Sbjct: 329 PKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKR 388
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L ++P + +++LSNIYA +W+D ++R ++ ++K+PG+S
Sbjct: 389 LINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVS 435
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 91/153 (59%), Gaps = 5/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P T +S++SACA L L G +H + ++++GTALVDMY KCG + A
Sbjct: 191 KPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQ 250
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ S+++L WNT+IAGM ++G ++A +LF+ + +P+ T+ +M+S S G
Sbjct: 251 VFNAME-SKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAMLSACSHAG 309
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLS 156
M E KL + M S+ G+ P ++ CV +L+
Sbjct: 310 MVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLA 342
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 102/235 (43%), Gaps = 20/235 (8%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
V+ AC + S G H HV+++ D + +LI +Y A++ F +
Sbjct: 6 VIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLCSDR- 64
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WNAMI GY + GE +FD M V + S+ +++ G +D+A ++
Sbjct: 65 -DVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEAKRL 119
Query: 274 FTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
F M P++ + M+ + G ++EA L E+P V ++S+L AC+
Sbjct: 120 FDEM-------PERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSML-ACYAQ 171
Query: 332 L---NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
N L M+ ++P T +LS A LG + + IND ++
Sbjct: 172 CGKPNEALALFDQMRAVGVKPTEATVVSLLSAC-AHLGALDKGLHLHTYINDNRI 225
>gi|413946997|gb|AFW79646.1| hypothetical protein ZEAMMB73_771020 [Zea mays]
Length = 505
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 206/349 (59%), Gaps = 8/349 (2%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD + ++LV +Y CG + A +VF E+ R+++ WN MIAG + G A ELF+
Sbjct: 111 SDAHVSSSLVQLYCTCGHVADARSVFDEM-AVRDVVAWNVMIAGYVKAGDQAHARELFDA 169
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ + +W ++I G++Q+ +A ++F +MQ G+ + SVL+AC DL A
Sbjct: 170 MPER----NVVSWTTVIGGYAQMKRPEKAVEVFRRMQVEGIEADGVALLSVLAACGDLGA 225
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+ LG+ H V+R L ++ + ++I MYMKCG A F+ E K W +I
Sbjct: 226 VDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK--SVVTWTTLI 283
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+G+ +G AVE+F M++E + PN+ +F+A+LSAC H G D F +M + +
Sbjct: 284 AGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRI 343
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAM 342
KP+ EH+GCMVDLLGR+G L EA++L++ +P + +++ +LL A H ++ LGE+ +
Sbjct: 344 KPRVEHYGCMVDLLGRAGCLKEAQDLVKNMPLKANAAIWGALLAAARTHGDAGLGEQALL 403
Query: 343 KLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
L E+EP N +++LSNI+A RW DV ++R+ + +R L +PG S+
Sbjct: 404 HLIELEPNNSGNYILLSNIFAEQERWGDVSKLRKAMRERGLRNVPGASS 452
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 71/121 (58%), Gaps = 1/121 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V +SV++AC L + G VH ++ + + +++DMY+KCGC+ A
Sbjct: 207 EADGVALLSVLAACGDLGAVDLGEWVHRFVVRRGLCQEIPLMNSIIDMYMKCGCIEKAVE 266
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ ++++TW T+IAG L+G +A+E+F + E P+ T+ +++S S +G
Sbjct: 267 VFEGME-EKSVVTWTTLIAGFALHGLGLQAVEMFCRMERENMAPNAVTFLAILSACSHVG 325
Query: 128 M 128
+
Sbjct: 326 L 326
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTL---KIEKQSDTMIGTALVDMYLKCGCLPCA 65
PN+VTF++++SAC+ + GR + + +I+ + + +VD+ + GCL A
Sbjct: 309 PNAVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPRVEHY--GCMVDLLGRAGCLKEA 366
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNG 92
++ + + N W ++A +G
Sbjct: 367 QDLVKNMPLKANAAIWGALLAAARTHG 393
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 205/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L +G ++HG +K D +G+ALVDMY KCG L A
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEK 497
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ L+ + +WNS+ISGFS
Sbjct: 498 IHDRLEEKTTV------------------------------------SWNSIISGFSSQK 521
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + F +M G++P +VL CA+++ ++LGK+ H +++ +L+ D +A+
Sbjct: 522 QSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIAS 581
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG +R F++ D W+AMI Y +G E A+++F+ MQ V
Sbjct: 582 TLVDMYSKCGNMQDSRLMFEK--TPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNV 639
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN F++VL AC H G+VDK L F +M +GL P EH+ CMVDLLGRS +++EA
Sbjct: 640 KPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEAL 699
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI + E ++ +LL C N ++ E+ L +++P++ + +V+L+N+YA +G
Sbjct: 700 KLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVG 759
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V +IR ++ + +L K PG S
Sbjct: 760 MWGEVAKIRSIMKNCKLKKEPGCS 783
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 147/316 (46%), Gaps = 41/316 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ AC+ + G QVH L +++ ++D + G+ALVDMY KC L A +F+E+
Sbjct: 140 TFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREM 199
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN++ W+ ++I+G+ Q E
Sbjct: 200 P-ERNLVCWS-----------------------------------AVIAGYVQNDRFIEG 223
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
KLF+ M GM S SV +CA LSA KLG + HGH +++D D + TA + M
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + S A + F+ P +NA+I GY R + A+EIF +Q+ + +
Sbjct: 284 YAKCDRMSDAWKVFNTLPNPPRQS--YNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEI 341
Query: 253 SFVAVLSACGH-AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
S L+AC GH++ +Q+ + GL ++D+ G+ G L EA +
Sbjct: 342 SLSGALTACSVIKGHLE-GIQLHGLA-VKCGLGFNICVANTILDMYGKCGALVEACTIFD 399
Query: 312 ELPEPTVSVYHSLLGA 327
++ +++++ A
Sbjct: 400 DMERRDAVSWNAIIAA 415
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ SV +CA L + G Q+HG LK + D++IGTA +DMY KC + A VF L
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTL 300
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
P ++N++I G+++ +A
Sbjct: 301 P------------------------------------NPPRQSYNAIIVGYARQDQGLKA 324
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
++F+ +Q T + ++ L+AC+ + G + HG ++ L + +A ++ M
Sbjct: 325 LEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDM 384
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A FD E + D WNA+I+ + +N E + +F M + ++P+
Sbjct: 385 YGKCGALVEACTIFDDMERR--DAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDF 442
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEAREL 309
++ +V+ AC ++ ++I ++ GL + F +VD+ G+ G L EA ++
Sbjct: 443 TYGSVVKACAGQQALNYGMEIHGRIVKSGMGL----DWFVGSALVDMYGKCGMLMEAEKI 498
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME--PENPTPFVIL 358
L E T ++S++ S+ + ++ EM P+N T +L
Sbjct: 499 HDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 42/345 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++ ++AC+ + G Q+HGL +K + + ++DMY KCG L A +F
Sbjct: 339 DEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIF 398
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ + D +WN++I+ Q
Sbjct: 399 DDME------------------------------------RRDAVSWNAIIAAHEQNEEI 422
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ LF M + M P SV+ ACA AL G E HG ++++ + D + +AL
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSAL 482
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A + D+ E K WN++ISG+ + E+A F M + V P
Sbjct: 483 VDMYGKCGMLMEAEKIHDRLEEKT--TVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ ++ VL C + ++ QI + L +VD+ + G + ++R +
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQI-LKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ P+ + +++ A H + GE+ +EM+ N P
Sbjct: 600 FEKTPKRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQLLNVKP 641
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 140/314 (44%), Gaps = 10/314 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF ++ C++L L G+Q H + + LV Y K + A VF +
Sbjct: 8 TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R++++WNTMI G G A LF+ + D +WNS++S + G+ ++
Sbjct: 68 P-HRDVISWNTMIFGYAEIGNMGFAQSLFDTMPER----DVVSWNSLLSCYLHNGVNRKS 122
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
++F +M+S + + VL AC+ + LG + H I+ D +AL+ M
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + A R F E+ + W+A+I+GY +N + +++F M + + + +
Sbjct: 183 YSKCKKLDGAFRIFR--EMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQS 240
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
++ +V +C Q+ + DF +D+ + R+ +A ++
Sbjct: 241 TYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIG--TATLDMYAKCDRMSDAWKVFN 298
Query: 312 ELPEPTVSVYHSLL 325
LP P Y++++
Sbjct: 299 TLPNPPRQSYNAII 312
>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01030, mitochondrial; Flags: Precursor
gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 219/412 (53%), Gaps = 39/412 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ + S++ A A +L+ G+ +HG L+ + D + T L+DMY+K G LP A
Sbjct: 222 KPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARM 281
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++NI+ WN++++G+ + A L + EG KPD TWNS+ SG++ LG
Sbjct: 282 VF-DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLG 340
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------------------------- 160
+A + KM+ G+ P++ T++ S C+
Sbjct: 341 KPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMS 400
Query: 161 --------LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
LS L GKE HG +R +L D +ATAL+ MY K G A F + IK
Sbjct: 401 TLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF--WGIK 458
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
A WN M+ GY G E + F +M + ++P++ +F +VLS C ++G V + +
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
F +M +G+ P EH CMVDLLGRSG LDEA + I+ + +P +++ + L +C H
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
+ +L E +LQ +EP N ++++ N+Y+ L RWEDV RIR ++ + ++
Sbjct: 579 RDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Score = 167 bits (424), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 37/331 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + ++ C++ GRQ+HG L++ +S+ + +L+ MY + G L + VF +
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
K RN+ +WN++++ G + A+ L + + G KPD TWNS++SG++ G+ +A
Sbjct: 151 K-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDA 209
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ ++MQ G+ PS ++S+L A A+ LKLGK HG+++R L D + T LI M
Sbjct: 210 IAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDM 269
Query: 193 YMKCGQPSWARRFFDQFE----------------------------------IKPDDPAF 218
Y+K G +AR FD + IKP D
Sbjct: 270 YIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP-DAIT 328
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++ SGY G+ E A+++ M+++ V PN S+ A+ S C G+ AL++F M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ G+ P ++ +LG L +E+
Sbjct: 389 EE-GVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 119/249 (47%), Gaps = 20/249 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T +++ L L G++VHG L+ D + TALVDMY K G L A +
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K ++++ +WN M+ G + GR E+ + F + G +PD T+ S++S G+
Sbjct: 454 FWGIK-NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL 512
Query: 129 RFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E +K F+ M+S G++P+++ C+ +L L E + L D +
Sbjct: 513 VQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD------EAWDFIQTMSLKPDAT 566
Query: 185 MATALIS-----MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ A +S ++ + +W R ++P + A + MI+ Y +E I
Sbjct: 567 IWGAFLSSCKIHRDLELAEIAWKRLQV----LEPHNSANYMMMINLYSNLNRWEDVERIR 622
Query: 240 DLMQQEKVK 248
+LM+ +V+
Sbjct: 623 NLMRNNRVR 631
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 25 LYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNT 83
+Y G +HG L + SDT + +A + Y +C L A+ +F E+ R+ L WN
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP-KRDDLAWNE 59
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
++ + +G EKA+ELF + G K +T
Sbjct: 60 IVMVNLRSGNWEKAVELFREMQFSGAKAYDST---------------------------- 91
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+ +L C++ G++ HG+V+R L + SM +LI MY + G+ +R
Sbjct: 92 -------MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSR 144
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
+ F+ +K + + WN+++S Y + G + A+ + D M+ +KP+ ++ ++LS
Sbjct: 145 KVFNS--MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYAS 202
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
G A+ + M GLKP ++ + G L
Sbjct: 203 KGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 4/163 (2%)
Query: 166 LGKETHGHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LG HG +I+ L N D + +A + Y +C +A + FD+ K DD A WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMP-KRDDLA-WNEIVM 62
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
R+G +E AVE+F MQ K ++ V +L C + + QI + GL+
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYV-LRLGLE 121
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++ + R+G+L+ +R++ + + +S ++S+L +
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSS 164
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 216/383 (56%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +V+++C+ + G+QVH L +K +S +G++L+DMY K
Sbjct: 141 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK---------- 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S NI ++A +F+ L D + ++ISG++Q G+
Sbjct: 191 ------SENI----------------QEARRVFDTLPER----DVVSCTAIISGYAQKGL 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++ S GM + T++++A + L++L GK+ H ++R +L ++ +
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ ++RR FD + WNAM+ GYGR+G + +F + +E VK
Sbjct: 285 LIDMYSKCGKLLYSRRVFDN--MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VK 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S + +AVLS C H G VD+ L IF + + H+GC++DLLGRSGRL++A
Sbjct: 342 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 401
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P E T S++ SLLGAC H N +GE +A KL EMEPEN +VILSNIYA G
Sbjct: 402 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 461
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV ++R+++ ++ +TK PG S
Sbjct: 462 WKDVFKVRKLMLEKTVTKEPGQS 484
>gi|224065074|ref|XP_002301657.1| predicted protein [Populus trichocarpa]
gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 207/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP + F + + ACA L L GR VH +K + D ++ L+ +Y +C C
Sbjct: 27 EPGNFAFSTALKACADLRELWVGRGVHAQVVKSSEGPDQVVNNGLLRLYTQCECFNEVLK 86
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RN+ +WN++I+G + K D +LG
Sbjct: 87 VFDQMP-ERNVASWNSLISGFV--------------------KED------------KLG 113
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F +MQ GM S +T++L CA ++AL GKE H ++++ D +
Sbjct: 114 ---EALDVFRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKSARRPDVLVLN 170
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY+KCG + RR FD ++ D WN M++GY NG A+++F+ M +
Sbjct: 171 SLVDMYVKCGVVDYGRRLFDG--MRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMASCGI 228
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+A+LS C HAG + ++F M+ DFG+ P EH+ C+VD+LGR+GR+D A
Sbjct: 229 RPDDVTFIALLSGCSHAGLTEDGQKLFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAAL 288
Query: 308 ELIRELPEPTV-SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+++ +P T S++ SLL +C H L E +A +L E+EP NP +V+LSNIYA G
Sbjct: 289 VVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAG 348
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ V +R+M+ R++ K G S
Sbjct: 349 MWDSVNMVREMMQTRRIRKEAGCS 372
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 116/252 (46%), Gaps = 10/252 (3%)
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
M G+S+ G EA ++ +M M P ++ L ACADL L +G+ H V+++
Sbjct: 1 MAIGYSKNGFLREALLVYVEMLWNCMEPGNFAFSTALKACADLRELWVGRGVHAQVVKSS 60
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D+ + L+ +Y +C + + FDQ + + A WN++ISG+ + + A+++
Sbjct: 61 EGPDQVVNNGLLRLYTQCECFNEVLKVFDQ--MPERNVASWNSLISGFVKEDKLGEALDV 118
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F MQ+E + + + +L C + +I + +P +VD+
Sbjct: 119 FRRMQREGMGFSWVTLTTILPICARVTALLSGKEIHAQIVKS-ARRPDVLVLNSLVDMYV 177
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGAC----WCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G +D R L + ++ ++++L + + DL EMA + P++ T
Sbjct: 178 KCGVVDYGRRLFDGMRSKDLTSWNTMLTGYAINGYMRVAMDLFNEMAS--CGIRPDDVTF 235
Query: 355 FVILSNI-YAGL 365
+LS +AGL
Sbjct: 236 IALLSGCSHAGL 247
>gi|225443851|ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
mitochondrial [Vitis vinifera]
Length = 533
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/395 (35%), Positives = 221/395 (55%), Gaps = 19/395 (4%)
Query: 7 DEPNSVTFISVISA--CAS----LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
++P+ TF ++ A CAS L G+ VH L+ +SD ++ TALVD Y+K G
Sbjct: 139 EKPDGFTFSMILKATGCASGGIFPLTYSLGKVVHAQILRSNVESDDVLYTALVDSYVKNG 198
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A VF ++ +N+L +MI+G M G E A ++F+ + D +N+MI
Sbjct: 199 KVGYARRVF-DMMLDKNVLCSTSMISGYMSQGSVEDAEDIFK----RTVEKDVVVFNAMI 253
Query: 121 SGFSQ-LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
G+S+ + + +++ MQ P++ SV+ AC+ L+ ++G++ +++ +
Sbjct: 254 EGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGACSVLTVFEIGQQVQSQLVKMNF 313
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEI 238
D M +ALI MY KCG+ ARR FD P+ F W +MI GYG+NG A+E+
Sbjct: 314 YNDIKMGSALIDMYSKCGRIEDARRVFDHM---PEKNVFSWTSMIDGYGKNGNSNEALEL 370
Query: 239 FDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F MQ E VKPN +F++ LSACGHAG V K I M+ D+ LKP+ EH+ CMVDLL
Sbjct: 371 FSRMQIECHVKPNYVTFLSALSACGHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLL 430
Query: 298 GRSGRLDEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NPTPF 355
GR+G L +A E + +PE P V+ +LL +C H + ++ A ++ ++ + P +
Sbjct: 431 GRAGSLQQAWEFVMRMPEKPGSDVWAALLSSCQLHGDVEMASMAAHEIFKLNSDGRPGAY 490
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
V LSN A G+W+ V +RQ++ R ++K G S
Sbjct: 491 VALSNALAAAGKWDSVSEVRQLMKVRGVSKDTGCS 525
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 167/397 (42%), Gaps = 76/397 (19%)
Query: 6 SDEPNSVTFISVISACASLLYLQF---GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
SD +S T IS+ A + F G+++H LKI + +T + L+ ++LK CL
Sbjct: 34 SDYISSPTAISLSVALQHYINSDFPSHGQKIHSHILKIGFEPNTNVSIKLLILHLKSRCL 93
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +F E+ + +N MI+G + +G+ E+ + L L KPD T+ SMI
Sbjct: 94 RYARQLFDEMH-QPTLSAYNYMISGYLKHGQIEELLNLVSRLTFSYEKPDGFTF-SMI-- 149
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+++TG C + + LGK H ++R+++ D
Sbjct: 150 ----------------LKATG------CASGGIFPL----TYSLGKVVHAQILRSNVESD 183
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIK-----------------------------P 213
+ + TAL+ Y+K G+ +ARR FD K
Sbjct: 184 DVLYTALVDSYVKNGKVGYARRVFDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVE 243
Query: 214 DDPAFWNAMISGYGRNGEY-ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D +NAMI GY ++ E ++E++ MQ+ +P ++F +V+ AC L
Sbjct: 244 KDVVVFNAMIEGYSKSVETARRSLEVYIDMQRLNFRPTMSTFASVIGACS-------VLT 296
Query: 273 IFTMMDDDFGLKPKQEHFG------CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+F + K + ++D+ + GR+++AR + +PE V + S++
Sbjct: 297 VFEIGQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIEDARRVFDHMPEKNVFSWTSMID 356
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ NS+ E+ ++Q P LS + A
Sbjct: 357 GYGKNGNSNEALELFSRMQIECHVKPNYVTFLSALSA 393
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 14/254 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ P TF SVI AC+ L + G+QV +K+ +D +G+AL+DMY KCG +
Sbjct: 276 LNFRPTMSTFASVIGACSVLTVFEIGQQVQSQLVKMNFYNDIKMGSALIDMYSKCGRIED 335
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGF 123
A VF + +N+ +W +MI G NG S +A+ELF + E KP+ T+ S +S
Sbjct: 336 ARRVFDHMP-EKNVFSWTSMIDGYGKNGNSNEALELFSRMQIECHVKPNYVTFLSALSAC 394
Query: 124 SQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADL 179
G+ + + + E M+ ++ P ++ C+ +L L ++ V+R
Sbjct: 395 GHAGLVAKGWTILESMERDYLLKPRMEHYACMVDLLGRAGSL------QQAWEFVMRMPE 448
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPD-DPAFWNAMISGYGRNGEYESAVE 237
+ AL+S G A + F++ D P + A+ + G+++S E
Sbjct: 449 KPGSDVWAALLSSCQLHGDVEMASMAAHEIFKLNSDGRPGAYVALSNALAAAGKWDSVSE 508
Query: 238 IFDLMQQEKVKPNS 251
+ LM+ V ++
Sbjct: 509 VRQLMKVRGVSKDT 522
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 216/385 (56%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V + +I AC +L + + G +HG ++ + D ++ T+LVDMY K G L A
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASC 262
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF R +L N + +W+++ISGF+Q G
Sbjct: 263 VF------RRMLYKNVI------------------------------SWSALISGFAQNG 286
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +L MQS G P + SVL AC+ + LKLGK HG+++R L+ D +T
Sbjct: 287 FAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR-RLHFDCVSST 345
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG S+AR FDQ + D WNA+I+ YG +G E A+ +F M++ V
Sbjct: 346 AVIDMYSKCGSLSFARTVFDQISFR--DSISWNAIIASYGIHGSGEEALSLFLQMRETNV 403
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ A+F ++LSA H+G V+K F++M +++ ++P ++H+ CMVDLL R+GR++EA+
Sbjct: 404 KPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQ 463
Query: 308 ELIRE-LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI + EP ++++ +LL C H +GE A K+ E+ P++P + ++SN +A
Sbjct: 464 ELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATAR 523
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW++V +R+++ + K+PG S
Sbjct: 524 RWDEVAEVRKIMKKTGMKKVPGYSV 548
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 52/359 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T+ V+ AC L L+ G + + D +G A++++Y KCG + A
Sbjct: 102 RPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMR 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ G R+++ W TMI G+ NG++ +A++++ + + + D G LG
Sbjct: 162 VFDKM-GRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGD---------GVVMLG 211
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + AC L K+G HG++IR D+ D + T
Sbjct: 212 L--------------------------IQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQT 245
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY K G A F + K + W+A+ISG+ +NG +A+++ MQ
Sbjct: 246 SLVDMYAKNGHLELASCVFRRMLYK--NVISWSALISGFAQNGFAGNALQLVVDMQSFGY 303
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC-----MVDLLGRSGR 302
KP+S S V+VL AC G + + G ++ HF C ++D+ + G
Sbjct: 304 KPDSVSLVSVLLACSQVGFLKLGKSV-------HGYIVRRLHFDCVSSTAVIDMYSKCGS 356
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
L AR + ++ +++++ + H + + + ++++E ++P++ T +LS
Sbjct: 357 LSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLS 415
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 9/235 (3%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G E A ++F+ G WN+MI +S+ G FEA L+ +M S G+ P
Sbjct: 53 GHIESARQVFDKSPQCGVDA----WNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTY 108
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
T VL AC L+ G+ET + D + A++++Y KCG+ A R FD+
Sbjct: 109 TVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGR 168
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ D W MI+G +NG+ AV+I+ M +++V+ + + ++ AC GH L
Sbjct: 169 R--DLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGL 226
Query: 272 QIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
I M+ D + + +VD+ ++G L+ A + R + V + +L+
Sbjct: 227 SIHGYMIRKDIIMDVIVQ--TSLVDMYAKNGHLELASCVFRRMLYKNVISWSALI 279
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 151/450 (33%), Positives = 236/450 (52%), Gaps = 66/450 (14%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+++C++ PN TF ++ C + + G ++H LK + D + +L+ MY CG
Sbjct: 151 VRKCVA--PNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCG 208
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL---------------- 104
+ A +F E+ +++TWN+MI G + NG A ELFE +
Sbjct: 209 RIGDARAMF-EVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYV 267
Query: 105 -------AHEGFKPDP----ATWNSMISGFSQ---------------------------L 126
A + F P +WN MI G++Q L
Sbjct: 268 GNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLAL 327
Query: 127 GMRF----EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNK 181
+R E ++F+KM M P+ + SVL+ACA L L GK H ++ +
Sbjct: 328 YVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEP 386
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D ++TAL++MY KCG AR FD+ + WN+MI GYG +G+ + A+E+F
Sbjct: 387 DVLLSTALLTMYAKCGAMDLARDVFDKMSNR--SVVSWNSMIMGYGMHGQADKALEMFLD 444
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M++ PN A+F+ VLSAC H+G + + F +M + ++PK EH+GCMVDLLGR+G
Sbjct: 445 MEKRGPMPNDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAG 504
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+ + ELIR++P E +++ +LL AC H NS+L E +A +L E+EP + P+++LSN
Sbjct: 505 LMKDLEELIRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSN 564
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
IYA G+W+DV +R+M+ +R LTK G S
Sbjct: 565 IYAAEGKWDDVEIVRKMMKERGLTKTTGFS 594
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 20/235 (8%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTS 153
+ A+ LFEGL +PD N+++ + + + A + E+M + P+
Sbjct: 109 QHAVSLFEGLE----EPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPL 164
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
++ C ++ ++ G++ H +++ D + +LI MY CG+ AR F+ I
Sbjct: 165 LVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSIS- 223
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MI GY +NGE +A E+F+ M P F G+ G+ D
Sbjct: 224 -DLVTWNSMIDGYVKNGEIGAARELFEEM------PERDLFSWNSMIAGYVGNGD----- 271
Query: 274 FTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
T +D F P ++ + CM+D + ++ A EL +P V ++ +L
Sbjct: 272 MTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLA 326
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/384 (36%), Positives = 212/384 (55%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ V +V+SAC L L + +H K + D + + L+ Y +CG L A+
Sbjct: 190 PDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRF 249
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQE +NI+ WNTMI + + E +LF+ + D +WNSMI GF+++G
Sbjct: 250 FQETP-MKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR----DVVSWNSMIGGFARIGQ 304
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +M+ +G+ P+ + S LSACA AL G H +V + D+N+D S+ ++
Sbjct: 305 YQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS 364
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A + F+ E D W +++ G +G E A+ F M++ +V+
Sbjct: 365 LIDMYSKCGDIDKAVQIFE--ESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQ 422
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + V VLSAC HAG +D+ F M+ FGL PK EH+GCMVDLLGR G L EA +
Sbjct: 423 PDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYD 482
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P E ++ + L AC H N +LGE A +L ++P +P V+LSN+YA +
Sbjct: 483 LIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAK 542
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ +R+ I + L K PG S+
Sbjct: 543 WDRSMGLRKEIKKKGLKKSPGCSS 566
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 69/390 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF+ ++ A S ++ G +VH ++ + AL+ Y+ CG +
Sbjct: 88 RPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQ 147
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E++ ++ W +I + EKA+ELF + G PD
Sbjct: 148 VFDEMR-QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD--------------- 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +++V+SAC L L + K H + ++ + D +++
Sbjct: 192 --------------------MVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPAF 218
LIS Y +CG +A RFF + F+ PD D
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVS 291
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN+MI G+ R G+Y+ A+ F M+ V PN+ + ++ LSAC G +D I +D
Sbjct: 292 WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+ + ++D+ + G +D+A ++ E + + S++ H +
Sbjct: 352 KN-DMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410
Query: 339 EMAMKLQE--MEPENPTPFVILSN-IYAGL 365
K++E ++P++ T +LS +AGL
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHG 172
WN+MI + G+ L MQ G+ P+ +L A +K G+E H
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
V+R E ++ AL+ Y+ CG R+ FD E++ W +I Y
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFD--EMRQPGLVLWTLIIRAYVCVTFP 173
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHF 290
E A+E+F M++ + P+ + V+SACG G V KA+ F + G++
Sbjct: 174 EKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFI---EKSGIEVDAFVS 230
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
++ G G LD A +E P + V+++++ H N +LG+++ Q M
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQL---FQSMPDR 287
Query: 351 NPTPFVILSNIYAGLGRWED 370
+ + + +A +G++++
Sbjct: 288 DVVSWNSMIGGFARIGQYQE 307
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 216/383 (56%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +V+++C+ + G+QVH L +K +S +G++L+DMY K
Sbjct: 109 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK---------- 158
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S NI ++A +F+ L D + ++ISG++Q G+
Sbjct: 159 ------SENI----------------QEARRVFDTLPER----DVVSCTAIISGYAQKGL 192
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++ S GM + T++++A + L++L GK+ H ++R +L ++ +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ ++RR FD + WNAM+ GYGR+G + +F + +E VK
Sbjct: 253 LIDMYSKCGKLLYSRRVFDN--MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VK 309
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S + +AVLS C H G VD+ L IF + + H+GC++DLLGRSGRL++A
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P E T S++ SLLGAC H N +GE +A KL EMEPEN +VILSNIYA G
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 429
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV ++R+++ ++ +TK PG S
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQS 452
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 217/386 (56%), Gaps = 11/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ ++ +S IS+C+ L + +G+ HG L+ +S I AL+DMY+KC A +
Sbjct: 334 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 393
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ ++TWN+++AG + NG + A E F + + +WN++IS Q M
Sbjct: 394 FDRM-SNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNI----VSWNTIISALVQENM 448
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA ++F MQS V ++ VT S+ SAC L AL L K + ++ + + D +
Sbjct: 449 YEEAIEVFHYMQSQECV-NVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLG 507
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+ M+ +CG P A F+ + D + W A I G E A+E+F+ M ++
Sbjct: 508 TTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNVERAIELFNEMIEQG 565
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+ F+ L+AC H G V + +IF M+ G+ P+ H+GCMVDLLGR+G L+EA
Sbjct: 566 LKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEA 625
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI+++P EP +++SLL AC N ++ A K+Q + PE +V+LSN+YA
Sbjct: 626 LQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASA 685
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW D+ ++R + ++ L K PG S
Sbjct: 686 GRWNDMAKVRLSMKEKGLRKPPGTSV 711
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 151/345 (43%), Gaps = 71/345 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT + VISACA L L+ G +V+ + + ++ +ALVDMY+KC + A +
Sbjct: 233 PNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRL 292
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E G+ N+ N M + + G +++A+ + + G +PD +
Sbjct: 293 FDEY-GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS------------- 338
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ S +S+C+ L + GK HG+V+R +++ A
Sbjct: 339 ----------------------MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 376
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----------------- 231
LI MYMKC + A R FD+ K WN++++GY NGE
Sbjct: 377 LIDMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIV 434
Query: 232 --------------YESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
YE A+E+F MQ QE V + + +++ SACGH G +D A I+
Sbjct: 435 SWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYY 494
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
++ + ++ +VD+ R G + A + L VS +
Sbjct: 495 IEKN-RIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAW 538
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 146/321 (45%), Gaps = 44/321 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF +S CA G Q+HGL +K++ D + +LV Y +CG L CA V
Sbjct: 131 PDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKV 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN+++W SMI G+++
Sbjct: 191 FDEM-SERNVVSWT-----------------------------------SMICGYARREF 214
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF +M + ++P+ + V+SACA L L+ G++ + + + + ++ M +
Sbjct: 215 AKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMIS 274
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MYMKC A+R FD++ D NAM S Y R G + A+ + +LM +
Sbjct: 275 ALVDMYMKCNAIDIAKRLFDEYGASNLD--LCNAMASNYVRQGLTKEALGVLNLMMDSGI 332
Query: 248 KPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+P+ S ++ +S+C ++ K+ + + + G + ++D+ + R D
Sbjct: 333 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRN---GFESWDNICNALIDMYMKCHRQDT 389
Query: 306 ARELIRELPEPTVSVYHSLLG 326
A + + TV ++S++
Sbjct: 390 AFRIFDRMSNKTVVTWNSIVA 410
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 4/198 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+NS+I G++ G+ EA LF +M ++G+ P LS CA G + HG +I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D KD + +L+ Y +CG+ AR+ FD E+ + W +MI GY R + A
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFD--EMSERNVVSWTSMICGYARREFAKDA 218
Query: 236 VEI-FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
V++ F +++ E V PNS + V V+SAC ++ +++ + D G++ +V
Sbjct: 219 VDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDS-GIEVNDLMISALV 277
Query: 295 DLLGRSGRLDEARELIRE 312
D+ + +D A+ L E
Sbjct: 278 DMYMKCNAIDIAKRLFDE 295
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 210/383 (54%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVTF +V+ ACA + +L+ G+++H ++ D + AL DMY KCGCL A V
Sbjct: 309 PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRV 368
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ R+ +++N +I G +++ LF + +G K D ++
Sbjct: 369 FK--ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSY------------ 414
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
V+SACA+L+ALK GKE HG +R L+ +A A
Sbjct: 415 -----------------------MGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANA 451
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y+KCG+ A + F Q I D A WN+MI GYG GE A+ +F+ M+++ V+
Sbjct: 452 LLDFYIKCGRIDLAGKVFRQ--IPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVE 509
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+S S++AVLSAC H G V++ + F M +KP Q H+ CMVDLLGR+G ++EA +
Sbjct: 510 YDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPTQMHYACMVDLLGRAGLIEEAVK 568
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI LP EP +V+ +LLGAC H +L A L +++P++ + +LSN+YA G+
Sbjct: 569 LIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGK 628
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ ++R+++ R K PG S
Sbjct: 629 WDEANQVRKLMKSRGAKKNPGCS 651
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 46/321 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSVTF S++ L FG+++HG +L+ +SD + AL+DMY K G A N
Sbjct: 207 KPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANALIDMYAKSGRSLQASN 266
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ G +NI++ WN+M++ F+Q
Sbjct: 267 VFNQI-GEKNIVS-----------------------------------WNAMVANFAQNR 290
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A L +MQ+ G +P+ T+VL ACA + L+ GKE H IR + D ++
Sbjct: 291 LELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSN 350
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY KCG + ARR F+I D +N +I GY + ++ +F M + +
Sbjct: 351 ALTDMYAKCGCLNLARRV---FKISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGM 407
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF---GCMVDLLGRSGRLD 304
K + S++ V+SAC + + + ++ + K H ++D + GR+D
Sbjct: 408 KLDVVSYMGVISACANLAALKQGKEVHGLAVR----KHLHTHLFIANALLDFYIKCGRID 463
Query: 305 EARELIRELPEPTVSVYHSLL 325
A ++ R++P + ++S++
Sbjct: 464 LAGKVFRQIPSRDTASWNSMI 484
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ ACA L +Q GR++HG+ K+ SD +G L+ Y CG L VF E+
Sbjct: 9 TFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEM 68
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ D +WNS+I FS G EA
Sbjct: 69 ------------------------------------LERDVVSWNSVIGVFSVHGFYAEA 92
Query: 133 FKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
LF +M +G P++ + SVL CA L G++ H +V++ L+ ++ AL+
Sbjct: 93 IHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVD 152
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
+Y KCG +RR FD EI + WNA+I+ + A+E+F LM VKPNS
Sbjct: 153 VYGKCGYVKDSRRVFD--EISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNS 210
Query: 252 ASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F ++L D K + F++ FGL+ ++D+ +SGR +A +
Sbjct: 211 VTFSSMLPVLVELKLFDFGKEIHGFSL---RFGLESDIFVANALIDMYAKSGRSLQASNV 267
Query: 310 IRELPEPTVSVYHSLLG 326
++ E + +++++
Sbjct: 268 FNQIGEKNIVSWNAMVA 284
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 38/266 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN V+ +SV+ CA L GRQ+H +K S +G ALVD+Y KCG + +
Sbjct: 106 RPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRR 165
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ SE+ + +WN++I+ + L
Sbjct: 166 VFDEI---------------------SER---------------NGVSWNAIITSLAYLE 189
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F M G+ P+ +S+L +L GKE HG +R L D +A
Sbjct: 190 RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVAN 249
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY K G+ A F+Q I + WNAM++ + +N +AV++ MQ +
Sbjct: 250 ALIDMYAKSGRSLQASNVFNQ--IGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGE 307
Query: 248 KPNSASFVAVLSACGHAGHVDKALQI 273
PNS +F VL AC G + +I
Sbjct: 308 IPNSVTFTNVLPACARIGFLRPGKEI 333
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 217/384 (56%), Gaps = 37/384 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ ++ S+ISAC + GR +HGL +K + I AL+ MYLK
Sbjct: 299 EPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSD------- 351
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G ++A+ +FE L FK D +WNS+++G SQ G
Sbjct: 352 -----------------------YGSMKEALCIFESLE---FK-DRVSWNSILTGLSQTG 384
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K F M+S M ++VL +C+DL+ +LG++ H ++ L +E +++
Sbjct: 385 SSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGLESNEFVSS 444
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG ARR F+ E + WNA++ GY ++G+ A+++F LM+ +KV
Sbjct: 445 SLIFMYSKCGIIEDARRSFE--EASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKV 502
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + +FVAVL+AC H G V++ + M+ D+G+ P+ EH+ C VDL GRSGRL+EA+
Sbjct: 503 KMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAK 562
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI E+P +P +V+ + LGAC N +L ++A L EMEPE +V+LSN+Y L
Sbjct: 563 ALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMYGNLM 622
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ ++++++ +R + K+PG S
Sbjct: 623 RWDEKAKVKRLMKERGVKKVPGWS 646
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 157/387 (40%), Gaps = 73/387 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + TF S++ A G+QVH + +K+ + G+AL+DMY KC L A+
Sbjct: 96 ELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYL 155
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------- 116
F + N ++WN MI G G E A L + + EG K D T+
Sbjct: 156 SFLSI-SKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDAD 214
Query: 117 ------------------------NSMISGFSQLGMRFEA-------------------- 132
N++I+ +S+ G +A
Sbjct: 215 FCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLL 274
Query: 133 ------------FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
FKL MQ G P L TS++SAC + + G+ HG VI+
Sbjct: 275 AAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFE 334
Query: 181 KDESMATALISMYMKC--GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ ++ ALISMY+K G A F+ E K D WN++++G + G E AV+
Sbjct: 335 QSVPISNALISMYLKSDYGSMKEALCIFESLEFK--DRVSWNSILTGLSQTGSSEDAVKS 392
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M+ + + SF AVL +C QI + +GL+ + ++ +
Sbjct: 393 FLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLA-LKYGLESNEFVSSSLIFMYS 451
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLL 325
+ G +++AR E + + +++L+
Sbjct: 452 KCGIIEDARRSFEEASKNSSITWNALM 478
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 131/305 (42%), Gaps = 20/305 (6%)
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H++ +L ++ T N ++ G A LF+ + D +WN+MI+G
Sbjct: 21 HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMR----DSVSWNTMIAGHIN 76
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G ++ + M+S G S+L A LG++ H +I+ ++
Sbjct: 77 CGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYA 136
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+AL+ MY KC + A F I + WNAMI+GY + G+ E+A + D M+QE
Sbjct: 137 GSALLDMYAKCEKLEDAYLSF--LSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQE 194
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
K + ++ +L A + Q+ + GL+ ++ + G LD+
Sbjct: 195 GEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKH-GLELVNTMCNALITSYSKCGSLDD 253
Query: 306 AREL------IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVI 357
A+ + IR+L ++SLL A DL ++ + +QE EP+ + I
Sbjct: 254 AKRIFDSSAGIRDLV-----TWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSI 308
Query: 358 LSNIY 362
+S +
Sbjct: 309 ISACF 313
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 219/383 (57%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++TF +I A + + + G Q H ++ Q+D + +LV MY CG + A +
Sbjct: 115 PDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRI 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ G R++++W +M+AG G E A E+F+ + H TW+ MI+G+++
Sbjct: 175 FGQM-GFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNC 229
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LFE M+ G+V + + SV+S+CA L AL+ G+ + +V+++ + + + TA
Sbjct: 230 FEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA 289
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ M+ +CG A F+ + D W+++I G +G A+ F M
Sbjct: 290 LVDMFWRCGDIEKAIHVFEG--LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI 347
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P +F AVLSAC H G V+K L+I+ M D G++P+ EH+GC+VD+LGR+G+L EA
Sbjct: 348 PRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAEN 407
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++ +P + +LLGAC + N+++ E + L +++PE+ +V+LSNIYA G+
Sbjct: 408 FILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQ 467
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ + +R M+ ++ + K PG S
Sbjct: 468 WDKIESLRDMMKEKLVKKPPGWS 490
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 40/255 (15%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ +N +I FS +AF + +M + + P ++ A +++ + +G++T
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ---------------------- 208
H ++R D + +L+ MY CG + A R F Q
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 209 ------FEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
F+ P F W+ MI+GY +N +E A+++F+ M++E V N V+V+S+C
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 262 GHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEP 316
H G ++ + + + M + L +VD+ R G +++A + LPE
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGT------ALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 317 TVSVYHSLLGACWCH 331
+ S++ H
Sbjct: 314 DSLSWSSIIKGLAVH 328
>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
Length = 598
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 207/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VT SV+ AC +L + G+ VHG + EK+ + ++G AL+DMY+KC L A V
Sbjct: 214 PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDLARRV 273
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L +R+I++W MISG Q
Sbjct: 274 FDMLL-ARDIVSWTV-----------------------------------MISGLVQCKR 297
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F MQ +G+ P +++VLSACA L AL+ G+ H ++ R + D + T+
Sbjct: 298 PSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTS 357
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY+KCG A F + +K + + WNA+I+G+ +G A++ FD M +
Sbjct: 358 VVDMYVKCGCLDTAVSIFQEMPLK--NVSSWNALINGFALHGRGREALDCFDRMVASGLH 415
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL AC H+G V + Q+F +M + L P ++H+GCMVDLLGR+G + EA +
Sbjct: 416 PNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYD 475
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P P V + +LL AC H D +++ M + E+E +V+LSN+YA R
Sbjct: 476 VIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQILMHIHELESSGNGIYVLLSNMYAVSDR 535
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W DVG+ R +N++ + K PG S
Sbjct: 536 WADVGKARGFMNEKGMQKEPGSS 558
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 136/325 (41%), Gaps = 43/325 (13%)
Query: 8 EPNSVTFISVISACASLLY-LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
P+ T + + ACA L L+ G Q H + K + ALV Y CG A
Sbjct: 114 RPDGYTLPAALKACARLGGGLREGCQAHAVAEKAGFLGRVPVQNALVTFYGACGQCGDAR 173
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ + D +W +++S F++
Sbjct: 174 KVFDEMA------------------------------------ERDVVSWTALLSAFTRG 197
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
GM EA + +M T P+ + SVL AC +L + GK HG R + + +
Sbjct: 198 GMFMEALGVLAEMDVT---PNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVG 254
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY+KC + ARR FD + D W MISG + A+E+F+ MQ
Sbjct: 255 NALLDMYVKCEKLDLARRVFDMLLAR--DIVSWTVMISGLVQCKRPSEALEVFNAMQISG 312
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP+ VLSAC G ++ + ++ G++ +VD+ + G LD A
Sbjct: 313 VKPDKVVLSTVLSACASLGALESGRWVHEYIERK-GIEWDVHVGTSVVDMYVKCGCLDTA 371
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
+ +E+P VS +++L+ H
Sbjct: 372 VSIFQEMPLKNVSSWNALINGFALH 396
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V +V+SACASL L+ GR VH + + D +GT++VDMY+KCGCL A +
Sbjct: 314 KPDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVS 373
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+FQE+ +N+ +WN +I G L+GR +A++ F+ + G P+ T+ +++ G
Sbjct: 374 IFQEMP-LKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSG 432
Query: 128 MRFEAFKLFEKMQST 142
+ E +LFE M +
Sbjct: 433 LVQEGRQLFELMTKS 447
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 216/383 (56%), Gaps = 40/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +V+++C+ + G+QVH L +K +S +G++L+DMY K
Sbjct: 109 PNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAK---------- 158
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S NI ++A +F+ L D + ++ISG++Q G+
Sbjct: 159 ------SENI----------------QEARRVFDTLPER----DVVSCTAIISGYAQKGL 192
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++ S GM + T++++A + L++L GK+ H ++R +L ++ +
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ ++RR FD + WNAM+ GYGR+G + +F + +E VK
Sbjct: 253 LIDMYSKCGKLLYSRRVFDN--MLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VK 309
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S + +AVLS C H G VD+ L IF + + H+GC++DLLGRSGRL++A
Sbjct: 310 PDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALN 369
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P E T S++ SLLGAC H N +GE +A KL EMEPEN +VILSNIYA G
Sbjct: 370 LIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGM 429
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV ++R+++ ++ +TK PG S
Sbjct: 430 WKDVFKVRKLMLEKTVTKEPGQS 452
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 216/384 (56%), Gaps = 10/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + +++SAC +++ R ++ ++ + + DT + TALV MY GC+ A
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ RN+ M++G GR + A +F+ + K D W +MIS + +
Sbjct: 270 FRKM-SVRNLFVSTAMVSGYSKCGRLDDAQVIFD----QTEKKDLVCWTTMISAYVESDY 324
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++FE+M +G+ P + + SV+SACA+L L K H + L + S+ A
Sbjct: 325 PQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNA 384
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI+MY KCG R D FE P + W++MI+ +GE A+ +F M+QE V
Sbjct: 385 LINMYAKCGGLDATR---DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV VL C H+G V++ +IF M D++ + PK EH+GCMVDL GR+ L EA
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREAL 501
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E+I +P V ++ SL+ AC H +LG+ A ++ E+EP++ V++SNIYA
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQ 561
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV IR+++ ++ + K G+S
Sbjct: 562 RWEDVRNIRRVMEEKNVFKEKGLS 585
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 13/350 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ +F+ ++ A + + L G ++HG+ KI D + T +DMY CG + A NVF
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG-M 128
E+ R+++TWNTMI G ++A +LFE + PD +++S + G M
Sbjct: 170 DEM-SHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 228
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
R+ ++E + + +T++++ A + + +E R ++ ++TA
Sbjct: 229 RYNR-AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE----FFRKMSVRNLFVSTA 283
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++S Y KCG+ A+ FDQ E K D W MIS Y + + A+ +F+ M +K
Sbjct: 284 MVSGYSKCGRLDDAQVIFDQTEKK--DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ S +V+SAC + G +DKA + + + + GL+ + ++++ + G LD R+
Sbjct: 342 PDVVSMFSVISACANLGILDKAKWVHSCIHVN-GLESELSINNALINMYAKCGGLDATRD 400
Query: 309 LIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFV 356
+ ++P V + S++ A H + L MK + +EP N FV
Sbjct: 401 VFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP-NEVTFV 449
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C +P+ V+ SVISACA+L L + VH +S+ I AL++MY KCG L
Sbjct: 337 CSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLD 396
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+VF+++ RN+++W++MI + ++G + A+ LF + E +P+ T+ ++ G
Sbjct: 397 ATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC 455
Query: 124 SQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADL 179
S G+ E K+F M + P L+ C+ + +++R L
Sbjct: 456 SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFG--------------RANLLREAL 501
Query: 180 NKDESMATA--------LISMYMKCGQPSW----ARRFFDQFEIKPDDPAFWNAMISGYG 227
ESM A L+S G+ A+R E++PD M + Y
Sbjct: 502 EVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRI---LELEPDHDGALVLMSNIYA 558
Query: 228 RNGEYESAVEIFDLMQQEKV 247
R +E I +M+++ V
Sbjct: 559 REQRWEDVRNIRRVMEEKNV 578
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 42/251 (16%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A NVF + + +N + + + + ++ + H
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRH------------------ 104
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+G R + F +P LK V+ V SAL G E HG + D
Sbjct: 105 -VGGRLDQF---------SFLPILKAVSKV-------SALFEGMELHGVAFKIATLCDPF 147
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ T + MY CG+ ++AR FD E+ D WN MI Y R G + A ++F+ M+
Sbjct: 148 VETGFMDMYASCGRINYARNVFD--EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKD 205
Query: 245 EKVKPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V P+ ++SACG G++ ++A+ F + +D ++ +V + +G
Sbjct: 206 SNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND---VRMDTHLLTALVTMYAGAGC 262
Query: 303 LDEARELIREL 313
+D ARE R++
Sbjct: 263 MDMAREFFRKM 273
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/383 (36%), Positives = 212/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVTF +V+ ACA + ++ G+++H ++ + D + AL DMY K G L A NV
Sbjct: 242 PNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNV 301
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +T + D ++N +I G SQ
Sbjct: 302 F------------DTSLR-------------------------DEVSYNILIVGHSQTSD 324
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ LF +MQ G+ LSACA+L+A+K GKE HG ++R + +A +
Sbjct: 325 CSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANS 384
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y KCG+ AR FD+ K D A WN MI GYG GE ++A+++F+ M+++ V+
Sbjct: 385 LLDFYTKCGRIGLARNIFDRMTNK--DVASWNTMILGYGMLGELDTAIDLFENMRKDDVE 442
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+S SF+AVLSAC H G ++K + F + G++P Q H+ CMVDLLGR+G ++EA E
Sbjct: 443 YDSVSFIAVLSACSHGGLLEKGRKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAE 501
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ LP P +++ +LLGAC + N +L A L E++PE+ + +LSN+YA GR
Sbjct: 502 LIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGR 561
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ RIR+++ R + K PG S
Sbjct: 562 WDEANRIRELMKSRGVKKSPGCS 584
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 130/313 (41%), Gaps = 58/313 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ ACA ++ GR+VHG +K+ +SD +G L+ Y CG L A
Sbjct: 38 RPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGR 97
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ + D +WN+MI FS G
Sbjct: 98 VFDEMP------------------------------------EKDLVSWNTMIGVFSVNG 121
Query: 128 MRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ +A +F M G+ P+ ++S L +L K G+E HG IR L D +A
Sbjct: 122 WHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIA 181
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY K G + A F +++ + WNAMI+ + +N AV + MQ
Sbjct: 182 NSLIDMYAKSGHSTEASNVF--YKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYG 239
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC---------MVDLL 297
PNS +F VL AC G V +I + H GC + D+
Sbjct: 240 ELPNSVTFTNVLPACARMGLVRPGKEI----------HARSIHMGCAFDLFVSNALTDMY 289
Query: 298 GRSGRLDEARELI 310
+SG L AR +
Sbjct: 290 AKSGHLKLARNVF 302
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 142/323 (43%), Gaps = 50/323 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS+T S + L + + GR+VHG ++++ +SD I +L+DMY K G A N
Sbjct: 140 KPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASN 199
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L ++N+++WN MIA F+Q
Sbjct: 200 VFYKLD-AKNVVSWNAMIA-----------------------------------NFAQNR 223
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A L +MQ G +P+ T+VL ACA + ++ GKE H I D ++
Sbjct: 224 FELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSN 283
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MY K G AR FD D +N +I G+ + + ++ +F MQ +
Sbjct: 284 ALTDMYAKSGHLKLARNVFDT---SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGL 340
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-----GCMVDLLGRSGR 302
K ++ SF+ LSAC + + + +I L K H ++D + GR
Sbjct: 341 KQDNVSFMGALSACANLTAIKQGKEIHGF------LLRKLFHIHLFVANSLLDFYTKCGR 394
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+ AR + + V+ +++++
Sbjct: 395 IGLARNIFDRMTNKDVASWNTMI 417
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 139/283 (49%), Gaps = 18/283 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ ++V+F+ +SACA+L ++ G+++HG L+ + +L+D Y KCG + A N
Sbjct: 341 KQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARN 400
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++ +WNTMI G + G + A++LFE + + + D ++ +++S S G
Sbjct: 401 IFDRMT-NKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGG 459
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC-ADLSALKLGKETHGHVIRA-DLNKDESM 185
+ + K F+++++ G+ P T + AC DL E +I+ + D ++
Sbjct: 460 LLEKGRKYFDELKARGIEP-----TQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANI 514
Query: 186 ATALIS---MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
AL+ +Y +WA FE+KP+ ++ + + Y G ++ A I +LM
Sbjct: 515 WGALLGACRIYGNLELAAWAAEHL--FELKPEHSGYYTLLSNMYAETGRWDEANRIRELM 572
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
+ VK + + HA V + ++ D GL P
Sbjct: 573 KSRGVKKSPGCSWVQIGEQAHAFVVGEKIEGL-----DLGLWP 610
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 15/216 (6%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN++I G+S G+ +++ +M G+ P VL ACAD ++ G+E HG V+
Sbjct: 10 WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG-EYES 234
+ D + L+S Y CG A R FD E+ D WN MI + NG Y
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFD--EMPEKDLVSWNTMIGVFSVNGWHYRD 126
Query: 235 AVEIFDLMQQEKVKPNS---ASFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEH 289
A+++F LM E +KPNS +SF+ VL AG I ++ D +
Sbjct: 127 ALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIA----- 181
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ +SG EA + +L V +++++
Sbjct: 182 -NSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMI 216
>gi|225444407|ref|XP_002265471.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Vitis vinifera]
Length = 470
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 224/375 (59%), Gaps = 9/375 (2%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
ACA+L + + G Q+H LTLK+ + + T L+++Y CG A VF E+ RN +
Sbjct: 99 ACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEMP-VRNSV 157
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
TWN I G+ G A L + + +P +W ++I G++++ +A LF M
Sbjct: 158 TWNVFITGLAKWGELHLACSLLDEMP----RPTVVSWTTIIDGYTRMNQPKQALALFLTM 213
Query: 140 -QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN-KDESMATALISMYMKCG 197
G+ P+ + ++ A ++L AL++ + H + ++ LN D + T+L+ Y KCG
Sbjct: 214 FLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRIRTSLLDTYAKCG 273
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
A F + K + W ++IS + +G + A+E F+ MQ+E +KPN +F++V
Sbjct: 274 CIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERMQKECLKPNRITFLSV 333
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
L+AC H G V++ L++FT M ++ + P +H+GC++D+LGR+GRLDEA ++ E+P+
Sbjct: 334 LNACSHGGLVEEGLKLFTKMVNECQISPDVKHYGCLIDMLGRAGRLDEAEKMALEIPDYV 393
Query: 318 VSV--YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
V+V + +LLGAC H N ++G + K+ EME + +V+LSNI+AG+GR+ DV R+R
Sbjct: 394 VNVVIWRTLLGACSFHGNVEMGARVTRKILEMERKYGGDYVLLSNIFAGVGRFWDVERVR 453
Query: 376 QMINDRQLTKLPGIS 390
+++++R +K+PG+S
Sbjct: 454 RLMDERNASKVPGLS 468
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 10/180 (5%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADLSALKLG 167
D +WN ++ +S EAF LF ++ + P + +L ACA+L + G
Sbjct: 50 DVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHVYPPLSFDSFSFSFLLKACANLQHREGG 109
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ H ++ + T L+++Y CG A++ FD+ ++ + WN I+G
Sbjct: 110 LQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEMPVR--NSVTWNVFITGLA 167
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ GE A + D E +P S+ ++ +AL +F M D G+KP +
Sbjct: 168 KWGELHLACSLLD----EMPRPTVVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTE 223
>gi|242042383|ref|XP_002468586.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
gi|241922440|gb|EER95584.1| hypothetical protein SORBIDRAFT_01g048560 [Sorghum bicolor]
Length = 581
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 222/385 (57%), Gaps = 11/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF ++ L + Q+H L LK+ + T AL+ YL A
Sbjct: 103 HPDHFTFPRILPGAQPLHLVA---QLHALLLKLGFHAHTQSLNALLAAYLANARPDLASR 159
Query: 68 VFQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF+ G + ++++W TM+ G++ GR + A ELF+G+ +WN+M+SG+ +
Sbjct: 160 VFRGGGGDALDVVSWTTMVGGLVKLGRVDDARELFDGMPERNL----VSWNAMMSGYVKT 215
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A ++F++M++ G+ + + + AC AL G+E H V R+ + D+ +A
Sbjct: 216 GRFLDALEVFDEMRARGVDGNAFVAATAVVACTGAGALARGREVHRWVERSGIEMDDKLA 275
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TA++ MY KCG A R F+ + WN MI G+ +G E A+ +F LM++E
Sbjct: 276 TAVVDMYCKCGCVEEAWRVFEALPAR--GLTSWNCMIGGFAVHGRGEDALNLFGLMEREG 333
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P+ + V VL+AC HAG V + F + +G+ PK EH+GCMVDL GR+G+L+EA
Sbjct: 334 VAPDDVTLVNVLTACAHAGMVSEGRHYFNYISQRYGIVPKMEHYGCMVDLYGRAGQLEEA 393
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+++I+++P EP V V +L GA H + DLGE + ++ E++P+N +V+L+N+ A
Sbjct: 394 KKVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATA 453
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV R+R+++++R ++K G S
Sbjct: 454 GRWEDVARVRRLMDERNVSKEAGRS 478
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 208/386 (53%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T + V+SAC + G+ + S+ + AL+DMY KCG
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCG-------- 312
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
++ A ELF+G+ + D +WN+MI G+S L +
Sbjct: 313 ------------------------ETDIARELFDGIE----EKDVISWNTMIGGYSYLSL 344
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMAT 187
EA LFE M + + P+ +L ACA L AL LGK H ++ + N + S+ T
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEK 246
+LI MY KCG A R F + + A WNAM+SG+ +G E A+ +F +++ +
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSR--NLASWNAMLSGFAMHGHAERALALFSEMVNKGL 462
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+P+ +FV VLSAC AG VD Q F M D+G+ PK +H+GCM+DLL R+ + +EA
Sbjct: 463 FRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEA 522
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
L++ + EP +++ SLL AC H + GE +A +L ++EPEN FV+LSNIYAG
Sbjct: 523 EILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGA 582
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
GRW+DV RIR +ND+ + K+PG ++
Sbjct: 583 GRWDDVARIRTRLNDKGMKKVPGCTS 608
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 180/384 (46%), Gaps = 18/384 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS TF + +C G+Q+H LK+ + + T+++ MY G + A
Sbjct: 128 QPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARL 187
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R+ +++ +I G + G + A LF+ + D +WN+MISG+ Q G
Sbjct: 188 VFDK-SSLRDAVSFTALITGYVSQGCLDDARRLFDEIP----VKDVVSWNAMISGYVQSG 242
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F +MQ ++P+ + VLSAC + +LGK V + +
Sbjct: 243 RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTN 302
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ AR FD E K D WN MI GY YE A+ +F++M + V
Sbjct: 303 ALIDMYCKCGETDIARELFDGIEEK--DVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+ +L AC G +D + +D + + ++D+ + G ++ A
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSD----LGEEMAMKLQEMEPENPTPFVILSN-IY 362
+ R + ++ ++++L H +++ L EM K P++ T +LS
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNK-GLFRPDDITFVGVLSACTQ 479
Query: 363 AGLGRWEDVGR--IRQMINDRQLT 384
AGL D+G R MI D ++
Sbjct: 480 AGL---VDLGHQYFRSMIQDYGIS 500
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 49/279 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAH 66
+PN VTF+ ++ ACA L L G+ VH K + S+ + T+L+DMY KCGC+ A
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQ 125
VF+ + SRN+ +WN M++G ++G +E+A+ LF + ++G F+PD T+ ++S +Q
Sbjct: 421 RVFRSMH-SRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQ 479
Query: 126 LGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ + F M Q G+ P L+ C+ +L+ +
Sbjct: 480 AGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLA------------------------R 515
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
E A I M E++PD A W +++S +G E + +
Sbjct: 516 AEKFEEAEILM--------------KNMEMEPDG-AIWGSLLSACKAHGRVEFGEYVAER 560
Query: 242 MQQEKVKP-NSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ Q ++P N+ +FV + + AG D +I T ++D
Sbjct: 561 LFQ--LEPENAGAFVLLSNIYAGAGRWDDVARIRTRLND 597
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 119/266 (44%), Gaps = 31/266 (11%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+G A+ LFE + K + WNS+I G+S + LF +M G+ P+
Sbjct: 75 SGDLSYALSLFEE-NQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHT 133
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF- 209
+ +C A GK+ H H ++ L+ + + T++I MY G+ +AR FD+
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193
Query: 210 ----------------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
EI D WNAMISGY ++G +E A+ F
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ V PN ++ V VLSACGH + I + + D+ G + ++D+ + G
Sbjct: 254 MQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDN-GFGSNLQLTNALIDMYCKCG 312
Query: 302 RLDEARELIRELPEPTVSVYHSLLGA 327
D AREL + E V +++++G
Sbjct: 313 ETDIARELFDGIEEKDVISWNTMIGG 338
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 225/416 (54%), Gaps = 39/416 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT S ISACASL L+ G ++H + +KI D ++G +L+DMY K G L A
Sbjct: 353 EPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARR 412
Query: 68 VF----------------------------------QELKGSRNILTWNTMIAGMMLNGR 93
VF E N++TWN MI+G + NG
Sbjct: 413 VFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGD 472
Query: 94 SEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++AM+LF + +G K D A+WNS+I+G+ Q G + +A +F +MQS + P+ +
Sbjct: 473 EDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTML 532
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L ACA+L A K KE HG ++R +L + S+A LI Y K G +A+ F I
Sbjct: 533 SILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQG--IS 590
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN++I+GY +G +SA+++FD M + VKP+ +F++++ A +G VDK Q
Sbjct: 591 SKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQ 650
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F+ M +D+ + P EH M+DLLGRSG+L EA E I ++ EP ++ +LL A H
Sbjct: 651 VFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIH 710
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLP 387
N L L E+EP N + + +YA G++EDV ++R+ R TK P
Sbjct: 711 GNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRKS-EKRSETKQP 765
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/386 (27%), Positives = 176/386 (45%), Gaps = 55/386 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ ++ AC + + G+ +H L ++ + + +++ +Y KCG L CA
Sbjct: 183 PDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRF 242
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN----------- 117
F+ + R+ ++WN++I G G EK+ +LFE + EG +P TWN
Sbjct: 243 FENMD-YRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGK 301
Query: 118 ------------------------SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
SMISGF+Q R +A +LF +M G+ P+ VTS
Sbjct: 302 CDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTS 361
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+SACA L ALK G E H ++ +D + +LI MY K G+ ARR FD I
Sbjct: 362 GISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDM--ILK 419
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MI GY + G A ++F M + V PN ++ A++S G D+A+ +
Sbjct: 420 KDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDL 479
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGAC- 328
F M+ D +K + ++ ++G ++A + R++ P S+L AC
Sbjct: 480 FHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACA 539
Query: 329 ------------WCHLNSDLGEEMAM 342
C L +LG E+++
Sbjct: 540 NLVAAKKVKEIHGCILRRNLGSELSV 565
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 178/378 (47%), Gaps = 51/378 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T++ ++ +C + GR++H + + ++ + + T LV MY KCG L A
Sbjct: 84 KPN--TYMQLLQSCIDQGSAELGRKLHA-RIGLLEEMNPFVETKLVSMYAKCGSLGEARK 140
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E++ RN+ W+ +MI +S+
Sbjct: 141 VFGEMR-ERNLYAWS-----------------------------------AMIGAYSREQ 164
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M E + F M G+VP + +L AC + + GK H VIR +N + ++
Sbjct: 165 MWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSN 224
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+++++Y KCG+ S ARRFF+ + + D WN++I+GY + GE E + ++F+ MQ+E +
Sbjct: 225 SILAVYAKCGRLSCARRFFENMDYR--DRVSWNSIITGYCQKGELEKSHQLFEKMQEEGI 282
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P ++ ++++ +G D A+++ M + F + P + M+ ++ R +A
Sbjct: 283 EPGLVTWNILINSYSQSGKCDDAMELMKKM-ESFRIVPDVFTWTSMISGFAQNNRRSQAL 341
Query: 308 ELIREL----PEPTVSVYHSLLGACWCHLNSDLGEEM---AMKLQEMEPENPTPFVILSN 360
EL RE+ EP S + AC G E+ A+K+ +E +I +
Sbjct: 342 ELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLI--D 399
Query: 361 IYAGLGRWEDVGRIRQMI 378
+Y+ G ED R+ MI
Sbjct: 400 MYSKSGELEDARRVFDMI 417
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 106 HEGFKPD--PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
H+ P P ++ ++ + G +A + + G +L +C D +
Sbjct: 41 HQPLTPKLKPKVTDAHLNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGS 100
Query: 164 LKLGKETHGHV-IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
+LG++ H + + ++N + T L+SMY KCG AR+ F E++ + W+AM
Sbjct: 101 AELGRKLHARIGLLEEMN--PFVETKLVSMYAKCGSLGEARKVFG--EMRERNLYAWSAM 156
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD--- 279
I Y R + V+ F M ++ + P+ +L ACG+ G + I +++
Sbjct: 157 IGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGM 216
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
+F ++ ++ + + GRL AR + ++S++ + +
Sbjct: 217 NFNIRVSNS----ILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQ 272
Query: 340 MAMKLQE--MEPENPTPFVILSNIYAGLGRWED 370
+ K+QE +EP T + IL N Y+ G+ +D
Sbjct: 273 LFEKMQEEGIEPGLVT-WNILINSYSQSGKCDD 304
>gi|255564351|ref|XP_002523172.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537579|gb|EEF39203.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 210/367 (57%), Gaps = 7/367 (1%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L++G VH +K+ S + AL++MY K + A VF E+ ++ ++ +I
Sbjct: 205 LEYGTAVHSCAIKMGLVSMLNVSNALLNMYTKYRQMDAASRVFDEMGSKKDAVSHAILIN 264
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G + G + A ++F ++ F D WN M+ G+ + +A +LF+KM + G++P
Sbjct: 265 GYVEKGLIDLASDIF----YQIFDKDLVLWNVMLHGYIKAKRPIDALELFKKMDNEGLIP 320
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ +L+ACA LS L+ G+ H + R D+ +D + TALI MY KCG P A F
Sbjct: 321 DENTMVGILAACASLSDLQYGRVVHMFINRNDIKQDIFVKTALIDMYFKCGSPEEALVTF 380
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+ E K D W A+I G NG A+ +F M+++ ++PN A+FV+ L++C H+G
Sbjct: 381 YKMEYK--DVFTWTAVIEGLANNGYGNVALNLFKQMEEQGIQPNEATFVSALTSCRHSGL 438
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL-PEPTVSVYHSLL 325
V + Q+F M + + L+P+ EHFGC++D+L R+G L +A E ++ L PE ++ Y +L
Sbjct: 439 VKEGCQMFRKMVEVYKLQPRFEHFGCLIDVLSRAGLLAQAYEFVKLLRPEERLAAYKIVL 498
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
AC +L D+GE+ A+++ E+ P++ ++LSN YA G+WE V + R+ + K
Sbjct: 499 SACIKYLEFDVGEKAALEMAELSPQSCEMHILLSNFYALAGQWERVAKTRRTMKRLNTRK 558
Query: 386 LPGISAG 392
PGIS+G
Sbjct: 559 EPGISSG 565
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 5/152 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T + +++ACASL LQ+GR VH + + + D + TAL+DMY KCG A
Sbjct: 320 PDENTMVGILAACASLSDLQYGRVVHMFINRNDIKQDIFVKTALIDMYFKCGSPEEALVT 379
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +++ +++ TW +I G+ NG A+ LF+ + +G +P+ AT+ S ++ G+
Sbjct: 380 FYKME-YKDVFTWTAVIEGLANNGYGNVALNLFKQMEEQGIQPNEATFVSALTSCRHSGL 438
Query: 129 RFEAFKLFEKM-QSTGMVPSLK---CVTSVLS 156
E ++F KM + + P + C+ VLS
Sbjct: 439 VKEGCQMFRKMVEVYKLQPRFEHFGCLIDVLS 470
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 137/304 (45%), Gaps = 15/304 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ +++AC+ L + G+ VH +KI SD + AL+ Y L A +
Sbjct: 82 PDRYTYPLLLNACSRLSFASMGQLVHTHLIKIGLDSDIYVQNALLHFYGSIKQLNYARLL 141
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSE-KAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ R+I +WNT + + S M+LF+ L EG D T + S F+Q
Sbjct: 142 FDKMY-ERDITSWNTFMGASYASSNSVIDLMDLFKRLISEGVGADKITLVILFSAFAQAQ 200
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E+ + + S + L + +V +A ++ + V +K ++++
Sbjct: 201 CD-ESLEYGTAVHSCAIKMGLVSMLNVSNALLNMYTKYRQMDAASRVFDEMGSKKDAVSH 259
Query: 188 A-LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A LI+ Y++ G A F ++I D WN M+ GY + A+E+F M E
Sbjct: 260 AILINGYVEKGLIDLASDIF--YQIFDKDLVLWNVMLHGYIKAKRPIDALELFKKMDNEG 317
Query: 247 VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGR 302
+ P+ + V +L+AC + + + +F +D KQ+ F ++D+ + G
Sbjct: 318 LIPDENTMVGILAACASLSDLQYGRVVHMFINRND-----IKQDIFVKTALIDMYFKCGS 372
Query: 303 LDEA 306
+EA
Sbjct: 373 PEEA 376
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 8/217 (3%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHG 172
+TWN +I +S+ ++ + G P +L+AC+ LS +G+ H
Sbjct: 49 STWNCLIRAYSKTHTPIKSILVSNYFIELGSFYPDRYTYPLLLNACSRLSFASMGQLVHT 108
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI-SGYGRNGE 231
H+I+ L+ D + AL+ Y Q ++AR FD+ + D WN + + Y +
Sbjct: 109 HLIKIGLDSDIYVQNALLHFYGSIKQLNYARLLFDK--MYERDITSWNTFMGASYASSNS 166
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD---DFGLKPKQE 288
+++F + E V + + V + SA A D++L+ T + GL
Sbjct: 167 VIDLMDLFKRLISEGVGADKITLVILFSAFAQA-QCDESLEYGTAVHSCAIKMGLVSMLN 225
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++++ + ++D A + E+ +V H++L
Sbjct: 226 VSNALLNMYTKYRQMDAASRVFDEMGSKKDAVSHAIL 262
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 211/387 (54%), Gaps = 42/387 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
P+ T +SV+SACA ++ GR++H L ++ I A + +Y KCG +
Sbjct: 213 PDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV----- 267
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LFEGL+ + D +WN++I G++ +
Sbjct: 268 ---------------------------EIASGLFEGLSCK----DVVSWNTLIGGYTHMN 296
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLNKDESM 185
+ EA LF++M +G P+ + SVL ACA L A+ +G+ H ++ + + ++
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LI MY KCG A + F+ K + WNAMI G+ +G +A ++F M++
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKS--LSSWNAMIFGFAMHGRANAAFDLFSRMRKN 414
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+ + V +LSAC H+G +D IF + D+ + PK EH+GCM+DLLG +G E
Sbjct: 415 GIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKE 474
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E+I +P EP ++ SLL AC H N +L E A KL E+EPEN +V+LSNIYA
Sbjct: 475 AEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYAT 534
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
GRWEDV RIR+++N + + K+PG S+
Sbjct: 535 AGRWEDVARIREVLNGKGMKKVPGCSS 561
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 185/383 (48%), Gaps = 17/383 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF ++ +CA + GRQ+H +K+ + D T+L+ MY + G L A V
Sbjct: 81 PNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKV 140
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R++++ +I G G A ++F+ + + D +WN+MI+G+ +
Sbjct: 141 F-DXSSQRDVVSCTALITGYASRGDVRSARKVFDXIT----ERDVVSWNAMITGYVENCG 195
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV-IRADLNKDESMAT 187
EA +LF++M T + P + SVLSACA +++LG+E H V +
Sbjct: 196 YEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVN 255
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A I +Y KCG A F+ K D WN +I GY Y+ A+ +F M +
Sbjct: 256 AFIGLYSKCGDVEIASGLFEGLSCK--DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 313
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-GLKPKQEHFGCMVDLLGRSGRLDEA 306
PN + ++VL AC H G +D I +D G+ ++D+ + G ++ A
Sbjct: 314 SPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAA 373
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSNI-YA 363
++ + ++S +++++ H ++ ++ ++++ +EP++ T +LS ++
Sbjct: 374 HQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHS 433
Query: 364 GLGRWEDVGR--IRQMINDRQLT 384
GL D+GR + + D +T
Sbjct: 434 GL---LDLGRHIFKSVTQDYNIT 453
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 143/315 (45%), Gaps = 37/315 (11%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P+ WN+M+ G + +++ +M S G VP+ +L +CA + G++
Sbjct: 45 EPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQ 104
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE------------------- 210
H V++ D T+LISMY + G+ AR+ FD
Sbjct: 105 IHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGD 164
Query: 211 ----------IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
I D WNAMI+GY N YE A+E+F M + V+P+ + V+VLSA
Sbjct: 165 VRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSA 224
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
C +G ++ +I T++DD G + + L + G ++ A L L V
Sbjct: 225 CAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVS 284
Query: 321 YHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILSNI--YAGLGRWEDVGRIRQ 376
+++L+G + H+N L +E + QEM E+P +LS + A LG D+GR
Sbjct: 285 WNTLIGG-YTHMN--LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI-DIGRWIH 340
Query: 377 MINDRQLTKLPGISA 391
+ D++L + SA
Sbjct: 341 VYIDKRLKGVTNGSA 355
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 144/322 (44%), Gaps = 34/322 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPC 64
+ PN VT +SV+ ACA L + GR +H K K + + + T+L+DMY KCG +
Sbjct: 313 ESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEA 372
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
AH VF + +++ +WN MI G ++GR+ A +LF + G +PD T ++S S
Sbjct: 373 AHQVFNSMM-HKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACS 431
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ +F+ + Q + P L+ C+ +L L KE + +
Sbjct: 432 HSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAG------LFKEAEEIIHMMPME 485
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D + +L+ G A F + EI+P++ + + + Y G +E I
Sbjct: 486 PDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIR 545
Query: 240 DLMQQEKVK--PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD-- 295
+++ + +K P +S +D + F + D L P+ M++
Sbjct: 546 EVLNGKGMKKVPGCSSI-----------EIDSVVHEFIIGDK---LHPQSREIYRMLEEM 591
Query: 296 --LLGRSGRLDEARELIRELPE 315
LL +G + + E+++E+ E
Sbjct: 592 DVLLEEAGFVPDTSEVLQEMEE 613
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 229/452 (50%), Gaps = 75/452 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN F SVISACASL + G+++H +LK +S + + +L+ MY+KC A +V
Sbjct: 99 PNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSV 158
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD---------------- 112
F N +++N +I G + N + E+ +E F+ + +G PD
Sbjct: 159 FTNTP-EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTEN 217
Query: 113 -------------------PATWNSMISGFSQLGMRFE---AFKLFEK------------ 138
P N +I+ +S+L + E AF+L E+
Sbjct: 218 LKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA 277
Query: 139 -----------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ T + P TS L+ACA L+++ GK+ H H++R L +
Sbjct: 278 CSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ 337
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + AL++MY KCG +A F + + + WN +I+G+G +G E AVE+F+
Sbjct: 338 DLGVGNALVNMYAKCGCIGYAYDIFSK--MVHHNLVSWNTIIAGFGNHGLGERAVELFEQ 395
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M ++P+S +F+ +L+AC HAG VDK F M++ +G+ P EHF C++D+LGR+G
Sbjct: 396 MNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAG 455
Query: 302 RLDEARELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
RL+EA E +R+ P +P V V SLL A H + +GE +A L +++P +P+V+L
Sbjct: 456 RLNEAEEYMRKFPFWNDPVVLV--SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLL 513
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SN+YA G W+ V R+ + L K PG S
Sbjct: 514 SNLYASDGMWDSVAEARKRLKGSGLKKEPGHS 545
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T S++ C+ L+ G +H LK QSD + +++MY KCG A VF E+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
F+ + +W++MISG+ Q G A
Sbjct: 65 ------------------------------------FEKNLVSWSAMISGYDQAGEPQMA 88
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
L+ +M +VP+ SV+SACA LSA+ LG++ H ++ ++ +LISM
Sbjct: 89 IDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISM 145
Query: 193 YMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
YMKC Q S A F P+ + +NA+I+G+ N + E +E F LM+Q+ + P+
Sbjct: 146 YMKCNQCSDALSVFTN---TPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDR 202
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ VL C ++ + ++ L ++ + + EA + R
Sbjct: 203 FAFMGVLGICTTTENLKRGAELHC-QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 312 ELPEPTVSVYHSLLGAC 328
+ E V +++L+ AC
Sbjct: 262 LIEEKDVISWNTLIAAC 278
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M E + P+ TF S ++ACA L + G+Q+H ++ D +G ALV+MY KCG
Sbjct: 294 MTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCG 353
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C+ A+++F ++ N+++WNT+IAG +G E+A+ELFE + G +PD T+ ++
Sbjct: 354 CIGYAYDIFSKMV-HHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLL 412
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK 149
+ + G+ + F M+ T G+ P ++
Sbjct: 413 TACNHAGLVDKGQLYFNSMEETYGIAPDIE 442
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/383 (36%), Positives = 205/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T + V+SAC L L G +H +++ + +GT+LVDMY KCG +
Sbjct: 211 PDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNM------ 264
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
EKA +F+G+ + D +W +MI G++ G+
Sbjct: 265 --------------------------EKARSVFDGMPEK----DIVSWGAMIQGYALNGL 294
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ + P V VLSACA L AL+LG+ G V R + + + TA
Sbjct: 295 PKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTA 354
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y KCG S A F +K D WNA+ISG NG + + +F +++ +K
Sbjct: 355 LIDLYAKCGSMSRAWEVFKG--MKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIK 412
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ +L C HAG VD+ + F M F L P EH+GCMVDLLGR+G LDEA +
Sbjct: 413 PDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQ 472
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P E V+ +LLGAC H ++ L E +L E+EP N +V+LSNIY+ +
Sbjct: 473 LIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLK 532
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++ ++R +N++++ K PG S
Sbjct: 533 WDEAAKVRLSMNEKRIQKPPGCS 555
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 153/318 (48%), Gaps = 41/318 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ TF V+ ACA LL LQ G ++H L +K D + T+LV +Y KCG L AH V
Sbjct: 110 PNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKV 169
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +N+++W +I+G + G+ +A+++F L PD T
Sbjct: 170 FDDIP-DKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFT------------- 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ VLSAC L L G+ H ++ + ++ + T+
Sbjct: 216 ----------------------IVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTS 253
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG AR FD K D W AMI GY NG + A+++F MQ+E VK
Sbjct: 254 LVDMYAKCGNMEKARSVFDGMPEK--DIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVK 311
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V VLSAC G ++ + ++D ++F P ++DL + G + A
Sbjct: 312 PDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGT--ALIDLYAKCGSMSRAW 369
Query: 308 ELIRELPEPTVSVYHSLL 325
E+ + + E V+++++
Sbjct: 370 EVFKGMKEKDRVVWNAII 387
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 125/251 (49%), Gaps = 6/251 (2%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L H+ +P+ WN+MI G +A + + M+S G +P+ VL ACA L
Sbjct: 68 LFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLD 127
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L+LG + H V++ + D + T+L+ +Y KCG A + FD +I + W A+I
Sbjct: 128 LQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFD--DIPDKNVVSWTAII 185
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY G++ A+++F + + + P+S + V VLSAC G ++ I + + G+
Sbjct: 186 SGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCI-MEMGM 244
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
+VD+ + G +++AR + +PE + + +++ LN E + +
Sbjct: 245 VRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQG--YALNGLPKEAIDLF 302
Query: 344 LQEMEPENPTP 354
LQ M+ EN P
Sbjct: 303 LQ-MQRENVKP 312
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 165/370 (44%), Gaps = 47/370 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T + V+SACA L L+ G V GL + E + ++GTAL+D+Y KCG + A
Sbjct: 311 KPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWE 370
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ +K ++ + WN +I+G+ +NG + + LF + G KPD T+ ++ G + G
Sbjct: 371 VFKGMK-EKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAG 429
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + F M + + PS++ C+ +L L E H + + +
Sbjct: 430 LVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLD------EAHQLIRNMPMEANA 483
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ A Q E++P + + + + Y N +++ A ++ M
Sbjct: 484 IVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSM 543
Query: 243 QQEKV-KPNSASFVAVLSACGHAGHVDK----ALQIFTMMDD--------------DFGL 283
++++ KP S++ V DK + +I+ +D+ DF L
Sbjct: 544 NEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVL 603
Query: 284 ----KPKQEHF-GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH-----LN 333
+ ++EHF GC S +L A LI P + V +L CH ++
Sbjct: 604 FDIEEEEKEHFLGC------HSEKLAIAFGLISATPTAVIRVVKNLRVCGDCHMAIKLIS 657
Query: 334 SDLGEEMAMK 343
S G E+ ++
Sbjct: 658 SITGREITVR 667
>gi|225423493|ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 536
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 215/388 (55%), Gaps = 13/388 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ ACA L G HG ++K+ D +G L+ MY G + A +
Sbjct: 103 PDNYTLPYVLKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCI 162
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ ++W MI+G G E A LF+ E D W S+ISG+ Q
Sbjct: 163 FDEMPW-HTAVSWTVMISGYAKVGDVETARMLFD----EAPMKDRGIWGSIISGYVQNNC 217
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E ++F MQSTG+ P + S+L ACA L A+++G H ++ + ++T
Sbjct: 218 FKEGLQMFRLMQSTGLEPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTG 277
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A++ FD + D WNAMISG NG+ ++A+ +F M++ VK
Sbjct: 278 LIDMYAKCGSLDIAKKLFDGMSQR--DTICWNAMISGMAMNGDGDNALRLFSEMEKAGVK 335
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+A+ +AC ++G +A+++ M + ++PK EH+GC+VDLLGR+G L EA+E
Sbjct: 336 PDDITFIAIFTACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKE 395
Query: 309 LIRELPE---PT--VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
LI ++P PT + +LL AC H +++ E+ A +L +E + +V+LSN+YA
Sbjct: 396 LILKMPNSSSPTEQAIAWRALLSACCSHGQTEVAEDAAQRLFHLE-HHSGAYVLLSNLYA 454
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
G+ + V RIR+M+ +R + K PG S+
Sbjct: 455 AAGKQDHVRRIRKMMENRGVDKAPGCSS 482
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 123/294 (41%), Gaps = 37/294 (12%)
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
L+G A +LF+ + H P N+MI F G +++ +M G+ P
Sbjct: 51 LHGSLPHAWKLFQQIQH----PTICICNTMIKAFVLKGKLINTIQIYSQMLENGLYPDNY 106
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ- 208
+ VL ACA L + LG+ HG ++ D + LI+MY G AR FD+
Sbjct: 107 TLPYVLKACAGLQSCHLGESAHGQSVKLGFWFDIFVGNTLIAMYSSFGNVRAARCIFDEM 166
Query: 209 ---------------------------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFD 240
F+ P D W ++ISGY +N ++ +++F
Sbjct: 167 PWHTAVSWTVMISGYAKVGDVETARMLFDEAPMKDRGIWGSIISGYVQNNCFKEGLQMFR 226
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
LMQ ++P+ A V++L AC H G ++ + + + D G ++D+ +
Sbjct: 227 LMQSTGLEPDEAILVSILCACAHLGAMEIGVWVHRYL-DQLGHPLSVRLSTGLIDMYAKC 285
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G LD A++L + + +++++ +N D G+ EME P
Sbjct: 286 GSLDIAKKLFDGMSQRDTICWNAMISG--MAMNGD-GDNALRLFSEMEKAGVKP 336
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +S++ ACA L ++ G VH ++ + T L+DMY KCG L A
Sbjct: 234 EPDEAILVSILCACAHLGAMEIGVWVHRYLDQLGHPLSVRLSTGLIDMYAKCGSLDIAKK 293
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+ + WN MI+GM +NG + A+ LF + G KPD T+ ++ + S G
Sbjct: 294 LFDGMS-QRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIFTACSYSG 352
Query: 128 MRFEAFKLFEKM 139
M EA +L M
Sbjct: 353 MAHEAIRLLNSM 364
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 217/388 (55%), Gaps = 12/388 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + T +S +SAC+ L + G ++H + E + T IG AL+DMY KCGC+ A
Sbjct: 213 KADEATVVSTLSACSVLRNQEVGEEIHRY-VDAELEMTTKIGNALLDMYCKCGCVDKARA 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ G++N++ W +M++G NG ++A ELFE D W +MI+G+ Q
Sbjct: 272 IFDEM-GNKNVICWTSMVSGYASNGSLDEARELFE----RSPVRDIVLWTAMINGYVQFN 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF KMQ + P + ++L CA AL+ GK HG++ + D + T
Sbjct: 327 LFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGT 386
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG A F +E+K D A W ++I G NG A++ F M++
Sbjct: 387 ALVDVYAKCGCVEKALEVF--YEMKERDTASWTSVIYGLAVNGMTSKALDFFSQMEEAGF 444
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ VL+AC H G V++ + F M + ++PK EH+ C++DLL R+G LDEA
Sbjct: 445 RPDDITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAE 504
Query: 308 ELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
L+ +P + V +Y SLL AC + N + E + +L+ +E ++ + +L+++YA
Sbjct: 505 LLLEMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYA 564
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
RWEDV +R+ + + + K PG S+
Sbjct: 565 SANRWEDVTTVRRKMKELGIRKFPGCSS 592
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 9/221 (4%)
Query: 108 GFKPDP--ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
GF P +N MI ++ + LF +++ G+ P + V A L +
Sbjct: 74 GFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFKAMGCLGKVV 133
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G++ HG+V+++ D + +++ MY G+ A++ FD EI D WN +IS
Sbjct: 134 EGEKVHGYVVKSGF--DACVCNSVMGMYGALGKMEVAKKVFD--EIPERDVVSWNVLISS 189
Query: 226 YGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
Y + ++E A+ +F M++E +K + A+ V+ LSAC + + +I +D + +
Sbjct: 190 YVGHRKFEDAIAVFRRMRRESNLKADEATVVSTLSACSVLRNQEVGEEIHRYVDAELEMT 249
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
K + ++D+ + G +D+AR + E+ V + S++
Sbjct: 250 TKIGN--ALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMV 288
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 210/382 (54%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF SV++AC ++ LQ G+QVH ++ + + + + +ALVDMY KC + A VF
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVF 333
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ +N+++W M+ G+ Q G
Sbjct: 334 KKMT-CKNVVSWTAMLV-----------------------------------GYGQNGYS 357
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA K F MQ G+ P + SV+S+CA+L++L+ G + H + + L +++ AL
Sbjct: 358 EEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNAL 417
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+++Y KCG + R F++ K D W A++SGY + G+ + +F+ M +KP
Sbjct: 418 VTLYGKCGSIEDSHRLFNEISFK--DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKP 475
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VLSAC AG V+K QIF M ++ G+ P Q+H+ CM+DL R+GR++EAR
Sbjct: 476 DKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNF 535
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I ++P P + +LL +C + N D+G+ A L E++P N +V+LS++YA G+W
Sbjct: 536 INKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKW 595
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E+V R+R+ + D+ L K PG S
Sbjct: 596 EEVARLRKDMRDKGLRKEPGCS 617
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 10/352 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +TF +++ + ++ GRQ+HG +K S +G+ LVDMY K G + CA VF
Sbjct: 142 NRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVF 201
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
EL +N++ +NT+I G+M GR E + LF E + D +W SMI+GF+Q G+
Sbjct: 202 DELP-EKNVVMYNTLIMGLMRCGRVEDSKRLF----FEMRERDSISWTSMITGFTQNGLD 256
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+A +F +M+ + SVL+AC + AL+ GK+ H ++IR D + +A+AL
Sbjct: 257 RDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASAL 316
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC A F + K + W AM+ GYG+NG E AV+ F MQ+ ++P
Sbjct: 317 VDMYCKCKNIKSAEAVFKKMTCK--NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEP 374
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V+S+C + +++ Q F GL +V L G+ G ++++ L
Sbjct: 375 DDFTLGSVISSCANLASLEEGAQ-FHARALTSGLISFITVSNALVTLYGKCGSIEDSHRL 433
Query: 310 IRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
E+ + +L+ A + N +G +M ++P+ T +LS
Sbjct: 434 FNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLS 485
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 36/280 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
+ +++ C + +H +K +T + L+ Y K G +P A VF ++
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
N+ +WNT+++ GR + LF+ + + D +WNS+ISG++ G+ +++
Sbjct: 72 HP-NLYSWNTILSAYSKLGRVSEMEYLFDAMP----RRDGVSWNSLISGYAGCGLIYQSV 126
Query: 134 KLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
K + M +L +T ++L + +KLG++ HGHV++ + + L+
Sbjct: 127 KAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVD 186
Query: 192 MYMKCGQPSWARRFFDQ-----------------------------FEIKPDDPAFWNAM 222
MY K G S AR+ FD+ FE++ D W +M
Sbjct: 187 MYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSM 246
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
I+G+ +NG A++IF M+ E ++ + +F +VL+ACG
Sbjct: 247 ITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACG 286
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 116/248 (46%), Gaps = 16/248 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T SVIS+CA+L L+ G Q H L S + ALV +Y KCG + +H
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ ++ +TW +++G G++ + + LFE + G KPD T+ ++S S+ G
Sbjct: 433 LFNEI-SFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAG 491
Query: 128 MRFEAFKLFEKM-QSTGMVP---SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + ++FE M G+VP C+ + S + +E + + + D
Sbjct: 492 LVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRI------EEARNFINKMPFSPDA 545
Query: 184 -SMATALIS--MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
S AT L S Y WA F E+ P + A + + S Y G++E +
Sbjct: 546 ISWATLLSSCRFYGNMDIGKWAAEFL--MELDPHNTASYVLLSSVYAAKGKWEEVARLRK 603
Query: 241 LMQQEKVK 248
M+ + ++
Sbjct: 604 DMRDKGLR 611
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 83/208 (39%), Gaps = 40/208 (19%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
++L C + K H H+I+ + + LIS Y K G +A + FDQ
Sbjct: 14 ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQM--- 70
Query: 213 PDDPAF-WNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKA 270
P + WN ++S Y + G +FD M +++ V N S ++ + CG KA
Sbjct: 71 PHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWN--SLISGYAGCGLIYQSVKA 128
Query: 271 LQIFTMMDDDFGLKP-------------------KQEH-----FGCM---------VDLL 297
+ D F L +Q H FG M VD+
Sbjct: 129 YNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMY 188
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLL 325
+ G + AR++ ELPE V +Y++L+
Sbjct: 189 SKMGMISCARKVFDELPEKNVVMYNTLI 216
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 223/417 (53%), Gaps = 38/417 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT +++S A + G++V ++ +SD ++ + VDMY KCG + A VF
Sbjct: 330 DCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVF 389
Query: 70 QE--------------------LKGSR--------------NILTWNTMIAGMMLNGRSE 95
L G N++TWN +I ++ NG+ +
Sbjct: 390 DSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVD 449
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A ++F + G P +W +M++G Q G EA KMQ GM P++ +T L
Sbjct: 450 EAKKMFLQMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVAL 509
Query: 156 SACADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPD 214
SACA+L++L G+ HG++IR L+ S+ T+L+ MY KCG S A + F + ++ +
Sbjct: 510 SACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRR-KLFSE 568
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
P +NAMIS Y G E A+ ++ + +KP++ +F +LSAC HAG +++A++IF
Sbjct: 569 LP-LYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIF 627
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+ M G+KP EH+G MVDLL +G ++A L+ E+P EP + SLL C
Sbjct: 628 SDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATCNKEHK 687
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L E ++ +L E EP+N +V +SN YA G W++V ++R+M+ + L K PG S
Sbjct: 688 TELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPGCS 744
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 164/366 (44%), Gaps = 54/366 (14%)
Query: 3 ECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
E L DE P++ +V AC +L + FGR VHG K + ++L DMY KCG
Sbjct: 119 EMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCG 178
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF E+ RN++ WN +++
Sbjct: 179 VLDDARKVFDEIP-ERNVVAWN-----------------------------------ALM 202
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q GM EA +L M+ G+ P+ V++ LSA A++ ++ GK++H + L
Sbjct: 203 VGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLE 262
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + T++++ Y K G +A FD+ K D WN +ISGY + G E A+ +
Sbjct: 263 LDNILGTSVLNFYCKVGLVEYAEMVFDRMVGK--DVVTWNLLISGYVQQGLVEDAIRMCK 320
Query: 241 LMQQEKVKPNSASFVAVLSACGHA--GHVDKALQIFTM---MDDDFGLKPKQEHFGCMVD 295
LM+ EK+K + + ++S + K +Q + + + D L VD
Sbjct: 321 LMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTA------VD 374
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ + G + +A+++ + + ++++LL A + S L E EM+ E+ P
Sbjct: 375 MYAKCGSIVDAKKVFDSTVQKDLILWNTLLAA---YAESGLSGEALRLFYEMQLESVPPN 431
Query: 356 VILSNI 361
VI N+
Sbjct: 432 VITWNL 437
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+Q H L + + D ++GT++++ Y K G + A
Sbjct: 227 EPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEM 286
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + G ++++TWN +I+G + G E A+ + + + E K D T
Sbjct: 287 VFDRMVG-KDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVT------------ 333
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++++S A KLGKE + IR D +A+
Sbjct: 334 -----------------------LSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLAS 370
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY KCG A++ FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 371 TAVDMYAKCGSIVDAKKVFDSTVQK--DLILWNTLLAAYAESGLSGEALRLFYEMQLESV 428
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++ ++ + G VD+A ++F M G+ P + M++ L ++G +EA
Sbjct: 429 PPNVITWNLIILSLLRNGQVDEAKKMFLQMQSS-GIVPTIVSWTTMMNGLVQNGCSEEAI 487
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKL--QEMEPENPTPFVILSNI 361
+R++ E P V L AC + G + + + + + L ++
Sbjct: 488 HYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDM 547
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G D+ + ++ + ++LP +A I+
Sbjct: 548 YAKCG---DISKAEKVFRRKLFSELPLYNAMIS 577
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 119/247 (48%), Gaps = 15/247 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN + +SACA+L L FGR VHG ++ S ++ I T+LVDMY KCG + A
Sbjct: 500 PNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEK 559
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ K + +N MI+ L G E+AM L+ L G KPD T+ +++S + G
Sbjct: 560 VFRR-KLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAG 618
Query: 128 MRFEAFKLFEKMQST-GMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+A ++F M S G+ P L+ V + SA AL+L +E D
Sbjct: 619 DINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEM-------PYEPD 671
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +L++ K + Q E +PD+ + + + Y G ++ V++ ++
Sbjct: 672 ARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREM 731
Query: 242 MQQEKVK 248
M+ + +K
Sbjct: 732 MKAKGLK 738
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 121/288 (42%), Gaps = 45/288 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C G+Q+H LK + I T LV Y KC L A +F +L+
Sbjct: 32 ILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSKLR- 90
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W +I G K ++G+ A
Sbjct: 91 VRNVFSWAAII----------------------GVK-------------CRMGLVEGALM 115
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M + P V +V AC L G+ HG+V ++ L+ +A++L MY
Sbjct: 116 GFVEMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYG 175
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG AR+ FD EI + WNA++ GY +NG E A+ + M++E V+P +
Sbjct: 176 KCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTV 233
Query: 255 VAVLSACGHAGHVDK-----ALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LSA + G V++ AL + ++ D L +F C V L+
Sbjct: 234 STCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLV 281
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 95/232 (40%), Gaps = 20/232 (8%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--LNKDESMATA 188
EA L +M + + +L C G++ H +++ K+E + T
Sbjct: 9 EALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIETK 68
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ Y KC A F + ++ + W A+I R G E A+ F M ++++
Sbjct: 69 LVIFYAKCDALEIAEVLFSKLRVR--NVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIF 126
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC------MVDLLGRSGR 302
P++ V ACG ALQ G K C + D+ G+ G
Sbjct: 127 PDNFVVPNVCKACG-------ALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGV 179
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
LD+AR++ E+PE V +++L+ ++ + + EE + +M E P
Sbjct: 180 LDDARKVFDEIPERNVVAWNALMVG---YVQNGMNEEAIRLMCDMREEGVEP 228
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 216/390 (55%), Gaps = 9/390 (2%)
Query: 5 LSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
LSD EP+ VT I ++SACA L L FGR +H L + + AL+DMY KCG +
Sbjct: 229 LSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDI 288
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF L R +WN MI G G + A LF+ + D T+NS+I+G
Sbjct: 289 GRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDR----DLVTFNSLITG 344
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ G EA LF +M+ + + S+L+ACA L AL G+ H + + + D
Sbjct: 345 YIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVD 404
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TAL+ MY+KCG+ A F ++ D W+AMI+G NG ++A+E F M
Sbjct: 405 IYLGTALLDMYLKCGRVEEASLVFQAMSVR--DVHTWSAMIAGLAFNGMGKAALEYFFWM 462
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ + +PNS +++A+L+AC H+ +D+ F M ++P EH+GCM+DLLGRSG
Sbjct: 463 KVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGL 522
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LDEA +L+R +P +P ++ S+L AC H +++L A L ++EP+ +V L NI
Sbjct: 523 LDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQLYNI 582
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
Y +WED +IR+++ +R + K G S+
Sbjct: 583 YIDSRQWEDASQIRRLMEERGVKKAAGYSS 612
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 109/231 (47%), Gaps = 10/231 (4%)
Query: 47 MIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
++ ++ MY++ G A F ++ ++ + W T+I+G+ G + A L L H
Sbjct: 141 LVSNPIIHMYVELGLAGDARRAFDDIP-VKDAVAWTTVISGLAKLGLLDDAWCL---LRH 196
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+ + +W +ISG+S+ G EA F M S G+ P V +LSACA L L
Sbjct: 197 SPAR-NVISWTGLISGYSRAGRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVF 255
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H V + + ALI MY KCG A FD + P WNAMI GY
Sbjct: 256 GRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIGRAWEVFDALG-RGRRPQSWNAMIDGY 314
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ G + A +FD M+ + +F ++++ H G + +AL +F M
Sbjct: 315 CKLGHVDVARYLFDQMEDRDL----VTFNSLITGYIHGGRLREALLLFMQM 361
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 217/386 (56%), Gaps = 12/386 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKI--EKQSDTM--IGTALVDMYLKCGCLPCA 65
+ TF SVIS CA+ + G+++H LK D + AL+ Y KCG + A
Sbjct: 288 DEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIA 347
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F ++ R++++WN +++G + + + M+ + +E + + +W MISG +Q
Sbjct: 348 QEIFNKMP-ERDLVSWNIILSGYV----NVRCMDEAKSFFNEMPEKNILSWIIMISGLAQ 402
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+G EA K F +M+ G P + +C+ L +LK G++ H V+R S
Sbjct: 403 IGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSA 462
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI+MY +CG A F + D WNAMI+ G++G+ A+E+F+ M +E
Sbjct: 463 GNALITMYARCGVVDAAHCLF--INMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKE 520
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ P+ SF+ V+SAC HAG V + + F M + +G+ P +EH+ ++DLL R+G+ E
Sbjct: 521 GILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSE 580
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A+E++ +P EP ++ +LL C H N DLG E A +L E++P++ +V+LSN+YA
Sbjct: 581 AKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSNMYAV 640
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G+W D+ ++R+++ DR + K PG S
Sbjct: 641 AGQWNDMAKVRKLMRDRGVKKEPGCS 666
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 157/336 (46%), Gaps = 30/336 (8%)
Query: 8 EPNSVTFISVISACASLLYLQ-FGRQVHGLTLKIEKQSDTMIGTALVDMYLKC------- 59
P++ TF SV+ A A + + +Q+H +K T + AL+ Y+KC
Sbjct: 144 RPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQ 203
Query: 60 --GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ A +F E+ +R+ L+W T+I G + N + A E G + K WN
Sbjct: 204 SSSLMAEARKLFDEMP-NRDELSWTTIITGYVKNNDLDAAKEFLNGTS----KKLGVAWN 258
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MISG++ G+ EAF++F KM + + TSV+S CA+ +LGKE H + ++
Sbjct: 259 AMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKT 318
Query: 178 DLNKDESMA----TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
N +A ALI+ Y KCG+ A+ F++ + D WN ++SGY +
Sbjct: 319 VANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNK--MPERDLVSWNIILSGYVNVRCMD 376
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A F+ M ++ N S++ ++S G ++AL+ F M G +P F
Sbjct: 377 EAKSFFNEMPEK----NILSWIIMISGLAQIGFAEEALKFFNRMKLQ-GFEPCDYAFAGA 431
Query: 294 VDLLGRSGRLDEAREL----IRELPEPTVSVYHSLL 325
+ G L R+L +R E ++S ++L+
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALI 467
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP F I +C+ L L+ GRQ+H ++ +S G AL+ MY +CG + AH
Sbjct: 422 EPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHC 481
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + ++WN MIA + +G+ +A+ELFE + EG PD ++ ++IS S G
Sbjct: 482 LFINMP-CVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAG 540
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E K F+ M + V N DE
Sbjct: 541 LVKEGRKYFDSMHNVYGV----------------------------------NPDEEHYA 566
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE----YESAVEIFDLMQ 243
+I + + G+ S A+ + +P P W A+++G +G E+A +F+L
Sbjct: 567 RIIDLLCRAGKFSEAKEVMESMPFEPGAP-IWEALLAGCRIHGNIDLGIEAAERLFELKP 625
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
Q + ++V + + AG + ++ +M D
Sbjct: 626 Q-----HDGTYVLLSNMYAVAGQWNDMAKVRKLMRD 656
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 29/345 (8%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELF 101
Q D + T L+ Y G L + +F + G R+ + +N MI N A+ELF
Sbjct: 76 QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA-CAD 160
+ + F+PD T+ S++ L + E K +++ + VTSVL+A +
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGA---LALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISS 192
Query: 161 LSALKLGKETHGHVIRADL--------NKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+ A+ N+DE T +I+ Y+K A+ F + K
Sbjct: 193 YVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKK 252
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKA 270
WNAMISGY G Y A E+F M K++ + +F +V+S C +AG + K
Sbjct: 253 LG--VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKE 310
Query: 271 LQIFTMMD-----DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + + D + ++ + G++D A+E+ ++PE + ++ +L
Sbjct: 311 MHAYFLKTVANPAPDVAMPVNN----ALITFYWKCGKVDIAQEIFNKMPERDLVSWNIIL 366
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++N +E EM +N ++I+ + A +G E+
Sbjct: 367 SG---YVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEE 408
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 35/154 (22%)
Query: 153 SVLSACADLSALK--LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
S+L C S + L + H H+I + + LI +Y K + ++AR FD+
Sbjct: 16 SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75
Query: 211 IKPD--------------------------------DPAFWNAMISGYGRNGEYESAVEI 238
+PD D F+NAMI+ Y N + +A+E+
Sbjct: 76 -QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIEL 134
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
F MQ++ +P++ +F +VL A +K Q
Sbjct: 135 FCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQ 168
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 229/452 (50%), Gaps = 75/452 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN F SVISACASL + G+++H +LK +S + + +L+ MY+KC A +V
Sbjct: 99 PNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSV 158
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD---------------- 112
F N +++N +I G + N + E+ +E F+ + +G PD
Sbjct: 159 FTNTP-EPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTEN 217
Query: 113 -------------------PATWNSMISGFSQLGMRFE---AFKLFEK------------ 138
P N +I+ +S+L + E AF+L E+
Sbjct: 218 LKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAA 277
Query: 139 -----------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ T + P TS L+ACA L+++ GK+ H H++R L +
Sbjct: 278 CSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ 337
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + AL++MY KCG +A F + + + WN +I+G+G +G E AVE+F+
Sbjct: 338 DLGVGNALVNMYAKCGCIGYAYDIFSK--MVHHNLVSWNTIIAGFGNHGLGERAVELFEQ 395
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M ++P+S +F+ +L+AC HAG VDK F M++ +G+ P EHF C++D+LGR+G
Sbjct: 396 MNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAG 455
Query: 302 RLDEARELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
RL+EA E +R+ P +P V V SLL A H + +GE +A L +++P +P+V+L
Sbjct: 456 RLNEAEEYMRKFPFWNDPVVLV--SLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLL 513
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SN+YA G W+ V R+ + L K PG S
Sbjct: 514 SNLYASDGMWDSVAEARKRLKGSGLKKEPGHS 545
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 141/317 (44%), Gaps = 44/317 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T S++ C+ L+ G +H LK QSD + +++MY KCG A VF E+
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
F+ + +W++MISG+ Q G A
Sbjct: 65 ------------------------------------FEKNLVSWSAMISGYDQAGEPQMA 88
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
L+ +M +VP+ SV+SACA LSA+ LG++ H ++ ++ +LISM
Sbjct: 89 IDLYSQM---FLVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISM 145
Query: 193 YMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
YMKC Q S A F P+ + +NA+I+G+ N + E +E F LM+Q+ + P+
Sbjct: 146 YMKCNQCSDALSVFTN---TPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDR 202
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ VL C ++ + ++ L ++ + + EA + R
Sbjct: 203 FAFMGVLGICTTTENLKRGAELHC-QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 312 ELPEPTVSVYHSLLGAC 328
+ E V +++L+ AC
Sbjct: 262 LIEEKDVISWNTLIAAC 278
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M E + P+ TF S ++ACA L + G+Q+H ++ D +G ALV+MY KCG
Sbjct: 294 MTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCG 353
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C+ A+++F ++ N+++WNT+IAG +G E+A+ELFE + G +PD T+ ++
Sbjct: 354 CIGYAYDIFSKMV-HHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLL 412
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK 149
+ + G+ + F M+ T G+ P ++
Sbjct: 413 TACNHAGLVDKGQLYFNSMEETYGIAPDIE 442
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 211/389 (54%), Gaps = 16/389 (4%)
Query: 8 EPNSVTFISVISACASL----LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
+ + VT I V+SAC L + R + +++ D +G LVD + + G L
Sbjct: 185 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEV----DVYLGNTLVDYFGRRGQLQ 240
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF +K RNI+T N MIA A ++F+ + K D +W+SMISG+
Sbjct: 241 SAEKVFFNMK-VRNIVTMNAMIAAYAKGQDIVSARKIFDQIP----KKDLISWSSMISGY 295
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
SQ +A ++F +MQ + P + SV+S+CA L AL LGK H +V R ++ D
Sbjct: 296 SQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADT 355
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
M +LI MYMKCG A + F E+K D WN++I G NG + ++ +F M
Sbjct: 356 IMENSLIDMYMKCGSAKEALQVFK--EMKEKDTLSWNSIIIGLANNGFEKESLNLFQAML 413
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
E +PN +F+ VL AC +A V++ L F M + L+P+ +H+GC+VDLLGR+G+L
Sbjct: 414 TEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQL 473
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
++A I E+P +P V+ LLG+C H + + E + KL E+EP N + +LSN Y
Sbjct: 474 EKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAY 533
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A RW + +RQ + D + K PG SA
Sbjct: 534 ASAHRWSEAMNVRQCMADTDVRKSPGCSA 562
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 12/319 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++TF ++ ACA + L G Q+H K+ SD + +L+ +Y CG L A +V
Sbjct: 85 PDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSV 144
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +++++WN++I G R + + LF+ + +EG K D T ++S ++LG
Sbjct: 145 FDEMV-VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD 203
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT- 187
A + ++ + + +++ L+ ++ ++ K ++ T
Sbjct: 204 YSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM------KVRNIVTM 257
Query: 188 -ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A+I+ Y K AR+ FDQ I D W++MISGY + + A+EIF MQ+ K
Sbjct: 258 NAMIAAYAKGQDIVSARKIFDQ--IPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAK 315
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP++ +V+S+C H G +D + + + +K ++D+ + G EA
Sbjct: 316 VKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRN-NIKADTIMENSLIDMYMKCGSAKEA 374
Query: 307 RELIRELPEPTVSVYHSLL 325
++ +E+ E ++S++
Sbjct: 375 LQVFKEMKEKDTLSWNSII 393
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 104 LAHEGFK----PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
AH+ F P WN +I G +Q +A ++K Q GMVP +L ACA
Sbjct: 39 FAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACA 98
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
++AL G++ H H+ + L D ++ +LI +Y CG +AR FD+ +K D W
Sbjct: 99 RINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK--DVVSW 156
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N++I GY + ++ + +F LMQ E VK + + + V+SAC G A + + +
Sbjct: 157 NSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI-E 215
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
D+ ++ +VD GR G+L A ++ + + ++++ A
Sbjct: 216 DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 263
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/391 (34%), Positives = 210/391 (53%), Gaps = 39/391 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MK + + N T S ++A A++ L+ G+++HG ++ SD ++ +AL DMY KCG
Sbjct: 193 MKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVVWSALSDMYGKCG 252
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A ++F ++ D TW +MI
Sbjct: 253 SIEEARHIFDKM------------------------------------VDRDIVTWTAMI 276
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ Q G R E F LF + +G+ P+ + VL+ACA+ ++ +LGK+ HG++ R +
Sbjct: 277 DRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFD 336
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
A+AL+ MY KCG A R F E D W ++I+GY +NG+ + A+ F+
Sbjct: 337 PFSFAASALVHMYSKCGNMVSAERVFK--ETPQPDLFSWTSLIAGYAQNGQPDEAIRYFE 394
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+ + +P+ +FV VLSAC HAG VDK L F + + +GL +H+ C++DLL RS
Sbjct: 395 LLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARS 454
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G+ DEA +I ++ +P ++ SLLG C H N L + A L E+EPENP +V L+
Sbjct: 455 GQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLA 514
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYA G W +V +IR+ ++DR + K PG+S
Sbjct: 515 NIYATAGMWSEVAKIRKTMDDRGVVKKPGLS 545
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 160/322 (49%), Gaps = 9/322 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D+P++ + ++I +C LQ G++VH I L++MY KC L +
Sbjct: 66 DKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQ 125
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+ R++ +WN +I+G G ++A LF+ + D +W +MISG+ +
Sbjct: 126 KLFDEMP-ERDLCSWNILISGYAKMGLLQEAKSLFDKMPER----DNFSWTAMISGYVRH 180
Query: 127 GMRFEAFKLFEKMQSTGMVPSLK-CVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
EA +LF M+ + S K V+S L+A A + L++GKE HG+++R L+ DE +
Sbjct: 181 DRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDSDEVV 240
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+AL MY KCG AR FD+ + D W AMI Y ++G + ++F + +
Sbjct: 241 WSALSDMYGKCGSIEEARHIFDKMVDR--DIVTWTAMIDRYFQDGRRKEGFDLFADLLRS 298
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++PN +F VL+AC + + ++ M G P +V + + G +
Sbjct: 299 GIRPNEFTFSGVLNACANQTSEELGKKVHGYM-TRVGFDPFSFAASALVHMYSKCGNMVS 357
Query: 306 ARELIRELPEPTVSVYHSLLGA 327
A + +E P+P + + SL+
Sbjct: 358 AERVFKETPQPDLFSWTSLIAG 379
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 102/229 (44%), Gaps = 20/229 (8%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ H+ KP + ++++I + + + K+ + ++ +G VP L + +L A +
Sbjct: 61 ILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDS 120
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAM 222
L ++ + DL LIS Y K G A+ FD+ P+ F W AM
Sbjct: 121 LMDSQKLFDEMPERDL----CSWNILISGYAKMGLLQEAKSLFDKM---PERDNFSWTAM 173
Query: 223 ISGYGRNGEYESAVEIFDLMQQ------EKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
ISGY R+ A+E+F +M++ K +SA A C G K + + M
Sbjct: 174 ISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIG---KEIHGYIM 230
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL + + + D+ G+ G ++EAR + ++ + + + +++
Sbjct: 231 RT---GLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMI 276
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 223/390 (57%), Gaps = 11/390 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGC 61
L P+SVT +++I CASLL ++ +++HG +++ + + +G A++D Y KCG
Sbjct: 444 LDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGN 503
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A+ +FQ L RN++T N++I+G + G A +F G++ + D TWN M+
Sbjct: 504 IEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMS----ETDLTTWNLMVR 559
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+++ +A +LF K+Q+ GM P + + S++ C ++++ L ++ HG++IR+ +
Sbjct: 560 VYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSF-E 618
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + L+ Y KCG +A + F K D + AMI GY +G E A+E F
Sbjct: 619 DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDK--DLVMFTAMIGGYAMHGMSEKALETFSH 676
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M +KP+ F ++LSAC HAG + + L+IF ++ G+KP E F C+VDLL R G
Sbjct: 677 MLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGG 736
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+ EA + ++P E +++ +LLGAC + +LG +A KL ++E + +++LSN
Sbjct: 737 HVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSN 796
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA RW+ V +R+M+ ++ L K G S
Sbjct: 797 LYAADDRWDGVMEVRKMMRNKDLKKPAGCS 826
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 148/324 (45%), Gaps = 42/324 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+SVT +V+ CA L G+ VHG +K + DT G ALV MY KCG + C
Sbjct: 138 PSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVAC---- 193
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
A +F+ + H+ D +WN+MI+G ++ G+
Sbjct: 194 ---------------------------DAYAVFDSIIHK----DVVSWNAMIAGLAENGL 222
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS---ALKLGKETHGHVIR-ADLNKDES 184
EAF LF M + P+ V ++L CA A + G++ H +V++ +L+ D S
Sbjct: 223 LKEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVS 282
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQ 243
+ AL+S Y+K G+ A F + + D WN +I+GY NGE+ ++ +F +L+
Sbjct: 283 VCNALLSFYLKVGRTKEAESLF--WAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVS 340
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
E + +S + V++L AC ++ Q+ + L +V + G +
Sbjct: 341 LEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYI 400
Query: 304 DEARELIRELPEPTVSVYHSLLGA 327
+EA + + ++S+L A
Sbjct: 401 EEAYHTFSMISRKDLISWNSILDA 424
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 119/267 (44%), Gaps = 45/267 (16%)
Query: 3 ECLSD----EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLK 58
CL D +P+ +++ +C++LL G+ +H +K S + AL++MY K
Sbjct: 25 HCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAK 84
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
CG L H +F + GR DP WN
Sbjct: 85 CGMLDDCHKLFDQF-------------------GRC-----------------DPVIWNI 108
Query: 119 MISGFSQLGMR-FEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIR 176
++SG+S+ G + K+F M S+G V PS + +VL CA L GK HG+VI+
Sbjct: 109 VLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIK 168
Query: 177 ADLNKDESMATALISMYMKCGQPSW-ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D AL+SMY KCG + A FD I D WNAMI+G NG + A
Sbjct: 169 SGFEMDTFAGNALVSMYAKCGLVACDAYAVFDS--IIHKDVVSWNAMIAGLAENGLLKEA 226
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACG 262
+F LM + VKPN A+ +L C
Sbjct: 227 FSLFSLMMKGSVKPNYATVANILPVCA 253
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 46/365 (12%)
Query: 6 SDEPNSVTFISVISACASL---LYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGC 61
S +PN T +++ CAS + + GRQ+H L+ E +D + AL+ YLK G
Sbjct: 237 SVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGR 296
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A ++F + +R++++WNT+IAG LNG K++ +F L
Sbjct: 297 TKEAESLFWAMD-ARDLVSWNTIIAGYALNGEWLKSLHVFGNLV---------------- 339
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LN 180
L M + S MV S+L ACA L L+ GK+ H +++R L
Sbjct: 340 ---SLEMLL--------LDSVTMV-------SILPACAQLDNLQAGKQVHAYILRHPFLF 381
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D S AL+S Y KCG A F I D WN+++ +G + + +
Sbjct: 382 EDTSAGNALVSFYAKCGYIEEAYHTFSM--ISRKDLISWNSILDAFGEKRHHSRFLSLLH 439
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVDLLG 298
+M + ++P+S + + ++ C V K +I +++ ++D
Sbjct: 440 VMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYS 499
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+ G ++ A ++ + L E V + L + + L S M M + T + ++
Sbjct: 500 KCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMI--FSGMSETDLTTWNLM 557
Query: 359 SNIYA 363
+YA
Sbjct: 558 VRVYA 562
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
TW S I EA F S P + + ++L +C+ L A LGK H
Sbjct: 2 TWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHS 61
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+V++ + AL++MY KCG + FDQF DP WN ++SGY R+G+
Sbjct: 62 YVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQF--GRCDPVIWNIVLSGYSRSGKN 119
Query: 233 ESAV-EIFDLMQQE-KVKPNSASFVAVLSACGHAGHVD 268
++ V ++F M +V P+S + VL C +G+++
Sbjct: 120 DADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLN 157
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 215/385 (55%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + V + +I AC SL +FG VHG ++ E D ++ T+L+DMY K
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAK--------- 232
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
NG+ E A +FEG+ ++ +W ++ISGF+Q G
Sbjct: 233 -----------------------NGKLELASRVFEGIPYKSV----ISWGALISGFAQNG 265
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +MQ++G P L + S LSACA + LK+GK HGH+++ L D+ T
Sbjct: 266 FANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSLHGHIVKR-LYLDKVSGT 324
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG ++AR FDQ E P D WNAMIS YG +G+ A+ +F M++ +
Sbjct: 325 ALIDMYAKCGALTFARALFDQIE--PRDLILWNAMISSYGIHGDGIEALSLFLKMKETNI 382
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ A+F ++LSAC H+G V++ F ++ D ++P ++H+ CMVDLL R+G+++EA
Sbjct: 383 TPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAY 442
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI + +P ++++ +LL C H N +GE +A K+ E P++ +V++SN ++
Sbjct: 443 QLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKILESNPDDLGIYVLVSNFFSMAK 502
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
+W+D R+++ + + K+PG SA
Sbjct: 503 KWDDAAVFRKIMKNTGMRKVPGYSA 527
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 151/349 (43%), Gaps = 47/349 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S TF + AC+SL+ L G + + D + ++++++Y K G + A
Sbjct: 81 KPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVVSSVLNLYAKSGKMDKAKI 140
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ K D +W +MI+GF+Q G
Sbjct: 141 VFDKM------------------------------------VKRDVVSWTTMITGFAQSG 164
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++ MQ + ++ AC L K G HGH++R ++N D + T
Sbjct: 165 RPLDAIDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQT 224
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K G+ A R F+ K W A+ISG+ +NG + MQ
Sbjct: 225 SLIDMYAKNGKLELASRVFEGIPYKS--VISWGALISGFAQNGFANKTLASLVEMQNSGF 282
Query: 248 KPNSASFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ S ++ LSAC G+ V K+L + L + ++D+ + G L
Sbjct: 283 KPDLVSLISSLSACAQVGNLKVGKSLHGHIVKR----LYLDKVSGTALIDMYAKCGALTF 338
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
AR L ++ + ++++++ + H D E +++ L+ M+ N TP
Sbjct: 339 ARALFDQIEPRDLILWNAMISSYGIH--GDGIEALSLFLK-MKETNITP 384
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 101/211 (47%), Gaps = 5/211 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WNSMI +S+ E L+ +M S G+ P T L AC+ L L +G+ +
Sbjct: 52 WNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAV 111
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
D + ++++++Y K G+ A+ FD+ + D W MI+G+ ++G A
Sbjct: 112 DFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKR--DVVSWTTMITGFAQSGRPLDA 169
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMV 294
++I+ MQ+E+ + + V ++ AC G L + M+ + + + ++
Sbjct: 170 IDIYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQ--TSLI 227
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D+ ++G+L+ A + +P +V + +L+
Sbjct: 228 DMYAKNGKLELASRVFEGIPYKSVISWGALI 258
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 205/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT SV+ ACA L L GR++H +K+ D ++G L+ MY KCG +
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVI----- 363
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A+ F+ + D ++++++SG Q G
Sbjct: 364 ---------------------------DDAIRFFDXMN----PKDSVSFSAIVSGCVQNG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +F MQ +G+ P L + VL AC+ L+AL+ G +HG++I D +
Sbjct: 393 NAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICN 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ S+AR F++ + D WNAMI GYG +G A+ +F + +
Sbjct: 453 ALIDMYSKCGKISFAREVFNRMD--RHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGL 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F+ +LS+C H+G V + F M DF + P+ EH CMVD+LGR+G +DEA
Sbjct: 511 KPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAH 570
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
IR +P EP V ++ +LL AC H N +LGEE++ K+Q + PE+ FV+LSNIY+ G
Sbjct: 571 HFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAG 630
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D IR D L K+PG S
Sbjct: 631 RWDDAAHIRITQKDWGLKKIPGCS 654
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 40/318 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T + V+ L G+ +HG ++ + ++GT L+DMY KC CL A +
Sbjct: 208 PNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKI 267
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ G RN +W++MI G+
Sbjct: 268 F-DVMGVRN-----------------------------------EVSWSAMIGGYVXSDC 291
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF++M M P+ + SVL ACA L+ L G++ H ++I+ D +
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGN 351
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+SMY KCG A RFFD + P D ++A++SG +NG A+ IF +MQ +
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDX--MNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGI 409
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + + VL AC H + + G ++D+ + G++ AR
Sbjct: 410 DPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR-GFATDTLICNALIDMYSKCGKISFAR 468
Query: 308 ELIRELPEPTVSVYHSLL 325
E+ + + +++++
Sbjct: 469 EVFNRMDRHDIVSWNAMI 486
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 44/358 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN T+ V+ AC+ LL ++ G ++H +SD + TALVD Y KCG L
Sbjct: 103 LGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILV- 161
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+A LF ++H D WN+MI+G S
Sbjct: 162 -------------------------------EAQRLFSSMSHR----DVVAWNAMIAGCS 186
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G+ +A +L +MQ G+ P+ + VL + AL GK HG+ +R +
Sbjct: 187 LYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVV 246
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD-LMQ 243
+ T L+ MY KC +AR+ FD ++ + W+AMI GY + + A+E+FD ++
Sbjct: 247 VGTGLLDMYAKCQCLLYARKIFDVMGVR--NEVSWSAMIGGYVXSDCMKEALELFDQMIL 304
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
++ + P + +VL AC + + ++ + G ++ + + G +
Sbjct: 305 KDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYI-IKLGXVLDILLGNTLLSMYAKCGVI 363
Query: 304 DEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVIL 358
D+A + P+ +VS + +++ C + N+ + + M+L ++P+ T +L
Sbjct: 364 DDAIRFFDXMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVL 420
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 155/374 (41%), Gaps = 58/374 (15%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ ++ AC L +++H LK +D+ + L +YL C + A +F E+
Sbjct: 10 NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGMRF 130
P+P+ WN +I ++ G
Sbjct: 70 --------------------------------------PNPSVILWNQIIRAYAWNGPFD 91
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A L+ M G+ P+ VL AC+ L A++ G E H H L D + TAL+
Sbjct: 92 GAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALV 151
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
Y KCG A+R F + D WNAMI+G G + AV++ MQ+E + PN
Sbjct: 152 DFYAKCGILVEAQRLFSSMSHR--DVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPN 209
Query: 251 SASFVAVLSACGHA---GHVDKALQIFTMMDD-DFGLKPKQEHFGCMVDLLGRSGRLDEA 306
S++ V VL G A GH KAL + + D G+ ++D+ + L A
Sbjct: 210 SSTIVGVLPTVGEAKALGH-GKALHGYCVRRSFDNGVVVGTG----LLDMYAKCQCLLYA 264
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM---EPENPTPFVILSNIYA 363
R++ + + +++G ++ SD +E +M + +PTP V L ++
Sbjct: 265 RKIFDVMGVRNEVSWSAMIGG---YVXSDCMKEALELFDQMILKDAMDPTP-VTLGSVLR 320
Query: 364 GLGRWEDVGRIRQM 377
+ D+ R R++
Sbjct: 321 ACAKLTDLSRGRKL 334
>gi|224116552|ref|XP_002331925.1| predicted protein [Populus trichocarpa]
gi|222874597|gb|EEF11728.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 225/385 (58%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S + + +SAC L G+ VHG+ + + +++++G AL+DMY + G + A
Sbjct: 99 RPDSHSVVGALSACGKKQDLLNGKLVHGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQL 158
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+++ G +++ +W +++ G ++ E A +F+ + ++ D A W +MI+G+ + G
Sbjct: 159 VFKQM-GIKDVSSWTSLLNGFVMCNGLESARRVFDEMP---WRNDVA-WTAMITGYVRGG 213
Query: 128 MRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
M ++F +M++ G P++ +VLS CADL A G+ HG++ + +L+K +++
Sbjct: 214 MPIRGLEMFRQMKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVS 273
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY K G A + FD+ K D W MIS + +G+ A+E+F M +
Sbjct: 274 NALMDMYSKGGCVESAMKIFDRLVKK--DVFSWTTMISAHSSHGKGNHALEVFYDMLESG 331
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN +F+ VLS C H+G + +A ++F M +G +PK EH+GCMVDLL R+G L+EA
Sbjct: 332 VIPNDVTFLLVLSGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEA 391
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ELI +P +P ++ SLL AC N L E K+ E+EP + +V+LSNIY
Sbjct: 392 KELIDNMPMDPDAVIWRSLLSACMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVA 451
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
R +D ++R+M+ D+++ K P S
Sbjct: 452 NRMKDARKMRKMMGDQKVMKKPACS 476
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MK ++P +T ++V+S CA L G+ VHG K+ + AL+DMY K G
Sbjct: 225 MKAEGENQPTVITAVAVLSGCADLGAHDHGQAVHGYISKVNLDKGVTVSNALMDMYSKGG 284
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
C+ A +F L +++ +W TMI+ +G+ A+E+F + G P+ T+ ++
Sbjct: 285 CVESAMKIFDRLV-KKDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVL 343
Query: 121 SGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
SG S G+ EA KLF M Q G P ++ ++ L+ KE + +
Sbjct: 344 SGCSHSGLLVEANKLFNGMIQCYGFEPKIEHYGCMVDLLCRAGLLEEAKEL---IDNMPM 400
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ D + +L+S M A + E++P D + + + Y + A ++
Sbjct: 401 DPDAVIWRSLLSACMNQRNLGLAEIAGKKIIELEPHDDGVYVLLSNIYHVANRMKDARKM 460
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+M +KV A L+ H H + A
Sbjct: 461 RKMMGDQKVMKKPACSYIELNGVVHQFHTENA 492
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 43/286 (15%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD T+ S+I+ + + +AF +F K+ + G+ P V LSAC L GK
Sbjct: 65 PDRVTYTSLINLYLSTQLPIKAFSVFSKLVNEGLRPDSHSVVGALSACGKKQDLLNGKLV 124
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQ----------------PSW------------- 201
HG + R L + + ALI MY + G+ SW
Sbjct: 125 HGMIFRFQLGANSIVGNALIDMYCRNGEIKIAQLVFKQMGIKDVSSWTSLLNGFVMCNGL 184
Query: 202 --ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVL 258
ARR FD+ + D W AMI+GY R G +E+F M+ E + +P + VAVL
Sbjct: 185 ESARRVFDEMPWRND--VAWTAMITGYVRGGMPIRGLEMFRQMKAEGENQPTVITAVAVL 242
Query: 259 SACGHAGHVDKALQI---FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
S C G D + + ++ D G+ ++D+ + G ++ A ++ L +
Sbjct: 243 SGCADLGAHDHGQAVHGYISKVNLDKGVTVSN----ALMDMYSKGGCVESAMKIFDRLVK 298
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
V + +++ A H + E+ + E + P + T ++LS
Sbjct: 299 KDVFSWTTMISAHSSHGKGNHALEVFYDMLESGVIPNDVTFLLVLS 344
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 208/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +TF S++ C + L+ G++VH ++ + + +L+ MY KCG L
Sbjct: 247 PNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGL------ 300
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E+A +LF L H D TW +M++G++QLG
Sbjct: 301 --------------------------EEARKLFSDLPHR----DVVTWTAMVTGYAQLGF 330
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ G+ P TSVL++C+ + L+ GK H ++ A N D + +A
Sbjct: 331 HDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSA 390
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY-GRNGEYESAVEIFDLMQQEKV 247
L+SMY KCG A F+Q + + W A+I+G ++G A+E FD M+++ +
Sbjct: 391 LVSMYAKCGSMDDASLVFNQMSER--NVVAWTAIITGCCAQHGRCREALEYFDQMKKQGI 448
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F +VLSAC H G V++ + F M D+G+KP EH+ C VDLLGR+G L+EA
Sbjct: 449 KPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAE 508
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I +P P SV+ +LL AC H + + GE A + +++P++ +V LS+IYA G
Sbjct: 509 NVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAG 568
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
R+ED ++RQ++ R + K PG S
Sbjct: 569 RYEDAEKVRQVMEKRDVVKEPGQS 592
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 39/315 (12%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
S F ++ CA L L+ GR+VH LK Q + + L+ MY KCG L A VF
Sbjct: 47 SDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFD 106
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ RNI++W MI + ++ +A + +E + G KPD T+ S+++ F+
Sbjct: 107 SIR-DRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTN----- 160
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
P L L+LG++ H ++ A L + + T+L+
Sbjct: 161 ---------------PEL---------------LQLGQKVHMEIVEAGLELEPRVGTSLV 190
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY KCG S AR FD+ K + W +I+GY + G+ + A+E+ + MQQ +V PN
Sbjct: 191 GMYAKCGDISKARVIFDRLPEK--NVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPN 248
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F ++L C ++ ++ + G + ++ + + G L+EAR+L
Sbjct: 249 KITFASILQGCTTPAALEHGKKVHRYIIQS-GYGRELWVVNSLITMYCKCGGLEEARKLF 307
Query: 311 RELPEPTVSVYHSLL 325
+LP V + +++
Sbjct: 308 SDLPHRDVVTWTAMV 322
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 15/268 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +TF SV+++C+S +LQ G+++H + D + +ALV MY KCG + A
Sbjct: 347 KPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASL 406
Query: 68 VFQELKGSRNILTWNTMIAGMML-NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ RN++ W +I G +GR +A+E F+ + +G KPD T+ S++S + +
Sbjct: 407 VFNQM-SERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHV 465
Query: 127 GMRFEAFKLFEKMQ----STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E K F M MV C +L L +E ++
Sbjct: 466 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHL------EEAENVILSMPFIPG 519
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
S+ AL+S R + ++ PDD + A+ S Y G YE A ++ +
Sbjct: 520 PSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQV 579
Query: 242 MQQ-EKVKPNSASFVAVLSACGHAGHVD 268
M++ + VK S++ V H HV+
Sbjct: 580 MEKRDVVKEPGQSWIEVDGKV-HVFHVE 606
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 108/242 (44%), Gaps = 4/242 (1%)
Query: 108 GFKPDPATWNSM-ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
GF+ NS +S + G EA + M G +L CA L +L+
Sbjct: 6 GFRKVETLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQ 65
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+E H ++++ + + + L+SMY KCG + ARR FD I+ + W AMI +
Sbjct: 66 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDS--IRDRNIVSWTAMIEAF 123
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ A + ++ M+ KP+ +FV++L+A + + ++ M + GL+ +
Sbjct: 124 VAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVH-MEIVEAGLELE 182
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+V + + G + +AR + LPE V + L+ D+ E+ +Q+
Sbjct: 183 PRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQ 242
Query: 347 ME 348
E
Sbjct: 243 AE 244
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 202/379 (53%), Gaps = 39/379 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + F V+ C L G+Q+H +K+ +S+ +GT LVD Y+KCG + A+
Sbjct: 286 ELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYR 345
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + +P+ +W+++ISGFSQ G
Sbjct: 346 SFGRIS------------------------------------EPNDVSWSALISGFSQSG 369
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ K+F ++S G+V + TSV ACA + L +G + HG I+ L +
Sbjct: 370 RLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGES 429
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+++MY KCG+ +ARR F+ + +PD A W A+ISGY +G A+ F MQ V
Sbjct: 430 AMVTMYSKCGRLDYARRAFESID-EPDAVA-WTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN+ +F+AVL+AC H+G V +A Q M D+G+KP +H+ CM+D R+G L EA
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEAL 547
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI +P EP + SLLG CW H + LG+ A L ++P + +++L N+Y+ G
Sbjct: 548 ELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFG 607
Query: 367 RWEDVGRIRQMINDRQLTK 385
+WE+ G +R+++ +R+L K
Sbjct: 608 KWEEAGHVRKLMAERELKK 626
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 150/372 (40%), Gaps = 75/372 (20%)
Query: 5 LSDEPNSVT---FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
+ D SVT + + AC L L GR +H + K I L+ MY CG
Sbjct: 78 MDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGS 137
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
VF E+ +N+++W +I+ NG EK
Sbjct: 138 XIDVQKVFDEML-MKNLVSWVIVISAYAKNGELEK------------------------- 171
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
A +LF MQ++G+ P+ S+L +C S L+LGK+ H HVIRA LN
Sbjct: 172 ----------AIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNA 221
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ ++ TA+ +MY++CG A+ FD + + + W ++ GY + + E A+E+F
Sbjct: 222 NITVETAICNMYVRCGWLEGAKLVFDGMDAQ--NAVTWTGLMVGYTQAKKLEVALELFAR 279
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD--------------DFGLK--- 284
M E V+ + F VL C D QI + + DF +K
Sbjct: 280 MAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGD 339
Query: 285 -------------PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS----VYHSLLGA 327
P + ++ +SGRL++ ++ L V +Y S+ A
Sbjct: 340 IESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQA 399
Query: 328 CWCHLNSDLGEE 339
C N ++G +
Sbjct: 400 CAAQANLNMGSQ 411
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N + S+ G EA ++M + + + AC L +L G+ H + R
Sbjct: 56 NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
N S+ L+ MY CG ++ FD+ +K + W +IS Y +NGE E A+
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMK--NLVSWVIVISAYAKNGELEKAI 173
Query: 237 EIFDLMQQEKVKPNSASFVAVLSAC 261
+F MQ ++PNSA ++++L +C
Sbjct: 174 RLFSDMQASGIRPNSAVYMSLLQSC 198
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 214/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T +SV+SACA + +L G ++H + +K S ++ +L+DMY KC C+ A V
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEV 457
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + G +N+++ W S+I G
Sbjct: 458 FRNISG-KNVVS-----------------------------------WTSLILGLRINNR 481
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FEA F +M+ + M P+ + SVLSACA + AL GKE H H +R + D + A
Sbjct: 482 SFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA 540
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY++CG+ A +QF + D WN +++GY + G+ + AVE+FD M + ++
Sbjct: 541 ILDMYVRCGRKVPA---LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+++L AC +G V + L+ F +M + + L P +H+ C+VD+LGR+G+LD+A +
Sbjct: 598 PDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYD 657
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+++P P +++ +LL AC H N +LGE A ++ E + ++ +++L N+YAG G
Sbjct: 658 FIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGN 717
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V ++R ++ +R L+ PG S
Sbjct: 718 WDKVSKVRSLMRERGLSADPGCS 740
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF SV+ CA + + G+++H ++ +SD +G AL+ MY+KCG + A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ K D +WN+MISG+ + G
Sbjct: 255 LFDKMP------------------------------------KRDRISWNAMISGYFENG 278
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +LF M+ + P L +T+V SAC L +LG+ HG+V++++ D SM
Sbjct: 279 GGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNN 338
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY G+ A F + E K D W AMI+ + AVE + +M+ E +
Sbjct: 339 SLIQMYSSLGRLEEAETVFSRMESK--DVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V+VLSAC GH+D +++ + GL ++D+ + +D A
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSHVIVSNSLIDMYSKCKCVDNAL 455
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
E+ R + V + SL+ +N+ E + Q E P ++S + A
Sbjct: 456 EVFRNISGKNVVSWTSLILG--LRINNRSFEALLFFRQMKESMKPNSVTLISVLSA 509
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 25/260 (9%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WN ++ G+++ G EA L+ +M + P++ SVL CA +S + GKE H
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
HVIR D + ALI+MY+KCG S AR FD+ + D WNAMISGY NG
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKR--DRISWNAMISGYFENGG 279
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSAC----------GHAGHVDKALQIFTMMDDDF 281
+E+F +M++ V P+ + V SAC G G+V K+ +F
Sbjct: 280 GLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKS---------EF 330
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM- 340
G + ++ + GRL+EA + + V + +++ + H E
Sbjct: 331 GGDISMNN--SLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY 388
Query: 341 -AMKLQEMEPENPTPFVILS 359
M+L+ + P+ T +LS
Sbjct: 389 KMMELEGILPDEITLVSVLS 408
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MKE + +PNSVT ISV+SACA + L G+++H L+ D + A++DMY++CG
Sbjct: 492 MKESM--KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A N F K +++ WN ++ G G+++ A+ELF+ + PD T+ S++
Sbjct: 550 RKVPALNQFNSQK--KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL 161
S+ GM E + F M++ + P+LK CV +L L
Sbjct: 608 CACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQL 652
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/390 (35%), Positives = 226/390 (57%), Gaps = 39/390 (10%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ L EP+ T+ SVISA + G+ +HGL +K + I +L+ MYLK
Sbjct: 295 QVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLK---- 350
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
+H S+++ ++A+ +FE L ++ D +WNS+++G
Sbjct: 351 --SH--------SKSM----------------DEALNIFESLENK----DHVSWNSILTG 380
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
FSQ G+ +A K FE M+S +V ++VL +C+DL+ L+LG++ H V+++ +
Sbjct: 381 FSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPN 440
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDL 241
+A++LI MY KCG AR+ FD P D + WN++I GY ++G + A+++F L
Sbjct: 441 GFVASSLIFMYSKCGVIEDARKSFDA---TPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 497
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ +VK + +FVAVL+AC H G V++ M+ D+G+ P+ EH+ CM+DLLGR+G
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 557
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
RLDEA+ LI +P EP V+ +LLGAC + +L ++A L E+EPE +V+LS+
Sbjct: 558 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 617
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ L RW + I++++ +R + K+PG S
Sbjct: 618 MFGHLRRWNEKASIKRLMKERGVKKVPGWS 647
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 168/382 (43%), Gaps = 73/382 (19%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+F S++ A + Y++ G+QVH + +K+ + + G+AL+DMY KC + A VF+ +
Sbjct: 102 SFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSI 161
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW---------------- 116
RN +TWN +I+G G A L + + EG + D T+
Sbjct: 162 N-IRNSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLT 220
Query: 117 -------------------NSMISGFSQLGMRFEA------------------------- 132
N++I+ +S+ G +A
Sbjct: 221 TQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSMLAAYLV 280
Query: 133 -------FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
F+LF +MQ G P + TSV+SA + S GK HG VI+ L +
Sbjct: 281 NNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPI 340
Query: 186 ATALISMYMKCGQPSW--ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +LI+MY+K S A F+ E K D WN++++G+ ++G E A++ F+ M+
Sbjct: 341 SNSLIAMYLKSHSKSMDEALNIFESLENK--DHVSWNSILTGFSQSGLSEDALKFFENMR 398
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ V + +F AVL +C + Q+ ++ G +P ++ + + G +
Sbjct: 399 SQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-GFEPNGFVASSLIFMYSKCGVI 457
Query: 304 DEARELIRELPEPTVSVYHSLL 325
++AR+ P+ + ++SL+
Sbjct: 458 EDARKSFDATPKDSSIAWNSLI 479
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 34 HGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGR 93
H L +K + ++ Y KCG + A +F E R+ ++WNTMIAG + G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGE-TSQRDAVSWNTMIAGFVNLGN 80
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
E A+E + + GF D ++ S++ G + +G
Sbjct: 81 FETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY------------------------- 115
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+++G++ H +++ + +AL+ MY KC + A F I+
Sbjct: 116 ----------VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR- 164
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+ WNA+ISGY + G+ +A + D M+ E V+ + +F
Sbjct: 165 -NSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTF 204
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
+ +AL H I++ A +IS Y KCG+ A + F E D
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG--ETSQRDAVS 67
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN MI+G+ G +E+A+E M++ + SF ++L G+V+ Q+ +MM
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMM- 126
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
G + ++D+ + R+++A E+ + + +++L+
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALI 173
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 211/390 (54%), Gaps = 39/390 (10%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E S +PN +T ++V++ACA L+ +QVH + T++ +AL+D+Y KCGC
Sbjct: 230 EIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCY 289
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
P A ++F ++ +N+ WN MI+G
Sbjct: 290 PLARDLFNKMP-EKNLFCWNI-----------------------------------MING 313
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ EA LF +MQ +G+ + S+L AC L AL+LGK H ++ + + D
Sbjct: 314 HVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD 373
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ TAL+ MY KCG A R F E+ D W A+I G G+ A+E+F M
Sbjct: 374 VALGTALVDMYAKCGSIESAMRVFQ--EMPEKDVMTWTALIVGLAMCGQGLKALELFHEM 431
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q +VKP++ +FV VL+AC HAG V++ + F M + +G++P EH+GCMVD+LGR+GR
Sbjct: 432 QMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGR 491
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
+ EA +LI+ +P P V LL AC H N + E A +L E++P+N +V+LSNI
Sbjct: 492 IAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNI 551
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
Y+ + WE ++R+++ +R + K PG SA
Sbjct: 552 YSSMKNWEAAKKMRELMVERNIKKPPGCSA 581
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 174/369 (47%), Gaps = 61/369 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF S+ +C L G+Q+H + K+ SD I L++MY CGCL A
Sbjct: 137 DPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARK 193
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++++++W TM I ++Q
Sbjct: 194 VFDKMV-NKSVVSWATM-----------------------------------IGAYAQWD 217
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF +M+ + P+ + +VL+ACA L+ K+ H ++ + + +
Sbjct: 218 LPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTS 277
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ +Y KCG AR F++ P+ F WN MI+G+ + +YE A+ +F+ MQ
Sbjct: 278 ALMDVYCKCGCYPLARDLFNKM---PEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334
Query: 247 VKPNSASFVAVLSACGHAGHVD--KALQIFT---MMDDDFGLKPKQEHFGCMVDLLGRSG 301
VK + + ++L AC H G ++ K L ++ ++ D L +VD+ + G
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTA------LVDMYAKCG 388
Query: 302 RLDEARELIRELPEPTVSVYHSL---LGACWCHLNS-DLGEEMAMKLQEMEPENPTPFVI 357
++ A + +E+PE V + +L L C L + +L EM M E++P+ T +
Sbjct: 389 SIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM--SEVKPDAITFVGV 446
Query: 358 LSNI-YAGL 365
L+ +AGL
Sbjct: 447 LAACSHAGL 455
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 121/254 (47%), Gaps = 13/254 (5%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT S++ AC L L+ G+ +H K + + D +GTALVDMY KCG + A VF
Sbjct: 338 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 397
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
QE+ ++++TW +I G+ + G+ KA+ELF + KPD T+ +++ S G+
Sbjct: 398 QEMP-EKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLV 456
Query: 130 FEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E F M + G+ PS++ C+ +L ++ E + + D +
Sbjct: 457 NEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA------EAEDLIQNMPMAPDYFV 510
Query: 186 ATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
L+S G A R Q E+ P + + + + Y +E+A ++ +LM +
Sbjct: 511 LVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 570
Query: 245 EKV-KPNSASFVAV 257
+ KP S + V
Sbjct: 571 RNIKKPPGCSAIEV 584
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 96/232 (41%), Gaps = 18/232 (7%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM--YMKCGQPSWARRFFD 207
C+ S L C +S LK + H ++R L D A+ +++ G +AR F+
Sbjct: 43 CLLS-LEKCTTMSQLK---QIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFN 98
Query: 208 QFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
Q P+ F N++I GY A+ + LM + + P+ +F ++ +CG
Sbjct: 99 QI---PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE 155
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
K L + G ++++ G L AR++ ++ +V + +++G
Sbjct: 156 -GKQLHCHS---TKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIG 211
Query: 327 ACWCHLNSDLGEEMAMKLQEMEPENPTPF-VILSNIYAGLGRWEDVGRIRQM 377
A + DL E + ME + P + L N+ R D+ +Q+
Sbjct: 212 A---YAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQV 260
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 208/388 (53%), Gaps = 43/388 (11%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ T ++S+ A ++ L+ GRQVH ++ K ++D + + L+ MY KCG
Sbjct: 385 SVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG----- 439
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ E A +F+ +A + D WNSM++G S
Sbjct: 440 ---------------------------KVEMAKRIFDRIA----ELDIVCWNSMMAGLSL 468
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ EAF F+KM+ GM PS +VLS CA LS+L G++ H + R D +
Sbjct: 469 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFV 528
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ALI MY KCG AR FD K + WN MI GY +NG + AV +++ M
Sbjct: 529 GSALIDMYSKCGDVDAARWVFDMMLGK--NTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 586
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ +FVAVL+AC H+G VD ++IF M + G++P +H+ C++D LGR+GRL E
Sbjct: 587 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 646
Query: 306 ARELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
A LI ++P +P ++ LL +C + + L A +L ++P+N P+V+L+NIY
Sbjct: 647 AEVLIDKMPCKYDPI--IWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIY 704
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ LGRW+D +R++++ Q+ K PG S
Sbjct: 705 SSLGRWDDAKAVRELMSYNQVVKDPGYS 732
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 35/309 (11%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+QVH LT+K +SD + +L+DMY K G + A +F + ++++WN MIAG
Sbjct: 242 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAGYG 300
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPAT-------------------------------WNS 118
+S KA+E + + + GF+PD T WN+
Sbjct: 301 QKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNT 360
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++SG+SQ EA KLF +MQ + P + +LS+ A + L+ G++ H +A
Sbjct: 361 ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAV 420
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D +A+ LI MY KCG+ A+R FD+ I D WN+M++G N + A
Sbjct: 421 FRTDIYLASGLIGMYSKCGKVEMAKRIFDR--IAELDIVCWNSMMAGLSLNSLDKEAFTF 478
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M+++ + P+ S+ VLS C + + Q+ + + + G ++D+
Sbjct: 479 FKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYS 537
Query: 299 RSGRLDEAR 307
+ G +D AR
Sbjct: 538 KCGDVDAAR 546
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 63/331 (19%)
Query: 8 EPNSVTFISVISA------CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
E N V++ ++ISA C +L+ ++ GR+ HG+++KI ++ +G AL+ MY KC C
Sbjct: 99 ERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRC 158
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A F ++ +P+ ++ +M+
Sbjct: 159 IGDAIQAFGDVP------------------------------------EPNEVSFTAMMG 182
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------------LSALKLG 167
G + EAF+LF M + ++SVL C+ LS+ G
Sbjct: 183 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 242
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
++ H I+ D + +L+ MY K G A F + WN MI+GYG
Sbjct: 243 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF--VNMPEVSVVSWNVMIAGYG 300
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ + A+E MQ +P+ ++V +L AC +G ++ Q+F M P
Sbjct: 301 QKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSL 355
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
+ ++ ++ EA +L RE+ +V
Sbjct: 356 SSWNTILSGYSQNENHKEAVKLFREMQFRSV 386
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ S+L C D A GK H H++R+ L+ D ++ LI Y KC +RR FDQ
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV----------KPNSASFVAVLSA 260
+ D WNA++ Y + E E A +F M + + N A V
Sbjct: 68 KR--DIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVE 125
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
CG H + I +D++ + ++ + + + +A + ++PEP
Sbjct: 126 CGRRCH---GISIKIGLDNNIYVG------NALLGMYAKCRCIGDAIQAFGDVPEPNEVS 176
Query: 321 YHSLLGA 327
+ +++G
Sbjct: 177 FTAMMGG 183
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 214/383 (55%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T +SV+SACA + +L G ++H + +K S ++ +L+DMY KC C+ A V
Sbjct: 398 PDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEV 457
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + G +N+++ W S+I G
Sbjct: 458 FRNISG-KNVVS-----------------------------------WTSLILGLRINNR 481
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FEA F +M+ + M P+ + SVLSACA + AL GKE H H +R + D + A
Sbjct: 482 SFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNA 540
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY++CG+ A +QF + D WN +++GY + G+ + AVE+FD M + ++
Sbjct: 541 ILDMYVRCGRKVPA---LNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIH 597
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+++L AC +G V + L+ F +M + + L P +H+ C+VD+LGR+G+LD+A +
Sbjct: 598 PDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYD 657
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+++P P +++ +LL AC H N +LGE A ++ E + ++ +++L N+YAG G
Sbjct: 658 FIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGN 717
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V ++R ++ +R L+ PG S
Sbjct: 718 WDKVSKVRSLMRERGLSADPGCS 740
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 161/356 (45%), Gaps = 41/356 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF SV+ CA + + G+++H ++ +SD +G AL+ MY+KCG + A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ K D +WN+MISG+ + G
Sbjct: 255 LFDKMP------------------------------------KRDRISWNAMISGYFENG 278
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +LF M+ + P L +T+V SAC L +LG+ HG+V++++ D SM
Sbjct: 279 GGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNN 338
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY G+ A F + E K D W AMI+ + AVE + +M+ E +
Sbjct: 339 SLIQMYSSLGRLEEAETVFSRMESK--DVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V+VLSAC GH+D +++ + GL ++D+ + +D A
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKT-GLVSHVIVSNSLIDMYSKCKCVDNAL 455
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
E+ R + V + SL+ +N+ E + Q E P ++S + A
Sbjct: 456 EVFRNISGKNVVSWTSLILG--LRINNRSFEALLFFRQMKESMKPNSVTLISVLSA 509
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 25/260 (9%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WN ++ G+++ G EA L+ +M + P++ SVL CA +S + GKE H
Sbjct: 162 DVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIH 221
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
HVIR D + ALI+MY+KCG S AR FD+ + D WNAMISGY NG
Sbjct: 222 AHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKR--DRISWNAMISGYFENGG 279
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSAC----------GHAGHVDKALQIFTMMDDDF 281
+E+F +M++ V P+ + V SAC G G+V K+ +F
Sbjct: 280 GLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKS---------EF 330
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM- 340
G + ++ + GRL+EA + + V + +++ + H E
Sbjct: 331 GGDISMNN--SLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETY 388
Query: 341 -AMKLQEMEPENPTPFVILS 359
M+L+ + P+ T +LS
Sbjct: 389 KMMELEGILPDEITLVSVLS 408
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 89/165 (53%), Gaps = 8/165 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MKE + +PNSVT ISV+SACA + L G+++H L+ D + A++DMY++CG
Sbjct: 492 MKESM--KPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCG 549
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A N F K +++ WN ++ G G+++ A+ELF+ + PD T+ S++
Sbjct: 550 RKVPALNQFNSQK--KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLL 607
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL 161
S+ GM E + F M++ + P+LK CV +L L
Sbjct: 608 CACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQL 652
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ SV+ ACA L L++G VHG +K D + + +VDMY KCG + A
Sbjct: 436 EPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQK 495
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + G + +WNS+ISGFS
Sbjct: 496 LHDRIGGQELV------------------------------------SWNSIISGFSLNK 519
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F +M G+ P +VL CA+L+ ++LGK+ HG +I+ ++ DE +++
Sbjct: 520 QSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISS 579
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ + D WNAMI GY +G+ A+E+F+ MQQ V
Sbjct: 580 TLVDMYAKCGNMPDSLLMFEK--AQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANV 637
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FVAVL AC H G +D + F +M + L+P+ EHF CMVD+LGRS EA
Sbjct: 638 VPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEAL 697
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ IR +P E ++ +LL C + ++ E A + ++P++ + +++LSN+YA G
Sbjct: 698 KFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESG 757
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R R+++ +L K PG S
Sbjct: 758 KWVDVSRTRRLMRQGRLKKEPGCS 781
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 150/334 (44%), Gaps = 14/334 (4%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L G+ H L T + L+ MY +CG A VF ++ R+ ++WNTM+
Sbjct: 20 LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVF-DVMPHRDTVSWNTMLT 78
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
G + A LF + PD +WN+++SG+ Q GM ++ L +M G+ P
Sbjct: 79 AYAHAGDTGAAASLFGAMP----DPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAP 134
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ +L AC L L LG + H ++ L D +AL+ MY KC A RFF
Sbjct: 135 DRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFF 194
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+ + W A I+G +N +Y +E+F MQ+ + + ++ +V +C
Sbjct: 195 HG--MGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITC 252
Query: 267 VDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ A Q+ + + F + +VD+ ++ L +AR LP TV ++++
Sbjct: 253 LSTARQLHAHAIKNKF--SADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMM 310
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
+ + LG E A++L + + F ++S
Sbjct: 311 VGL---VRTGLGAE-ALQLFQFMTRSGIGFDVVS 340
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 164/383 (42%), Gaps = 60/383 (15%)
Query: 10 NSVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ V+ V SACA + YLQ G QVH L +K D + A++D+Y KC L A+ V
Sbjct: 337 DVVSLSGVFSACAEVKGYLQ-GLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLV 395
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQE++ + D +WN++I+ Q
Sbjct: 396 FQEME------------------------------------QRDSVSWNAIIAALEQNEC 419
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +M GM P SVL ACA L +L+ G HG I++ L D +++
Sbjct: 420 YEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG + A++ D+ I + WN++ISG+ N + E A + F M VK
Sbjct: 480 VVDMYCKCGMITEAQKLHDR--IGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVK 537
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------CMVDLLGRSGR 302
P+ ++ VL C + ++ QI G KQE G +VD+ + G
Sbjct: 538 PDHFTYATVLDTCANLATIELGKQI-------HGQIIKQEMLGDEYISSTLVDMYAKCGN 590
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP----FVIL 358
+ ++ + + + +++++ C L+ E + M + M+ N P FV +
Sbjct: 591 MPDSLLMFEKAQKLDFVSWNAMI--CGYALHGQGFEALEM-FERMQQANVVPNHATFVAV 647
Query: 359 SNIYAGLGRWEDVGRIRQMINDR 381
+ +G +D R ++ R
Sbjct: 648 LRACSHVGLLDDGCRYFYLMTSR 670
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 146/360 (40%), Gaps = 57/360 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++ AC L L G Q+H + +K + D G+ALVDMY KC L
Sbjct: 134 PDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSL------ 187
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E A+ F G+ + +W + I+G Q
Sbjct: 188 --------------------------EDALRFFHGMGER----NSVSWGAAIAGCVQNEQ 217
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+LF +MQ G+ S SV +CA ++ L ++ H H I+ + D + TA
Sbjct: 218 YTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTA 277
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ +Y K ARR F F + NAM+ G R G A+++F M + +
Sbjct: 278 IVDVYAKADSLVDARRAF--FSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIG 335
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTM-----MDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ S V SAC + LQ+ + D D ++ ++DL G+ L
Sbjct: 336 FDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVR------NAILDLYGKCKAL 389
Query: 304 DEARELIRELPEPTVSVYHSLLGA-----CWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
EA + +E+ + +++++ A C+ + L E M MEP++ T +L
Sbjct: 390 VEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNE---MLRYGMEPDDFTYGSVL 446
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 50/280 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ +V+ CA+L ++ G+Q+HG +K E D I + LVDMY KCG +P +
Sbjct: 537 KPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLL 596
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F++ + + ++WN MI G L+G+ +A+E+FE + P+ AT+ +++ S +G
Sbjct: 597 MFEKAQ-KLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVG 655
Query: 128 MRFEAFKLFEKM---------------------QSTGMVPSLKCVTS------------V 154
+ + + F M +S G +LK + S +
Sbjct: 656 LLDDGCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTL 715
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ---PSWARRFFDQFEI 211
LS C +++ + +V+R D + D S+ L ++Y + G+ S RR Q +
Sbjct: 716 LSICKIRQDVEVAETAASNVLRLDPD-DSSVYILLSNVYAESGKWVDVSRTRRLMRQGRL 774
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
K + W E E+ + +KV P S
Sbjct: 775 KKEPGCSW------------IEVQSEMHGFLAGDKVHPRS 802
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ SV +CA++ L RQ+H +K + +D ++GTA+VD+Y K L A F L
Sbjct: 239 AYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSL 298
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+T+ A N+M+ G + G+ EA
Sbjct: 299 PN-------HTVQA-----------------------------CNAMMVGLVRTGLGAEA 322
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF+ M +G+ + ++ V SACA++ G + H I++ + D + A++ +
Sbjct: 323 LQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDL 382
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F + E + D WNA+I+ +N YE + + M + ++P+
Sbjct: 383 YGKCKALVEAYLVFQEMEQR--DSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDF 440
Query: 253 SFVAVLSACG 262
++ +VL AC
Sbjct: 441 TYGSVLKACA 450
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 210/381 (55%), Gaps = 40/381 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV++A L L G Q HG +K ++ +G+ L+D+Y KCG
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG------------ 289
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE- 131
G M + R ++FE + +PD WN+M+SG+SQ E
Sbjct: 290 --------------GGMSDCR-----KVFEEIT----EPDLVLWNTMVSGYSQNEEFLED 326
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE-SMATALI 190
A + F +MQ G P+ V+SAC++LS+ GK+ H +++D+ + S+ ALI
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG ARR FD+ + + N+MI+GY ++G ++ +F M + ++ P
Sbjct: 387 AMYSKCGNLQDARRLFDR--MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
S +F++VLSAC H G V++ F MM + F ++P+ EH+ CM+DLLGR+G+L EA LI
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
+P P + SLLGAC H N +L + A ++ ++EP N P+V+LSN+YA GRWE
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+V +R+ + DR + K PG S
Sbjct: 565 EVATVRKFMRDRGVKKKPGCS 585
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 146/328 (44%), Gaps = 18/328 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTL--KIEKQSDTMIGTALVDMYLKC----GC 61
EP+ V++ ++ISA Y G L L + + M G L + C G
Sbjct: 102 EPDLVSYNTLISA-----YADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGL 156
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ H+V + N ++ NG + A +F G+ G D +WNSMI
Sbjct: 157 IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM---GGIRDEVSWNSMIV 213
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ Q +A LF++M G+ + + SVL+A L L G + HG +I+ ++
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Query: 182 DESMATALISMYMKCGQP-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ + + LI +Y KCG S R+ F+ EI D WN M+SGY +N E+ E A+E F
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFE--EITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ +PN SFV V+SAC + + QI ++ + ++ + +
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGA 327
G L +AR L + E +S++
Sbjct: 392 CGNLQDARRLFDRMAEHNTVSLNSMIAG 419
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F ++ C + L G+ +H L +K T + +Y KCG L A FQ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
N+ ++N +IA R A +LF+ + +PD ++N++IS ++ G A
Sbjct: 71 DP-NVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPAL 125
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF M+ G+ +++V++AC D + L + H + + + S+ AL++ Y
Sbjct: 126 GLFSGMREMGLDMDGFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYY 183
Query: 194 MKCGQPSWARR-FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
K G A+R F+ I+ D WN+MI YG++ E A+ +F M + + +
Sbjct: 184 GKNGDLDDAKRVFYGMGGIR--DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGC-MVDLLGR-SGRLDEAREL 309
+ +VL+A + LQ ++ F + H G ++DL + G + + R++
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGF---HQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 310 IRELPEPTVSVYHSLL 325
E+ EP + ++++++
Sbjct: 299 FEEITEPDLVLWNTMV 314
>gi|222622633|gb|EEE56765.1| hypothetical protein OsJ_06312 [Oryza sativa Japonica Group]
Length = 836
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 219/383 (57%), Gaps = 11/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT +++I ++ ++ ++ HG +L++ D+ + A++D Y KCG L A +F
Sbjct: 371 DSVTILNIIRM-STFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLF 429
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ L G RNI+T NTMI+ + N E A F +A + D TWN M ++Q +
Sbjct: 430 RSLAG-RNIVTGNTMISCYLKNNCVEDAEMTFNHMA----EKDLTTWNLMSRLYAQNDLC 484
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+AF LF ++QS G+ P +T++LSAC LS+++L K+ HG+++RA L +D + AL
Sbjct: 485 DQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGAL 543
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ Y KCG + A F Q + D F AMI Y +G E AVE+F M +KP
Sbjct: 544 LDAYSKCGNIANAYNLF-QVSLHKDLVIF-TAMIGAYAMHGMAEKAVELFSKMLTLDIKP 601
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ A+LSAC HAG VD ++IF + + +G++P +EH CMVDLL RSGRL +A
Sbjct: 602 DHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSF 661
Query: 310 IRELPEPTV--SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++P V + + SLLGAC H +G+ A +L ME E+ +VI+SNI+A +
Sbjct: 662 ALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDK 721
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +R+++ + + K G S
Sbjct: 722 WESVEHVRKLMKSKDMKKPAGCS 744
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 46/326 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +VT V+ CA L L+ GR +HG +K + DT+ G ALV MY KCG
Sbjct: 61 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCG-------- 112
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP----DPATWNSMISGFS 124
AM+ AH F D +WNS+I+G+S
Sbjct: 113 -------------------------GSIAMDD----AHLAFSTICCKDVVSWNSIIAGYS 143
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ G+ EA LF +M S +P+ + +VL C+ + GKE HG V+R L D
Sbjct: 144 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 203
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S++ AL++ Y K + F K D WN +I+GY N A+++F +
Sbjct: 204 SVSNALMAHYSKVCEMRAVESIFRSS--KMGDIVTWNTVIAGYVMNRYPSRALKLFQGLL 261
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ P+S S +++L+AC G++ +++ + L + +V + R
Sbjct: 262 FAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 321
Query: 304 DEA-RELIRELPEPTVSVYHSLLGAC 328
D A R I + +VS ++++L AC
Sbjct: 322 DAAFRSFITIQNKDSVS-WNAILSAC 346
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 61/371 (16%)
Query: 2 KECLSDEPNSVTFISVISACASLLY-LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ECL PN T +V+ C+ + Y +G+++HG ++ + D + AL+ Y K
Sbjct: 161 EECL---PNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVC 217
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ ++F RS K D TWN++I
Sbjct: 218 EMRAVESIF-----------------------RSSK-------------MGDIVTWNTVI 241
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADL 179
+G+ A KLF+ + GM P + S+L+ACA + L++G HG++ R +L
Sbjct: 242 AGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPEL 301
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEI 238
++ S+ AL+S Y +C + A R F I+ D WNA++S + + E +
Sbjct: 302 LQETSLMNALVSFYSQCDRFDAAFRSF--ITIQNKDSVSWNAILSACANSEHHIEQFFRL 359
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------C 292
M + + +S + + ++ G M+ + G + + G
Sbjct: 360 LGEMWHDVTQWDSVTILNIIRMSTFCG--------IKMVQESHGYSLRVGYTGDSSVANA 411
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
++D + G L +A L R L + ++++ C+L ++ E+ M M ++
Sbjct: 412 ILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMIS---CYLKNNCVEDAEMTFNHMAEKDL 468
Query: 353 TPFVILSNIYA 363
T + ++S +YA
Sbjct: 469 TTWNLMSRLYA 479
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 43/231 (18%)
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
+DMY + G L AH VF E+ S D
Sbjct: 1 MDMYGRIGSLADAHTVFDEMSCS------------------------------------D 24
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGM---VPSLKCVTSVLSACADLSALKLGKE 169
N +I+ S+ G+ + F LF M ++G+ +P+ V VL CA L L+ G+
Sbjct: 25 AVCRNILITASSRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRS 84
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGR 228
HG+VI+ L D AL+SMY KCG F I D WN++I+GY
Sbjct: 85 IHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSE 144
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG---HAGHVDKALQIFTM 276
NG +E A+ +F M E+ PN ++ VL C + H K + F +
Sbjct: 145 NGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVV 195
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 159/393 (40%), Gaps = 77/393 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SV+ IS+++ACA + L+ G +VHG + E +T + ALV Y +C A
Sbjct: 267 PDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFR 326
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ +++ ++WN +++ SE +E F L E + D W+S+
Sbjct: 327 SFITIQ-NKDSVSWNAILSAC---ANSEHHIEQFFRLLGEMWH-DVTQWDSV-------- 373
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ + + + C +K+ +E+HG+ +R D S+A
Sbjct: 374 -------------------TILNIIRMSTFC----GIKMVQESHGYSLRVGYTGDSSVAN 410
Query: 188 ALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAF 218
A++ Y KCG A F + D
Sbjct: 411 AILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTT 470
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN M Y +N + A +F +Q E + P++ S +LSAC H V Q M
Sbjct: 471 WNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYM- 529
Query: 279 DDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
L+ E G ++D + G + A L + + ++ +++GA H ++
Sbjct: 530 ----LRASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAE 585
Query: 336 LGEEMAMKL--QEMEPENPTPFVILSNI-YAGL 365
E+ K+ +++P++ +LS +AGL
Sbjct: 586 KAVELFSKMLTLDIKPDHVVLTALLSACSHAGL 618
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 136/381 (35%), Positives = 210/381 (55%), Gaps = 40/381 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV++A L L G Q HG +K ++ +G+ L+D+Y KCG
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCG------------ 289
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE- 131
G M + R ++FE + +PD WN+M+SG+SQ E
Sbjct: 290 --------------GGMSDCR-----KVFEEIT----EPDLVLWNTMVSGYSQNEEFLED 326
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE-SMATALI 190
A + F +MQ G P+ V+SAC++LS+ GK+ H +++D+ + S+ ALI
Sbjct: 327 ALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALI 386
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG ARR FD+ + + N+MI+GY ++G ++ +F M + ++ P
Sbjct: 387 AMYSKCGNLQDARRLFDR--MAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPT 444
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
S +F++VLSAC H G V++ F MM + F ++P+ EH+ CM+DLLGR+G+L EA LI
Sbjct: 445 SITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLI 504
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
+P P + SLLGAC H N +L + A ++ ++EP N P+V+LSN+YA GRWE
Sbjct: 505 ARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWE 564
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+V +R+ + DR + K PG S
Sbjct: 565 EVATVRKFMRDRGVKKKPGCS 585
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 148/328 (45%), Gaps = 18/328 (5%)
Query: 8 EPNSVTFISVISA------CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
EP+ V++ ++ISA A L L G + GL + S + TA D G
Sbjct: 102 EPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVI--TACCD---DVGL 156
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ H+V + N ++ NG + A +F G+ G D +WNSMI
Sbjct: 157 IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGM---GGIRDEVSWNSMIV 213
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+ Q +A LF++M G+ + + SVL+A L L G + HG +I+ ++
Sbjct: 214 AYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQ 273
Query: 182 DESMATALISMYMKCGQP-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEIF 239
+ + + LI +Y KCG S R+ F+ EI D WN M+SGY +N E+ E A+E F
Sbjct: 274 NSHVGSGLIDLYSKCGGGMSDCRKVFE--EITEPDLVLWNTMVSGYSQNEEFLEDALECF 331
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
MQ +PN SFV V+SAC + + QI ++ + ++ + +
Sbjct: 332 RQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSK 391
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGA 327
G L +AR L + E +S++
Sbjct: 392 CGNLQDARRLFDRMAEHNTVSLNSMIAG 419
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 149/316 (47%), Gaps = 16/316 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F ++ C + L G+ +H L +K T + +Y KCG L A FQ++
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
N+ ++N +IA R A +LF+ + +PD ++N++IS ++ G A
Sbjct: 71 DP-NVFSFNAIIAAYAKESRPLIAHQLFDQIP----EPDLVSYNTLISAYADCGETAPAL 125
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF M+ G+ +++V++AC D + L + H + + + S+ AL++ Y
Sbjct: 126 GLFSGMREMGLDMDXFTLSAVITACCD--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYY 183
Query: 194 MKCGQPSWARR-FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
K G A+R F+ I+ D WN+MI YG++ E A+ +F M + + +
Sbjct: 184 GKNGDLDDAKRVFYGMGGIR--DEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMF 241
Query: 253 SFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGC-MVDLLGR-SGRLDEAREL 309
+ +VL+A + LQ ++ F + H G ++DL + G + + R++
Sbjct: 242 TLASVLTAFTCLEDLSGGLQFHGQLIKTGF---HQNSHVGSGLIDLYSKCGGGMSDCRKV 298
Query: 310 IRELPEPTVSVYHSLL 325
E+ EP + ++++++
Sbjct: 299 FEEITEPDLVLWNTMV 314
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 134/388 (34%), Positives = 208/388 (53%), Gaps = 43/388 (11%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ T ++S+ A ++ L+ GRQVH ++ K ++D + + L+ MY KCG
Sbjct: 414 SVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG----- 468
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ E A +F+ +A + D WNSM++G S
Sbjct: 469 ---------------------------KVEMAKRIFDRIA----ELDIVCWNSMMAGLSL 497
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ EAF F+KM+ GM PS +VLS CA LS+L G++ H + R D +
Sbjct: 498 NSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFV 557
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+ALI MY KCG AR FD K + WN MI GY +NG + AV +++ M
Sbjct: 558 GSALIDMYSKCGDVDAARWVFDMMLGK--NTVTWNEMIHGYAQNGCGDEAVLLYEDMIGS 615
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ +FVAVL+AC H+G VD ++IF M + G++P +H+ C++D LGR+GRL E
Sbjct: 616 GEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHE 675
Query: 306 ARELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
A LI ++P +P ++ LL +C + + L A +L ++P+N P+V+L+NIY
Sbjct: 676 AEVLIDKMPCKYDPI--IWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIY 733
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ LGRW+D +R++++ Q+ K PG S
Sbjct: 734 SSLGRWDDAKAVRELMSYNQVVKDPGYS 761
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 148/309 (47%), Gaps = 35/309 (11%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+QVH LT+K +SD + +L+DMY K G + A +F + ++++WN MIAG
Sbjct: 271 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWNVMIAGYG 329
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPAT-------------------------------WNS 118
+S KA+E + + + GF+PD T WN+
Sbjct: 330 QKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNT 389
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++SG+SQ EA KLF +MQ + P + +LS+ A + L+ G++ H +A
Sbjct: 390 ILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAV 449
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
D +A+ LI MY KCG+ A+R FD+ I D WN+M++G N + A
Sbjct: 450 FRTDIYLASGLIGMYSKCGKVEMAKRIFDR--IAELDIVCWNSMMAGLSLNSLDKEAFTF 507
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M+++ + P+ S+ VLS C + + Q+ + + + G ++D+
Sbjct: 508 FKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE-GYMNDAFVGSALIDMYS 566
Query: 299 RSGRLDEAR 307
+ G +D AR
Sbjct: 567 KCGDVDAAR 575
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 152/361 (42%), Gaps = 22/361 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + S++ C G+ +H L+ DT + L++ Y KC + +
Sbjct: 2 ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R+I TWN ++ E A LF + +WN++IS ++ G
Sbjct: 62 LFDQMP-KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNG 116
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++ +M G VP+ + SVLSAC L ++ G+ HG I+ L+ + +
Sbjct: 117 FEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGN 176
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KC A + F +P++ +F AM+ G + + A +F LM + ++
Sbjct: 177 ALLGMYAKCRCIGDAIQAFGDVP-EPNEVSF-TAMMGGLADSDQVNEAFRLFRLMLRNRI 234
Query: 248 KPNSASFVAVLSACGHAG-------------HVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+S S +VL C G D Q + G + ++
Sbjct: 235 HVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLL 294
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENP 352
D+ ++G +D A + +PE +V ++ ++ S E ++Q EP+
Sbjct: 295 DMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEI 354
Query: 353 T 353
T
Sbjct: 355 T 355
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 134/324 (41%), Gaps = 57/324 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T SV+SAC +L+ ++ GR+ HG+++KI ++ +G AL+ MY KC C+ A
Sbjct: 135 PTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQA 194
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +P+ ++ +M+ G +
Sbjct: 195 FGDVP------------------------------------EPNEVSFTAMMGGLADSDQ 218
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------------LSALKLGKETHGHV 174
EAF+LF M + ++SVL C+ LS+ G++ H
Sbjct: 219 VNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLT 278
Query: 175 IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
I+ D + +L+ MY K G A F + WN MI+GYG+ +
Sbjct: 279 IKHGFESDLHLNNSLLDMYAKNGNMDSAEMIF--VNMPEVSVVSWNVMIAGYGQKSQSSK 336
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
A+E MQ +P+ ++V +L AC +G ++ Q+F M P + ++
Sbjct: 337 AIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS-----SPSLSSWNTIL 391
Query: 295 DLLGRSGRLDEARELIRELPEPTV 318
++ EA +L RE+ +V
Sbjct: 392 SGYSQNENHKEAVKLFREMQFRSV 415
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 137/384 (35%), Positives = 199/384 (51%), Gaps = 41/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT S++SACA L + G+ +H L +K DT + +LVDMY KCG +P AH V
Sbjct: 340 PNSVTLASLLSACAQLENIVMGKLLHVLVVKY-GLDDTSLRNSLVDMYAKCGLIPDAHYV 398
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F D +WNS+ISG++Q G
Sbjct: 399 FAT------------------------------------TVDKDVVSWNSVISGYAQSGS 422
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDESMAT 187
+EA LF +M+ +P V VLSACA + A ++G HG ++ L + + T
Sbjct: 423 AYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGT 482
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++ Y KCG + AR FD K + W AMI G G G+ ++ +F M +E++
Sbjct: 483 ALLNFYAKCGDATSARMVFDGMGEK--NAVTWAAMIGGCGMQGDGVGSLALFRDMLKEEL 540
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN F +L+AC H+G V++ L IF M + P +H+ CMVDLL R+G L EA
Sbjct: 541 VPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEAL 600
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I ++P +P V V+ + L C H N D GE ++ E+ P+ +V++SN+YA G
Sbjct: 601 DFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDG 660
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW V +R+MI R L K+PG+S
Sbjct: 661 RWGMVKEVREMIKQRGLNKVPGVS 684
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 50/336 (14%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E D N T S+++AC L L G+ VHG +K + ++ + T+L++MY+KCG
Sbjct: 226 MREGFLDG-NVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCG 284
Query: 61 CLPCAHNVFQELK-----GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
+ A +VF E G +++ W MI G G + A+ELF
Sbjct: 285 DIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFT----------DKK 334
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
W ++ P+ + S+LSACA L + +GK H V+
Sbjct: 335 WYRIL-------------------------PNSVTLASLLSACAQLENIVMGKLLHVLVV 369
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ L+ D S+ +L+ MY KCG A F K D WN++ISGY ++G A
Sbjct: 370 KYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDK--DVVSWNSVISGYAQSGSAYEA 426
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFG-C 292
+++F+ M+ E P++ + V VLSAC G + +L F + +GL + G
Sbjct: 427 LDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFAL---KYGLVSSSIYVGTA 483
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+++ + G AR + + E + +++G C
Sbjct: 484 LLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGC 519
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 147/324 (45%), Gaps = 55/324 (16%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V F ++ + L + ++H LK +D+ + T+LVD Y KCG L A VF E
Sbjct: 136 VVFSILLKTASQLRDIVLTTKLHCNILK-SNAADSFVLTSLVDAYSKCGKLRDARKVFDE 194
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGFSQLGMR 129
+ PD + +W SMI + Q
Sbjct: 195 I--------------------------------------PDRSVVSWTSMIVAYVQNECA 216
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E LF +M+ + ++ V S+++AC L L GK HG+VI+ + + +AT+L
Sbjct: 217 EEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSL 276
Query: 190 ISMYMKCGQPSWARRFFDQFEIKP----DDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
++MY+KCG AR FD+F + DD FW AMI GY + G ++A+E+F +
Sbjct: 277 LNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWY 336
Query: 246 KVKPNSASFVAVLSACGHAGHV--DKALQIFTMMD--DDFGLKPKQEHFGCMVDLLGRSG 301
++ PNS + ++LSAC ++ K L + + DD L+ +VD+ + G
Sbjct: 337 RILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLR------NSLVDMYAKCG 390
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
+ +A + + V ++S++
Sbjct: 391 LIPDAHYVFATTVDKDVVSWNSVI 414
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 83/179 (46%), Gaps = 8/179 (4%)
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+ G L + +L + L + L + H ++++++ D + T+L+ Y KCG+
Sbjct: 128 TLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLR 186
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
AR+ FD EI W +MI Y +N E + +F+ M++ + N + ++++A
Sbjct: 187 DARKVFD--EIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTA 244
Query: 261 CGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
C G H K + + + + G++ ++++ + G + +AR + E T
Sbjct: 245 CTKLGCLHQGKWVHGYVIKN---GIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVST 300
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 212/382 (55%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF SV++AC SLL L G+Q+H ++ + + + +G+ALVDMY KC + A VF
Sbjct: 269 DQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVF 328
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + +N+++W M+ G+ Q G
Sbjct: 329 KRMP-QKNVISWTAMLV-----------------------------------GYGQNGFS 352
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA K+F +MQ G+ P + SV+S+CA+L++L+ G + H + + L +++ AL
Sbjct: 353 EEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNAL 412
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I++Y KCG + R F + I+ D W A+++GY + G+ + +F+ M +KP
Sbjct: 413 ITLYGKCGSTENSHRLFTEMNIR--DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKP 470
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VLSAC AG V+K LQ F M + G+ P +H C++DLLGR+GRL+EAR
Sbjct: 471 DGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNF 530
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P P V + +LL +C H + ++G+ A L +EP+NP +V+LS++YA G+W
Sbjct: 531 INNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKW 590
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+ V ++R+ + D+++ K PG S
Sbjct: 591 DKVAQLRRGMRDKRVRKEPGYS 612
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 10/352 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +TF +++ C+ + GRQ++G LK SD +G+ LVDMY K G + A F
Sbjct: 137 NRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYF 196
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ RN++ NTMI G+M G E++ LF GL D +W MI+G Q G+
Sbjct: 197 DEMP-ERNVVMCNTMITGLMRCGMIEESQRLFCGLKER----DSISWTIMITGLMQNGLE 251
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +F +M+ G SVL+AC L AL GK+ H +VIR D + + +AL
Sbjct: 252 REALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSAL 311
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KC A F + K + W AM+ GYG+NG E AV+IF MQ+ V+P
Sbjct: 312 VDMYSKCRSIKSAETVFKRMPQK--NVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEP 369
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +V+S+C + +++ Q F GL ++ L G+ G + + L
Sbjct: 370 DDFTLGSVISSCANLASLEEGAQ-FHCRALVSGLISFITVSNALITLYGKCGSTENSHRL 428
Query: 310 IRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
E+ + +LL A + N +G M ++P+ T +LS
Sbjct: 429 FTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S + S++ C +++H L LK KQ +T + L+ Y K G L AH+VF
Sbjct: 4 SSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVF 63
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ N+ +WNT+++ G + ++F + D +WN ISG++ G
Sbjct: 64 DHIP-QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFR----DGVSWNLAISGYANYGSC 118
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A ++++ M + M + +++L C+ + LG++ +G +++ D + +
Sbjct: 119 SDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP 178
Query: 189 LISMYMKCGQPSWARRFFDQFE-----------------------------IKPDDPAFW 219
L+ MY K G A+R+FD+ +K D W
Sbjct: 179 LVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISW 238
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI--FTMM 277
MI+G +NG A+++F M+ + +F +VL+ACG + + QI + +
Sbjct: 239 TIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIR 298
Query: 278 DDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D K F +VD+ + + A + + +P+ V + ++L
Sbjct: 299 TDH-----KDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAML 343
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T SVIS+CA+L L+ G Q H L S + AL+ +Y KCG +H
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHR 427
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ R+ ++W ++AG G++ + + LFE + G KPD T+ ++S S+ G
Sbjct: 428 LFTEMN-IRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ + + FE M + G++P + T ++ L +E + + D
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRL---EEARNFINNMPCHPDVVGW 543
Query: 187 TALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
L+S G + D ++P +PA + + S Y G+++ ++ M+ +
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDK 603
Query: 246 KVK 248
+V+
Sbjct: 604 RVR 606
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 81/218 (37%), Gaps = 43/218 (19%)
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
M S S+L C + K+ H +++ + ++ LI+ Y K G ++A
Sbjct: 1 MSSSSNYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAH 60
Query: 204 RFFDQ----------------------------FEIKP-DDPAFWNAMISGYGRNGEYES 234
FD F + P D WN ISGY G
Sbjct: 61 HVFDHIPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSD 120
Query: 235 AVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQ 287
AV ++ LM ++ + N +F +L C VD QI F D F P
Sbjct: 121 AVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSP-- 178
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+VD+ + G + +A+ E+PE V + ++++
Sbjct: 179 -----LVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMI 211
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 204/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T + VI+AC+ + GRQ+HG +LK+ + + +ALVDMY KCG + A
Sbjct: 318 PSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKG 377
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ +PD W S+I+G+ Q G
Sbjct: 378 FECIQ------------------------------------QPDVVLWTSIITGYVQNGD 401
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A L+ KMQ G++P+ + SVL AC++L+AL GK+ H +I+ + + + + +A
Sbjct: 402 YEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSA 461
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L +MY KCG R F + + D WNAMISG +NG +E+F+ M E K
Sbjct: 462 LSAMYAKCGSLDDGYRIF--WRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTK 519
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P++ +FV +LSAC H G VD+ F MM D+F + P EH+ CMVD+L R+G+L EA+E
Sbjct: 520 PDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKE 579
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I + + ++ LL A H + DLG KL E+ + +V+LS+IY LG+
Sbjct: 580 FIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGK 639
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV R+R M+ R +TK PG S
Sbjct: 640 WEDVERVRGMMKARGVTKEPGCS 662
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 185/423 (43%), Gaps = 78/423 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+ T V +A ++L + GRQ H L +K D ++L++MY K G + A ++
Sbjct: 114 PNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDL 173
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE--------------------- 107
F E+ RN ++W TMI+G +++A ELF+ + HE
Sbjct: 174 FDEMP-ERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCY 232
Query: 108 ----------------GFKPDPATWNSMISGFSQLGMRFEAFKLFE-------------- 137
G + N++++ + + G +A K FE
Sbjct: 233 MLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMV 292
Query: 138 -----------------KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
M +G +PS + V++AC+D A+ G++ HG+ ++
Sbjct: 293 TGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYE 352
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ +AL+ MY KCG AR+ F+ I+ D W ++I+GY +NG+YE A+ ++
Sbjct: 353 LQLYVLSALVDMYAKCGSIVDARKGFEC--IQQPDVVLWTSIITGYVQNGDYEGALNLYG 410
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLK-PKQEHFGCMVDLLG 298
MQ V PN + +VL AC + +D+ Q+ ++ +F L+ P M
Sbjct: 411 KMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMY---A 467
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFV 356
+ G LD+ + +P V +++++ + + G E+ M L+ +P+N T
Sbjct: 468 KCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVN 527
Query: 357 ILS 359
+LS
Sbjct: 528 LLS 530
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 48/262 (18%)
Query: 9 PNSVTFISVISA---CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
P S + V+ A C L+ GR +H L S T I +L+++Y KC A
Sbjct: 5 PLSHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKA 64
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VF + D +WN +I+ FSQ
Sbjct: 65 NLVFDSIN------------------------------------NKDVVSWNCLINAFSQ 88
Query: 126 LGMR---FEAFKLFEK--MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
LF + M +VP+ +T V +A + LS + G++ H ++ +
Sbjct: 89 QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D A++L++MY K G AR FD E+ + W MISGY + A E+F
Sbjct: 149 HDVFAASSLLNMYCKTGLVFEARDLFD--EMPERNAVSWATMISGYASQELADEAFELFK 206
Query: 241 LMQQEKVKPNSASFV--AVLSA 260
LM+ E+ N FV +VLSA
Sbjct: 207 LMRHEEKGKNENEFVFTSVLSA 228
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 19/224 (8%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V L C L+ G+ H ++ +A +LI++Y KC S A FD
Sbjct: 13 VLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFD--S 70
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-----EKVKPNSASFVAVLSAC---- 261
I D WN +I+ + + + ++ + L +Q + + PN+ + V +A
Sbjct: 71 INNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLS 130
Query: 262 -GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
AG AL + T D ++++ ++G + EAR+L E+PE
Sbjct: 131 DSRAGRQAHALAVKTACSHDVFAASS------LLNMYCKTGLVFEARDLFDEMPERNAVS 184
Query: 321 YHSLL-GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ +++ G L + E + E + +N FV S + A
Sbjct: 185 WATMISGYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSA 228
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 219/384 (57%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV+SACA + L G+ +HG+ +K+ + +L++MY K G L A
Sbjct: 161 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 220
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ R++++WN+M+ N G+++ G
Sbjct: 221 LFEEMP-VRSLVSWNSMVVIHNHN------------------------------GYAEKG 249
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M LF M+ G+ P + ++L AC D + + H ++ R N D +AT
Sbjct: 250 M-----DLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIAT 304
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y K G+ + + F+ EIK D W AM++GY + A+++FDLM +E V
Sbjct: 305 ALLNLYAKLGRLNASEDIFE--EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 362
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + +F +LSAC H+G V++ + F +M + + ++P+ +H+ CMVDLLGRSGRL++A
Sbjct: 363 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 422
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ +P EP+ V+ +LLGAC + N +LG+E+A +L ++P + +++LSNIY+ G
Sbjct: 423 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 482
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W D ++R ++ +R+LT+ PG S
Sbjct: 483 LWRDASKVRALMKERRLTRNPGCS 506
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ + IS+C S+ Y +H +K SD IG LV MY K G
Sbjct: 67 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLG------------ 111
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
E A LF+ + ++ D +WNS++SG S G
Sbjct: 112 --------------------YDEDAQRLFDEMPNK----DLVSWNSLMSGLSGRGYLGAC 147
Query: 133 FKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
F +M++ +G P+ + SV+SACAD+ AL GK HG V++ ++ + +LI+
Sbjct: 148 LNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 207
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY K G A + F++ ++ WN+M+ + NG E +++F+LM++ + P+
Sbjct: 208 MYGKLGFLDAASQLFEEMPVRS--LVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 265
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A+ VA+L AC G +A I + G +++L + GRL+ + ++
Sbjct: 266 ATMVALLRACTDTGLGRQAESIHAYI-HRCGFNADIIIATALLNLYAKLGRLNASEDIFE 324
Query: 312 ELPEPTVSVYHSLLGACWCH 331
E+ + + ++L H
Sbjct: 325 EIKDRDRIAWTAMLAGYAVH 344
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 113/239 (47%), Gaps = 13/239 (5%)
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
F+L Q +V SL S ++ + SA+ H VI++ D + L+SM
Sbjct: 53 FQLSPPFQVYSIVQSLVFAISSCTSVSYCSAI------HARVIKSLNYSDGFIGDRLVSM 106
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-PNS 251
Y K G A+R FD E+ D WN+++SG G + + F M+ E + PN
Sbjct: 107 YFKLGYDEDAQRLFD--EMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNE 164
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ ++V+SAC G +D+ + ++ G+ K + ++++ G+ G LD A +L
Sbjct: 165 VTLLSVVSACADMGALDEGKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFE 223
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIY-AGLGR 367
E+P ++ ++S++ + ++ G ++ MK + P+ T +L GLGR
Sbjct: 224 EMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 282
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/383 (35%), Positives = 213/383 (55%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT I V+S A L L+ GR++HG + + ++DMY+KCG L A +V
Sbjct: 220 PDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSV 279
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + + I++W TMI G G + A ++F+ + P WN++++G+ Q
Sbjct: 280 FEGID-KKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFP----WNALMTGYVQCKR 334
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF MQ + P + ++LSAC+ L AL++G H ++ R ++ + T
Sbjct: 335 GKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTN 394
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A R F EI + W AMISG +G + A++ F M + ++
Sbjct: 395 LVDMYSKCGNIEKAIRVFK--EIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQ 452
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC HAG V + + F++M + L+ K +H+ CMVDLLGR+G LDEA
Sbjct: 453 PDEITFIGVLSACCHAGLVKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEH 512
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ +P EP V+ +L AC H N LGE+ AMKL E++P + +V+L+N+YA
Sbjct: 513 LVNTMPMEPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANM 572
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ ++R M+ + K+PG S
Sbjct: 573 RKKADKVRVMMRHLGVEKVPGCS 595
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 178/373 (47%), Gaps = 30/373 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +TF ++ ACA L +G V G L + +D + A + C + A
Sbjct: 115 SARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEA 174
Query: 66 HNVFQELKGS--RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISG 122
+F GS R++++WNT+I G + G +A+E+F + +G PD T ++SG
Sbjct: 175 RKLFD---GSHVRDLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSG 231
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+QL +L ++S G ++C +++ D+ +K G + ++K
Sbjct: 232 SAQLRDLELGRRLHGYVESHG----VRCTVRLMNVVMDMY-IKCGDLERAKSVFEGIDKK 286
Query: 183 ESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFD 240
++ T +I Y + G AR+ FD+ P+ F WNA+++GY + + A+ +F
Sbjct: 287 TIVSWTTMIVGYAQFGLMDDARKVFDEM---PERDVFPWNALMTGYVQCKRGKEALRLFH 343
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM-----VD 295
MQ+ V+P+ + V +LSAC G ++ + + +D ++ M VD
Sbjct: 344 DMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDR------RRVSLSVMLGTNLVD 397
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPT 353
+ + G +++A + +E+PE + +++ H ++D+ + ++ E ++P+ T
Sbjct: 398 MYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEIT 457
Query: 354 PFVILSN-IYAGL 365
+LS +AGL
Sbjct: 458 FIGVLSACCHAGL 470
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +T ++++SAC+ L L+ G VH + M+GT LVDMY KCG + A
Sbjct: 351 EPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIR 410
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ +N LTW MI+G+ +G ++ A++ F+ + G +PD T+ ++S G
Sbjct: 411 VFKEIP-EKNALTWTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAG 469
Query: 128 MRFEAFKLFEKMQS 141
+ E + F M S
Sbjct: 470 LVKEGQEFFSLMVS 483
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 207/385 (53%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + VT I V+SAC L + + D +G LVD + + G L A
Sbjct: 650 KADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEK 709
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +K RNI+T N MIA A ++F+ + K D +W+SMISG+SQ
Sbjct: 710 VFFNMK-VRNIVTMNAMIAAYAKGQDIVSARKIFDQIP----KKDLISWSSMISGYSQAN 764
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F +MQ + P + SV+S+CA L AL LGK H +V R ++ D M
Sbjct: 765 HFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMEN 824
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MYMKCG A + F E+K D WN++I G NG + ++ +F M E
Sbjct: 825 SLIDMYMKCGSAKEALQVFK--EMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGF 882
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+ VL AC +A V++ L F M + L+P+ +H+GC+VDLLGR+G+L++A
Sbjct: 883 RPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKAL 942
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I E+P +P V+ LLG+C H + + E + KL E+EP N + +LSN YA
Sbjct: 943 RFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAH 1002
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW + +RQ + D + K PG SA
Sbjct: 1003 RWSEAMNVRQCMADTDVRKSPGCSA 1027
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 213/381 (55%), Gaps = 9/381 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+D+ + TF + ACA L + + Q+HGL ++ + T + TALV++Y+ CGCL +
Sbjct: 86 ADDTYAFTF--ALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADS 143
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F+E+ +N ++WN +I G G E A LFE + + +W+ MI G+++
Sbjct: 144 RMAFEEMP-VKNAVSWNVVITGFAGWGEVEYARLLFERMPCR----NVVSWSGMIDGYTR 198
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
EA LF +M + G+ PS V +V+ A +++ + +G+ HG+ + L D +
Sbjct: 199 ACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRV 258
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+LI +Y K G + R FD+ + + W ++ISG+ +G AVE+F M++
Sbjct: 259 GNSLIDLYAKIGSIQNSLRVFDEM-LDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRA 317
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++PN +F++VL AC H G V++ + F M ++ + P +HFGC++D+LGR+GRL E
Sbjct: 318 GIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLRE 377
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++IR+ P E +V+ +LLG C + ++GE K+ +E E FV+LSN+
Sbjct: 378 AEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTE 437
Query: 365 LGRWEDVGRIRQMINDRQLTK 385
L R+ D +R++++ R K
Sbjct: 438 LRRFSDAEIVRKLVDQRNSVK 458
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 158/319 (49%), Gaps = 12/319 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++TF ++ ACA + L G Q+H K+ SD + +L+ +Y CG L A +V
Sbjct: 550 PDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSV 609
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +++++WN++I G R + + LF+ + +EG K D T ++S ++LG
Sbjct: 610 FDEMV-VKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGD 668
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT- 187
A + ++ + + +++ L+ ++ ++ K ++ T
Sbjct: 669 YSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNM------KVRNIVTM 722
Query: 188 -ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A+I+ Y K AR+ FDQ I D W++MISGY + + A+EIF MQ+ K
Sbjct: 723 NAMIAAYAKGQDIVSARKIFDQ--IPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAK 780
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP++ +V+S+C H G +D + + + +K ++D+ + G EA
Sbjct: 781 VKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRN-NIKADTIMENSLIDMYMKCGSAKEA 839
Query: 307 RELIRELPEPTVSVYHSLL 325
++ +E+ E ++S++
Sbjct: 840 LQVFKEMKEKDTLSWNSII 858
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 112/228 (49%), Gaps = 7/228 (3%)
Query: 104 LAHEGFK----PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
AH+ F P WN +I G +Q +A ++K Q GMVP +L ACA
Sbjct: 504 FAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACA 563
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
++AL G++ H H+ + L D ++ +LI +Y CG +AR FD+ +K D W
Sbjct: 564 RINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK--DVVSW 621
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N++I GY + ++ + +F LMQ E VK + + + V+SAC G A + + +
Sbjct: 622 NSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI-E 680
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
D+ ++ +VD GR G+L A ++ + + ++++ A
Sbjct: 681 DYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 728
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+AH+ F P W++++ +S +A +LF + T L ACA L
Sbjct: 46 IAHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKACAGLGW 104
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+ + HG V+R + TAL+++Y+ CG + +R F++ +K + WN +I
Sbjct: 105 PRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVK--NAVSWNVVI 162
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+G+ GE E A +F+ M V S AC +A+ +F M + G+
Sbjct: 163 TGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPV----EAVALFRRMMAE-GI 217
Query: 284 KPKQEHFGCMVDLLGRSGRL 303
P + +V L G++
Sbjct: 218 SPSEITVLAVVPALSNVGKI 237
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 42/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTFI++++ +SL + Q+H L LK + D I AL+ Y K G + +
Sbjct: 304 PNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEI 363
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R+ ++WN+MI+G + N KAM+L W M Q G
Sbjct: 364 FSRMSERRDEVSWNSMISGYIHNELLCKAMDL--------------VWLMM-----QRGQ 404
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
R + F +VLSACA ++ L+ G E H IRA L D + +A
Sbjct: 405 RLDCFTF----------------ATVLSACATVATLECGMEVHACAIRACLESDVVIGSA 448
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG+ +A RFF+ ++ + WN+MISGY R+G ++A+ +F M+
Sbjct: 449 LVDMYSKCGRIDYASRFFNLMPVR--NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQL 506
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC H G VD+ + F M + +GL P+ EH+ CMVDLLGR+G LD+
Sbjct: 507 PDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIEN 566
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLN---SDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
I ++P +P + ++ ++LGAC C N ++LG A L M+P+N +V+LSN+YA
Sbjct: 567 FINKMPIKPNILIWRTVLGAC-CRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYAS 625
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G+WED+ R R+ + + + K G S
Sbjct: 626 GGKWEDMARTRRAMREAAVKKEAGCS 651
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 142/310 (45%), Gaps = 42/310 (13%)
Query: 9 PNSVTFISVISACA-SLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
PN F S I AC S+L+ + GRQVHG ++ + +G L++MY KCG + A
Sbjct: 99 PNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHAR 158
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+VF G+M++ D +WNSMI+G Q
Sbjct: 159 SVF-----------------GLMVD-------------------KDSVSWNSMITGLDQN 182
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A K + M+ TG++PS + S LS+CA L + LG++THG I+ L+ D S++
Sbjct: 183 KCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVS 242
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES-AVEIFDLMQQE 245
L+++Y + + + ++ F + D WN +I +G S A+E+F M +
Sbjct: 243 NTLLALYAETSRLAECQKVFSW--MLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRA 300
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
PN +F+ +L+ + QI ++ + +K ++ G+SG ++
Sbjct: 301 GWSPNRVTFINLLATVSSLSTSKLSHQIHALI-LKYNVKDDNAIENALLACYGKSGEMEN 359
Query: 306 ARELIRELPE 315
E+ + E
Sbjct: 360 CEEIFSRMSE 369
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 13/250 (5%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRFEAFKLFEKM 139
NT+I + G A +LF+ + PD TW +ISG++Q GM +A + ++M
Sbjct: 39 NTLINVYVRIGDCVSARKLFDEM------PDRNGVTWACLISGYTQNGMPEDACGVLKEM 92
Query: 140 QSTGMVPSLKCVTSVLSACAD-LSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCG 197
G +P+ S + AC + + + G++ HG+ IR LN + ++ LI+MY KCG
Sbjct: 93 IFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCG 152
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
AR F K D WN+MI+G +N +E AV+ ++ M++ + P++ + ++
Sbjct: 153 DIDHARSVFGLMVDK--DSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISA 210
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
LS+C G + Q GL ++ L + RL E +++ + E
Sbjct: 211 LSSCASLGCILLGQQTHG-EGIKLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERD 269
Query: 318 VSVYHSLLGA 327
+++++GA
Sbjct: 270 QVSWNTVIGA 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 15/162 (9%)
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRN 229
H +V++ + D + LI++Y++ G AR+ FD+ PD + W +ISGY +N
Sbjct: 23 HLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEM---PDRNGVTWACLISGYTQN 79
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA------GHVDKALQIFTMMDDDFGL 283
G E A + M E PN +F + + AC + G I T ++D
Sbjct: 80 GMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLND---- 135
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
K ++++ + G +D AR + + + ++S++
Sbjct: 136 -AKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMI 176
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 210/379 (55%), Gaps = 8/379 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +V+ C S + G Q+H T+ S + ALV MY KCG + A++ F EL
Sbjct: 349 TLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAF-EL 407
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+I++W MI G EKA E F+ + + +WNSM++ + Q G E
Sbjct: 408 MPIRDIISWTAMITAFSQAGDVEKAREYFDKMPER----NVISWNSMLATYMQRGYWEEG 463
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
K++ +M G+ ++ +SACADL+ L LG + + + + S+A ++++M
Sbjct: 464 LKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTM 523
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y +CGQ A++ F +K + WNAM++GY +NG+ +EIF+ M P+
Sbjct: 524 YSRCGQIEEAQKMFSSIVMK--NLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQI 581
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
S+V+VLS C H+G V + F M D G+ P EHF CMVDLLGR+G+L++A+ LI +
Sbjct: 582 SYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQ 641
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P +P +++ +LL AC H N+ L E L E++ E P + +L+NIY+ G+ + V
Sbjct: 642 MPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGV 701
Query: 372 GRIRQMINDRQLTKLPGIS 390
+R+++ D+ + K PG S
Sbjct: 702 TNVRKLMRDKGVRKNPGCS 720
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 157/341 (46%), Gaps = 37/341 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
+ I A SL YL+ Q+HG K + DT + T+++DMY+KCG + A VF
Sbjct: 119 ATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNP 178
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++ WN+MI G G +KA+ELF + D +WN+MIS SQ G E
Sbjct: 179 -SLFCWNSMIYGYSKYGSVKKALELFAKMPER----DTVSWNTMISILSQHGFGAETLNT 233
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
F +M + G P+ SVLSAC + L+ G H ++R + D LI MY K
Sbjct: 234 FLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAK 293
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG+ AR+ FD + + W ++I G + G E A+ +F+ M++ V + +
Sbjct: 294 CGRLESARQVFDG--LTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLA 351
Query: 256 AVLSAC-----------GHAGHVDKALQ--------IFTMM---------DDDFGLKPKQ 287
VL C HA + + L + TM + F L P +
Sbjct: 352 TVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR 411
Query: 288 E--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ + M+ ++G +++ARE ++PE V ++S+L
Sbjct: 412 DIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLA 452
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 42/270 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS+T+ SV+SAC S+ L++G +H +++E D G L+DMY KCG L A
Sbjct: 243 RPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQ 302
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L N ++W ++I G+ +Q G
Sbjct: 303 VFDGLT-EHNAVSWTSLIGGV-----------------------------------AQAG 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA LF +M+ + + +VL C + +G++ H H I L+ +A
Sbjct: 327 FQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVAN 386
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++MY KCG A F+ I+ D W AMI+ + + G+ E A E FD M + V
Sbjct: 387 ALVTMYAKCGDVWKANHAFELMPIR--DIISWTAMITAFSQAGDVEKAREYFDKMPERNV 444
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM 277
S+ ++L+ G+ ++ L+++ M
Sbjct: 445 ----ISWNSMLATYMQRGYWEEGLKVYIQM 470
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 159/350 (45%), Gaps = 67/350 (19%)
Query: 11 SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
S F + CASL + R++H + + +S + L++MY CG + A+ VF
Sbjct: 4 SQKFYESMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFG 63
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+ N+ +WNTMI+G +G+ +A +LFE + D +WNSM+SG+ G
Sbjct: 64 GIMFP-NVYSWNTMISGFADSGQMREAEKLFEKMPER----DSVSWNSMMSGYFHNG--- 115
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
++++T + A L LKL + HG + D D + T+++
Sbjct: 116 -------ELEAT------------IKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVL 156
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQ----- 244
MY+KCG +A++ F + P+ F WN+MI GY + G + A+E+F M +
Sbjct: 157 DMYIKCGAMDFAQKVFCR---TPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVS 213
Query: 245 --------------------------EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
+ +PNS ++ +VLSAC ++ + +
Sbjct: 214 WNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARI- 272
Query: 279 DDFGLKPKQEHF-GC-MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
++P + + GC ++D+ + GRL+ AR++ L E + SL+G
Sbjct: 273 --VRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIG 320
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 208/383 (54%), Gaps = 41/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS+T ++++ AC+ + L+ G+Q+H +++ D I AL+DMY KCG L A ++
Sbjct: 377 PNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSI 436
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F SEK D ++N++I G+SQ
Sbjct: 437 FD----------------------LSEK---------------DDVSYNTLILGYSQSPW 459
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
FE+ LF+++ S G+ L+AC +LS+ K GKE HG ++R L+ +A
Sbjct: 460 SFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANT 519
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y K G A + F++ IK D A WN MI GYG +G+ ++A +FDLM+ V
Sbjct: 520 LLGLYTKGGMLDTASKIFNR--IKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVT 577
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ S++AVLS C H G V++ + F+ M L+P+Q H+ CMVDLLGRSG+L E+ E
Sbjct: 578 YDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLTESVE 636
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I ++P V+ +LLGAC H N +L + A L E++PE+ + +L N+YA GR
Sbjct: 637 IILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGR 696
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + +IR ++ R++ K P S
Sbjct: 697 WNEAHKIRTLMKSRKVQKNPAYS 719
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 40/317 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S+T S++ A L Y GR+VHG ++K + D + +LVDMY K G L A V
Sbjct: 276 PGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F++++ RN+++WN MIA ++ NG
Sbjct: 336 FEKIE-VRNVVSWNAMIANLVQNGAES--------------------------------- 361
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF L KMQ G P+ + ++L AC+ +++LK GK+ H IR L D ++ A
Sbjct: 362 --EAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNA 419
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCGQ A+ FD + D +N +I GY ++ ++ +F + ++
Sbjct: 420 LIDMYAKCGQLRLAQSIFD---LSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIE 476
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
++ SF+ L+AC + + +I ++ L ++ L + G LD A +
Sbjct: 477 YDAISFMGALTACTNLSSFKQGKEIHGVLVRRL-LSNHPFLANTLLGLYTKGGMLDTASK 535
Query: 309 LIRELPEPTVSVYHSLL 325
+ + E V+ +++++
Sbjct: 536 IFNRIKEKDVASWNNMI 552
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 137/316 (43%), Gaps = 40/316 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N + +SV+ AC FG VHGL LK S +G ALVDMY K G +
Sbjct: 176 NVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHV------- 228
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E +M++FEG+ + +WNS I F G+
Sbjct: 229 -------------------------EASMKVFEGMPER----NEVSWNSAIGCFLNAGLY 259
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ LF M G +P ++S+L A +L LG+E HG+ I+ + D +A +L
Sbjct: 260 GDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSL 319
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY K G A F++ E++ + WNAMI+ +NG A + MQ++ P
Sbjct: 320 VDMYAKFGSLEKACAVFEKIEVR--NVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECP 377
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
NS + V +L AC + QI GL ++D+ + G+L A+
Sbjct: 378 NSITLVNLLPACSRMASLKTGKQIHA-WSIRTGLMFDLFISNALIDMYAKCGQLRLAQS- 435
Query: 310 IRELPEPTVSVYHSLL 325
I +L E Y++L+
Sbjct: 436 IFDLSEKDDVSYNTLI 451
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 118/249 (47%), Gaps = 11/249 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E ++++F+ ++AC +L + G+++HG+ ++ + + L+ +Y K G L A
Sbjct: 476 EYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASK 535
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +K +++ +WN MI G ++G+ + A LF+ + G D ++ +++S S G
Sbjct: 536 IFNRIK-EKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGG 594
Query: 128 MRFEAFKLFEKMQSTGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ K F M + + P C+ +L L+ E+ ++ + +
Sbjct: 595 LVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLT------ESVEIILDMPFHANSD 648
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A+ D FE+KP+ +++ + + Y G + A +I LM+
Sbjct: 649 VWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYAEAGRWNEAHKIRTLMK 708
Query: 244 QEKVKPNSA 252
KV+ N A
Sbjct: 709 SRKVQKNPA 717
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 114/300 (38%), Gaps = 47/300 (15%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G ++H L+ +D G LV Y CG A VF E+
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPAR-------------- 140
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
D +WNS++S F M +A + M +G+ ++
Sbjct: 141 ----------------------DVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVA 178
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
+ SV+ AC G HG V++ L+ ++ AL+ MY K G + + F+
Sbjct: 179 SLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEG- 237
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ + WN+ I + G Y + +F M + P S + ++L A G+ D
Sbjct: 238 -MPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDL 296
Query: 270 ALQIFTMMDDDFGLKPKQEH----FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + +K E +VD+ + G L++A + ++ V +++++
Sbjct: 297 GREV-----HGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMI 351
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G E H +R+ D L++ Y CG ARR FD E+ D WN+++S +
Sbjct: 95 GLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD--EMPARDVVSWNSLVSSF 152
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
N ++ A + M + V N AS V+V+ ACG L + ++ GL
Sbjct: 153 LANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKT-GLDSI 211
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+VD+ G+ G ++ + ++ +PE ++S +G C LN+ L ++ +
Sbjct: 212 VNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIG---CFLNAGLYGDVLALFRG 268
Query: 347 MEPENPTP-FVILSNIYAGLGR--WEDVGR 373
M P + LS++ L + D+GR
Sbjct: 269 MSERGFMPGSITLSSLLPALVELGYFDLGR 298
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/382 (36%), Positives = 211/382 (55%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T +V+ + ASL ++ +Q+H +++K SD + +L+D Y KC + A +F
Sbjct: 384 NQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIF 443
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E TW ++A + SMI+ +SQ G
Sbjct: 444 EER-------TWEDLVA-----------------------------YTSMITAYSQYGDG 467
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KL+ +MQ + P +S+L+ACA+LSA + GK+ H H I+ D + +L
Sbjct: 468 EEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSL 527
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG A R F EI W+AMI GY ++G + A+ +F+ M ++ V P
Sbjct: 528 VNMYAKCGSIEDADRAFS--EIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPP 585
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V+VL AC HAG V++ Q F M+ FG+KP QEH+ CM+DLLGRSG+L+EA EL
Sbjct: 586 NHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVEL 645
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ +P E V+ +LLGA H N +LG++ A L ++EPE V+L+NIYA G W
Sbjct: 646 VNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMW 705
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E+V ++R+ + D ++ K PG+S
Sbjct: 706 ENVAKVRKFMKDSKVKKEPGMS 727
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 166/363 (45%), Gaps = 42/363 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN + +++ACA L GR++HGL LK+ D ALVDMY K G + A V
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ++ ++++WN +IAG +L+ ++ A+ L + + G +P+ T
Sbjct: 241 FQDI-AHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFT------------- 286
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++S L ACA + +LG++ H +I+ D + D A
Sbjct: 287 ----------------------LSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVG 324
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KC ARR +D K D WNA+ISGY + G++ AV +F M E +
Sbjct: 325 LVDMYSKCEMMDDARRAYDSMPKK--DIIAWNALISGYSQCGDHLDAVSLFSKMFSEDID 382
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N + VL + + QI T+ G+ ++D G+ +DEA +
Sbjct: 383 FNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-GIYSDFYVINSLLDTYGKCNHIDEASK 441
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI--LSNIYAGLG 366
+ E + Y S++ A + + + ++ +++Q+ + + P PF+ L N A L
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIK-PDPFICSSLLNACANLS 500
Query: 367 RWE 369
+E
Sbjct: 501 AYE 503
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 51/325 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T S + ACA++ + + GRQ+H +K++ SD LVDMY KC + A
Sbjct: 281 RPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARR 340
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + K D WN++ISG+SQ G
Sbjct: 341 AYDSMP------------------------------------KKDIIAWNALISGYSQCG 364
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF KM S + + +++VL + A L A+K+ K+ H I++ + D +
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ Y KC A + F+ E +D + +MI+ Y + G+ E A++++ MQ +
Sbjct: 425 SLLDTYGKCNHIDEASKIFE--ERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADI 482
Query: 248 KPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
KP+ ++L+AC + ++ Q+ F M D F +V++ + G
Sbjct: 483 KPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNS-------LVNMYAKCG 535
Query: 302 RLDEARELIRELPEPTVSVYHSLLG 326
+++A E+P + + +++G
Sbjct: 536 SIEDADRAFSEIPNRGIVSWSAMIG 560
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 151/330 (45%), Gaps = 46/330 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF SV+ AC+ L GR+VHG+ + +SD + LV MY KCG L
Sbjct: 81 NEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLL------- 133
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + LF G+ + +WN++ S + Q +
Sbjct: 134 -------------------------DDSRRLFGGIVER----NVVSWNALFSCYVQSELC 164
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF++M +G++P+ ++ +L+ACA L LG++ HG +++ L+ D+ A AL
Sbjct: 165 GEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANAL 224
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY K G+ A F +I D WNA+I+G + + A+ + D M+ +P
Sbjct: 225 VDMYSKAGEIEGAVAVFQ--DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRP 282
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEAR 307
N + + L AC G + Q+ + + + + F +VD+ + +D+AR
Sbjct: 283 NMFTLSSALKACAAMGFKELGRQLHSSL---IKMDAHSDLFAAVGLVDMYSKCEMMDDAR 339
Query: 308 ELIRELPEPTVSVYHSLLGA---CWCHLNS 334
+P+ + +++L+ C HL++
Sbjct: 340 RAYDSMPKKDIIAWNALISGYSQCGDHLDA 369
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 6/251 (2%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L E + D +W+S++SG+ Q G EA +F +M G+ + SVL AC+
Sbjct: 38 LVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRD 97
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L +G++ HG + D +A L+ MY KCG +RR F I + WNA+
Sbjct: 98 LNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGG--IVERNVVSWNALF 155
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
S Y ++ AV +F M + + PN S +L+AC D +I +M GL
Sbjct: 156 SCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLM-LKMGL 214
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
Q +VD+ ++G ++ A + +++ P V +++++ C H +DL M
Sbjct: 215 DLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLA---LML 271
Query: 344 LQEMEPENPTP 354
L EM+ P
Sbjct: 272 LDEMKGSGTRP 282
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 120/250 (48%), Gaps = 20/250 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ S+++ACA+L + G+Q+H +K D +LV+MY KCG + A
Sbjct: 483 KPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADR 542
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ +R I++W+ MI G +G ++A+ LF + +G P+ T S++ + G
Sbjct: 543 AFSEIP-NRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAG 601
Query: 128 MRFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADLS-ALKLGK----ETHGHVIRAD 178
+ E + FEKM+ G+ P+ C+ +L L+ A++L E G V A
Sbjct: 602 LVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGAL 661
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L A I ++ GQ + A+ FD ++P+ + + Y G +E+ ++
Sbjct: 662 L------GAARIHKNIELGQKA-AKMLFD---LEPEKSGTHVLLANIYASAGMWENVAKV 711
Query: 239 FDLMQQEKVK 248
M+ KVK
Sbjct: 712 RKFMKDSKVK 721
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E H H+I+ ++D S+ L+++Y KC + +AR+ D E D W++++SGY +
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVD--ESSELDVVSWSSLLSGYVQ 59
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG E A+ +F+ M VK N +F +VL AC ++ ++ M G +
Sbjct: 60 NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVT-GFESDGF 118
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+V + + G LD++R L + E V +++L C++ S+L E +EM
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFS---CYVQSELCGEAVGLFKEMV 175
Query: 349 PENPTP----FVILSNIYAGLGRWEDVGR 373
P I+ N AGL + D+GR
Sbjct: 176 RSGIMPNEFSISIILNACAGL-QEGDLGR 203
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 210/386 (54%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L + G+QVH ++++ +D + + L+D+Y KCG + A
Sbjct: 314 QPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALI 373
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F N++T + D WNSMISG +
Sbjct: 374 IF-------NMMT-----------------------------ERDVVCWNSMISGLAIHS 397
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF ++M+ GM P+ S+++ CA LS++ G++ H V++ +++ +
Sbjct: 398 LSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGC 457
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K G AR FF+ +K + WN MI GY +NG E AVE+F+ M K
Sbjct: 458 SLIDMYAKSGNMDDARLFFNCMIVK--NLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQ 515
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+S +F+AVL+ C H+G VD+A+ F M+ ++G+ P EH+ C++D L R+ R E
Sbjct: 516 KPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVE 575
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+I ++P +P ++ LL AC H N++LGE A L ++P+NP+P+V+LSNIYA
Sbjct: 576 AVIGKMPYKDDPI--LWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYAT 633
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R +++ R + K G S
Sbjct: 634 LGRHGDASAVRALMSSRGVVKGRGYS 659
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 47/337 (13%)
Query: 12 VTFISVISACASLLY--------LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
V SV+ ACA +Q + +H L ++ SD +G +LVD+Y K +
Sbjct: 143 VAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMD 202
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-------------- 109
A VF+ L S +I++WN +I G G E+AME+ E + GF
Sbjct: 203 EAIKVFESLS-SVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASC 261
Query: 110 -----------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
KP TWN+++SG+ Q + E LF +MQ + P +
Sbjct: 262 IKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 321
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+LS+C+ L +LGK+ H +R L+ D +A+ LI +Y KCGQ A F+ +
Sbjct: 322 VILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER 381
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN+MISG + E A + M++ + P +S+ ++++ C + + Q
Sbjct: 382 --DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQ 439
Query: 273 IFT-MMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAR 307
+ ++ D + + + GC ++D+ +SG +D+AR
Sbjct: 440 MHAQVLKDGY---DQNVYVGCSLIDMYAKSGNMDDAR 473
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 152/344 (44%), Gaps = 55/344 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P + T SV+SAC ++ L GR+ HGL +K+ + L+ MY KCG +
Sbjct: 39 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVA----- 93
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
A+ LF+G+ P+ ++ +M+ G +Q G
Sbjct: 94 ---------------------------DAVRLFDGMP----SPNEVSFTAMMGGLAQGGA 122
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------LSALKLGKETHGHVIRADLN 180
+A +LF +M TG+ V+SVL ACA A++L + H V+R
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 182
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D+ + +L+ +Y K + A + F+ + WN +I+GYG+ G YE A+E+ +
Sbjct: 183 SDQHVGNSLVDLYAKGMKMDEAIKVFE--SLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
MQ+ +PN ++ +L++C A V A +F + KP + ++ G+
Sbjct: 241 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIP-----KPSVTTWNTLLSGYGQE 295
Query: 301 GRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEM 340
E +L R + +P + +L +C N +LG+++
Sbjct: 296 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQV 339
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 139/284 (48%), Gaps = 29/284 (10%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+ +WN++I+ ++ G EA ++++ M G+ P+ + SVLSAC ++AL G+ H
Sbjct: 5 NAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCH 64
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
G ++ L+ + + L+ MY KCG + A R FD P++ +F AM+ G + G
Sbjct: 65 GLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMP-SPNEVSF-TAMMGGLAQGGA 122
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHA----GHVDKALQIFT-----MMDDDFG 282
+ A+ +F M + ++ + + +VL AC A +V +A+Q+ ++ FG
Sbjct: 123 VDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 182
Query: 283 LKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL---GACWCHLNSDLGE 338
+H G +VDL + ++DEA ++ L ++ ++ L+ G C+
Sbjct: 183 ---SDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCY------- 232
Query: 339 EMAMKLQEMEPEN---PTPFVILSNIYAGLGRWEDVGRIRQMIN 379
E AM++ E E+ P V SN+ A + DV R M +
Sbjct: 233 ERAMEVLEFMQESGFEPNE-VTYSNMLASCIKARDVPSARAMFD 275
>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/398 (34%), Positives = 208/398 (52%), Gaps = 51/398 (12%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D P+ TF +I A + L L G+ HG+ +K+ SD I +L+ Y KCG L +
Sbjct: 132 DFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGY 191
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + D +WNSMI+ F Q
Sbjct: 192 RVFVNXP------------------------------------RRDVVSWNSMITAFVQG 215
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA +LF++M++ + P+ + VLSACA S + G+ H ++ R + + +++
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLS 275
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA----------- 235
A++ MY KCG A+R FD+ K D W M+ GY + GEY++A
Sbjct: 276 NAMLDMYTKCGSVEDAKRLFDKMPEK--DIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKD 333
Query: 236 -VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+ +F MQ++KVKPN+ +F +L AC H G V++ F M+ +G+ P +H+ CMV
Sbjct: 334 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 393
Query: 295 DLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
D+LGR+G L+EA ELI ++P P SV+ +LLGAC H N L E+ +L E+EP N
Sbjct: 394 DILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHG 453
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+V+LSNIYA G+W+ V +R+++ D L K PG S+
Sbjct: 454 AYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSS 491
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 97 AMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVL 155
A ++F+ + H P+ TWN++I ++ ++ +F +M + P ++
Sbjct: 88 AQQVFDQIPH----PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLI 143
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
A ++L L GK HG VI+ L D + +LI Y KCG+ R F + D
Sbjct: 144 KAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRR--D 201
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN+MI+ + + G E A+E+F M+ + VKPN + V VLSAC + + +
Sbjct: 202 VVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHS 261
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ + + M+D+ + G +++A+ L ++PE + + ++L
Sbjct: 262 YIERN-RIXESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTML 310
>gi|115445617|ref|NP_001046588.1| Os02g0290000 [Oryza sativa Japonica Group]
gi|47847947|dbj|BAD21737.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536119|dbj|BAF08502.1| Os02g0290000 [Oryza sativa Japonica Group]
Length = 930
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 219/383 (57%), Gaps = 11/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT +++I ++ ++ ++ HG +L++ D+ + A++D Y KCG L A +F
Sbjct: 506 DSVTILNIIRM-STFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLF 564
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ L G RNI+T NTMI+ + N E A F +A + D TWN M ++Q +
Sbjct: 565 RSLAG-RNIVTGNTMISCYLKNNCVEDAEMTFNHMA----EKDLTTWNLMSRLYAQNDLC 619
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+AF LF ++QS G+ P +T++LSAC LS+++L K+ HG+++RA L +D + AL
Sbjct: 620 DQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGAL 678
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ Y KCG + A F Q + D F AMI Y +G E AVE+F M +KP
Sbjct: 679 LDAYSKCGNIANAYNLF-QVSLHKDLVIF-TAMIGAYAMHGMAEKAVELFSKMLTLDIKP 736
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ A+LSAC HAG VD ++IF + + +G++P +EH CMVDLL RSGRL +A
Sbjct: 737 DHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSF 796
Query: 310 IRELPEPTV--SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++P V + + SLLGAC H +G+ A +L ME E+ +VI+SNI+A +
Sbjct: 797 ALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDK 856
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +R+++ + + K G S
Sbjct: 857 WESVEHVRKLMKSKDMKKPAGCS 879
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 46/326 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +VT V+ CA L L+ GR +HG +K + DT+ G ALV MY KCG
Sbjct: 196 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCG-------- 247
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP----DPATWNSMISGFS 124
AM+ AH F D +WNS+I+G+S
Sbjct: 248 -------------------------GSIAMDD----AHLAFSTICCKDVVSWNSIIAGYS 278
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ G+ EA LF +M S +P+ + +VL C+ + GKE HG V+R L D
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S++ AL++ Y K + F K D WN +I+GY N A+++F +
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSS--KMGDIVTWNTVIAGYVMNRYPSRALKLFQGLL 396
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ P+S S +++L+AC G++ +++ + L + +V + R
Sbjct: 397 FAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 456
Query: 304 DEA-RELIRELPEPTVSVYHSLLGAC 328
D A R I + +VS ++++L AC
Sbjct: 457 DAAFRSFITIQNKDSVS-WNAILSAC 481
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 110/255 (43%), Gaps = 43/255 (16%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
GR +HGL +K+ ++ A++DMY + G L AH VF E+ S
Sbjct: 112 LGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLADAHTVFDEMSCS------------- 158
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM---V 145
D N +I+ S+ G+ + F LF M ++G+ +
Sbjct: 159 -----------------------DAVCRNILITASSRAGLYNDVFHLFRAMLASGVDESM 195
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
P+ V VL CA L L+ G+ HG+VI+ L D AL+SMY KCG
Sbjct: 196 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCGGSIAMDDA 255
Query: 206 FDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG-- 262
F I D WN++I+GY NG +E A+ +F M E+ PN ++ VL C
Sbjct: 256 HLAFSTICCKDVVSWNSIIAGYSENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLV 315
Query: 263 -HAGHVDKALQIFTM 276
+ H K + F +
Sbjct: 316 EYGRHYGKEIHGFVV 330
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 61/371 (16%)
Query: 2 KECLSDEPNSVTFISVISACASLLY-LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ECL PN T +V+ C+ + Y +G+++HG ++ + D + AL+ Y K
Sbjct: 296 EECL---PNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVC 352
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ ++F RS K D TWN++I
Sbjct: 353 EMRAVESIF-----------------------RSSK-------------MGDIVTWNTVI 376
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADL 179
+G+ A KLF+ + GM P + S+L+ACA + L++G HG++ R +L
Sbjct: 377 AGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPEL 436
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEI 238
++ S+ AL+S Y +C + A R F I+ D WNA++S + + E +
Sbjct: 437 LQETSLMNALVSFYSQCDRFDAAFRSF--ITIQNKDSVSWNAILSACANSEHHIEQFFRL 494
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------C 292
M + + +S + + ++ G M+ + G + + G
Sbjct: 495 LGEMWHDVTQWDSVTILNIIRMSTFCG--------IKMVQESHGYSLRVGYTGDSSVANA 546
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
++D + G L +A L R L + ++++ C+L ++ E+ M M ++
Sbjct: 547 ILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMIS---CYLKNNCVEDAEMTFNHMAEKDL 603
Query: 353 TPFVILSNIYA 363
T + ++S +YA
Sbjct: 604 TTWNLMSRLYA 614
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 159/393 (40%), Gaps = 77/393 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SV+ IS+++ACA + L+ G +VHG + E +T + ALV Y +C A
Sbjct: 402 PDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFR 461
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ +++ ++WN +++ SE +E F L E + D W+S+
Sbjct: 462 SFITIQ-NKDSVSWNAILSAC---ANSEHHIEQFFRLLGEMWH-DVTQWDSV-------- 508
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ + + + C +K+ +E+HG+ +R D S+A
Sbjct: 509 -------------------TILNIIRMSTFC----GIKMVQESHGYSLRVGYTGDSSVAN 545
Query: 188 ALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAF 218
A++ Y KCG A F + D
Sbjct: 546 AILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTT 605
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN M Y +N + A +F +Q E + P++ S +LSAC H V Q M
Sbjct: 606 WNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYM- 664
Query: 279 DDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
L+ E G ++D + G + A L + + ++ +++GA H ++
Sbjct: 665 ----LRASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAE 720
Query: 336 LGEEMAMKL--QEMEPENPTPFVILSNI-YAGL 365
E+ K+ +++P++ +LS +AGL
Sbjct: 721 KAVELFSKMLTLDIKPDHVVLTALLSACSHAGL 753
>gi|357503973|ref|XP_003622275.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355497290|gb|AES78493.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 541
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 218/389 (56%), Gaps = 14/389 (3%)
Query: 9 PNSVTFISVISACASLLYL-QFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN++TF ++ C+ L Y G +H LK +D +G +L+ +++ G A
Sbjct: 126 PNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARK 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R++++WN+M+ G + NG E A+ LF + + TWNS+I+G Q G
Sbjct: 186 VFDEM-FVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGR----NIITWNSIITGLVQAG 240
Query: 128 MRFEAFKLFEKMQSTG----MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E+ ++F +MQ + P + SVLSACA L ++ GK H ++ + D+ D
Sbjct: 241 HAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDV 300
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ TAL++MY KCG A F+ ++ D + W AMIS + +G + A + F M+
Sbjct: 301 VIGTALVNMYGKCGDVQQAIEIFN--DMPEKDASAWTAMISVFALHGFGKKAFDCFLEME 358
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ VKPN +FV +LSAC H+G V++ F +M + ++P+ H+ CMVD+L R+
Sbjct: 359 KAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLF 418
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
DEA LIR +P +P V V+ +LLG C H N LGE++A L ++EP N ++ L +IY
Sbjct: 419 DEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIY 478
Query: 363 AGLGRWEDVGRIRQMINDRQL-TKLPGIS 390
G+++ RIR + +R + TK+PG S
Sbjct: 479 VKAGKYDAAKRIRNSMKERGIETKIPGCS 507
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T SV+SACA L + G+ VH K + + D +IGTALV+MY KCG + A
Sbjct: 262 KPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIE 321
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++ W MI+ L+G +KA + F + G KP+ T+ ++S S G
Sbjct: 322 IFNDMP-EKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSG 380
Query: 128 MRFEAFKLFEKMQSTGMV-PSL---KCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + F+ M+ + P + C+ +LS +L E + + D
Sbjct: 381 LVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRA------RLFDEALFLIRSMPMKPDV 434
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ G + +++P + AF+ + Y + G+Y++A I + M
Sbjct: 435 YVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCDIYVKAGKYDAAKRIRNSM 494
Query: 243 QQEKVK 248
++ ++
Sbjct: 495 KERGIE 500
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 213/392 (54%), Gaps = 19/392 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T S++ AC L R VH +K S + T LVD Y + G + A
Sbjct: 118 QPNAFTLSSLLKACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQK 173
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++++ M+ +G +A LFEG+ G K D WN MI G++Q G
Sbjct: 174 LFDAMP-ERSLVSYTAMLTCYAKHGMLPEARVLFEGM---GMK-DVVCWNVMIDGYAQHG 228
Query: 128 MRFEAFKLFEKMQSTG-------MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
EA F KM + P+ V +VLS+C + AL+ GK H +V +
Sbjct: 229 CPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIK 288
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + TAL+ MY KCG AR+ FD E K D WN+MI GYG +G + A+++F
Sbjct: 289 VNVRVGTALVDMYCKCGSLEDARKVFDVMEGK--DVVAWNSMIMGYGIHGFSDEALQLFH 346
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M VKP+ +FVAVL+AC HAG V K ++F M D +G++PK EH+GCMV+LLGR+
Sbjct: 347 EMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRA 406
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
GR+ EA +L+R + EP ++ +LL AC H N LGEE+A L + +V+LS
Sbjct: 407 GRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLS 466
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
N+YA W V ++R M+ + K PG S+
Sbjct: 467 NMYAAARNWVGVAKVRSMMKGSGVEKEPGCSS 498
>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
mitochondrial-like [Vitis vinifera]
Length = 610
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 216/385 (56%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ F ++ ACA L ++ G+QVH + D ++ ++LVDMY KCG
Sbjct: 102 QPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRV 161
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + S+N ++W MI+G +GR A++LF+ + + +W ++ISG Q G
Sbjct: 162 VFDSI-SSKNSISWTAMISGYAQSGRKLDAIQLFQKMPVKNL----LSWTALISGLVQSG 216
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
++F LF +M+S G+ + ++S++ A A+L+ L LGK+ H VI ++
Sbjct: 217 NWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVS 276
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KC A++ F + + D W ++I G ++G E A+ +++ M
Sbjct: 277 NALVDMYAKCSDVLAAKKIFGRMVQR--DIVSWTSIIVGTAQHGLAEEALSLYNRMLSTG 334
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KPN +FV ++ AC H G V K F M D+G+ P +H+ C++DLL RSG L+EA
Sbjct: 335 LKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEA 394
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
LI+ +P +P + + +LL AC H N+ +G +A L ++PE+P+ +++LSNIYA
Sbjct: 395 ENLIKAMPFKPDEATWAALLSACNHHRNTLIGIRVADHLLSLKPEDPSTYILLSNIYASA 454
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
WE V ++R+++ ++ K PG S
Sbjct: 455 AMWESVSKVRRLMAAMEVKKEPGYS 479
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 43/261 (16%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ ACA G+++H +K + L++MY KCG +
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLI--------------- 54
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
+ A+ LF L H DP +W S+++ +Q + +F
Sbjct: 55 -----------------QDALNLFNQLPHR----DPISWASILTANNQANLPHLTLSMFP 93
Query: 138 KM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M + G+ P ++ ACA L A+K GK+ H I + ++ D+ + ++L+ MY KC
Sbjct: 94 AMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKC 153
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G P R FD I + W AMISGY ++G A+++F Q+ VK N S+ A
Sbjct: 154 GLPDIGRVVFD--SISSKNSISWTAMISGYAQSGRKLDAIQLF---QKMPVK-NLLSWTA 207
Query: 257 VLSACGHAGHVDKALQIFTMM 277
++S +G+ + +F M
Sbjct: 208 LISGLVQSGNWVDSFYLFMEM 228
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L ACA + +GK+ H H+I+ +++ +S++ LI+MY KCG A F+Q +
Sbjct: 10 LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPHR-- 67
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLM-QQEKVKPNSASFVAVLSACGHAGHVDKALQ- 272
DP W ++++ + + +F M +Q+ ++P+ F ++ AC G + + Q
Sbjct: 68 DPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQV 127
Query: 273 ----IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
I + + DD +K +VD+ + G D R
Sbjct: 128 HATFIVSPVSDDDVVKSS------LVDMYAKCGLPDIGR 160
>gi|194696956|gb|ACF82562.1| unknown [Zea mays]
gi|413957085|gb|AFW89734.1| selenium-binding protein-like protein [Zea mays]
Length = 605
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 222/384 (57%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF ++ + L + Q+H L LK+ + T AL+ YL A
Sbjct: 98 RPDHFTFPQILPSAQPLHLVA---QLHALLLKLGFHAHTQSLNALLAAYLANARPDLASR 154
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ G+ ++++W TM+ G++ G + A LF+G+ +WN+M+SG+ +
Sbjct: 155 VFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNL----VSWNAMMSGYVKAC 210
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F++M++ G+ ++ + + AC AL G+E H V ++ + DE +AT
Sbjct: 211 RFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLAT 270
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG A R F+ + WN MI G+ +G E A+++F M++E V
Sbjct: 271 AVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGEDALKLFGRMEREGV 330
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V VL+AC HAG + + F + +G++PK EH+GCMVDL GR+GRL+EA+
Sbjct: 331 APDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAK 390
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++I+++P EP V V +L GA H + DLGE + ++ E++P+N +V+L+N+ A G
Sbjct: 391 KVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAG 450
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R+++++R ++K G S
Sbjct: 451 RWEDVARVRRLMDERNVSKEAGRS 474
>gi|125524780|gb|EAY72894.1| hypothetical protein OsI_00769 [Oryza sativa Indica Group]
Length = 569
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 221/389 (56%), Gaps = 9/389 (2%)
Query: 8 EPNSVTFISVISAC--ASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPC 64
E N+ + +SAC A L L G+ +HG +K + +L+ MY K G +
Sbjct: 142 EGNAESMAVALSACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDD 201
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISG 122
A F++ ++N +TWNT+I G ++A+++ + G P+ +W+++I G
Sbjct: 202 AKKAFRDAT-AKNTVTWNTLITSYAAAGLCDEALDVLAQMEQIGGTVAPNVVSWSAVIGG 260
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+ G A +LF +MQ + P++ + +VLSAC DL AL+LG+E HGH ++A+L++
Sbjct: 261 FASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRH 320
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ LI+MY KCG+ S AR+ FD +K D WN+M++GYG +G + A+ +F M
Sbjct: 321 SLVENGLINMYAKCGKVSGARKVFDG--MKTRDLISWNSMLAGYGMHGLCDEALALFTDM 378
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V+P+ +FVAVLSACGHAG V + ++F M + P EH+ CMV LLGR+G
Sbjct: 379 AGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGL 438
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L +A EL+ +P P + V+ +LL +C H ++ + E + + E ++ ++++N+
Sbjct: 439 LRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNL 498
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W++ ++R M + L K PG S
Sbjct: 499 YAMCGMWDESKKVRVMTKEAGLRKNPGQS 527
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 138/305 (45%), Gaps = 18/305 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T + A AS + H L L + Q D + ++ Y + G A V
Sbjct: 9 PNSYTLPLALRAAASP-RVASAVHAHALHLGLHAQHD--VAGQILAAYSRLGRAADARRV 65
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R WN +I+ + A + F +A G +PD TW +++S ++ G
Sbjct: 66 FDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGTRPDAVTWTALLSAHARSGK 125
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSAC---ADLSALKLGKETHG-HVIRADLNKDES 184
+ +LF +MQ +G + + + LSAC DL AL GK HG V++ ++
Sbjct: 126 HADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDL-ALAKGKAIHGCGVVKGLMHGYLF 184
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI MY K G+ A++ F K + WN +I+ Y G + A+++ M+Q
Sbjct: 185 VTNSLICMYGKLGEMDDAKKAFRDATAK--NTVTWNTLITSYAAAGLCDEALDVLAQMEQ 242
Query: 245 --EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLG 298
V PN S+ AV+ +G D+AL++F M + L P + VDLL
Sbjct: 243 IGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQW-LSPNVVTMATVLSACVDLLA 301
Query: 299 -RSGR 302
R GR
Sbjct: 302 LRLGR 306
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/420 (34%), Positives = 226/420 (53%), Gaps = 33/420 (7%)
Query: 1 MKECLS-------DE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTA 51
M ECL+ D+ P+ + ++ + + ++ G+ HGL ++ D + A
Sbjct: 317 MNECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNA 376
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAG-----MMLNGRSEK---AMELFEG 103
L+ MY K G L A +F + + +WNTM+ G ++ N E A L +
Sbjct: 377 LLSMYCKFGTLNPAEKLFDGVH-EWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDM 435
Query: 104 LAHEG-----------FKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
G + D TWN++IS ++ G EA LF++M S + P+ +
Sbjct: 436 YGKGGNLSIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLV 495
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
VLSAC L +L+ GK H ++ + S+ TAL+ MY KCGQ +R F+ +K
Sbjct: 496 IVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNS--MK 553
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN MISGYG +G+ SA+E+F M+Q VKPN+ +F+++LSAC HAG+VD+ Q
Sbjct: 554 EKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQ 613
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYHSLLGACWCH 331
+F M + +KP +HF CM DLLGRSG L EA +L++ +P P V+ +LL AC H
Sbjct: 614 LFDRM-QYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIH 672
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
++G +A E +PEN +++LSN+Y +G+W++ R R+++ +R + K G SA
Sbjct: 673 NEIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWSA 732
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 172/372 (46%), Gaps = 30/372 (8%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++ NS T AC +L + GR +HGL +K ++ ++L+ MY KCG + AH
Sbjct: 231 EKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAH 290
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
N F ++ +++ +W ++I G + + LF + + PD + ++ GF
Sbjct: 291 NSFCQVV-DKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGIVVSCILLGFGNS 349
Query: 127 GMRFEAFKLFEKM----------QSTGMVPSLKCVTSVLSACADL--SALKLGKET---- 170
M E K F + + S+ C L+ L + KE+
Sbjct: 350 MMVREG-KAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGVHEWSKESWNTM 408
Query: 171 -----HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
H ++I+ +++D S+A +LI MY K G S A + F + + D WN +IS
Sbjct: 409 VFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQ---RDVVTWNTLISS 465
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y +G Y A+ +FD M EK+ PNSA+ V VLSAC H ++K + + + G +
Sbjct: 466 YTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQYIKEG-GFEL 524
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
+VD+ + G+L+++REL + E V ++ ++ H +++ E+ Q
Sbjct: 525 NVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDANSAMEV---FQ 581
Query: 346 EMEPENPTPFVI 357
+ME N P I
Sbjct: 582 QMEQSNVKPNAI 593
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 23/269 (8%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ D WNS+I G F+AF + +M+ P+ + +++ CA+L L+ GK
Sbjct: 92 QKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKY 151
Query: 170 THGHVIRADLNKDES-MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
HG V ++ L + S + ++ + MY KCG A FD+ ++ D W A++ GY
Sbjct: 152 IHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVR--DVVSWTALVIGYVH 209
Query: 229 NGEYESAVEIFDLMQQ---EKVKPNSASFVAVLSACGH-----AGHVDKALQIFTMMDDD 280
N + E +E M++ + K NS + ACG+ AG L + T
Sbjct: 210 NDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKT----- 264
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC--WCHLNSDLGE 338
GL Q ++ + + G ++EA ++ + V + S++G C + +N L
Sbjct: 265 -GLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNL 323
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGR 367
M++ ++ P+ +++S I G G
Sbjct: 324 FWDMQVDDVYPDG----IVVSCILLGFGN 348
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/386 (33%), Positives = 210/386 (54%), Gaps = 43/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ++S+C+ L + G+QVH ++++ +D + + L+D+Y KCG + A
Sbjct: 415 QPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALI 474
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F N++T + D WNSMISG +
Sbjct: 475 IF-------NMMT-----------------------------ERDVVCWNSMISGLAIHS 498
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF ++M+ GM P+ S+++ CA LS++ G++ H V++ +++ +
Sbjct: 499 LSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGC 558
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K G AR FF+ +K + WN MI GY +NG E AVE+F+ M K
Sbjct: 559 SLIDMYAKSGNMDDARLFFNCMIVK--NLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQ 616
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+S +F+AVL+ C H+G VD+A+ F M+ ++G+ P EH+ C++D L R+ R E
Sbjct: 617 KPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVE 676
Query: 308 ELIRELP---EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+I ++P +P ++ LL AC H N++LGE A L ++P+NP+P+V+LSNIYA
Sbjct: 677 AVIGKMPYKDDPI--LWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYAT 734
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
LGR D +R +++ R + K G S
Sbjct: 735 LGRHGDASAVRALMSSRGVVKGRGYS 760
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 47/337 (13%)
Query: 12 VTFISVISACASLLY--------LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
V SV+ ACA +Q + +H L ++ SD +G +LVD+Y K +
Sbjct: 244 VAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMD 303
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF-------------- 109
A VF+ L S +I++WN +I G G E+AME+ E + GF
Sbjct: 304 EAIKVFESLS-SVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASC 362
Query: 110 -----------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
KP TWN+++SG+ Q + E LF +MQ + P +
Sbjct: 363 IKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLA 422
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+LS+C+ L +LGK+ H +R L+ D +A+ LI +Y KCGQ A F+ +
Sbjct: 423 VILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER 482
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN+MISG + E A + M++ + P +S+ ++++ C + + Q
Sbjct: 483 --DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQ 540
Query: 273 IFT-MMDDDFGLKPKQEHFGC-MVDLLGRSGRLDEAR 307
+ ++ D + + + GC ++D+ +SG +D+AR
Sbjct: 541 MHAQVLKDGY---DQNVYVGCSLIDMYAKSGNMDDAR 574
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 149/344 (43%), Gaps = 55/344 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P + T SV+SAC ++ L GR+ HGL +K+ + L+ MY KCG + A +
Sbjct: 140 PTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRL 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + S N +++ M+ G+ G + A+ LF ++ G + DP
Sbjct: 200 FDGMP-SPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVA------------- 245
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD--------LSALKLGKETHGHVIRADLN 180
V+SVL ACA A++L + H V+R
Sbjct: 246 ----------------------VSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFG 283
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D+ + +L+ +Y K + A + F+ + WN +I+GYG+ G YE A+E+ +
Sbjct: 284 SDQHVGNSLVDLYAKGMKMDEAIKVFE--SLSSVSIVSWNILITGYGQLGCYERAMEVLE 341
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
MQ+ +PN ++ +L++C A V A +F + KP + ++ G+
Sbjct: 342 FMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKIP-----KPSVTTWNTLLSGYGQE 396
Query: 301 GRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEM 340
E +L R + +P + +L +C N +LG+++
Sbjct: 397 ELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQV 440
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 40/368 (10%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC-AHNVFQELKGSRNILTWNTMIAGMM 89
+ H L +DT + LV++Y G LPC A F+ L N+ ++N I+
Sbjct: 30 KAAHARVLAAGLAADTFLLNRLVELYSLSG-LPCHALRAFRALP-HPNVYSYNAAISAAC 87
Query: 90 LNGRSEKAMELFEGLAHEGFKPD--PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
G A +L G PD +WN++I+ ++ G EA ++++ M G+ P+
Sbjct: 88 RAGDLAAARDLL------GRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPT 141
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
+ SVLSAC ++AL G+ HG ++ L+ + + L+ MY KCG + A R FD
Sbjct: 142 NFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFD 201
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA--- 264
P++ +F AM+ G + G + A+ +F M + ++ + + +VL AC A
Sbjct: 202 GMP-SPNEVSF-TAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAG 259
Query: 265 -GHVDKALQIFT-----MMDDDFGLKPKQEHFG-CMVDLLGRSGRLDEARELIRELPEPT 317
+V +A+Q+ ++ FG +H G +VDL + ++DEA ++ L +
Sbjct: 260 DYNVARAIQLAQSIHALVVRKGFG---SDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVS 316
Query: 318 VSVYHSLL---GACWCHLNSDLGEEMAMKLQEMEPEN---PTPFVILSNIYAGLGRWEDV 371
+ ++ L+ G C+ E AM++ E E+ P V SN+ A + DV
Sbjct: 317 IVSWNILITGYGQLGCY-------ERAMEVLEFMQESGFEPNE-VTYSNMLASCIKARDV 368
Query: 372 GRIRQMIN 379
R M +
Sbjct: 369 PSARAMFD 376
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 206/383 (53%), Gaps = 40/383 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T ++VI + + R +H +K +D ++ TAL +Y + + A +
Sbjct: 310 RPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARS 369
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + EK ME +WN+MISG++Q G
Sbjct: 370 IFDAML---------------------EKTME---------------SWNAMISGYAQNG 393
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ A LF+ MQ + P+ ++S LSACA L AL LGK H + + L + + T
Sbjct: 394 LTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMT 453
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG + AR FD+ + K + WNAMISGYG +G+ A++++ M ++
Sbjct: 454 ALIDMYAKCGSIAEARSIFDRMDNK--NVVSWNAMISGYGLHGQGAEALKLYKDMLDARI 511
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P S++F++V+ AC H G VD+ ++F +M +++ + P EH CMVDLLGR+G+L+EA
Sbjct: 512 LPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEAL 571
Query: 308 ELIRELPEPTV--SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
ELI E P+ + V+ +LLGAC H NSDL + + KL E++ EN +V+LSN+Y
Sbjct: 572 ELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLLSNLYTSK 631
Query: 366 GRWEDVGRIRQMINDRQLTKLPG 388
+ + +RQ R+L K PG
Sbjct: 632 KHYSEAAVVRQEAKTRKLVKTPG 654
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 170/387 (43%), Gaps = 49/387 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T S + A A ++ GR VHG +K + T L+ +Y KCG + A
Sbjct: 209 RPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQF 268
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + PD +N++ISG+S G
Sbjct: 269 LFDRMD------------------------------------NPDLVAYNALISGYSVNG 292
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M + +LF+++ ++G P+ + +V+ + L + H V++A L+ D ++T
Sbjct: 293 MVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVST 352
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL ++Y + AR FD K + WNAMISGY +NG E AV +F LMQ+ V
Sbjct: 353 ALTTLYCRLNDMESARSIFDAMLEKTMES--WNAMISGYAQNGLTEMAVALFQLMQELNV 410
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN + + LSAC H G + + ++ + L+ ++D+ + G + EAR
Sbjct: 411 QPNPITISSTLSACAHLGALSLGKWVHRIISKE-KLELNVYVMTALIDMYAKCGSIAEAR 469
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA-G 364
+ + V +++++ H G E ++M PT LS IYA
Sbjct: 470 SIFDRMDNKNVVSWNAMISGYGLH---GQGAEALKLYKDMLDARILPTSSTFLSVIYACS 526
Query: 365 LGRWEDVGR--IRQMINDRQLTKLPGI 389
G D G+ R M N+ ++T PGI
Sbjct: 527 HGGLVDEGQKVFRVMTNEYRIT--PGI 551
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 158/358 (44%), Gaps = 64/358 (17%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
R +HGL++ +DT + +AL +Y K A VF + IL WNT++AG+
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTIL-WNTLLAGL- 190
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSL 148
P + EA + F +M G V P
Sbjct: 191 -----------------------PGS---------------EALEAFVRMVDAGRVRPDS 212
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ S L A A+ S + +G+ HG+ ++ L + E + T L+S+Y KCG A+ FD+
Sbjct: 213 TTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDR 272
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH-- 266
+ PD A+ NA+ISGY NG ES+VE+F + +PNS++ VAV+ GH
Sbjct: 273 MD-NPDLVAY-NALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHEL 330
Query: 267 VDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
+ + L F + +D D + C R ++ AR + + E T+ +++
Sbjct: 331 LARCLHAFVVKARLDADALVSTALTTLYC------RLNDMESARSIFDAMLEKTMESWNA 384
Query: 324 LLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA-------GLGRWEDVGRI 374
++ + +++ + +QE+ + P P I S + A LG+W V RI
Sbjct: 385 MISGYAQNGLTEMAVALFQLMQELNVQ-PNPITISSTLSACAHLGALSLGKW--VHRI 439
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 81/137 (59%), Gaps = 1/137 (0%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +PN +T S +SACA L L G+ VH + K + + + + TAL+DMY KCG +
Sbjct: 408 LNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAE 467
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A ++F + ++N+++WN MI+G L+G+ +A++L++ + P +T+ S+I S
Sbjct: 468 ARSIFDRMD-NKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACS 526
Query: 125 QLGMRFEAFKLFEKMQS 141
G+ E K+F M +
Sbjct: 527 HGGLVDEGQKVFRVMTN 543
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 219/384 (57%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV+SACA + L G+ +HG+ +K+ + +L++MY K G L A
Sbjct: 218 QPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 277
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ R++++WN+M+ N G+++ G
Sbjct: 278 LFEEMP-VRSLVSWNSMVVIHNHN------------------------------GYAEKG 306
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M LF M+ G+ P + ++L AC D + + H ++ R N D +AT
Sbjct: 307 M-----DLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIAT 361
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y K G+ + + F+ EIK D W AM++GY + A+++FDLM +E V
Sbjct: 362 ALLNLYAKLGRLNASEDIFE--EIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 419
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + +F +LSAC H+G V++ + F +M + + ++P+ +H+ CMVDLLGRSGRL++A
Sbjct: 420 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 479
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ +P EP+ V+ +LLGAC + N +LG+E+A +L ++P + +++LSNIY+ G
Sbjct: 480 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 539
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W D ++R ++ +R+LT+ PG S
Sbjct: 540 LWRDASKVRALMKERRLTRNPGCS 563
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 143/320 (44%), Gaps = 43/320 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ + IS+C S+ Y +H +K SD IG LV MY K G
Sbjct: 124 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLG------------ 168
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
E A LF+ + ++ D +WNS++SG S G
Sbjct: 169 --------------------YDEDAQRLFDEMPNK----DLVSWNSLMSGLSGRGYLGAC 204
Query: 133 FKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
F +M++ +G P+ + SV+SACAD+ AL GK HG V++ ++ + +LI+
Sbjct: 205 LNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 264
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY K G A + F++ ++ WN+M+ + NG E +++F+LM++ + P+
Sbjct: 265 MYGKLGFLDAASQLFEEMPVR--SLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 322
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A+ VA+L AC G +A I + G +++L + GRL+ + ++
Sbjct: 323 ATMVALLRACTDTGLGRQAESIHAYI-HRCGFNADIIIATALLNLYAKLGRLNASEDIFE 381
Query: 312 ELPEPTVSVYHSLLGACWCH 331
E+ + + ++L H
Sbjct: 382 EIKDRDRIAWTAMLAGYAVH 401
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V S++ A + +++ H VI++ D + L+SMY K G A+R FD E
Sbjct: 122 VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFD--E 179
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-PNSASFVAVLSACGHAGHVDK 269
+ D WN+++SG G + + F M+ E + PN + ++V+SAC G +D+
Sbjct: 180 MPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDE 239
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+ ++ G+ K + ++++ G+ G LD A +L E+P ++ ++S++
Sbjct: 240 GKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 298
Query: 330 CHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIY-AGLGR 367
+ ++ G ++ MK + P+ T +L GLGR
Sbjct: 299 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 339
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 211/383 (55%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHNV 68
N +T +SV+ A + ++FGR VHGL L+ + + D IG++LVDMY KC C A V
Sbjct: 203 NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ SRN++TW ++I+G+ Q
Sbjct: 263 FDEMP-SRNVVTWT-----------------------------------ALIAGYVQSRC 286
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +FE+M + + P+ K ++SVLSACA + AL G+ H ++I+ + + + T
Sbjct: 287 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTT 346
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI +Y+KCG A F++ K + W AMI+G+ +G A ++F M V
Sbjct: 347 LIDLYVKCGCLEEAILVFERLHEK--NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+AVLSAC H G V++ ++F M F ++PK +H+ CMVDL GR G L+EA+
Sbjct: 405 PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P EPT V+ +L G+C H + +LG+ A ++ +++P + + +L+N+Y+
Sbjct: 465 LIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQN 524
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W++V R+R+ + D+Q+ K PG S
Sbjct: 525 WDEVARVRKQMKDQQVVKSPGFS 547
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 8/251 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
N++I+G +G + A LF+G + D TW +MI GF + G EA F +M+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDK----DVVTWTAMIDGFVRNGSASEAMVYFVEMKK 197
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMATALISMYMKCGQPS 200
TG+ + V SVL A + ++ G+ HG + K D + ++L+ MY KC
Sbjct: 198 TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYD 257
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A++ FD E+ + W A+I+GY ++ ++ + +F+ M + V PN + +VLSA
Sbjct: 258 DAQKVFD--EMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
C H G + + ++ M + ++ ++DL + G L+EA + L E V
Sbjct: 316 CAHVGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYT 374
Query: 321 YHSLLGACWCH 331
+ +++ H
Sbjct: 375 WTAMINGFAAH 385
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T SV+SACA + L GR+VH +K + +T GT L+D+Y+KCGCL A V
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ L +N+ TW MI G +G + A +LF + P+ T+ +++S + G+
Sbjct: 364 FERLH-EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGL 422
Query: 129 RFEAFKLFEKMQ 140
E +LF M+
Sbjct: 423 VEEGRRLFLSMK 434
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 108/242 (44%), Gaps = 10/242 (4%)
Query: 116 WNSMISGFS---QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
W+S+I FS L R +F + M+ G++PS +L A L + H
Sbjct: 70 WDSLIGHFSGGITLNRRL-SFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
H+++ L+ D + +LIS Y G +A R FD E K D W AMI G+ RNG
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDK--DVVTWTAMIDGFVRNGSA 185
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
A+ F M++ V N + V+VL A G V + + + +K
Sbjct: 186 SEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSS 245
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
+VD+ G+ D+A+++ E+P V + +L+ ++ S ++ + +EM +
Sbjct: 246 LVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAG---YVQSRCFDKGMLVFEEMLKSDV 302
Query: 353 TP 354
P
Sbjct: 303 AP 304
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 208/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT+ S+++AC+S L +GR++H ++ +D + LV+MY CG + A
Sbjct: 544 KPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQ 603
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D +N+MI G++
Sbjct: 604 VFDRMT------------------------------------QRDIVAYNAMIGGYAAHN 627
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF+++Q G+ P ++L+ACA+ +L+ KE H V++ D S+
Sbjct: 628 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S Y KCG S A FD+ + + WNA+I G ++G + +++F+ M+ E +
Sbjct: 688 ALVSTYAKCGSFSDALLVFDK--MMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGI 745
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +FV++LSAC HAG +++ + F M DFG+ P EH+GCMVDLLGR+G+LDE
Sbjct: 746 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVE 805
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P + ++ +LLGAC H N + E A +++P+N +V LS++YA G
Sbjct: 806 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAG 865
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ ++R+++ R +TK PG S
Sbjct: 866 MWDSAAKLRKLMEQRGVTKEPGRS 889
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 195/415 (46%), Gaps = 73/415 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T+I+V++A + L++G+ VH L +SD +GTALV MY KCG V
Sbjct: 343 PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW------------ 116
F++L +R+++ WNTMI G+ G E+A E++ + EG P+ T+
Sbjct: 403 FEKLV-NRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTA 461
Query: 117 -----------------------NSMISGFSQLGMRFEAFKLFEK--------------- 138
N++IS +++ G +A LF K
Sbjct: 462 LHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGG 521
Query: 139 ----------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
MQ G+ P+ TS+L+AC+ +AL G+ H VI A L D
Sbjct: 522 LAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATD 581
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+A L++MY CG AR+ FD+ + D +NAMI GY + + A+++FD +
Sbjct: 582 AHVANTLVNMYSMCGSVKDARQVFDRMTQR--DIVAYNAMIGGYAAHNLGKEALKLFDRL 639
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
Q+E +KP+ +++ +L+AC ++G ++ A +I +++ D G +V + G
Sbjct: 640 QEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKD-GYLSDTSLGNALVSTYAKCGS 698
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
+A + ++ + V +++++G C H G+++ + M+ E P ++
Sbjct: 699 FSDALLVFDKMMKRNVISWNAIIGGCAQH---GRGQDVLQLFERMKMEGIKPDIV 750
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 162/343 (47%), Gaps = 44/343 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + ++S+C S L+ GR++H +K D + +++MY KCG + A VF ++
Sbjct: 246 TTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKM 305
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ ++++++W +I G++ G A
Sbjct: 306 E-TKSVVSWTIIIG-----------------------------------GYADCGHSEIA 329
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
F++F+KMQ G+VP+ +VL+A + +ALK GK H H++ A D ++ TAL+ M
Sbjct: 330 FEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKM 389
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG R+ F++ + D WN MI G G +E A EI+ MQ+E + PN
Sbjct: 390 YAKCGSYKDCRQVFEKLVNR--DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKI 447
Query: 253 SFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
++V +L+AC + + +I + ++ D F ++ ++ + R G + +AR L
Sbjct: 448 TYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQN--ALISMYARCGSIKDARLLFN 505
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
++ + + +++G S LG E Q+M+ P
Sbjct: 506 KMVRKDIISWTAMIGGL---AKSGLGAEALAVFQDMQQAGLKP 545
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 40/353 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS ++ ++ C + L GR+VH ++ D AL++MY++CG + A V
Sbjct: 140 NSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQV- 198
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
WN + +E+ + +WN+M+ G+ Q G
Sbjct: 199 -----------WNKL-------NHTERTVH---------------SWNAMVVGYVQYGYI 225
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KL +MQ G+ +LS+C SAL+ G+E H ++A L D ++A +
Sbjct: 226 EEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCI 285
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG AR FD+ E K W +I GY G E A EIF MQQE V P
Sbjct: 286 LNMYAKCGSIHEAREVFDKMETKS--VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVP 343
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +++ VL+A + + + + + G + +V + + G + R++
Sbjct: 344 NRITYINVLNAFSGPAALKWGKTVHSHI-LNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSN 360
+L + +++++G N + E+ ++Q M P N +VIL N
Sbjct: 403 FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMP-NKITYVILLN 454
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 158/357 (44%), Gaps = 50/357 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT+I++++ACA+ L++ +++H L LK SDT +G ALV Y KCG A
Sbjct: 645 KPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALL 704
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ RN+++WN +I G +GR + ++LFE + EG KPD T+ S++S S G
Sbjct: 705 VFDKMM-KRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAG 763
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + F M + G+ P+++ C+ +L L E + +
Sbjct: 764 LLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLD------EVEALIKTMPFQANT 817
Query: 184 SMATALISMYMKCGQ-PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL+ G P R ++ PD+ A + A+ Y G ++SA ++ LM
Sbjct: 818 RIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLM 877
Query: 243 QQEKV------------------------KPNSASFVAVLSACGHA----GHVDKALQIF 274
+Q V P S A L HA G+V +
Sbjct: 878 EQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSV- 936
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
M D D G ++E+ C S RL A LI LP + ++ +L CH
Sbjct: 937 -MHDVDEG---EKENAVCH-----HSERLAIAYGLISTLPGTPIRIFKNLRVCPDCH 984
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 18/243 (7%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A + + +Q G + +L C ++ L G+E H H+I+ D+ ALI
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY++CG AR+ +++ WNAM+ GY + G E A+++ MQQ +
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 251 SASFVAVLSA--------CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
A+ + +LS+ CG HV+ A++ + D + C++++ + G
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVE-AMKARLLFDVNVA--------NCILNMYAKCGS 294
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNI 361
+ EARE+ ++ +V + ++G +S++ E+ K+ QE N ++ + N
Sbjct: 295 IHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Query: 362 YAG 364
++G
Sbjct: 355 FSG 357
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 211/385 (54%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAH 66
E + VT +SV+ A A L + FGR VHG ++ + D +G+ALVDMY KCG A
Sbjct: 201 EVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +RN+++W ++I+G+ Q
Sbjct: 261 KVFNEMP-TRNLVSWG-----------------------------------ALIAGYVQC 284
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA K+F++M G+ P+ VTS L+ACA L +L G+ H +V R+ L + +
Sbjct: 285 NRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG 344
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ MY KCG A F++ K P W AMI+G G+ S++ +F M + +
Sbjct: 345 TALVDMYSKCGCVDEALLVFEKLPAKDVYP--WTAMINGLAMRGDALSSLNLFSQMIRSR 402
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +F+ VLSAC H G VD+ L++F +M D+ L+P +H+GCMVDLLGR+GRL+EA
Sbjct: 403 VQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEA 462
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I +P EPT V+ +L C H +LGE + L +++P + +++L+N+Y+
Sbjct: 463 IKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRC 522
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+WE +R+++ + + K PG S
Sbjct: 523 QKWEAAANVRRLMKGKGVDKSPGCS 547
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 143/306 (46%), Gaps = 12/306 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
N++++ G + + LF E K D +W ++I+G + G EA + F +M+S
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFI----ETAKKDVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPS 200
+G+ + SVL A A L + G+ HG +V + D + +AL+ MY KCG
Sbjct: 198 SGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCD 257
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A + F+ E+ + W A+I+GY + Y+ A+++F M E ++PN ++ + L+A
Sbjct: 258 DAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
Query: 261 CGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G +D+ + +D GL K +VD+ + G +DEA + +LP V
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPAKDVY 373
Query: 320 VYHSLLGACWCHLN--SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQM 377
+ +++ + S L M ++P T +LS G E + R M
Sbjct: 374 PWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM 433
Query: 378 INDRQL 383
I D +L
Sbjct: 434 ICDYRL 439
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 112/266 (42%), Gaps = 32/266 (12%)
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
LF+ LA P WN++I GFS + ++++ G++P +L A +
Sbjct: 60 LFDRLA----TPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFS 115
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
L + + + H+++ L+ D + +L+S + CG +RR F E D W
Sbjct: 116 KLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF--IETAKKDVVSW 172
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG-----------HAGHVD 268
A+I+G RNG A+E F M+ V+ + + V+VL A H +V+
Sbjct: 173 TALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVE 232
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
I+ + +VD+ + G D+A ++ E+P + + +L+
Sbjct: 233 SGRVIWDVYVGS-----------ALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAG- 280
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTP 354
++ + +E QEM E P
Sbjct: 281 --YVQCNRYKEALKVFQEMIIEGIEP 304
>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
Length = 668
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/414 (33%), Positives = 216/414 (52%), Gaps = 35/414 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V+S C + G QVHG +K+ + D I L+ Y +CG + H V
Sbjct: 129 PNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKV 188
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-------------------------EG 103
F+ + RN+++W ++I G R ++A+ LF +
Sbjct: 189 FEGMS-ERNVVSWTSLICGYARGDRPKEAVSLFFEMLNKVMVNALVDMYMKCGAIDAAKR 247
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L E + +N+++S +++ G+ EA + ++M G P + S +SA A L
Sbjct: 248 LFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVD 307
Query: 164 LKLGKETHGHVIRADLNK-----DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
L GK HG+ + + K D + TAL+ M+ +CG P A + F++ + D +
Sbjct: 308 LFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER--DVSA 365
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
W A I G E A +F+ M + VKP+ FV VL+AC H G V++ L IF++M+
Sbjct: 366 WTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLME 425
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
D G+ P+ EH+GCMVDLLGR+G L EA +LI+ +P EP V+ SLL AC H N ++
Sbjct: 426 DH-GISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMA 484
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A ++ E+ P+ V+LSNIYA G+W DV R+R + ++ + K+PG S+
Sbjct: 485 TYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSS 538
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 111/274 (40%), Gaps = 55/274 (20%)
Query: 94 SEKAMELFEGLAHEGFKPDPATW--NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
+ KA ELF+ E + D A + NS+I G+S G+ EA L+ +M G+ P+
Sbjct: 79 ARKAFELFK----EDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTF 134
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
VLS C ++A G + HG V++ L +D + LI Y +CG + F+
Sbjct: 135 PFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE 194
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ + W ++I GY R + AV +F
Sbjct: 195 R--NVVSWTSLICGYARGDRPKEAVSLF-------------------------------- 220
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
F M++ + +VD+ + G +D A+ L E + + +Y+++L +
Sbjct: 221 --FEMLN--------KVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSN---Y 267
Query: 332 LNSDLGEEMAMKLQEMEPENPTP--FVILSNIYA 363
L E L EM + P P +LS I A
Sbjct: 268 ARQGLAREALAILDEMLQQGPRPDRVTMLSAISA 301
>gi|223946989|gb|ACN27578.1| unknown [Zea mays]
gi|414586292|tpg|DAA36863.1| TPA: hypothetical protein ZEAMMB73_743648 [Zea mays]
Length = 545
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 209/382 (54%), Gaps = 13/382 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ ++ AC +L + GRQVH + +S ++ +L++MY +CG L A F +
Sbjct: 118 TYPFLLKACGALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGM 177
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRF 130
+ +++++WNT+I+ G+ +A ELF + PD +W +++SG++ +G
Sbjct: 178 R-EKDVVSWNTLISAHARMGQMRRARELFYSM------PDKTVVSWTALVSGYTAVGDFT 230
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A ++F MQ G P + +VL ACA L AL+LG+ + + + + + AL+
Sbjct: 231 GAVEVFRLMQMEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALM 290
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKP 249
MY KCG A + F K D W+ I G +G AV +F++M +E +V P
Sbjct: 291 EMYAKCGCIEEALQLFHGMSEK--DVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMP 348
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV +LSAC HAG VD+ L+ M +D+G++P EH+GC+VDLLGRSGR+ A +
Sbjct: 349 NGITFVGLLSACSHAGLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLLGRSGRIQRALDT 408
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
IR +P P ++ SLL AC H + + A +L E+EP + V+L+N+Y GRW
Sbjct: 409 IRGMPVPPDGKIWGSLLSACRSHGDVETAVVAAERLVELEPGDVGNLVMLANVYGAAGRW 468
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+V R+ I R K PG S
Sbjct: 469 GEVASTRKEIRSRSTRKTPGCS 490
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 85/153 (55%), Gaps = 6/153 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V+ ++V+ ACA L L+ GR ++ K I AL++MY KCGC+ A
Sbjct: 245 EPDDVSIVAVLPACAQLGALELGRWIYAYCSKHGMLGKVYICNALMEMYAKCGCIEEALQ 304
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
+F + +++++W+T I G+ +GR+ +A+ LFE + EG P+ T+ ++S S
Sbjct: 305 LFHGMS-EKDVISWSTAIGGLAAHGRAREAVRLFEVMDREGRVMPNGITFVGLLSACSHA 363
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLK---CVTSVL 155
G+ E + ++M + G+ P ++ CV +L
Sbjct: 364 GLVDEGLRYLDQMKEDYGVEPGVEHYGCVVDLL 396
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 105/263 (39%), Gaps = 51/263 (19%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+ + L CA L HG +R L++ +AT ++ + G+ + A R F Q
Sbjct: 13 IIARLRTCATFRDLL---RAHGLAVRLCLSQSSYVATQIVHICNAHGRAAHAARVFAQ-- 67
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA--------VLSACG 262
I + NAMI Y +N + AVE++ M + P++A F +L ACG
Sbjct: 68 IPAPNLHLHNAMIKAYAQNHLHRDAVEVYVRMLRCLPHPSTAGFSVGDRFTYPFLLKACG 127
Query: 263 ----------------------HAGHVDKALQIFTMMDD------DF-GLKPKQ-EHFGC 292
HA + ++++T D F G++ K +
Sbjct: 128 ALAASRLGRQVHAHVARSGCESHAVVQNSLIEMYTRCGDLSTARKAFDGMREKDVVSWNT 187
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
++ R G++ AREL +P+ TV + +L+ + + G +L +ME P
Sbjct: 188 LISAHARMGQMRRARELFYSMPDKTVVSWTALVSG-YTAVGDFTGAVEVFRLMQMEGFEP 246
Query: 353 TPFVILSNIYA-------GLGRW 368
I++ + A LGRW
Sbjct: 247 DDVSIVAVLPACAQLGALELGRW 269
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P T +++ ACA L L+ G+++H +K DT +G +L+ MY KCG + A
Sbjct: 309 NPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNA-- 366
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
G E D +++++ISG Q G
Sbjct: 367 ----------------------------------VGFLDEMIAKDTVSYSAIISGCVQNG 392
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +F +MQS+G+ P L+ + ++L AC+ L+AL+ G HG+ + D S+
Sbjct: 393 YAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICN 452
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I MY KCG+ + +R FD+ + + D WN MI GYG +G A+ +F +Q +
Sbjct: 453 AIIDMYSKCGKITISREIFDRMQNR--DIISWNTMIIGYGIHGLCVEALSLFQELQALGL 510
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ + +AVLSAC H+G V + F+ M +F +KP+ H+ CMVDLL R+G LDEA
Sbjct: 511 KPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAY 570
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I+ +P P V ++ +LL AC H N ++GE+++ K+Q + PE FV++SNIY+ +G
Sbjct: 571 TFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVG 630
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+D IR + K PG S
Sbjct: 631 RWDDAAYIRSIQRHHGYKKSPGCS 654
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 160/358 (44%), Gaps = 50/358 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T +S++ L G+ +H ++ + ++ TAL+DMY KC L A +
Sbjct: 208 PNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKI 267
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +N + W+ MI G +L H+ A ++ M+ +
Sbjct: 268 FNTV-NKKNDVCWSAMIGGYVL---------------HDSISDALALYDDMLCIY----- 306
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
G+ P+ + ++L ACA L+ LK GK+ H H+I++ ++ D ++ +
Sbjct: 307 --------------GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY KCG A F D E+ D ++A+ISG +NG E A+ IF MQ +
Sbjct: 353 LISMYAKCGIMDNAVGFLD--EMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIA 410
Query: 249 PNSASFVAVLSACGHAGHVDKAL--QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P + +A+L AC H + +T++ G ++D+ + G++ +
Sbjct: 411 PYLETMIALLPACSHLAALQHGTCCHGYTVVR---GFTNDTSICNAIIDMYSKCGKITIS 467
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PENPTPFVILS 359
RE+ + + +++++ H L E QE++ P++ T +LS
Sbjct: 468 REIFDRMQNRDIISWNTMIIGYGIH---GLCVEALSLFQELQALGLKPDDVTLIAVLS 522
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 144/354 (40%), Gaps = 43/354 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P + TF ++ AC+SL LQ GR +H + D + TAL+ MY KCG L
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 65 AHNVFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F + R+I+ WN MIA F
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIA-----------------------------------AF 185
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
S + + +MQ G+ P+ + S+L +AL GK H + IR +
Sbjct: 186 SFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNV 245
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLM 242
+ TAL+ MY KC +AR+ F+ K D W+AMI GY + A+ ++ D++
Sbjct: 246 VLQTALLDMYAKCHLLFYARKIFNTVNKKND--VCWSAMIGGYVLHDSISDALALYDDML 303
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ P A+ +L AC + + ++ M G+ ++ + + G
Sbjct: 304 CIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS-GMDLDTTVGNSLISMYAKCGI 362
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
+D A + E+ Y +++ C + + E+ + ++M+ P++
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGC---VQNGYAEKALLIFRQMQSSGIAPYL 413
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 10/272 (3%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP WN MI ++ G ++ L+ M G+ P+ +L AC+ L AL+LG+
Sbjct: 69 KPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRL 128
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H H L+ D ++TAL+ MY KCG A+ F+ + D WNAMI+ + +
Sbjct: 129 IHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFH 188
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQ 287
+ + MQQ V PNS++ V++L G A H KA+ + + + F Q
Sbjct: 189 ALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQ 248
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM--KLQ 345
++D+ + L AR++ + + + +++G H + + +A+ +
Sbjct: 249 T---ALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLH--DSISDALALYDDML 303
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQM 377
+ NPTP L+ + + D+ R +++
Sbjct: 304 CIYGLNPTP-ATLATMLRACAQLTDLKRGKKL 334
>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 203/384 (52%), Gaps = 43/384 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ SV+ AC LL L RQ+HG LK+ +SD + +AL+D Y K G A N
Sbjct: 114 RPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALN 170
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E MI G D WNS+I GF+Q
Sbjct: 171 VFNE------------MITG------------------------DLVVWNSIIGGFAQNS 194
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E L+++M+ V +TSVL AC L+ L+LG++ H HV++ D +D +
Sbjct: 195 DGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--QDLILNN 252
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A F + + D W+ MI+G +NG A+++F+ M+ +
Sbjct: 253 ALLDMYCKCGSLEDANLLFTRM-MTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGP 311
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN + + VL AC HAG V+ F M + FG+ P +EH+GC++DLLGR+G+LDEA
Sbjct: 312 KPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAGKLDEAV 371
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI E+ EP + LLGAC H N DL A ++ +++P + +++LSNIYA
Sbjct: 372 KLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSNIYANSQ 431
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WEDV +R+ + R + K PG S
Sbjct: 432 KWEDVAEVRRKMRTRGVKKDPGCS 455
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 143/327 (43%), Gaps = 53/327 (16%)
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
S + +T++ +I ++ G ++A + E + G++P N++I+ + + G+ EA
Sbjct: 13 SADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARN 72
Query: 135 LFEKMQSTGMV-------------------------------PSLKCVTSVLSACADLSA 163
LF++M +V P++ +SVL AC L
Sbjct: 73 LFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLN 132
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L ++ HG +++ L D + +ALI Y K G+ A F+ E+ D WN++I
Sbjct: 133 L---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFN--EMITGDLVVWNSII 187
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM---DDD 280
G+ +N + + + ++ M++ + ++ +VL AC ++ Q+ + D D
Sbjct: 188 GGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYDQD 247
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELI-RELPEPTVSVYHSLLGACWCHLNSDLGEE 339
L ++D+ + G L++A L R + E V + +++ L +
Sbjct: 248 LILN------NALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAG----LAQNGFSA 297
Query: 340 MAMKLQE-MEPENPTP--FVILSNIYA 363
A+KL E M+ + P P IL ++A
Sbjct: 298 DALKLFEAMKSKGPKPNYITILGVLFA 324
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 12/197 (6%)
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
K E M + + ++ C A++ + H HV + LI+MY
Sbjct: 2 KAMEAMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMY 61
Query: 194 MKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
+K G AR FD+ PD + W MIS Y + A++ LM +E V+PN
Sbjct: 62 VKFGLLDEARNLFDEM---PDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELI 310
++ +VL AC D L + + + + + F ++D + G +A +
Sbjct: 119 TYSSVLRAC------DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVF 172
Query: 311 RELPEPTVSVYHSLLGA 327
E+ + V++S++G
Sbjct: 173 NEMITGDLVVWNSIIGG 189
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 224/415 (53%), Gaps = 43/415 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E NS+++ +VI+ + L RQ+ L + TA++ Y++ + A
Sbjct: 292 EKNSISWTTVINGYVRMGKLDEARQL----LNQMPYRNVAAQTAMISGYVQNKRMDDARQ 347
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ R+++ WNTMIAG GR ++A+ LF+ + K D +WN+M++ ++Q+G
Sbjct: 348 IFNQI-SIRDVVCWNTMIAGYSQCGRMDEALHLFKQMV----KKDIVSWNTMVASYAQVG 402
Query: 128 MRFEAFKLFEKMQSTGMV-------------------------------PSLKCVTSVLS 156
A K+FE+M+ +V P LS
Sbjct: 403 QMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLS 462
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
+CA L+AL++GK+ H V+++ D ++ ALI+MY KCG S A F +I D
Sbjct: 463 SCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFK--DIDHFDV 520
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
WN++I+ Y NG A+++F M+ E V P+ +FV +LSAC H G +D+ L++F
Sbjct: 521 VSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKC 580
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSD 335
M + ++P EH+ CMVDLLGR+GRL+EA +L+R + ++ +LLGAC H N +
Sbjct: 581 MVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLE 640
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L + A KL E EP + +V+LSN+ A GRW++V R+R+++ ++ K PG S
Sbjct: 641 LAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEKGAEKQPGWS 695
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 149/339 (43%), Gaps = 33/339 (9%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
K G + A VFQ + +N +T N+MI+ NGR A +LF+G+ +WN
Sbjct: 27 KSGQIDEAIKVFQHMT-HKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI----VSWN 81
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
SMI+ + EA +LF+KM + + +T C + +++
Sbjct: 82 SMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMIT-----CYTRNGELAKARNLFNLLPY 136
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
N A+++ Y K Q ARR FD K D WN+M++GY RNGE ++
Sbjct: 137 KWNP--VCCNAMVAGYAKNRQFDEARRLFDAMPAK--DLVSWNSMLTGYTRNGEMRLGLQ 192
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F+ M + V S+ ++ G ++ + + F + + P + M+
Sbjct: 193 FFEEMAERDV----VSWNLMVDGFVEVGDLNSSWEFFEKIPN-----PNTVSWVTMLCGF 243
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACW--CHLNSDLGEEMAMKLQEMEPENPTPF 355
R G++ EAR L ++P V +++++ A CH++ + M EM +N +
Sbjct: 244 ARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFM-----EMPEKNSISW 298
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
+ N Y +G+ ++ RQ++N + +A I+
Sbjct: 299 TTVINGYVRMGKLDEA---RQLLNQMPYRNVAAQTAMIS 334
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 122/258 (47%), Gaps = 34/258 (13%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + +++ Y + G + F+E+ R++++WN M+ G + G + E FE +
Sbjct: 170 DLVSWNSMLTGYTRNGEMRLGLQFFEEM-AERDVVSWNLMVDGFVEVGDLNSSWEFFEKI 228
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ P+ +W +M+ GF++ G EA +LF++M +V + + + C A+
Sbjct: 229 PN----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAI 284
Query: 165 KLGKE------------THGHVIRADLN-----------KDESMATALISMYMKCGQPSW 201
L E +G+V L+ ++ + TA+IS Y++ +
Sbjct: 285 SLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDD 344
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
AR+ F+Q I+ D WN MI+GY + G + A+ +F M VK + S+ ++++
Sbjct: 345 ARQIFNQISIR--DVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWNTMVASY 398
Query: 262 GHAGHVDKALQIFTMMDD 279
G +D A++IF M +
Sbjct: 399 AQVGQMDAAIKIFEEMKE 416
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
++ G +G +D+A+++F M K H M+ ++GR+ +AR+L +P+
Sbjct: 22 ITQLGKSGQIDEAIKVFQHMTH----KNTVTH-NSMISAFAKNGRISDARQLFDGMPQRN 76
Query: 318 VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQM 377
+ ++S++ A +L++D EE +M + + ++ Y G ++ + R +
Sbjct: 77 IVSWNSMIAA---YLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNG---ELAKARNL 130
Query: 378 IN 379
N
Sbjct: 131 FN 132
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 211/369 (57%), Gaps = 31/369 (8%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE------- 102
TA+VD Y K G + A +F + +N+++W MI+G + NG+ ++A LFE
Sbjct: 175 TAMVDGYAKIGEIEQARALFNCM-PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Query: 103 --------GLAHEGFKP------------DPATWNSMISGFSQLGMRFEAFKLFEKMQST 142
G EG D A+WN+MI+G++Q G EA KL +M
Sbjct: 234 VAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKM 293
Query: 143 GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
GM P + SVL+AC+ L++L+ G++TH V+++ S+ ALI+MY KCG +
Sbjct: 294 GMQPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDS 353
Query: 203 RRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
F Q I D WNAMI+ + R+G Y+ A+ F M+ +V+P+ +F+++LSACG
Sbjct: 354 ELAFRQ--IDHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACG 411
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVY 321
HAG V ++L F M + + + EHF C+VD+L R G++++A ++I+E+P E ++
Sbjct: 412 HAGKVHESLNWFNSMIXSYKIVXRPEHFACLVDILSRGGQVEKAYKIIQEMPFEADCGIW 471
Query: 322 HSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDR 381
+LL AC HLN LGE A K+ E+EP+N +V+LSNIYA G W +V R+R ++ ++
Sbjct: 472 GALLAACHVHLNVKLGELAAKKIVELEPQNSGAYVVLSNIYAAAGMWGEVTRVRGLMREQ 531
Query: 382 QLTKLPGIS 390
+ K P S
Sbjct: 532 GVKKQPAYS 540
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 161/340 (47%), Gaps = 33/340 (9%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT+ +++ Y K GC + +F L ++N+++WN+MIAG + + R ++A + F+ +
Sbjct: 77 DTVSWNSIITGYWKNGCFDESKRLFG-LMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAM 135
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM------QSTGMVPSLKCVTSVLSAC 158
+ A+WN+MISG + EA +LFE+M T MV + + A
Sbjct: 136 PQR----NTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAKIGEIEQAR 191
Query: 159 ADLSALKLGKET------HGHVIRADLNKDESM-----------ATALISMYMKCGQPSW 201
A + + G+V ++ E++ TA+I+ Y K G+
Sbjct: 192 ALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDK 251
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A+ FDQ + D A WNAMI+GY +NG E A+++ M + ++P+ ++ ++VL+AC
Sbjct: 252 AKILFDQIPCR--DLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTAC 309
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
+ + + ++ G + + ++ + + G + ++ R++ P V +
Sbjct: 310 SSLASLQEGRKTHVLVLKS-GYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSW 368
Query: 322 HSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFVILS 359
++++ A H + L M+ +EP+ T +LS
Sbjct: 369 NAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLS 408
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T ISV++AC+SL LQ GR+ H L LK +S I AL+ MY KCG + +
Sbjct: 296 QPDHSTLISVLTACSSLASLQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSEL 355
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+++ ++++WN MIA +G ++A+ F + +PD T+ S++S G
Sbjct: 356 AFRQIDHP-DVVSWNAMIAAFARHGFYDRALASFGEMRSNRVEPDGITFLSLLSACGHAG 414
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCV 151
E+ F M+ S K V
Sbjct: 415 KVHESLNWF-----NSMIXSYKIV 433
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 95/202 (47%), Gaps = 22/202 (10%)
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+ G AR+ FD E+ D WN++I+GY +NG ++ + +F LM + N S+
Sbjct: 59 RAGNIGAARQVFD--EMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTK----NVVSW 112
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRE 312
++++ C +D+A Q F M P++ + M+ L R R++EA L E
Sbjct: 113 NSMIAGCIEDERIDEAWQYFQAM-------PQRNTASWNAMISGLVRYDRVEEASRLFEE 165
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGE-EMAMKLQEMEPE-NPTPFVILSNIYAGLGRWED 370
+P V Y +++ + +GE E A L P+ N + ++ + Y G++++
Sbjct: 166 MPRRNVISYTAMVDGY-----AKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDE 220
Query: 371 VGRIRQMINDRQLTKLPGISAG 392
+ + + D+ + + + G
Sbjct: 221 AENLFEQMPDKNIVAMTAMITG 242
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 221/387 (57%), Gaps = 12/387 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +F+ AC + + ++ G QV +K+ + + AL+ M+ K G + A NV
Sbjct: 276 PNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNV 335
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F R+ +WNTMI + +G A ELF+ + HE D +W+++I+G+ Q+G
Sbjct: 336 FDS-AVDRDFYSWNTMIGAYVGSGNMVLAKELFDEM-HE---RDVVSWSTIIAGYVQVGC 390
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F KM + + P+ + S L+AC++L AL GK H ++ R ++ ++ + +
Sbjct: 391 FMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLAS 450
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ A F + ++K WNAMI G+ +G+ E A+ +F+ M+ EKV
Sbjct: 451 LIDMYAKCGEIDSASSVFHEHKVKRKVWP-WNAMIGGFAMHGKPEEAINVFEKMKVEKVS 509
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+A+L+AC H V + F +M D+G+ P+ EH+GCMVDLL RSG L ++ E
Sbjct: 510 PNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEE 569
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P V+++ +LL AC + + + G + ++E++P + V+L NIY+ GR
Sbjct: 570 MILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGR 629
Query: 368 WEDVGRIR---QMINDRQLTKLPGISA 391
W + +R ++ +DR+ K+PG S+
Sbjct: 630 WNEARMVREKNEINSDRK--KIPGFSS 654
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 85/158 (53%), Gaps = 4/158 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T +S ++AC++L+ L G+ +H + + + + +L+DMY KCG + A +
Sbjct: 407 KPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASS 466
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E K R + WN MI G ++G+ E+A+ +FE + E P+ T+ ++++ S
Sbjct: 467 VFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGY 526
Query: 128 MRFEAFKLFEKMQS-TGMVPSLK---CVTSVLSACADL 161
M E FE M S G+ P ++ C+ +LS L
Sbjct: 527 MVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHL 564
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 125/294 (42%), Gaps = 40/294 (13%)
Query: 105 AHEGF----KPDPATWNSMISGFSQLGMRF-EAFKLFEKM-QSTGMVPSLKCVTSVLSAC 158
AH+ F +PD +N+MI S + ++ +F + + +G P+ AC
Sbjct: 229 AHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGAC 288
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF--------- 209
+ ++ G++ H ++ L+ + + ALI M+ K G+ AR FD
Sbjct: 289 GNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWN 348
Query: 210 --------------------EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
E+ D W+ +I+GY + G + A++ F M Q +VKP
Sbjct: 349 TMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKP 408
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V+ L+AC + +D+ I + D +K ++D+ + G +D A +
Sbjct: 409 NEYTMVSALAACSNLVALDQGKWIHVYIRRD-NIKMNDRLLASLIDMYAKCGEIDSASSV 467
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSN 360
E + V +++++G H + + MK++++ P N F+ L N
Sbjct: 468 FHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSP-NKVTFIALLN 520
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/415 (34%), Positives = 218/415 (52%), Gaps = 40/415 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S TF S+I AC + L+F VHG + S + T+LVD Y G + + V
Sbjct: 78 PTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRV 137
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-- 126
F E+ R++ W TM++G++ G A LF+ + ATWN++I G+++L
Sbjct: 138 FDEMP-ERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNL----ATWNTLIDGYARLRE 192
Query: 127 ----------------------------GMRF-EAFKLFEKMQSTGMVPSLKCVTSVLSA 157
RF EA +F +M G+ P + +V+SA
Sbjct: 193 VDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISA 252
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA L AL LGKE H ++++ N D + +ALI MY KCG S R F+++ +
Sbjct: 253 CAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCG--SLDRSLLMFFKLREKNLF 310
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN++I G +G E A+ +FD M++EK+KPN +FV+VLSAC HAG +++ + F M
Sbjct: 311 CWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASM 370
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDL 336
D + P EH+GCMVDLL ++G L+EA +LIR + EP ++ +LL C H N ++
Sbjct: 371 TRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEI 430
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK-LPGIS 390
+ A KL +EP N + +L N+ A + RW + +IR + ++ + K PG S
Sbjct: 431 AQVAANKLMVLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSS 485
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 71/344 (20%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ +N+MI GF Q +A +L+ +M + P+ S++ AC +S L+ +
Sbjct: 43 PNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAV 102
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ---------------------- 208
HGHV R + + T+L+ Y G+ + R FD+
Sbjct: 103 HGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDM 162
Query: 209 ------FEIKPD-DPAFWNAMISGYGR-------------------------------NG 230
F++ PD + A WN +I GY R N
Sbjct: 163 SSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNK 222
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEH 289
+ A+ +F+ M + + P+ + V+SAC H G +D +I + +M F L +
Sbjct: 223 RFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNL---DVY 279
Query: 290 FG-CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQE 346
G ++D+ + G LD + + +L E + ++S++ H ++ M M+ ++
Sbjct: 280 IGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREK 339
Query: 347 MEPENPTPFVILSNI-YAGLGRWEDVGRIRQMINDRQLTKLPGI 389
++P T +LS +AGL E R M D + PG+
Sbjct: 340 IKPNGVTFVSVLSACNHAGLIE-EGRKRFASMTRDHSIP--PGV 380
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 206/383 (53%), Gaps = 41/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVT + +I AC S + L+ G +H TLK SD + + MY+KCG + A +F
Sbjct: 151 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 210
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ + G++ +WN+M+SG++Q G+
Sbjct: 211 DEMP-----------VKGLI-------------------------SWNAMVSGYAQNGLA 234
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+L+ M G+ P + VLS+CA+L A +G E + + + + AL
Sbjct: 235 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNAL 294
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I+MY +CG + A+ FD P+ W A+I GYG +G E AV++F M + ++
Sbjct: 295 INMYARCGNLTKAQAVFDGM---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIE 351
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC HAG D+ L+ F MM ++ L+P EH+ CMVDLLGR+GRL EA+
Sbjct: 352 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 411
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P +P +V+ +LLGAC H N +L E ++ E+EPEN +V+LSNIY+
Sbjct: 412 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 471
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ V RIR M+ +++L K PG S
Sbjct: 472 SKGVLRIRIMMKEKKLKKDPGCS 494
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 42/363 (11%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D PN+ TF + +CA+L G Q HG K+ + + T L+ MY K + A
Sbjct: 45 DRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNAR 104
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF+E SR + +N+++SG+
Sbjct: 105 KVFEENFHSRKL----------------------------------TVCYNALVSGYVSN 130
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA LF +M G+ + + ++ AC L+LG H ++ + D S+
Sbjct: 131 SKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 190
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
I+MYMKCG ++A++ FD+ +K WNAM+SGY +NG + +E++ M
Sbjct: 191 NCFITMYMKCGSVNYAQKLFDEMPVK--GLISWNAMVSGYAQNGLATNVLELYRNMDMNG 248
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ + V VLS+C + G ++ F + F P + ++++ R G L +
Sbjct: 249 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNN--ALINMYARCGNLTK 306
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-Y 362
A+ + +PE T+ + +++G H + ++ ++ M +EP+ +LS +
Sbjct: 307 AQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSH 366
Query: 363 AGL 365
AGL
Sbjct: 367 AGL 369
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+ + ++ +A L+ +M G P+ L +CA LS LG + HG +
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + T LISMY K AR+ F++ +NA++SGY N + A
Sbjct: 77 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCM 293
V +F M +E V NS + + ++ AC +++ +L T+ +G C
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL---KYGFDSDVSVVNCF 193
Query: 294 VDLLGRSGRLDEARELIRELP 314
+ + + G ++ A++L E+P
Sbjct: 194 ITMYMKCGSVNYAQKLFDEMP 214
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 18/251 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ---SDTMIGTALVDMYLKCGCLPC 64
P+ VT + V+S+CA+L G H + KI+ S+ + AL++MY +CG L
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVG---HEVEFKIQASGFTSNPFLNNALINMYARCGNLTK 306
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + R +++W +I G ++G E A++LF+ + G +PD + ++S S
Sbjct: 307 AQAVFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365
Query: 125 QLGMRFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ + + F+ M+ + C+ +L L KE + +
Sbjct: 366 HAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRL------KEAQTLIESMPIK 419
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D ++ AL+ A F++ E++P++ ++ + + Y + + I
Sbjct: 420 PDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIR 479
Query: 240 DLMQQEKVKPN 250
+M+++K+K +
Sbjct: 480 IMMKEKKLKKD 490
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 205/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T SV+ ACA+L L+ G+++H LK ++ +G+++ MY K G L A+
Sbjct: 478 PNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQF 537
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + D WN MI FSQ G
Sbjct: 538 FRRMP------------------------------------VKDSVCWNLMIVSFSQNGK 561
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LF +M ++G +++ LSACA+ AL GKE H V+R D +A+
Sbjct: 562 PELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAST 621
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ + AR FD + K + WN++I+ YG +G +++F M + ++
Sbjct: 622 LIDMYSKCGKLALARSVFDMMDWK--NEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQ 679
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ ++SACGHAG VD+ + F M +++G+ + EHF CMVDL GR+GRL EA +
Sbjct: 680 PDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFD 739
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P P + SLLGAC H N +L + + L E++P N +V+LSN++AG G
Sbjct: 740 TIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGE 799
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V ++R ++ ++ + K+PG S
Sbjct: 800 WESVLKVRSLMKEKGVQKIPGYS 822
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 58/367 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S+TF S + + L++ ++VH ++ D + +ALVD+Y K G + A F
Sbjct: 378 DSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTF 437
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q+ NT++ D A +MISG+ G+
Sbjct: 438 QQ----------NTLV--------------------------DVAVCTAMISGYVLNGLN 461
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF + GMVP+ + SVL ACA L++LKLGKE H +++ L + +++
Sbjct: 462 VEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSI 521
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
MY K G+ A +FF + +K D WN MI + +NG+ E A+++F M K
Sbjct: 522 TYMYAKSGRLDLAYQFFRRMPVK--DSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF 579
Query: 250 NSASFVAVLSACGH--AGHVDKALQIF----TMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+S S A LSAC + A + K L F + + D F ++D+ + G+L
Sbjct: 580 DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVAST-------LIDMYSKCGKL 632
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILS 359
AR + + ++S++ A H DL EM ++P++ T VI+S
Sbjct: 633 ALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVE--AGIQPDHVTFLVIMS 690
Query: 360 NI-YAGL 365
+AGL
Sbjct: 691 ACGHAGL 697
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 138/307 (44%), Gaps = 39/307 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNSV+F+ ++S CA+ ++ G Q+HGL ++ +SD + ++ MY KCG L A
Sbjct: 275 KPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARK 334
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D TWN +I+G+ Q G
Sbjct: 335 IFDIMP------------------------------------QTDTVTWNGLIAGYVQNG 358
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF+ M ++G+ S L + +LK KE H +++R + D + +
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y K G A + F Q + D A AMISGY NG A+ +F + QE +
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLV--DVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN + +VL AC + ++ + GL+ + + + +SGRLD A
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKK-GLENVCQVGSSITYMYAKSGRLDLAY 535
Query: 308 ELIRELP 314
+ R +P
Sbjct: 536 QFFRRMP 542
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 40/270 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF VI AC L + + VH L + D IG++L+ +Y G + A +
Sbjct: 175 PDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYL 234
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F EL IL WN M++G+ + G
Sbjct: 235 FDELPVRDCIL------------------------------------WNVMLNGYVKNGD 258
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A F++M+++ + P+ +LS CA ++ G + HG VIR+ D ++A
Sbjct: 259 FNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANT 318
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+I+MY KCG AR+ FD I P D WN +I+GY +NG + AV +F M V
Sbjct: 319 IITMYSKCGNLFDARKIFD---IMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGV 375
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMM 277
K +S +F + L + +G + ++ + +
Sbjct: 376 KLDSITFASFLPSVLKSGSLKYCKEVHSYI 405
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN +I GFS LG A F +M + + P V+ AC L+ + L K H
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D + ++LI +Y G A+ FD+ ++ D WN M++GY +NG++ SA
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVR--DCILWNVMLNGYVKNGDFNSA 262
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+ F M+ VKPNS SFV +LS C G V +Q+ ++ G + ++
Sbjct: 263 LGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFESDPTVANTIIT 321
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ + G L +AR++ +P+ ++ L+
Sbjct: 322 MYSKCGNLFDARKIFDIMPQTDTVTWNGLIAG 353
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 208/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T SV+ + + + G+++HG ++ SD IG++LVDMY K + +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D +WNS+++G+ Q G
Sbjct: 299 VFSRL------------------------------------YCRDGISWNSLVAGYVQNG 322
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF +M + + P +SV+ ACA L+ L LGK+ HG+V+R + +A+
Sbjct: 323 RYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIAS 382
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ FD+ + D W A+I G+ +G AV +F+ M+++ V
Sbjct: 383 ALVDMYSKCGNIKAARKIFDRMNVL--DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGV 440
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +FVAVL+AC H G VD+A F M +GL + EH+ + DLLGR+G+L+EA
Sbjct: 441 KPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAY 500
Query: 308 ELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I ++ EPT SV+ +LL +C H N +L E++A K+ ++ EN +V++ N+YA G
Sbjct: 501 NFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNG 560
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW+++ ++R + + L K P S
Sbjct: 561 RWKEMAKLRLRMRKKGLRKKPACS 584
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 176/360 (48%), Gaps = 26/360 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC---GCLPCA 65
P+ F SV+ +C ++ L+FG VHG +++ D G AL++MY K G
Sbjct: 103 PDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISV 162
Query: 66 HNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
NVF E+ + + N + ++ + +FE + + D ++N++I+G++
Sbjct: 163 GNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMP----RKDVVSYNTIIAGYA 218
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q GM +A ++ +M +T + P ++SVL ++ + GKE HG+VIR ++ D
Sbjct: 219 QSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVY 278
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++L+ MY K + + R F + + D WN++++GY +NG Y A+ +F M
Sbjct: 279 IGSSLVDMYAKSARIEDSERVFSRLYCR--DGISWNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 245 EKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
KVKP + +F +V+ AC H H+ K L + + G +VD+ + G
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRG---GFGSNIFIASALVDMYSKCGN 393
Query: 303 LDEAREL------IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
+ AR++ + E+ + + H+L G H L EE MK Q ++P N FV
Sbjct: 394 IKAARKIFDRMNVLDEVSWTAIIMGHALHGH--GHEAVSLFEE--MKRQGVKP-NQVAFV 448
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 97/237 (40%), Gaps = 35/237 (14%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P W S+I F+ + +A F +M+++G P SVL +C + L+ G+
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 171 HGHVIRADLNKDESMATALISMYMKC---GQPSWARRFFDQ------------------- 208
HG ++R ++ D AL++MY K G FD+
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 209 -----------FEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
FE+ P D +N +I+GY ++G YE A+ + M +KP+S + +
Sbjct: 188 MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
VL V K +I + G+ +VD+ +S R++++ + L
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRK-GIDSDVYIGSSLVDMYAKSARIEDSERVFSRL 303
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 221/408 (54%), Gaps = 37/408 (9%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
SV+ AC LL GRQVHG LK D +G ++V MY+ G + A VF + +
Sbjct: 114 SVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMP-N 172
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEG-----------------------LAHEGFK-- 110
R++++WN+MIAG + G E A ELF+ LA + F+
Sbjct: 173 RDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETM 232
Query: 111 --PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
D TW SMIS + Q +A LF +M S G+ P + SVLSA ADL ++ GK
Sbjct: 233 SDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGK 292
Query: 169 ETHGHVIRADLNKDE----SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
H +V +NK E + +ALI MY KCG A F + + WN+MIS
Sbjct: 293 WLHAYV---SMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSISHR-RNIGDWNSMIS 348
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +G A++IF M++ ++PN +F+ +LS C H G V++ F M + + +
Sbjct: 349 GLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIV 408
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P+ +H+GCM+DL GR+GRL++A +I+ +P E + + ++L A H + ++G+ A++
Sbjct: 409 PRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALR 468
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
E+ P++ + +V+LSNIYA GRW+DV +IR M+ R + K+ G S+
Sbjct: 469 AIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSS 516
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
P+ +SV+SA A L +++ G+ +H +++ + S IG+AL+DMY KCG + A+
Sbjct: 269 RPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAY 328
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+VF+ + RNI WN+MI+G+ ++G + +A+++F + +P+ T+ ++S S
Sbjct: 329 HVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHG 388
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E FE M + +VP ++ C+ + L ++ G + D
Sbjct: 389 GLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRL------EDALGVIQNMPFEAD 442
Query: 183 ESMATALISMYMKCGQPSWARR-FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
A++S MK G + E+ PDD + + + + Y + G ++ +I +
Sbjct: 443 LLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLM 502
Query: 242 MQQEKVK 248
M+Q VK
Sbjct: 503 MRQRGVK 509
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 21/209 (10%)
Query: 79 LTWNTMIAGMMLNGRS---EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
T + +IA L+G S + A +F + H P+ + ++I GFS E+ L
Sbjct: 39 FTVSRLIAFCSLSGVSGGLDYASSVFSRIQH----PNSFIFFALIKGFSDTSNPVESLIL 94
Query: 136 FEKM-----QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ +M S+G+ S + SVL AC L A G++ HG V++ L D + +++
Sbjct: 95 YARMLSCLNYSSGVEFS---IPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMV 151
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY+ G+ ARR FD+ + D WN+MI+GY + GE E A E+FD M + +
Sbjct: 152 RMYIDFGEIELARRVFDRMPNR--DVVSWNSMIAGYLKAGEIELASELFDEMPERDL--- 206
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDD 279
S A++ G G + A ++F M D
Sbjct: 207 -VSCNAMIDGYGKCGRCELAEKVFETMSD 234
>gi|293335745|ref|NP_001168519.1| uncharacterized protein LOC100382299 [Zea mays]
gi|223948835|gb|ACN28501.1| unknown [Zea mays]
Length = 599
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 39/387 (10%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PNS T + ACA++ GRQ+H L+ + + T L+++Y KC + A
Sbjct: 121 SPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALA 180
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + G +N++ W+ +M+SG+S+
Sbjct: 181 RTVFDGMAGDKNLVAWS-----------------------------------AMVSGYSR 205
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+GM EA LF +MQ+ G+ P + SV+SACA AL LGK H ++ R + D +
Sbjct: 206 VGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLEL 265
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TALI MY KCG AR FD K D W+AMI G+ +G E A+ +F M +
Sbjct: 266 STALIDMYAKCGLIERARGVFDAMVEK--DTKAWSAMIVGFAIHGLVEDALGLFSRMLEL 323
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KV+PN+ +F+ VLSAC H+G V+ + +++M + G+KP E++GCMVDLL RSG LD+
Sbjct: 324 KVRPNNVTFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDD 382
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + +P P ++ +LL AC D+ E +L E+EP NP +V+LSN+YA
Sbjct: 383 AYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYAS 442
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
+W+ V +R+ + + +T + G S+
Sbjct: 443 NSQWDRVSYLRRKMKGKNVTAIAGRSS 469
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN+VTFI V+SACA ++ GR+ + + + +VD+ + G L
Sbjct: 323 LKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDD 382
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
A++ + S N + W T++ + R + A
Sbjct: 383 AYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIA 415
>gi|218190515|gb|EEC72942.1| hypothetical protein OsI_06806 [Oryza sativa Indica Group]
Length = 1030
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/383 (36%), Positives = 219/383 (57%), Gaps = 11/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT +++I ++ ++ ++ HG +L++ D+ + A++D Y KCG L A +F
Sbjct: 506 DSVTILNIIRM-STFCGIKMVQESHGYSLRVGYTGDSSVANAILDAYAKCGYLHDAETLF 564
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ L G RNI+T NTMI+ + N E A F +A + D TWN M ++Q +
Sbjct: 565 RSLAG-RNIVTGNTMISCYLKNNCVEDAEMTFNHMA----EKDLTTWNLMSRLYAQNDLC 619
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+AF LF ++QS G+ P +T++LSAC LS+++L K+ HG+++RA L +D + AL
Sbjct: 620 DQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYMLRASL-EDIHLEGAL 678
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ Y KCG + A F Q + D F AMI Y +G E AVE+F M +KP
Sbjct: 679 LDAYSKCGNIANAYNLF-QVSLHKDLVIF-TAMIGAYAMHGMAEKAVELFSKMLTLDIKP 736
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ A+LSAC HAG VD ++IF + + +G++P +EH CMVDLL RSGRL +A
Sbjct: 737 DHVVLTALLSACSHAGLVDAGIKIFKSIREIYGVEPTEEHCACMVDLLARSGRLQDAYSF 796
Query: 310 IRELPEPTV--SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++P V + + SLLGAC H +G+ A +L ME E+ +VI+SNI+A +
Sbjct: 797 ALDMPPHVVNANAWGSLLGACKVHGEVKIGQLAADRLFSMEAEDIGNYVIMSNIFAADDK 856
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE V +R+++ + + K G S
Sbjct: 857 WESVEHVRKLMKSKDMKKPAGCS 879
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 145/326 (44%), Gaps = 46/326 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P +VT V+ CA L L+ GR +HG +K + DT+ G ALV MY KCG
Sbjct: 196 PTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLEFDTLSGNALVSMYAKCG-------- 247
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP----DPATWNSMISGFS 124
AM+ AH F D +WNS+I+G+S
Sbjct: 248 -------------------------GSIAMDD----AHLAFSTICCKDVVSWNSIIAGYS 278
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKDE 183
+ G+ EA LF +M S +P+ + +VL C+ + GKE HG V+R L D
Sbjct: 279 ENGLFEEALALFGQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDI 338
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S++ AL++ Y K + F K D WN +I+GY N A+++F +
Sbjct: 339 SVSNALMAHYSKVCEMRAVESIFRSS--KMGDIVTWNTVIAGYVMNRYPSRALKLFQGLL 396
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ P+S S +++L+AC G++ +++ + L + +V + R
Sbjct: 397 FAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRF 456
Query: 304 DEA-RELIRELPEPTVSVYHSLLGAC 328
D A R I + +VS ++++L AC
Sbjct: 457 DAAFRSFITIQNKDSVS-WNAILSAC 481
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 8 EPNSVTFISVISACASLLYLQ----FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
PN + + + + ++L + GR +HGL +K+ ++ A++DMY + G L
Sbjct: 87 RPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKVGYADGAVVAKAVMDMYGRIGSLA 146
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH VF E+ S D N +I+
Sbjct: 147 DAHTVFDEMSCS------------------------------------DAVCRNILITAS 170
Query: 124 SQLGMRFEAFKLFEKMQSTGM---VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
S+ G+ + F LF M ++G+ +P+ V VL CA L L+ G+ HG+VI+ L
Sbjct: 171 SRAGLYNDVFHLFRAMLASGVDESMPTAVTVAVVLPVCAKLRVLRAGRSIHGYVIKTGLE 230
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D AL+SMY KCG F I D WN++I+GY NG +E A+ +F
Sbjct: 231 FDTLSGNALVSMYAKCGGSIAMDDAHLAFSTICCKDVVSWNSIIAGYSENGLFEEALALF 290
Query: 240 DLMQQEKVKPNSASFVAVLSACG---HAGHVDKALQIFTM 276
M E+ PN ++ VL C + H K + F +
Sbjct: 291 GQMISEECLPNYSTLANVLPFCSLVEYGRHYGKEIHGFVV 330
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 61/371 (16%)
Query: 2 KECLSDEPNSVTFISVISACASLLY-LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+ECL PN T +V+ C+ + Y +G+++HG ++ + D + AL+ Y K
Sbjct: 296 EECL---PNYSTLANVLPFCSLVEYGRHYGKEIHGFVVRHGLEMDISVSNALMAHYSKVC 352
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ ++F RS K D TWN++I
Sbjct: 353 EMRAVESIF-----------------------RSSK-------------MGDIVTWNTVI 376
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADL 179
+G+ A KLF+ + GM P + S+L+ACA + L++G HG++ R +L
Sbjct: 377 AGYVMNRYPSRALKLFQGLLFAGMAPDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPEL 436
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAVEI 238
++ S+ AL+S Y +C + A R F I+ D WNA++S + + E +
Sbjct: 437 LQETSLMNALVSFYSQCDRFDAAFRSF--ITIQNKDSVSWNAILSACANSEHHIEQFFRL 494
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG------C 292
M + + +S + + ++ G M+ + G + + G
Sbjct: 495 LGEMWHDVTQWDSVTILNIIRMSTFCG--------IKMVQESHGYSLRVGYTGDSSVANA 546
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
++D + G L +A L R L + ++++ C+L ++ E+ M M ++
Sbjct: 547 ILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMIS---CYLKNNCVEDAEMTFNHMAEKDL 603
Query: 353 TPFVILSNIYA 363
T + ++S +YA
Sbjct: 604 TTWNLMSRLYA 614
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 159/393 (40%), Gaps = 77/393 (19%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+SV+ IS+++ACA + L+ G +VHG + E +T + ALV Y +C A
Sbjct: 402 PDSVSLISLLTACAQVGNLRVGIRVHGYIFRHPELLQETSLMNALVSFYSQCDRFDAAFR 461
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ +++ ++WN +++ SE +E F L E + D W+S+
Sbjct: 462 SFITIQ-NKDSVSWNAILSAC---ANSEHHIEQFFRLLGEMWH-DVTQWDSV-------- 508
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ + + + C +K+ +E+HG+ +R D S+A
Sbjct: 509 -------------------TILNIIRMSTFC----GIKMVQESHGYSLRVGYTGDSSVAN 545
Query: 188 ALISMYMKCGQPSWARRFFDQF-----------------------------EIKPDDPAF 218
A++ Y KCG A F + D
Sbjct: 546 AILDAYAKCGYLHDAETLFRSLAGRNIVTGNTMISCYLKNNCVEDAEMTFNHMAEKDLTT 605
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN M Y +N + A +F +Q E + P++ S +LSAC H V Q M
Sbjct: 606 WNLMSRLYAQNDLCDQAFCLFHQLQSEGLNPDTISITNILSACIHLSSVQLVKQCHGYM- 664
Query: 279 DDFGLKPKQEHF---GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
L+ E G ++D + G + A L + + ++ +++GA H ++
Sbjct: 665 ----LRASLEDIHLEGALLDAYSKCGNIANAYNLFQVSLHKDLVIFTAMIGAYAMHGMAE 720
Query: 336 LGEEMAMKL--QEMEPENPTPFVILSNI-YAGL 365
E+ K+ +++P++ +LS +AGL
Sbjct: 721 KAVELFSKMLTLDIKPDHVVLTALLSACSHAGL 753
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 210/371 (56%), Gaps = 26/371 (7%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + A++ Y + G + A +F ++ +N ++WN ++A + NGR E A LFE
Sbjct: 54 ERDIVSWNAMLSGYAQNGFVDEAREIFYKMP-LKNGISWNGLLAAYVQNGRIEDAKRLFE 112
Query: 103 GLAH----------EGF------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQ 140
GF + D +W++MI+G+SQ G EA F +MQ
Sbjct: 113 SKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQ 172
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+ T LS C++++AL+LG++ H +++A + AL++MY KCG
Sbjct: 173 RDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSID 232
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
AR F EI D WN MI GY R+G E A+ +F+LM+ ++P+ A+ V+VL+A
Sbjct: 233 EARDAFQ--EILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAA 290
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVS 319
C HAG VD+ + F M+ D+G+ K H+ CMVDLLGR+G+L+EA+ L++ +P EP +
Sbjct: 291 CSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAA 350
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
+ +LLGA H N++LGE+ A + EMEP N +++LS +YA GRW D G++R +
Sbjct: 351 TWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMR 410
Query: 380 DRQLTKLPGIS 390
++ + K+PG S
Sbjct: 411 NKGVKKVPGYS 421
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 139/326 (42%), Gaps = 26/326 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F +S C+++ L+ GRQ+H +K Q+ +G AL+ MY KCG + A + F
Sbjct: 179 NRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAF 238
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
QE+ +++++WNTMI G +G E+A+ +FE + G +PD AT S+++ S G+
Sbjct: 239 QEIL-EKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLV 297
Query: 130 FEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ + F M T + C+ +L L +E + D +
Sbjct: 298 DQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQL------EEAQNLMKNMPFEPDAAT 351
Query: 186 ATALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ G + FE++P + + + Y +G + A ++ M+
Sbjct: 352 WGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRN 411
Query: 245 EKVKPNSA-SFVAV--------LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+ VK S++ V + H H DK MD LK KQE + +
Sbjct: 412 KGVKKVPGYSWLEVQNKIHTFKVGDTSHP-HTDKIYTFLEEMD----LKLKQEGYISSTN 466
Query: 296 LLGRSGRLDEARELIRELPEPTVSVY 321
L+ +E +++ E Y
Sbjct: 467 LVFHDVEEEEKVHMLKYHSEKLAVAY 492
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 32/321 (9%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
++ YL+ A ++F ++ R++ +WN M+ G + N + A LFE + +
Sbjct: 1 MISGYLRNHKFDLARDLFDKMP-ERDLFSWNVMLTGYVRNRDLKTARALFERMP----ER 55
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WN+M+SG++Q G EA ++F KM L + L +
Sbjct: 56 DIVSWNAMLSGYAQNGFVDEAREIFYKMP--------------LKNGISWNGLLAAYVQN 101
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNG 230
G + A + M L+S C + R+ + F+ P D W+AMI+GY +NG
Sbjct: 102 GRIEDAKRLFESKMDWTLVS--WNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNG 159
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
E A+ F MQ++ + N +SF LS C + ++ Q+ + G +
Sbjct: 160 CSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKA-GYQTGWYVG 218
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-----AMKLQ 345
++ + + G +DEAR+ +E+ E V +++++ + GEE MK
Sbjct: 219 NALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHG---YARHGFGEEALTVFELMKTT 275
Query: 346 EMEPENPTPFVILSNI-YAGL 365
+ P++ T +L+ +AGL
Sbjct: 276 GIRPDDATMVSVLAACSHAGL 296
>gi|224079119|ref|XP_002305756.1| predicted protein [Populus trichocarpa]
gi|222848720|gb|EEE86267.1| predicted protein [Populus trichocarpa]
Length = 530
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 219/386 (56%), Gaps = 14/386 (3%)
Query: 7 DEPNSVTFISVISACAS----LLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ P+ TF ++ A S +L G VH LK++ ++D ++ TALVD Y+K G +
Sbjct: 139 ERPDGFTFSMILKASTSGANVMLPRNTGGLVHAQILKLDVKADDVLYTALVDSYVKSGKV 198
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF +L +N++ +MI+G M G E A E+F + + D +N+MI G
Sbjct: 199 GYARKVF-DLMLEKNVICSTSMISGYMNQGFVEDAEEIF----WKTVEKDIVVFNAMIEG 253
Query: 123 FSQ-LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+S+ + +A +++ MQ G+ P+ SV AC+ L+ ++G++ ++++
Sbjct: 254 YSKSVETAMKALEVYVDMQRFGLRPNGSTFASVSGACSVLAGFEIGQQVQCQLMKSGFFN 313
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +ALI MY KCG+ ARR F+ ++ + W +MI GYG+NGE A+E+F
Sbjct: 314 GVKMGSALIDMYSKCGRIEDARRVFNYMPVR--NVFSWTSMIDGYGKNGEPWEALELFHR 371
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQQ ++PN +F+ LSACGHAG V K +IF M+ D+ KP+ EH+ CMVDLLGR+G
Sbjct: 372 MQQCNIEPNYVTFLGALSACGHAGLVTKGREIFDSMERDYSTKPRMEHYACMVDLLGRAG 431
Query: 302 RLDEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP-ENPTPFVILS 359
L +A EL++ +PE P V+ +LL +C H N ++ A KL ++ P +V LS
Sbjct: 432 NLQQAWELVKGMPEKPNSDVWAALLSSCNMHGNVEMARVAANKLFKINAIGRPGAYVALS 491
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTK 385
N A RW+ V +R+M+ R ++K
Sbjct: 492 NTLAAAERWDSVSELREMMKLRGISK 517
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 145/332 (43%), Gaps = 75/332 (22%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM 89
G+++H LK + + I L+ ++LKC CL AH +F EL R + +N MI G +
Sbjct: 61 GQKIHTHILKTGFRPNINISIKLLILHLKCRCLKYAHQLFDELP-QRTLSAYNYMIGGYL 119
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG---MVP 146
G E+++ + L +G +PD GF+ F + K ++G M+P
Sbjct: 120 RQGLFEESISMVRRLDLDGERPD---------GFT--------FSMILKASTSGANVMLP 162
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
G H +++ D+ D+ + TAL+ Y+K G+ +AR+ F
Sbjct: 163 R-----------------NTGGLVHAQILKLDVKADDVLYTALVDSYVKSGKVGYARKVF 205
Query: 207 D-------------------QFEIKPDDPAFW----------NAMISGYGRNGEYE-SAV 236
D Q ++ + FW NAMI GY ++ E A+
Sbjct: 206 DLMLEKNVICSTSMISGYMNQGFVEDAEEIFWKTVEKDIVVFNAMIEGYSKSVETAMKAL 265
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDF--GLKPKQEHFGCM 293
E++ MQ+ ++PN ++F +V AC + Q+ +M F G+K +
Sbjct: 266 EVYVDMQRFGLRPNGSTFASVSGACSVLAGFEIGQQVQCQLMKSGFFNGVKMGS----AL 321
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+D+ + GR+++AR + +P V + S++
Sbjct: 322 IDMYSKCGRIEDARRVFNYMPVRNVFSWTSMI 353
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 209/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT+ S+++AC+S L++GR++H ++ +D +G LV+MY CG + A
Sbjct: 426 EPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQ 485
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D +N+MI G++
Sbjct: 486 VFDRM------------------------------------IQRDIVAYNAMIGGYAAHN 509
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA KLF+++Q G+ P ++L+ACA+ +L+ +E H V + D S+
Sbjct: 510 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGN 569
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S Y KCG S A F++ + + WNA+I G ++G + A+++F+ M+ E V
Sbjct: 570 ALVSTYAKCGSFSDASIVFEKMTKR--NVISWNAIIGGSAQHGRGQDALQLFERMKMEGV 627
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +FV++LSAC HAG +++ + F M DF + P EH+GCMVDLLGR+G+LDEA
Sbjct: 628 KPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAE 687
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI+ +P + ++ +LLGAC H N + E A +++ +N +V LS++YA G
Sbjct: 688 ALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAG 747
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ ++R+++ R +TK PG S
Sbjct: 748 MWDSAAKLRKLMEQRGVTKEPGRS 771
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 163/346 (47%), Gaps = 42/346 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T+ISV++A +S L++G+ VH L +SDT +GTALV MY KCG V
Sbjct: 225 PNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F++L D WN+MI G ++ G
Sbjct: 285 FEKL------------------------------------VNRDLIAWNTMIGGLAEGGY 308
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +++ +MQ G++P+ +L+AC + +AL GKE H V +A D + A
Sbjct: 309 WEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNA 368
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY +CG AR FD+ K D W AMI G ++G A+ ++ MQQ V+
Sbjct: 369 LISMYSRCGSIKDARLVFDKMVRK--DVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ ++L+AC ++ +I + + GL +V++ G + +AR+
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDARQ 485
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + + + Y++++G H +LG+E ++ E P
Sbjct: 486 VFDRMIQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKP 528
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 177/360 (49%), Gaps = 42/360 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T++ +++AC + L +G+++H K SD + AL+ MY +CG + A V
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + D +W +MI G ++ G
Sbjct: 386 FDKM------------------------------------VRKDVISWTAMIGGLAKSGF 409
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++++MQ G+ P+ TS+L+AC+ +AL+ G+ H V+ A L D +
Sbjct: 410 GAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNT 469
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY CG AR+ FD+ I+ D A+ NAMI GY + + A+++FD +Q+E +K
Sbjct: 470 LVNMYSMCGSVKDARQVFDRM-IQRDIVAY-NAMIGGYAAHNLGKEALKLFDRLQEEGLK 527
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +++ +L+AC ++G ++ A +I T++ G +V + G +A
Sbjct: 528 PDKVTYINMLNACANSGSLEWAREIHTLVRKG-GFFSDTSVGNALVSTYAKCGSFSDASI 586
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGL 365
+ ++ + V +++++G H ++ MK++ ++P+ T +LS +AGL
Sbjct: 587 VFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGL 646
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 179/419 (42%), Gaps = 83/419 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ NS ++ ++ C + L GRQVH ++ D AL++MY++CG + A
Sbjct: 20 QVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQ 79
Query: 68 VFQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT----------- 115
V+++L R + +WN M+ G + G EKA++L + G PD T
Sbjct: 80 VWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSP 139
Query: 116 ----W--------------------NSMISGFSQLGMRFEAFKLFEKMQST--------- 142
W N +++ +++ G EA ++F+KM+
Sbjct: 140 GALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITI 199
Query: 143 ----------------------GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+VP+ SVL+A + +ALK GK H ++ A
Sbjct: 200 GGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHE 259
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ TAL+ MY KCG R+ F++ + D WN MI G G +E A E+++
Sbjct: 260 SDTAVGTALVKMYAKCGSYKDCRQVFEKLVNR--DLIAWNTMIGGLAEGGYWEEASEVYN 317
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----DDDFGLKPKQEHFGCMVD 295
MQ+E V PN ++V +L+AC ++ + +I + + D G++ ++
Sbjct: 318 QMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ------NALIS 371
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ R G + +AR + ++ V + +++G S G E QEM+ P
Sbjct: 372 MYSRCGSIKDARLVFDKMVRKDVISWTAMIGGL---AKSGFGAEALTVYQEMQQAGVEP 427
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 110/226 (48%), Gaps = 10/226 (4%)
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A + + +Q G + +L C ++ L G++ H H+I+ D+ ALI+
Sbjct: 7 AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY++CG AR+ + + WNAM+ GY + G E A+++ MQQ + P+
Sbjct: 67 MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126
Query: 252 ASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ ++ LS+C G ++ +I F M GL + C++++ + G ++EARE+
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQA--GLLFDVKVANCILNMYAKCGSIEEAREVF 184
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGE-EMAMKL-QEMEPENPTP 354
++ + +V + +G +D G E A ++ Q+ME E P
Sbjct: 185 DKMEKKSVVSWTITIGG-----YADCGRSETAFEIFQKMEQEGVVP 225
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 200/387 (51%), Gaps = 42/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN VTFI++++A +S L G Q+H L LK D I AL+ Y KC +
Sbjct: 656 RPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEI 715
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R D +WNSMISG+ G
Sbjct: 716 IFSRMSERR-----------------------------------DEVSWNSMISGYLHSG 740
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A L M G +VLSACA ++ L+ G E H +RA L D + +
Sbjct: 741 ILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGS 800
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG+ +A RFF+ ++ + WN+MISGY R+G + A++IF M+Q
Sbjct: 801 ALVDMYAKCGKIDYASRFFELMPVR--NIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +FV VLSAC H G VD+ + F M + +GL P+ EHF CMVDLLGR+G + +
Sbjct: 859 SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHL---NSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ I+ +P +P + ++ ++LGAC C N++LG+ A L E+EP+N +V+LSN++A
Sbjct: 919 DFIKTMPMDPNILIWRTVLGAC-CRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHA 977
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G WEDV R + + K G S
Sbjct: 978 AGGNWEDVVEARLAMRKAAVKKDAGCS 1004
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 56/288 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGR----QVHGLTLKIE-KQSDTMIGTALVDMYLKCGCL 62
E NS + + ++S L+ G+ +VH + + IG ALV+MY KC +
Sbjct: 448 EINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAI 507
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +VFQ + D +WNSMISG
Sbjct: 508 DNACSVFQLMPS------------------------------------KDTVSWNSMISG 531
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
EA F M+ GMVPS V S LS+C+ L L LG++ HG + L+ D
Sbjct: 532 LDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLD 591
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV----EI 238
S++ AL+++Y + + ++ F F++ D WN+ I G +YE++V +
Sbjct: 592 VSVSNALLTLYAETDSINECQKVF--FQMPEYDQVSWNSFI---GALAKYEASVLQALKY 646
Query: 239 FDLMQQEKVKPNSASFVAVLSACGH-----AGHVDKALQI-FTMMDDD 280
F M Q +PN +F+ +L+A GH AL + +++ DD+
Sbjct: 647 FLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDN 694
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
NT+I + G A +LF+ + + +W+ +ISG++Q M EA LF+ + S
Sbjct: 179 NTLINIYVRIGNLVSARKLFDEMPQKNL----VSWSCLISGYTQNRMPDEACSLFKGVIS 234
Query: 142 TGMVPSLKCVTSVLSACADL--SALKLGKETHGHVIRADLNKDESMATALISMYMKC-GQ 198
+G++P+ V S L AC + +KLG + H + + D ++ L+SMY C G
Sbjct: 235 SGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGS 294
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV----KPNSASF 254
A R FD EIK + WN++IS Y R G+ SA ++F +MQ E V +PN +
Sbjct: 295 IDDAHRVFD--EIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTL 352
Query: 255 VAVLSACGHAGHVDKAL--QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++++A L Q+ T ++ G +V+ R G +D A+ + ++
Sbjct: 353 CSLVTAACSLADCGLVLLEQMLTRIEKS-GFLRDLYVGSALVNGFARYGLMDCAKMIFKQ 411
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ + + L+ GEE A +EM+
Sbjct: 412 MYDRNAVTMNGLMVGL---ARQHQGEEAAKVFKEMK 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 52/378 (13%)
Query: 9 PNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC-GCLPCA 65
PN S + AC ++ G Q+H K+ SD ++ L+ MY C G + A
Sbjct: 239 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDA 298
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H VF E+K RN +TWN++I+ G + A +LF + EG +
Sbjct: 299 HRVFDEIK-FRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV---------------E 342
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS--ALKLGKETHGHVIRADLNKDE 183
L +R P+ + S+++A L+ L L ++ + ++ +D
Sbjct: 343 LNLR----------------PNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDL 386
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +AL++ + + G A+ F Q + + N ++ G R + E A ++F M
Sbjct: 387 YVGSALVNGFARYGLMDCAKMIFKQ--MYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM- 443
Query: 244 QEKVKPNSASFVAVLSACGHAGHVD----KALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
++ V+ NS S V +LS ++ K ++ + + + +V++ G+
Sbjct: 444 KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGK 503
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA----MKLQEMEPENPTPF 355
+D A + + +P ++S++ N E ++ MK M P N +
Sbjct: 504 CTAIDNACSVFQLMPSKDTVSWNSMISG--LDHNERFEEAVSCFHTMKRNGMVPSNFSVI 561
Query: 356 VILSNIYAGLGRWEDVGR 373
LS+ + LG W +GR
Sbjct: 562 STLSSC-SSLG-WLTLGR 577
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
S+L H + + D LI++Y++ G AR+ FD E+ + W+
Sbjct: 154 SSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFD--EMPQKNLVSWSC 211
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
+ISGY +N + A +F + + PN + + L AC G
Sbjct: 212 LISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCG 255
>gi|224123726|ref|XP_002330193.1| predicted protein [Populus trichocarpa]
gi|222871649|gb|EEF08780.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 206/386 (53%), Gaps = 10/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++ AC+SL LQ G+ +H L + + + I ++++Y CG + A V
Sbjct: 105 PDEYTLAPLLKACSSLGVLQLGKCMHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKV 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+++ WN MI G G + + LF + K +WN MIS +Q
Sbjct: 165 FDEMY-QRDVIVWNLMIHGFCKRGDVDMGLCLFRQMR----KRSVVSWNIMISCLAQSRR 219
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD-ESMAT 187
EA LF M G P V +VL CA L ++ +GK H + + L +D ++
Sbjct: 220 DSEALGLFHDMLDWGFKPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGN 279
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ Y K G ARR FD E+ + WN +ISG NG E VE+ + M E V
Sbjct: 280 ALVDFYNKSGMFETARRVFD--EMPRKNVISWNTLISGLALNGNGELGVELLEEMMNEGV 337
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN A+FV VLS C HAG ++ ++ M + ++PK EH+GCMVDLLGRSG + EA
Sbjct: 338 RPNDATFVGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEHYGCMVDLLGRSGCVREAY 397
Query: 308 ELIRELP--EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LIR +P P +++ SLL AC H + +L +L ++EP N +V+LSN+YA
Sbjct: 398 DLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLAVKELIDLEPWNSGNYVLLSNMYAEE 457
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
RW+ V +R M+ ++ + K PG S
Sbjct: 458 ERWDKVANVRGMMREKNVKKTPGQSV 483
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P +N+MI G+S G E+F+LF M++ G+ P + +L AC+ L L+LGK
Sbjct: 69 NPTIILFNAMIKGYSLNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLGVLQLGKC 128
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H V+ ++ +I +Y CG A + FD E+ D WN MI G+ +
Sbjct: 129 MHKEVLVVGFEGFSAIRIGVIELYSSCGVMEDAEKVFD--EMYQRDVIVWNLMIHGFCKR 186
Query: 230 GEYESAVEIFDLMQQEKV-------------------------------KPNSASFVAVL 258
G+ + + +F M++ V KP+ A+ V VL
Sbjct: 187 GDVDMGLCLFRQMRKRSVVSWNIMISCLAQSRRDSEALGLFHDMLDWGFKPDEATVVTVL 246
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
C G VD I + + +VD +SG + AR + E+P V
Sbjct: 247 PICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETARRVFDEMPRKNV 306
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+++L+ + N +LG E+ L+EM E P
Sbjct: 307 ISWNTLISGLALNGNGELGVEL---LEEMMNEGVRP 339
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 114/282 (40%), Gaps = 55/282 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD-TMIGTALVDMYLKCGCLPCAH 66
+P+ T ++V+ CA L + G+ +H D +G ALVD Y K G A
Sbjct: 236 KPDEATVVTVLPICARLGSVDVGKWIHSYAKSSGLYRDFVAVGNALVDFYNKSGMFETAR 295
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +N+++WNT+I+G+ LNG E +EL E + +EG +P+ AT+
Sbjct: 296 RVFDEMP-RKNVISWNTLISGLALNGNGELGVELLEEMMNEGVRPNDATF---------- 344
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE-----THGHVIRADLNK 181
VLS CA + G+E H I L
Sbjct: 345 -------------------------VGVLSCCAHAGLFERGRELLASMVEHHQIEPKLEH 379
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPD---DPAFWNAMISGYGRNGEYESA-VE 237
M L G+ R +D I P + A W +++S +G+ E A +
Sbjct: 380 YGCMVDLL-------GRSGCVREAYDLIRIMPGGAPNAALWGSLLSACRTHGDVELAHLA 432
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
+ +L+ E NS ++V + + DK + MM +
Sbjct: 433 VKELIDLEPW--NSGNYVLLSNMYAEEERWDKVANVRGMMRE 472
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+E H H +R LN+ + + +S+ + ++A R F Q + P F NAMI GY
Sbjct: 26 REIHAHFLRHGLNQLNQILSHFVSICGSLNKMAYANRIFKQTQ-NPTIILF-NAMIKGYS 83
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
NG +E + +F M+ + P+ + +L AC G LQ+ M + L
Sbjct: 84 LNGPFEESFRLFSSMKNRGIWPDEYTLAPLLKACSSLG----VLQLGKCMHKEV-LVVGF 138
Query: 288 EHFGCM----VDLLGRSGRLDEARELIRELPEPTVSVYHSLL-GAC 328
E F + ++L G +++A ++ E+ + V V++ ++ G C
Sbjct: 139 EGFSAIRIGVIELYSSCGVMEDAEKVFDEMYQRDVIVWNLMIHGFC 184
>gi|414880007|tpg|DAA57138.1| TPA: hypothetical protein ZEAMMB73_430226 [Zea mays]
Length = 648
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 206/387 (53%), Gaps = 39/387 (10%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PNS T + ACA++ GRQ+H L+ + + T L+++Y KC + A
Sbjct: 170 SPRPNSFTLAFALKACAAVPAPGEGRQLHAQALRQGLATSAYVQTGLLNLYAKCEQVALA 229
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + G +N++ W+ +M+SG+S+
Sbjct: 230 RTVFDGMAGDKNLVAWS-----------------------------------AMVSGYSR 254
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+GM EA LF +MQ+ G+ P + SV+SACA AL LGK H ++ R + D +
Sbjct: 255 VGMVNEALGLFREMQAVGVEPDEVTMVSVISACAKAGALDLGKWVHAYIDRKGITVDLEL 314
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TALI MY KCG AR FD K D W+AMI G+ +G E A+ +F M +
Sbjct: 315 STALIDMYAKCGLIERARGVFDAMVEK--DTKAWSAMIVGFAIHGLVEDALGLFSRMLEL 372
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KV+PN+ +F+ VLSAC H+G V+ + +++M + G+KP E++GCMVDLL RSG LD+
Sbjct: 373 KVRPNNVTFIGVLSACAHSGLVEDGRRYWSIM-QNLGIKPSMENYGCMVDLLCRSGLLDD 431
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + +P P ++ +LL AC D+ E +L E+EP NP +V+LSN+YA
Sbjct: 432 AYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIAESATKRLLELEPHNPENYVLLSNLYAS 491
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
+W+ V +R+ + + +T + G S+
Sbjct: 492 NSQWDRVSYLRRKMKGKNVTAIAGRSS 518
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN+VTFI V+SACA ++ GR+ + + + +VD+ + G L
Sbjct: 372 LKVRPNNVTFIGVLSACAHSGLVEDGRRYWSIMQNLGIKPSMENYGCMVDLLCRSGLLDD 431
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
A++ + S N + W T++ + R + A
Sbjct: 432 AYSFVIGMPVSPNSVIWRTLLVACKSSNRIDIA 464
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 204/365 (55%), Gaps = 40/365 (10%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ G+ H ++K ++ + AL+ MY +CG A +F +K
Sbjct: 436 LRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK------------- 482
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
D TW+++IS +S LG +A L+++M + G+ P
Sbjct: 483 -----------------------TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ + SV+S+CA+L+AL+ G+ H HV L D S+ TAL+ MYMKCGQ AR+ F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D + D WN MISGYG +GE A+++F +M++ VKPNS +F+A+LSAC HAG
Sbjct: 580 DS--MLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGL 637
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLL 325
VDK ++FT M +++ L+P +H+ CMVDLLG+SG L EA +++ +P EP ++ +LL
Sbjct: 638 VDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
GAC H N ++G +A K +PEN ++++SN Y +W ++ ++R M+ + + K
Sbjct: 697 GACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEK 756
Query: 386 LPGIS 390
G S
Sbjct: 757 SIGWS 761
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V +++ + ++ G+ H ++ +IG AL+ MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ML+ R D +W+SM+ + + G
Sbjct: 373 VFR------------------MLHQR------------------DTDSWSSMVVAYCKAG 396
Query: 128 MRFEAFKLFEKMQ---STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + +L+ +MQ + S++S+C+ L L+LG+ H + I+ ++ S
Sbjct: 397 LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSS 456
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A ALISMY +CG AR+ F +K D W+A+IS Y G + A+ ++D M
Sbjct: 457 VANALISMYGRCGNFDVARKIFGM--VKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E VKPNSA+ V+V+S+C + ++ I + + D GL+ +VD+ + G+L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHV-KDVGLECDLSICTALVDMYMKCGQLG 573
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEM------EPENPTPFVI 357
AR++ + E V ++ ++ H GE + A+KL M +P + T I
Sbjct: 574 IARKMFDSMLERDVVTWNVMISGYGMH-----GEAIQALKLFSMMERGNVKPNSLTFLAI 628
Query: 358 LSN-IYAGL 365
LS +AGL
Sbjct: 629 LSACCHAGL 637
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 35/259 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T +SVIS+CA+L L+ G +H + + D I TALVDMY+KCG L A
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARK 577
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI+G ++G + +A++LF + KP+ T+ +++S G
Sbjct: 578 MFDSML-ERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + +LF +M+ + P+LK ++ DL LGK H L + E + +
Sbjct: 637 LVDKGRELFTRMEEYSLEPNLKHYACMV----DL----LGKSGH-------LQEAEDVVS 681
Query: 188 ALISMYMKCGQPSW-----ARRFFDQFEI-----------KPDDPAFWNAMISGYGRNGE 231
A M ++ W A + D FE+ P++ ++ M + YG +
Sbjct: 682 A---MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEK 738
Query: 232 YESAVEIFDLMQQEKVKPN 250
+ ++ D+M+ V+ +
Sbjct: 739 WNEIEKLRDMMKNHGVEKS 757
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
P+ T V SA A L L G VH +++ +E + ++LV MY +CG +
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ R+++ W +I+G + NG+ EGL++
Sbjct: 164 AVRLFDEMP-ERDVVAWTAVISGCVCNGQCG------EGLSY------------------ 198
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
++ G P+ + + S L AC L L +G HG ++A + S
Sbjct: 199 -------LVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++L SMY KC AR F E+ D W ++I Y R G E AVE+F M++
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFP--ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 245 EKVKPNSASFVAVLSACGHAGHV 267
++P+ +L+ G+ V
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKV 332
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 24/269 (8%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD WNS++ + +M+++G PS V SA A+L AL +G
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 171 HGHVIRADLNKDE---SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
H + +R L + + ++A++L+ MY +CG A R FD E+ D W A+ISG
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFD--EMPERDVVAWTAVISGCV 187
Query: 228 RNGEYESAVEIFDLMQQEK----VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
NG+ + M + +PNS + + L ACG G L + T + FG+
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE----LSVGTCL-HGFGV 242
Query: 284 KPKQEHFGCMVDLL----GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
K H +V L + ++AR L ELPE + + SL+GA +++ E
Sbjct: 243 KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVE 302
Query: 340 MAMKLQE--MEPENPTPFVILSNIYAGLG 366
+ + ++E ++P+ V++S + AGLG
Sbjct: 303 LFLGMEESGLQPDE----VVISCLLAGLG 327
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 38/236 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T S + AC L L G +HG +K + ++L MY KC A
Sbjct: 212 RPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARI 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL +++++W ++I G +EKA+ELF G+ G +PD + +++G
Sbjct: 272 LFPELP-EKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGL---- 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + ++ GK H ++R + +
Sbjct: 327 -------------------------------GNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
ALISMY KC Q A F + D W++M+ Y + G +E++ MQ
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDS--WSSMVVAYCKAGLDLKCLELYREMQ 409
>gi|413945386|gb|AFW78035.1| hypothetical protein ZEAMMB73_343828 [Zea mays]
Length = 608
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 218/395 (55%), Gaps = 12/395 (3%)
Query: 1 MKECLSDE---PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYL 57
++ LSD+ P+ S+ SA L L+ GRQ+H +D ++ ++L+DMY
Sbjct: 90 LRRMLSDDALRPDHFVLASLASAAGRLRSLRLGRQLHAHFAASPYSADNVVKSSLIDMYC 149
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
KCG A VF + G +N + W +I+G NG + +A++LF+ + G TW
Sbjct: 150 KCGVPQDARKVFDSI-GVKNSVVWTALISGYASNGCTGEALDLFQSMPAHGL----FTWT 204
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
++ISGF + G A LF +M+ + + + +V+ ADL+AL LG++ HG V+R
Sbjct: 205 ALISGFVKAGNYTGAMGLFVEMRRDDIRIHDAFVLATVIGGAADLAALVLGRQLHGFVMR 264
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
+ AL+ MY KC AR F+ ++ D W ++ G ++G E
Sbjct: 265 LGFLSSMIVGNALVDMYSKCSDIHSAREVFEGITVR--DVISWTTILVGEAQHGRAEEVF 322
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+++ M +KPN +FV ++ AC HAG V K Q+F M ++G+KP +H+ C +DL
Sbjct: 323 ALYNRMLLAGMKPNEVTFVGLIYACSHAGLVQKGRQLFDSMKREYGMKPGVQHYTCYLDL 382
Query: 297 LGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
L RSG L EA +LI +P EP + + +LL AC H ++ + +A L E+ P++P+ +
Sbjct: 383 LSRSGYLSEAEKLITTMPYEPDEATWGALLSACKKHNDTQMCLRVADNLLELRPKDPSTY 442
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++LSN+YA +W+ V ++R+++ + ++ K+PG S
Sbjct: 443 ILLSNVYAVNCKWDSVAKVRKIMAEMEIRKVPGYS 477
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 222/416 (53%), Gaps = 40/416 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT +++SA A L+FG++V ++ +SD ++ + +DMY KCG + A VF
Sbjct: 376 VTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDS 435
Query: 72 --------------------LKGSR--------------NILTWNTMIAGMMLNGRSEKA 97
L G N++TWN +I ++ NG +A
Sbjct: 436 TVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEA 495
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
E+F + G P+ +W +M++G Q G EA KMQ +G+ P+ +T LSA
Sbjct: 496 KEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSA 555
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMA--TALISMYMKCGQPSWARRFFDQFEIKPDD 215
A+L++L G+ HG+++R +L S++ T+L+ MY KCG + A R F ++ +
Sbjct: 556 SANLASLHFGRSIHGYIVR-NLQHSSSVSIETSLVDMYAKCGDINKAERVFGS-KLYSEL 613
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
P +NAMIS Y G + A+ ++ ++ KP++ +F ++LSAC H G +++A++IFT
Sbjct: 614 P-LYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSACNHVGDINQAIEIFT 672
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M G+KP EH+G MVDLL +G D A +LI E+P +P + SL+ +C S
Sbjct: 673 DMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEMPYKPDARMIQSLVASCNKQHKS 732
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E + L E EPEN +V +SN YA G W++V ++R M+ + LTK PG S
Sbjct: 733 ELVEYFSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMRDMMKAKGLTKNPGCS 788
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 55/383 (14%)
Query: 3 ECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
E L +E P++ +V AC +L + +FGR VHG +K + + ++L DMY KCG
Sbjct: 163 EMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCG 222
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF E+ RN++ WN +++
Sbjct: 223 VLDDARKVFDEIP-ERNVVAWN-----------------------------------ALL 246
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q GM EA +L M+ G+ PS V++ LSA A++ + GK++H I L
Sbjct: 247 VGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLE 306
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + T+L++ Y K G +A FD+ K D WN +ISGY + G E A+ +
Sbjct: 307 LDNILGTSLLNFYCKVGLIEYAEMIFDRMFDK--DVVTWNLLISGYVQQGLVEDAIYMCQ 364
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTM---MDDDFGLKPKQEHFGCMVD 295
LM+ E +K + + ++SA ++ K +Q + + ++ D L +D
Sbjct: 365 LMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLA------SITMD 418
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ + G + +A+++ E + ++++LL A + S L E EM+ E+ P
Sbjct: 419 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA---YAESGLSGEALRLFYEMQLESVPPN 475
Query: 356 VILSN-IYAGLGRWEDVGRIRQM 377
VI N I L R +V ++M
Sbjct: 476 VITWNLIILSLLRNGEVNEAKEM 498
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 145/308 (47%), Gaps = 39/308 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ VT + +SA A++ + G+Q H + + + D ++GT+L++ Y K G + A
Sbjct: 271 EPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEM 330
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++TWN +I+G + G E A+ + + + E K D T
Sbjct: 331 IFDRM-FDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVT------------ 377
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++++SA A LK GKE + IR L D +A+
Sbjct: 378 -----------------------LSTLMSAAARTKNLKFGKEVQCYCIRHSLESDIVLAS 414
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY KCG A++ FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 415 ITMDMYAKCGSIVDAKKVFDSTVEK--DLILWNTLLAAYAESGLSGEALRLFYEMQLESV 472
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++ ++ + G V++A ++F M G+ P + M++ + ++G +EA
Sbjct: 473 PPNVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEEAI 531
Query: 308 ELIRELPE 315
+R++ +
Sbjct: 532 LFLRKMQD 539
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 122/288 (42%), Gaps = 45/288 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + I T LV Y KC L A +F +L+
Sbjct: 76 ILQGCVYERDLCTGKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLR- 134
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W +I G K ++G+ A
Sbjct: 135 VRNVFSWAAII----------------------GVK-------------CRIGLCEGALM 159
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M + P V +V AC L + G+ HG+V++A L +A++L MY
Sbjct: 160 GFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYG 219
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG AR+ FD EI + WNA++ GY +NG E A+ + M+++ V+P+ +
Sbjct: 220 KCGVLDDARKVFD--EIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTV 277
Query: 255 VAVLSACGHAGHV-----DKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LSA + G V A+ I ++ D L +F C V L+
Sbjct: 278 STCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLI 325
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 119/249 (47%), Gaps = 15/249 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+ + +SA A+L L FGR +HG ++ ++ S I T+LVDMY KCG + A
Sbjct: 544 PNAFSITVALSASANLASLHFGRSIHGYIVRNLQHSSSVSIETSLVDMYAKCGDINKAER 603
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF K + +N MI+ L G ++A+ L+ L G KPD T+ S++S + +G
Sbjct: 604 VFGS-KLYSELPLYNAMISAYALYGNVKEAITLYRSLEDMGNKPDNITFTSLLSACNHVG 662
Query: 128 MRFEAFKLFEKMQST-GMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+A ++F M S G+ P L+ V + SA ALKL +E D
Sbjct: 663 DINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGETDRALKLIEEM-------PYKPD 715
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +L++ K + F E +P++ + + + Y G ++ V++ D+
Sbjct: 716 ARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMRDM 775
Query: 242 MQQEKVKPN 250
M+ + + N
Sbjct: 776 MKAKGLTKN 784
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 28/260 (10%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+ P ++ +S + G EA L KM + + +L C L
Sbjct: 29 QALNPSSTSYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCT 88
Query: 167 GKETHGHVIR-ADLNK-DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
GK+ H +++ D +E + T L+ Y KC A+ F + ++ + W A+I
Sbjct: 89 GKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVR--NVFSWAAIIG 146
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA----------GHVDKALQIF 274
R G E A+ F M + ++ P++ V ACG G+V KA
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKA---- 202
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
GL+ + D+ G+ G LD+AR++ E+PE V +++LL ++ +
Sbjct: 203 -------GLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVG---YVQN 252
Query: 335 DLGEEMAMKLQEMEPENPTP 354
+ EE L +M + P
Sbjct: 253 GMNEEAIRLLSDMRKDGVEP 272
>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Glycine max]
Length = 640
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/410 (33%), Positives = 215/410 (52%), Gaps = 30/410 (7%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF + A A+ +L+ G Q+H + + +GT L+ MY +CG A V
Sbjct: 101 PDSFTFAFALKAVANSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE-----------------------GLA 105
F E+ N++TWN ++ G E A ++F GLA
Sbjct: 161 FDEMS-EPNVVTWNAVLTAAFRCGDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLA 219
Query: 106 HEGFKP----DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
F D +W++MI GF+ G EAF F ++ + + +T VLSACA
Sbjct: 220 RRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQA 279
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
A + GK HG V +A S+ ALI Y KCG + AR F + + W +
Sbjct: 280 GAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVS-WTS 338
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+I+G +G E A+++F M++ V+P+ +F+++L AC H+G V++ +F+ M + +
Sbjct: 339 IIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLY 398
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEM 340
G++P EH+GCMVDL GR+ RL +A E I E+P P ++ +LLGAC H N ++ E +
Sbjct: 399 GIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELV 458
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L EM+P+N V+LSN+YA G+W+DV IR+ + + + K PG S
Sbjct: 459 KARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWS 508
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 208/376 (55%), Gaps = 38/376 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
S + AC +L +FGR VH +K+ +SD +G AL DMY K G + A NVF
Sbjct: 147 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 206
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN++++ +I G + + EK + +F
Sbjct: 207 RNVVSYTCLIDGYVETEQIEKGLSVFV--------------------------------- 233
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+++ G+ P+ +S++ ACA+ +AL+ G + H V++ + ++D +++ L+ MY K
Sbjct: 234 --ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 291
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A + FD EI WN+++S +G++G + A++IF+ M VKPN+ +F+
Sbjct: 292 CGLLEQAIQAFD--EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 349
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
++L+ C HAG V++ L F MD +G+ P +EH+ C++DLLGR+GRL EA+E I +P
Sbjct: 350 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 409
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
EP + S LGAC H + ++G+ A KL ++EP+N V+LSNIYA +WEDV +
Sbjct: 410 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 469
Query: 375 RQMINDRQLTKLPGIS 390
R + D + KLPG S
Sbjct: 470 RMRMRDGNVKKLPGYS 485
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF S+I ACA+ L+ G Q+H +KI D + + LVDMY KCG L A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ G + WN++++ +G + A+++FE + G KP+ T+ S+++G S G
Sbjct: 301 AFDEI-GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKE 169
+ E F M T G+VP + + V+ LK KE
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 402
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 38/303 (12%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
+W +MISG SQ EA + F M+ G VP+ +S + ACA L ++++GK+ H
Sbjct: 7 VSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCL 66
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
++ + + + + L MY KCG A + F++ K D W AMI GY + GE+E
Sbjct: 67 ALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCK--DEVSWTAMIDGYSKIGEFE 124
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACG-----------HAGHVDKALQ--IFT----- 275
A+ F M E+V + + L ACG H+ V + IF
Sbjct: 125 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 184
Query: 276 ----------MMDDDFGLKPKQEH---FGCMVDLLGRSGRLDEAR----ELIRELPEPTV 318
+ FG+ + + + C++D + ++++ EL R+ EP
Sbjct: 185 DMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNE 244
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEME-PENPTPFVILSNIYAGLGRWEDVGRIRQM 377
+ SL+ AC + G ++ ++ ++ E+P IL ++Y G E +
Sbjct: 245 FTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDE 304
Query: 378 IND 380
I D
Sbjct: 305 IGD 307
>gi|226493697|ref|NP_001147320.1| selenium-binding protein-like [Zea mays]
gi|195609890|gb|ACG26775.1| selenium-binding protein-like [Zea mays]
Length = 605
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 222/384 (57%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF ++ + L + Q+H L LK+ + T AL+ YL A
Sbjct: 98 RPDHFTFPQILPSAQPLHLVA---QLHALLLKLGFHAHTQSLNALLAAYLANARPDLASR 154
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ G+ ++++W TM+ G++ G + A LF+G+ +WN+M+SG+ +
Sbjct: 155 VFRGGGGALDVVSWTTMVGGLLKLGLFDDARVLFDGMPERNL----VSWNAMMSGYVKAC 210
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A ++F++M++ G+ ++ + + AC AL G+E H V ++ + DE +AT
Sbjct: 211 RFLDALEVFDEMRARGVDGNVFVAATAVVACTGAGALARGREVHRWVEQSGIQMDEKLAT 270
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A++ MY KCG A R F+ + WN MI G+ +G + A+++F M++E V
Sbjct: 271 AVVDMYCKCGCVEEAWRVFEALPLAAKGLTTWNCMIGGFAVHGRGQDALKLFGRMEREGV 330
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V VL+AC HAG + + F + +G++PK EH+GCMVDL GR+GRL+EA+
Sbjct: 331 APDDVTLVNVLTACAHAGMLSEGRHYFNYVPQRYGIEPKMEHYGCMVDLYGRAGRLEEAK 390
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++I+++P EP V V +L GA H + DLGE + ++ E++P+N +V+L+N+ A G
Sbjct: 391 KVIQDMPMEPDVGVLGALFGASKIHGDVDLGEAIGWRVIELDPQNSGRYVLLANLLATAG 450
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWEDV R+R+++++R ++K G S
Sbjct: 451 RWEDVARVRRLMDERNVSKEAGRS 474
>gi|147859488|emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
Length = 795
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 215/389 (55%), Gaps = 12/389 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +PN +F +VI + +L L GRQ+H +K+ +S+ +G+A+VD Y K +
Sbjct: 362 LNIKPNQFSFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 421
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F++ N++++ T+I G + R + A+ LF + +WN+MISG+S
Sbjct: 422 AQKAFEDTH-EPNVVSYTTLIRGYLKKERFDDALALFRXMPERNV----VSWNAMISGYS 476
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q+G EA LF M G +P+ + +SA A+++AL +G+ HG ++ D
Sbjct: 477 QMGYNEEAVNLFVVMLREGXLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVF 536
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +L+S Y KCG + F+ K + WNA+I GY +G A+ F+ MQ
Sbjct: 537 IGNSLVSFYAKCGSMEESLLVFNTLPKK--NIVSWNALICGYANHGRGMEAIYFFEKMQD 594
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFT--MMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++PNS + + +L AC H+G VDK F +++ L P EH CMVDLL RSGR
Sbjct: 595 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGR 652
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EA + + ELP P + + +LLG C H N +LGE A K+ ++PE+ + +V+LSN
Sbjct: 653 FKEAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNA 712
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ GRW+ V IR+ + ++++ +PG S
Sbjct: 713 HSAAGRWQSVSMIRKEMREKRMKGVPGSS 741
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 208/383 (54%), Gaps = 7/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T+ ++ A A L + G VH +K +SD I +L+ MY CG + AH V
Sbjct: 112 PDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKV 171
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++G +N+++WN+M+ G G A ++FE + D +W+S I G+ + G
Sbjct: 172 FESMQG-KNLVSWNSMLDGYAKCGEMAMAQKVFESMQER----DVRSWSSFIDGYVKAGE 226
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +FEKM++ G + + SVLSACA L AL+ G+ H ++I L + T+
Sbjct: 227 YREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTS 286
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A F D WNAMI G +G E ++++F MQ ++
Sbjct: 287 LVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIR 346
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ +++ +L+AC H G V +A F + G+ P EH+ CMVD+L R+G+L A +
Sbjct: 347 SDEITYLCLLAACAHGGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQ 405
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I ++P EPT S+ ++ C H N DL E + KL E++P N ++ LSN+YA + R
Sbjct: 406 FICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKR 465
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+D +R+ + R + K PG S
Sbjct: 466 WDDSKSMREAMERRGVKKSPGFS 488
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 144/369 (39%), Gaps = 76/369 (20%)
Query: 13 TFISVISACASLLYLQFGRQVH--GLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
T +S++ C S+L L +++H G++ + + + G + ++ VF
Sbjct: 16 TLLSLLDKCKSMLEL---KKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFS 72
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
++ S I +WN +I G + ++ +F + G PD T+
Sbjct: 73 QI-SSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTY-------------- 117
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
P L + A A LS K G H +I+ D + +LI
Sbjct: 118 ---------------PFL------VKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLI 156
Query: 191 SMYMKCGQPSWARRFFDQFE-----------------------------IKPDDPAFWNA 221
MY CG WA + F+ + ++ D W++
Sbjct: 157 HMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSS 216
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
I GY + GEY A+ +F+ M+ K N + V+VLSAC H G + K + + D+
Sbjct: 217 FIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNL 276
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIREL--PEPTVSVYHSLLGACWCHLNSDLGEE 339
L +VD+ + G ++EA + R + + V ++++++G H L EE
Sbjct: 277 -LPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATH---GLVEE 332
Query: 340 MAMKLQEME 348
+EM+
Sbjct: 333 SLKLFKEMQ 341
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 134/394 (34%), Positives = 205/394 (52%), Gaps = 32/394 (8%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
Y Q GR L E ++ TA++ Y + G + A +F E+ RN ++W M
Sbjct: 184 YCQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLF-EVMPDRNEVSWTAM 242
Query: 85 IAGMMLNGRSEKAMELFE---------------GLAHEGF------------KPDPATWN 117
+ G + G E A +LF G G D TW+
Sbjct: 243 LVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGTWS 302
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI + Q EA F +M G+ P+ S+L+ CA L+ G+E H ++R
Sbjct: 303 AMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRC 362
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ D +ALI+MY+KCG A+R F+ FE P D WN+MI+GY ++G E A+
Sbjct: 363 SFDTDVFAVSALITMYIKCGNLDKAKRVFNMFE--PKDVVMWNSMITGYAQHGLGEEALG 420
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
IFD ++ ++ P+ +++ VL+AC + G V + +IF M + ++ H+ CMVDLL
Sbjct: 421 IFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLL 480
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
GR+G +DEA +LI +P EP ++ +L+GAC H N+++ E A KL E+EP + P+V
Sbjct: 481 GRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYV 540
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LS+IY GRWED +R+ I+ R L K PG S
Sbjct: 541 LLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCS 574
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C PN +FIS+++ CA+L +GR++H L+ +D +AL+ MY+KCG L
Sbjct: 326 CRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLD 385
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF + ++++ WN+MI G +G E+A+ +F+ L PD T+ +++
Sbjct: 386 KAKRVFNMFE-PKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTAC 444
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
S G E ++F M GM S++ + S DL
Sbjct: 445 SYTGKVKEGREIFNSM---GMNSSIRLGAAHYSCMVDL 479
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 37/298 (12%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+ + L+ LP A + +++++ +++ G + +G A+ LF H+ +
Sbjct: 86 IAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLF----HQMPER 141
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
+ T+ ++ GF G EA KLF++M +V T++LS + G+ T
Sbjct: 142 NHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVAR----TAMLSGYC-----QAGRITE 192
Query: 172 GHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRN 229
+ ++ K ++ TA+IS Y + G+ AR+ FE+ PD + W AM+ GY +
Sbjct: 193 ARALFDEMPKRNVVSWTAMISGYAQNGKVILARKL---FEVMPDRNEVSWTAMLVGYIQA 249
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM---DDDFGLKPK 286
G E A ++F+ M V A+ A++ G G VD A +F M DD
Sbjct: 250 GHVEDAEDLFNAMPDHPV----AACNAMMVGFGQHGMVDAAKAMFERMCARDDG------ 299
Query: 287 QEHFGCMVDLLGRSGRLDEARELIREL----PEPTVSVYHSLLGACWCHLNSDLGEEM 340
+ M+ + ++ L EA RE+ P + + S+L C +D G E+
Sbjct: 300 --TWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGREL 355
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 43/228 (18%)
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A A I+ ++ G AR FD ++ A +NA+I+GY RN ++A+ +F M
Sbjct: 20 ANARIAWLVRAGNIEGARAAFDAMPLRT--TASYNALIAGYFRNHLPDAALGLFHRMPSR 77
Query: 246 K-----------------------------VKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+ P+ SF ++L G + A+++F
Sbjct: 78 DLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFHQ 137
Query: 277 MDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
M P++ H V L G +GR++EAR+L E+P+ V ++L +C
Sbjct: 138 M-------PERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSG-YCQAGR 189
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQ 382
+ E A+ EM N + + + YA G+ ++ +++ DR
Sbjct: 190 -ITEARAL-FDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRN 235
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 212/401 (52%), Gaps = 25/401 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ + + LQ GR++H +K S+ AL++MY CG + A
Sbjct: 111 KPDCYTYPFLFKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARG 170
Query: 68 VFQELKGSRNILTWNTMIAG-----------------MMLNGRSEKAMELFEGLAHEGFK 110
+F ++ +++TWN MI+G + G+ + A + F H+ +
Sbjct: 171 IF-DMSCKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYF----HKMPE 225
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D +W +MI G+ +L EA LF +MQ++ + P + SVL+ACA L AL+LG+
Sbjct: 226 RDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWI 285
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
++ + + D + ALI MY KCG A F+ + D W AM+ G NG
Sbjct: 286 RTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQR--DKFTWTAMVVGLAING 343
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
E A+ +F M + V P+ ++V VLSAC H G VD+ + F M G++P H+
Sbjct: 344 CGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHY 403
Query: 291 GCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP 349
GCMVDLLG++G L EA E+I+ +P +P V+ +LLGAC H ++++ E ++ E+EP
Sbjct: 404 GCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEP 463
Query: 350 ENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N +V+ NIYA +W+ + +RQ++ DR + K PG S
Sbjct: 464 NNGAVYVLQCNIYAACNKWDKLRELRQVMMDRGIKKTPGCS 504
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 110/269 (40%), Gaps = 59/269 (21%)
Query: 97 AMELFEGLAHEGFKPDPA--TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
A +LF+ + P+P+ +WN M G+S++ L+ +M + P +
Sbjct: 67 ARQLFDTI------PEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFL 120
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF----- 209
AL+LG+E H HV++ L+ + ALI+MY CG AR FD
Sbjct: 121 FKGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDV 180
Query: 210 -----------EIKPD------------------------------DPAFWNAMISGYGR 228
IK D D W AMI GY R
Sbjct: 181 VTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLR 240
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
Y+ A+ +F MQ K+KP+ + V+VL+AC G ++ I T +D + K K +
Sbjct: 241 LNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKN---KVKND 297
Query: 289 HF--GCMVDLLGRSGRLDEARELIRELPE 315
F ++D+ + G ++ A + LP+
Sbjct: 298 TFVGNALIDMYFKCGNVEMALSIFNTLPQ 326
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 206/390 (52%), Gaps = 41/390 (10%)
Query: 5 LSDEPNS-VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
S P S TF SVI ACA L L+ G+++H + SD + AL+ +Y K +
Sbjct: 182 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 241
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF + + T+IA WNS+ISG+
Sbjct: 242 VAKKVF-------DAMPQRTIIA-----------------------------WNSLISGY 265
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q G+ E+ LF M +G P + S+LS+C+ L AL G H + + +
Sbjct: 266 DQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNV 325
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ T+LI+MY +CG S AR FD +K + W AMISGYG +G A+E+F M+
Sbjct: 326 VLGTSLINMYTRCGNVSKAREVFD--SMKERNVVTWTAMISGYGMHGYGRQAMELFTEMR 383
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+PN+ +FVAVLSAC H+G +D ++F+ M + +GL P EH CMVD+ GR+G L
Sbjct: 384 AYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLL 443
Query: 304 DEARELIREL--PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
++A + I++ EP +V+ S+LGAC H N DLG ++A + +EPENP +V+LSNI
Sbjct: 444 NDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNI 503
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA GR + V +R M+ R+L K G S
Sbjct: 504 YALAGRMDRVEMVRNMMTRRRLKKQVGYST 533
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 18/347 (5%)
Query: 34 HGLTLKIEKQSDTMIGTALVDMYLKCGCLP--CAHNVFQELKGSRNILTWNTMIAGMMLN 91
H +T + QS + + AL+ + L AH + L SR++LT +I+ +
Sbjct: 79 HPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLT--KLISLVCTA 136
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G A LF + + PD ++S++ S+ G + + +M +G S
Sbjct: 137 GSITYARRLFPTVPN----PDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTF 192
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
TSV+ ACADLSAL+LGKE H HV+ D + ALI++Y K A++ FD
Sbjct: 193 TSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ 252
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WN++ISGY +NG + ++ +F LM + +P+SA+ V++LS+C G +D
Sbjct: 253 RT--IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGC 310
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ D + G ++++ R G + +ARE+ + E V + +++ H
Sbjct: 311 WLHDYADGN-GFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMH 369
Query: 332 LNSDLGEEMAMKLQEMEPENPTP----FVILSNIYAGLGRWEDVGRI 374
G + EM P P FV + + A G +D R+
Sbjct: 370 ---GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 413
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/384 (34%), Positives = 210/384 (54%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF S++ ACAS L+ GRQ+H L +K+ + + L++MY C + CA V
Sbjct: 119 PDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRV 178
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ ++P T+N+MI+G+++
Sbjct: 179 FDKI------------------------------------WEPCVVTYNAMITGYARGSR 202
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF ++Q+ + P+ + SVLS+CA L AL LGK H +V + N+ + TA
Sbjct: 203 PNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTA 262
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F+ ++ D W+AMI Y +G AV +F M++ +
Sbjct: 263 LIDMYAKCGSLDDAVCVFENMAVR--DTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTE 320
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ +L AC H G V++ + F M D +G+ P +H+GCMVDLLGR+GRL+EA E
Sbjct: 321 PDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYE 380
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I LP PT ++ +LL AC H N +LG+ + ++ E++ + ++ILSN+ A GR
Sbjct: 381 FIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGR 440
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WEDV +R+++N+R + K+PG S+
Sbjct: 441 WEDVNYVRKLMNERGVVKIPGCSS 464
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 39/297 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+ +S++ C SL L +Q+ +K SD + T +
Sbjct: 19 NTTHPLSLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFI---------------- 59
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
N + N M + A LF+ + +PD +N+M G+++
Sbjct: 60 -------NFCSLNPTTTSM------QHAHHLFDQIP----QPDIVLFNTMARGYARTDTP 102
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
AF LF ++ +G+ P S+L ACA AL+ G++ H I+ L+++ + L
Sbjct: 103 LRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTL 162
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I+MY C + ARR FD+ I +NAMI+GY R A+ +F +Q +KP
Sbjct: 163 INMYTACNEMDCARRVFDK--IWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKP 220
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ ++VLS+C G +D + + + G + ++D+ + G LD+A
Sbjct: 221 TDVTMLSVLSSCALLGALDLGKWMHEYVKKN-GFNRFVKVDTALIDMYAKCGSLDDA 276
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 12/245 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT +SV+S+CA L L G+ +H K + TAL+DMY KCG L A
Sbjct: 219 KPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVC 278
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + R+ W+ MI ++G KA+ LF+ + G +PD T+ ++ S G
Sbjct: 279 VFENM-AVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTG 337
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E F+ F M+ G++P +K C+ +L L +E + ++ +
Sbjct: 338 LVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRL------EEAYEFIVGLPIRPTP 391
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L+S G +R +Q FE+ + + + R G +E + LM
Sbjct: 392 ILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLM 451
Query: 243 QQEKV 247
+ V
Sbjct: 452 NERGV 456
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 15/225 (6%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALI---SMYMKCGQPSWARRFFDQF 209
S+L C L LK + I+ L+ D S+ T I S+ A FDQ
Sbjct: 25 SLLPKCTSLRELK---QLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQ- 80
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
I D +N M GY R A +F + + P+ +F ++L AC +++
Sbjct: 81 -IPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG--A 327
Q+ + GL ++++ +D AR + ++ EP V Y++++ A
Sbjct: 140 GRQLHCLA-IKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYA 198
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI----YAGLGRW 368
N L ++ + ++P + T +LS+ LG+W
Sbjct: 199 RGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKW 243
>gi|297741541|emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 215/389 (55%), Gaps = 12/389 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +PN +F +VI + +L L GRQ+H +K+ +S+ +G+A+VD Y K +
Sbjct: 386 LNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 445
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F++ N++++ T+I G + R + A+ LF + +WN+MISG+S
Sbjct: 446 AQKAFEDTH-EPNVVSYTTLIRGYLKKERFDDALALFRKMPERNV----VSWNAMISGYS 500
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q+G EA LF M G +P+ + +SA A+++AL +G+ HG ++ D
Sbjct: 501 QMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVF 560
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +L+S Y KCG + F+ K + WNA+I GY +G A+ F+ MQ
Sbjct: 561 IGNSLVSFYAKCGSMEESLLVFNTLPKK--NIVSWNALICGYANHGRGMEAIYFFEKMQD 618
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFT--MMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++PNS + + +L AC H+G VDK F +++ L P EH CMVDLL RSGR
Sbjct: 619 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGR 676
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EA + + ELP P + + +LLG C H N +LGE A K+ ++PE+ + +V+LSN
Sbjct: 677 FKEAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNA 736
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ GRW+ V IR+ + ++++ +PG S
Sbjct: 737 HSAAGRWQSVSMIRKEMREKRMKGVPGSS 765
>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Glycine max]
Length = 693
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 197/365 (53%), Gaps = 39/365 (10%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ G+++HG ++ E D ++ +AL+D+Y KCG L A +F ++K R++++W T
Sbjct: 236 LRLGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMK-DRDVVSWTT--- 291
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
MI + G R E F LF + +G+ P
Sbjct: 292 --------------------------------MIHRCFEDGRREEGFLLFRDLMQSGVRP 319
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ VL+ACAD +A LGKE HG+++ A + +AL+ MY KCG ARR F
Sbjct: 320 NEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVF 379
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+ E+ D W ++I GY +NG+ + A+ F+L+ Q KP+ ++V VLSAC HAG
Sbjct: 380 N--EMHQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGL 437
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLL 325
VDK L+ F + + GL +H+ C++DLL RSGR EA +I +P +P ++ SLL
Sbjct: 438 VDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLL 497
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
G C H N +L + A L E+EPENP ++ L+NIYA G W +V +R+ +++ + K
Sbjct: 498 GGCRIHGNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVK 557
Query: 386 LPGIS 390
PG S
Sbjct: 558 KPGKS 562
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 164/320 (51%), Gaps = 13/320 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ + ++I+AC L+ GR+VH T I L+DMY KCG L A +
Sbjct: 85 PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ G R++ +WNTMI G GR E+A +LF+ + + D +WN+ ISG+
Sbjct: 145 FDEM-GHRDLCSWNTMIVGYAKLGRLEQARKLFDEMP----QRDNFSWNAAISGYVTHNQ 199
Query: 129 RFEAFKLFEKMQSTGMVPSLK-CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF MQ S K ++S L+A A + L+LGKE HG++IR +LN DE + +
Sbjct: 200 PREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWS 259
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG AR FDQ +K D W MI +G E +F + Q V
Sbjct: 260 ALLDLYGKCGSLDEARGIFDQ--MKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGV 317
Query: 248 KPNSASFVAVLSACG-HAG-HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +F VL+AC HA H+ K + + M G P +V + + G
Sbjct: 318 RPNEYTFAGVLNACADHAAEHLGKEVHGYMMHA---GYDPGSFAISALVHMYSKCGNTRV 374
Query: 306 ARELIRELPEPTVSVYHSLL 325
AR + E+ +P + + SL+
Sbjct: 375 ARRVFNEMHQPDLVSWTSLI 394
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 39/272 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V++ACA G++VHG + + +ALV MY KCG A V
Sbjct: 319 PNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRV 378
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ ++++W ++I G NG+ ++A+ FE L G KPD T+ ++S + G+
Sbjct: 379 FNEMHQP-DLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGL 437
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ + F + KE HG + AD
Sbjct: 438 VDKGLEYFHSI----------------------------KEKHGLMHTAD------HYAC 463
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I + + G+ A D +KP D W +++ G +G E A + + ++
Sbjct: 464 VIDLLARSGRFKEAENIIDNMPVKP-DKFLWASLLGGCRIHGNLELAKRAAKALYE--IE 520
Query: 249 P-NSASFVAVLSACGHAGHVDKALQIFTMMDD 279
P N A+++ + + +AG + + MD+
Sbjct: 521 PENPATYITLANIYANAGLWSEVANVRKDMDN 552
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 41/228 (17%)
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
E + T PS + +++++AC AL+LG+ H H ++ ++ L+ MY KC
Sbjct: 76 ELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKC 135
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A+ FD E+ D WN MI GY + G E A ++FD M Q ++ S+ A
Sbjct: 136 GSLVDAQMLFD--EMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQR----DNFSWNA 189
Query: 257 VLSACGHAGHVDKALQIFTMMD-------DDFG-------------LKPKQEHFGCMV-- 294
+S +AL++F +M + F L+ +E G ++
Sbjct: 190 AISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRT 249
Query: 295 -------------DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
DL G+ G LDEAR + ++ + V + +++ C+
Sbjct: 250 ELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCF 297
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 8 EPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+P+ VT++ V+SAC L Y ++ HGL + + ++D+ + G
Sbjct: 419 KPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYA------CVIDLLARSG 472
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
A N+ + + W +++ G ++G E A + L +E +PAT+ ++
Sbjct: 473 RFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKAL-YEIEPENPATYITLA 531
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMV 145
+ ++ G+ E + + M + G+V
Sbjct: 532 NIYANAGLWSEVANVRKDMDNMGIV 556
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 204/365 (55%), Gaps = 40/365 (10%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ G+ H ++K ++ + AL+ MY +CG A +F +K
Sbjct: 436 LRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK------------- 482
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
D TW+++IS +S LG +A L+++M + G+ P
Sbjct: 483 -----------------------TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ + SV+S+CA+L+AL+ G+ H HV L D S+ TAL+ MYMKCGQ AR+ F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D + D WN MISGYG +GE A+++F +M++ VKPNS +F+A+LSAC HAG
Sbjct: 580 DSMLER--DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGL 637
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLL 325
VDK ++FT M +++ L+P +H+ CMVDLLG+SG L EA +++ +P EP ++ +LL
Sbjct: 638 VDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
GAC H N ++G +A K +PEN ++++SN Y +W ++ ++R M+ + + K
Sbjct: 697 GACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEK 756
Query: 386 LPGIS 390
G S
Sbjct: 757 SIGWS 761
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V +++ + ++ G+ H ++ +IG AL+ MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ML+ R D +W+SM+ + + G
Sbjct: 373 VFR------------------MLHQR------------------DTDSWSSMVVAYCKAG 396
Query: 128 MRFEAFKLFEKMQ---STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + +L+ +MQ + S++S+C+ L L+LG+ H + I+ ++ S
Sbjct: 397 LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSS 456
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A ALISMY +CG AR+ F +K D W+A+IS Y G + A+ ++D M
Sbjct: 457 VANALISMYGRCGNFDVARKIFGM--VKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E VKPNSA+ V+V+S+C + ++ I + + D GL+ +VD+ + G+L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHV-KDVGLECDLSICTALVDMYMKCGQLG 573
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEM------EPENPTPFVI 357
AR++ + E V ++ ++ H GE + A+KL M +P + T I
Sbjct: 574 IARKMFDSMLERDVVTWNVMISGYGMH-----GEAIQALKLFSMMERGNVKPNSLTFLAI 628
Query: 358 LSN-IYAGL 365
LS +AGL
Sbjct: 629 LSACCHAGL 637
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 35/259 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T +SVIS+CA+L L+ G +H + + D I TALVDMY+KCG L A
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARK 577
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI+G ++G + +A++LF + KP+ T+ +++S G
Sbjct: 578 MFDSML-ERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + +LF +M+ + P+LK ++ DL LGK H L + E + +
Sbjct: 637 LVDKGRELFTRMEEYSLEPNLKHYACMV----DL----LGKSGH-------LQEAEDVVS 681
Query: 188 ALISMYMKCGQPSW-----ARRFFDQFEI-----------KPDDPAFWNAMISGYGRNGE 231
A M ++ W A + D FE+ P++ ++ M + YG +
Sbjct: 682 A---MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEK 738
Query: 232 YESAVEIFDLMQQEKVKPN 250
+ ++ D+M+ V+ +
Sbjct: 739 WNEIEKLRDMMKNHGVEKS 757
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
P+ T V SA A L L G VH +++ +E + ++LV MY +CG +
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ R+++ W +I+G + NG + EGL++
Sbjct: 164 AVRLFDEMP-ERDVVAWTAVISGCVCNG------QCGEGLSY------------------ 198
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
++ G P+ + + S L AC L L +G HG ++A + S
Sbjct: 199 -------LVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++L SMY KC AR F E+ D W ++I Y R G E AVE+F M++
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFP--ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 245 EKVKPNSASFVAVLSACGHAGHV 267
++P+ +L+ G+ V
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKV 332
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD WNS++ + +M+++G PS V SA A+L AL +G
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 171 HGHVIRADLNKDE---SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
H + +R L + + ++A++L+ MY +CG A R FD E+ D W A+ISG
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFD--EMPERDVVAWTAVISGCV 187
Query: 228 RNGEYESAVEIFDLMQQEK----VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
NG+ + M + +PNS + + L ACG G L + T + FG+
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE----LSVGTCL-HGFGV 242
Query: 284 KPKQEHFGCMVDLL----GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL-NSDLGE 338
K H +V L + ++AR L ELPE + + SL+GA +C +++
Sbjct: 243 KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGA-YCRAGHAEKAV 301
Query: 339 EMAMKLQE--MEPENPTPFVILSNIYAGLG 366
E+ + ++E ++P+ V++S + AGLG
Sbjct: 302 ELFLGMEESGLQPDE----VVISCLLAGLG 327
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 38/236 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T S + AC L L G +HG +K + ++L MY KC A
Sbjct: 212 RPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARI 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL +++++W ++I G +EKA+ELF G+ G +PD + +++G
Sbjct: 272 LFPELP-EKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGL---- 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + ++ GK H ++R + +
Sbjct: 327 -------------------------------GNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
ALISMY KC Q A F + D W++M+ Y + G +E++ MQ
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDS--WSSMVVAYCKAGLDLKCLELYREMQ 409
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 208/376 (55%), Gaps = 38/376 (10%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
S + AC +L +FGR VH +K+ +SD +G AL DMY K G + A NVF
Sbjct: 212 STLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSEC 271
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN++++ +I G + + EK + +F
Sbjct: 272 RNVVSYTCLIDGYVETEQIEKGLSVFV--------------------------------- 298
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+++ G+ P+ +S++ ACA+ +AL+ G + H V++ + ++D +++ L+ MY K
Sbjct: 299 --ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A + FD EI WN+++S +G++G + A++IF+ M VKPN+ +F+
Sbjct: 357 CGLLEQAIQAFD--EIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 414
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
++L+ C HAG V++ L F MD +G+ P +EH+ C++DLLGR+GRL EA+E I +P
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
EP + S LGAC H + ++G+ A KL ++EP+N V+LSNIYA +WEDV +
Sbjct: 475 EPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSV 534
Query: 375 RQMINDRQLTKLPGIS 390
R + D + KLPG S
Sbjct: 535 RMRMRDGNVKKLPGYS 550
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 163/400 (40%), Gaps = 74/400 (18%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
VI A L+ G+Q+H L + T + LV+MY KCG L
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGEL-------------- 56
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+ A++LF+ + +W +MISG SQ EA + F
Sbjct: 57 ------------------DHALKLFDTMPQRNL----VSWTAMISGLSQNSKFSEAIRTF 94
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M+ G VP+ +S + ACA L ++++GK+ H ++ + + + + L MY KC
Sbjct: 95 CGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKC 154
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A + F++ K D W AMI GY + GE+E A+ F M E+V + +
Sbjct: 155 GAMFDACKVFEEMPCK--DEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCS 212
Query: 257 VLSACG-----------HAGHVDKALQ--IFT---------------MMDDDFGLKPKQE 288
L ACG H+ V + IF + FG+ +
Sbjct: 213 TLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECR 272
Query: 289 H---FGCMVDLLGRSGRLDEAR----ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ + C++D + ++++ EL R+ EP + SL+ AC + G ++
Sbjct: 273 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 332
Query: 342 MKLQEME-PENPTPFVILSNIYAGLGRWEDVGRIRQMIND 380
++ ++ E+P IL ++Y G E + I D
Sbjct: 333 AQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGD 372
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF S+I ACA+ L+ G Q+H +KI D + + LVDMY KCG L A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ G + WN++++ +G + A+++FE + G KP+ T+ S+++G S G
Sbjct: 366 AFDEI-GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 424
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKE 169
+ E F M T G+VP + + V+ LK KE
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKE 467
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 3/171 (1%)
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
M+ + V+ A L+ GK+ H +I A + L++MY KCG+ A
Sbjct: 1 MLRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHAL 60
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
+ FD + + W AMISG +N ++ A+ F M+ P +F + + AC
Sbjct: 61 KLFDTMPQR--NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACAS 118
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
G ++ Q+ + FG+ + + D+ + G + +A ++ E+P
Sbjct: 119 LGSIEMGKQMHCLA-LKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMP 168
>gi|449454143|ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
gi|449490933|ref|XP_004158752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09190-like [Cucumis sativus]
Length = 484
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 217/385 (56%), Gaps = 9/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF ++ +CA+L G+ V + I +V++Y+ C + A +
Sbjct: 105 PDQYTFAPLLKSCANLCEYSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKM 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+++ WN MI G G + + LF ++ +WN++IS +Q
Sbjct: 165 FDEM-SHRDVVVWNLMIRGFCKTGNVDFGLCLFRQMSERSL----VSWNTIISCLAQNRR 219
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI-RADLNKDESMAT 187
EA +LF++M+ G P V ++L C+ L AL++G+ H + + +L ++
Sbjct: 220 DVEALELFQQMEEHGFKPDEVTVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGN 279
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI Y KCG A F + K WN +I G+ NG+ E A+++F M++E +
Sbjct: 280 SLIDFYCKCGNIEKAYNIFQKMTCK--SVVSWNTIILGFALNGKGEFAIDLFMEMRKEYL 337
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN A+FVAVL+AC H+G ++K ++F+ M +D+ ++PK EHFGCMVDLLGR G ++EA
Sbjct: 338 KPNDATFVAVLTACVHSGLLEKGRELFSSMAEDYEIQPKLEHFGCMVDLLGRGGCVEEAH 397
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P +P +++ ++LGAC H N L E +L +EP N +V+LSN+ A G
Sbjct: 398 KLIKSMPMQPNATLWGAVLGACRTHGNLKLAEMAVKELISLEPWNSGNYVLLSNMLAEEG 457
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RWE+V +RQ + ++ + K PG SA
Sbjct: 458 RWEEVENVRQWMREKSVKKAPGQSA 482
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/296 (18%), Positives = 122/296 (41%), Gaps = 36/296 (12%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
L + P+ +NS+I S ++ LF M++ +VP +L +CA+L
Sbjct: 63 LFSQSHNPNIFLFNSIIKAHSLSVPFHQSLLLFSSMKNHRIVPDQYTFAPLLKSCANLCE 122
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
LG+ V R S+ ++ +Y+ C + A + FD E+ D WN MI
Sbjct: 123 YSLGQCVISEVFRRGFYCFGSIRIGVVELYVCCEKMEDAWKMFD--EMSHRDVVVWNLMI 180
Query: 224 SGYGRNGEYE-------------------------------SAVEIFDLMQQEKVKPNSA 252
G+ + G + A+E+F M++ KP+
Sbjct: 181 RGFCKTGNVDFGLCLFRQMSERSLVSWNTIISCLAQNRRDVEALELFQQMEEHGFKPDEV 240
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V +L C G ++ +I + L ++D + G +++A + ++
Sbjct: 241 TVVTMLPVCSRLGALEVGQRIHSYASSKGNLVGITTVGNSLIDFYCKCGNIEKAYNIFQK 300
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILSN-IYAGL 365
+ +V +++++ + + ++ M++++ ++P + T +L+ +++GL
Sbjct: 301 MTCKSVVSWNTIILGFALNGKGEFAIDLFMEMRKEYLKPNDATFVAVLTACVHSGL 356
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 213/388 (54%), Gaps = 10/388 (2%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
CL +P++ T+ V+ AC++ L G+QVH +K +T I ++L+ MY G +
Sbjct: 82 CL--KPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIV 139
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A V +E N L N+MI+G + G +KA +F+ + D A+W+++I+G
Sbjct: 140 EAECVLREFS-EENTLAKNSMISGYLSKGHVDKARAMFDQMK----AKDVASWSAIITGC 194
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
++ GM EA LFE M + +P+ + S+LSACA L AL G+ H ++ R +
Sbjct: 195 TKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSI 254
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++TALI MY KCG +FF + + D W A+ISG+ G+ + E+F+ M
Sbjct: 255 RLSTALIDMYAKCGDIQSGYKFFRKMPRR--DIVTWGAIISGFAIYGQAKKCFELFEEML 312
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ + PN FVA+LSAC HAG+V++ F M D G++P EH+GCMVDLLGR+GRL
Sbjct: 313 ADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRL 372
Query: 304 DEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E I +PE P ++ S+L AC H + + G L E+EP + + + ++
Sbjct: 373 KEAEEFIISMPEKPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMF 432
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
G ++ +IR+MI D+ + G S
Sbjct: 433 GNAGEKQEATKIRKMIEDQGMETTSGSS 460
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 46 TMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA 105
++ G L++ Y+ + A ++F+ + ++ +NTMI G+ML R ++ LF L
Sbjct: 21 SLCGRRLLESYVTMSEISYARSIFERIP-YLDVFVYNTMIRGLMLGKRPYDSLLLFNELL 79
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
KPD T+ ++ S E ++ ++ G+ P+ +S++ ++
Sbjct: 80 LGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSI- 138
Query: 166 LGKETHGHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+ + +++ ++A ++IS Y+ G AR FDQ +K D A W+A+I+
Sbjct: 139 ----VEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQ--MKAKDVASWSAIIT 192
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +NG + A+ +F+ M PN ++ V++LSAC H G + + I + D G
Sbjct: 193 GCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYI-DRIGAD 251
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ + G + + R++P + + +++
Sbjct: 252 MSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAII 292
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/384 (32%), Positives = 210/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T +S++ LL L+ GR++HG +K + IG A++DMY KCG
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG-------- 490
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R A E+FE L+ K D +WNSMI+ +Q
Sbjct: 491 ------------------------RMNLAYEIFERLS----KRDIVSWNSMITRCAQSDN 522
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F +M +G+ +++ LSACA+L + GK HG +I+ L D +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKV 247
LI MY KCG A F +K + WN++I+ G +G+ + ++ +F +++++ +
Sbjct: 583 LIDMYAKCGNLKAAMNVFKT--MKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ ++S+C H G VD+ ++ F M +D+G++P+QEH+ C+VDL GR+GRL EA
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E ++ +P P V+ +LLGAC H N +L E + KL +++P N +V++SN +A
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WE V ++R ++ +R++ K+PG S
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYS 784
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 155/323 (47%), Gaps = 45/323 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN+VTF V+S CAS L + G Q+HGL + + I +L+ MY KCG
Sbjct: 237 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG-------- 288
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
R + A +LF ++ + D TWN MISG+ Q G+
Sbjct: 289 ------------------------RFDDASKLFRMMS----RADTVTWNCMISGYVQSGL 320
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E+ F +M S+G++P +S+L + + L+ K+ H +++R ++ D + +A
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI Y KC S A+ F Q D + AMISGY NG Y ++E+F + + K+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQ--CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKIS 438
Query: 249 PNSASFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLDE 305
PN + V++L G A + + L F ++ F + + GC ++D+ + GR++
Sbjct: 439 PNEITLVSILPVIGILLALKLGRELHGF-IIKKGFD---NRCNIGCAVIDMYAKCGRMNL 494
Query: 306 ARELIRELPEPTVSVYHSLLGAC 328
A E+ L + + ++S++ C
Sbjct: 495 AYEIFERLSKRDIVSWNSMITRC 517
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 154/363 (42%), Gaps = 43/363 (11%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ AC++ L+ G+QVH + D+ ++ MY CG +F L R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 77 -NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
+I WN++I+ + NG +A+ + + G PD +T+ ++
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLV--------------- 145
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
AC L K V ++ +E +A++LI Y++
Sbjct: 146 --------------------KACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLE 185
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
G+ + FD+ + D WN M++GY + G +S ++ F +M+ +++ PN+ +F
Sbjct: 186 YGKIDVPSKLFDR--VLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFD 243
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
VLS C +D +Q+ ++ G+ + ++ + + GR D+A +L R +
Sbjct: 244 CVLSVCASKLLIDLGVQLHGLVVVS-GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIYAGLGRWEDVGRI 374
++ ++ ++ S L EE EM P I S++ + ++E++
Sbjct: 303 ADTVTWNCMISG---YVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYC 359
Query: 375 RQM 377
+Q+
Sbjct: 360 KQI 362
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 204/365 (55%), Gaps = 40/365 (10%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L+ G+ H ++K ++ + AL+ MY +CG A +F +K
Sbjct: 436 LRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVK------------- 482
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
D TW+++IS +S LG +A L+++M + G+ P
Sbjct: 483 -----------------------TKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKP 519
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+ + SV+S+CA+L+AL+ G+ H HV L D S+ TAL+ MYMKCGQ AR+ F
Sbjct: 520 NSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMF 579
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
D + D WN MISGYG +GE A+++F +M++ VKPNS +F+A+LSAC HAG
Sbjct: 580 DS--MLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGL 637
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLL 325
VDK ++FT M +++ L+P +H+ CMVDLLG+SG L EA +++ +P EP ++ +LL
Sbjct: 638 VDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
GAC H N ++G +A K +PEN ++++SN Y +W ++ ++R M+ + + K
Sbjct: 697 GACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEK 756
Query: 386 LPGIS 390
G S
Sbjct: 757 SIGWS 761
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 170/369 (46%), Gaps = 55/369 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V +++ + ++ G+ H ++ +IG AL+ MY KC + A
Sbjct: 313 QPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAAT 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ML+ R D +W+SM+ + + G
Sbjct: 373 VFR------------------MLHQR------------------DTDSWSSMVVAYCKAG 396
Query: 128 MRFEAFKLFEKMQ---STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + +L+ +MQ + S++S+C+ L L+LG+ H + I+ ++ S
Sbjct: 397 LDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSS 456
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+A ALISMY +CG AR+ F +K D W+A+IS Y G + A+ ++D M
Sbjct: 457 VANALISMYGRCGNFDVARKIFGM--VKTKDVVTWSALISSYSHLGHSKDALLLYDQMLT 514
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
E VKPNSA+ V+V+S+C + ++ I + + D GL+ +VD+ + G+L
Sbjct: 515 EGVKPNSATLVSVISSCANLAALEHGELIHSHV-KDVGLECDLSICTALVDMYMKCGQLG 573
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEM------EPENPTPFVI 357
AR++ + E V ++ ++ H GE + A+KL M +P + T I
Sbjct: 574 IARKMFDSMLERDVVTWNVMISGYGMH-----GEAIQALKLFSMMERGNVKPNSLTFLAI 628
Query: 358 LSN-IYAGL 365
LS +AGL
Sbjct: 629 LSACCHAGL 637
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 129/259 (49%), Gaps = 35/259 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T +SVIS+CA+L L+ G +H + + D I TALVDMY+KCG L A
Sbjct: 518 KPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARK 577
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+++TWN MI+G ++G + +A++LF + KP+ T+ +++S G
Sbjct: 578 MFDSML-ERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAG 636
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + +LF +M+ + P+LK ++ DL LGK H L + E + +
Sbjct: 637 LVDKGRELFTRMEEYSLEPNLKHYACMV----DL----LGKSGH-------LQEAEDVVS 681
Query: 188 ALISMYMKCGQPSW-----ARRFFDQFEI-----------KPDDPAFWNAMISGYGRNGE 231
A M ++ W A + D FE+ P++ ++ M + YG +
Sbjct: 682 A---MPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEK 738
Query: 232 YESAVEIFDLMQQEKVKPN 250
+ ++ D+M+ V+ +
Sbjct: 739 WNEIEKLRDMMKNHGVEKS 757
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 37/263 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
P+ T V SA A L L G VH +++ +E + ++LV MY +CG +
Sbjct: 104 RPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRD 163
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ R+++ W +I+G + NG + EGL++
Sbjct: 164 AVRLFDEMP-ERDVVAWTAVISGCVCNG------QCGEGLSY------------------ 198
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
++ G P+ + + S L AC L L +G HG ++A + S
Sbjct: 199 -------LVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPS 251
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++L SMY KC AR F E+ D W ++I Y R G E AVE+F M++
Sbjct: 252 VVSSLFSMYTKCDSTEDARILFP--ELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEE 309
Query: 245 EKVKPNSASFVAVLSACGHAGHV 267
++P+ +L+ G+ V
Sbjct: 310 SGLQPDEVVISCLLAGLGNDAKV 332
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 24/269 (8%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD WNS++ + +M+++G PS V SA A+L AL +G
Sbjct: 70 PDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAV 129
Query: 171 HGHVIRADLNKDE---SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
H + +R L + + ++A++L+ MY +CG A R FD E+ D W A+ISG
Sbjct: 130 HAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFD--EMPERDVVAWTAVISGCV 187
Query: 228 RNGEYESAVEIFDLMQQEK----VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
NG+ + M + +PNS + + L ACG G L + T + FG+
Sbjct: 188 CNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGE----LSVGTCL-HGFGV 242
Query: 284 KPKQEHFGCMVDLL----GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
K H +V L + ++AR L ELPE + + SL+GA +++ E
Sbjct: 243 KAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVE 302
Query: 340 MAMKLQE--MEPENPTPFVILSNIYAGLG 366
+ + ++E ++P+ V++S + AGLG
Sbjct: 303 LFLGMEESGLQPDE----VVISCLLAGLG 327
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 38/236 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T S + AC L L G +HG +K + ++L MY KC A
Sbjct: 212 RPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARI 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL +++++W ++I G +EKA+ELF G+ G +PD + +++G
Sbjct: 272 LFPELP-EKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGL---- 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + ++ GK H ++R + +
Sbjct: 327 -------------------------------GNDAKVRGGKTFHAAIVRRNFGDSVLIGN 355
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
ALISMY KC Q A F + D W++M+ Y + G +E++ MQ
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDS--WSSMVVAYCKAGLDLKCLELYREMQ 409
>gi|347954452|gb|AEP33726.1| chlororespiratory reduction 21, partial [Aethionema cordifolium]
Length = 618
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 222/415 (53%), Gaps = 38/415 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF-- 69
VT +++SA A L G+Q+ L+ +SD + + VDMY KCG + A VF
Sbjct: 161 VTISTLMSAAAHTQDLNLGKQLQCYCLRNSLESDIVSASTTVDMYAKCGRILDAKKVFDS 220
Query: 70 --------------------------------QELKGSRNILTWNTMIAGMMLNGRSEKA 97
Q + N+++WN +I ++ G+ +A
Sbjct: 221 TVHKDLMLWNTLLAAYAESSHSGEALRLFYEMQLESVTPNVISWNLIILSLLRXGQVTEA 280
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+F + G P+ +W ++++G Q G EA F+KMQ +G+ P+ T LSA
Sbjct: 281 KXMFLQIQSTGISPNLISWTTLMNGLVQNGYSEEAIMYFKKMQESGLRPNPFSXTVALSA 340
Query: 158 CADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
C++L++L G+ HG++IR + S+ T+L+ MY KCG + A R F ++ + P
Sbjct: 341 CSNLASLHFGRSIHGYIIRNQWHSGSVSLETSLLDMYAKCGDINKAERVFGN-KLYSELP 399
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+NAMIS YG G+ E A+ ++ ++ +KP++ +F +LSAC H G V++A+QIFT
Sbjct: 400 -LYNAMISAYGLYGKVEEAITLYRDLEALDIKPDNITFTNLLSACNHTGSVNQAIQIFTD 458
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSD 335
M G++P EH+G MVDL SG ++EA +++++P EP + SLL C ++
Sbjct: 459 MVSKHGMQPCLEHYGLMVDLFASSGEIEEALRIVKDMPYEPDARMIQSLLAYCKKEHKTE 518
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L + ++ L E EP+N +V +SN YA G WE+V ++R+M+ ++ L K PG S
Sbjct: 519 LVDYLSKYLLESEPDNSGNYVTISNAYAAGGNWEEVMKMREMMKEKGLKKKPGCS 573
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 141/308 (45%), Gaps = 39/308 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A + ++ G+Q H + + + D ++GT++++ Y K G + CA
Sbjct: 56 EPTRVTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIECAEM 115
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ ++++TWN +I+G + G E A+ + + E K D T
Sbjct: 116 IFDKMI-EKDVVTWNLLISGYVQQGLIEDAIYKCKLMRLENLKFDCVT------------ 162
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++++SA A L LGK+ + +R L D A+
Sbjct: 163 -----------------------ISTLMSAAAHTQDLNLGKQLQCYCLRNSLESDIVSAS 199
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY KCG+ A++ FD K D WN +++ Y + A+ +F MQ E V
Sbjct: 200 TTVDMYAKCGRILDAKKVFDSTVHK--DLMLWNTLLAAYAESSHSGEALRLFYEMQLESV 257
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S+ ++ + G V +A +F + G+ P + +++ L ++G +EA
Sbjct: 258 TPNVISWNLIILSLLRXGQVTEAKXMFLQIQST-GISPNLISWTTLMNGLVQNGYSEEAI 316
Query: 308 ELIRELPE 315
+++ E
Sbjct: 317 MYFKKMQE 324
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 137/310 (44%), Gaps = 46/310 (14%)
Query: 54 DMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
DMY KCG L A VF + RN++ WN
Sbjct: 1 DMYGKCGILDDARKVFDRMP-ERNVVAWN------------------------------- 28
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
S++ G+ Q GM EA +L M + G+ P+ V++ LSA A + ++ GK++H
Sbjct: 29 ----SLMVGYVQNGMNEEAIRLLSDMMNEGIEPTRVTVSTCLSASAHMGGIEEGKQSHAI 84
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
I L D + T++++ Y K G A FD+ K D WN +ISGY + G E
Sbjct: 85 AIVNGLELDNILGTSILNFYCKVGLIECAEMIFDKMIEK--DVVTWNLLISGYVQQGLIE 142
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFG 291
A+ LM+ E +K + + ++SA H ++ K LQ + + + L+
Sbjct: 143 DAIYKCKLMRLENLKFDCVTISTLMSAAAHTQDLNLGKQLQCYCLRN---SLESDIVSAS 199
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
VD+ + GR+ +A+++ + ++++LL A + S E EM+ E+
Sbjct: 200 TTVDMYAKCGRILDAKKVFDSTVHKDLMLWNTLLAA---YAESSHSGEALRLFYEMQLES 256
Query: 352 PTPFVILSNI 361
TP VI N+
Sbjct: 257 VTPNVISWNL 266
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 17/192 (8%)
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG AR+ FD+ + + WN+++ GY +NG E A+ + M E ++P
Sbjct: 2 MYGKCGILDDARKVFDR--MPERNVVAWNSLMVGYVQNGMNEEAIRLLSDMMNEGIEPTR 59
Query: 252 ASFVAVLSACGHAGHVDK-----ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ LSA H G +++ A+ I ++ D L +F C V G ++ A
Sbjct: 60 VTVSTCLSASAHMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKV------GLIECA 113
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGL 365
+ ++ E V ++ L+ ++ L E+ K + M EN V +S + +
Sbjct: 114 EMIFDKMIEKDVVTWNLLISG---YVQQGLIEDAIYKCKLMRLENLKFDCVTISTLMSAA 170
Query: 366 GRWEDVGRIRQM 377
+D+ +Q+
Sbjct: 171 AHTQDLNLGKQL 182
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 202/347 (58%), Gaps = 8/347 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
DT+ ++ Y++ G L A +FQ + +++ ++WNTMIAG G+ KA+ +F +
Sbjct: 359 DTVCWNTMISGYVQRGMLEEAMLLFQRMP-NKDTVSWNTMIAGYAQGGQMRKAIGIFRRM 417
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ + + +WNS+ISGF Q G+ +AF F M+ S L ACA+L+AL
Sbjct: 418 S----RKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAAL 473
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+G++ H ++R+ D ALIS Y KCG+ A++ FD E+ D WNA++
Sbjct: 474 HVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFD--EMVGKDIVSWNALVD 531
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY NG+ A+ +F M+ V+P+ +FV +LSAC AG +D+ L F M +++ LK
Sbjct: 532 GYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLK 591
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+ CM DLLGR+G+L+EA EL++ + +P V+ +LLGAC + N +L A K
Sbjct: 592 PVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEK 651
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L E+EP + +V+LSNI A G+W++ + R I ++ K PG++
Sbjct: 652 LSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPGLA 698
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 139/321 (43%), Gaps = 65/321 (20%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G L A +F + RN +T+N+M++ + +GR ++A LF+G+ + +WN
Sbjct: 30 RSGQLAAARRLFDSMP-RRNTVTYNSMLSALARHGRIDEARALFDGMPSR----NAVSWN 84
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+MI+ S G +A LF++M S
Sbjct: 85 AMIAALSDHGRVADARGLFDRMPS------------------------------------ 108
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP--AFWNAMISGYGRNGEYESA 235
+D+ T ++S Y + G+ AR D+ P D A +NAMISGY +NG ++ A
Sbjct: 109 ---RDDFSWTVMVSCYARAGELELARDVLDRM---PGDKCTACYNAMISGYAKNGRFDDA 162
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
V++ +E P+ S+ + L+ +G + +A+Q F M ++ + M++
Sbjct: 163 VKLL----REMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEM-----VEKDMVSWNLMLE 213
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL-GACWCHLNSDLGEEMAMKLQEMEPE-NPT 353
R+G LD A + P V + +LL G C SD A L + PE N
Sbjct: 214 GFVRAGDLDAAASFFGRIESPNVVSWVTLLNGYCRAGRISD-----ARDLFDRMPERNVV 268
Query: 354 PFVILSNIYAGLGRWEDVGRI 374
++ + Y L R E+ ++
Sbjct: 269 ACNVMLDGYVRLSRLEEACKL 289
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ S + ACA+L L GRQ+H L ++ +D AL+ Y KCG + A +F E+
Sbjct: 459 TYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEM 518
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
G ++I++WN ++ G NG+ +A+ +F + G +PD T+ ++S S+ G+ E
Sbjct: 519 VG-KDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEG 577
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADL 161
F M SLK V + ADL
Sbjct: 578 LGFFNSMTEE---YSLKPVAEHYACMADL 603
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D T +V Y + G L A +V + G + +N MI+G NGR + A++L
Sbjct: 110 DDFSWTVMVSCYARAGELELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLL--- 166
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSA 163
E PD +WNS ++G +Q G A + F++M MV +L V + D +A
Sbjct: 167 -REMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAA 225
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
G+ +V+ S T L++ Y + G+ S AR FD+ + + N M+
Sbjct: 226 SFFGRIESPNVV--------SWVT-LLNGYCRAGRISDARDLFDRMPER--NVVACNVML 274
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
GY R E A ++FD M + NS S+ ++S AG + +A + M
Sbjct: 275 DGYVRLSRLEEACKLFDEMPGK----NSISWTTIISGLARAGKLQEAKDLLDKM 324
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 155/382 (40%), Gaps = 91/382 (23%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG-TALVDMYLKCGCLPCA 65
+ PN V+++++++ Y + GR L ++ ++D Y++ L A
Sbjct: 232 ESPNVVSWVTLLNG-----YCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEA 286
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL--------------------- 104
+F E+ G +N ++W T+I+G+ G+ ++A +L + +
Sbjct: 287 CKLFDEMPG-KNSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMV 345
Query: 105 --AHEGFKP----DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
A + F D WN+MISG+ Q GM EA LF++M
Sbjct: 346 NDARQIFDGMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMP------------------ 387
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
NKD +I+ Y + GQ A F + K +
Sbjct: 388 ---------------------NKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRK--NTVS 424
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH--AGHVDKALQIFTM 276
WN++ISG+ +NG + A F LM++ + + +++ + L AC + A HV + L +
Sbjct: 425 WNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSLLV 484
Query: 277 ----MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHL 332
++D F ++ + GR+ EA+++ E+ + +++L+ +
Sbjct: 485 RSGHINDLFARN-------ALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDG---YA 534
Query: 333 NSDLGEEMAMKLQEMEPENPTP 354
++ G E +EME P
Sbjct: 535 SNGQGTEAISVFREMEANGVRP 556
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/387 (35%), Positives = 209/387 (54%), Gaps = 39/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+VT S++SAC L L G+ +HG ++ + SD +I T+L+ MY KC +
Sbjct: 316 RPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFR 375
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF SRN H G W+++I+G Q
Sbjct: 376 VFS--GASRN----------------------------HTG------PWSAIIAGCVQNE 399
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A LF++M+ + P++ + S+L A A L+ L+ H ++ + AT
Sbjct: 400 LVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAAT 459
Query: 188 ALISMYMKCGQPSWARRFFD--QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
L+ +Y KCG A + F+ Q + K D W A+ISGYG +G+ +A+++F M +
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN +F + L+AC H+G V++ L +F+ M + + + H+ C+VDLLGR+GRLDE
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A LI +P EPT +++ +LL AC H N LGE A KL E+EPEN +V+L+NIYA
Sbjct: 580 AYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
LGRW+D+ ++R M+ + L K PG S
Sbjct: 640 LGRWKDMEKVRNMMENVGLRKKPGHST 666
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 147/354 (41%), Gaps = 74/354 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V A L + G +HG L+ D + AL+ MY+ G + A NV
Sbjct: 115 PDGYTYPFVAKAAGELKSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K D +WN+MISG+ + G
Sbjct: 175 FDVMKNR------------------------------------DVISWNTMISGYYRNGY 198
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F+ M + G+ P + S+L C L L++G+ H V L + A
Sbjct: 199 MNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY+KCG+ AR F + E + D W MI+GY +G+ E+A+E+ LMQ E V+
Sbjct: 259 LVNMYLKCGRMDEARFVFGRMERR--DVITWTCMINGYIEDGDVENALELCRLMQFEGVR 316
Query: 249 PNSASFVAVLSACGHA-----------------------------------GHVDKALQI 273
PN+ + +++SACG A H+D ++
Sbjct: 317 PNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRV 376
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
F+ + GC+ + L R LD + + RE EP ++ +SLL A
Sbjct: 377 FSGASRNHTGPWSAIIAGCVQNELVRDA-LDLFKRMRREDVEPNIATLNSLLPA 429
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 39/320 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T +S++ C L L+ GR VH L + + ALV+MYLKCG + A
Sbjct: 215 DPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF GR E+ D TW MI+G+ + G
Sbjct: 275 VF----------------------GRMER--------------RDVITWTCMINGYIEDG 298
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +L MQ G+ P+ + S++SAC D L GK HG IR + D + T
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIET 358
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LISMY KC R F P W+A+I+G +N A+++F M++E V
Sbjct: 359 SLISMYAKCKHIDLCFRVFSGASRNHTGP--WSAIIAGCVQNELVRDALDLFKRMRREDV 416
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN A+ ++L A + + + I + G + +V + + G L+ A
Sbjct: 417 EPNIATLNSLLPAYATLADLRQTMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAH 475
Query: 308 ELIRELPEPTVSVYHSLLGA 327
++ + E S L GA
Sbjct: 476 KIFNGIQEKHKSKDVVLWGA 495
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGM--VPSLKCVTSVLSACADLSALKLGKETHG 172
++N +I + + G+ +A +F +M S G+ VP V A +L ++ LG HG
Sbjct: 82 SYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHG 141
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
++R+ D+ + AL++MYM G+ AR FD +K D WN MISGY RNG
Sbjct: 142 RILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDV--MKNRDVISWNTMISGYYRNGYM 199
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC 292
A+ +FD M E V P+ A+ V++L CGH ++ + ++++ L K E
Sbjct: 200 NDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEK-RLGDKIEVKNA 258
Query: 293 MVDLLGRSGRLDEAR 307
+V++ + GR+DEAR
Sbjct: 259 LVNMYLKCGRMDEAR 273
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 213/386 (55%), Gaps = 41/386 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ +T +S+ S A L R +HG +T + D +G A++DMY K G +
Sbjct: 339 PDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFI----- 393
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ A ++FEGL D +WNS+I+G+SQ G
Sbjct: 394 ---------------------------DSARKVFEGLP----VKDVISWNSLITGYSQNG 422
Query: 128 MRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ EA ++ M+ +G VP+ S+L+A + L ALK G + HG +I+ L D ++
Sbjct: 423 LANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVS 482
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T L+ MY KCG+ + A F +E+ WNA+IS +G +G AV++F MQ E
Sbjct: 483 TCLVDMYGKCGKLADALSLF--YEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEG 540
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP+ +FV++LSAC H+G VD+ F +M + +G++P +H+GCMVDL GR+G L++A
Sbjct: 541 VKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKA 600
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
++ +P P VSV+ +LLGAC H N +L ++ L ++E EN +V+LSNIYA L
Sbjct: 601 FNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKL 660
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G WE V +R + DR L K PG S+
Sbjct: 661 GHWEGVDEVRSLARDRGLKKTPGWSS 686
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 138/318 (43%), Gaps = 41/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + TF VI AC +L GR+VH L LK+ + D I + + Y + G + A N
Sbjct: 139 QSDHYTFPPVIRACGNL---DDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACN 195
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F N MI D TWN+MISGF G
Sbjct: 196 LFD-----------NMMIR-------------------------DIGTWNAMISGFYLNG 219
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA ++F++M+ + ++S+L C L + G H + I+ L D +
Sbjct: 220 KVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCN 279
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY K G+ A F+Q +++ D WN++++ + +N + A+ +++ M V
Sbjct: 280 ALINMYAKFGELRSAETIFNQMKVR--DIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGV 337
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + V++ S G+ + I + ++D+ + G +D AR
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR 397
Query: 308 ELIRELPEPTVSVYHSLL 325
++ LP V ++SL+
Sbjct: 398 KVFEGLPVKDVISWNSLI 415
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 131/328 (39%), Gaps = 54/328 (16%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
+ +E + F + C + +Q+H L + K + L++ Y G +P
Sbjct: 37 VENEKREIDFNRIFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPH 93
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F +++ D TWNSMIS ++
Sbjct: 94 ARLTFDQIQ------------------------------------TKDVYTWNSMISAYA 117
Query: 125 QLGMRFEAFKLFEKMQSTGMVPS-LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
++G A F + ST + S V+ AC +L G++ H V++ D
Sbjct: 118 RIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFECDV 174
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+A + I Y + G S A FD I+ D WNAMISG+ NG+ A+E+FD M+
Sbjct: 175 YIAASFIHFYSRFGFVSLACNLFDNMMIR--DIGTWNAMISGFYLNGKVAEALEVFDEMR 232
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH--FGC--MVDLLGR 299
+ V +S + ++L C + + I + +K E F C ++++ +
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHV-----YAIKLGLEFDLFVCNALINMYAK 287
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGA 327
G L A + ++ + ++SLL A
Sbjct: 288 FGELRSAETIFNQMKVRDIVSWNSLLAA 315
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/388 (35%), Positives = 205/388 (52%), Gaps = 44/388 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VTFI++++A +SL + G+Q+H L LK +DT I AL+ Y KCG + N
Sbjct: 589 DPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCEN 648
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D +WNSMISG+
Sbjct: 649 IFSRMSD-----------------------------------RQDEVSWNSMISGYIHNE 673
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A + M G +VLSACA ++ L+ G E HG +RA L D + +
Sbjct: 674 LLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGS 733
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KCG+ +A RFF E+ P + WN+MISGY R+G ++++F M+ +
Sbjct: 734 ALVDMYAKCGRIDYASRFF---EMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQG 790
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ +FV VLSAC HAG V++ F M + +GL P+ EHF CMVDLLGR G L++
Sbjct: 791 PLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKM 850
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHL---NSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+ + ++P +P V ++ ++LGAC C N+ LG A L EMEP N +++LSN+Y
Sbjct: 851 EDFLNQMPVKPNVLIWRTVLGAC-CRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMY 909
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A G+W+DV + R + + K G S
Sbjct: 910 ASGGKWDDVAKTRVAMRKAFVKKEAGCS 937
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 50/365 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T IS +S+CASL ++ G Q+H LK+ D + AL+ +Y +CG +
Sbjct: 488 PSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKA 547
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L + ++WN++I + SE +M
Sbjct: 548 FS-LMLDYDHVSWNSLIGAL---ADSEPSM------------------------------ 573
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA + F M G P+ ++L+A + LS +LGK+ H V++ ++ D ++ A
Sbjct: 574 -LEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENA 632
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++ Y KCG + F + + D+ + WN+MISGY N A+++ M Q+ +
Sbjct: 633 LLACYGKCGDMGYCENIFSRMSDRQDEVS-WNSMISGYIHNELLPKAMDMVWFMMQKGQR 691
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF-----TMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +F VLSAC +++ +++ ++ D + +VD+ + GR+
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIG------SALVDMYAKCGRI 745
Query: 304 DEARELIRELPEPTVSVYHSLLG--ACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
D A +P + ++S++ A H L MKLQ P++ T +LS
Sbjct: 746 DYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSAC 805
Query: 362 -YAGL 365
+AGL
Sbjct: 806 SHAGL 810
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 157/336 (46%), Gaps = 51/336 (15%)
Query: 2 KECLSD--EPNSVTFISVISACASL----LYLQFGRQVHGLTLKIEKQS---DTMIGTAL 52
KE + D +PN TF S+ISA SL L L + L ++EK D +G+AL
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVL-----LEQLLTRVEKSGFLHDLYVGSAL 325
Query: 53 VDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
V + K G + A N+FQ++ RN+++ N +I G++ R E+A+ELF + + + +
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMS-YRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELN 383
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
P ++ +++ F + F + E + + G E H
Sbjct: 384 PNSYMIILTAFPE-------FHVLENGK------------------------RKGSEVHA 412
Query: 173 HVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+IR+ L N ++ LI+MY KCG + A F + K D WN+MI+G +N +
Sbjct: 413 FLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNK--DSVTWNSMITGLDQNKQ 470
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
+ AV+ F M++ ++ P++ + ++ LS+C G + Q+ GL
Sbjct: 471 FLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHC-EGLKLGLDLDVSVSN 529
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++ L G G + E ++ + + ++SL+GA
Sbjct: 530 ALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA 565
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS--ALKLGKETH 171
+W+ +ISG+++ M EA +LF KM S G +P+ SV+ AC + LK G + H
Sbjct: 140 VSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIH 199
Query: 172 GHVIRADLNKDESMATALISMYMKC-GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
G + + D + + LISMY G +ARR FD I P + N+MIS Y + G
Sbjct: 200 GLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDS--IWPRNLVSLNSMISVYCQRG 257
Query: 231 EYESAVEIFDLMQQE----KVKPNSASFVAVLSACGHAGHVDKAL--QIFTMMDDDFGLK 284
+ SA +IF MQ+E +KPN +F +++SA + L Q+ T ++ G
Sbjct: 258 DAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKS-GFL 316
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL 344
+V ++G + A+ + +++ V + L+ + E+ M++
Sbjct: 317 HDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM 376
Query: 345 QEMEPENPTPFVIL 358
++ NP ++I+
Sbjct: 377 KDSVELNPNSYMII 390
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 48/267 (17%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGR----QVHGLTLKIEK-QSDTMIGTALVDM 55
MK+ + PNS ++ +++A L+ G+ +VH ++ + IG L++M
Sbjct: 376 MKDSVELNPNS--YMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINM 433
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
Y KCG + A VF+ + D T
Sbjct: 434 YAKCGAINDACVVFRLMD------------------------------------NKDSVT 457
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WNSMI+G Q EA K F++M+ T + PS + S LS+CA L + +G++ H +
Sbjct: 458 WNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGL 517
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNG-EYE 233
+ L+ D S++ AL+++Y +CG + + F + D D WN++I +
Sbjct: 518 KLGLDLDVSVSNALLALYGECG---YVKECQKAFSLMLDYDHVSWNSLIGALADSEPSML 574
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSA 260
AVE F +M + PN +F+ +L+A
Sbjct: 575 EAVESFLVMMRAGWDPNRVTFITILAA 601
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
K +E H + + D + LI++Y + G R+ FD+ ++ + W+ +IS
Sbjct: 90 KDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLR--NLVSWSCLIS 147
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
GY RN A E+F M + PN +F +V+ AC G
Sbjct: 148 GYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/381 (35%), Positives = 207/381 (54%), Gaps = 34/381 (8%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V+ ACA ++ L+ G VH +K + D + LV MY C C C
Sbjct: 225 PNKFTFPFVLKACAGMMRLELGGAVHASMVKFGFEEDPHVRNTLVHMY--CCC--CQ--- 277
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
GS ++ A ++F+ E D TW++MI G+++ G
Sbjct: 278 ----DGSSGPVS----------------AKKVFD----ESPVKDSVTWSAMIGGYARAGN 313
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LF +MQ TG+ P + SVLSACADL AL+LGK ++ R ++ + + A
Sbjct: 314 SARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERKNIMRSVELCNA 373
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI M+ KCG A + F + +++ W +MI G +G AV +FD M ++ V
Sbjct: 374 LIDMFAKCGDVDRAVKVFREMKVR--TIVSWTSMIVGLAMHGRGLEAVLVFDEMMEQGVD 431
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VLSAC H+G VDK F M++ F + PK EH+GCMVD+L R+GR++EA E
Sbjct: 432 PDDVAFIGVLSACSHSGLVDKGHYYFNTMENMFSIVPKIEHYGCMVDMLSRAGRVNEALE 491
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+R +P EP ++ S++ AC LGE +A +L EP + + +V+LSNIYA L R
Sbjct: 492 FVRAMPVEPNQVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLR 551
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
WE ++R+M++ + + K+PG
Sbjct: 552 WEKKTKVREMMDVKGMRKIPG 572
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 12/249 (4%)
Query: 112 DPATWNSMISGFSQLGM-RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D +N++I F+Q + A + + M+ + P+ VL ACA + L+LG
Sbjct: 190 DAFLFNTLIRAFAQTTHSKPHALRFYNTMRRHAVSPNKFTFPFVLKACAGMMRLELGGAV 249
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQ-----PSWARRFFDQFEIKPDDPAFWNAMISG 225
H +++ +D + L+ MY C Q P A++ FD+ +K D W+AMI G
Sbjct: 250 HASMVKFGFEEDPHVRNTLVHMYCCCCQDGSSGPVSAKKVFDESPVK--DSVTWSAMIGG 307
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y R G AV +F MQ V P+ + V+VLSAC G ++ + + ++ +
Sbjct: 308 YARAGNSARAVTLFREMQVTGVCPDEITMVSVLSACADLGALELGKWLESYIERK-NIMR 366
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
E ++D+ + G +D A ++ RE+ T+ + S++ H G E +
Sbjct: 367 SVELCNALIDMFAKCGDVDRAVKVFREMKVRTIVSWTSMIVGLAMH---GRGLEAVLVFD 423
Query: 346 EMEPENPTP 354
EM + P
Sbjct: 424 EMMEQGVDP 432
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/383 (34%), Positives = 206/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++ S ISACA + + G Q+H +D I LV +Y +CG
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGI------- 496
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S++A FE + H+ + TWN +ISGF+Q G+
Sbjct: 497 -------------------------SKEAFSSFEAIEHK----EGITWNGLISGFAQSGL 527
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA K+F KM G ++ S +SA A+L+ +K GK+ H VI+ + ++ A
Sbjct: 528 YEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNA 587
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LIS+Y KCG A+ D FE+ + WN +I+ ++G A+++FD M+Q+ +K
Sbjct: 588 LISLYGKCGSIEDAK--MDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLK 645
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VL+AC H G V++ L F M ++ G+ P+ +H+ C+VD+LGR+G+LD A+
Sbjct: 646 PSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKR 705
Query: 309 LIRELPEPTVS-VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+P P S V+ +LL AC H N ++GE A L E+EP + +V+LSN YA G+
Sbjct: 706 FVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGK 765
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W +IR+++ DR + K PG S
Sbjct: 766 WASRDQIRKIMKDRGVRKEPGRS 788
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 47/348 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S++SAC Q GR +H K S+T +G AL+ +YL+C A V
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRV 200
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D T+N++ISG +Q G
Sbjct: 201 FCDM------------------------------------LYCDSVTFNTLISGHAQCGH 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F++MQ +G+ P + S+L+AC+ + L+ GK+ H ++++A ++ D M +
Sbjct: 225 GDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+K G A + FD + + WN M+ YG+ + + +IF M V+
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGD--RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVR 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C H G + QI ++ + G + G ++D+ + G LD+A+
Sbjct: 343 PNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKN-GFQSDMYVSGVLIDMYSKYGWLDKAQR 401
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PEN 351
++ + E V + S++ ++ + +E +EM+ P+N
Sbjct: 402 ILDMIEEKDVVSWTSMIAG---YVQHEFCKEALETFKEMQACGIWPDN 446
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 166/357 (46%), Gaps = 47/357 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ ++ C + G Q+H LT+K QSD + L+DMY K G L
Sbjct: 342 RPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLD---- 397
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++++ +++ E + D +W SMI+G+ Q
Sbjct: 398 -------------------------KAQRILDMIE-------EKDVVSWTSMIAGYVQHE 425
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F++MQ+ G+ P + S +SACA + A+ G + H V + + D S+
Sbjct: 426 FCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWN 485
Query: 188 ALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
L+ +Y +CG ++ F FE I+ + WN +ISG+ ++G YE A+++F M Q
Sbjct: 486 GLVYLYARCGI---SKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAG 542
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
K N +FV+ +SA + + + QI + G + E ++ L G+ G +++A
Sbjct: 543 AKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSIEDA 601
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILS 359
+ E+ + +++++ C H DL ++ MK Q ++P + T +L+
Sbjct: 602 KMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ--MKQQGLKPSDVTFVGVLT 656
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 134/281 (47%), Gaps = 39/281 (13%)
Query: 47 MIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
+IG L+D+Y K G + A VF+EL N+
Sbjct: 78 IIGNLLIDLYAKKGFVRRARRVFEELSVRDNV---------------------------- 109
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+W +++SG++Q G+ EA +L+ +M +G+VP+ ++S+LSAC +L
Sbjct: 110 --------SWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQL 161
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H V + + + ALIS+Y++C A R F ++ D +N +ISG+
Sbjct: 162 GRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVF--CDMLYCDSVTFNTLISGH 219
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G + A+ IFD MQ + P+S + ++L+AC G + K Q+ + + G+
Sbjct: 220 AQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKA-GMSLD 278
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
G ++DL +SG ++EA ++ V +++ +L A
Sbjct: 279 YIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVA 319
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+SVT S+++AC+++ L+ G+Q+H LK D ++ +L+D+Y+K G +
Sbjct: 242 PDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDI------ 295
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
E+A+++F+ G + + WN M+ + Q+
Sbjct: 296 --------------------------EEALQIFD----SGDRTNVVLWNLMLVAYGQIDD 325
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++F +F +M + G+ P+ +L C + LG++ H I+ D ++
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY K G A+R D E K D W +MI+GY ++ + A+E F MQ +
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEK--DVVSWTSMIAGYVQHEFCKEALETFKEMQACGIW 443
Query: 249 PNSASFVAVLSACGHAGHVDKALQI 273
P++ + +SAC V + QI
Sbjct: 444 PDNIGLASAISACAGIKAVHQGSQI 468
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 206/383 (53%), Gaps = 41/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NSVT + +I AC S + L+ G +H TLK SD + + MY+KCG + A +F
Sbjct: 142 NSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLF 201
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ + G++ +WN+M+SG++Q G+
Sbjct: 202 DEMP-----------VKGLI-------------------------SWNAMVSGYAQNGLA 225
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+L+ M G+ P + VLS+CA+L A +G E + + + + AL
Sbjct: 226 TNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNAL 285
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I+MY +CG + A+ FD P+ W A+I GYG +G E AV++F M + ++
Sbjct: 286 INMYARCGNLTKAQAVFDGM---PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIE 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV VLSAC HAG D+ L+ F MM ++ L+P EH+ CMVDLLGR+GRL EA+
Sbjct: 343 PDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQT 402
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P +P +V+ +LLGAC H N +L E ++ E+EPEN +V+LSNIY+
Sbjct: 403 LIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANN 462
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
+ V RIR M+ +++L K PG S
Sbjct: 463 SKGVLRIRIMMKEKKLKKDPGCS 485
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 161/363 (44%), Gaps = 42/363 (11%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D PN+ TF + +CA+L G Q HG K+ + + T L+ MY K + A
Sbjct: 36 DRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNAR 95
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF+E SR + +N+++SG+
Sbjct: 96 KVFEENFHSRKL----------------------------------TVCYNALVSGYVSN 121
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A LF +M G+ + + ++ AC L+LG H ++ + D S+
Sbjct: 122 SKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVV 181
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
I+MYMKCG ++A++ FD+ +K WNAM+SGY +NG + +E++ M
Sbjct: 182 NCFITMYMKCGSVNYAQKLFDEMPVK--GLISWNAMVSGYAQNGLATNVLELYRNMDMNG 239
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V P+ + V VLS+C + G ++ F M F P + ++++ R G L +
Sbjct: 240 VHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNN--ALINMYARCGNLTK 297
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-Y 362
A+ + +PE T+ + +++G H + ++ ++ M +EP+ +LS +
Sbjct: 298 AQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSH 357
Query: 363 AGL 365
AGL
Sbjct: 358 AGL 360
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WN+ + ++ +A L+ +M G P+ L +CA LS LG + HG +
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + T LISMY K AR+ F++ +NA++SGY N + A
Sbjct: 68 KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCM 293
V +F M +E V NS + + ++ AC +++ +L T+ +G C
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL---KYGFDSDVSVVNCF 184
Query: 294 VDLLGRSGRLDEARELIRELP 314
+ + + G ++ A++L E+P
Sbjct: 185 ITMYMKCGSVNYAQKLFDEMP 205
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 112/248 (45%), Gaps = 12/248 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT + V+S+CA+L G +V S+ + AL++MY +CG L A
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQA 300
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + R +++W +I G ++G E A++LF+ + G +PD + ++S S G
Sbjct: 301 VFDGMP-ERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAG 359
Query: 128 MRFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + + F+ M+ + C+ +L L KE + + D
Sbjct: 360 LTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRL------KEAQTLIESMPIKPDG 413
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ AL+ A F++ E++P++ ++ + + Y + + I +M
Sbjct: 414 AVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMM 473
Query: 243 QQEKVKPN 250
+++K+K +
Sbjct: 474 KEKKLKKD 481
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 203/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++ S SACA + ++ G Q+H +D I LV++Y +C
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC--------- 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
GRSE+A LF + H+ D TWN +ISGF Q +
Sbjct: 496 -----------------------GRSEEAFSLFREIDHK----DEITWNGLISGFGQSRL 528
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F KM G ++ S +SA A+L+ +K GK+ HG ++ + +A A
Sbjct: 529 YEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LIS+Y KCG A+ F + ++ + WN +I+ ++G A+++FD M+QE +K
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLR--NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL+AC H G V++ L F M + +GL P +H+ C+VD+LGR+G+LD AR
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+P ++ +LL AC H N ++GE A L E+EP + +V+LSN YA G+
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + ++R+M+ DR + K PG S
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRS 789
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 172/385 (44%), Gaps = 47/385 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ ++ C ++ G Q+H L++K +SD + L+DMY K CL
Sbjct: 343 HPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLD---- 398
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++ K +E+ E K D +W SMI+G+ Q
Sbjct: 399 -------------------------KARKILEMLE-------KRDVVSWTSMIAGYVQHD 426
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F++MQ G+ P + S SACA + A++ G + H V + D S+
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+++Y +CG+ A F EI D WN +ISG+G++ YE A+ +F M Q
Sbjct: 487 TLVNLYARCGRSEEAFSLFR--EIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA 544
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K N +F++ +SA + + + Q+ G + E ++ L G+ G +++A+
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAK 603
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILSNI-Y 362
+ E+ +++++ +C H DL ++ MK + ++P + T +L+ +
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQ--MKQEGLKPNDVTFIGVLAACSH 661
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLP 387
GL E + + M N L +P
Sbjct: 662 VGLVE-EGLSYFKSMSNVYGLNPIP 685
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 47/348 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV+SAC GR +H K S+T +G AL+ +YL G A V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ LF D T+N++ISG +Q G
Sbjct: 202 FCDM---------------------------LF---------CDRVTFNTLISGHAQCGH 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++F++MQ +G+ P V S+L+ACA + L+ GK+ H ++++A ++ D +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KCG A F+ + + WN M+ YG+ + + EIF MQ +
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGD--RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C G ++ QI ++ + G + G ++D+ + LD+AR+
Sbjct: 344 PNKFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFESDMYVSGVLIDMYSKYRCLDKARK 402
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PEN 351
++ L + V + S++ ++ D EE +EM+ P+N
Sbjct: 403 ILEMLEKRDVVSWTSMIAG---YVQHDFCEEALATFKEMQDCGVWPDN 447
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 161/372 (43%), Gaps = 45/372 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT S+++ACAS+ LQ G+Q+H LK D + +L+D+Y+KCG + AH+
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + G + + WN M+ + Q+
Sbjct: 302 IF------------------------------------NLGDRTNVVLWNLMLVAYGQIS 325
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++F++F +MQ+TG+ P+ +L C ++LG++ H I+ D ++
Sbjct: 326 DLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI MY K AR+ + E + D W +MI+GY ++ E A+ F MQ V
Sbjct: 386 VLIDMYSKYRCLDKARKILEMLEKR--DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P++ + SAC + + LQI + G + +V+L R GR +EA
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAF 502
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP--TPFVILSNIYAGL 365
L RE+ ++ L+ S L E+ M +M F +S I A L
Sbjct: 503 SLFREIDHKDEITWNGLISG---FGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA-L 558
Query: 366 GRWEDVGRIRQM 377
D+ + +Q+
Sbjct: 559 ANLADIKQGKQV 570
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 39/296 (13%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
++H ++ +D +IG L+D+Y K G + A VF+EL
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR---------------- 107
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
D +W +M+SG++Q G+ EAF+L+ +M T ++P+ +
Sbjct: 108 --------------------DHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+SVLSAC G+ H V + + + ALI++Y+ G A R F ++
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVF--CDM 205
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
D +N +ISG+ + G E A++IFD MQ ++P+ + ++L+AC G + K
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
Q+ + + G+ G ++DL + G ++ A ++ V +++ +L A
Sbjct: 266 QLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T S++SAC+ L L+ G++VHG ++ + D + +++ +Y+ CG L +
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F AME +WN++I+G+ Q G
Sbjct: 304 FD--------------------------AME----------DKSLVSWNTVITGYLQNGF 327
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F +M G+ + V AC+ L +L+LG+E H + ++ L D +A +
Sbjct: 328 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 387
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY K G + + + F+ +K A WNAMI GYG +G + A+++F+ MQ+
Sbjct: 388 LIDMYAKNGSITQSSKVFNG--LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 445
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC H+G + + L+ M FGLKP +H+ C++D+LGR+G+LD+A
Sbjct: 446 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 505
Query: 309 LIRE--LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++ E E V ++ SLL +C H N ++GE++A KL E+EPE P +V+LSN+YAGLG
Sbjct: 506 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 565
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WEDV ++RQ +N+ L K G S
Sbjct: 566 KWEDVRKVRQRMNEMSLRKDAGCS 589
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 181/420 (43%), Gaps = 87/420 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+ CA + G+ VHG +K+ + ++ AL+DMY KCGC+ A +
Sbjct: 40 PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMI 99
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA---------------------HE 107
F+ + ++N+++WNTM+ G G + ++ + HE
Sbjct: 100 FK-MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 158
Query: 108 GFKP----------------DPATWNSMISGFSQLGMRFEAFKLFE-------------- 137
F P + N+ ++ +++ G A ++F
Sbjct: 159 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALI 218
Query: 138 -----------------KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+M+ +G++P V S+LSAC+ L +L+LGKE HG +IR L
Sbjct: 219 GGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLE 278
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+D + +++S+Y+ CG+ + FD E K WN +I+GY +NG + A+ +F
Sbjct: 279 RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS--LVSWNTVITGYLQNGFPDRALGVFR 336
Query: 241 LMQQEKVKPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MV 294
M ++ S + V AC G A + +++DD C ++
Sbjct: 337 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDD-------AFIACSLI 389
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D+ ++G + ++ ++ L E + + +++++ H L +E +EM+ P
Sbjct: 390 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIH---GLAKEAIKLFEEMQRTGHNP 446
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 39/268 (14%)
Query: 114 ATWNSMISGFSQLGMRFEAFKLF-EKMQSTG---MVPSLKCVTSVLSACADLSALKLGKE 169
+WNSMI FS G E+F L E M+ G +P + + +VL CA + LGK
Sbjct: 4 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 63
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG ++ L+K+ + AL+ MY KCG + A+ F K + WN M+ G+
Sbjct: 64 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAE 121
Query: 230 GEYESAVEIFDLMQQ-----EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFG 282
G+ FD+++Q E VK + + + + C H + K L +++
Sbjct: 122 GDTHGT---FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL------ 172
Query: 283 LKPKQEHF------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD- 335
KQE V + G L A+ + + TV+ +++L+G H S+
Sbjct: 173 ---KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG---HAQSND 226
Query: 336 ----LGEEMAMKLQEMEPENPTPFVILS 359
L + MK+ + P++ T +LS
Sbjct: 227 PRLSLDAHLQMKISGLLPDSFTVCSLLS 254
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 203/384 (52%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T S++ AC+ L G+ +HG ++ +D + +L+D+Y KCG A V
Sbjct: 307 PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETV 366
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + + K +WN MIS + +G
Sbjct: 367 FSKTQ------------------------------------KDVAESWNVMISSYISVGN 390
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
F+A +++++M S G+ P + TSVL AC+ L+AL+ GK+ H + + L DE + +A
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A R F+ I D W MIS YG +G+ A+ FD MQ+ +K
Sbjct: 451 LLDMYSKCGNEKEAFRIFNS--IPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + +AVLSACGHAG +D+ L+ F+ M +G++P EH+ CM+D+LGR+GRL EA E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYE 568
Query: 309 LIRELPEPT--VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I++ PE + + +L AC HL LG+ +A L E P++ + +++L N+YA
Sbjct: 569 IIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGE 628
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W+ R+R + + L K PG S
Sbjct: 629 SWDAARRVRLKMKEMGLRKKPGCS 652
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 165/364 (45%), Gaps = 48/364 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPNSV+ ISAC+ LL+L+ G+++H +K + D + +ALVDMY KC CL A
Sbjct: 205 EPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VFQ++ + WNSMI G+ G
Sbjct: 265 VFQKMP------------------------------------RKSLVAWNSMIKGYVAKG 288
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++ +M G PS +TS+L AC+ L GK HG+VIR+ +N D +
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI +Y KCG+ + A F + + D WN MIS Y G + AVE++D M V
Sbjct: 349 SLIDLYFKCGEANLAETVFSK--TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGV 406
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP+ +F +VL AC ++K QI + + L+ + ++D+ + G EA
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKCGNEKEAF 465
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PENPTPFVILSNI- 361
+ +P+ V + ++ A H E + EM+ P+ T +LS
Sbjct: 466 RIFNSIPKKDVVSWTVMISAYGSHGQP---REALYQFDEMQKFGLKPDGVTLLAVLSACG 522
Query: 362 YAGL 365
+AGL
Sbjct: 523 HAGL 526
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 38/256 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF +VI A +L GR +H L +K D ++ ++LV MY K N+
Sbjct: 105 PDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK-------FNL 157
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E ++++F+ + D A+WN++IS F Q G
Sbjct: 158 F-------------------------ENSLQVFDEMPER----DVASWNTVISCFYQSGE 188
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +LF +M+S+G P+ +T +SAC+ L L+ GKE H ++ DE + +A
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KC AR F + K WN+MI GY G+ +S VEI + M E +
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKS--LVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 249 PNSASFVAVLSACGHA 264
P+ + ++L AC +
Sbjct: 307 PSQTTLTSILMACSRS 322
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 143/317 (45%), Gaps = 40/317 (12%)
Query: 11 SVTFISVISACA-SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
S +S++ C S L+ + VH L + + D ++ +L+++Y C A +VF
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + D WNS++SG+S+ M
Sbjct: 63 ENFD-----------------------------------IRSDVYIWNSLMSGYSKNSMF 87
Query: 130 FEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ ++F+++ + + VP +V+ A L LG+ H V+++ D +A++
Sbjct: 88 HDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASS 147
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY K + + FD E+ D A WN +IS + ++GE E A+E+F M+ +
Sbjct: 148 LVGMYAKFNLFENSLQVFD--EMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS S +SAC +++ +I G + + +VD+ G+ L+ ARE
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKK-GFELDEYVNSALVDMYGKCDCLEVARE 264
Query: 309 LIRELPEPTVSVYHSLL 325
+ +++P ++ ++S++
Sbjct: 265 VFQKMPRKSLVAWNSMI 281
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 85/152 (55%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VTF SV+ AC+ L L+ G+Q+H + ++D ++ +AL+DMY KCG A
Sbjct: 407 KPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFR 466
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +++++W MI+ +G+ +A+ F+ + G KPD T +++S G
Sbjct: 467 IFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAG 525
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
+ E K F +M+S G+ P ++ C+ +L
Sbjct: 526 LIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 203/383 (53%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++ S SACA + ++ G Q+H +D I LV++Y +C
Sbjct: 445 PDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC--------- 495
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
GRSE+A LF + H+ D TWN +ISGF Q +
Sbjct: 496 -----------------------GRSEEAFSLFREIEHK----DEITWNGLISGFGQSRL 528
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F KM G ++ S +SA A+L+ +K GK+ HG ++ + +A A
Sbjct: 529 YKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANA 588
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LIS+Y KCG A+ F + ++ + WN +I+ ++G A+++FD M+QE +K
Sbjct: 589 LISLYGKCGSIEDAKMIFSEMSLR--NEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLK 646
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL+AC H G V++ L F M + +GL P +H+ C+VD+LGR+G+LD AR
Sbjct: 647 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARR 706
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+P ++ +LL AC H N ++GE A L E+EP + +V+LSN YA G+
Sbjct: 707 FVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGK 766
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + ++R+M+ DR + K PG S
Sbjct: 767 WANRDQVRKMMKDRGIRKEPGRS 789
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 174/385 (45%), Gaps = 47/385 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN T+ ++ C ++ G Q+H L++K +SD + L+DMY K GCL
Sbjct: 343 HPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLD---- 398
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
++ K +E+ E K D +W SMI+G+ Q
Sbjct: 399 -------------------------KARKILEMLE-------KRDVVSWTSMIAGYVQHD 426
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F++MQ G+ P + S SACA + A++ G + H V + D S+
Sbjct: 427 FCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWN 486
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+++Y +CG+ A F + E K D WN +ISG+G++ Y+ A+ +F M Q
Sbjct: 487 TLVNLYARCGRSEEAFSLFREIEHK--DEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K N +F++ +SA + + + Q+ G + E ++ L G+ G +++A+
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDAK 603
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILSNI-Y 362
+ E+ +++++ +C H DL ++ MK + ++P + T +L+ +
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQ--MKQEGLKPNDVTFIGVLAACSH 661
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLP 387
GL E + + M N L +P
Sbjct: 662 VGLVE-EGLSYFKSMSNVYGLNPIP 685
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 47/348 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV+SAC GR +H K S+T +G AL+ +YL G A V
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ LF D T+N++ISG +Q G
Sbjct: 202 FCDM---------------------------LF---------CDRVTFNTLISGHAQCGH 225
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++F++MQ +G+ P V S+L+ACA + L+ GK+ H ++++A ++ D +
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KCG A F+ + + WN M+ YG+ + + EIF MQ +
Sbjct: 286 LLDLYVKCGDIETAHDIFNLGD--RTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIH 343
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C G ++ QI ++ + G + G ++D+ + G LD+AR+
Sbjct: 344 PNQFTYPCILRTCTCTGQIELGEQIHSLSIKN-GFESDMYVSGVLIDMYSKYGCLDKARK 402
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-----PEN 351
++ L + V + S++ ++ D EE +EM+ P+N
Sbjct: 403 ILEMLEKRDVVSWTSMIAG---YVQHDFCEEALATFKEMQDCGVWPDN 447
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT S+++ACAS+ LQ G+Q+H LK D + +L+D+Y+KCG + AH+
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHD 301
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + G + + WN M+ + Q+
Sbjct: 302 IF------------------------------------NLGDRTNVVLWNLMLVAYGQIS 325
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
++F++F +MQ+TG+ P+ +L C ++LG++ H I+ D ++
Sbjct: 326 DLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSG 385
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI MY K G AR+ + E + D W +MI+GY ++ E A+ F MQ V
Sbjct: 386 VLIDMYSKYGCLDKARKILEMLEKR--DVVSWTSMIAGYVQHDFCEEALATFKEMQDCGV 443
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P++ + SAC + + LQI + G + +V+L R GR +EA
Sbjct: 444 WPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLVNLYARCGRSEEAF 502
Query: 308 ELIRELPEPTVSVYHSLL 325
L RE+ ++ L+
Sbjct: 503 SLFREIEHKDEITWNGLI 520
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 168/397 (42%), Gaps = 75/397 (18%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
++H ++ +D +IG L+D+Y K G + A VF+EL
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSR---------------- 107
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
D +W +M+SG++Q G+ EAF+L+ +M T ++P+ +
Sbjct: 108 --------------------DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVL 147
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+SVLSAC G+ H V + + + ALI++Y+ G A R F ++
Sbjct: 148 SSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVF--CDM 205
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
D +N +ISG+ + G E A++IFD MQ ++P+ + ++L+AC G + K
Sbjct: 206 LFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGK 265
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL---------------------I 310
Q+ + + G+ G ++DL + G ++ A ++ I
Sbjct: 266 QLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQI 324
Query: 311 RELPE--------------PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPF 355
+L + P Y +L C C +LGE++ ++ ++ +
Sbjct: 325 SDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS 384
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+L ++Y+ G + +I +M+ R + + AG
Sbjct: 385 GVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAG 421
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 199/342 (58%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++ + A +F+ + RNI +WNTMI G G +A + F+ +
Sbjct: 301 NAMIAGYVQTKKMDIARELFESMP-CRNISSWNTMITGYGQIGDIAQARKFFDMMPQR-- 357
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +W ++I+G++Q G EA +F +++ G + LS CAD++AL+LGK+
Sbjct: 358 --DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG ++ + AL++MY KCG A F+ E K D WN M++GY R+
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK--DVVSWNTMLAGYARH 473
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G A+ +F+ M+ VKP+ + V VLSAC H G +D+ + F M D+G+ P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CM+DLLGR+GRL+EA++LIR +P +P + + +LLGA H N++LGE+ A + +ME
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P+N +V+LSN+YA GRW D ++R + D + K+PG S
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF +S CA + L+ G+Q+HG +K+ + +G AL+ MY KCG + A++ F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ +++++WNTM+AG +G +A+ +FE + G KPD T ++S S G+
Sbjct: 453 EGIE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVL 155
+ F M + G++P+ K T ++
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMI 538
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 136/349 (38%), Gaps = 70/349 (20%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ YL+ A N+F ++ R++ +WN M+ G + N R A LF+ + +
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK-- 140
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQS------TGMVPSLKCVTSVLSACADLSA 163
D +WNS++SG++Q G EA ++F+ M G++ + + AC
Sbjct: 141 --DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACL---- 194
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+ + + D L+ +++ + AR FD+ ++ D WN MI
Sbjct: 195 ----------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR--DAISWNTMI 242
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY + G A +FD E + ++ A++S G+V
Sbjct: 243 SGYAQGGGLSQARRLFD----ESPTRDVFTWTAMVS-----GYV---------------- 277
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
++G LDEA+ E+PE Y++++ D+ E+
Sbjct: 278 ---------------QNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL--- 319
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+ M N + + + Y +G + M+ R I AG
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 64/303 (21%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D ++ Y++ L A +F +L +++++WN++++G NG ++A E+F+
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLF-DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL- 161
+ + + +WN +++ + G EA LFE ++ S C+ L
Sbjct: 167 NMPEK----NSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI-SWNCLMGGFVRKKKLG 221
Query: 162 ------------SALKLGKETHGHVIRADLNK-----DESMA------TALISMYMKCGQ 198
A+ G+ L++ DES TA++S Y++ G
Sbjct: 222 DARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGM 281
Query: 199 PSWARRFFDQ----------------------------FEIKP-DDPAFWNAMISGYGRN 229
A+ FFD+ FE P + + WN MI+GYG+
Sbjct: 282 LDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQI 341
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G+ A + FD+M Q + S+ A+++ +GH ++AL +F + D G +
Sbjct: 342 GDIAQARKFFDMMPQR----DCVSWAAIIAGYAQSGHYEEALNMFVEIKQD-GESLNRAT 396
Query: 290 FGC 292
FGC
Sbjct: 397 FGC 399
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 54/238 (22%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+IL WN I+ M NG + A+ +F + + ++N+MISG+ + A LF
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++M + +T + C +LG
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNC------RLGD---------------------------- 129
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
ARR FD K D WN+++SGY +NG + A E+FD M ++ NS S+
Sbjct: 130 -----ARRLFDLMPEK--DVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNG 178
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+L+A H G +++A +F D+ L + C++ R +L +AR L ++P
Sbjct: 179 LLAAYVHNGRIEEACLLFE-SKSDWDLIS----WNCLMGGFVRKKKLGDARWLFDKMP 231
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 37/128 (28%)
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
+ G +D + F M++++ + P +H+ CM+DLLGR RL+E
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819
Query: 323 SLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQ 382
+LLGA H N++LGE+ A +M P+N +G+ + DVG
Sbjct: 820 ALLGASRIHGNTELGEKAAQMFFKMGPQN-----------SGISKMRDVG---------- 858
Query: 383 LTKLPGIS 390
+ K+PG S
Sbjct: 859 VQKVPGYS 866
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+K D WN IS + RNG +SA+ +F+ M + +S S+ A++S +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNL 98
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGA 327
A +F M P+++ F V L G R+ RL +AR L +PE V ++SLL
Sbjct: 99 ARNLFDQM-------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSG 151
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+ + +E M +N + L Y GR E+
Sbjct: 152 ---YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
>gi|357462829|ref|XP_003601696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490744|gb|AES71947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 616
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/387 (34%), Positives = 219/387 (56%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASL--LYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
+P+ F S+I ACA+L ++++ G+Q+H L D ++ ++LVDMY K
Sbjct: 106 QPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYG 165
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + +I +W MI+G +GR +A+ELF FK + W ++ISG Q
Sbjct: 166 RAVFDSIFELSSI-SWTAMISGYARSGRKLEALELFR---ESPFK-NLYAWTALISGLVQ 220
Query: 126 LGMRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
G +A LF +M+ G+ + ++SV+ ACA+ + +LGK+ H VI
Sbjct: 221 SGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLF 280
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ AL+ MY KC A+ F E++ D W ++I G ++G E A+ ++D M
Sbjct: 281 ISNALVDMYAKCSDVVAAKYIF--CEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVL 338
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKPN +FV ++ AC H G V K +F M +DFG++P +H+ C++DL RSG LD
Sbjct: 339 AGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHLD 398
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA LIR +P +P + +LL AC H N+ + +A L +++PE+P+ +++LSNIYA
Sbjct: 399 EAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIYA 458
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G G WE+V +R+++ +++ K+PG S
Sbjct: 459 GAGMWENVSMVRKLMAVKEVKKVPGYS 485
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 109/252 (43%), Gaps = 46/252 (18%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
+++H +K L+D Y KCG L A +F L ++ W T+++
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHV-AWATVLSAC 84
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
L+ KA + + HEG +PD ++S+I
Sbjct: 85 NLSNLPHKAFSISLPILHEGLQPDHFVFSSLI---------------------------- 116
Query: 149 KCVTSVLSACADLSA--LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
ACA+L + +KLGK+ H + + +D+ + ++L+ MY K P + R F
Sbjct: 117 -------KACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGRAVF 169
Query: 207 DQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
D FE+ W AMISGY R+G A+E+F +E N ++ A++S +G
Sbjct: 170 DSIFELSSIS---WTAMISGYARSGRKLEALELF----RESPFKNLYAWTALISGLVQSG 222
Query: 266 HVDKALQIFTMM 277
+ + AL +F M
Sbjct: 223 NANDALYLFVEM 234
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 19/201 (9%)
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
+ K+ H +I++ LN LI Y KCG A + FD + D W ++S
Sbjct: 26 IAKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDA--LPQQDHVAWATVLSA 83
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
+ A I + E ++P+ F +++ AC + G V +++ + F L P
Sbjct: 84 CNLSNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVH--VKLGKQLHARFLLSP 141
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL---GACWCHLNSDLGEEMAM 342
E D + +S +D + ELP+ +V+ S+ W + S
Sbjct: 142 FFE------DDVVKSSLVDMYAKF--ELPDYGRAVFDSIFELSSISWTAMISGYARS-GR 192
Query: 343 KLQEMEPENPTPFVILSNIYA 363
KL+ +E +PF N+YA
Sbjct: 193 KLEALELFRESPF---KNLYA 210
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 199/342 (58%), Gaps = 8/342 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++ + A +F+ + RNI +WNTMI G G +A + F+ +
Sbjct: 301 NAMIAGYVQTKKMDIARELFESMP-CRNISSWNTMITGYGQIGDIAQARKFFDMMPQR-- 357
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
D +W ++I+G++Q G EA +F +++ G + LS CAD++AL+LGK+
Sbjct: 358 --DCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQ 415
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG ++ + AL++MY KCG A F+ E K D WN M++GY R+
Sbjct: 416 IHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEK--DVVSWNTMLAGYARH 473
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G A+ +F+ M+ VKP+ + V VLSAC H G +D+ + F M D+G+ P +H
Sbjct: 474 GFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKH 533
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CM+DLLGR+GRL+EA++LIR +P +P + + +LLGA H N++LGE+ A + +ME
Sbjct: 534 YTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKME 593
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P+N +V+LSN+YA GRW D ++R + D + K+PG S
Sbjct: 594 PQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF +S CA + L+ G+Q+HG +K+ + +G AL+ MY KCG + A++ F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ ++ +++++WNTM+AG +G +A+ +FE + G KPD T ++S S G+
Sbjct: 453 EGIE-EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVL 155
+ F M + G++P+ K T ++
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMI 538
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 136/349 (38%), Gaps = 70/349 (20%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ YL+ A N+F ++ R++ +WN M+ G + N R A LF+ + +
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMP-ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEK-- 140
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQS------TGMVPSLKCVTSVLSACADLSA 163
D +WNS++SG++Q G EA ++F+ M G++ + + AC
Sbjct: 141 --DVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACL---- 194
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+ + + D L+ +++ + AR FD+ ++ D WN MI
Sbjct: 195 ----------LFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVR--DAISWNTMI 242
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY + G A +FD E + ++ A++S G+V
Sbjct: 243 SGYAQGGGLSQARRLFD----ESPTRDVFTWTAMVS-----GYV---------------- 277
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
++G LDEA+ E+PE Y++++ D+ E+
Sbjct: 278 ---------------QNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL--- 319
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+ M N + + + Y +G + M+ R I AG
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAG 368
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 28/275 (10%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D ++ Y++ L A +F +L +++++WN++++G NG ++A E+F+
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLF-DLMPEKDVVSWNSLLSGYAQNGYVDEAREVFD 166
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + + +WN +++ + G EA LFE ++ S C+ +
Sbjct: 167 NMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI-SWNCLMGGF-----VR 216
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
KLG + +D +IS Y + G S ARR FD+ + D W AM
Sbjct: 217 KKKLGDAR--WLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR--DVFTWTAM 272
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
+SGY +NG + A FD M ++ N S+ A+++ +D A ++F M
Sbjct: 273 VSGYVQNGMLDEAKTFFDEMPEK----NEVSYNAMIAGYVQTKKMDIARELFESM----- 323
Query: 283 LKPKQE--HFGCMVDLLGRSGRLDEARELIRELPE 315
P + + M+ G+ G + +AR+ +P+
Sbjct: 324 --PCRNISSWNTMITGYGQIGDIAQARKFFDMMPQ 356
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 54/238 (22%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
+IL WN I+ M NG + A+ +F + + ++N+MISG+ + A LF
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMP----RRSSVSYNAMISGYLRNSKFNLARNLF 103
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++M + +T + C +LG
Sbjct: 104 DQMPERDLFSWNVMLTGYVRNC------RLGD---------------------------- 129
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
ARR FD K D WN+++SGY +NG + A E+FD M ++ NS S+
Sbjct: 130 -----ARRLFDLMPEK--DVVSWNSLLSGYAQNGYVDEAREVFDNMPEK----NSISWNG 178
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+L+A H G +++A +F D+ L + C++ R +L +AR L ++P
Sbjct: 179 LLAAYVHNGRIEEACLLFE-SKSDWDLIS----WNCLMGGFVRKKKLGDARWLFDKMP 231
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+K D WN IS + RNG +SA+ +F+ M + +S S+ A++S +
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRR----SSVSYNAMISGYLRNSKFNL 98
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLG--RSGRLDEARELIRELPEPTVSVYHSLLGA 327
A +F M P+++ F V L G R+ RL +AR L +PE V ++SLL
Sbjct: 99 ARNLFDQM-------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSG 151
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+ + +E M +N + L Y GR E+
Sbjct: 152 ---YAQNGYVDEAREVFDNMPEKNSISWNGLLAAYVHNGRIEE 191
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 205/384 (53%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS TF V++AC LL L G+++H +K +T + L+ +Y CGC+ A +
Sbjct: 65 PNSYTFGFVLNACCKLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVM 124
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ +PD A+W++M+SG+SQ G
Sbjct: 125 FDEMP------------------------------------EPDSASWSTMVSGYSQNGQ 148
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E KL +MQ+ + + SV+ C DL L LGK H ++ + + D + TA
Sbjct: 149 AVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKEGVKIDVVLGTA 208
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + F + D W+ MI+GY +G E A+++FD M++ K+
Sbjct: 209 LVGMYSKCGSLDNALKVFQGMAER--DVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKII 266
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F +VLSA H+G V+K QIF M ++ + P+ +H+GCMVDL R+G + A +
Sbjct: 267 PNCVTFTSVLSAYSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHK 326
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+ +P EP V ++ +LLGAC H LGE ++ K+ +++P +P +V +SN+YA LGR
Sbjct: 327 FIQTMPIEPNVVLWRTLLGACKTHGYKGLGEHISRKILKLDPSSPENYVFVSNVYASLGR 386
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W V ++R ++ ++ K G S+
Sbjct: 387 WSSVCQVRSLMKEKAPKKQHGWSS 410
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 122/251 (48%), Gaps = 5/251 (1%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ WN++I G+S A L++ M G+ P+ VL+AC L L G+E
Sbjct: 30 PNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACCKLLRLCEGQEL 89
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H +++A L+ + + LI +Y CG +A FD E+ D A W+ M+SGY +NG
Sbjct: 90 HSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFD--EMPEPDSASWSTMVSGYSQNG 147
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ +++ MQ E V ++ + +V+ CG G +D + + +D + G+K
Sbjct: 148 QAVETLKLLREMQAENVSSDAFTLASVVGVCGDLGVLDLGKWVHSYIDKE-GVKIDVVLG 206
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEME 348
+V + + G LD A ++ + + E V+ + ++ H + + ++ AMK ++
Sbjct: 207 TALVGMYSKCGSLDNALKVFQGMAERDVTTWSIMIAGYAIHGHDEKALQLFDAMKRSKII 266
Query: 349 PENPTPFVILS 359
P T +LS
Sbjct: 267 PNCVTFTSVLS 277
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/393 (35%), Positives = 220/393 (55%), Gaps = 14/393 (3%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C PN +TF ++ C L G+ +H +K D + +L+ +Y+ G L
Sbjct: 119 CKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLS 178
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF E+ + +++TWN+M+ G + NG + AM+LF + + TWNS+I+G
Sbjct: 179 NARKVFDEMLVT-DVVTWNSMVIGCLRNGGLDMAMDLFRKMNGR----NIITWNSIITGL 233
Query: 124 SQLGMRFEAFKLFEKMQ--STGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+Q G E+ +LF +MQ S MV P + SVLSACA L A+ GK HG++ R +
Sbjct: 234 AQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIE 293
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF 239
D + TAL++MY KCG ++ F+ FE P+ D + W MIS + +G A F
Sbjct: 294 CDVVIGTALVNMYGKCGD---VQKAFEIFEEMPEKDASAWTVMISVFALHGLGWKAFNCF 350
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M++ VKPN +FV +LSAC H+G V++ F +M + ++P+ H+ CMVD+L R
Sbjct: 351 LEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSR 410
Query: 300 SGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
+ DE+ LIR +P +P V V+ +LLG C H N +LGE++ L ++EP N +V
Sbjct: 411 ARLFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNW 470
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQL-TKLPGIS 390
+IYA G ++ RIR ++ ++++ K+PG S
Sbjct: 471 CDIYAKAGMFDAAKRIRNIMKEKRIEKKIPGCS 503
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 129/307 (42%), Gaps = 56/307 (18%)
Query: 111 PDPATWNSMISGFSQL----GMRF-EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
PD +N MI + + F +A L+++M +VP+ +L C
Sbjct: 84 PDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGA 143
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G+ H VI+ KD +A +LIS+YM G S AR+ FD E+ D WN+M+ G
Sbjct: 144 TGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFD--EMLVTDVVTWNSMVIG 201
Query: 226 YGRNGEYESAVEIF----------------------------------DLMQQEKVKPNS 251
RNG + A+++F ++ + VKP+
Sbjct: 202 CLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDK 261
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ +VLSAC G +D + + + G++ +V++ G+ G + +A E+
Sbjct: 262 ITIASVLSACAQLGAIDHGKWVHGYLRRN-GIECDVVIGTALVNMYGKCGDVQKAFEIFE 320
Query: 312 ELPEPTVSVY------HSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI-YAG 364
E+PE S + +L G W N L E A ++P + T +LS ++G
Sbjct: 321 EMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKA----GVKPNHVTFVGLLSACAHSG 376
Query: 365 L---GRW 368
L GRW
Sbjct: 377 LVEQGRW 383
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T S++SAC+ L L+ G++VHG ++ + D + +++ +Y+ CG L +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F AME +WN++I+G+ Q G
Sbjct: 554 FD--------------------------AME----------DKSLVSWNTVITGYLQNGF 577
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F +M G+ + V AC+ L +L+LG+E H + ++ L D +A +
Sbjct: 578 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 637
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY K G + + + F+ +K A WNAMI GYG +G + A+++F+ MQ+
Sbjct: 638 LIDMYAKNGSITQSSKVFNG--LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC H+G + + L+ M FGLKP +H+ C++D+LGR+G+LD+A
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 309 LIRE--LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++ E E V ++ SLL +C H N ++GE++A KL E+EPE P +V+LSN+YAGLG
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WEDV ++RQ +N+ L K G S
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCS 839
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 154/373 (41%), Gaps = 75/373 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ VI ACA + + G VHGL +K D +G ALV Y
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY------------ 232
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
G+ +T A++LF+ + +WNSMI FS G
Sbjct: 233 -----GTHGFVT---------------DALQLFDIMPERNL----VSWNSMIRVFSDNGF 268
Query: 129 RFEAFKLF-EKMQSTG---MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E+F L E M+ G +P + + +VL CA + LGK HG ++ L+K+
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ AL+ MY KCG + A+ F K + WN M+ G+ G+ FD+++Q
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEGDTHGT---FDVLRQ 383
Query: 245 -----EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHF------G 291
E VK + + + + C H + K L +++ KQE
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL---------KQEFVYNELVAN 434
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD-----LGEEMAMKLQE 346
V + G L A+ + + TV+ +++L+G H S+ L + MK+
Sbjct: 435 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG---HAQSNDPRLSLDAHLQMKISG 491
Query: 347 MEPENPTPFVILS 359
+ P++ T +LS
Sbjct: 492 LLPDSFTVCSLLS 504
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 53/270 (19%)
Query: 7 DEPNSVTFISVISACASLLY-------LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLK 58
DE +S F+ V A LL ++ GR++H L + ++D ++ T ++ MY
Sbjct: 73 DESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAM 132
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
CG + VF L+ S+N+ WN +
Sbjct: 133 CGSPDDSRFVFDALR-SKNLFQWN-----------------------------------A 156
Query: 119 MISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+IS +S+ + E + F E + +T ++P V+ ACA +S + +G HG V++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAV 236
L +D + AL+S Y G + A + FD I P+ + WN+MI + NG E +
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFD---IMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 237 EIFDLMQQEK----VKPNSASFVAVLSACG 262
+ M +E P+ A+ V VL C
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCA 303
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 154 VLSACADLSALKLGKETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+L A +++G++ H V L D+ + T +I+MY CG P +R FD ++
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA--LR 147
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WNA+IS Y RN Y+ +E F +++ + P+ ++ V+ AC V L
Sbjct: 148 SKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 207
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ ++ GL +V G G + +A +L +PE + ++S++
Sbjct: 208 AVHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI-----R 261
Query: 332 LNSDLG--EEMAMKLQEMEPEN 351
+ SD G EE + L EM EN
Sbjct: 262 VFSDNGFSEESFLLLGEMMEEN 283
>gi|56201767|dbj|BAD73217.1| hypothetical protein [Oryza sativa Japonica Group]
gi|56201874|dbj|BAD73324.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125569384|gb|EAZ10899.1| hypothetical protein OsJ_00742 [Oryza sativa Japonica Group]
Length = 569
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 220/389 (56%), Gaps = 9/389 (2%)
Query: 8 EPNSVTFISVISAC--ASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPC 64
E N+ + +SAC A L L G+ +HG +K + +L+ MY K G +
Sbjct: 142 EGNAESMAVALSACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDD 201
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISG 122
A F++ ++N +TWNT+I +KA+++ + G P+ +W+++I G
Sbjct: 202 AKKAFRDAT-AKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGG 260
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+ G A +LF +MQ + P++ + +VLSAC DL AL+LG+E HGH ++A+L++
Sbjct: 261 FASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRH 320
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ LI+MY KCG+ S AR+ FD +K D WN+M++GYG +G + A+ +F M
Sbjct: 321 SLVENGLINMYAKCGKVSGARKVFDG--MKTRDLISWNSMLAGYGMHGLCDEALALFTDM 378
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V+P+ +FVAVLSACGHAG V + ++F M + P EH+ CMV LLGR+G
Sbjct: 379 AGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGL 438
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L +A EL+ +P P + V+ +LL +C H ++ + E + + E ++ ++++N+
Sbjct: 439 LRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNL 498
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W++ ++R M + L K PG S
Sbjct: 499 YAMCGMWDESKKVRVMTKEAGLRKNPGQS 527
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 18/305 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T + A AS + H L L + Q D + ++ Y + G A V
Sbjct: 9 PNSYTLPLALRAAASP-RVASAVHAHALHLGLHAQHD--VAGQILAAYSRLGRAADARRV 65
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R WN +I+ + A + F +A G +PD TW +++S ++ G
Sbjct: 66 FDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGARPDAVTWTALLSAHARSGK 125
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSAC---ADLSALKLGKETHG-HVIRADLNKDES 184
+ +LF +MQ +G + + + LSAC DL AL GK HG V++ ++
Sbjct: 126 HADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDL-ALAKGKAIHGCGVVKGLMHGYLF 184
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI MY K G+ A++ F K + WN +I+ Y + A+++ M+Q
Sbjct: 185 VTNSLICMYGKLGEMDDAKKAFRDATAK--NTVTWNTLITSYAAARLCDKALDVLAQMEQ 242
Query: 245 --EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLG 298
V PN S+ AV+ +G D+AL++F M + L P + VDLL
Sbjct: 243 IGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQW-LSPNVVTMATVLSACVDLLA 301
Query: 299 -RSGR 302
R GR
Sbjct: 302 LRLGR 306
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 202/384 (52%), Gaps = 52/384 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +++ F S ISACA + L GRQ+H + D IG ALV +Y +CG + A+
Sbjct: 536 KSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYA 595
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F ++ + D +WNS++SGF+Q G
Sbjct: 596 AFDQI------------------------------------YAKDNVSWNSLVSGFAQSG 619
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F +M G+ + S +SA A+++ +++GK+ HG + + + + ++
Sbjct: 620 YFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN 679
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI++Y KCG D WN+MI+GY ++G A+++F+ M+Q V
Sbjct: 680 ALITLYAKCGTI---------------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDV 724
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN +FV VLSAC H G VD+ + F M + L PK EH+ C+VDLLGRSG L A+
Sbjct: 725 LPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAK 784
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ E+P +P V+ +LL AC H N D+GE A L E+EP++ +V++SN+YA G
Sbjct: 785 RFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSG 844
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ R RQM+ DR + K PG S
Sbjct: 845 KWDCRDRTRQMMKDRGVKKEPGRS 868
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 61/352 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT S++SACAS+ L G+Q H +K SD ++ +L+D+Y+KC + AH
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408
Query: 68 VF------QELKGSRNILT----------------------------------------- 80
F L S I T
Sbjct: 409 FFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG 468
Query: 81 --WNTMIAGMMLN-----GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
+N ++ ++++ G+ + A+++F L + D +W +MI+G++Q EA
Sbjct: 469 FQFNVYVSSVLIDMYAKHGKLDHALKIFRRLK----ENDVVSWTAMIAGYTQHDKFTEAL 524
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF++MQ G+ S +SACA + AL G++ H + + D S+ AL+S+Y
Sbjct: 525 NLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLY 584
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+CG+ A FDQ I D WN+++SG+ ++G +E A+ IF M + ++ NS +
Sbjct: 585 ARCGKVREAYAAFDQ--IYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFT 642
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
F + +SA + +V QI M+ G + E ++ L + G +D+
Sbjct: 643 FGSAVSAAANIANVRIGKQIHGMIRKT-GYDSETEVSNALITLYAKCGTIDD 693
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 157/371 (42%), Gaps = 72/371 (19%)
Query: 14 FISVISACA-SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
F V+ C+ + + +F Q+H T+ +S T I L+D+Y K G L A VF+ L
Sbjct: 166 FAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENL 225
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELF--------------------------EGLAH 106
K +R+ ++W MI+G+ NG E+AM LF +G +
Sbjct: 226 K-ARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSS 284
Query: 107 EGF--------------------------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQ 140
E + + D ++NS+ISG +Q G A LF+KM
Sbjct: 285 ETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMN 344
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
P V S+LSACA + AL GK+ H + I+A + D + +L+ +Y+KC
Sbjct: 345 LDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIK 404
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A FF YG+ + +IF MQ E + PN ++ ++L
Sbjct: 405 TAHEFF-----------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKT 447
Query: 261 CGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV 320
C G D QI T + G + ++D+ + G+LD A ++ R L E V
Sbjct: 448 CTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVS 506
Query: 321 YHSLLGACWCH 331
+ +++ H
Sbjct: 507 WTAMIAGYTQH 517
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 168/421 (39%), Gaps = 80/421 (19%)
Query: 49 GTALVDMYLKCGCLPCAHNVFQELKGSRNILTW----NTMIA------------------ 86
G L+D YL G L CA NVF E+ R++ W NT IA
Sbjct: 100 GLKLIDFYLAFGDLNCAVNVFDEMP-IRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKN 158
Query: 87 --------GMMLNGRSEKAMEL-FEGLAH-----EGFKPDPATWNSMISGFSQLGMRFEA 132
++L G S A+ F H GF+ N +I + + G A
Sbjct: 159 VEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSA 218
Query: 133 FKLFEKMQSTGMVPSLKCVTS-----------------VLSACADLSALKLGKETHGHVI 175
K+FE +++ V + ++ VLSAC + + GK+ HG V+
Sbjct: 219 KKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVL 278
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + + + AL+++Y + G S A + F + D +N++ISG + G A
Sbjct: 279 KQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC--MSQRDRVSYNSLISGLAQQGYINRA 336
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM-----MDDDF--------- 281
+ +F M + KP+ + ++LSAC G + Q + M D
Sbjct: 337 LALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396
Query: 282 -----GLKPKQEHFGCM--VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
+K E F C +D L +S ++ ++ E P Y S+L C +
Sbjct: 397 YVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQI--EGIVPNQFTYPSILKTCTTLGAT 454
Query: 335 DLGEEMAMKLQEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAGI 393
DLGE++ ++ + + N +L ++YA G+ + +I + + + + + AG
Sbjct: 455 DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGY 514
Query: 394 T 394
T
Sbjct: 515 T 515
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 207/382 (54%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T S ++A A++ L G+++HG L+I D ++ +AL DMY KCG + A ++F
Sbjct: 221 NKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDMYGKCGSIGEARHIF 280
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ D +W +MI + + G R
Sbjct: 281 DKT------------------------------------VDRDVVSWTAMIDRYFKEGRR 304
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E F LF + +G+ P+ + VL+ACAD +A +LGK+ HG++ R + A+ L
Sbjct: 305 EEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTL 364
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG ARR F+ +PD + W ++ISGY +NG+ + A++ F+L+ + +P
Sbjct: 365 VHMYTKCGNIKNARRVFNGMP-RPDLVS-WTSLISGYAQNGQPDEALQFFELLLKSGTQP 422
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +FV VLSAC HAG VDK L+ F + + GL +H+ C++DLL RSGRL EA ++
Sbjct: 423 DHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDI 482
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I ++P EP ++ SLLG C H N L + A L E+EPENP + L+NIYA G W
Sbjct: 483 IDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLW 542
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
V +R++++ R + K PG+S
Sbjct: 543 GGVAEVRKVMDARGVVKKPGLS 564
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 156/323 (48%), Gaps = 15/323 (4%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D P++ T+ +++ C L L G +VH T +I ++DMY+KC L A
Sbjct: 85 DRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAK 144
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+ R++ +WN MI+G GR ++A +LF+ + D +W +M SG+ +
Sbjct: 145 RLFDEM-AERDLCSWNIMISGYAKAGRLQEARKLFDQMTER----DNFSWTAMTSGYVRH 199
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKC----VTSVLSACADLSALKLGKETHGHVIRADLNKD 182
EA +LF MQ + KC ++S L+A A + +L LGKE HGH++R L+ D
Sbjct: 200 DQHEEALELFRAMQRH---ENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLD 256
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +AL MY KCG AR FD+ + D W AMI Y + G E +F +
Sbjct: 257 GVVWSALSDMYGKCGSIGEARHIFDKTVDR--DVVSWTAMIDRYFKEGRREEGFALFSDL 314
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ + PN +F VL+AC + Q+ M G P +V + + G
Sbjct: 315 LKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYM-TRIGFDPSSFAASTLVHMYTKCGN 373
Query: 303 LDEARELIRELPEPTVSVYHSLL 325
+ AR + +P P + + SL+
Sbjct: 374 IKNARRVFNGMPRPDLVSWTSLI 396
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 115/244 (47%), Gaps = 12/244 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF V++ACA + G+QVHG +I + + LV MY KCG + A V
Sbjct: 321 PNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRV 380
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++++W ++I+G NG+ ++A++ FE L G +PD T+ ++S + G+
Sbjct: 381 FNGMPRP-DLVSWTSLISGYAQNGQPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGL 439
Query: 129 RFEAFKLFEKMQS----TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ + F+ ++ T C+ +LS L +E + + + D+
Sbjct: 440 VDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRL------QEAEDIIDKMPIEPDKF 493
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +L+ G A+R + FEI+P++PA + + + Y G + E+ +M
Sbjct: 494 LWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMD 553
Query: 244 QEKV 247
V
Sbjct: 554 ARGV 557
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 68/145 (46%), Gaps = 14/145 (9%)
Query: 8 EPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+P+ +TF+ V+SAC L Y ++ HGLT + + L+D+ + G
Sbjct: 421 QPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYA------CLIDLLSRSG 474
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A ++ ++ + W +++ G ++G + A E L E +PAT+ ++
Sbjct: 475 RLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEAL-FEIEPENPATYTTLA 533
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMV 145
+ ++ G+ ++ + M + G+V
Sbjct: 534 NIYATAGLWGGVAEVRKVMDARGVV 558
>gi|359481504|ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 216/389 (55%), Gaps = 12/389 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ +PN +F +VI + +L L GRQ+H +K+ +S+ +G+A+VD Y K +
Sbjct: 105 LNIKPNQFSFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINE 164
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F++ N++++ T+I G + R + A+ LF + + +WN+MISG+S
Sbjct: 165 AQKAFEDTH-EPNVVSYTTLIRGYLKKERFDDALALFRKMPER----NVVSWNAMISGYS 219
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q+G EA LF M G +P+ + +SA A+++AL +G+ HG ++ D
Sbjct: 220 QMGYNEEAVNLFVVMLREGTLPNERTFPCAISAVANIAALGMGRSFHGSAVKFLGKFDVF 279
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +L+S Y KCG + F+ K + WNA+I GY +G A+ F+ MQ
Sbjct: 280 IGNSLVSFYAKCGSMEESLLVFNTLPKK--NIVSWNALICGYANHGRGMEAIYFFEKMQD 337
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFT--MMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++PNS + + +L AC H+G VDK F +++ L P EH CMVDLL RSGR
Sbjct: 338 TGLRPNSVTLLGLLLACNHSGLVDKGYSYFNKARVEEPGLLTP--EHHACMVDLLSRSGR 395
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EA + + ELP P + + +LLG C H N +LGE A K+ ++PE+ + +V+LSN
Sbjct: 396 FKEAEKFLHELPFVPGIGFWKALLGGCRIHSNMELGELAARKILALDPEDVSSYVMLSNA 455
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ GRW+ V IR+ + ++++ +PG S
Sbjct: 456 HSAAGRWQSVSMIRKEMREKRMKGVPGSS 484
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 207/385 (53%), Gaps = 8/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S +F V+ A L + G+Q+H + S + T+LV MY C L A +
Sbjct: 125 PDSYSFPFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKL 184
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L WN M+AG G A LFE + + D +W ++ISG++Q
Sbjct: 185 FDGATFKHAPL-WNAMLAGYAKVGNMSNARNLFECMPEK--DRDVVSWTTLISGYTQTHS 241
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--LNKDESMA 186
EA LF M + P + +VLSACADL AL+LG+ H ++ + + L K +
Sbjct: 242 PNEAITLFRIMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLC 301
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY K G S AR+ F +K W +ISG +G + A+++F M++ +
Sbjct: 302 NSLIDMYAKSGDISKARQLFQN--MKHKTIITWTTVISGLALHGFGKEALDVFSCMEKAR 359
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN + +AVLSAC H G V+ IFT M +G++PK EH+GCM+DLLGR+G L EA
Sbjct: 360 VKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEA 419
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
EL+R +P E +V+ SLL A + ++ L E L +EP N + +LSN YA L
Sbjct: 420 MELVRVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSVLEPHNCGNYSLLSNTYAAL 479
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W++ +R+++ D K+PG+S
Sbjct: 480 GWWKEAAMVRKVMRDTCAEKVPGVS 504
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 41/287 (14%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P +N++I S A LF ++ GM P VL A LSA+ +GK+
Sbjct: 90 RPSIFFYNNVIWALSS-SNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQ 148
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--------------------- 208
H I + L+ S+ T+L+ MY C S AR+ FD
Sbjct: 149 IHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGN 208
Query: 209 -------FEIKPD---DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
FE P+ D W +ISGY + A+ +F +M + V+P+ + +AVL
Sbjct: 209 MSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVL 268
Query: 259 SACGHAGHVDKALQIFTMMDD-DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
SAC G + I ++ + L+ ++D+ +SG + +AR+L + + T
Sbjct: 269 SACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKT 328
Query: 318 VSVYHSLLGACWCHLNSDLGEEM-----AMKLQEMEPENPTPFVILS 359
+ + +++ H G+E M+ ++P T +LS
Sbjct: 329 IITWTTVISGLALH---GFGKEALDVFSCMEKARVKPNEVTLIAVLS 372
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 84/148 (56%), Gaps = 10/148 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGT-----ALVDMYLKCGCL 62
+P+ + ++V+SACA L LQ G +H IEK ++ + T +L+DMY K G +
Sbjct: 258 QPDEIAILAVLSACADLGALQLGEWIHNY---IEKHNNKLRKTVPLCNSLIDMYAKSGDI 314
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A +FQ +K + I+TW T+I+G+ L+G ++A+++F + KP+ T +++S
Sbjct: 315 SKARQLFQNMK-HKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSA 373
Query: 123 FSQLGMRFEAFKLFEKMQST-GMVPSLK 149
S +G+ +F M+S G+ P ++
Sbjct: 374 CSHVGLVELGRNIFTSMRSKYGIEPKIE 401
>gi|224088613|ref|XP_002308496.1| predicted protein [Populus trichocarpa]
gi|222854472|gb|EEE92019.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 207/365 (56%), Gaps = 10/365 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+VT +SV+ AC L FG +VH + + + D ++ AL+ +Y KCG L A
Sbjct: 223 KPNAVTVLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYARE 282
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ ++ +T+ +I+G M +G +K MELF + +TWN++ISG Q
Sbjct: 283 LFDEMS-EKDEVTYGAIISGYMAHGVVDKGMELFREMKSRVL----STWNAVISGLVQNN 337
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
L +MQ G P+ ++SVL + S LK GKE HG+ ++ +++ +AT
Sbjct: 338 RHEGVVDLVREMQGLGFRPNAVTLSSVLPTLSYFSNLKGGKEIHGYAVKNGYDRNIYVAT 397
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A+I Y K G A+ FDQ K W A+IS + +G+ SA+ FD M +
Sbjct: 398 AIIDTYAKLGFLFGAQYVFDQ--SKERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGI 455
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F AVL+AC H G VDKA +IF M +G++P EH+ CMV +LGR+GRL +A
Sbjct: 456 QPDHVTFTAVLAACAHCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRLSQAT 515
Query: 308 ELIRELP-EPTVSVYHSLL-GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E I +P EP V+ +LL GA C ++ +LG+ L E+EPEN + I++N+Y+
Sbjct: 516 EFISTMPIEPNAKVWGALLHGASLC-VDVELGKFACDHLFEIEPENTGNYAIMANLYSQA 574
Query: 366 GRWED 370
G+W++
Sbjct: 575 GKWKE 579
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 39/241 (16%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
G+++H L+ D + AL+ Y KC + A +F +++ R+++TWN+MIAG
Sbjct: 142 LGKEIHCFVLRRGLVEDVFVENALISFYSKCLGVGFARKLFDKMR-ERDVVTWNSMIAGY 200
Query: 89 MLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
G ++ EL+ + A GFKP+ T
Sbjct: 201 AQAGFFKECKELYREMGALPGFKPNAVT-------------------------------- 228
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
V SVL AC L G E H +++ + D + ALI +Y KCG +AR FD
Sbjct: 229 ---VLSVLQACMQSQDLVFGMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYARELFD 285
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
E+ D + A+ISGY +G + +E+F M+ + +A ++ H G V
Sbjct: 286 --EMSEKDEVTYGAIISGYMAHGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVV 343
Query: 268 D 268
D
Sbjct: 344 D 344
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 139/320 (43%), Gaps = 40/320 (12%)
Query: 30 GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM-IAGM 88
+Q+H L D +G L+++Y K + A +VF ++ +N ++N + IA
Sbjct: 36 AKQLHARLLLSSSTLDNYLGARLINLYSKTKHIHHARHVFDQIP-HKNTFSYNALLIAYT 94
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
M N E L P + S+
Sbjct: 95 MNNHHKETINLFSSLLLSSSGDLQPNNY------------------------------SI 124
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
C+ LS+ ++ + LGKE H V+R L +D + ALIS Y KC +AR+ FD+
Sbjct: 125 TCLLKSLSSLLMVTDVCLGKEIHCFVLRRGLVEDVFVENALISFYSKCLGVGFARKLFDK 184
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHV 267
++ D WN+MI+GY + G ++ E++ M KPN+ + ++VL AC + +
Sbjct: 185 --MRERDVVTWNSMIAGYAQAGFFKECKELYREMGALPGFKPNAVTVLSVLQACMQSQDL 242
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+++ + D+ K + + C ++ L + G LD AREL E+ E Y +++
Sbjct: 243 VFGMEVHRYIVDN---KVELDVLVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAII 299
Query: 326 GACWCHLNSDLGEEMAMKLQ 345
H D G E+ +++
Sbjct: 300 SGYMAHGVVDKGMELFREMK 319
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%), Gaps = 12/238 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN+VT SV+ + L+ G+++HG +K + + TA++D Y K G L
Sbjct: 352 LGFRPNAVTLSSVLPTLSYFSNLKGGKEIHGYAVKNGYDRNIYVATAIIDTYAKLGFLFG 411
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A VF + K R+++ W +I+ +G + A+ F+ + G +PD T+ ++++ +
Sbjct: 412 AQYVFDQSK-ERSLIIWTAIISAHAAHGDANSALTFFDEMLSNGIQPDHVTFTAVLAACA 470
Query: 125 QLGMRFEAFKLFEKM-QSTGMVP---SLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
GM +A+++F M + G+ P C+ VL LS + + +
Sbjct: 471 HCGMVDKAWEIFNSMSKKYGIQPLGEHYACMVGVLGRAGRLS------QATEFISTMPIE 524
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+ + AL+ C + D FEI+P++ + M + Y + G+++ A E
Sbjct: 525 PNAKVWGALLHGASLCVDVELGKFACDHLFEIEPENTGNYAIMANLYSQAGKWKEADE 582
>gi|356537359|ref|XP_003537195.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g13770, mitochondrial-like
[Glycine max]
Length = 600
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 213/386 (55%), Gaps = 42/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N TF ++ L +H L +K+ ++ +G++L+DMY K
Sbjct: 124 ESNEFTFATMPYFMYRFLGFCLREAIHSLIIKLNFKAHVYVGSSLLDMYAK--------- 174
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+G+ +A +FE L + D + ++ISG++QL
Sbjct: 175 -----------------------DGKIHEARGIFECLP----ERDVVSCTAIISGYAQLD 207
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E +LF ++Q GM + TSVL+A + L+AL GK+ H H++ +++ +
Sbjct: 208 LD-EELELFLRLQREGMXSNYVTYTSVLTALSGLAALDHGKQVHNHLLCSEVPSFVILQN 266
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-K 246
+LI MY KCG ++ARR FD ++ WNAM+ GY ++GE +E+F+LM+ E K
Sbjct: 267 SLIDMYSKCGNLTYARRIFDT--MRERTVISWNAMLVGYSKHGERREVLELFNLMRDENK 324
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+S + +AVLS C H G DK + IF M ++P + +GC+VDLLGR+GR++E
Sbjct: 325 VKPDSVTVLAVLSGCSHGGQEDKGMDIFYDMTSGKISVQPDTKRYGCVVDLLGRAGRVEE 384
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A E I+++P EP+ ++ LLGAC H N +GE + +L E EPEN +VILSN+YA
Sbjct: 385 AFEFIKKIPFEPSAAICGCLLGACSVHSNLGIGEFVGHRLLEFEPENAGNYVILSNLYAS 444
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
GRWEDV +R ++ + +TK PG S
Sbjct: 445 AGRWEDVTSLRNLMLKKAVTKEPGRS 470
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 20/257 (7%)
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+M G+ +L+ +VL+ C A K G+ H H I+ + T LI Y KC
Sbjct: 16 QMTLXGLDMNLQDYNTVLNECVSKRAFKEGQRVHAHTIKTHYLPCVYLWTRLIVFYTKCD 75
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
AR + E+ + W AMIS Y + G A+ I + + + N +F +
Sbjct: 76 SLGDARHVLN--EMPERNVVSWTAMISAYSQRGYASQALSILVQILRSGTESNEFTFATM 133
Query: 258 -------LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
L C + +A+ + K ++D+ + G++ EAR +
Sbjct: 134 PYFMYRFLGFC-----LREAIHSLII---KLNFKAHVYVGSSLLDMYAKDGKIHEARGIF 185
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
LPE V +++ + DL EE+ + L+ + +V +++ L
Sbjct: 186 ECLPERDVVSCTAIISG---YAQLDLDEELELFLRLQREGMXSNYVTYTSVLTALSGLAA 242
Query: 371 VGRIRQMINDRQLTKLP 387
+ +Q+ N +++P
Sbjct: 243 LDHGKQVHNHLLCSEVP 259
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 206/390 (52%), Gaps = 41/390 (10%)
Query: 5 LSDEPNS-VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
S P S TF SVI ACA L L+ G+++H + SD + AL+ +Y K +
Sbjct: 118 FSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMK 177
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF + + T+IA WNS+ISG+
Sbjct: 178 VAKKVF-------DAMPQRTIIA-----------------------------WNSLISGY 201
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
Q G+ E+ LF M +G P + S+LS+C+ L AL G H + + +
Sbjct: 202 DQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNV 261
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ T+LI+MY +CG S AR FD +K + W AMISGYG +G A+E+F M+
Sbjct: 262 VLGTSLINMYTRCGNVSKAREVFD--SMKERNVVTWTAMISGYGMHGYGRQAMELFTEMR 319
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+PN+ +FVAVLSAC H+G +D ++F+ M + +GL P EH CMVD+ GR+G L
Sbjct: 320 AYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLL 379
Query: 304 DEARELIREL--PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
++A + I++ EP +V+ S+LGAC H N DLG ++A + +EPENP +V+LSNI
Sbjct: 380 NDAYQFIKKFIPKEPGPAVWTSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNI 439
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA GR + V +R M+ R+L K G S
Sbjct: 440 YALAGRMDRVEMVRNMMTRRRLKKQVGYST 469
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 161/347 (46%), Gaps = 18/347 (5%)
Query: 34 HGLTLKIEKQSDTMIGTALVDMYLKCGCLP--CAHNVFQELKGSRNILTWNTMIAGMMLN 91
H +T + QS + + AL+ + L AH + L SR++LT +I+ +
Sbjct: 15 HPVTRNFDTQSHSPVHEALLRSGPRLRNLQQVHAHIIVSGLHRSRSLLT--KLISLVCTA 72
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G A LF + + PD ++S++ S+ G + + +M +G S
Sbjct: 73 GSITYARRLFPTVPN----PDSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTF 128
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
TSV+ ACADLSAL+LGKE H HV+ D + ALI++Y K A++ FD
Sbjct: 129 TSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQ 188
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WN++ISGY +NG + ++ +F LM + +P+SA+ V++LS+C G +D
Sbjct: 189 RT--IIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGC 246
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ D + G ++++ R G + +ARE+ + E V + +++ H
Sbjct: 247 WLHDYADGN-GFDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVTWTAMISGYGMH 305
Query: 332 LNSDLGEEMAMKLQEMEPENPTP----FVILSNIYAGLGRWEDVGRI 374
G + EM P P FV + + A G +D R+
Sbjct: 306 ---GYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRV 349
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/386 (36%), Positives = 210/386 (54%), Gaps = 12/386 (3%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
DEP +SV+SACA +Q G+ HGL ++ S + AL+ MY C + A
Sbjct: 265 DEP---LMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAAR 321
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + + +WN+MIAG + NG + AM LF + ++ D +W+++ISG Q
Sbjct: 322 RLFDSGE-CLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNK----DNVSWSTVISGCVQN 376
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+A +F+ MQ+ G+ P + SV+SAC +LSAL+ GK H ++ + +
Sbjct: 377 NQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLG 436
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ-QE 245
T+LI+MYMKCG A F+ E K WNA+I G NG ++++F M+ +
Sbjct: 437 TSLINMYMKCGCLEAALEAFNIMEEK--GTPCWNAVIVGLAMNGLVMKSLDMFSEMEASD 494
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
PN +F VLSAC HAG VD+ F +M + + P H+GCMVDLLGR+G + E
Sbjct: 495 TATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPNIRHYGCMVDLLGRAGYVKE 554
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A ++I+ +P P V + +LLGACW H ++GE + KL +P + +LSNIYA
Sbjct: 555 AEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRDPLHDGFQTMLSNIYAK 614
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G W+ V +R + R + K+ G S
Sbjct: 615 EGMWQSVDDLRGSMKQRHVQKVSGHS 640
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 140/306 (45%), Gaps = 35/306 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T + +ACAS + GRQVH + + + AL+ MY CGCL A V
Sbjct: 101 PDSYTHPILAAACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRV 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF--------------------EGLAHEG 108
F + + ++WNT++A + G ++A+E+F G+ E
Sbjct: 161 F-DAGPVWDAVSWNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEA 219
Query: 109 FK-------PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
+ D TW +MIS F + M EA +F M+ + SV+SACA
Sbjct: 220 RRVFDAAECRDIFTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQS 279
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
++ G+ HG VIRA L ++ ALI MY C ARR FD E D WN+
Sbjct: 280 EVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECL--DQYSWNS 337
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI+GY +NG + A+ +F M + ++ S+ V+S C AL +F M
Sbjct: 338 MIAGYLKNGHVKDAMALFSAMPNK----DNVSWSTVISGCVQNNQSSDALTVFDNMQAQ- 392
Query: 282 GLKPKQ 287
G++P +
Sbjct: 393 GIRPDE 398
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 58/154 (37%), Gaps = 42/154 (27%)
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
+ACA + G++ H H + + + ALI MY CG ARR FD + D
Sbjct: 111 AACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVW--D 168
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
WN +++ Y HAG VD+A+++F
Sbjct: 169 AVSWNTILAAYV-----------------------------------HAGDVDQAVEVFA 193
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
M K MV L GR G +DEAR +
Sbjct: 194 QMP-----KRNATAVSSMVSLFGRRGMVDEARRV 222
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +VIS CA+ L++G Q+H L + + + +++ +Y KCG L V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K F+ D TW+++I+ +SQ+G
Sbjct: 376 FCSMK-----------------------------------FR-DIITWSTIIAAYSQVGY 399
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+ +M+S G P+ + SVLS C ++ L+ GK+ H HV+ L + + +A
Sbjct: 400 GEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSA 459
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A + F + DD W AMISGY +G + A+E+F+ +Q+ ++
Sbjct: 460 LIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VL+AC HAG VD F M D+ + P +EH+GCM+DLL R+GRL +A
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAET 577
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P + V+ +LL AC H + D G+ A ++ +++P + L+NI+A G+
Sbjct: 578 LIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGK 637
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W++ IR ++ + + K PG S+
Sbjct: 638 WKEAANIRMLMKSKGVVKEPGWSS 661
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 175/410 (42%), Gaps = 72/410 (17%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ C L +G +HG ++K + +G+AL+DMY+K G + + VF E+ +RN
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP-TRN 181
Query: 78 ILTWNTMI----------------------------------------AGMMLNGRSEKA 97
+TW +I +G + +GRS
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 98 MELFEGLAHEGFKP--------------------------DPATWNSMISGFSQLGMRFE 131
L +G F D +W ++++ + Q+G
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ F++M+++ ++P+ ++V+S CA+ + LK G++ H HV+ S+A ++++
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
+Y KCG+ + + F + + D W+ +I+ Y + G E A E M+ E KPN
Sbjct: 362 LYSKCGELASVSKVFCSMKFR--DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNE 419
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ +VLS CG +++ Q+ + GL+ ++ + + G + EA ++
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHV-LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ + + + +++ H +S E+ +Q+ + P++ T +L+
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLT 528
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN SV+S C S+ L+ G+Q+H L + + +M+ +AL+ MY KCG + A
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +I++W MI+G +G S++A+ELFE + G +PD T+ +++ S G
Sbjct: 476 IFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534
Query: 128 MRFEAFKLFEKM 139
M F F M
Sbjct: 535 MVDLGFYYFNSM 546
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 14/237 (5%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+ A +LF+ L D +W ++ISG+ EA +LF KM+ + L+ +
Sbjct: 66 KDARDLFDQLPQR----DEVSWTNIISGYVNSSDSSEALRLFSKMR---LQSELRIDPFL 118
Query: 155 LSACADLSALKL----GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
LS L L G HG ++ L + +AL+ MYMK G+ + + FD E
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD--E 176
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ + W A+I+G R G E+ + F M + KV+ +S ++ L A +G ++
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
I T G + + + G+LD R++ V + +++ A
Sbjct: 237 RSIHTQTLKK-GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 227/418 (54%), Gaps = 40/418 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SVT +++SA A L+ G++V ++ +S+ ++ + VDMY KCG + A VF
Sbjct: 334 DSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVF 393
Query: 70 QE--------------------LKGSR--------------NILTWNTMIAGMMLNGRSE 95
L G N++TWN++I ++ NG+ +
Sbjct: 394 DSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRNGQVD 453
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A E+F + G P+ +W +M++G Q G EA KMQ +G+ P+ +T L
Sbjct: 454 EAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVAL 513
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMA--TALISMYMKCGQPSWARRFFDQFEIKP 213
SACA L++L G+ HG++IR +L S++ T+L+ MY KCG + A + F
Sbjct: 514 SACAHLASLNFGRSIHGYIIR-NLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLY-- 570
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
D+ +NAMIS Y G + A+ ++ ++ +KP+S +F ++LSAC HAG + +A+ I
Sbjct: 571 DELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAGDIVQAINI 630
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHL 332
FT M G+KP EH+G MVDLL SG ++A ELI+E+P +P + SL+ +
Sbjct: 631 FTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELIKEMPYKPDARMIQSLVASNNKQH 690
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++L + ++ +L E EPEN +V +SN +A G W++V ++R+M+ + L K PG S
Sbjct: 691 KTELVDYLSKQLLESEPENSGNYVTISNAFAIEGSWDEVVKMREMMKAKGLKKKPGCS 748
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 170/375 (45%), Gaps = 53/375 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +V AC +L + FGR VHG +K + ++L DMY KCG L A V
Sbjct: 131 PDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVLNDARKV 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ RN++ WN +++ G+ Q GM
Sbjct: 191 FDKIP-ERNVVAWN-----------------------------------ALMVGYVQNGM 214
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +L M+ G+ P+ V++ LSA A++ ++ GK++H I L D + T+
Sbjct: 215 NEEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTS 274
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+++ Y K G +A FD+ K D WN +ISGY + G + A+ + LM+ E ++
Sbjct: 275 ILNFYCKVGLVEYAEMIFDRMIEK--DVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLR 332
Query: 249 PNSASFVAVLSACG--HAGHVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+S + ++SA H + K +Q + + + + L VD+ + G +
Sbjct: 333 YDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTA------VDMYAKCGSI 386
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN-IY 362
+A+++ E + ++++LL A + +S L E +M+ E+ P +I N I
Sbjct: 387 VDAKKVFDSTVEKDLILWNTLLAA---YADSGLSGEALRLFYDMQLESVPPNMITWNSII 443
Query: 363 AGLGRWEDVGRIRQM 377
L R V ++M
Sbjct: 444 LSLLRNGQVDEAKEM 458
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 178/394 (45%), Gaps = 50/394 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+Q H + + + D ++GT++++ Y K G + A
Sbjct: 231 EPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEM 290
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D TWN +ISG+ Q G
Sbjct: 291 IFDRM------------------------------------IEKDVVTWNLLISGYVQQG 314
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A + + M+ + +++++SA A LKLGKE + IR + +A+
Sbjct: 315 LVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLAS 374
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY KCG A++ FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 375 TAVDMYAKCGSIVDAKKVFDSTVEK--DLILWNTLLAAYADSGLSGEALRLFYDMQLESV 432
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++ +++ + G VD+A ++F M G+ P + M++ L ++G +EA
Sbjct: 433 PPNMITWNSIILSLLRNGQVDEAKEMFLQMQSS-GIFPNLISWTTMMNGLVQNGCSEEAI 491
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNS-DLGEEM-AMKLQEMEPENPTPFVI-LSN 360
+R++ E P L AC HL S + G + ++ ++ + FV L +
Sbjct: 492 NFLRKMQESGLRPNSFSITVALSAC-AHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVD 550
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
+YA G D+ + + + +LP +A I+
Sbjct: 551 MYAKCG---DINQAEKAFGSKLYDELPLYNAMIS 581
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + I T L+ Y KC + A N+F L+
Sbjct: 36 ILQGCVYERDLCTGQQIHARILKNGDFYARNQYIETKLLIFYAKCDAIEVAQNLFSRLR- 94
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W +I G K ++G+ A
Sbjct: 95 VRNVFSWAAII----------------------GLK-------------CRIGLCEGALT 119
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M G++P V +V AC L G+ HG++++A L+ +A++L MY
Sbjct: 120 GFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYG 179
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG + AR+ FD+ I + WNA++ GY +NG E A+ + M++E ++P +
Sbjct: 180 KCGVLNDARKVFDK--IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTV 237
Query: 255 VAVLSACGHA-----GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LSA + G A+ I ++ D L +F C V L+
Sbjct: 238 STCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLV 285
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 15/247 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS + +SACA L L FGR +HG ++ ++ S T+LVDMY KCG + A
Sbjct: 504 PNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEK 563
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F K + +N MI+ L G ++A+ L+ L KPD T+ S++S S G
Sbjct: 564 AFGS-KLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAG 622
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+A +F +M S GM P L+ + +L++ + + AL+L KE D
Sbjct: 623 DIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELIKEM-------PYKPD 675
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +L++ K + Q E +P++ + + + + G ++ V++ ++
Sbjct: 676 ARMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTISNAFAIEGSWDEVVKMREM 735
Query: 242 MQQEKVK 248
M+ + +K
Sbjct: 736 MKAKGLK 742
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 102/243 (41%), Gaps = 20/243 (8%)
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD- 178
+S + G EA +L ++M+ + + +L C L G++ H +++
Sbjct: 2 VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61
Query: 179 -LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
+++ + T L+ Y KC A+ F + ++ + W A+I R G E A+
Sbjct: 62 FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVR--NVFSWAAIIGLKCRIGLCEGALT 119
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGC----- 292
F M + V P++ V ACG ALQ G K C
Sbjct: 120 GFVEMIENGVLPDNYVVPNVCKACG-------ALQWTWFGRGVHGYLVKAGLHDCVFVAS 172
Query: 293 -MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN 351
+ D+ G+ G L++AR++ ++PE V +++L+ ++ + + EE L +M E
Sbjct: 173 SLADMYGKCGVLNDARKVFDKIPERNVVAWNALMVG---YVQNGMNEEAIRLLSDMRKEG 229
Query: 352 PTP 354
P
Sbjct: 230 IEP 232
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 211/384 (54%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +S T ++SAC+S Q+ +Q+HG K+ ++ +A +D Y KC A
Sbjct: 302 QVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACK 361
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ELK +L N+MI GR A +FE + + +WNS+I G +Q
Sbjct: 362 LFSELKAYDTVLL-NSMITAYCNCGRIRDAKNIFETMPSKSL----ISWNSIIVGLAQNA 416
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F KM + + SV+SACA +S+L+LG++ I L D++++T
Sbjct: 417 YPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVST 476
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ Y KCG R+ FD IK D+ + WN+M+ GY NG + +F+ M+Q +
Sbjct: 477 SLVDFYCKCGFIENGRKLFDSM-IKTDEVS-WNSMLMGYATNGYGLETLTLFNEMKQAGL 534
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P +F VLSAC H G V++ + F +M D+ + P EH+ CMVDL R+G L EA
Sbjct: 535 RPTDITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEAL 594
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
L+ +P E S++ S+L C H + DLG+++A ++ ++ PE+ + +V LS I+A G
Sbjct: 595 NLVEHMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSG 654
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
WE +R+++ ++Q+ K PG S
Sbjct: 655 DWESSALVRKIMTEKQVKKHPGFS 678
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 64/363 (17%)
Query: 30 GRQVHGLTLKIEKQSDTM-IGTALVDMYLKCG-CLPCAHNVFQELKGSRNILTWNTMIAG 87
G+Q+H L LK + T+ + L+ MY +CG + AHN+F E+ RN +WNTMI G
Sbjct: 24 GKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNLFDEMP-ERNCFSWNTMIEG 82
Query: 88 MMLNGRSEKAMELFE---------------GLAHEG--------FKPDP----ATWNSMI 120
M G E++++LF+ G A G F P WNSMI
Sbjct: 83 YMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELDVAKKLFNEMPRRNGVAWNSMI 142
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA 177
G+++ G EA LF+++ S + S + SV+ ACADL A++ GK+ H ++
Sbjct: 143 HGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIGACADLGAIEYGKQVHARILMD 202
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFF------DQFEIKP------------------ 213
D+ D + ++LI++Y KCG A D F +
Sbjct: 203 DVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFSLSALIMGYANCGRMSDAVRIF 262
Query: 214 ---DDPAF--WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+P F WN++ISGY N E A + + M+ +V+ +S++ +LSAC G+
Sbjct: 263 RTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQ 322
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA- 327
A Q+ + GL +D + ++A +L EL + +S++ A
Sbjct: 323 YAKQMHGYV-CKVGLIDSVIVASAFIDAYSKCRNPNDACKLFSELKAYDTVLLNSMITAY 381
Query: 328 CWC 330
C C
Sbjct: 382 CNC 384
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 158/344 (45%), Gaps = 37/344 (10%)
Query: 13 TFI--SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
TF+ SVI ACA L +++G+QVH L + + D+++ ++L+++Y KCG L A+ V +
Sbjct: 173 TFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLK 232
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+ + + + +I G GR A+ +F ++ F WNS+ISG+
Sbjct: 233 MMDEVDD-FSLSALIMGYANCGRMSDAVRIFRTKSNPCF----VVWNSLISGYVNNHEEM 287
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+AF L +M++ + +T +LSAC+ + K+ HG+V + L +A+A I
Sbjct: 288 KAFALVNEMKNNRVQVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFI 347
Query: 191 SMYMKCGQPSWARRFFDQ----------------------------FEIKPDDPAF-WNA 221
Y KC P+ A + F + FE P WN+
Sbjct: 348 DAYSKCRNPNDACKLFSELKAYDTVLLNSMITAYCNCGRIRDAKNIFETMPSKSLISWNS 407
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+I G +N A+++F M + ++ + S +V+SAC ++ Q+F
Sbjct: 408 IIVGLAQNAYPLEALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIIT- 466
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL+ Q +VD + G ++ R+L + + ++S+L
Sbjct: 467 GLESDQAVSTSLVDFYCKCGFIENGRKLFDSMIKTDEVSWNSML 510
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 23/244 (9%)
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDESMATALISMYMKCGQP-SWARRF 205
L+ + +L + S++ GK+ H ++ L N S+A L+ MY +CG + A
Sbjct: 5 LRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDAHNL 64
Query: 206 FDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FD+ P+ F WN MI GY R G+ E ++++FDLM Q+ N S+ V+S A
Sbjct: 65 FDEM---PERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQK----NDYSWNVVISGFAKA 117
Query: 265 GHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS----- 319
G +D A ++F M G+ + M+ R+G EA L +EL +
Sbjct: 118 GELDVAKKLFNEMPRRNGVA-----WNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGD 172
Query: 320 --VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV-ILSNIYAGLGRWEDVGRIRQ 376
V S++GAC + G+++ ++ + E + + L N+YA G + + +
Sbjct: 173 TFVLASVIGACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLK 232
Query: 377 MIND 380
M+++
Sbjct: 233 MMDE 236
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 210/390 (53%), Gaps = 9/390 (2%)
Query: 5 LSD--EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
LSD EP+ V I +SAC+ L L+FGR +H L K Q + L+DMY KCG +
Sbjct: 227 LSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDI 286
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF + + WN +I G G + A LF+ + D T+NSMI+G
Sbjct: 287 AQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGAR----DVITFNSMITG 342
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ G +A +LF +++ GM V S+L+ACA L AL G+ H + + + +D
Sbjct: 343 YIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEED 402
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ TAL+ MYMKCG+ A F + + D W+AMI+G NG A+E F M
Sbjct: 403 VYLVTALVDMYMKCGRVDEATAVFHRMGER--DVHTWSAMIAGLAFNGMGMDALESFCQM 460
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+++ +P S +++AVL+AC H+ +++ Q F M L P+ EH+GCM+DLL RSG
Sbjct: 461 KRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGL 520
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
LDEA L++ +P +P ++ S+L AC H N DL A L ++ PE +V L NI
Sbjct: 521 LDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNI 580
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
Y +W + RIR ++ ++ + K G S+
Sbjct: 581 YIDSRQWVEAKRIRMLMEEQGVKKTAGYSS 610
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 163/387 (42%), Gaps = 47/387 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDT-MIGTALVDMYLKCGCLPCAHNV 68
++ TF V CA+ R +H L+ S ++ L+ MY G A
Sbjct: 101 SAFTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRA 160
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ ++ + W T+I G++ G ++A L + + + +W S+I+G+S+ G
Sbjct: 161 FDEVP-VKDAVVWATVIGGLVRWGLLDEARRLLV----QAPERNVVSWTSLIAGYSRAGR 215
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A F M S G+ P V LSAC+ L L+ G+ H V + + + +
Sbjct: 216 PADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVT 275
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A+ FD + P WN +I GY + G + A +FD M V
Sbjct: 276 LIDMYAKCGDIAQAQAVFDAVG-RGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDV- 333
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFT------MMDDDF------------GLKPKQEHF 290
+F ++++ H+G + ALQ+F M D+F G P+
Sbjct: 334 ---ITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRAL 390
Query: 291 ----------------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL-GACWCHLN 333
+VD+ + GR+DEA + + E V + +++ G + +
Sbjct: 391 HASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMG 450
Query: 334 SDLGEEMA-MKLQEMEPENPTPFVILS 359
D E MK +P + T +L+
Sbjct: 451 MDALESFCQMKRDGFQPTSVTYIAVLT 477
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 208/380 (54%), Gaps = 40/380 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
T + V+SAC++L L G++VH + I+ ++D +G AL+DMYLKC L A+ VF E
Sbjct: 214 TLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDE 273
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ +N++TW N+MISG + G E
Sbjct: 274 MP-VKNVVTW-----------------------------------NAMISGLAYQGRYRE 297
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A F MQ G+ P + VL++CA+L L++GK H ++ R + D+ + AL+
Sbjct: 298 ALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLD 357
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG A R F+ +K D + AMI G +GE A ++F M + ++PN
Sbjct: 358 MYAKCGSIDEAFRVFES--MKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNE 415
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ +L AC H G V + + F M D + L+P+ EH+GCM+DLLGR+G + EA E+I
Sbjct: 416 VTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIH 475
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
++ P V +LLGAC H N D+GE + KL E++P+ +++++N+Y+ + RW+D
Sbjct: 476 KMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKD 535
Query: 371 VGRIRQMINDRQLTKLPGIS 390
+IR+ + ++++ K PG S
Sbjct: 536 ALKIRKTMKNKKMRKTPGCS 555
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 146/325 (44%), Gaps = 39/325 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T V+ A A + ++ G+Q+H ++K M+G
Sbjct: 107 EPDGFTIPLVLKALALIQGIREGQQIHARSIK-----TGMVGF----------------- 144
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
N+ NT++ + G ++F+ H D +W ++I F++ G
Sbjct: 145 ---------NVYVSNTLMRLYSVCGSIHDVQKVFDECPHR----DLVSWTTLIQAFTKAG 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADLNKDESMA 186
+ A + F +M + + + VLSAC++L L LG++ H ++ D+ D +
Sbjct: 192 LYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVG 251
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY+KC + A + FD+ +K + WNAMISG G Y A++ F +MQ +
Sbjct: 252 NALLDMYLKCDDLNSAYKVFDEMPVK--NVVTWNAMISGLAYQGRYREALDTFRMMQDKG 309
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKP+ + V VL++C + G ++ + M + L K ++D+ + G +DEA
Sbjct: 310 VKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVG-NALLDMYAKCGSIDEA 368
Query: 307 RELIRELPEPTVSVYHSLLGACWCH 331
+ + V Y +++ H
Sbjct: 369 FRVFESMKRRDVYSYTAMIFGLALH 393
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 114/246 (46%), Gaps = 12/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT + V+++CA+L L+ G+ VH + +D +G AL+DMY KCG + A
Sbjct: 311 KPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFR 370
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ +K R++ ++ MI G+ L+G + A ++F + G +P+ T+ ++ S G
Sbjct: 371 VFESMK-RRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGG 429
Query: 128 MRFEAFKLF----EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E K F +K + C+ +L L KE + + ++ D
Sbjct: 430 LVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAG------LVKEAEEIIHKMEIRPDV 483
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
AL+ G + E+ PD+ + M + Y ++ A++I M
Sbjct: 484 FACGALLGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTM 543
Query: 243 QQEKVK 248
+ +K++
Sbjct: 544 KNKKMR 549
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 95/210 (45%), Gaps = 3/210 (1%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N++I S+ + + +M G+ P + VL A A + ++ G++ H I+
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 177 ADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
+ + ++ L+ +Y CG ++ FD E D W +I + + G Y A
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFD--ECPHRDLVSWTTLIQAFTKAGLYSRA 196
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
VE F M +++ + + V VLSAC + G ++ ++ + + +K ++D
Sbjct: 197 VEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLD 256
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + L+ A ++ E+P V +++++
Sbjct: 257 MYLKCDDLNSAYKVFDEMPVKNVVTWNAMI 286
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 218/384 (56%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT +SV+SACA + L G+ +HG+ +K+ + +L++MY K G L A
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQ 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+E+ R++++WN+M+ N G+++ G
Sbjct: 298 LFEEMP-VRSLVSWNSMVVIHNHN------------------------------GYAEKG 326
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
M LF M+ G+ P + ++L AC D + + H ++ R N D +AT
Sbjct: 327 M-----DLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIAT 381
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+++Y K G+ + + F+ EIK D W AM++GY + A+++FDLM +E V
Sbjct: 382 ALLNLYAKLGRLNASEDIFE--EIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGV 439
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ + +F +LSAC H+G V++ + F +M + + ++P+ +H+ CMVDLLGRSGRL++A
Sbjct: 440 EVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAY 499
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ +P EP+ V+ +LLGAC + N +LG+E+A +L ++P + +++LSNIY+ G
Sbjct: 500 ELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAG 559
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W ++R ++ +R+LT+ PG S
Sbjct: 560 LWRXASKVRXLMKERRLTRNPGCS 583
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 43/320 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ + IS+C S+ Y +H +K SD IG LV MY K G
Sbjct: 144 SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLG------------ 188
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
E A LF+ + + D +WNS++SG S G
Sbjct: 189 --------------------YDEDAQRLFDEMPNR----DLVSWNSLMSGLSGRGYLGAC 224
Query: 133 FKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
F +M++ +G P+ + SV+SACA + AL GK HG V++ ++ + +LI+
Sbjct: 225 LNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLIN 284
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY K G A + F++ ++ WN+M+ + NG E +++F+LM++ + P+
Sbjct: 285 MYGKLGFLDAASQLFEEMPVR--SLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 342
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A+ VA+L AC G +A I + G +++L + GRL+ + ++
Sbjct: 343 ATMVALLRACTDTGLGRQAESIHAYI-HRCGFNADIIIATALLNLYAKLGRLNASEDIFE 401
Query: 312 ELPEPTVSVYHSLLGACWCH 331
E+ + + ++L H
Sbjct: 402 EIKDRDTIAWTAMLAGYAVH 421
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 107/221 (48%), Gaps = 7/221 (3%)
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
V S++ A + +++ H VI++ D + L+SMY K G A+R FD E
Sbjct: 142 VQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFD--E 199
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-PNSASFVAVLSACGHAGHVDK 269
+ D WN+++SG G + + F M+ E + PN + ++V+SAC G +D+
Sbjct: 200 MPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDE 259
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
+ ++ G+ K + ++++ G+ G LD A +L E+P ++ ++S++
Sbjct: 260 GKSLHGVV-VKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHN 318
Query: 330 CHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIY-AGLGR 367
+ ++ G ++ MK + P+ T +L GLGR
Sbjct: 319 HNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGR 359
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +VIS CA+ L++G Q+H L + + + +++ +Y KCG L V
Sbjct: 316 PNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKV 375
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K F+ D TW+++I+ +SQ+G
Sbjct: 376 FCSMK-----------------------------------FR-DIITWSTIIAAYSQVGY 399
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+ +M+S G P+ + SVLS C ++ L+ GK+ H HV+ L + + +A
Sbjct: 400 GEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSA 459
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + A + F + DD W AMISGY +G + A+E+F+ +Q+ ++
Sbjct: 460 LIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VL+AC HAG VD F M D+ + P +EH+GCM+DLL R+GRL +A
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAET 577
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P + V+ +LL AC H + D G+ A ++ +++P + L+NI+A G+
Sbjct: 578 LIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGK 637
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W++ IR ++ + + K PG S+
Sbjct: 638 WKEAANIRMLMKSKGVVKEPGWSS 661
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 175/410 (42%), Gaps = 72/410 (17%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ C L +G +HG ++K + +G+AL+DMY+K G + + VF E+ +RN
Sbjct: 123 LKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMP-TRN 181
Query: 78 ILTWNTMI----------------------------------------AGMMLNGRSEKA 97
+TW +I +G + +GRS
Sbjct: 182 AVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHT 241
Query: 98 MELFEGLAHEGFKP--------------------------DPATWNSMISGFSQLGMRFE 131
L +G F D +W ++++ + Q+G
Sbjct: 242 QTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDC 301
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ F++M+++ ++P+ ++V+S CA+ + LK G++ H HV+ S+A ++++
Sbjct: 302 GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMT 361
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
+Y KCG+ + + F + + D W+ +I+ Y + G E A E M+ E KPN
Sbjct: 362 LYSKCGELASVSKVFCSMKFR--DIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNE 419
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+ +VLS CG +++ Q+ + GL+ ++ + + G + EA ++
Sbjct: 420 FALASVLSVCGSMAILEQGKQLHAHV-LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFM 478
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
+ + + + +++ H +S E+ +Q+ + P++ T +L+
Sbjct: 479 DSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLT 528
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 1/132 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN SV+S C S+ L+ G+Q+H L + + +M+ +AL+ MY KCG + A
Sbjct: 416 KPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASK 475
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +I++W MI+G +G S++A+ELFE + G +PD T+ +++ S G
Sbjct: 476 IFMD-SWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAG 534
Query: 128 MRFEAFKLFEKM 139
M F F M
Sbjct: 535 MVDLGFYYFNSM 546
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 102/237 (43%), Gaps = 14/237 (5%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
+ A +LF+ L D +W ++ISG+ EA +LF KM+ + L+ +
Sbjct: 66 KDARDLFDQLPQR----DEVSWTNIISGYVNSSDSSEALRLFSKMR---LQSELRIDPFL 118
Query: 155 LSACADLSALKL----GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
LS L L G HG ++ L + +AL+ MYMK G+ + + FD E
Sbjct: 119 LSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD--E 176
Query: 211 IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ + W A+I+G R G E+ + F M + KV+ +S ++ L A +G ++
Sbjct: 177 MPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHG 236
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
I T G + + + G+LD R++ V + +++ A
Sbjct: 237 RSIHTQTLKK-GFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTA 292
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 201/350 (57%), Gaps = 8/350 (2%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + ++D Y+K G + A N+F+++ RN+++W+TM++G G E A LF+
Sbjct: 217 ERDAVSWNTILDGYVKAGEMSQAFNLFEKMP-ERNVVSWSTMVSGYCKTGDMEMARMLFD 275
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + TW +ISGF++ G+ EA L+ +M++ G+ P + S+L+ACA+
Sbjct: 276 KMPFKNL----VTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESG 331
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
L LGK+ H + + + +++ AL+ MY KCG+ A F++ ++ D WN M
Sbjct: 332 LLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMR--DLVSWNCM 389
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
+ G +G E A+++F MQQE KP+ + +A+L AC HAG VD+ L F M+ D G
Sbjct: 390 LQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMERDHG 449
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ P EH+GCM+DLLGR GRL+EA L++ +P EP ++ +LLGAC H L E++
Sbjct: 450 IVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAEKVL 509
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+L +E +P + +LSNI+A G W V +R + + K G S+
Sbjct: 510 DRLITLEQSDPGNYSMLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASS 559
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 82/143 (57%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T IS+++ACA L G++VH KI + + ALVDMY KCG + A +
Sbjct: 314 KPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALS 373
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ R++++WN M+ G+ ++G EKA++LF + EGFKPD T +++ + G
Sbjct: 374 IFNEM-SMRDLVSWNCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAG 432
Query: 128 MRFEAFKLFEKMQST-GMVPSLK 149
+ F M+ G+VP ++
Sbjct: 433 FVDQGLSYFNSMERDHGIVPHIE 455
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 157/391 (40%), Gaps = 68/391 (17%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
++VH +K +D + L+ + C + A NVF +++ N+ +NT+I +
Sbjct: 40 KEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDP-NVHLYNTLIRAHVQ 98
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATW---------------------------------- 116
N +S KA F + G D T+
Sbjct: 99 NSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFV 158
Query: 117 -NSMISGFSQ---LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA------------CAD 160
NS+I +S+ LG+ + A KLF +M +V + ++ A A+
Sbjct: 159 PNSLIDSYSKCGLLGVNY-AMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAE 217
Query: 161 LSALKLGKETHGHVIRADL----NKDESMA-------TALISMYMKCGQPSWARRFFDQF 209
A+ G+V ++ N E M + ++S Y K G AR FD+
Sbjct: 218 RDAVSWNTILDGYVKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKM 277
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
K + W +ISG+ G + A +++ M+ +KP+ + +++L+AC +G +
Sbjct: 278 PFK--NLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVL 335
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
++ + +K +VD+ + GR+D+A + E+ + ++ +L
Sbjct: 336 GKKVHASI-KKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLA 394
Query: 330 CHLNSDLGEEMAMKLQE--MEPENPTPFVIL 358
H + + ++ K+Q+ +P+ T IL
Sbjct: 395 MHGHGEKAIQLFSKMQQEGFKPDKVTLIAIL 425
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
L C D + +K E H +I+ +L+ D +A LIS + C Q + A F+Q I+
Sbjct: 30 LHKCTDFNHIK---EVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQ--IQDP 84
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
+ +N +I + +N + A F MQ+ + ++ ++ +L AC G +
Sbjct: 85 NVHLYNTLIRAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWL------- 137
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
P + C V+ G G L +P + Y C L
Sbjct: 138 ----------PTVQMIHCHVEKYGFFGDL--------FVPNSLIDSYSK------CGL-- 171
Query: 335 DLGEEMAMKL-QEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIND 380
LG AMKL EM ++ V +++ GL + D+GR R++ ++
Sbjct: 172 -LGVNYAMKLFMEMGEKD---LVSWNSMIGGLVKAGDLGRARKLFDE 214
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 211/383 (55%), Gaps = 9/383 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ +SV++ACA +Q G HGL ++ S + L+ MY C + A +F
Sbjct: 268 DEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLF 327
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ S + +WN+MI+G + NGR E A LF+ + + D +W++MI+G
Sbjct: 328 DNGE-SLDHFSWNSMISGYLKNGRVEDAKALFDVMPDK----DNVSWSAMIAGCVHNNQS 382
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +F+ M++ + P + SV+SAC++LSAL+ GK H ++ + N + T+L
Sbjct: 383 SEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSL 442
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK- 248
I MYMKCG A FD E K WNA+I G NG ++++F M+
Sbjct: 443 IDMYMKCGCMEAALEVFDMLEEK--GTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAV 500
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F VLSAC H G V++ Q F +M + + + P H+GCMVDLLGR+G + EA +
Sbjct: 501 PNEITFTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAED 560
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I+ +P P V + +LLGACW H +S++GE + KL +++P++ +LSNIYA G
Sbjct: 561 MIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGM 620
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V +R + + + K+ G S
Sbjct: 621 WQCVKDLRGSMKQQHVAKVAGCS 643
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 34/296 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T + +ACA+ ++ G QVH ++K + + AL+ MY CGC+ A V
Sbjct: 104 PDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRV 163
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELF--------------------EGLAHEG 108
F + + ++WNT++A + +G E+A+++F G+ E
Sbjct: 164 F-DAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEA 222
Query: 109 F-------KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
D TW +M+S F + + EA +F M+ G + SV++ACA
Sbjct: 223 RGVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKS 282
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
++ G+ HG V+RA L ++ LI MY C ARR FD E D WN+
Sbjct: 283 GVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGE--SLDHFSWNS 340
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
MISGY +NG E A +FD+M + ++ S+ A+++ C H +AL +F M
Sbjct: 341 MISGYLKNGRVEDAKALFDVMPDK----DNVSWSAMIAGCVHNNQSSEALNVFDSM 392
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 120/246 (48%), Gaps = 13/246 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT +SVISAC++L L+ G+ VH K + ++GT+L+DMY+KCGC+ A
Sbjct: 398 KPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALE 457
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK-PDPATWNSMISGFSQL 126
VF L+ + WN +I G+ +NG +++++F + G P+ T+ ++S
Sbjct: 458 VFDMLE-EKGTPCWNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHG 516
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E + F+ MQ+ +VP+++ C+ +L + +E + ++ D
Sbjct: 517 GLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYV------REAEDMIQSMPMSPD 570
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
AL+ K G R + ++ PD F + + Y G ++ ++
Sbjct: 571 VPAWGALLGACWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGS 630
Query: 242 MQQEKV 247
M+Q+ V
Sbjct: 631 MKQQHV 636
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
SR +L + A +L +++LF GL P+ T N+++ + G F
Sbjct: 39 ASRLLLFTTSATAARLLPHPLHHSLQLF-GLVR---SPNAFTCNTLLKAALRQGFPHLCF 94
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
L+ M + P + +ACA ++ G + H H ++ + + + AL+ MY
Sbjct: 95 PLYASMPAA---PDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMY 151
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
CG + ARR FD + D WN +++ Y R+G+ E AV++F M +
Sbjct: 152 SACGCVASARRVFDAGPVW--DAVSWNTILATYVRDGDVEQAVKVFTRMPER 201
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 211/380 (55%), Gaps = 28/380 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN T S +S C +L L+ G QV+ L +K +S+ + +L+ +YLK GC+ AH
Sbjct: 266 KPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHR 325
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + +++TWN MIAG + MEL + S
Sbjct: 326 LFNRMDDA-SMVTWNAMIAG------HAQMMELTK------------------DNLSACH 360
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA KLF K+ +GM P L ++SVLS C+ + A++ G++ H I+ D ++T
Sbjct: 361 RGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVST 420
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LISMY KCG A + F E+ W +MI+G+ ++G + A+ IF+ M V
Sbjct: 421 SLISMYSKCGSIERASKAF--LEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGV 478
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN+ +FV VLSAC HAG V +AL F +M + +KP +H+ CMVD+ R GRL++A
Sbjct: 479 RPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQAL 538
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I+++ EP+ ++ + + C H N +LG A +L ++P++P +V+L N+Y
Sbjct: 539 NFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAE 598
Query: 367 RWEDVGRIRQMINDRQLTKL 386
R+EDV R+R+M+ + ++ KL
Sbjct: 599 RFEDVSRVRKMMEEEKVGKL 618
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 39/294 (13%)
Query: 33 VHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNG 92
VHG +K + + + LV++Y KCG + A VF + RN++ W T++ G + N
Sbjct: 89 VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML-RRNVVAWTTLMVGFVQNS 147
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
+ + A+ +F+ + + G PS+ ++
Sbjct: 148 QPKHAIHVFQEMLYAG-----------------------------------SYPSVYTLS 172
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+VL AC+ L +LKLG + H ++I+ ++ D S+ +AL S+Y KCG+ A + F + I+
Sbjct: 173 AVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSR--IR 230
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+ W + +S NG + +F M +KPN + + LS C ++ Q
Sbjct: 231 EKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQ 290
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
++++ FG + ++ L +SG + EA L + + ++ +++++
Sbjct: 291 VYSLC-IKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIA 343
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 17/182 (9%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L C D + + HGHV++ + + + + L+++Y KCG ARR FD +
Sbjct: 73 LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN--MLR 130
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ W ++ G+ +N + + A+ +F M P+ + AVL AC +LQ
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACS-------SLQS 183
Query: 274 FTMMDDDFGLKPKQEHF-------GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
+ D F + H + L + GRL++A + + E V + S +
Sbjct: 184 LK-LGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVS 242
Query: 327 AC 328
AC
Sbjct: 243 AC 244
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 201/378 (53%), Gaps = 9/378 (2%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+SV++ACA ++ G HGL ++ S I L+ MY C + A +F
Sbjct: 270 VSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDS-GD 328
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+ +WN+MIAG + NG E AM LF + + D +W++MISG Q A
Sbjct: 329 CLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDK----DNVSWSTMISGCVQNNQSSHALT 384
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+F+ M++ G+ P + SV+SAC +LSAL+ GK H +V + + T+LI MYM
Sbjct: 385 VFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYM 444
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK-PNSAS 253
KCG A F+ E K WNA+I G NG ++EIF M+ PN +
Sbjct: 445 KCGYLEAAMDVFNIMEEK--GAPCWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEIT 502
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
F VLSAC HAG V++ F +M + + P H+GCMVDLLGR+G + EA +LI +
Sbjct: 503 FTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESM 562
Query: 314 P-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVG 372
P P V + +LLGACW H +++GE + KL ++P + +LSNIYA G W+ V
Sbjct: 563 PMSPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVN 622
Query: 373 RIRQMINDRQLTKLPGIS 390
+R + R + K+ G S
Sbjct: 623 DLRDSMKQRHVPKVSGYS 640
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 139/310 (44%), Gaps = 35/310 (11%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L P++ T + +ACA+ + GRQV ++ D + AL+ MY CGCL
Sbjct: 97 LPASPDTYTHPILAAACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWD 156
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF----------------------- 101
A VF + + ++WNT++A + G ++A+ +F
Sbjct: 157 ARRVF-DAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGM 215
Query: 102 ----EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
G+ E D TW +MIS F + M EA +F M+ + SV++A
Sbjct: 216 VEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAA 275
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA ++ G+ HG VIRA L ++ LI MY C ARR FD + D
Sbjct: 276 CAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCL--DQF 333
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN+MI+GY +NG E+A+ +F M + ++ S+ ++S C AL +F M
Sbjct: 334 SWNSMIAGYLKNGHVENAMTLFSAMPDK----DNVSWSTMISGCVQNNQSSHALTVFDNM 389
Query: 278 DDDFGLKPKQ 287
G++P +
Sbjct: 390 RAQ-GVRPDE 398
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 17/260 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT +SVISAC +L L+ G+ VH + + ++GT+L+DMY+KCG L A +
Sbjct: 395 RPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMD 454
Query: 68 VFQ--ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFS 124
VF E KG+ WN +I G+ +NG K++E+F + A P+ T+ ++S
Sbjct: 455 VFNIMEEKGAP---CWNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEITFTGVLSACR 511
Query: 125 QLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ E F+ MQ +VP+++ C+ +L + KE + ++
Sbjct: 512 HAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYV------KEAEDLIESMPMS 565
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D AL+ K G+ R + + P F + + Y + G ++S ++
Sbjct: 566 PDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSVNDLR 625
Query: 240 DLMQQEKVKPNSASFVAVLS 259
D M+Q V S V +S
Sbjct: 626 DSMKQRHVPKVSGYSVVEMS 645
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 211/367 (57%), Gaps = 8/367 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF SV+SAC++L L+ G++VH LK ++ I + LVD+Y KC + A +V
Sbjct: 679 NEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVN 738
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
EL+ +N+ + +MI G G +A +LF+ L + + A W ++ G+ +L
Sbjct: 739 SELR-MQNVYSITSMIVGYSSQGNMAEARKLFDSLDEK----NSAVWTALFFGYVKLQQC 793
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
F+L + + VP + + S++ ACA +AL GK+ H +++RA + D + ++L
Sbjct: 794 EAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSL 853
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG +A R F E+ D +N MI+GY +G AV++F M + KP
Sbjct: 854 VDMYSKCGSIIYAERIFR--EVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKP 911
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ +FVA+LSAC H G V+ F M +D+ + P+ +H+ CM+DL GR+ +LD+A E
Sbjct: 912 DAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEF 971
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P + ++ + L AC + N++L + +L +E EN + +V L+N+YA G W
Sbjct: 972 MRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNW 1031
Query: 369 EDVGRIR 375
E++GRIR
Sbjct: 1032 EEMGRIR 1038
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 158/350 (45%), Gaps = 37/350 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T I++++ A L + +G+Q+H LK ++L+DMY KCG A V+
Sbjct: 548 TLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGC 607
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ ++ N M+A G + A++LF E + D WN+MISGF Q G E+
Sbjct: 608 GEVVDSVSRNAMVAACCREGEIDVALDLF---WKELEQNDVVAWNTMISGFVQNGYEEES 664
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
KLF +M + + SVLSAC++L +LKLGKE H +V++ L + + + L+ +
Sbjct: 665 LKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDV 724
Query: 193 YMKC-------------------------------GQPSWARRFFDQFEIKPDDPAFWNA 221
Y KC G + AR+ FD + K + A W A
Sbjct: 725 YCKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEK--NSAVWTA 782
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+ GY + + E+ E+ ++E P+ ++++ AC + QI + M
Sbjct: 783 LFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRA- 841
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
G+K + +VD+ + G + A + RE+ + +Y+ ++ H
Sbjct: 842 GIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHH 891
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMI 85
+L+ G H +K + L+ Y K G L A +F E+ RN+ +WN +I
Sbjct: 426 HLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMP-ERNVFSWNAII 484
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GMRFEAFKLFEKMQSTGM 144
A + + +A LF+ D T+NSM+SG+++ G + +A F +MQ+
Sbjct: 485 AAYVKSHNLRQARALFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPD 540
Query: 145 VPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
+ + T ++L+ A L + GK+ H +++ + A++LI MY KCG A
Sbjct: 541 MIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEA 600
Query: 203 RRFF-----------------------------DQF--EIKPDDPAFWNAMISGYGRNGE 231
R + D F E++ +D WN MISG+ +NG
Sbjct: 601 CRVYYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
E ++++F M EKV N +F +VLSAC +
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSN 692
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + IS+I ACA L G+Q+H L+ + DT + ++LVDMY KCG + A +
Sbjct: 810 PDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERI 869
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS-----GF 123
F+E+ +I+ +N MIAG +G +A++LF+ + GFKPD T+ +++S G
Sbjct: 870 FREVTDKDSII-YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGL 928
Query: 124 SQLGMRF 130
+LG F
Sbjct: 929 VELGEHF 935
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 201/378 (53%), Gaps = 39/378 (10%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSR---------------------------- 76
D TA+V Y++ G L A VF E+ R
Sbjct: 249 DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMP 308
Query: 77 --NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
NI +WN MI+G NG +A LF+ + D +W ++I+G++Q G+ EA
Sbjct: 309 FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQR----DSVSWAAIIAGYAQNGLYEEAMN 364
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ +M+ G + LSACAD++AL+LGK+ HG V+R K + AL+ MY
Sbjct: 365 MLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYC 424
Query: 195 KCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG A +D F+ ++ D WN M++GY R+G A+ +F+ M VKP+ +
Sbjct: 425 KCGCIDEA---YDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEIT 481
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
V VLSAC H G D+ + F M+ D+G+ P +H+ CM+DLLGR+G L+EA+ LIR +
Sbjct: 482 MVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNM 541
Query: 314 P-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVG 372
P EP + + +LLGA H N +LGE+ A + +MEP N +V+LSN+YA GRW DV
Sbjct: 542 PFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVS 601
Query: 373 RIRQMINDRQLTKLPGIS 390
++R + + K PG S
Sbjct: 602 KMRLKMRQIGVQKTPGYS 619
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF +SACA + L+ G+QVHG ++ + ++G ALV MY KCGC+ A++VF
Sbjct: 377 NRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVF 436
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q ++ ++I++WNTM+AG +G +A+ +FE + G KPD T ++S S G+
Sbjct: 437 QGVQ-HKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLT 495
Query: 130 FEAFKLFEKM-QSTGMVPSLK 149
+ F M + G+ P+ K
Sbjct: 496 DRGTEYFHSMNKDYGITPNSK 516
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 163/378 (43%), Gaps = 62/378 (16%)
Query: 31 RQVHGLTLKIEKQSD----------TMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILT 80
RQ+H +++ ++ T+ T + +++ G A VF + RN ++
Sbjct: 8 RQLHSSIFHVQRPTNYPKPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMP-LRNSVS 66
Query: 81 WNTMIAGMMLNGRSEKAMELFEGLAHEGF---------------------------KPDP 113
+N MI+G + N + A +LF+ + H+ + D
Sbjct: 67 YNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDV 126
Query: 114 ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
+WN+M+SG+ + G EA +F++M + +L+A L+ +
Sbjct: 127 VSWNAMLSGYVRSGHVDEARDVFDRMPHKNSIS----WNGLLAAYVRSGRLEEARR---- 178
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
+ + + + L+ Y+K AR+ FDQ ++ D WN MISGY ++G+
Sbjct: 179 LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVR--DLISWNTMISGYAQDGDLS 236
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A +F +E + ++ A++ A G +D+A ++F M + ++ + M
Sbjct: 237 QARRLF----EESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMP-----QKREMSYNVM 287
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE-NP 352
+ + R+D REL E+P P + ++ ++ +C N DL + A L +M P+ +
Sbjct: 288 IAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG-YCQ-NGDLAQ--ARNLFDMMPQRDS 343
Query: 353 TPFVILSNIYAGLGRWED 370
+ + YA G +E+
Sbjct: 344 VSWAAIIAGYAQNGLYEE 361
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 222/416 (53%), Gaps = 40/416 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT +++SA A L+FG++V ++ +D ++ + +DMY KCG + A VF
Sbjct: 356 VTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDS 415
Query: 72 --------------------LKGSR--------------NILTWNTMIAGMMLNGRSEKA 97
L G N++TWN +I ++ NG +A
Sbjct: 416 TVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEA 475
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
E+F + G P+ +W +M++G Q G EA KMQ +G+ P+ +T LSA
Sbjct: 476 KEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 535
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMA--TALISMYMKCGQPSWARRFFDQFEIKPDD 215
A+L++L G+ HG++IR +L S++ T+L+ MY KCG + A R F ++ +
Sbjct: 536 SANLASLHFGRSIHGYIIR-NLRHSSSVSIETSLVDMYAKCGDINKAERVFGS-KLYSEL 593
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
P +NAMIS Y G + A+ ++ ++ +KP+S +F ++LSAC HAG +D+A+ +FT
Sbjct: 594 P-LYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFT 652
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M G+ P EH+G MVDLL +G ++A LI E+P +P + SL+ +C +
Sbjct: 653 AMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASCNKQHKT 712
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E ++ L E EPEN +V +SN YA G W++V ++R+M+ + L K PG S
Sbjct: 713 ELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCS 768
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 178/383 (46%), Gaps = 55/383 (14%)
Query: 3 ECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
E L +E P++ +V AC +L + +FGR VHG +K + + ++L DMY KCG
Sbjct: 143 EMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCG 202
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF E+ RN++ WN +++
Sbjct: 203 VLDDARKVFDEIP-ERNVVAWN-----------------------------------ALM 226
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q GM EA +LF M+ G+ P+ V++ LSA A++ ++ GK++H I L
Sbjct: 227 VGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLE 286
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + T+L++ Y K G +A FD+ K D WN +ISGY + G E A+ +
Sbjct: 287 LDNILGTSLLNFYCKVGLIEYAEMVFDRMFDK--DVVTWNLLISGYVQQGLVEDAIYMSQ 344
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTM---MDDDFGLKPKQEHFGCMVD 295
LM+ EK+K + + ++SA ++ K +Q + + +D D L +D
Sbjct: 345 LMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTT------MD 398
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ + G + +A+++ E + ++++LL A + S L E EM+ E+ P
Sbjct: 399 MYAKCGSIVDAKKVFDSTVEKDLILWNTLLAA---YAQSGLSGEALRLFYEMQLESVPPN 455
Query: 356 VILSN-IYAGLGRWEDVGRIRQM 377
VI N I L R +V ++M
Sbjct: 456 VITWNLIILSLLRNGEVNEAKEM 478
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 43/310 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A+++ ++ G+Q H + + + D ++GT+L++ Y K G + A
Sbjct: 251 EPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEM 310
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + ++++TWN +I+G + G E A+ + SQL
Sbjct: 311 VFDRM-FDKDVVTWNLLISGYVQQGLVEDAIYM-----------------------SQL- 345
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESM 185
MR E K CVT +++SA A LK GKE + IR L+ D +
Sbjct: 346 MRLEKLK-------------YDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVL 392
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A+ + MY KCG A++ FD K D WN +++ Y ++G A+ +F MQ E
Sbjct: 393 ASTTMDMYAKCGSIVDAKKVFDSTVEK--DLILWNTLLAAYAQSGLSGEALRLFYEMQLE 450
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN ++ ++ + G V++A ++F M G+ P + M++ + ++G +E
Sbjct: 451 SVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNGMVQNGCSEE 509
Query: 306 ARELIRELPE 315
A +R++ E
Sbjct: 510 AILFLRKMQE 519
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 27 LQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTM 84
L G+Q+H LK + I T LV Y KC L A +F +L+ RN+ +W +
Sbjct: 66 LSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLR-VRNVFSWAAI 124
Query: 85 IAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
I G K ++G+ A F +M +
Sbjct: 125 I----------------------GVK-------------CRIGLCEGALMGFVEMLENEI 149
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
P V +V AC L + G+ HG+VI+A L +A++L MY KCG AR+
Sbjct: 150 FPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARK 209
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH- 263
FD EI + WNA++ GY +NG E A+ +F M++E V+P + LSA +
Sbjct: 210 VFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANM 267
Query: 264 ----AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
G A+ I ++ D L +F C V L+
Sbjct: 268 VGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLI 305
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 114/247 (46%), Gaps = 15/247 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+ + +SA A+L L FGR +HG ++ + S I T+LVDMY KCG + A
Sbjct: 524 PNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAER 583
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF K + +N MI+ L G ++A+ L+ L G KPD T+ S++S + G
Sbjct: 584 VFGS-KLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAG 642
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+A +F M GM P L+ V + SA A++L +E D
Sbjct: 643 DIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEM-------PYKPD 695
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
M +L++ K + E +P++ + + + Y G ++ V++ ++
Sbjct: 696 ARMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREM 755
Query: 242 MQQEKVK 248
M+ + +K
Sbjct: 756 MKAKGLK 762
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 102/260 (39%), Gaps = 28/260 (10%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+ P ++ +S + G EA L +M + L C L
Sbjct: 9 QALPPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLST 68
Query: 167 GKETHGHVIRAD--LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
GK+ H +++ ++E + T L+ Y KC A F + ++ + W A+I
Sbjct: 69 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVR--NVFSWAAIIG 126
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA----------GHVDKALQIF 274
R G E A+ F M + ++ P++ V ACG G+V KA
Sbjct: 127 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKA---- 182
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
GL+ + D+ G+ G LD+AR++ E+PE V +++L+ ++ +
Sbjct: 183 -------GLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVG---YVQN 232
Query: 335 DLGEEMAMKLQEMEPENPTP 354
+ EE +M E P
Sbjct: 233 GMNEEAIRLFSDMRKEGVEP 252
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 210/385 (54%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAH 66
E + VT +SV+ A A L + FGR VHG ++ + D +G+ALVDMY KCG A
Sbjct: 201 EVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAV 260
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ +RN+++W ++I+G+ Q
Sbjct: 261 KVFNEMP-TRNLVSWG-----------------------------------ALIAGYVQC 284
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA K+F++M G+ P+ VTS L+ACA L +L G+ H +V R+ L + +
Sbjct: 285 NRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG 344
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ MY KCG A F++ K P W AMI+G G+ S++ +F M + +
Sbjct: 345 TALVDMYSKCGCVDEALLVFEKLPAKDVYP--WTAMINGLAMRGDALSSLNLFSQMIRSR 402
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN +F+ VLSAC H G VD+ L++F +M D+ L+P +H+GCMVDLLGR+GRL+EA
Sbjct: 403 VQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEA 462
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I +P EPT V+ +L C H +LGE + L +++P + +++L+N+Y+
Sbjct: 463 IKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRC 522
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+WE +R+++ + + K P S
Sbjct: 523 QKWEAAANVRRLMKGKGVDKSPACS 547
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 12/306 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
N++++ G + + LF E K D +W ++I+G + G EA + F +M+S
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFI----ETAKKDVVSWTALINGCLRNGRAVEALECFVEMRS 197
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHG-HVIRADLNKDESMATALISMYMKCGQPS 200
+G+ V SVL A A L + G+ HG +V + D + +AL+ MY KCG
Sbjct: 198 SGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCD 257
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A + F+ E+ + W A+I+GY + Y+ A+++F M E ++PN ++ + L+A
Sbjct: 258 DAVKVFN--EMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTA 315
Query: 261 CGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C G +D+ + +D GL K +VD+ + G +DEA + +LP V
Sbjct: 316 CAQLGSLDQGRWLHEYVDRSKLGLNSKLG--TALVDMYSKCGCVDEALLVFEKLPAKDVY 373
Query: 320 VYHSLLGACWCHLN--SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQM 377
+ +++ + S L M ++P T +LS G E + R M
Sbjct: 374 PWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLM 433
Query: 378 INDRQL 383
I D +L
Sbjct: 434 ICDYRL 439
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 32/266 (12%)
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
LF+ LA P WN+++ FS + ++++ G++P +L A +
Sbjct: 60 LFDRLA----TPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFS 115
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
L + + + H+++ L+ D + +L+S + CG +RR F E D W
Sbjct: 116 KLRN-ENPFQFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF--IETAKKDVVSW 172
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG-----------HAGHVD 268
A+I+G RNG A+E F M+ V+ + + V+VL A H +V+
Sbjct: 173 TALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVE 232
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
I+ + +VD+ + G D+A ++ E+P + + +L+
Sbjct: 233 SGRVIWDVYVGS-----------ALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAG- 280
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTP 354
++ + +E QEM E P
Sbjct: 281 --YVQCNRYKEALKVFQEMIIEGIEP 304
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 201/384 (52%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF +V+ A A L G+ +HG+ +++ D TALV +Y C + A +
Sbjct: 87 PDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQL 146
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ + + TWN++I+G++
Sbjct: 147 FDEMP------------------------------------ERNAVTWNALITGYTHNRK 170
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A F M + G PS + V VLSAC+ L A GK H + L + + TA
Sbjct: 171 FVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTA 230
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + F+ EI+ + WN +ISGY NG+ ++A++ F M E K
Sbjct: 231 LIDMYAKCGAVYEVEKVFE--EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFK 288
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL AC H G V + F M FGL+P+ EH+GCMVDLLGR+G L+EA E
Sbjct: 289 PDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALE 348
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ + EP ++ +LL AC H N+ LGE + +L E+EP N +V+LSNIY+ R
Sbjct: 349 LIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERR 408
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W +VG++R M+N R + K+PG S+
Sbjct: 409 WAEVGKLRGMMNLRGIRKVPGCSS 432
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 9/259 (3%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
NSMI + L + +F M ++P +VL A A L +GK HG VI+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D +TAL+ +Y C S A + FD E+ + WNA+I+GY N ++ A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFD--EMPERNAVTWNALITGYTHNRKFVKAI 175
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+ F M + +P+ + V VLSAC H G ++ I + + L+ ++D+
Sbjct: 176 DAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHN-RLRLNVFVGTALIDM 234
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTP 354
+ G + E ++ E+ E V ++ L+ + D L M ++ +P+ T
Sbjct: 235 YAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTF 294
Query: 355 F-VILSNIYAGL---GRWE 369
V+ + + GL GRW+
Sbjct: 295 LGVLCACCHQGLVTEGRWQ 313
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T + V+SAC+ L G+ +H + + +GTAL+DMY KCG +
Sbjct: 187 QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E++ +N+ TWN +I+G +NG+ + A++ F + E FKPD T+ ++ G
Sbjct: 247 VFEEIR-EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQG 305
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVL 155
+ E F M Q G+ P ++ C+ +L
Sbjct: 306 LVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLL 337
>gi|110741623|dbj|BAE98759.1| hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 203/362 (56%), Gaps = 8/362 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R +H + +SD+ T L+ Y K G L CA VF E+ R++ WN MI G
Sbjct: 95 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITGYQR 153
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLK 149
G + AMELF+ + + + +W ++ISGFSQ G EA K+F M+ V P+
Sbjct: 154 RGDMKAAMELFDSMP----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 209
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
V SVL ACA+L L++G+ G+ + + A I MY KCG A+R F++
Sbjct: 210 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 269
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ WN+MI +G+++ A+ +F M +E KP++ +FV +L AC H G V K
Sbjct: 270 G-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 328
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGAC 328
++F M++ + PK EH+GCM+DLLGR G+L EA +LI+ +P +P V+ +LLGAC
Sbjct: 329 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 388
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPG 388
H N ++ E + L ++EP NP VI+SNIYA +W+ V R+R+++ +TK G
Sbjct: 389 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAG 448
Query: 389 IS 390
S
Sbjct: 449 YS 450
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 26/314 (8%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S +PN +T +SV+ ACA+L L+ GR++ G + + + A ++MY KCG
Sbjct: 198 MEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCG 257
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A +F+EL RN+ +WN+MI + +G+ ++A+ LF + EG KPD T+ ++
Sbjct: 258 MIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL 317
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIR 176
GM + +LF+ M+ + P L+ C+ +L L +E + +
Sbjct: 318 LACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL------QEAYDLIKT 371
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D + L+ G A + F+++P +P M + Y N +++
Sbjct: 372 MPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGV 431
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCM 293
+ + LM++E + A G++ V+ + + FT+ D P+ +
Sbjct: 432 LRMRKLMKKE----------TMTKAAGYSYFVEVGVDVHKFTVEDKS---HPRSYEIYQV 478
Query: 294 VDLLGRSGRLDEAR 307
++ + R +L+++R
Sbjct: 479 LEEIFRRMKLEKSR 492
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N +I + E+ L+ + G+ PS + +A A S+ + + H
Sbjct: 43 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 102
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
R+ D T LI+ Y K G ARR FD E+ D WNAMI+GY R G+ ++A
Sbjct: 103 RSGFESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDVPVWNAMITGYQRRGDMKAA 160
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+E+FD M ++ N S+ V+S G+ +AL++F M+ D +KP ++
Sbjct: 161 MELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 216
Query: 296 LLGRSGRLDEAREL 309
G L+ R L
Sbjct: 217 ACANLGELEIGRRL 230
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 142/306 (46%), Gaps = 13/306 (4%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + S L +N +I ++ + +++ L+ L+ +G +P T+N + + +
Sbjct: 28 ARKLFDHHQNSCTFL-YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA 86
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L + +G C T++++A A L AL + + + +D
Sbjct: 87 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVP 142
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ A+I+ Y + G A FD K + W +ISG+ +NG Y A+++F M++
Sbjct: 143 VWNAMITGYQRRGDMKAAMELFDSMPRK--NVTSWTTVISGFSQNGNYSEALKMFLCMEK 200
Query: 245 EK-VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+K VKPN + V+VL AC + G ++ ++ ++ G +++ + G +
Sbjct: 201 DKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN-GFFDNIYVCNATIEMYSKCGMI 259
Query: 304 DEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFV--ILS 359
D A+ L EL + + ++S++G+ H D + A L+E E + FV +L+
Sbjct: 260 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 319
Query: 360 NIYAGL 365
++ G+
Sbjct: 320 CVHGGM 325
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 215/426 (50%), Gaps = 46/426 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N T S+I+A L L G+ VHG +K + + + T +DMY+KCG A
Sbjct: 1315 ESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARM 1374
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE------------------------- 102
++ EL + ++++W MI G + + LF
Sbjct: 1375 IYDELP-TIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSALLQVFFQRVRFLN 1433
Query: 103 ----------------GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
+ H + D TWNSMISG++Q G ++A +LF +M+S + P
Sbjct: 1434 ALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAP 1493
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDESMATALISMYMKCGQPSWARRF 205
+ S LSA A L A+++G H + ++ L + + + TAL++ Y KCG AR
Sbjct: 1494 DAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMV 1553
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
FD +K + W+AMI GYG G+ ++ IF M +E +KPN F VLSAC ++G
Sbjct: 1554 FDSMGVK--NIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSG 1611
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSL 324
V++ + F M D+ P +H+ CMVDLL RSG+LDEA + I+++P + VS+Y +
Sbjct: 1612 MVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAF 1671
Query: 325 LGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
L C + DLGE + ++ ++ +V++SN+YA G+W V +R ++ R L
Sbjct: 1672 LHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLN 1731
Query: 385 KLPGIS 390
K+PG S
Sbjct: 1732 KVPGYS 1737
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 115/245 (46%), Gaps = 39/245 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E +++ F ++ AC+ L + GR+VH +K+ D+ + T L+DMY KCG + C+
Sbjct: 1215 ECDNIIFSIILKACSELREIVEGRKVHCQIVKV-GGPDSFVMTGLIDMYGKCGQVECSSA 1273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E+ +N+++W +MIAG + N +E+ + LF + + +P T S+I+ F++
Sbjct: 1274 VFEEIM-DKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTK-- 1330
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
L AL GK HG+ I+ +AT
Sbjct: 1331 ---------------------------------LRALHQGKWVHGYAIKNIAELSSFLAT 1357
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY+KCGQ AR +D E+ D W MI GY + + + +F + +
Sbjct: 1358 TFLDMYVKCGQTRDARMIYD--ELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDL 1415
Query: 248 KPNSA 252
PNSA
Sbjct: 1416 LPNSA 1420
>gi|147772248|emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
Length = 538
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 218/370 (58%), Gaps = 9/370 (2%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
ACA+L + + G Q+H LTLK+ + + T L+++Y CG A VF E+ RN +
Sbjct: 99 ACANLQHREGGLQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEMP-VRNSV 157
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
TWN I G+ G + L L E P +W ++I G++++ +A LF M
Sbjct: 158 TWNVFITGLAKWGE----LHLARSLLDEMPMPTVVSWTTIIDGYTRMNQPKQALALFLTM 213
Query: 140 -QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN-KDESMATALISMYMKCG 197
G+ P+ + ++ A ++L AL++ + H + ++ LN D + T+L+ Y KCG
Sbjct: 214 FLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRIRTSLLDTYAKCG 273
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
A R F + + K + W ++IS + +G + A+E F+ MQ+E +KPN +F++V
Sbjct: 274 CIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMAKEALENFERMQKECLKPNRITFLSV 333
Query: 258 LSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
L+AC H G V++ L+ FT M + + + P +H+GC++D+LGR+GRLDEA ++ E+P
Sbjct: 334 LNACSHGGLVEEGLKFFTKMVNKYQISPDVKHYGCLIDMLGRAGRLDEAEKMALEIPNYV 393
Query: 318 VSV--YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIR 375
V+V + +LLGAC H N ++G + K+ EME + +V+LSNI+AG+GR+ DV R+R
Sbjct: 394 VNVVIWRTLLGACSFHGNVEMGARVTRKILEMEKKYGGDYVLLSNIFAGVGRFWDVERVR 453
Query: 376 QMINDRQLTK 385
+++++R +K
Sbjct: 454 RLMDERNASK 463
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 10/180 (5%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADLSALKLG 167
D +WN ++ +S EAF LF ++ + P + +L ACA+L + G
Sbjct: 50 DVTSWNVLLRHYSLGIFPQEAFLLFRHLRLHHVYPPLSFDSFSFSFLLKACANLQHREGG 109
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ H ++ + T L+++Y CG A++ FD+ ++ + WN I+G
Sbjct: 110 LQLHALTLKLGFEFHVYVHTVLLNVYAACGAFLEAKQVFDEMPVR--NSVTWNVFITGLA 167
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+ GE A + D M P S+ ++ +AL +F M D G+KP +
Sbjct: 168 KWGELHLARSLLDEMPM----PTVVSWTTIIDGYTRMNQPKQALALFLTMFLDEGIKPTE 223
>gi|302801784|ref|XP_002982648.1| hypothetical protein SELMODRAFT_51938 [Selaginella moellendorffii]
gi|300149747|gb|EFJ16401.1| hypothetical protein SELMODRAFT_51938 [Selaginella moellendorffii]
Length = 481
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 203/357 (56%), Gaps = 8/357 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ N VT++S++ AC+ L L G+ +H D ++ +A+V+MY KC L A
Sbjct: 132 KQNRVTYLSLLDACSELESLTDGQALHARITATGYVGDAVLDSAVVNMYTKCKSLERARR 191
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRS-EKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ + +TW T+I+ G+ E A E+F+ + TWN++++ + Q
Sbjct: 192 VFDRMQ-LKTEVTWTTLISAYAQQGQDLENAREVFDRMTTRTV----VTWNTLLTAYGQH 246
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA +L+++M+ G+ P +++ AC D+ +L G+ H ++RA L ++
Sbjct: 247 GHSEEAIRLYQRMEPDGVEPDEITYVTIVGACGDMQSLAEGRPVHDRIVRAGLENGALVS 306
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+SMY KCG AR+ FD ++ + WNAMI Y +NGE + +E+++LM
Sbjct: 307 TALVSMYGKCGSLDEARKIFDGSDLS--NLVSWNAMIVAYAQNGEGKQGLELYELMNLGG 364
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+PN ++ VL AC HAG +D+A + F + D G++ + EHF CM D+LGR GRL+EA
Sbjct: 365 VEPNGVTYTGVLFACAHAGLLDEAWKQFVSLKTDRGIEWEDEHFSCMTDMLGRLGRLEEA 424
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
E ++ P+ + SLL +C H + + G+ ++ + + PE + +V+LSNIYA
Sbjct: 425 EEFLKRFPQAGGVPWLSLLNSCQMHGDLERGKRVSQEAMKRNPETSSSYVMLSNIYA 481
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 152/300 (50%), Gaps = 21/300 (7%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ C L+ GR+VH K + +T +G LV+MY KCG A F++++ +
Sbjct: 1 LVRRCRDRQALEEGRRVHEQIRKNGFEGETFLGNLLVEMYAKCGSWEDARQAFEKIE-HK 59
Query: 77 NILTWNTM-----IAGMMLNGRSE---KAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
N ++ T A + + G+S +A ++F+ L+ TWN+++ ++Q G
Sbjct: 60 NAFSFGTNQPVLGTAIVTMYGKSGNLVEASQVFDRLSSRNI----ITWNTLMGAYAQYGH 115
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E +L ++M+ G+ + S+L AC++L +L G+ H + D + +A
Sbjct: 116 PDEVLRLQKRMELEGVKQNRVTYLSLLDACSELESLTDGQALHARITATGYVGDAVLDSA 175
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE-YESAVEIFDLMQQEKV 247
+++MY KC ARR FD+ ++K + W +IS Y + G+ E+A E+FD M V
Sbjct: 176 VVNMYTKCKSLERARRVFDRMQLKTE--VTWTTLISAYAQQGQDLENAREVFDRMTTRTV 233
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
++ +L+A G GH ++A++++ M+ D G++P + + +V G L E R
Sbjct: 234 ----VTWNTLLTAYGQHGHSEEAIRLYQRMEPD-GVEPDEITYVTIVGACGDMQSLAEGR 288
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 213/385 (55%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P++ T ++ AC L + G QVHG+T++ +D + T L+ +Y + GCL H
Sbjct: 113 KPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHK 172
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + + M+ G A +LFEG+ + DP WN+MISG++Q+G
Sbjct: 173 VFNSVSYP-DFVCRTAMVTACARCGDVAFARKLFEGMP----EKDPIAWNAMISGYAQVG 227
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF MQ G+ + + SVLSAC L AL G+ H ++ R + + T
Sbjct: 228 ESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGT 287
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ +Y KCG A F E K + W++ ++G NG E +++F LM+Q+ V
Sbjct: 288 TLVDLYAKCGDMDKAMEVFWGMEEK--NVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGV 345
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +FV+VL C G VD+ + F M ++FG++P+ +H+GC+VDL R+GRL++A
Sbjct: 346 TPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAV 405
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I+++P + +V+ SLL A + N +LG + K+ E+E N +V+LSNIYA
Sbjct: 406 SIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSD 465
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W++V +RQ + + + K PG S
Sbjct: 466 DWDNVSHVRQSMKSKGVRKQPGCSV 490
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 198/391 (50%), Gaps = 39/391 (9%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ + PN VTF+S+ISAC + G +HGL +K + + AL+++Y K G
Sbjct: 627 MRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTG 686
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L + +F++L +N+++W N+MI
Sbjct: 687 DLISSCKLFEDL-SVKNLVSW-----------------------------------NTMI 710
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
Q G+ E F + G+ P +VL C D+ ++L + HG ++ N
Sbjct: 711 VIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFN 770
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ + TAL+ +Y K G+ + F EI D W AM++ Y +G A++ F+
Sbjct: 771 ANTCITTALLDLYAKLGRLEDSSTVF--LEITSPDSMAWTAMLAAYATHGYGRDAIKHFE 828
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
LM + P+ +F +L+AC H+G V++ F M + ++P+ +H+ CMVDL+GRS
Sbjct: 829 LMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRS 888
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L +A LI+E+P EP+ V+ +LLGAC + ++ LG + A +L E+EP + +++LS
Sbjct: 889 GLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLS 948
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIY+ G W+D RIR ++ + L + G S
Sbjct: 949 NIYSASGLWKDASRIRNLMKQKGLVRASGYS 979
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 116/251 (46%), Gaps = 9/251 (3%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGL--AHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+ N+MI + EK+ + + + + G KPD T N ++ + LGMR +
Sbjct: 78 TLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQ 137
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ G T ++S A+L L + V D TA+++
Sbjct: 138 VHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDF----VCRTAMVTACA 193
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+CG ++AR+ F+ K DP WNAMISGY + GE A+ +F LMQ E VK N S
Sbjct: 194 RCGDVAFARKLFEGMPEK--DPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSM 251
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
++VLSAC G +D+ + ++ + +K +VDL + G +D+A E+ +
Sbjct: 252 ISVLSACTQLGALDQGRWAHSYIERN-KIKITVRLGTTLVDLYAKCGDMDKAMEVFWGME 310
Query: 315 EPTVSVYHSLL 325
E V + S L
Sbjct: 311 EKNVYTWSSAL 321
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT I+V+SACA L L+ GR +H L + + + AL+DMY KCG A V
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQV 296
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L +WN +I G +G + A LF+ E D T+NSM++G+ G
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFD----EMEVRDIITFNSMMTGYIHSGQ 352
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF M+ + V ++L+ACA L AL+ G+ H + + + D + TA
Sbjct: 353 LREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTA 412
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MYMKCG+ A F + + D W AMI+G NG ++A+E F M+ + +
Sbjct: 413 LLDMYMKCGRVDEATIVFQRMGKR--DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS S++AVL+AC H+ +++ F M + + P+ EH+GCM+DLLGRSG LDEA +
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 530
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++ +P +P ++ S+L AC H + DL + A L ++EP+ +V L NIY +
Sbjct: 531 LVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQ 590
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WE+ +IR ++ +RQ+ K G S+
Sbjct: 591 WENASKIRMLMEERQVKKTAGYSS 614
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 48 IGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
+ +L+ MY++ G A F E+ ++ + W +I+G+ G L +
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIH-VKDAVAWTMLISGLAKMGMLCDTQLLLS----Q 198
Query: 108 GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
D +W S+I+ +S+ EA F+ M S G+ P V +VLSACA L L+LG
Sbjct: 199 APVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELG 258
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ H V + E++ ALI MY KCG A++ FD P P WNA+I GY
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP-RPQSWNAIIDGYC 317
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
++G + A +FD M+ + +F ++++ H+G + +AL +F M
Sbjct: 318 KHGHVDVARSLFDEMEVRDI----ITFNSMMTGYIHSGQLREALLLFMSM 363
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 108/302 (35%), Gaps = 84/302 (27%)
Query: 133 FKLFEKMQSTGMVPS-------LKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDES 184
F LF +M+ G+ P KC +S +L L H +R L +
Sbjct: 88 FLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRP----HSLLLCTMLHAACLRTMLPSAAPF 143
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKP-----------------------------DD 215
++ +LI MY++ G + ARR FD+ +K D
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRD 203
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC-------------- 261
W ++I+ Y R AV F M + P+ + +AVLSAC
Sbjct: 204 VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHL 263
Query: 262 ---------------------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
G A Q+F D G P+ + + ++D +
Sbjct: 264 LVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVF----DALGRGPRPQSWNAIIDGYCKH 319
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCH---LNSDLGEEMAMKLQEMEPENPTPFVI 357
G +D AR L E+ + ++S++ + H L L M+M+ ++ +N T +
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTG-YIHSGQLREALLLFMSMRRHDLRVDNFTVVNL 378
Query: 358 LS 359
L+
Sbjct: 379 LT 380
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 208/388 (53%), Gaps = 40/388 (10%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L EP+ + +SVIS+C+ + + GR +H +K + + +L+DMY K G +
Sbjct: 405 LGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTA 464
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+F H + D +WN++IS +
Sbjct: 465 TWRIF------------------------------------HRTLQRDVISWNTLISSYK 488
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G+ EA LF+KM + P+ VLSACA L++L G++ H ++ + +
Sbjct: 489 QSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNIT 548
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ TALI MY KCG+ +R+ F+ E + D WN MIS YG +G ESA+EIF LM++
Sbjct: 549 IRTALIDMYAKCGELETSRKLFNSTEER--DVILWNVMISNYGMHGHVESAMEIFQLMEE 606
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+KPN+ +F+++LSAC H GHV + +F M +G++P +H+ ++DLLGRSG L+
Sbjct: 607 SNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLE 665
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
A L+ +P P +V+ SLL AC H ++G +A E +P+N ++ILS++Y+
Sbjct: 666 AAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYS 725
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
LGRW++V ++R M+ R + K G SA
Sbjct: 726 CLGRWDEVEKVRDMMKKRGVEKRAGWSA 753
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 173/412 (41%), Gaps = 74/412 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG-------C 61
PN T S AC L L G+ +HGL LK ++ + ++ MY +CG C
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 267
Query: 62 L-------------------------PCAHNVFQELKGSRNILTWNTMIAGMMLN-GRSE 95
C H +F E++ S I+ +I+ M++ G S+
Sbjct: 268 FCKLDQKDLISWTSIIAVHSKFGLMSECLH-LFWEMQASE-IIPDEIVISCMLMGFGNSD 325
Query: 96 KAME-------------LFEGLAHEG--------------------FKPDPATWNSMISG 122
+ E G+ H F W++MI G
Sbjct: 326 RIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILG 385
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+S +G + + +M G P L + SV+S+C+ + A+ +G+ H + I+ + ++
Sbjct: 386 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIEN 445
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S+A +L+ MY K G + R F + D WN +IS Y ++G A+ +FD M
Sbjct: 446 VSVANSLMDMYGKSGHVTATWRIFHR--TLQRDVISWNTLISSYKQSGILAEAIILFDKM 503
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+EKV PN + + VLSAC H +D+ +I + ++ G + ++D+ + G
Sbjct: 504 VKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKEN-GFESNITIRTALIDMYAKCGE 562
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
L+ +R+L E V +++ ++ H + + E+ Q ME N P
Sbjct: 563 LETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI---FQLMEESNIKP 611
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPC 64
S PN T V+S CA L+ G +HGLT K+ ++ IG++ + MY KCG +
Sbjct: 103 SSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVES 162
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ ++++TW +I G + N S + ++
Sbjct: 163 ASIMFSEIT-VKDVVTWTALIVGYVQNNESGRGLKC------------------------ 197
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
LFE M G P+ K + S AC DL AL GK HG ++ E
Sbjct: 198 ----------LFE-MHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV 246
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ + ++SMY +CG P A R F + + K D W ++I+ + + G + +F MQ
Sbjct: 247 VKSTILSMYSRCGSPEEAYRCFCKLDQK--DLISWTSIIAVHSKFGLMSECLHLFWEMQA 304
Query: 245 EKVKPNSASFVAVLSACGHAGHV 267
++ P+ +L G++ +
Sbjct: 305 SEIIPDEIVISCMLMGFGNSDRI 327
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H++ S N+ ++A + + + LF L H D WNS+I
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFR-LIHS---KDIFLWNSIIQSHFS 85
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDES 184
G AF + +M+++ +P+ V V+S CA+L G HG + L + +
Sbjct: 86 NGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSA 145
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++ I MY KCG A F + +K D W A+I GY +N E ++ M +
Sbjct: 146 IGSSFIYMYSKCGHVESASIMFSEITVK--DVVTWTALIVGYVQNNESGRGLKCLFEMHR 203
Query: 245 EKVKPNSASFVAVLSAC 261
PN + + AC
Sbjct: 204 IGGTPNYKTIGSGFQAC 220
>gi|15241651|ref|NP_196468.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171895|sp|Q9FNN7.1|PP371_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g08510
gi|9759345|dbj|BAB10000.1| unnamed protein product [Arabidopsis thaliana]
gi|50897238|gb|AAT85758.1| At5g08510 [Arabidopsis thaliana]
gi|332003930|gb|AED91313.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 511
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 203/362 (56%), Gaps = 8/362 (2%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
R +H + +SD+ T L+ Y K G L CA VF E+ R++ WN MI G
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEM-SKRDVPVWNAMITGYQR 160
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLK 149
G + AMELF+ + + + +W ++ISGFSQ G EA K+F M+ V P+
Sbjct: 161 RGDMKAAMELFDSMP----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHI 216
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
V SVL ACA+L L++G+ G+ + + A I MY KCG A+R F++
Sbjct: 217 TVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEEL 276
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
+ WN+MI +G+++ A+ +F M +E KP++ +FV +L AC H G V K
Sbjct: 277 G-NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVK 335
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGAC 328
++F M++ + PK EH+GCM+DLLGR G+L EA +LI+ +P +P V+ +LLGAC
Sbjct: 336 GQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGAC 395
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPG 388
H N ++ E + L ++EP NP VI+SNIYA +W+ V R+R+++ +TK G
Sbjct: 396 SFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAG 455
Query: 389 IS 390
S
Sbjct: 456 YS 457
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 146/309 (47%), Gaps = 26/309 (8%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +PN +T +SV+ ACA+L L+ GR++ G + + + A ++MY KCG + A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F+EL RN+ +WN+MI + +G+ ++A+ LF + EG KPD T+ ++
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 126 LGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
GM + +LF+ M+ + P L+ C+ +L L +E + + +
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKL------QEAYDLIKTMPMKP 383
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + L+ G A + F+++P +P M + Y N +++ + +
Sbjct: 384 DAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRK 443
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVDLLG 298
LM++E + A G++ V+ + + FT+ D P+ +++ +
Sbjct: 444 LMKKE----------TMTKAAGYSYFVEVGVDVHKFTVEDKS---HPRSYEIYQVLEEIF 490
Query: 299 RSGRLDEAR 307
R +L+++R
Sbjct: 491 RRMKLEKSR 499
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N +I + E+ L+ + G+ PS + +A A S+ + + H
Sbjct: 50 YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
R+ D T LI+ Y K G ARR FD E+ D WNAMI+GY R G+ ++A
Sbjct: 110 RSGFESDSFCCTTLITAYAKLGALCCARRVFD--EMSKRDVPVWNAMITGYQRRGDMKAA 167
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+E+FD M ++ N S+ V+S G+ +AL++F M+ D +KP ++
Sbjct: 168 MELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 296 LLGRSGRLDEAREL 309
G L+ R L
Sbjct: 224 ACANLGELEIGRRL 237
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 142/306 (46%), Gaps = 13/306 (4%)
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + S L +N +I ++ + +++ L+ L+ +G +P T+N + + +
Sbjct: 35 ARKLFDHHQNSCTFL-YNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASA 93
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L + +G C T++++A A L AL + + + +D
Sbjct: 94 SFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVP 149
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ A+I+ Y + G A FD K + W +ISG+ +NG Y A+++F M++
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRK--NVTSWTTVISGFSQNGNYSEALKMFLCMEK 207
Query: 245 EK-VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+K VKPN + V+VL AC + G ++ ++ ++ G +++ + G +
Sbjct: 208 DKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN-GFFDNIYVCNATIEMYSKCGMI 266
Query: 304 DEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFV--ILS 359
D A+ L EL + + ++S++G+ H D + A L+E E + FV +L+
Sbjct: 267 DVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLA 326
Query: 360 NIYAGL 365
++ G+
Sbjct: 327 CVHGGM 332
>gi|347954512|gb|AEP33756.1| chloroplast biogenesis 19, partial [Raphanus sativus]
Length = 476
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/387 (33%), Positives = 212/387 (54%), Gaps = 29/387 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
EPN +T I+++S C+ L G +HG K+ ++ M+GTA++ MY K A
Sbjct: 66 EPNHITLIALLSGCSDCEPL--GDSLHGYACKLGFDRNHVMVGTAILGMYSKRRRFRKAR 123
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + G N +TWNTMI +G+ D + MI+GF +
Sbjct: 124 LVFDRM-GDXNSVTWNTMI---------------------DGYXRDLISXTXMINGFVKK 161
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ EA F +MQ +G+ P + + L+AC +L AL G H +V+ D + ++
Sbjct: 162 GLNEEALAWFREMQVSGVEPDYVAIIAALAACTNLGALSFGLWVHRYVVSQDFKNNVRVS 221
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI +Y +CG +AR+ FD+ E + WN++I G+ NG ++ F MQ+E+
Sbjct: 222 NSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGHAHESLVYFRKMQEER 279
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP++ +F L+AC H G V++ ++ F M D+ + P+ EH+GC+VDL R+GRL++A
Sbjct: 280 FKPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEDA 339
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLN-SDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+++ +P +P V SLL AC H N ++L E M L E++ ++ + +VILSN+YA
Sbjct: 340 LKVVESMPMKPNEVVIGSLLAACRTHGNDTELAERMMKHLSELKVKSHSNYVILSNMYAA 399
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
G+WE ++R+ + L K PG S+
Sbjct: 400 DGKWEGASKMRRKMKGLGLKKQPGFSS 426
>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
Length = 492
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 196/348 (56%), Gaps = 8/348 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + ++ Y+ + A VF + R++++WNTMI G + G A E+F+G
Sbjct: 22 DVFLCNVMLAAYVSRSEVAEARKVFDGMP-MRDLVSWNTMIHGYAMRGEVGLAREIFDGT 80
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
D +W+SMIS +++ EA +L+ +M + ++P + SV+SAC+DL AL
Sbjct: 81 EDR----DAFSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGAL 136
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
+G E H V + D + TALI MY KCG A+R FD+ K D W++MI
Sbjct: 137 AVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEK--DVQTWSSMII 194
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +G ++ +F M E +KPN +FV VL AC H G V + + F M++ G++
Sbjct: 195 GLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIE 254
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+GCMVDLLGRSG ++EAR+LIR + EP ++ +LLGAC H N ++ EE K
Sbjct: 255 PTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALLGACRIHKNVEIAEEAMAK 314
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
L+ ++P +V+LSNIYA WE V +R+ I + ++PG S+
Sbjct: 315 LRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGRSS 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +T +SV+SAC+ L L G +VH + D +GTAL+DMY KCG + A V
Sbjct: 118 PDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRV 177
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++ TW++MI G+ +G +++ LF + EG KP+ T+ ++ + +G+
Sbjct: 178 FDRMP-EKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGL 236
Query: 129 RFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
E K F M G+ P+++ C+ +L
Sbjct: 237 VSEGKKYFRSMNEVHGIEPTVEHYGCMVDLL 267
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 210/374 (56%), Gaps = 8/374 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF SV+SAC++L + G QVH K+ +D +I +ALVDMY KC A +F +L
Sbjct: 307 TFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDL 366
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ IL N+MI GR + A ++F+ + + +WNSMI GFSQ EA
Sbjct: 367 QAYDTILL-NSMITVYSNCGRIDDARQIFDTMPSKSL----ISWNSMIVGFSQNACPIEA 421
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF +M G+ + V+SACA +S+L+LG++ L D+ ++T+L+
Sbjct: 422 LDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDF 481
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG R+ FD+ + D WN+M+ GY NG A+ +FD M+ V+P
Sbjct: 482 YCKCGLVEHGRKLFDR--MMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDI 539
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+FV VLSAC H G V++ + F M D+ + P EH+ CMVDL R+G L++A LI +
Sbjct: 540 TFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQ 599
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P + S++ S+L C H N+ LG+++A ++ +++PEN +V LS IYA W
Sbjct: 600 MPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRS 659
Query: 372 GRIRQMINDRQLTK 385
++R+++ D+++ K
Sbjct: 660 AQVRKLMYDKKIPK 673
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 195/383 (50%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +VI+ C++L L+ G Q+ L +++ S++++ +A +D++ KC L + V
Sbjct: 939 PDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRV 998
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E I W++++ N+MIS ++ G
Sbjct: 999 FEE------IYQWDSVLC------------------------------NAMISSYAWHGF 1022
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +LF + P+ ++ VLSA + L + G + H V+++ L D +A++
Sbjct: 1023 GENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASS 1082
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY K G A + F + I D WN MI G NG A+EIF +
Sbjct: 1083 LVEMYAKFGLIDSAMKTFAK--IGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPP 1140
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + VL AC G VD+ L IF+ M+ ++G+ P EH+ C+VD++ R G+L EA +
Sbjct: 1141 PDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMD 1200
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
++ +P EP+ ++ SLL AC + + E +A ++ E+EP++ P+++L+ Y GR
Sbjct: 1201 IVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGR 1260
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WE + R+ + + ++ + K+ G S
Sbjct: 1261 WESLVRVXRAMKEKGVRKVIGCS 1283
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 180/402 (44%), Gaps = 99/402 (24%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHNVFQELKGSR 76
+ +C + + GR +H L LK + IG L+ MY +C + A +F+E+ R
Sbjct: 13 LGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMP-KR 71
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N +WNTMI G + +G K++ELF+ + H+ D +WN +ISGF++ G A +LF
Sbjct: 72 NCFSWNTMIEGYLKSGSKGKSLELFDSMPHK----DAFSWNVVISGFAKEGNLEVARRLF 127
Query: 137 EKM----------------------QSTGMVPSLK------------CVTSVLSACADLS 162
+M ++ G+ L + +V+ AC +L
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF------DQFEI----- 211
AL GK+ H ++ ++ D + ++L+++Y KCG A D F +
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 212 ------KPDDP------------AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
+ +D WN+MISGY N E A+E+F+ M+++ V+ + ++
Sbjct: 248 GYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 254 FVAVLSACGHAGHVDKALQI--------FT---MMDD---DFGLKPKQEHFGC------- 292
F +VLSAC G +D+ +Q+ FT ++D D K ++ C
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 293 ---------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
M+ + GR+D+AR++ +P ++ ++S++
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMI 409
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 41/346 (11%)
Query: 13 TFI--SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
TF+ +V+ AC +L L G+Q+H + E + D+++G++LV++Y KCG + A++V
Sbjct: 173 TFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLN 232
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQLGM 128
+K + + + +I+G GR A +F K + WNSMISG+
Sbjct: 233 LMK-EPDAFSLSALISGYASCGRMNDARRIF------CLKSNXCVVLWNSMISGYVANNE 285
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF M+ G+ SVLSAC+ L + G + H HV + D + +A
Sbjct: 286 ALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSA 345
Query: 189 LISMYMKCGQPSWARRFFDQ----------------------------FEIKPDDPAF-W 219
L+ MY KC +P A + F F+ P W
Sbjct: 346 LVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISW 405
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N+MI G+ +N A+++F M + ++ + S V+SAC ++ QIF
Sbjct: 406 NSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARA-T 464
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
GL+ Q +VD + G ++ R+L + + ++S+L
Sbjct: 465 IIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSML 510
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 159/329 (48%), Gaps = 14/329 (4%)
Query: 36 LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSE 95
+ +K+ + T +G +D+Y + G + VF+++ +N+++WN + + G E
Sbjct: 735 MLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII-DKNLISWNIFLKAFVRFGELE 793
Query: 96 KAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVL 155
+A ++F+ + K D +WN+MISG+ G+ +AF+ F +MQ G+ PS +++L
Sbjct: 794 RARDVFDEMP----KRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL 849
Query: 156 SACADLSALKLGKETHGHVIRADLN-KDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
S +S+ GK+ H +IR ++ + + +LI MY K G +A F E
Sbjct: 850 SF---VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITME--EL 904
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D WN++I G++G A+ F LM+ P+ + V++ C + ++K QIF
Sbjct: 905 DIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF 964
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA-CWCHLN 333
+ G +DL + RL+++ + E+ + + ++++ + W
Sbjct: 965 ALC-IRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFG 1023
Query: 334 SDLGEEMAMKLQE-MEPENPTPFVILSNI 361
+ + + L+E + P T ++LS +
Sbjct: 1024 ENALQLFVLTLRENLRPTEFTLSIVLSAV 1052
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 43/300 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-SDTMIGTALVDMYLKCGCLPCAH 66
P+ T+ +++S +S G+Q+H ++ S+ ++G +L+ MY K G + A
Sbjct: 839 RPSGFTYSTLLSFVSSACR---GKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAF 895
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF ++ +I++WN++I W+ SG+ L
Sbjct: 896 GVFITME-ELDIISWNSLI------------------------------WSCGKSGYQNL 924
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+R F M+S G P V++V++ C++L L+ G++ IR + ++
Sbjct: 925 ALR-----QFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVS 979
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+A I ++ KC + + R F+ EI D NAMIS Y +G E+A+++F L +E
Sbjct: 980 SASIDLFSKCNRLEDSVRVFE--EIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLREN 1037
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P + VLSA VD+ QI +++ GL+ +V++ + G +D A
Sbjct: 1038 LRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKS-GLESDVIVASSLVEMYAKFGLIDSA 1096
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 109/248 (43%), Gaps = 22/248 (8%)
Query: 155 LSACADLSALKLGKETHGHVIRAD-LNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
L +C + ++ G+ H +++ L+ S+ L+ MY +C A++ F++ P
Sbjct: 13 LGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEM---P 69
Query: 214 DDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
F WN MI GY ++G ++E+FD M + ++ S+ V+S G+++ A +
Sbjct: 70 KRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHK----DAFSWNVVISGFAKEGNLEVARR 125
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS-------VYHSLL 325
+F M G+ + M+ +GR EA L ++L + V +++
Sbjct: 126 LFNEMPWKNGIA-----WNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVV 180
Query: 326 GACWCHLNSDLGEEMAMKLQEMEPENPTPF-VILSNIYAGLGRWEDVGRIRQMINDRQLT 384
GAC D G+++ ++ E E + L N+Y G + + ++ +
Sbjct: 181 GACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAF 240
Query: 385 KLPGISAG 392
L + +G
Sbjct: 241 SLSALISG 248
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQ-VHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+P +TF+ V+SAC ++ GR+ + + L + +VD+Y + G L A
Sbjct: 535 QPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAM 594
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRS 94
N+ +++ + W++++ G + +G +
Sbjct: 595 NLIEQMPLKADTSMWSSVLRGCVAHGNN 622
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 213/381 (55%), Gaps = 40/381 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+SV I + AC+ + ++ GR++HG ++ + AL+ MY +C L A+N+F
Sbjct: 329 DSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLF 388
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q + ++NI+TW NSM+SG++ +
Sbjct: 389 QSTR-TKNIITW-----------------------------------NSMLSGYTHMDRS 412
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-TA 188
EA LF +M +G+ P+ + S+L CA ++ L+ GKE H +++R KD + +
Sbjct: 413 EEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNS 472
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY + G+ A+R FD I D + ++I+GYG GE A+++FD M++ +K
Sbjct: 473 LVDMYARSGKVLEAKRLFDS--ISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIK 530
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + VAVLSAC H+G V + +++F +M +G+ P+ EHF CMVDL GR+G L +A+E
Sbjct: 531 PDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKE 590
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P+ +++ +LLGAC H N+++GE A KL EM PEN +V+++N+YA G
Sbjct: 591 MITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAGC 650
Query: 368 WEDVGRIRQMINDRQLTKLPG 388
W + ++R + D + K PG
Sbjct: 651 WSKLAKVRTYMRDLGVRKAPG 671
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 7/355 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T+ SV+ AC L + FG+++H + + +LV MY K G L A
Sbjct: 191 RPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARC 250
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + R+ ++WNTMI+G G ++A ELF + EG + + TWN++ G Q G
Sbjct: 251 LFENML-ERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSG 309
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +L M+S G+ L AC+ + A+KLG+E HG IR+ + +++
Sbjct: 310 NFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKN 369
Query: 188 ALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI+MY +C + R ++ F+ + + WN+M+SGY E A +F M
Sbjct: 370 ALITMYSRC---KYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSG 426
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++PN + ++L C ++ + + G K + +VD+ RSG++ EA
Sbjct: 427 IEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEA 486
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
+ L + Y SL+ ++ MK + ++P++ T +LS
Sbjct: 487 KRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLS 541
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 38/251 (15%)
Query: 27 LQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIA 86
L G+Q+H L + + + +I LV Y L AH + + + NIL
Sbjct: 109 LSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITE----NSNIL------- 157
Query: 87 GMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP 146
P WN +IS + + G+ EA +++M G+ P
Sbjct: 158 -------------------------HPLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRP 192
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
SVL AC + + GK+ H + + L + + +L+SMY K G+ S AR F
Sbjct: 193 DKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLF 252
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+ ++ DD + WN MISGY G ++ A E+F M+ E ++ N ++ + C +G+
Sbjct: 253 ENM-LERDDVS-WNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGN 310
Query: 267 VDKALQIFTMM 277
++AL++ + M
Sbjct: 311 FEEALELLSHM 321
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 112/246 (45%), Gaps = 11/246 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI-GTALVDMYLKCGCLPCAH 66
EPN VT S++ CA + LQ G++ H L+ D ++ +LVDMY + G + A
Sbjct: 428 EPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAK 487
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F + R+ +T+ ++IAG + G +A++LF+ + KPD T +++S S
Sbjct: 488 RLFDSIS-RRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHS 546
Query: 127 GMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ E KLFE M S G++P L+ ++ L KE + R +M
Sbjct: 547 GLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEM---ITRMPYRPSSAM 603
Query: 186 ATALISMYMKCGQP---SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
L+ G WA E++P++ ++ + + Y G + ++ M
Sbjct: 604 WATLLGACRIHGNAEIGEWAAE--KLLEMRPENSGYYVLIANMYAAAGCWSKLAKVRTYM 661
Query: 243 QQEKVK 248
+ V+
Sbjct: 662 RDLGVR 667
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 130/388 (33%), Positives = 208/388 (53%), Gaps = 40/388 (10%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L EP+ + +SVIS+C+ + + GR +H +K + + +L+DMY K G +
Sbjct: 435 LGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTA 494
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+F H + D +WN++IS +
Sbjct: 495 TWRIF------------------------------------HRTLQRDVISWNTLISSYK 518
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G+ EA LF+KM + P+ VLSACA L++L G++ H ++ + +
Sbjct: 519 QSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNIT 578
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ TALI MY KCG+ +R+ F+ E + D WN MIS YG +G ESA+EIF LM++
Sbjct: 579 IRTALIDMYAKCGELETSRKLFNSTEER--DVILWNVMISNYGMHGHVESAMEIFQLMEE 636
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+KPN+ +F+++LSAC H GHV + +F M +G++P +H+ ++DLLGRSG L+
Sbjct: 637 SNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLE 695
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
A L+ +P P +V+ SLL AC H ++G +A E +P+N ++ILS++Y+
Sbjct: 696 AAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYS 755
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGISA 391
LGRW++V ++R M+ R + K G SA
Sbjct: 756 CLGRWDEVEKVRDMMKKRGVEKRAGWSA 783
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 173/412 (41%), Gaps = 74/412 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG-------C 61
PN T S AC L L G+ +HGL LK ++ + ++ MY +CG C
Sbjct: 238 PNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 297
Query: 62 L-------------------------PCAHNVFQELKGSRNILTWNTMIAGMMLN-GRSE 95
C H +F E++ S I+ +I+ M++ G S+
Sbjct: 298 FCKLDQKDLISWTSIIAVHSKFGLMSECLH-LFWEMQASE-IIPDEIVISCMLMGFGNSD 355
Query: 96 KAME-------------LFEGLAHEG--------------------FKPDPATWNSMISG 122
+ E G+ H F W++MI G
Sbjct: 356 RIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDWSTMILG 415
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+S +G + + +M G P L + SV+S+C+ + A+ +G+ H + I+ + ++
Sbjct: 416 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIEN 475
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
S+A +L+ MY K G + R F + D WN +IS Y ++G A+ +FD M
Sbjct: 476 VSVANSLMDMYGKSGHVTATWRIFHR--TLQRDVISWNTLISSYKQSGILAEAIILFDKM 533
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+EKV PN + + VLSAC H +D+ +I + ++ G + ++D+ + G
Sbjct: 534 VKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKEN-GFESNITIRTALIDMYAKCGE 592
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
L+ +R+L E V +++ ++ H + + E+ Q ME N P
Sbjct: 593 LETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEI---FQLMEESNIKP 641
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 116/263 (44%), Gaps = 39/263 (14%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPC 64
S PN T V+S CA L+ G +HGLT K+ ++ IG++ + MY KCG +
Sbjct: 133 SSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVES 192
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ ++++TW +I G + N S + ++
Sbjct: 193 ASIMFSEIT-VKDVVTWTALIVGYVQNNESGRGLKC------------------------ 227
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
LFE M G P+ K + S AC DL AL GK HG ++ E
Sbjct: 228 ----------LFE-MHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEV 276
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ + ++SMY +CG P A R F + + K D W ++I+ + + G + +F MQ
Sbjct: 277 VKSTILSMYSRCGSPEEAYRCFCKLDQK--DLISWTSIIAVHSKFGLMSECLHLFWEMQA 334
Query: 245 EKVKPNSASFVAVLSACGHAGHV 267
++ P+ +L G++ +
Sbjct: 335 SEIIPDEIVISCMLMGFGNSDRI 357
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 7/197 (3%)
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
H++ S N+ ++A + + + LF L H D WNS+I
Sbjct: 60 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFR-LIHS---KDIFLWNSIIQSHFS 115
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDES 184
G AF + +M+++ +P+ V V+S CA+L G HG + L + +
Sbjct: 116 NGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSA 175
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ++ I MY KCG A F + +K D W A+I GY +N E ++ M +
Sbjct: 176 IGSSFIYMYSKCGHVESASIMFSEITVK--DVVTWTALIVGYVQNNESGRGLKCLFEMHR 233
Query: 245 EKVKPNSASFVAVLSAC 261
PN + + AC
Sbjct: 234 IGGTPNYKTIGSGFQAC 250
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 132/393 (33%), Positives = 217/393 (55%), Gaps = 41/393 (10%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M +P+ + S++ AC +L +L G+ HG L+ + D+ I +L+ +Y++CG
Sbjct: 364 MTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
R A LF+ + + D +WN+MI
Sbjct: 424 --------------------------------RESLARVLFDAVEEK----DEVSWNTMI 447
Query: 121 SGFSQLGMRFEAFKLFEKMQST--GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
+G+SQ G+ E+ +LF +MQS G PSL TS L AC++L A++LGKE H ++AD
Sbjct: 448 AGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKAD 507
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L +D +++++I MY KCG AR FFD+ + K D W MI+GY NG + AV +
Sbjct: 508 LCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAK--DAVSWTVMITGYAVNGRGKEAVGL 565
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
+D M +E ++P+ +++ +L ACGHAG ++ L F M + ++ K EH+ C++ +L
Sbjct: 566 YDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLS 625
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+GR +A L+ +P EP + S+L AC H +LG+++A KL E+EP +V+
Sbjct: 626 RAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVL 685
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
SN+YAG +W+++ ++R+M+ D + K PG S
Sbjct: 686 ASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCS 718
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 164/393 (41%), Gaps = 86/393 (21%)
Query: 2 KECLSD-----EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMY 56
++CL D P+ T ++V+ CA+L + + GR VHGL +K + + LVDMY
Sbjct: 151 RDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMY 210
Query: 57 LKCGCLPCAHNVFQELK--GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE--GFKPD 112
KCG + A F E RN+++WN M+ G NG + A L + E G D
Sbjct: 211 AKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPAD 270
Query: 113 PATW------------------------------------NSMISGFSQLGMRFEAFKLF 136
T N++I+ + + G A ++F
Sbjct: 271 EITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVF 330
Query: 137 E----KMQST----------------------------GMVPSLKCVTSVLSACADLSAL 164
+ KM S+ G P + S+L AC +L L
Sbjct: 331 DGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHL 390
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
GK HG ++R L KD + +L+S+Y++CG+ S AR FD E K D WN MI+
Sbjct: 391 LHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEK--DEVSWNTMIA 448
Query: 225 GYGRNGEYESAVEIFDLMQQEKVK--PNSASFVAVLSACGH--AGHVDKALQIFTMMDDD 280
GY +NG ++++F MQ +K P+ + + L AC A + K + F + D
Sbjct: 449 GYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKAD- 507
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
L ++D+ + G +D+AR L
Sbjct: 508 --LCEDSFLSSSIIDMYSKCGSVDDARVFFDRL 538
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 136/326 (41%), Gaps = 50/326 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T + +C GRQVH + K+ D +G +LV MY +CG + A
Sbjct: 65 PDRFTLPPALKSCRG----DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEK 120
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + G RN+++WN ++A + + +ELF
Sbjct: 121 VFEGMAG-RNLVSWNALMAAV---ADPRRGLELFR------------------------- 151
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E + T P + +VL CA L+ + G+ HG +++ + ++
Sbjct: 152 ------DCLEDLGGTA-APDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD---DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
L+ MY KCG+ + A F E P + WN M+ GY RNGE +A + MQ
Sbjct: 205 VLVDMYAKCGEMADAECAF--LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQM 262
Query: 245 EK--VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF-GCMVDLLGRSG 301
E+ V + + ++VL C + K ++ + GL + ++ GR G
Sbjct: 263 EERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRR-GLHLTGDMVPNALIAAYGRCG 321
Query: 302 RLDEARELIRELPEPTVSVYHSLLGA 327
L A + + VS +++L+GA
Sbjct: 322 CLLHACRVFDGICSKMVSSWNALIGA 347
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGH 173
WN +++ S+ G +A + ++ S G+ P + L +C G++ H
Sbjct: 33 WNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHAV 88
Query: 174 VIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
+ L + D + +L+SMY +CG+ A + F+ + + WNA+++ +
Sbjct: 89 AAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGR--NLVSWNALMAAV---ADP 143
Query: 233 ESAVEIF-DLMQQ--EKVKPNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQE 288
+E+F D ++ P+ A+ V VL C + + + + + P+
Sbjct: 144 RRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVS 203
Query: 289 HFGCMVDLLGRSGRLDEARELIRELP 314
+ +VD+ + G + +A E P
Sbjct: 204 NV--LVDMYAKCGEMADAECAFLEAP 227
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 205/382 (53%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T +++ + A L + RQVHGL++K SD + +L+D Y KC + A +F
Sbjct: 432 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 491
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E D ++ SMI+ ++Q G
Sbjct: 492 EECTIG------------------------------------DLVSFTSMITAYAQYGQG 515
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KLF +MQ + P +S+L+ACA+LSA + GK+ H H+++ D +L
Sbjct: 516 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 575
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG A R F E+ W+AMI G ++G A+++F+ M +E V P
Sbjct: 576 VNMYAKCGSIDDAGRAFS--ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSP 633
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V+VL AC HAG V +A F M++ FG KP QEH+ CM+DLLGR+G+++EA EL
Sbjct: 634 NHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVEL 693
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++P E SV+ +LLGA H + +LG A L +EPE V+L+NIYA G+W
Sbjct: 694 VNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKW 753
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E+V +R+++ D ++ K PG+S
Sbjct: 754 ENVAEVRRLMRDSKVKKEPGMS 775
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 177/386 (45%), Gaps = 46/386 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN + S+++AC L G+ +HG +K+ D ALVDMY K G L A +
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL----------------------- 104
VF+++K +I++WN +IAG +L+ E+A+EL +
Sbjct: 315 VFEKIK-QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGL 373
Query: 105 ------------AHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
A F + D WN++ISG+SQ EA LF +M G+ +
Sbjct: 374 VDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 433
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
++++L + A L + + ++ HG +++ + D + +LI Y KC A R F++
Sbjct: 434 TTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 493
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
I D + +MI+ Y + G+ E A+++F MQ ++KP+ ++L+AC + +
Sbjct: 494 CTI--GDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFE 551
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ Q+ + +G +V++ + G +D+A EL E + + +++G
Sbjct: 552 QGKQLHVHI-LKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGL 610
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTP 354
H + G + +M E +P
Sbjct: 611 AQHGH---GRQALQLFNQMLKEGVSP 633
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 155/359 (43%), Gaps = 41/359 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV++ ++S C + L+ G Q+H K D I L+++Y KC A
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK- 112
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
L E +PD +W+++ISG++Q G+
Sbjct: 113 -----------------------------------LVDESSEPDLVSWSALISGYAQNGL 137
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A F +M G+ + +SVL AC+ + L++GK+ HG V+ + D +A
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KC + ++R FD EI + WNA+ S Y + AV +F M +K
Sbjct: 198 LVVMYAKCDEFLDSKRLFD--EIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255
Query: 249 PNSASFVAVLSACGHAGHVDKAL-QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S ++++AC G D + +I G +VD+ + G L +A
Sbjct: 256 PNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ ++ +P + +++++ C H + + E+ +++ + + S+++ +G
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVG 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ S+++ACA+L + G+Q+H LK D G +LV+MY KCG + A
Sbjct: 531 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 590
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F EL R I++W+ MI G+ +G +A++LF + EG P+ T S++ + G
Sbjct: 591 AFSELT-ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 649
Query: 128 MRFEAFKLFEKMQST-GMVP---SLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ EA FE M+ G P C+ +L ++ A++L V + +
Sbjct: 650 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVEL-------VNKMPFEAN 702
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
S+ AL+ RR + F ++P+ + + Y G++E+ E+ L
Sbjct: 703 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 762
Query: 242 MQQEKVK 248
M+ KVK
Sbjct: 763 MRDSKVK 769
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 12/263 (4%)
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
H FKP P +I Q + + + P+ + +LS C +L+
Sbjct: 18 HLPFKPAP----KLIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLR 73
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G + H H+ ++ L+ D S+ LI++Y KC +AR+ D E D W+A+ISG
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVD--ESSEPDLVSWSALISG 131
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y +NG A+ F M VK N +F +VL AC + Q+ ++ G +
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEG 190
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
+V + + +++ L E+PE V +++L C++ D E
Sbjct: 191 DVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS---CYVQXDFCGEAVGLFY 247
Query: 346 EMEPE--NPTPFVILSNIYAGLG 366
EM P F + S + A G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTG 270
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 213/384 (55%), Gaps = 7/384 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT I+V+SACA L L+ GR +H L + + + AL+DMY KCG A V
Sbjct: 237 PDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQV 296
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L +WN +I G +G + A LF+ E D T+NSM++G+ G
Sbjct: 297 FDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFD----EMEVRDIITFNSMMTGYIHSGQ 352
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF M+ + V ++L+ACA L AL+ G+ H + + + D + TA
Sbjct: 353 LREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTA 412
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MYMKCG+ A F + + D W AMI+G NG ++A+E F M+ + +
Sbjct: 413 LLDMYMKCGRVDEATIVFQRMGKR--DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQ 470
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PNS S++AVL+AC H+ +++ F M + + P+ EH+GCM+DLLGRSG LDEA +
Sbjct: 471 PNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMD 530
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L++ +P +P ++ S+L AC H + DL + A L ++EP+ +V L NIY +
Sbjct: 531 LVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQ 590
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
WE+ +IR ++ +RQ+ K G S+
Sbjct: 591 WENASKIRMLMEERQVKKTAGYSS 614
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 113/230 (49%), Gaps = 10/230 (4%)
Query: 48 IGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
+ +L+ MY++ G A F E+ ++ + W +I+G+ G L +
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIH-VKDAVAWTMLISGLAKMGMLCDTQLLLS----Q 198
Query: 108 GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLG 167
D +W S+I+ +S+ EA F+ M S G+ P V +VLSACA L L+LG
Sbjct: 199 APVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELG 258
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
+ H V + E++ ALI MY KCG A++ FD P P WNA+I GY
Sbjct: 259 RSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGP-RPQSWNAIIDGYC 317
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
++G + A +FD M+ + +F ++++ H+G + +AL +F M
Sbjct: 318 KHGHVDVARSLFDEMEVRDI----ITFNSMMTGYIHSGQLREALLLFMSM 363
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 108/302 (35%), Gaps = 84/302 (27%)
Query: 133 FKLFEKMQSTGMVPS-------LKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDES 184
F LF +M+ G+ P KC +S +L L H +R L +
Sbjct: 88 FLLFRRMRRAGVRPDGFTFHFLFKCSSSSSRP----HSLLLCTMLHAACLRTMLPSAAPF 143
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKP-----------------------------DD 215
++ +LI MY++ G + ARR FD+ +K D
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMGMLCDTQLLLSQAPVRD 203
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC-------------- 261
W ++I+ Y R AV F M + P+ + +AVLSAC
Sbjct: 204 VISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHL 263
Query: 262 ---------------------GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
G A Q+F D G P+ + + ++D +
Sbjct: 264 LVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVF----DALGRGPRPQSWNAIIDGYCKH 319
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCH---LNSDLGEEMAMKLQEMEPENPTPFVI 357
G +D AR L E+ + ++S++ + H L L M+M+ ++ +N T +
Sbjct: 320 GHVDVARSLFDEMEVRDIITFNSMMTG-YIHSGQLREALLLFMSMRRHDLRVDNFTVVNL 378
Query: 358 LS 359
L+
Sbjct: 379 LT 380
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 205/382 (53%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N T +++ + A L + RQVHGL++K SD + +L+D Y KC + A +F
Sbjct: 459 NQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIF 518
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+E D ++ SMI+ ++Q G
Sbjct: 519 EECTIG------------------------------------DLVSFTSMITAYAQYGQG 542
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA KLF +MQ + P +S+L+ACA+LSA + GK+ H H+++ D +L
Sbjct: 543 EEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSL 602
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY KCG A R F E+ W+AMI G ++G A+++F+ M +E V P
Sbjct: 603 VNMYAKCGSIDDAGRAFS--ELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSP 660
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V+VL AC HAG V +A F M++ FG KP QEH+ CM+DLLGR+G+++EA EL
Sbjct: 661 NHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVEL 720
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ ++P E SV+ +LLGA H + +LG A L +EPE V+L+NIYA G+W
Sbjct: 721 VNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKW 780
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E+V +R+++ D ++ K PG+S
Sbjct: 781 ENVAEVRRLMRDSKVKKEPGMS 802
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 54/370 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN + S+++AC L G+ +HG +K+ D ALVDMY K G L A +
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+++K +PD +WN++I+G
Sbjct: 315 VFEKIK------------------------------------QPDIVSWNAVIAGCVLHE 338
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +L +M+ +G+ P++ ++S L ACA + +LG++ H +++ D+ D ++
Sbjct: 339 HHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSV 398
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KC AR F+ K D WNA+ISGY + E A+ +F M +E +
Sbjct: 399 GLVDMYSKCDLLEDARMAFNLLPEK--DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGI 456
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH------FGCMVDLLGRSG 301
N + +L + LQ+ + GL K ++D G+
Sbjct: 457 GFNQTTLSTILKSTA-------GLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCS 509
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI--LS 359
+++A + E + + S++ A + + ++ +++Q+ME + P FV L
Sbjct: 510 HVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELK-PDRFVCSSLL 568
Query: 360 NIYAGLGRWE 369
N A L +E
Sbjct: 569 NACANLSAFE 578
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 166/370 (44%), Gaps = 49/370 (13%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV++ ++S C + L+ G Q+H K D I L+++Y KC
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKC--------- 104
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
RN G + K L E +PD +W+++ISG++Q G+
Sbjct: 105 -------RNF-------------GYARK-------LVDESSEPDLVSWSALISGYAQNGL 137
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A F +M G+ + +SVL AC+ + L++GK+ HG V+ + D +A
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANT 197
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KC + ++R FD EI + WNA+ S Y + AV +F M +K
Sbjct: 198 LVVMYAKCDEFLDSKRLFD--EIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255
Query: 249 PNSASFVAVLSACGHAGHVDKAL-QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN S ++++AC G D + +I G +VD+ + G L +A
Sbjct: 256 PNEFSLSSMVNAC--TGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAI 313
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIY--A 363
+ ++ +P + +++++ C H + + E+ L +M+ P F + S + A
Sbjct: 314 SVFEKIKQPDIVSWNAVIAGCVLHEHHEQALEL---LGQMKRSGICPNIFTLSSALKACA 370
Query: 364 GLGRWEDVGR 373
G+G +++GR
Sbjct: 371 GMG-LKELGR 379
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 14/247 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ S+++ACA+L + G+Q+H LK D G +LV+MY KCG + A
Sbjct: 558 KPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGR 617
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F EL R I++W+ MI G+ +G +A++LF + EG P+ T S++ + G
Sbjct: 618 AFSELT-ERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAG 676
Query: 128 MRFEAFKLFEKMQST-GMVP---SLKCVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ EA FE M+ G P C+ +L ++ A++L V + +
Sbjct: 677 LVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVEL-------VNKMPFEAN 729
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
S+ AL+ RR + F ++P+ + + Y G++E+ E+ L
Sbjct: 730 ASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRL 789
Query: 242 MQQEKVK 248
M+ KVK
Sbjct: 790 MRDSKVK 796
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 12/263 (4%)
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
H FKP P + + FSQ L +K T P+ + +LS C +L+
Sbjct: 18 HLPFKPAPKLIQT-VPQFSQDPQTTAILNLIDKGNFT---PTSVSYSKLLSQCCTTKSLR 73
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G + H H+ ++ L+ D S+ LI++Y KC +AR+ D E D W+A+ISG
Sbjct: 74 PGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVD--ESSEPDLVSWSALISG 131
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y +NG A+ F M VK N +F +VL AC + Q+ ++ G +
Sbjct: 132 YAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVS-GFEG 190
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
+V + + +++ L E+PE V +++L C++ D E
Sbjct: 191 DVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFS---CYVQIDFCGEAVGLFY 247
Query: 346 EMEPE--NPTPFVILSNIYAGLG 366
EM P F + S + A G
Sbjct: 248 EMVLSGIKPNEFSLSSMVNACTG 270
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 215/414 (51%), Gaps = 38/414 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S TF S++ AC + ++ G+ VH K +S + TALVD Y K L A V
Sbjct: 136 PTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKV 195
Query: 69 FQEL------------------------------KGSRNILTWNTMIAGMMLNGRSEKAM 98
F E+ RN TWNTMI G G E A
Sbjct: 196 FDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAE 255
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
LF + + D +W +MI+ +SQ +A ++ +M+ G++P +++V SAC
Sbjct: 256 LLFNQMPTK----DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASAC 311
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
A + AL+LGKE H +V+ LN D + +AL+ MY KCG + F F++ +
Sbjct: 312 AHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIF--FKLTDKNLYC 369
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WNA+I G +G E A+ +F +M++EK+ PN +F+++LSAC HAG VD+ F M
Sbjct: 370 WNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMT 429
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
D+ ++P H+GCMVD+L +SG L+EA ELI+ + EP ++ +LL C H N ++
Sbjct: 430 RDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIA 489
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL-TKLPGIS 390
E+ +L +EP N + +L ++YA W +V IR M+ ++ + K PG S
Sbjct: 490 EDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSS 543
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 72/346 (20%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+ +N+MI GF G F A + + M + + ++P+ +S++ AC + A++LG+
Sbjct: 99 NPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQ 158
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-------------------- 208
H H+ + + TAL+ Y K S AR+ FD+
Sbjct: 159 MVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVG 218
Query: 209 --------FEIKPD-DPAFWNAMISGYGR------------------------------- 228
FE P+ + A WN MI GY R
Sbjct: 219 DMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQ 278
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPK 286
N +Y+ A+ I+ M+ + P+ + V SAC H G ++ K + + M GL
Sbjct: 279 NKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQ---GLNLD 335
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKL 344
+VD+ + G LD + + +L + + +++++ H ++ M M+
Sbjct: 336 VYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMER 395
Query: 345 QEMEPENPTPFVILSN-IYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
+++ P T ILS +AGL D GR R + R P I
Sbjct: 396 EKIMPNGVTFISILSACTHAGL---VDEGRSRFLSMTRDYDIRPDI 438
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 203/385 (52%), Gaps = 42/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHN 67
+ T + ++SACA L ++ G+ +HG ++ + +L++MY C C+ A
Sbjct: 260 ADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARR 319
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ ++ W D +WNSMI G+++ G
Sbjct: 320 LFERVR-------W-----------------------------KDTVSWNSMILGYARNG 343
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
FE+ +LF +M G P +VL AC ++AL+ G H ++++ + + + T
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY KCG + +RR FD+ PD W+AM++GYG +G A+ I D M+
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEM---PDKSLVSWSAMVAGYGLHGRGREAISILDGMKANS 460
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P++ F ++LSAC HAG V + +IF M+ ++ +KP H+ CMVDLLGR+G LDEA
Sbjct: 461 VIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEA 520
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+IR + +PT ++ +LL A H N L E A K+ +M P+ + ++ LSNIYA
Sbjct: 521 YVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAE 580
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RW+DV R+R M+ + L K PG S
Sbjct: 581 KRWDDVERVRAMVRRKGLKKSPGCS 605
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 164/369 (44%), Gaps = 49/369 (13%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C ++ T+ V+ AC LL ++ GR+VH + +SD +G +L+ MY K G +
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF + + D +WN+MISG+
Sbjct: 214 TARMVFDRMA------------------------------------ERDLTSWNTMISGY 237
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKD 182
++ AF +F+ M G+ + +LSACADL A+K GK HG+ +R + N +
Sbjct: 238 AKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYN 297
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ +LI MY C ARR F++ ++ D WN+MI GY RNG+ ++ +F M
Sbjct: 298 KFFTNSLIEMYCNCNCMVDARRLFER--VRWKDTVSWNSMILGYARNGDAFESLRLFRRM 355
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ P+ +F+AVL AC + + I + + G +VD+ + G
Sbjct: 356 ALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKK-GFDANTIVGTALVDMYSKCGS 414
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-----AMKLQEMEPENPTPFVI 357
L +R + E+P+ ++ + +++ H G E MK + P+N I
Sbjct: 415 LACSRRVFDEMPDKSLVSWSAMVAGYGLH---GRGREAISILDGMKANSVIPDNGVFTSI 471
Query: 358 LSNI-YAGL 365
LS +AGL
Sbjct: 472 LSACSHAGL 480
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 82 NTMIAGMMLN-GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQ 140
NT +A G +A +F+G+ + + WN MI G++ G+ ++ L+ +M
Sbjct: 98 NTKLAAFYAGCGLMSQAEVIFDGIVLK----NSFLWNFMIRGYASNGLPMKSLVLYREML 153
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
G VL AC DL +++G+ H V+ L D + +L++MY K G
Sbjct: 154 CFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMG 213
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
AR FD+ + D WN MISGY +N + +A +FDLM + + + + + +LSA
Sbjct: 214 TARMVFDR--MAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSA 271
Query: 261 CG 262
C
Sbjct: 272 CA 273
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 116 WNSMISGFSQ---LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
+NS S FSQ M + + E + SL+C ++L + + + K G++ H
Sbjct: 25 YNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSLQC-GALLQSFTNTKSFKQGQQLHA 83
Query: 173 HVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H+I + L + + T L + Y CG S A FD +K + WN MI GY NG
Sbjct: 84 HMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK--NSFLWNFMIRGYASNGL 141
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
++ ++ M + ++ ++ VL ACG
Sbjct: 142 PMKSLVLYREMLCFGQRADNFTYPFVLKACG 172
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 6/380 (1%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V + ++ ACA + G+Q+H + LK + + LV Y CG + A F+
Sbjct: 278 VLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFR- 336
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L + +WN ++A ++ NG +A ELF+ + D +W++MISG+ Q G
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPER----DTVSWSTMISGYVQTGRSDM 392
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A KLF M +T + P+ + S LSA AD L GK H +++ + +++++ LI
Sbjct: 393 ALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLID 452
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG + A +FF++ K + WNAMI +G ++++F +Q+ +KPNS
Sbjct: 453 MYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNS 512
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ VLSAC HAG V K F M ++G++P +H+GCMVDLLGR+G L+EA +L+
Sbjct: 513 ITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+P +P V ++ S+L A N LGE A +L +++ + + LSNIYA G W +
Sbjct: 573 MMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWIN 632
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V +R+ + D L +L G S
Sbjct: 633 VSVVRKELQDANLERLTGRS 652
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EPN VT S +SA A L G+ +H + Q + + L+DMY KCG + A
Sbjct: 404 SIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADA 463
Query: 66 HNVFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
F + ++ WN MI + ++G + +++LF L KP+ T+ ++S
Sbjct: 464 VQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACC 523
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK 149
G + FE M + G+ P++K
Sbjct: 524 HAGTVTKGKYYFESMTREYGIQPTIK 549
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 166/434 (38%), Gaps = 72/434 (16%)
Query: 27 LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKC-GCLPCAHNVFQELKGS-RNILTWNT 83
L+ G Q+H L K S+ + +++ Y + L A +F E R+ N+
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
++A + G ++A L E + D ++ ++++ F++ G A +F M S
Sbjct: 82 VLAALTRAGYLDRAQGLLEEMPR--IHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSEN 139
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+VP+ + ++A A A HG ++ L+ +AT L+ Y + AR
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF---------------------DLM 242
FD + + WN M++GY + + A E+F DL+
Sbjct: 200 ALFDGMTYR--NTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLI 257
Query: 243 QQE---------KVKPNSAS--FVAVLSACGHAGHVDKALQIFTMM-----DDDFGLKPK 286
+V N V ++ AC V + Q+ T++ D ++
Sbjct: 258 SDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQAT 317
Query: 287 QEHF-GC------------------------MVDLLGRSGRLDEARELIRELPEPTVSVY 321
HF GC ++ L R+G + EAREL ++PE +
Sbjct: 318 LVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSW 377
Query: 322 HSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
+++ SD+ ++ +M +EP T LS I A G + I I
Sbjct: 378 STMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAI-ADSGTLDQGKWIHDYIM 436
Query: 380 DRQLTKLPGISAGI 393
+R + +S+G+
Sbjct: 437 NRPVQLTDNLSSGL 450
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 212/389 (54%), Gaps = 44/389 (11%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C++D + +S IS+C+ L L+ GR H ++K D+ + L+ MY +CG
Sbjct: 423 CVAD-----SLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFD 477
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F GLA K D TWN++IS +
Sbjct: 478 HACKIF---------------------------------GLAK--LKGDVVTWNTLISSY 502
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ LG A L+++M G+ P+ + +V+SACA+L AL+ G++ H +V + D
Sbjct: 503 AHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDV 562
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S+ TALI MY KCGQ ARR FD + D WN MISGYG +GE + A+E+F M+
Sbjct: 563 SINTALIDMYAKCGQLGIARRIFDS--MLQHDVVAWNVMISGYGMHGEAKQALELFGKME 620
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+KPN +F+A+LSA H+G +++ ++FT M + L+P +H+ CMVDLLG+SG L
Sbjct: 621 GGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRM-GKYSLEPNLKHYACMVDLLGKSGHL 679
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA +++ +P EP ++ +LL AC H N ++G +A K +PEN ++++SN Y
Sbjct: 680 QEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSY 739
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
G +W+++ ++R+ + + + K G SA
Sbjct: 740 GGAKKWDEIEKLRETMKNLGVQKGVGWSA 768
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 185/432 (42%), Gaps = 75/432 (17%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PNS T S + AC L L GR +HG +K+ M+ +AL MY KC A
Sbjct: 215 SVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDA 274
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS- 124
+F EL +++++W ++I G +AMELF+ + G +PD + ++SG
Sbjct: 275 CALFLELP-EKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGN 333
Query: 125 ----QLGMRFEA--------------------FKLFEKMQSTGMVPSL------------ 148
G F A + FE + S G V L
Sbjct: 334 NGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLM 393
Query: 149 -----------KCV------------------TSVLSACADLSAL---KLGKETHGHVIR 176
KC+ S++SA + S L +LG+ H + I+
Sbjct: 394 VVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIK 453
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
L++D S+A LI MY +CG+ A + F ++K D WN +IS Y G +A+
Sbjct: 454 HLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLK-GDVVTWNTLISSYAHLGHSNAAM 512
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
++D M E + PNS + + V+SAC + +++ +I + + + G ++D+
Sbjct: 513 SLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYV-KEMGWDYDVSINTALIDM 571
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--EMEPENPTP 354
+ G+L AR + + + V ++ ++ H + E+ K++ ++P T
Sbjct: 572 YAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTF 631
Query: 355 FVILSNI-YAGL 365
ILS + ++GL
Sbjct: 632 LAILSALCHSGL 643
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 44/267 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK----IEKQSDTMIGTALVDMYLKCGCLP 63
P+ T SA A L L G VH ++ + + ++LV MY +CG +
Sbjct: 108 RPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAVASSLVYMYARCGNVR 167
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF+E+ R+++ W +I+G + NG S +
Sbjct: 168 DAVKVFEEMP-ERDVVAWTAVISGCVRNGESGE--------------------------- 199
Query: 124 SQLGMRFEAFKLFEKMQSTG---MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+R+ L E ++ G + P+ + + S L AC L L G+ HG+V++ +
Sbjct: 200 ---GLRY----LVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIG 252
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
+ +AL SMY KC A F E+ D W ++I Y R G A+E+F
Sbjct: 253 DSPMVISALFSMYSKCYSTEDACALF--LELPEKDVVSWTSLIGIYCRRGLITEAMELFQ 310
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHV 267
M + ++P+ VLS G+ G+V
Sbjct: 311 QMMESGLQPDEILVSCVLSGLGNNGNV 337
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 206/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+S T SV+ A ++ G +VHG ++ +D +G++L+DMY C
Sbjct: 168 RPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCT------- 220
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R++ ++++F+ L DP WNS+++G +Q G
Sbjct: 221 -------------------------RTDYSVKVFDNLPVR----DPILWNSVLAGCAQNG 251
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +F +M TG+ P +S++ C +L++L+ GK+ H +VIR + +++
Sbjct: 252 SVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISS 311
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG+ S A FD+ PD + W AMI GY +G A+ +F+ M+
Sbjct: 312 SLIDMYCKCGEISIAHHIFDRM-CSPDVVS-WTAMIMGYALHGPAREALVLFERMELGNA 369
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+AVL+AC HAG VDK + F M D +G+ P EH + D+LGR+G LDEA
Sbjct: 370 KPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAY 429
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I ++ +PT SV+ +LL AC H N+ L EE+A K+ E+EP + V+LSN+Y+ G
Sbjct: 430 NFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASG 489
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW + +R+ + + + K P S
Sbjct: 490 RWNEAAHLRKSMRKKGMKKDPACS 513
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 157/355 (44%), Gaps = 24/355 (6%)
Query: 1 MKECLSDEPN-SVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
M+ C + + + + + +CA+L G +H L ++ +D AL+++Y K
Sbjct: 40 MRACAAPRSSVPASLPAALKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCK- 98
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
LPC++ +T + + G S A+E + E + D +WN++
Sbjct: 99 --LPCSY-------------LHSTGVTSVGGTG-SSTALESVRKVFDEMIERDVVSWNTL 142
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
+ G ++ G EA L KM G P ++SVL A+ + +K G E HG +R
Sbjct: 143 VLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSEVHGFAVRNGF 202
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ D + ++LI MY C + ++ + FD ++ DP WN++++G +NG E A+ IF
Sbjct: 203 DNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVR--DPILWNSVLAGCAQNGSVEEALGIF 260
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M Q V+P +F +++ CG+ + Q+ + G + ++D+ +
Sbjct: 261 RRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRG-GFEDNVFISSSLIDMYCK 319
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
G + A + + P V + +++ H E + + ME N P
Sbjct: 320 CGEISIAHHIFDRMCSPDVVSWTAMIMGYALH---GPAREALVLFERMELGNAKP 371
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 202/383 (52%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +VIS CA+L +++G Q+H L L + + + +++ MY KCG L + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F HE + D +W+++I+G+SQ G
Sbjct: 376 F------------------------------------HEMTRRDIVSWSTIIAGYSQGGH 399
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+L M+ G P+ + SVLSAC +++ L+ GK+ H +V+ L + +A
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSA 459
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY KCG A R FD E DD W AMI+GY +G +++F+ + + ++
Sbjct: 460 LINMYCKCGSIEEASRIFDAAE--NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VLSAC HAG VD + F M + + P +EH+GCM+DLL R+GRL +A
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P V+ +LL AC H + + G A ++ ++EP + L+NIYA G+
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGK 637
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + IR+++ + + K PG S
Sbjct: 638 WREAADIRKLMKSKGVIKEPGWS 660
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 39/302 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E +S TF + ACA L +GR++H +K + + L MY KCG L
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+++ R++++W T+I ++ G+ E A++ F + P+ T+ ++ISG
Sbjct: 274 LFEKMS-MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG----- 327
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
CA+L+ ++ G++ H ++ L S+
Sbjct: 328 ------------------------------CANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++++MY KCGQ + + F E+ D W+ +I+GY + G A E+ M+ E
Sbjct: 358 SIMTMYAKCGQLTSSSVIFH--EMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGP 415
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP + +VLSACG+ ++ Q+ + GL+ ++++ + G ++EA
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYV-LSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 308 EL 309
+
Sbjct: 475 RI 476
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 40/344 (11%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
AC + +G +HG +K + +G+AL+DMY K G + VF E+ RN++
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP-MRNVV 183
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
+W +I G++ G +++A+ F + W S + ++++
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEM-----------WRSRV--------EYDSYTF---- 220
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
L ACAD AL G+E H ++ + +A L +MY KCG+
Sbjct: 221 ------------AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKL 268
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ F++ ++ D W +I+ + G+ E AV+ F M++ V PN +F AV+S
Sbjct: 269 EYGLTLFEKMSMR--DVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C + ++ Q+ ++ GL ++ + + G+L + + E+ +
Sbjct: 327 GCANLARIEWGEQLHALI-LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIV 385
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ +++ + E+ + ME PT F + S + A
Sbjct: 386 SWSTIIAGYSQGGHVSEAFEL-LSWMRMEGPKPTEFALASVLSA 428
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P SV+SAC ++ L+ G+Q+H L I + M+ +AL++MY KCG + A
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +I++W MI G +G S + ++LFE + G +PD T+ ++S S G
Sbjct: 476 IFDAAEND-DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 128 MRFEAFKLFEKMQSTGMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRA-DLNKD 182
+ F+ F M + K C+ +L LS + H+I A ++D
Sbjct: 535 LVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAE-------HMIEAMPFHRD 587
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + + L+ G RR ++ +++P+ + + Y G++ A +I L
Sbjct: 588 DVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKL 647
Query: 242 MQQEKV 247
M+ + V
Sbjct: 648 MKSKGV 653
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQ- 140
N + ++ G A +F+ ++ + D +W ++ISG+ EA LF+ M+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMS----QKDEISWTTLISGYVNANDSSEALLLFKNMRV 108
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+G+ ++ AC S + G+ HG+ ++ L + +AL+ MY K G+
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
RR F + ++ + W A+I+G R G + A+ F M + +V+ +S +F L A
Sbjct: 169 EGRRVFHEMPMR--NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226
Query: 261 CGHAGHVDKALQI 273
C +G ++ +I
Sbjct: 227 CADSGALNYGREI 239
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 12/175 (6%)
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
+ C DL L+ + I D + + +K G ARR FD+ K D
Sbjct: 22 TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQK--D 79
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQE---KVKPNSASFVAVLS--ACGHAGHVDKA 270
W +ISGY + A+ +F M+ E ++ P F+ L+ ACG V+
Sbjct: 80 EISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNSDVNYG 135
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ GL ++D+ ++G++ E R + E+P V + +++
Sbjct: 136 -ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAII 189
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 214/385 (55%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F +SA ASL L G +HG KI D IG++L+D+Y KCG
Sbjct: 313 KPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L +N++ WN+M+ G +NGR E+ ELFE + + + +W ++I+G+ +
Sbjct: 373 VF-DLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEK----NDVSWGTIIAGYLENE 427
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ ++F + +G P+ +SVL ACA +++L G HG +I+ + D + T
Sbjct: 428 QCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGT 487
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
AL MY KCG +++ F++ K + W MI G +G ++ +F+ M++ +
Sbjct: 488 ALTDMYAKCGDIGSSKQVFERMPEKNEIS--WTVMIQGLAESGFAVESLILFEEMERTSE 545
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN ++VL AC H G VDK L F M+ +G+KPK +H+ C+VDLL RSGRL EA
Sbjct: 546 VAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEA 605
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E IR +P +P + + +LL C + + + E A KL ++ N +V+LSNIYA
Sbjct: 606 EEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASA 665
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV IR+++ ++ L K G S
Sbjct: 666 GRWIDVSNIRKLMREKGLKKSGGCS 690
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 45/389 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTF SV+ AC L G + GL +K + + +L+ + L+ G + A V
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R++++W ++ + G +A +F+ + + +W++MI+ +SQ G
Sbjct: 242 FDRME-KRDVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGY 296
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA KLF KM G P++ C LSA A L AL G HGHV + ++KD + ++
Sbjct: 297 AEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSS 356
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG------------------ 230
LI +Y KCG+P R FD I + WN+M+ GY NG
Sbjct: 357 LIDLYCKCGKPDDGRLVFDL--ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDV 414
Query: 231 -------------EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ E +E+F+ + PN ++F +VL AC +DK + + +
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
G++ + D+ + G + ++++ +PE + ++ S
Sbjct: 475 -IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL---AESGFA 530
Query: 338 EEMAMKLQEMEPEN---PTPFVILSNIYA 363
E + +EME + P ++LS ++A
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 138/255 (54%), Gaps = 12/255 (4%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD ++ ++ Y++ G L A +F E+ RN ++W+ +I+G+M GR E++M FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMP-ERNEVSWSALISGLMKYGRVEESMWYFE- 142
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
F+ + +W + ISGF + G+ FEA KLF ++ +G+ P+ TSV+ AC +L
Sbjct: 143 --RNPFQ-NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
LG G V++A S++ +LI++ ++ G+ ARR FD+ E + D W A++
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAIL 257
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
Y G+ A IFD M + N S+ A+++ +G+ ++AL++F+ M + G
Sbjct: 258 DAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GF 312
Query: 284 KPKQEHFGCMVDLLG 298
KP F C + L
Sbjct: 313 KPNISCFACTLSALA 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 70/242 (28%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC------------- 196
CV S+L ++ + G H H+I+ + +A L+ +Y+ C
Sbjct: 24 CV-SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 197 ------------------GQPSWARRFFDQ----------------------------FE 210
G AR FD+ FE
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 211 IKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
P + W A ISG+ RNG A+++F + + V+PN +F +V+ ACG G
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 270 ALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ I ++ +K EH+ ++ L R G +D AR + + + V + ++L
Sbjct: 203 GMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 326 GA 327
A
Sbjct: 258 DA 259
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 210/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T SV+ A + + G+++HG +++ ++ + ++L+DMY KC + ++
Sbjct: 297 KPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYR 356
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L + D +WNS+I+G Q G
Sbjct: 357 VFTLLT------------------------------------ERDGISWNSIIAGCVQNG 380
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E K F +M + P +S++ ACA L+ L LGK+ HG++ R +++ +A+
Sbjct: 381 LFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIAS 440
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG AR+ FD+ ++ D W AMI G +G A+E+F+ M+ E +
Sbjct: 441 SLVDMYAKCGNIRTARQIFDRMRLR--DMVSWTAMIMGCALHGHALDAIELFEQMKTEGI 498
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+AVL+AC HAG VD+A + F M DFG+ P EH+ + DLLGR+GRL+EA
Sbjct: 499 EPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAY 558
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I +P PT SV+ +LL AC H N D+ E++A ++ E++P+N +++L+NIY+
Sbjct: 559 DFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAAR 618
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW++ + R + + K P S
Sbjct: 619 RWKEAAKWRASLRRTGIRKTPACS 642
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 176/420 (41%), Gaps = 71/420 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP----- 63
P+ F SV+ ACA L+ L G +HG +++ D G AL++MY K L
Sbjct: 106 PDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQ 165
Query: 64 --CAHNVFQEL-KGSRNILTWNTMIAGMMLNGRSEKAMELFE------------GLAHEG 108
A V E+ + +R++ T + ++ GR +E F +
Sbjct: 166 RLGASQVLDEMTERTRSVRTASVLVGN---QGRKVSDIEAFNYDVSCRSREFEAQVLEID 222
Query: 109 FKP--------------------------------------DPATWNSMISGFSQLGMRF 130
+KP D +WN++I+G ++ G+
Sbjct: 223 YKPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYG 282
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
E + +M + P ++SVL A+ + GKE HG IR L+ + +A++LI
Sbjct: 283 ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLI 342
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY KC + + R F + D WN++I+G +NG ++ ++ F M K+KP
Sbjct: 343 DMYAKCTRVVDSYRVFTL--LTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPK 400
Query: 251 SASFVAVLSACGHAG--HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
S SF +++ AC H H+ K L + + G +VD+ + G + AR+
Sbjct: 401 SYSFSSIMPACAHLTTLHLGKQLHGYITRN---GFDENIFIASSLVDMYAKCGNIRTARQ 457
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YAGL 365
+ + + + +++ C H ++ E+ MK + +EP +L+ +AGL
Sbjct: 458 IFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGL 517
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 56/264 (21%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P W S+I ++ G+ ++ F M ++G+ P SVL ACA L L LG+
Sbjct: 71 PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESL 130
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG++IR L+ D AL++MY K RF + SG R G
Sbjct: 131 HGYIIRVGLDFDLYTGNALMNMYSKL-------RFLKK---------------SGRQRLG 168
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-------------MM 277
A ++ D M + +AS + G+ G ++ F ++
Sbjct: 169 ----ASQVLDEMTERTRSVRTASVLV-----GNQGRKVSDIEAFNYDVSCRSREFEAQVL 219
Query: 278 DDDFGLKPKQEH-------FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWC 330
+ D+ KP+ E+ G + + S +D R++ +PE + +++++
Sbjct: 220 EIDY--KPRSEYREMEACNLGQQIKDISHSMSVDSVRKIFEMMPEKDLVSWNTIIAG--N 275
Query: 331 HLNSDLGEEMAMKLQEMEPENPTP 354
N GE + M ++EM N P
Sbjct: 276 ARNGLYGETLTM-VREMGGANLKP 298
>gi|297740165|emb|CBI30347.3| unnamed protein product [Vitis vinifera]
Length = 560
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/397 (34%), Positives = 220/397 (55%), Gaps = 22/397 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ S+I AC+ + ++ G HG ++ D + T+L+D+Y KCG + CA V
Sbjct: 169 PDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKV 228
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ G RN+++W MIAG +A +LF+ + + + +WN++ISG+ + G
Sbjct: 229 FDEM-GERNVVSWTAMIAGYASFSDLVEARKLFDEMPEK----NAVSWNAIISGYVKCGD 283
Query: 129 RFEAFKLFEKMQ-------------STGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
A K+F++M S + P + S++SAC+ + +L+L K +V
Sbjct: 284 LRSARKMFDEMPHRNRDVVAWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVR 343
Query: 176 RADLNKDES-MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
++ ++ + + ALI M KCG A + F+ E+ D + +M+ G +G
Sbjct: 344 KSSIDVHRAHVIAALIDMNAKCGSMDRATKLFE--EMPKRDLISYCSMMQGLSIHGCGPQ 401
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
AV +F M E + P+ +F +L+AC AG VD+ F M D+ + P +H+ CMV
Sbjct: 402 AVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMV 461
Query: 295 DLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
DLLGR+GRL EA EL++ +P EP + +LLGAC H + +LGE +A +L E+EP+N
Sbjct: 462 DLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVADQLFELEPQNAG 521
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+V+LSNIYA +W DV +R + +R + K+PG S
Sbjct: 522 NYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCS 558
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 126/302 (41%), Gaps = 59/302 (19%)
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
+F G++ P WN+ I G+S+ LF +M+ + VP S++ AC+
Sbjct: 127 VFNGVS----SPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACS 182
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ----------- 208
+ +K G HG +R + D + T+LI +Y KCG+ AR+ FD+
Sbjct: 183 KVCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTA 242
Query: 209 -----------------FEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE----- 245
F+ P+ A WNA+ISGY + G+ SA ++FD M
Sbjct: 243 MIAGYASFSDLVEARKLFDEMPEKNAVSWNAIISGYVKCGDLRSARKMFDEMPHRNRDVV 302
Query: 246 --------KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP-----KQEHFGC 292
VKP+ V+++SAC G ++ A + DD+ K +
Sbjct: 303 AWSALISGNVKPDEFIMVSLMSACSQMGSLELAKWV-----DDYVRKSSIDVHRAHVIAA 357
Query: 293 MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
++D+ + G +D A +L E+P+ + Y S++ H G + M E
Sbjct: 358 LIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIH---GCGPQAVSLFSRMLNEGL 414
Query: 353 TP 354
TP
Sbjct: 415 TP 416
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/384 (33%), Positives = 214/384 (55%), Gaps = 10/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT ++ ++ C+ L GR++H + S + AL+DMY+K GCL A +
Sbjct: 145 PDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGVFGFS-LPVANALLDMYMKNGCLEEAVKL 203
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ SRNI++W +++G G+ +KA LF ++ + D W +MI+ Q G
Sbjct: 204 FEQMP-SRNIISWTILVSGYAFAGQLDKARVLF----YQCSEKDLIMWTAMINACVQHGC 258
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQ + P + ++L+ CA+L AL G+ H + + D + TA
Sbjct: 259 FEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTA 318
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + F+Q + + D W ++I G NG+ A+E+F+ M++ KVK
Sbjct: 319 LIDMYAKCGHVKKSMEVFEQMQGR--DTTAWTSIICGLATNGQAGRALELFEDMERSKVK 376
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VLSAC H G VD+ + F M D + + P+ EH+ C+V+LLGR+G LDEA +
Sbjct: 377 PDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEK 436
Query: 309 LIRELP--EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LIR++ + + ++ +LL AC N ++ E + ++ E + P +++SN+YA
Sbjct: 437 LIRDIQINKDAMPLFGALLTACKAQGNVEMSERLTKRIGEQGYQIPDVNLLMSNVYATAS 496
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWED R+R + + K G S
Sbjct: 497 RWEDAIRVRSKMAHPTIKKTAGCS 520
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T +++++ CA+L L G +H + + + D ++GTAL+DMY KCG + +
Sbjct: 275 EPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSME 334
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++G R+ W ++I G+ NG++ +A+ELFE + KPD T+ ++S G
Sbjct: 335 VFEQMQG-RDTTAWTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGG 393
Query: 128 MRFEAFKLFEKMQSTGMVP 146
+ E K F M+ +P
Sbjct: 394 LVDEGRKQFHAMKDVYRIP 412
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 153/383 (39%), Gaps = 73/383 (19%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S T+ V+ A L GR+ H +K D ++L+DMY
Sbjct: 45 DSFTYPFVLRAIGVLKLSVEGRKAHAAAMKTGFWWDAYTASSLMDMY------------- 91
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
L GR++ A +LF+ + H WN MI + + G
Sbjct: 92 -------------------TLLGRADVARKLFDEMPHRAL----VVWNMMIRCYVRCGRY 128
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A L E+M+ +G+ P + + ++ C+ L LG+ H + + +A AL
Sbjct: 129 TAAIALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAY-MDGVFGFSLPVANAL 187
Query: 190 ISMYMKCGQPSWARRFFDQ-----------------------------FEIKPDDPAFWN 220
+ MYMK G A + F+Q ++ D W
Sbjct: 188 LDMYMKNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWT 247
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
AMI+ ++G +E A+ +F MQ ++V+P+ + V +L+ C + G +D+ I D
Sbjct: 248 AMINACVQHGCFEEALSLFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDR 307
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
+K ++D+ + G + ++ E+ ++ + + S++ C N G +
Sbjct: 308 -KMKVDAVLGTALIDMYAKCGHVKKSMEVFEQMQGRDTTAWTSII--CGLATNGQAGRAL 364
Query: 341 A----MKLQEMEPENPTPFVILS 359
M+ +++P++ T +LS
Sbjct: 365 ELFEDMERSKVKPDSITFIGVLS 387
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 34/298 (11%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N +I ++ G ++ ++ G+V VL A L G++ H ++
Sbjct: 15 NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGRKAHAAAMK 74
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D A++L+ MY G+ AR+ FD E+ WN MI Y R G Y +A+
Sbjct: 75 TGFWWDAYTASSLMDMYTLLGRADVARKLFD--EMPHRALVVWNMMIRCYVRCGRYTAAI 132
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK-PKQEHF----- 290
+ + M++ + P+ + V ++ C AG + +I MD FG P
Sbjct: 133 ALAEEMERSGLTPDKVTLVTSVTVCSRAGDLSLGRRIHAYMDGVFGFSLPVANALLDMYM 192
Query: 291 --GC---------------------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
GC +V +G+LD+AR L + E + ++ +++ A
Sbjct: 193 KNGCLEEAVKLFEQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINA 252
Query: 328 CWCH--LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
C H L M++Q +EP+ T V L A LG + I Q DR++
Sbjct: 253 CVQHGCFEEALSLFREMQMQRVEPDRFT-IVTLLTCCANLGALDQGEWIHQFAVDRKM 309
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 221/390 (56%), Gaps = 11/390 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGC 61
L P+SVT +++I CASLL ++ +++H +++ + + +G A++D Y KCG
Sbjct: 450 LRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGN 509
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A+ +FQ L RN++T N++I+G + G A +F G++ + D TWN M+
Sbjct: 510 MEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHHDANMIFSGMS----ETDLTTWNLMVR 565
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+++ +A L ++Q+ GM P + S+L C ++++ L + G++IR+ K
Sbjct: 566 VYAENDCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMASVHLLSQCQGYIIRSCF-K 624
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + AL+ Y KCG A + F Q + D F AMI GY +G E A+ IF
Sbjct: 625 DLHLEAALLDAYAKCGIIGRAYKIF-QLSAEKDLVMF-TAMIGGYAMHGMSEEALWIFSH 682
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M + ++P+ F ++LSAC HAG VD+ L+IF ++ G+KP E + C+VDLL R G
Sbjct: 683 MLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKPTVEQYACVVDLLARGG 742
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
R+ EA L+ LP E +++ +LLGAC H +LG +A +L ++E + +++LSN
Sbjct: 743 RISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELGRIVANQLFKIEANDIGNYIVLSN 802
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+YA RW+ V +R+M+ ++ L K G S
Sbjct: 803 LYAADARWDGVMEVRRMMRNKDLKKPAGCS 832
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 130/270 (48%), Gaps = 42/270 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNSVT +V+ CA L L G+ VHG +K DT+ G ALV MY KCG +
Sbjct: 144 PNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLV------ 197
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
S A +F+ +A++ D +WN+MI+G ++ +
Sbjct: 198 -------------------------SHDAYAVFDNIAYK----DVVSWNAMIAGLAENRL 228
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS---ALKLGKETHGHVIR-ADLNKDES 184
+AF LF M P+ V ++L CA A G++ H +V++ +L+ D S
Sbjct: 229 VEDAFLLFSSMVKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVS 288
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQ 243
+ ALIS+Y+K GQ A F + + D WNA I+GY NGE+ A+ +F +L
Sbjct: 289 VCNALISLYLKVGQMREAEALF--WTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLAS 346
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQI 273
E + P+S + V++L AC ++ QI
Sbjct: 347 LETLLPDSVTMVSILPACAQLKNLKVGKQI 376
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 116/258 (44%), Gaps = 41/258 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +++ +C++LL GR +HG +K S + L++MY KCG L
Sbjct: 40 KPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLV---- 95
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ ++LF+ L+H DP WN ++SGFS
Sbjct: 96 ----------------------------ECLKLFDQLSH----CDPVVWNIVLSGFSGSN 123
Query: 128 -MRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ ++F M S+ +P+ V +VL CA L L GK HG+VI++ ++D
Sbjct: 124 KCDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLG 183
Query: 186 ATALISMYMKCGQPSW-ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+SMY KCG S A FD K D WNAMI+G N E A +F M +
Sbjct: 184 GNALVSMYAKCGLVSHDAYAVFDNIAYK--DVVSWNAMIAGLAENRLVEDAFLLFSSMVK 241
Query: 245 EKVKPNSASFVAVLSACG 262
+PN A+ +L C
Sbjct: 242 GPTRPNYATVANILPVCA 259
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 48/364 (13%)
Query: 8 EPNSVTFISVISACASL---LYLQFGRQVHGLTLKI-EKQSDTMIGTALVDMYLKCGCLP 63
PN T +++ CAS + GRQ+H L+ E +D + AL+ +YLK G +
Sbjct: 245 RPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMR 304
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F W ++ R D TWN+ I+G+
Sbjct: 305 EAEALF-----------WT-------MDAR------------------DLVTWNAFIAGY 328
Query: 124 SQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNK 181
+ G +A LF + S ++P + S+L ACA L LK+GK+ H ++ R L
Sbjct: 329 TSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFY 388
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D ++ AL+S Y KCG A F +K D WN++ +G + + +
Sbjct: 389 DTAVGNALVSFYAKCGYTEEAYHTFSMISMK--DLISWNSIFDAFGEKRHHSRFLSLLHC 446
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI--FTMMDDDFGLKPKQEHFGCMVDLLGR 299
M + +++P+S + +A++ C V+K +I +++ ++D +
Sbjct: 447 MLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSK 506
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G ++ A ++ + L E V + L + + L S + M M + T + ++
Sbjct: 507 CGNMEYANKMFQNLSEKRNLVTCNSLISGYVGLGSH--HDANMIFSGMSETDLTTWNLMV 564
Query: 360 NIYA 363
+YA
Sbjct: 565 RVYA 568
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGL--AHEGFKPDPATWNSMISGFSQLGMRFEAF 133
R+ TW ++I + L + +A+ LF HE FKPD
Sbjct: 4 RDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTV------------------ 45
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
+ ++L +C+ L A LG+ HG+V++ L++MY
Sbjct: 46 -----------------LAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMY 88
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY-GRNGEYESAVEIFDLMQQEK-VKPNS 251
KCG + FDQ + DP WN ++SG+ G N + +F +M + PNS
Sbjct: 89 AKCGMLVECLKLFDQ--LSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNS 146
Query: 252 ASFVAVLSACGHAGHVD 268
+ VL C G +D
Sbjct: 147 VTVATVLPVCARLGDLD 163
>gi|297806919|ref|XP_002871343.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317180|gb|EFH47602.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/385 (36%), Positives = 217/385 (56%), Gaps = 8/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF + +A AS + R +H + +SD+ TAL+ Y K G L CA
Sbjct: 79 RPNHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTALITAYAKLGALCCARR 138
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ +R++ WN MI G G + AMELF+ + ++ + +W ++ISGFSQ G
Sbjct: 139 VFDEM-SNRDVPVWNAMITGYQRRGDMKAAMELFDSMPNK----NVTSWTTVISGFSQNG 193
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA +F M+ V P+ + SVL ACA+L L++G+ G+ + +
Sbjct: 194 NYSEALTMFLCMEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYARENGFFDNIYVR 253
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A + MY KCG A+R FD+ + + + WN+MI +G+++ A+E++ M QE
Sbjct: 254 NATLEMYSKCGMIDVAKRLFDEIGNQRNLIS-WNSMIGSLATHGKHDEALELYAQMLQEG 312
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+P++ +FV +L AC H G V K ++ M++ + PK EH+GCM+DLLGR G+L EA
Sbjct: 313 ERPDAVTFVGLLLACVHGGMVLKGKELLKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEA 372
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI+ +P +P V+ +LLGAC H N ++ E + L ++EP NP VI+SNIYA
Sbjct: 373 CDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKLEPTNPGNCVIMSNIYAAN 432
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V R+R+++ +TK G S
Sbjct: 433 EKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 146/308 (47%), Gaps = 18/308 (5%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M++ S +PN +T +SV+ ACA+L L+ GR++ G + + + A ++MY KCG
Sbjct: 205 MEKDKSVKPNHITLVSVLPACANLGELEIGRRLEGYARENGFFDNIYVRNATLEMYSKCG 264
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A +F E+ RN+++WN+MI + +G+ ++A+EL+ + EG +PD T+ ++
Sbjct: 265 MIDVAKRLFDEIGNQRNLISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLL 324
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIR 176
GM + +L + M+ + P L+ C+ +L L +E +
Sbjct: 325 LACVHGGMVLKGKELLKSMEEVHKISPKLEHYGCMIDLLGRVGKL------QEACDLIKT 378
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESA 235
+ D + L+ G A + +++P +P M + Y N +++
Sbjct: 379 MPMKPDAVVWGTLLGACSFHGNVEIAEIASEALMKLEPTNPGNCVIMSNIYAANEKWDGV 438
Query: 236 VEIFDLMQQEKV-KPNSASFVAVLSACGHAGHVD-----KALQIFTMMDD-DFGLKPKQE 288
+ + LM++E + K S+ H V+ ++ +I+ ++D+ +KP++
Sbjct: 439 LRMRKLMKKETMTKAAGYSYFVEAGVEVHKFTVEDKSHPRSYEIYQVLDEISRRMKPEKS 498
Query: 289 HFGCMVDL 296
F M+ L
Sbjct: 499 RFDSMLQL 506
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
+N +I +S E+ L+ + G+ P+ + +A A S+ + + H
Sbjct: 50 YNKLIQSYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHSQFF 109
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
R+ D TALI+ Y K G ARR FD E+ D WNAMI+GY R G+ ++A
Sbjct: 110 RSGFESDSFCCTALITAYAKLGALCCARRVFD--EMSNRDVPVWNAMITGYQRRGDMKAA 167
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+E+FD M + N S+ V+S G+ +AL +F M+ D +KP ++
Sbjct: 168 MELFDSMPNK----NVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVSVLP 223
Query: 296 LLGRSGRLDEAREL 309
G L+ R L
Sbjct: 224 ACANLGELEIGRRL 237
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 138/293 (47%), Gaps = 12/293 (4%)
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
I +N +I ++ + +++ L+ L+ +G +P+ T+N + + + L
Sbjct: 47 IFLYNKLIQSYSVHHQPHESIVLYNLLSFDGIRPNHHTFNFIFAASASFSSARPLRLLHS 106
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+ +G C T++++A A L AL + V N+D + A+I+ Y + G
Sbjct: 107 QFFRSGFESDSFCCTALITAYAKLGALCCARR----VFDEMSNRDVPVWNAMITGYQRRG 162
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVA 256
A FD K + W +ISG+ +NG Y A+ +F M+++K VKPN + V+
Sbjct: 163 DMKAAMELFDSMPNK--NVTSWTTVISGFSQNGNYSEALTMFLCMEKDKSVKPNHITLVS 220
Query: 257 VLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL-PE 315
VL AC + G ++ ++ ++ G +++ + G +D A+ L E+ +
Sbjct: 221 VLPACANLGELEIGRRLEGYAREN-GFFDNIYVRNATLEMYSKCGMIDVAKRLFDEIGNQ 279
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFV--ILSNIYAGL 365
+ ++S++G+ H D E+ A LQE E + FV +L+ ++ G+
Sbjct: 280 RNLISWNSMIGSLATHGKHDEALELYAQMLQEGERPDAVTFVGLLLACVHGGM 332
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/384 (33%), Positives = 214/384 (55%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T S++SAC+ L L+ G++VHG ++ + D + +++ +Y+ CG L +
Sbjct: 849 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 908
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +K++ +WN++I+G+ Q G
Sbjct: 909 FDAME---------------------DKSL---------------VSWNTVITGYLQNGF 932
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F +M G+ + V AC+ L +L+LG+E H + ++ L D +A +
Sbjct: 933 PDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACS 992
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY K G + + + F+ +K A WNAMI GYG +G + A+++F+ MQ+
Sbjct: 993 LIDMYAKNGSITQSSKVFNG--LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 1050
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC H+G + + L+ M FGLKP +H+ C++D+LGR+G+LD+A
Sbjct: 1051 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 1110
Query: 309 LIRE--LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
++ E E V ++ SLL +C H N ++GE++A KL E+EPE P +V+LSN+YAGLG
Sbjct: 1111 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 1170
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+WEDV ++RQ +N+ L K G S
Sbjct: 1171 KWEDVRKVRQRMNEMSLRKDAGCS 1194
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 154/373 (41%), Gaps = 75/373 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ VI ACA + + G VHGL +K D +G ALV Y
Sbjct: 540 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY------------ 587
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
G+ +T A++LF+ + +WNSMI FS G
Sbjct: 588 -----GTHGFVT---------------DALQLFDIMPERNL----VSWNSMIRVFSDNGF 623
Query: 129 RFEAFKLF-EKMQSTG---MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E+F L E M+ G +P + + +VL CA + LGK HG ++ L+K+
Sbjct: 624 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 683
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ AL+ MY KCG + A+ F K + WN M+ G+ G+ FD+++Q
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEGDTHGT---FDVLRQ 738
Query: 245 -----EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHF------G 291
E VK + + + + C H + K L +++ KQE
Sbjct: 739 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL---------KQEFVYNELVAN 789
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD-----LGEEMAMKLQE 346
V + G L A+ + + TV+ +++L+G H S+ L + MK+
Sbjct: 790 AFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG---HAQSNDPRLSLDAHLQMKISG 846
Query: 347 MEPENPTPFVILS 359
+ P++ T +LS
Sbjct: 847 LLPDSFTVCSLLS 859
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 53/271 (19%)
Query: 7 DEPNSVTFISVISACASLLY-------LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLK 58
DE +S F+ V A LL ++ GR++H L + ++D ++ T ++ MY
Sbjct: 428 DESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAM 487
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
CG + VF L+ S+N+ WN +
Sbjct: 488 CGSPDDSRFVFDALR-SKNLFQWN-----------------------------------A 511
Query: 119 MISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+IS +S+ + E + F E + +T ++P V+ ACA +S + +G HG V++
Sbjct: 512 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 571
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAV 236
L +D + AL+S Y G + A + FD I P+ + WN+MI + NG E +
Sbjct: 572 GLVEDVFVGNALVSFYGTHGFVTDALQLFD---IMPERNLVSWNSMIRVFSDNGFSEESF 628
Query: 237 EIFDLMQQEK----VKPNSASFVAVLSACGH 263
+ M +E P+ A+ V VL C
Sbjct: 629 LLLGEMMEENGDGAFMPDVATLVTVLPVCAR 659
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 154 VLSACADLSALKLGKETHGHVI-RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+L A +++G++ H V L D+ + T +I+MY CG P +R FD K
Sbjct: 445 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WNA+IS Y RN Y+ +E F +++ + P+ ++ V+ AC V L
Sbjct: 505 --NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGL 562
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ ++ GL +V G G + +A +L +PE + ++S++
Sbjct: 563 AVHGLVVKT-GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI-----R 616
Query: 332 LNSDLG--EEMAMKLQEMEPEN 351
+ SD G EE + L EM EN
Sbjct: 617 VFSDNGFSEESFLLLGEMMEEN 638
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 214/387 (55%), Gaps = 40/387 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT +++SACA L L G ++H +++ + ++G+ALV+MY KCG L A V
Sbjct: 178 PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +L S+K D W+++I G+ +
Sbjct: 238 FDQL---------------------SDK---------------DVYAWSALIFGYVKNNR 261
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF ++ + M P+ + +V+SACA L L+ G+ H ++ R S+
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN 321
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI M+ KCG A+R FD K D WN+M++G +G A+ F LMQ +
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYK--DLISWNSMVNGLALHGLGREALAQFHLMQTTDL 379
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ VL+AC HAG V + ++F ++ +G++ K EH+GCMVDLL R+G L EAR
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P +P +++ S+LGAC + N +LGEE A L E+EP N +++LSNIYA
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRK 499
Query: 367 RWEDVGRIRQMINDRQLTKLPGISAGI 393
W +V ++R+++N++ + K PG S+ +
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVV 526
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 164/351 (46%), Gaps = 51/351 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF S++ CA LL + G+ +HG +K SD I T L++MY CG L A +
Sbjct: 77 PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + G RN + W +MI+G M N +A+ L++ + +GF PD T
Sbjct: 137 FERM-GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT------------- 182
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +++SACA+L L +G + H H+ D+ + +A
Sbjct: 183 ----------------------MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKV 247
L++MY KCG AR+ FDQ K D W+A+I GY +N A+++F ++ +
Sbjct: 221 LVNMYAKCGDLKTARQVFDQLSDK--DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRL 303
+PN + +AV+SAC G ++ + D+ + ++ H ++D+ + G +
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWV-----HDYITRTQKGHSVSLNNSLIDMFSKCGDI 333
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D A+ + + + ++S++ H LG E + M+ + P
Sbjct: 334 DAAKRIFDSMSYKDLISWNSMVNGLALH---GLGREALAQFHLMQTTDLQP 381
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D TWNSM+ F M A + + E ++ + VP S+L CA L K+GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG V++ L+ D + T L++MY CG AR F++ + + W +MISGY +N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR--NKVVWTSMISGYMKNH 159
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
A+ ++ M+++ P+ + ++SAC + +++ + + + +K
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI-REMDMKICAVLG 218
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+V++ + G L AR++ +L + V + +L+
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALI 253
>gi|297744558|emb|CBI37820.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 8/350 (2%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
K+ DT+ ++ Y++ + A +FQE+ + LTWN+MI+G G E A LF
Sbjct: 154 KERDTISWNTMISGYVRMSDMEEAWMLFQEMPNP-DTLTWNSMISGFAQKGNLELARALF 212
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
+ + +WNSMI+G+ G A +L+ +M G P ++SVLS C+
Sbjct: 213 ATIPQKNL----VSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGF 268
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+AL LG + H + + + D + +LI+MY +CG AR FD+ +++ + + WNA
Sbjct: 269 AALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVIS-WNA 326
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI GY +G A+E+F+LM++ KV+P +F++VL+AC HAG V + F M +F
Sbjct: 327 MIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEF 386
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEM 340
G++P+ EHF +VD++GR G+L+EA +LI +P EP +V+ +LLGAC H N +L
Sbjct: 387 GIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVA 446
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A L ++EPE+ P+V+L N+YA +G+W++ +R M+ + K PG S
Sbjct: 447 AEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYS 496
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ T SV+S C+ L G Q+H K D I +L+ MY +CG + A
Sbjct: 251 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT-VIPDIPINNSLITMYSRCGAIVEAR 309
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+K + +++WN MI G +G + A+ELFE + +P T+ S+++ +
Sbjct: 310 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 369
Query: 127 GMRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E F+ M G+ P ++ S++ L +E + D+++
Sbjct: 370 GFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQL---EEAMDLINSMPFEPDKAV 426
Query: 186 ATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ AR + +++P+ A + + + Y G++++A E+ +M++
Sbjct: 427 WGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMER 486
Query: 245 EKVK 248
++
Sbjct: 487 NNIR 490
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLA-HEG-------FKPDPATWNSMISGFSQLGMR 129
+ +N ++AG NGR +KA +LF+ + ++G F+ + +WNSMI + +
Sbjct: 84 VHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDI 143
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
F A LF++M+ + ++ + A L +E N D ++
Sbjct: 144 FSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMP--------NPDTLTWNSM 195
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
IS + + G AR F I + WN+MI+GY NG+Y+ A E++ M + KP
Sbjct: 196 ISGFAQKGNLELARALFAT--IPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKP 253
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ + +VLS C + +QI + + P ++ + R G + EAR +
Sbjct: 254 DRHTLSSVLSVCSGFAALHLGMQIHQQITKT--VIPDIPINNSLITMYSRCGAIVEARTI 311
Query: 310 IRELP-EPTVSVYHSLLGACWCH 331
E+ + V +++++G H
Sbjct: 312 FDEVKLQKEVISWNAMIGGYAFH 334
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN+++WN M+ G + NG E+A+E F + D A+ +++++G Q G EA ++
Sbjct: 14 RNVVSWNAMVTGFLQNGDVERAIEFFMRMPER----DSASLSALVAGLIQNGELDEAKRI 69
Query: 136 F--EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--------LNKDESM 185
+ Q + +L+ + ++ + D ++
Sbjct: 70 LLTSRRQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVS 129
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
++I Y+K AR FDQ +K D WN MISGY R + E A +F QE
Sbjct: 130 WNSMIMCYVKARDIFSARVLFDQ--MKERDTISWNTMISGYVRMSDMEEAWMLF----QE 183
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRL 303
P++ ++ +++S G+++ A +F + P++ + M+ +G
Sbjct: 184 MPNPDTLTWNSMISGFAQKGNLELARALFATI-------PQKNLVSWNSMIAGYENNGDY 236
Query: 304 DEARELIREL----PEPTVSVYHSLLGAC 328
A EL R++ +P S+L C
Sbjct: 237 KGATELYRQMLLQGEKPDRHTLSSVLSVC 265
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 32/314 (10%)
Query: 95 EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSV 154
++A++LF+ + + +WN+M++GF Q G A + F +M SL + +
Sbjct: 2 DEALQLFDSMQER----NVVSWNAMVTGFLQNGDVERAIEFFMRMPERD-SASLSALVAG 56
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESM--ATALISMYMKCGQPSWARRFFDQFEI- 211
L +L K T R D +K + + L++ Y + G+ AR+ FDQ
Sbjct: 57 LIQNGELDEAKRILLTSR---RQDDDKGDLVHAYNILLAGYGQNGRVDKARQLFDQIPFY 113
Query: 212 ---KPDDPAF------WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
+ D F WN+MI Y + + SA +FD M++ ++ S+ ++S
Sbjct: 114 DGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKER----DTISWNTMISGYV 169
Query: 263 HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
+++A +F M + P + M+ + G L+ AR L +P+ + ++
Sbjct: 170 RMSDMEEAWMLFQEMPN-----PDTLTWNSMISGFAQKGNLELARALFATIPQKNLVSWN 224
Query: 323 SLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIND 380
S++ + + E+ M LQ +P+ T +LS + +G +I Q I
Sbjct: 225 SMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLS-VCSGFAALHLGMQIHQQITK 283
Query: 381 RQLTKLPGISAGIT 394
+ +P ++ IT
Sbjct: 284 TVIPDIPINNSLIT 297
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 6/380 (1%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V + ++ ACA + G+Q+H + LK + + LV Y CG + A F+
Sbjct: 278 VLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQMTFR- 336
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L + +WN ++A ++ NG +A ELF+ + D +W++MISG+ Q G
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPER----DTVSWSTMISGYVQTGRSDM 392
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A KLF M +T + P+ + S LSA AD L GK H +++ + +++++ LI
Sbjct: 393 ALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLID 452
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG + A +FF++ K + WNAMI +G ++++F +Q+ +KPNS
Sbjct: 453 MYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNS 512
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ VLSAC HAG V K F M ++G++P +H+GCMVDLLGR+G L+EA +L+
Sbjct: 513 ITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+P +P V ++ S+L A N LGE A +L +++ + + LSNIYA G W +
Sbjct: 573 MMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWTN 632
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V +R+ + D L +L G S
Sbjct: 633 VSVVRKELQDANLERLTGRS 652
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EPN VT S +SA A L G+ +H + Q + + L+DMY KCG + A
Sbjct: 404 SIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADA 463
Query: 66 HNVFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
F + ++ WN MI + ++G + +++LF L KP+ T+ ++S
Sbjct: 464 VQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACC 523
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK 149
G + FE M + G+ P++K
Sbjct: 524 HAGTVTKGKYYFESMTREYGIQPTIK 549
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 120/285 (42%), Gaps = 14/285 (4%)
Query: 27 LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKC-GCLPCAHNVFQELKGS-RNILTWNT 83
L+ G Q+H L K S+ + +++ Y + L A +F E R+ N+
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
++A + G ++A L E + D ++ ++++ F++ G A +F M S
Sbjct: 82 ILAALTRAGHLDRAQGLLEEMPR--IHRDAVSYTTLVTAFARAGHAARAVAVFRSMLSEN 139
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+VP+ + ++A A A HG ++ L+ +AT L+ Y + AR
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
FD + + WN M++GY + + A E+F + + + S++ ++
Sbjct: 200 ALFDGMTHR--NTVTWNVMLNGYVKAKMIDMAAEVFWRIPER----DEVSWLTLIDGYIC 253
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
A + A++ + M + G ++ +VDL+ R E
Sbjct: 254 ADLISDAMKAYVQMVGEVG---ANDYEVLLVDLMKACARYSAVTE 295
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 210/384 (54%), Gaps = 8/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ V +V+SAC L L + +H K + D + + L+ Y +CG L A+
Sbjct: 190 PDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRF 249
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQE +NI+ WNTMI + + E +LF+ + D +WNSMI GF+++G
Sbjct: 250 FQETP-MKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR----DVVSWNSMIGGFARIGQ 304
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA F +M+ +G+ P+ + S LSACA AL G H +V + D+N+D S+ ++
Sbjct: 305 YQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSS 364
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A + F+ E D W +++ G +G E A+ F M++ +V+
Sbjct: 365 LIDMYSKCGDIDKAVQIFE--ESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQ 422
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ + V VLSAC HAG +D+ F M+ FGL PK EH+G MVDLLGR G L EA +
Sbjct: 423 PDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYD 482
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI +P E ++ + L AC H N +LGE A +L + P +P V+LSN+YA +
Sbjct: 483 LIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAK 542
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ +R+ I + L K PG S+
Sbjct: 543 WDRSMGLRKEIKKKGLKKSPGCSS 566
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 161/390 (41%), Gaps = 69/390 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF+ ++ A S ++ G +VH ++ + AL+ Y+ CG +
Sbjct: 88 RPNGHTFMYLLKALVSGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQ 147
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E++ ++ W +I + EKA+ELF + G PD
Sbjct: 148 VFDEMR-QPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD--------------- 191
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ V++V+SAC L L + K H + ++ + D +++
Sbjct: 192 --------------------MVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSS 231
Query: 188 ALISMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPAF 218
LIS Y +CG +A RFF + F+ PD D
Sbjct: 232 TLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVS 291
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN+MI G+ R G+Y+ A+ F M+ V PN+ + ++ LSAC G +D I +D
Sbjct: 292 WNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVD 351
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+ + ++D+ + G +D+A ++ E + + S++ H +
Sbjct: 352 KN-DMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410
Query: 339 EMAMKLQE--MEPENPTPFVILSN-IYAGL 365
K++E ++P++ T +LS +AGL
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGL 440
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQS--TGMVPSLKCVTSVLSACADLSALKLGKETHG 172
WN+MI + G+ L MQ G+ P+ +L A +K G+E H
Sbjct: 56 VWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHA 115
Query: 173 HVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY 232
V+R E ++ AL+ Y+ CG R+ FD E++ W +I Y
Sbjct: 116 SVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFD--EMRQPGLVLWTLIIRAYVCVTFP 173
Query: 233 ESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHF 290
E A+E+F M++ + P+ + V+SACG G V KA+ F + G++
Sbjct: 174 EKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFI---EKSGIEVDAFVS 230
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
++ G G LD A +E P + V+++++ H N +LG+++ Q M
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQL---FQSMPDR 287
Query: 351 NPTPFVILSNIYAGLGRWED 370
+ + + +A +G++++
Sbjct: 288 DVVSWNSMIGGFARIGQYQE 307
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 209/380 (55%), Gaps = 39/380 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+ +S IS+C+ L+ L+ GR H ++K D+ + L+ MY +CG A +F
Sbjct: 426 SLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIF--- 482
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
GLA K D TWN++IS ++ LG A
Sbjct: 483 ------------------------------GLAK--LKGDVVTWNTLISSYAHLGHSNTA 510
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
L+++M + G+ P+ + +V+SACA+L AL+ G++ H +V + D S+ TALI M
Sbjct: 511 VSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDM 570
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCGQ ARR FD + D WN MISGYG +GE + A+E+F M+ +KPN
Sbjct: 571 YAKCGQLGTARRIFDS--MLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGV 628
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F+A+LSAC H+G +++ Q+FT M + L+P +H+ CMVDLLG+SG L EA +++
Sbjct: 629 TFLAILSACCHSGLLEEGRQLFTRM-GKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLA 687
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP ++ +LL AC H + ++G +A K + EN ++++SN Y +W+++
Sbjct: 688 MPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEI 747
Query: 372 GRIRQMINDRQLTKLPGISA 391
++R+ + + + K G SA
Sbjct: 748 EKLREAMKNHGVQKGAGWSA 767
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 37/354 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ V ++S + + G+ H + +K + ++G AL+ MY K + A
Sbjct: 317 QPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGR 376
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L R+ +WN MI G G K +EL+ + NS++S
Sbjct: 377 VFRLLH-QRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSA----- 430
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+S+C+ L L+LG+ H + I+ L++D S+A
Sbjct: 431 ---------------------------ISSCSRLVELRLGRSAHCYSIKHWLDEDSSVAN 463
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI MY +CG+ A + F ++K D WN +IS Y G +AV ++D M E +
Sbjct: 464 VLIGMYGRCGKFDHACKIFGLAKLK-GDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGL 522
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PNS + + V+SAC + +++ +I + + + G ++D+ + G+L AR
Sbjct: 523 TPNSTTLITVISACANLVALERGEKIHSYV-KEMGWDYDVSINTALIDMYAKCGQLGTAR 581
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--EMEPENPTPFVILS 359
+ + + V ++ ++ H + E+ K++ ++P T ILS
Sbjct: 582 RIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILS 635
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T I+VISACA+L+ L+ G ++H ++ D I TAL+DMY KCG L A +
Sbjct: 524 PNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRI 583
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++ WN MI+G ++G +++A+ELF + KP+ T+ +++S G+
Sbjct: 584 FDSML-QHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGL 642
Query: 129 RFEAFKLFEKMQSTGMVPSLK 149
E +LF +M + P+LK
Sbjct: 643 LEEGRQLFTRMGKYSLEPNLK 663
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
Query: 103 GLAHEGF----KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
GLA F +PD WNS+I A +M ++ PS V SA
Sbjct: 61 GLAALAFSACPRPDAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAA 120
Query: 159 ADLSALKLGKETHGHVIRADL----NKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
A+L AL +G H + +R L ++ ++L+ MY +CG A + F+ E++
Sbjct: 121 AELGALGVGASVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFE--EMRER 178
Query: 215 DPAFWNAMISGYGRNGE----YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD-- 268
D W A++SG RNGE VE+ L K +PNS + + L ACG ++
Sbjct: 179 DVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSG 238
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA- 327
+ L + + G+ + + + ++A L ELPE V + SL+G
Sbjct: 239 RCLHGYAV---KVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIY 295
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
CW L + E M + + ME V++S + +GLG +V
Sbjct: 296 CWRGL---IREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNV 336
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 48 IGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE 107
+ ++LV MY +CG + A +F+E++ R+++ W +++G + NG
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMR-ERDVVAWTAVVSGCVRNGECGD----------- 198
Query: 108 GFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG---MVPSLKCVTSVLSACADLSAL 164
G+R+ L E ++ G P+ + + S L AC L L
Sbjct: 199 -------------------GLRY----LVEMVRLAGDGKARPNSRTMESGLEACGVLDEL 235
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G+ HG+ ++ + + +AL SMY KC A F E+ D W ++I
Sbjct: 236 NSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFP--ELPEKDVVSWTSLIG 293
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFG 282
Y G A+E+F M + ++P+ +LS G++G+V KA +M +FG
Sbjct: 294 IYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHA-VIMKRNFG 352
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/387 (36%), Positives = 206/387 (53%), Gaps = 43/387 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF SVI +CA L L+ G+ VH + DT + ALV Y KCG + A V
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + EK++ WNS++SGF Q G+
Sbjct: 165 FDRMP---------------------EKSI---------------VAWNSLVSGFEQNGL 188
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F +M+ +G P S+LSACA A+ LG H ++I L+ + + TA
Sbjct: 189 ADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTA 248
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KV 247
LI++Y +CG AR FD+ +K + A W AMIS YG +G + AVE+F+ M+ +
Sbjct: 249 LINLYSRCGDVGKAREVFDK--MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGP 306
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +FVAVLSAC HAG V++ ++ M + L P EH CMVD+LGR+G LDEA
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Query: 308 ELIREL----PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ I +L +++ ++LGAC H N DLG E+A +L +EP+NP V+LSNIYA
Sbjct: 367 KFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+ ++V IR + L K G S
Sbjct: 427 LSGKTDEVSHIRDGMMRNNLRKQVGYS 453
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 147/286 (51%), Gaps = 16/286 (5%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD +NS+I S+L + + +M S+ + PS TSV+ +CADLSAL++GK
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H + + D + AL++ Y KCG AR+ FD+ K WN+++SG+ +NG
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEK--SIVAWNSLVSGFEQNG 187
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A+++F M++ +P+SA+FV++LSAC G V + + + GL +
Sbjct: 188 LADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLG 246
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME-- 348
+++L R G + +ARE+ ++ E V+ + +++ A H G++ +ME
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH---GYGQQAVELFNKMEDD 303
Query: 349 ----PENPTPFVILSN-IYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
P N T +LS +AGL E ++M +L +PG+
Sbjct: 304 CGPIPNNVTFVAVLSACAHAGLVE-EGRSVYKRMTKSYRL--IPGV 346
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S TF+S++SACA + G VH + + +GTAL+++Y +CG + A
Sbjct: 205 EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKARE 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQL 126
VF ++K + N+ W MI+ +G ++A+ELF + + G P+ T+ +++S +
Sbjct: 265 VFDKMKET-NVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ E ++++M +S ++P G E H
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIP--------------------GVEHH-------------- 349
Query: 186 ATALISMYMKCGQPSWARRFFDQFEI--KPDDPAFWNAMISGYGRNGEYESAVEI 238
++ M + G A +F Q + K PA W AM+ + Y+ VEI
Sbjct: 350 -VCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEI 403
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 209/380 (55%), Gaps = 6/380 (1%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V + ++ ACA + G+Q+H + LK + + LV Y CG + A F+
Sbjct: 278 VLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQMTFR- 336
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L + +WN ++A ++ NG +A ELF+ + D +W++MISG+ Q G
Sbjct: 337 LSDKSHTASWNALLAALLRNGLIREARELFDDMPER----DTVSWSTMISGYVQTGRSDM 392
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A KLF M +T + P+ + S LSA AD L GK H +++ + +++++ LI
Sbjct: 393 ALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLID 452
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG + A +FF++ K + WNAMI +G ++++F +Q+ +KPNS
Sbjct: 453 MYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNS 512
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+F+ VLSAC HAG V K F M ++G++P +H+GCMVDLLGR+G L+EA +L+
Sbjct: 513 ITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 312 ELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
+P +P V ++ S+L A N LGE A +L +++ + + LSNIYA G W +
Sbjct: 573 MMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNIYADAGHWIN 632
Query: 371 VGRIRQMINDRQLTKLPGIS 390
V +R+ + D L +L G S
Sbjct: 633 VSVVRKELQDANLERLTGRS 652
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S EPN VT S +SA A L G+ +H + Q + + L+DMY KCG + A
Sbjct: 404 SIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDMYAKCGSIADA 463
Query: 66 HNVFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
F + ++ WN MI + ++G + +++LF L KP+ T+ ++S
Sbjct: 464 VQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPNSITFIGVLSACC 523
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLK 149
G + FE M + G+ P++K
Sbjct: 524 HAGTVTKGKYYFESMTREYGIQPTIK 549
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 166/434 (38%), Gaps = 72/434 (16%)
Query: 27 LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKC-GCLPCAHNVFQELKGS-RNILTWNT 83
L+ G Q+H L K S+ + +++ Y + L A +F E R+ N+
Sbjct: 22 LRCGEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNS 81
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
++A + G ++A L E + D ++ ++++ F++ G A +F M S
Sbjct: 82 VLAALTRAGYLDRAQGLLEEMPR--IHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSEN 139
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
+VP+ + ++A A A HG ++ L+ +AT L+ Y + AR
Sbjct: 140 VVPNEATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSAR 199
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF---------------------DLM 242
FD + + WN M++GY + + A E+F DL+
Sbjct: 200 ALFDGMTYR--NTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLI 257
Query: 243 QQE---------KVKPNSAS--FVAVLSACGHAGHVDKALQIFTMM-----DDDFGLKPK 286
+V N V ++ AC V + Q+ T++ D ++
Sbjct: 258 SDAMKAYVQMVGEVGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQAT 317
Query: 287 QEHF-GC------------------------MVDLLGRSGRLDEARELIRELPEPTVSVY 321
HF GC ++ L R+G + EAREL ++PE +
Sbjct: 318 LVHFYGCCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSW 377
Query: 322 HSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
+++ SD+ ++ +M +EP T LS I A G + I I
Sbjct: 378 STMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAI-ADSGTLDQGKWIHDYIM 436
Query: 380 DRQLTKLPGISAGI 393
+R + +S+G+
Sbjct: 437 NRPVQLTDNLSSGL 450
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 212/390 (54%), Gaps = 20/390 (5%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQV------HGLTLKIEKQSDTMIGTALVDMY 56
+ ++ +SVT + ISA L + G + HG+ + D +G L+DMY
Sbjct: 206 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVV------DLYLGNTLIDMY 259
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G + A VF ++K +NI++WN MI G G A +LF + D +W
Sbjct: 260 GRRGMIDFAGRVFYQMK-EKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSR----DVISW 314
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
SMI G+S EA KLF++M + + P V + LSACA L +L G+ H ++ +
Sbjct: 315 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK 374
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D+ D + +LI MY KCG A + F+ ++K D W ++ISG NG ESA+
Sbjct: 375 HDIKSDVFVGNSLIDMYCKCGVVEKALQVFN--DMKTRDSVSWTSIISGLAVNGFAESAL 432
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+FD M +E + P +FV VL AC H G VDK ++ F M++ + L P+ +H+GC+VDL
Sbjct: 433 NVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDL 492
Query: 297 LGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
L RSG LD A I+++P P V ++ LL AC H N L E ++ KL ++P N +
Sbjct: 493 LCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNY 552
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
V+ S+ YAG RW+DV +IR+++ L K
Sbjct: 553 VLSSSTYAGSDRWDDVIKIRKLMEVTNLQK 582
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 7/257 (2%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+TFI + +CA + ++ G+ V ++K+ +S + AL+ MY+ G L A VF
Sbjct: 114 LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDG 173
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ R++++WN++I G R +K ++LF + + D T IS L
Sbjct: 174 ML-ERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEM 232
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
L + + G+V L +++ D+ + + G V K+ A+I
Sbjct: 233 GDYLVKYIDEHGVVVDLYLGNTLI----DMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIM 288
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y K G A++ F+ E+ D W +MI GY ++ AV++F M VKP+
Sbjct: 289 GYAKVGNLVAAKKLFN--EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDE 346
Query: 252 ASFVAVLSACGHAGHVD 268
+ LSAC H G +D
Sbjct: 347 ITVATALSACAHLGSLD 363
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P WN MI G S+ +A + M G+ S + +CA +S ++ G+
Sbjct: 75 RPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQM 134
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++ ++ ALI MY+ G+ + A++ FD + D WN++I GY +
Sbjct: 135 VRVHSMKLGFESYLFVSNALIHMYVCFGELAMAQKVFDG--MLERDVVSWNSIICGYYQF 192
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
++ +++F MQ V+ +S + + +SA + + +D+ G+
Sbjct: 193 NRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEH-GVVVDLYL 251
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ GR G +D A + ++ E + +++++
Sbjct: 252 GNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMI 287
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 157 ACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
A ++ ++L KE H ++RA ++ D S + +I Y Q S + F +I+
Sbjct: 20 AISNSTSLNSIKELHAQLVRAQMHIDPSSISEVIKHYALSPQ-SLPKAHFVFNQIQRPTL 78
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
WN MI G ++ A+ ++ M + ++ + +F+ + +C V
Sbjct: 79 LVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDV 129
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/414 (33%), Positives = 215/414 (51%), Gaps = 38/414 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P S TF S++ AC + ++ G+ VH K +S + TALVD Y K L A V
Sbjct: 233 PTSYTFSSLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKV 292
Query: 69 FQEL------------------------------KGSRNILTWNTMIAGMMLNGRSEKAM 98
F E+ RN TWNTMI G G E A
Sbjct: 293 FDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAE 352
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC 158
LF + + D +W +MI+ +SQ +A ++ +M+ G++P +++V SAC
Sbjct: 353 LLFNQMPTK----DIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASAC 408
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
A + AL+LGKE H +V+ LN D + +AL+ MY KCG + F F++ +
Sbjct: 409 AHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIF--FKLTDKNLYC 466
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WNA+I G +G E A+ +F +M++EK+ PN +F+++LSAC HAG VD+ F M
Sbjct: 467 WNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMT 526
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
D+ ++P H+GCMVD+L +SG L+EA ELI+ + EP ++ +LL C H N ++
Sbjct: 527 RDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIA 586
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL-TKLPGIS 390
E+ +L +EP N + +L ++YA W +V IR M+ ++ + K PG S
Sbjct: 587 EDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSS 640
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 138/346 (39%), Gaps = 72/346 (20%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+ +N+MI GF G F A + + M + + ++P+ +S++ AC + A++LG+
Sbjct: 196 NPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQ 255
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ-------------------- 208
H H+ + + TAL+ Y K S AR+ FD+
Sbjct: 256 MVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVG 315
Query: 209 --------FEIKPD-DPAFWNAMISGYGR------------------------------- 228
FE P+ + A WN MI GY R
Sbjct: 316 DMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQ 375
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPK 286
N +Y+ A+ I+ M+ + P+ + V SAC H G ++ K + + M GL
Sbjct: 376 NKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQ---GLNLD 432
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKL 344
+VD+ + G LD + + +L + + +++++ H ++ M M+
Sbjct: 433 VYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMER 492
Query: 345 QEMEPENPTPFVILSN-IYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
+++ P T ILS +AGL D GR R + R P I
Sbjct: 493 EKIMPNGVTFISILSACTHAGL---VDEGRSRFLSMTRDYDIRPDI 535
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 215/382 (56%), Gaps = 7/382 (1%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N +F +++AC LQ +Q HG L S+ ++ +++D Y KCG + A F
Sbjct: 178 NEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF 237
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ ++I W T+I+G G E A +LF + + +P +W ++I+G+ + G
Sbjct: 238 DEMT-VKDIHIWTTLISGYAKLGDMEAADKLFREMPEK----NPVSWTALIAGYVRQGSG 292
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A LF KM + + P +S L A A +++L+ GK+ HG++IR ++ + + ++L
Sbjct: 293 DLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSL 352
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY K G + R F + D WN MIS ++G A+++ D M + +V P
Sbjct: 353 IDMYSKSGSLEASERVF-RICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHP 411
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N + V +L+AC H+G V++ ++ F M G+ P QEH+ C++DLLGR+G E
Sbjct: 412 NRTTLVVILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSK 471
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I E+P EP +++++LG C H N +LG++ A +L +++PE+ P+++LS+IYA G+W
Sbjct: 472 IEEMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKW 531
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E V ++R ++ R++ K +S
Sbjct: 532 ELVEKLRGIMKKRRVNKEKAVS 553
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 146/277 (52%), Gaps = 17/277 (6%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIE--KQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
S++ C L+ G+ +H LKI K+ +T++ L+ MY+KCG A VF ++
Sbjct: 51 SLLQQCGDTKSLKQGKWIHR-HLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMH 109
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
RN+ +WN M++G + +G +A +F+ + D +WN+M+ G++Q G EA
Sbjct: 110 -LRNLYSWNNMVSGFVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDGNLHEAL 164
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
F++++ +G+ + +L+AC L+L ++ HG V+ A + ++ ++I Y
Sbjct: 165 WFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAY 224
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCGQ A+R FD+ +K D W +ISGY + G+ E+A ++F M ++ N S
Sbjct: 225 AKCGQMESAKRCFDEMTVK--DIHIWTTLISGYAKLGDMEAADKLFREMPEK----NPVS 278
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A+++ G D AL +F M ++ K E F
Sbjct: 279 WTALIAGYVRQGSGDLALDLFRKM---IAMRVKPEQF 312
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 122/256 (47%), Gaps = 12/256 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P TF S + A AS+ L+ G+Q+HG ++ + + ++ ++L+DMY K G L +
Sbjct: 308 KPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASER 367
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ ++ + WNTMI+ + +G KA+++ + + P+ T +++ S G
Sbjct: 368 VFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSG 427
Query: 128 MRFEAFKLFEKMQ-STGMVPS---LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E + FE M G+VP C+ +L KE + D+
Sbjct: 428 LVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF------KELMSKIEEMPFEPDK 481
Query: 184 SMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ A++ + G ++ ++ ++ P+ A + + S Y +G++E ++ +M
Sbjct: 482 HIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIM 541
Query: 243 QQEKV-KPNSASFVAV 257
++ +V K + S++ +
Sbjct: 542 KKRRVNKEKAVSWIEI 557
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 44/271 (16%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES-MATAL 189
+A E + G+ + S+L C D +LK GK H H+ + + ++ L
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 190 ISMYMKCGQPSWARRFFDQFEIK----------------------------PD-DPAFWN 220
I MYMKCG+P A + FDQ ++ P+ D WN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
M+ GY ++G A+ F +++ +K N SF +L+AC + + LQ+
Sbjct: 149 TMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKS----RQLQLNQQAHGQ 204
Query: 281 F---GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
G ++D + G+++ A+ E+ + ++ +L+ + LG
Sbjct: 205 VLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG-----YAKLG 259
Query: 338 E-EMAMKL-QEMEPENPTPFVILSNIYAGLG 366
+ E A KL +EM +NP + L Y G
Sbjct: 260 DMEAADKLFREMPEKNPVSWTALIAGYVRQG 290
>gi|5280987|emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
gi|7268109|emb|CAB78447.1| hypothetical protein [Arabidopsis thaliana]
Length = 686
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 214/387 (55%), Gaps = 24/387 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F +++ ACA+L + GRQVH + E +D ++ ++LVDMY KCG L A
Sbjct: 170 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 229
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N ++W M++G +GR E+A+ELF L + +W ++ISGF Q G
Sbjct: 230 VFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSG 284
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EAF +F +M+ + + ++S++ ACA+L+A G++ HG+
Sbjct: 285 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGN------------- 331
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KC A+ F + ++ D W ++I G ++G+ E A+ ++D M
Sbjct: 332 -ALIDMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 388
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +FV ++ AC H G V+K ++F M D+G++P +H+ C++DLLGRSG LDEA
Sbjct: 389 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 448
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNIYAG 364
LI +P P + +LL AC +G +A L + ++P+ +++LSNIYA
Sbjct: 449 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 508
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V R+ + + ++ K PG S+
Sbjct: 509 ASLWGKVSEARRKLGEMEVRKDPGHSS 535
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
NT++ G + A+++F+ + H D W S+++ +Q + + +F + S
Sbjct: 110 NTLVNVYGKCGAASHALQVFDEMPHR----DHIAWASVLTALNQANLSGKTLSVFSSVGS 165
Query: 142 TGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+ + P ++++ ACA+L ++ G++ H H I ++ DE + ++L+ MY KCG +
Sbjct: 166 SSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLN 225
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
A+ FD +K + W AM+SGY ++G E A+E+F ++ + N S+ A++S
Sbjct: 226 SAKAVFDSIRVK--NTISWTAMVSGYAKSGRKEEALELFRILPVK----NLYSWTALISG 279
Query: 261 CGHAGHVDKALQIFTMM 277
+G +A +FT M
Sbjct: 280 FVQSGKGLEAFSVFTEM 296
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 87/219 (39%), Gaps = 38/219 (17%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L K H H+++ + + +A L+++Y KCG S A + FD E+ D W +++
Sbjct: 87 LTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFD--EMPHRDHIAWASVL 144
Query: 224 SGYGR-NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-------- 274
+ + N ++ + ++P+ F A++ AC + G +D Q+
Sbjct: 145 TALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEY 204
Query: 275 --------TMMD---------------DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+++D D +K + MV +SGR +EA EL R
Sbjct: 205 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKSGRKEEALELFR 263
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
LP + + +L+ + S G E EM E
Sbjct: 264 ILPVKNLYSWTALISG---FVQSGKGLEAFSVFTEMRRE 299
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 223/451 (49%), Gaps = 71/451 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F S SAC+ LL GRQ+HGL +K SD G +L DMY KCG L A
Sbjct: 298 QPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESART 357
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VF ++ +++ WN +IAG ++++ F + H G P+ T
Sbjct: 358 VFYHIEKP-DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPV 416
Query: 116 -----------------------WNSMISGFSQLGMRFEAFKLFEK-------------- 138
NS++S +S+ +A ++FE
Sbjct: 417 MLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 139 ------------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
M ++ + P +T+VL + +++ ++G + H ++++ LN
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S++ ALI+MY KCG AR+ FD I D W+++I GY + G + A E+F
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFD--SIGNPDIISWSSLIVGYAQAGCGKEAFELFR 594
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ VKPN +FV +L+AC H G V++ L+++ M +D+ + P +EH CMVDLL R+
Sbjct: 595 TMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARA 654
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G LD A + IR++P P V V+ +LL AC H N ++G+ A + +++P N V+L
Sbjct: 655 GCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLC 714
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NI+A G W+D R+R + + K+PG S
Sbjct: 715 NIHASSGHWKDFARLRSSMRRMDVGKVPGQS 745
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 40/326 (12%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
++C S SVT+ +I+AC+SL L+ GR++H L Q D ++ ++ MY KCG
Sbjct: 89 QKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGS 148
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A N+F + +N+++W SMIS
Sbjct: 149 LKEARNMFDSMP-LKNVVSWT-----------------------------------SMIS 172
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+S+ G A L+ +M +G +P S++ +C+ L KL ++ H HV++++
Sbjct: 173 GYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGA 232
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG-EYESAVEIFD 240
D ALISMY K Q + A F + IK D W +MI+G+ + G E E+ +
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIK--DLISWGSMIAGFSQLGYELEALCHFRE 290
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
++ Q +PN F + SAC D QI + FGL + D+ +
Sbjct: 291 MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLC-IKFGLGSDLFAGCSLCDMYAKC 349
Query: 301 GRLDEARELIRELPEPTVSVYHSLLG 326
G L+ AR + + +P + +++++
Sbjct: 350 GFLESARTVFYHIEKPDLVAWNAIIA 375
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 108 GFKPDPAT----WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADL 161
F P P T + I + + EA K F+ Q P LK VT +++AC+ L
Sbjct: 53 AFSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSP-LKSVTYTHLINACSSL 111
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+L+ G++ H H++ + D + ++SMY KCG AR FD +K + W +
Sbjct: 112 RSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLK--NVVSWTS 169
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDD 280
MISGY R GE ++A+ ++ M + P+ +F +++ +C A Q+ ++ +
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 281 FG 282
FG
Sbjct: 230 FG 231
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG------TALVDMYLK 58
L +PN +TF+ +++AC+ + G GL L Q D I + +VD+ +
Sbjct: 599 LGVKPNEITFVGILTACSHI-----GMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLAR 653
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
GCL A + +++ +++ W T++A ++G +E+ + A K DP+ +
Sbjct: 654 AGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGN----LEVGKRAAENVLKIDPSNSAA 709
Query: 119 MI 120
++
Sbjct: 710 VV 711
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/390 (35%), Positives = 212/390 (54%), Gaps = 20/390 (5%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQV------HGLTLKIEKQSDTMIGTALVDMY 56
+ ++ +SVT + ISA L + G + HG+ + D +G L+DMY
Sbjct: 165 QAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVV------DLYLGNTLIDMY 218
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
+ G + A VF ++K +NI++WN MI G G A +LF + D +W
Sbjct: 219 GRRGMIDFAGRVFYQMK-EKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSR----DVISW 273
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
SMI G+S EA KLF++M + + P V + LSACA L +L G+ H ++ +
Sbjct: 274 TSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYIRK 333
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D+ D + +LI MY KCG A + F+ ++K D W ++ISG NG ESA+
Sbjct: 334 HDIKSDVFVGNSLIDMYCKCGVVEKALQVFN--DMKTRDSVSWTSIISGLAVNGFAESAL 391
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+FD M +E + P +FV VL AC H G VDK ++ F M++ + L P+ +H+GC+VDL
Sbjct: 392 NVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVVDL 451
Query: 297 LGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
L RSG LD A I+++P P V ++ LL AC H N L E ++ KL ++P N +
Sbjct: 452 LCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNGNY 511
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTK 385
V+ S+ YAG RW+DV +IR+++ L K
Sbjct: 512 VLSSSTYAGSDRWDDVIKIRKLMEVTNLQK 541
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+TFI + +CA + ++ G+ V ++K+ +S + + AL+ MY+ G L A VF
Sbjct: 73 LTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDG 132
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ R++++WN++I G R +K ++LF + + D T IS L
Sbjct: 133 ML-ERDVVSWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEM 191
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
L + + G+V L +++ D+ + + G V K+ A+I
Sbjct: 192 GDYLVKYIDEHGVVVDLYLGNTLI----DMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIM 247
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y K G A++ F+ E+ D W +MI GY ++ AV++F M VKP+
Sbjct: 248 GYAKVGNLVAAKKLFN--EMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDE 305
Query: 252 ASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ LSAC H G +D +A+ + D +K ++D+ + G +++A ++
Sbjct: 306 ITVATALSACAHLGSLDAGEAVHDYIRKHD---IKSDVFVGNSLIDMYCKCGVVEKALQV 362
Query: 310 IREL 313
++
Sbjct: 363 FNDM 366
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 99/216 (45%), Gaps = 3/216 (1%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+P WN MI G S+ +A + M G+ S + +CA +S ++ G+
Sbjct: 34 RPTLLVWNHMIHGLSKSDRPNDAIHFYNTMYYKGIQGSHLTFIFLFKSCARVSDVRQGQM 93
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++ ++ ALI MY+ G+ + A++ FD + D WN++I GY +
Sbjct: 94 VRVHSMKLGFESXSFVSNALIHMYVCFGELAMAQKVFDG--MLERDVVSWNSIICGYYQF 151
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
++ +++F MQ V+ +S + + +SA + + +D+ G+
Sbjct: 152 NRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEH-GVVVDLYL 210
Query: 290 FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ GR G +D A + ++ E + +++++
Sbjct: 211 GNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMI 246
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 215/387 (55%), Gaps = 40/387 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ VT +++SACA L L G ++H +++ + ++G+ALV+MY KCG L A V
Sbjct: 178 PDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQV 237
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +L S+K D W+++I G+ +
Sbjct: 238 FDKL---------------------SDK---------------DVYAWSALIFGYVKNNR 261
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +LF ++ + M P+ + +V+SACA L L+ G+ H ++ R S+
Sbjct: 262 STEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNN 321
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI M+ KCG A+R FD K D WN+M++G+ +G A+ F LMQ +
Sbjct: 322 SLIDMFSKCGDIDAAKRIFDSMSYK--DLISWNSMVNGFALHGLGREALAQFRLMQTTDL 379
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F+ VL+AC HAG V + ++F ++ +G++ K EH+GCMVDLL R+G L EAR
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E IR +P +P +++ S+LGAC + N +LGEE A L ++EP N +++LSNIYA
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRK 499
Query: 367 RWEDVGRIRQMINDRQLTKLPGISAGI 393
W +V ++R+++N++ + K PG S+ +
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVV 526
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 165/351 (47%), Gaps = 51/351 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF S++ CA LL + G+ +HG +K SD I T L++MY CG L A +
Sbjct: 77 PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFL 136
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + G RN + W +MI+G M N +A+ L++ + +GF PD T
Sbjct: 137 FERM-GHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVT------------- 182
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ +++SACA+L L +G + H H+ D+ + +A
Sbjct: 183 ----------------------MATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSA 220
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKV 247
L++MY KCG AR+ FD+ K D W+A+I GY +N A+++F ++ +
Sbjct: 221 LVNMYAKCGDLKTARQVFDKLSDK--DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRL 303
+PN + +AV+SAC G ++ + D+ + ++ H ++D+ + G +
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWV-----HDYITRTQKGHSVSLNNSLIDMFSKCGDI 333
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
D A+ + + + ++S++ H LG E + + M+ + P
Sbjct: 334 DAAKRIFDSMSYKDLISWNSMVNGFALH---GLGREALAQFRLMQTTDLQP 381
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 105/215 (48%), Gaps = 4/215 (1%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D TWNSM+ F M A + + E ++ + VP S+L CA L K+GK
Sbjct: 42 DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG V++ L+ D + T L++MY CG AR F++ + + W +MISGY +N
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHR--NKVVWTSMISGYMKNH 159
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
A+ ++ M+++ P+ + ++SAC + +++ + + + +K
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHI-REMDMKICAVLG 218
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+V++ + G L AR++ +L + V + +L+
Sbjct: 219 SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALI 253
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 44/386 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+++T I ++ AC ++ + G+ VHG++++ QSD + +++DMY+KC L A
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL-QASIIDMYVKCRLLDNARK 267
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E RN++ W T+ ISGF++
Sbjct: 268 LF-ETSVDRNVVMWTTL-----------------------------------ISGFAKCE 291
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF LF +M ++P+ + ++L +C+ L +L+ GK HG++IR + D T
Sbjct: 292 RAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT 351
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+ I MY +CG AR FD P+ W++MI+ +G NG +E A++ F M+ +
Sbjct: 352 SFIDMYARCGNIQMARTVFDMM---PERNVISWSSMINAFGINGLFEEALDCFHKMKSQN 408
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PNS +FV++LSAC H+G+V + + F M D+G+ P++EH+ CMVDLLGR+G + EA
Sbjct: 409 VVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEA 468
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ I +P +P S + +LL AC H DL E+A KL MEPE + +V+LSNIYA
Sbjct: 469 KSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADA 528
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G WE V +R+ + + K G SA
Sbjct: 529 GMWEMVNCVRRKMGIKGYRKHVGQSA 554
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/382 (26%), Positives = 166/382 (43%), Gaps = 60/382 (15%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
D +S + I AC L L+ G +HGL +K D + +LV+MY + G + A
Sbjct: 105 DGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQ 164
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF E+ RN + W ++ G + + DP
Sbjct: 165 KVFDEIP-VRNSVLWGVLMKGYL------------------KYSKDP------------- 192
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESM 185
E F+LF M+ TG+ + ++ AC ++ A K+GK HG IR +++ + +
Sbjct: 193 ----EVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++I MY+KC AR+ FE D + W +ISG+ + E AVE FDL +Q
Sbjct: 249 QASIIDMYVKCRLLDNARKL---FETSVDRNVVMWTTLISGFAK---CERAVEAFDLFRQ 302
Query: 245 ---EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
E + PN + A+L +C G + + M + G++ +F +D+ R G
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRN-GIEMDAVNFTSFIDMYARCG 361
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM----AMKLQEMEPENPTPFVI 357
+ AR + +PE V + S++ A +N E + MK Q + P + T +
Sbjct: 362 NIQMARTVFDMMPERNVISWSSMINA--FGINGLFEEALDCFHKMKSQNVVPNSVTFVSL 419
Query: 358 LS------NIYAGLGRWEDVGR 373
LS N+ G ++E + R
Sbjct: 420 LSACSHSGNVKEGWKQFESMTR 441
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 130/285 (45%), Gaps = 45/285 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T +++ +C+SL L+ G+ VHG ++ + D + T+ +DMY +CG + A V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ RN+++W++MI +NG E+A++ F + + P+ T+ S++S S G
Sbjct: 370 F-DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGN 428
Query: 129 RFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +K FE M + G+VP +E
Sbjct: 429 VKEGWKQFESMTRDYGVVP-----------------------------------EEEHYA 453
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ + + G+ A+ F D +KP A W A++S + E + A EI + + +
Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASA-WGALLSACRIHKEVDLAGEIAEKLLS--M 510
Query: 248 KPNSASFVAVLSACGHAGHVDKAL-QIFTMMDDDFGLKPKQEHFG 291
+P +S +LS + D + ++ + G+K ++H G
Sbjct: 511 EPEKSSVYVLLSNI----YADAGMWEMVNCVRRKMGIKGYRKHVG 551
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 110/226 (48%), Gaps = 18/226 (7%)
Query: 109 FKPDPATWNSMISGFSQLGM--RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALK 165
+K + +WN+++SG+S+ + L+ +M+ V S V ++ AC L L+
Sbjct: 68 WKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAI-KACVGLGLLE 126
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G HG ++ L+KD+ +A +L+ MY + G A++ FD+ ++ + W ++ G
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR--NSVLWGVLMKG 184
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH--AGHVDKALQIFTM----MDD 279
Y + + +F LM+ + ++ + + ++ ACG+ AG V K + ++ +D
Sbjct: 185 YLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQ 244
Query: 280 DFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
L+ ++D+ + LD AR+L + V ++ +L+
Sbjct: 245 SDYLQAS------IIDMYVKCRLLDNARKLFETSVDRNVVMWTTLI 284
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/169 (17%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
++L+ + L ++ H VI + + ++L + Y++ + +A F++
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 213 PDDPAFWNAMISGYGRNGE--YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
+ WN ++SGY ++ Y + +++ M++ +S + V + AC G ++
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 271 LQIFTM-----MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+ I + +D D + P +V++ + G ++ A+++ E+P
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPS------LVEMYAQLGTMESAQKVFDEIP 171
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 135/414 (32%), Positives = 218/414 (52%), Gaps = 38/414 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +F V+ ACA+ + GRQ+HGL +K + +D + L+++Y + G A V
Sbjct: 108 PDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKV 167
Query: 69 FQEL-----------------KG-------------SRNILTWNTMIAGMMLNGRSEKAM 98
+ KG RN+ +WN MI+G G ++A
Sbjct: 168 LDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAR 227
Query: 99 ELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSA 157
E+F+ + + D +WN+M++ ++ +G E ++F M + P + +VLSA
Sbjct: 228 EVFDSMPVK----DVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSA 283
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA 217
CA L +L G+ H ++ + + + +ATAL+ MY KCG+ A F + D +
Sbjct: 284 CASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFR--DTSKRDVS 341
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN++I+G +G + A+EIF M E KPN +F+ VLSAC H G +D+A ++F MM
Sbjct: 342 TWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMM 401
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV-YHSLLGACWCHLNSDL 336
+ +G++P EH+GCMVDLLGR G+ +EA EL+ E+P S+ SLLGAC +
Sbjct: 402 NSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQ 461
Query: 337 GEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
E +A +L E P + +V +SN+YA GRW++ +R + ++ K PG S
Sbjct: 462 AERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCS 515
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 138/252 (54%), Gaps = 16/252 (6%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
++ P+ T ++V+SACASL L G VH K + + + TALVDMY KCG + A
Sbjct: 269 AERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKA 328
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF++ R++ TWN++I G+ ++G + A+E+F + +EGFKP+ T+ ++S +
Sbjct: 329 LEVFRD-TSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNH 387
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
+G+ +A KLFE M S G+ P+++ C+ +L ++GK + ++
Sbjct: 388 VGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLG--------RMGKFEEAEELVNEVPA 439
Query: 182 DES--MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
DE+ + +L+ + G+ A R ++ E P + + + M + Y +G ++ A+E+
Sbjct: 440 DEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEV 499
Query: 239 FDLMQQEKVKPN 250
M+ E+VK N
Sbjct: 500 RGKMRAERVKKN 511
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 125/306 (40%), Gaps = 67/306 (21%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
P+ T NS+I ++ A +F +M + P T VL ACA + G++
Sbjct: 73 PNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 132
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
HG +++DL D + LI++Y + G AR+ D+ ++ D WN+++S Y G
Sbjct: 133 HGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVR--DAVSWNSLLSAYLDKG 190
Query: 231 EYESAVEIFDLMQQEKVKP---------------------------NSASFVAVLSACGH 263
E A +FD M++ V+ + S+ A+++A H
Sbjct: 191 LVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAH 250
Query: 264 AGHVDKALQIFTMMDDDFGLKP---------------------------------KQEHF 290
G ++ L++F MM DD +P + E F
Sbjct: 251 VGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGF 310
Query: 291 --GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+VD+ + G++D+A E+ R+ + VS ++S++ H LG++ EM
Sbjct: 311 VATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVH---GLGKDALEIFSEMV 367
Query: 349 PENPTP 354
E P
Sbjct: 368 YEGFKP 373
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 215/385 (55%), Gaps = 39/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ T+ VISAC + + +G+ H L +K + I AL+ MYLK
Sbjct: 302 EPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLK--------- 352
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRS-EKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
LN +S E A+ LF H D +WNS+++GFSQ+
Sbjct: 353 ----------------------LNNKSMEAALNLF----HSMKSKDRVSWNSILTGFSQM 386
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G +A KLF M+S+ ++VL +C+DL+ L+LG++ H ++ + ++ +A
Sbjct: 387 GFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVA 446
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++LI MY KCG A + F+ + + WN+++ Y ++G+ + A+++F +M++ +
Sbjct: 447 SSLIFMYSKCGIIEDAWKCFE--DTTKESSITWNSIMFAYAQHGQGDVALDLFSIMRERE 504
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VK + +FVAVL+AC H G V++ + M+ D+G+ P+ EH+ C VDL GR+G L+EA
Sbjct: 505 VKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEA 564
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ LI +P +P V +LLGAC N +L ++A +L E+EPE +VILSN+Y L
Sbjct: 565 KALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHL 624
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
RW+D + +++ +R++ K+PG S
Sbjct: 625 KRWDDKASVTRLMRERKVKKVPGWS 649
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 37/259 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + TF S++ A G+QVH L +KI + G+AL+DMY KC
Sbjct: 99 QADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCE------- 151
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R E A ++F+G+ F +WN++I GF Q+G
Sbjct: 152 -------------------------RVEDAYDVFQGMPVRNF----VSWNALIDGFVQVG 182
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
R AF L + MQ G+ +L+ KL + H +I+ L ++
Sbjct: 183 DRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCN 242
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A ++ Y +CG A+R FD + D WN+M+ Y + + E A +F MQ
Sbjct: 243 ATLTAYSECGLLEDAKRVFDG-AVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGF 301
Query: 248 KPNSASFVAVLSACGHAGH 266
+P+ ++ V+SAC A H
Sbjct: 302 EPDIYTYTCVISACFAAAH 320
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 155/362 (42%), Gaps = 41/362 (11%)
Query: 3 ECLSDEPNSV---TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC 59
+C+ E V TF +++ + + Q+H +K + + A + Y +C
Sbjct: 192 DCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATLTAYSEC 251
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G L A VF G+R+++TWN+M+ +++ + E A LF + GF+PD T+
Sbjct: 252 GLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTY--- 308
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
T V+SAC + GK H VI+ L
Sbjct: 309 --------------------------------TCVISACFAAAHKNYGKSFHALVIKRGL 336
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+ ++ ALI+MY+K S +K D WN++++G+ + G E A+++F
Sbjct: 337 EESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLF 396
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M+ + + ++ AVL +C + QI ++ G ++ + +
Sbjct: 397 GHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIH-LLTVKTGFDSNDFVASSLIFMYSK 455
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVI 357
G +++A + + + + ++S++ A H D+ ++ M+ +E++ ++ T +
Sbjct: 456 CGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAV 515
Query: 358 LS 359
L+
Sbjct: 516 LT 517
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+E + + +V+ +C+ L LQ G+Q+H LT+K S+ + ++L+ MY KCG + A
Sbjct: 404 EEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAW 463
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F++ +I TWN+++ +G+ + A++LF + K D T+ ++++ S +
Sbjct: 464 KCFEDTTKESSI-TWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHV 522
Query: 127 GMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ + + + M+S +P C + L +E + +
Sbjct: 523 GLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYL------EEAKALIDSMPFQPN 576
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ L+ CG A + Q E++P++ + + + YG ++ + L
Sbjct: 577 AMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRL 636
Query: 242 MQQEKVK 248
M++ KVK
Sbjct: 637 MRERKVK 643
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 90 LNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+G A +LF+ + H+ D TWN+MI+G+ + G A++ + M+ G
Sbjct: 48 FSGDLNLACKLFDEMPHK----DTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGY 103
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQF 209
S+L A LG++ H +++ + +AL+ MY KC + A +D F
Sbjct: 104 TFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDA---YDVF 160
Query: 210 EIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ P + WNA+I G+ + G+ ++A + D MQ+E V+ +F +L+
Sbjct: 161 QGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLT 211
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 170 THGHVIRADLNKDESMATALISMYMKC--GQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
TH ++ + +A ++ Y KC G + A + FD E+ D WN MI+GY
Sbjct: 21 THCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFD--EMPHKDTVTWNTMITGYV 78
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
+G +A E M++ + + +F ++L HA D Q+ +++ G +
Sbjct: 79 ESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLI-VKIGYEQSV 137
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++D+ + R+++A ++ + +P +++L+
Sbjct: 138 YAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALI 175
>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial [Vitis vinifera]
Length = 681
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 8/350 (2%)
Query: 42 KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF 101
K+ DT+ ++ Y++ + A +FQE+ + LTWN+MI+G G E A LF
Sbjct: 331 KERDTISWNTMISGYVRMSDMEEAWMLFQEMPNP-DTLTWNSMISGFAQKGNLELARALF 389
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
+ + +WNSMI+G+ G A +L+ +M G P ++SVLS C+
Sbjct: 390 ATIPQKNL----VSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGF 445
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+AL LG + H + + + D + +LI+MY +CG AR FD+ +++ + + WNA
Sbjct: 446 AALHLGMQIHQQITKTVI-PDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVIS-WNA 503
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI GY +G A+E+F+LM++ KV+P +F++VL+AC HAG V + F M +F
Sbjct: 504 MIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEF 563
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEM 340
G++P+ EHF +VD++GR G+L+EA +LI +P EP +V+ +LLGAC H N +L
Sbjct: 564 GIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPDKAVWGALLGACRVHNNVELARVA 623
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A L ++EPE+ P+V+L N+YA +G+W++ +R M+ + K PG S
Sbjct: 624 AEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPGYS 673
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 23/258 (8%)
Query: 62 LPCAHNVFQELKGS--RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
L C + Q+ K S ++ T N I+ ++ NGR +A LF+ + TWNSM
Sbjct: 49 LHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNI----VTWNSM 104
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
I+G+ + +A KLF++M P V+ L +S E H+
Sbjct: 105 ITGYVRRREMAKARKLFDEM------PDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMP 158
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+D +IS Y + G+ A + FD + + + WNAM++G+ +NG+ E A+E F
Sbjct: 159 ERDCVSWNTMISGYTRSGRMDEALQLFDSMQER--NVVSWNAMVTGFLQNGDVERAIEFF 216
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF---TMMDDDFGLKPKQEHFGCMVDL 296
M + +SAS A+++ G +D+A +I DDD G + ++
Sbjct: 217 MRMPER----DSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKG--DLVHAYNILLAG 270
Query: 297 LGRSGRLDEARELIRELP 314
G++GR+D+AR+L ++P
Sbjct: 271 YGQNGRVDKARQLFDQIP 288
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ T SV+S C+ L G Q+H K D I +L+ MY +CG + A
Sbjct: 428 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKT-VIPDIPINNSLITMYSRCGAIVEAR 486
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F E+K + +++WN MI G +G + A+ELFE + +P T+ S+++ +
Sbjct: 487 TIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHA 546
Query: 127 GMRFEAFKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G E F+ M G+ P ++ S++ L +E + D+++
Sbjct: 547 GFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQL---EEAMDLINSMPFEPDKAV 603
Query: 186 ATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
AL+ AR + +++P+ A + + + Y G++++A E+ +M++
Sbjct: 604 WGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMER 663
Query: 245 EKVK 248
++
Sbjct: 664 NNIR 667
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 138/297 (46%), Gaps = 32/297 (10%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMM-LNGR-SEKAMEL 100
Q + + +++ Y++ + A +F E+ R++++WN MI+G + GR E+ L
Sbjct: 95 QRNIVTWNSMITGYVRRREMAKARKLFDEMP-DRDVVSWNLMISGYVSCQGRWVEEGRHL 153
Query: 101 FEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD 160
F+ + D +WN+MISG+++ G EA +LF+ MQ +V VT L
Sbjct: 154 FDEMPER----DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDV 209
Query: 161 LSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA--- 217
A++ +D + +AL++ ++ G+ A+R + DD
Sbjct: 210 ERAIEFFMRMP--------ERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLV 261
Query: 218 -FWNAMISGYGRNGEYESAVEIFDLM------QQE--KVKPNSASFVAVLSACGHAGHVD 268
+N +++GYG+NG + A ++FD + Q++ + + N S+ +++ A +
Sbjct: 262 HAYNILLAGYGQNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIF 321
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
A +F M + + + M+ R ++EA L +E+P P ++S++
Sbjct: 322 SARVLFDQMKERDTIS-----WNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMI 373
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 34/302 (11%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + ++ Y + G + A +F ++ RN+++WN M+ G + NG E+A+E F
Sbjct: 159 ERDCVSWNTMISGYTRSGRMDEALQLFDSMQ-ERNVVSWNAMVTGFLQNGDVERAIEFFM 217
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF--EKMQSTGMVPSLKCVTSVLSACAD 160
+ D A+ +++++G Q G EA ++ + Q + +L+
Sbjct: 218 RMPER----DSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQ 273
Query: 161 LSALKLGKETHGHVIRAD--------LNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+ ++ + D ++ ++I Y+K AR FDQ +K
Sbjct: 274 NGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQ--MK 331
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN MISGY R + E A +F QE P++ ++ +++S G+++ A
Sbjct: 332 ERDTISWNTMISGYVRMSDMEEAWMLF----QEMPNPDTLTWNSMISGFAQKGNLELARA 387
Query: 273 IFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIREL----PEPTVSVYHSLLG 326
+F + P++ + M+ +G A EL R++ +P S+L
Sbjct: 388 LFATI-------PQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLS 440
Query: 327 AC 328
C
Sbjct: 441 VC 442
>gi|297596280|ref|NP_001042300.2| Os01g0197500 [Oryza sativa Japonica Group]
gi|255672971|dbj|BAF04214.2| Os01g0197500 [Oryza sativa Japonica Group]
Length = 906
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/389 (34%), Positives = 220/389 (56%), Gaps = 9/389 (2%)
Query: 8 EPNSVTFISVISAC--ASLLYLQFGRQVHGL-TLKIEKQSDTMIGTALVDMYLKCGCLPC 64
E N+ + +SAC A L L G+ +HG +K + +L+ MY K G +
Sbjct: 479 EGNAESMAVALSACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDD 538
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISG 122
A F++ ++N +TWNT+I +KA+++ + G P+ +W+++I G
Sbjct: 539 AKKAFRDAT-AKNTVTWNTLITSYAAARLCDKALDVLAQMEQIGGTVAPNVVSWSAVIGG 597
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+ G A +LF +MQ + P++ + +VLSAC DL AL+LG+E HGH ++A+L++
Sbjct: 598 FASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRH 657
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ LI+MY KCG+ S AR+ FD +K D WN+M++GYG +G + A+ +F M
Sbjct: 658 SLVENGLINMYAKCGKVSGARKVFDG--MKTRDLISWNSMLAGYGMHGLCDEALALFTDM 715
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
V+P+ +FVAVLSACGHAG V + ++F M + P EH+ CMV LLGR+G
Sbjct: 716 AGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGL 775
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L +A EL+ +P P + V+ +LL +C H ++ + E + + E ++ ++++N+
Sbjct: 776 LRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQSTGNHMLITNL 835
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W++ ++R M + L K PG S
Sbjct: 836 YAMCGMWDESKKVRVMTKEAGLRKNPGQS 864
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 18/305 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T + A AS + H L L + Q D + ++ Y + G A V
Sbjct: 346 PNSYTLPLALRAAASP-RVASAVHAHALHLGLHAQHD--VAGQILAAYSRLGRAADARRV 402
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R WN +I+ + A + F +A G +PD TW +++S ++ G
Sbjct: 403 FDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGARPDAVTWTALLSAHARSGK 462
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSAC---ADLSALKLGKETHG-HVIRADLNKDES 184
+ +LF +MQ +G + + + LSAC DL AL GK HG V++ ++
Sbjct: 463 HADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDL-ALAKGKAIHGCGVVKGLMHGYLF 521
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LI MY K G+ A++ F K + WN +I+ Y + A+++ M+Q
Sbjct: 522 VTNSLICMYGKLGEMDDAKKAFRDATAK--NTVTWNTLITSYAAARLCDKALDVLAQMEQ 579
Query: 245 --EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM----VDLLG 298
V PN S+ AV+ +G D+AL++F M + L P + VDLL
Sbjct: 580 IGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQW-LSPNVVTMATVLSACVDLLA 638
Query: 299 -RSGR 302
R GR
Sbjct: 639 LRLGR 643
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 219/393 (55%), Gaps = 18/393 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC-LPCAHN 67
PN + V+ +C ++ R VH L+ + ++ TAL+D YL+ + A
Sbjct: 153 PNHFIYPHVLKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARL 212
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ RN+++W MI+G G+ A+ LFE + D +WN++I+G++Q G
Sbjct: 213 LFDEMT-ERNVVSWTAMISGYTRLGQIGNAVLLFEEMPER----DVPSWNALIAGYTQNG 267
Query: 128 MRFEAFKLFEKMQST-------GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+ EA LF +M + G P+ LSAC L+LGK HG+V R L
Sbjct: 268 LFMEALSLFRRMIAVEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLG 327
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ AL+ MY KCG ARR FD+ WN+MI+ +G+ ++A+ +F+
Sbjct: 328 LDSFVSNALVDMYGKCGCLKEARRVFDR--TLERSLTSWNSMINCLALHGQSQNAISVFE 385
Query: 241 LMQQ--EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
M VKP+ +F+ +L+AC H G V+K F +M ++G++P+ EH+GC+VDLLG
Sbjct: 386 EMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLG 445
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+G+ +EA E++R + EP ++ SLL C H ++DL E KL +M+P N ++
Sbjct: 446 RAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIM 505
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L+NIY LG+W++V ++R+++ ++ K PG S
Sbjct: 506 LANIYGELGKWDEVRKVRKVLKEQNAHKTPGCS 538
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 84/337 (24%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ PN VT + +SAC L+ G+ +HG + D+ + ALVDMY KCGCL A
Sbjct: 291 NRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEAR 350
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL--AHEGFKPDPATWNSMISGFS 124
VF R++ +WN+MI + L+G+S+ A+ +FE + G KPD T+ +++ +
Sbjct: 351 RVFDRTL-ERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFIGLLNACT 409
Query: 125 QLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
G+ + + FE M Q+ G+ P + E +G
Sbjct: 410 HGGLVEKGWLYFELMTQNYGIEPQI--------------------EHYG----------- 438
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L+ + + GQ A I+PD+ W ++++G
Sbjct: 439 ----CLVDLLGRAGQFEEAMEVVRGMRIEPDE-VIWGSLLNG------------------ 475
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKA-LQIFTMMDDDFGLKPKQEHFGCMV-DLLGRSG 301
C GH D A I ++D D P +G M+ ++ G G
Sbjct: 476 -----------------CKIHGHTDLAEFSIKKLIDMD----PNNGGYGIMLANIYGELG 514
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+ DE R++ + L E H G W +++ + +
Sbjct: 515 KWDEVRKVRKVLKEQNA---HKTPGCSWIEIDNQVHQ 548
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/454 (31%), Positives = 221/454 (48%), Gaps = 77/454 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ T SV+ ACA L L G+++HG + S+ + LVD+Y +C + A
Sbjct: 43 EPNARTLASVLPACARLQNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALK 102
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F +N++++NTMI G NG EKA ELF+ + E D +WNSMISG++
Sbjct: 103 IFSGFS-VKNVVSYNTMIVGYCENGNVEKAKELFDQM--ELVGKDTISWNSMISGYADNL 159
Query: 128 MRFEAFK-----------------------------------LFEKMQSTGMVPS----- 147
++ E K L +KM+ G P+
Sbjct: 160 LKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWN 219
Query: 148 ------------------------------LKCVTSVLSACADLSALKLGKETHGHVIRA 177
+ V +L ACA L+ + GK+ H H IR
Sbjct: 220 GIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQ 279
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D + AL+ MY KCG A + +++ I + NAM++ Y +G + +
Sbjct: 280 GYELDVHIGAALVDMYAKCGSIKHAMQVYNR--ISNPNLVSQNAMLTAYAMHGHGDEGIA 337
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+F M +P+ +F++VLS+C HAG V+ + F +M + + P +H+ C+VDLL
Sbjct: 338 LFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLL 396
Query: 298 GRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV 356
R+GRLDEA EL++++P +P ++ +LLG C N +LGE A L E+EP N +V
Sbjct: 397 SRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYV 456
Query: 357 ILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L+N+YA GRW D+ R RQMI DR + K PG S
Sbjct: 457 LLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCS 490
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 23/281 (8%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
E KP+ +W+++I GF+Q G EA +L +MQ+ G P+ + + SVL ACA L L L
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
GKE HG+V R + + L+ +Y +C A + F F +K + +N MI GY
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVK--NVVSYNTMIVGY 122
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
NG E A E+FD Q E V ++ S+ +++S G+ D L+ +
Sbjct: 123 CENGNVEKAKELFD--QMELVGKDTISWNSMIS-----GYADNLLKCEDLKAAQLAFDGV 175
Query: 287 QEH----FGCMVDLLGRSGRLDEARELIRELP----EPTVSVYHSLLGACWCHLNSDLGE 338
E + ++ +L+ + LI+++ EP V ++ ++ H+ +
Sbjct: 176 TERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG---HVENG-HN 231
Query: 339 EMAMKL-QEMEPENPTPFV-ILSNIYAGLGRWEDVGRIRQM 377
E+A++L EM+ + P + + I R + R +Q+
Sbjct: 232 ELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQV 272
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/367 (34%), Positives = 210/367 (57%), Gaps = 8/367 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N TF SV+SAC++L L+ G++VH LK ++ I + LVD+Y KC + A +V
Sbjct: 679 NEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVN 738
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
EL+ +N+ + +MI G G +A +LF+ L + + W ++ G+ +L
Sbjct: 739 SELR-MQNVYSITSMIVGYSSQGNMAEARKLFDSLDEK----NSVVWTALFFGYVKLQQC 793
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
F+L + + VP + + S++ ACA +AL GK+ H +++RA + D + ++L
Sbjct: 794 EAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSL 853
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG +A R F E+ D +N MI+GY +G AV++F M + KP
Sbjct: 854 VDMYSKCGSIIYAERIFR--EVTDKDSIIYNIMIAGYAHHGWENEAVQLFKEMVKHGFKP 911
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
++ +FVA+LSAC H G V+ F M +D+ + P+ +H+ CM+DL GR+ +LD+A E
Sbjct: 912 DAITFVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEF 971
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P + ++ + L AC + N++L + +L +E EN + +V L+N+YA G W
Sbjct: 972 MRKIPIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNW 1031
Query: 369 EDVGRIR 375
E++GRIR
Sbjct: 1032 EEMGRIR 1038
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 37/350 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T I++++ A L + +G+Q+H LK ++L+DMY KCG A V+
Sbjct: 548 TLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGC 607
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ ++ N M+A G + A++LF E + D WN+MISGF Q G E+
Sbjct: 608 GEVVDSVSRNAMVAACCREGEIDVALDLF---WKELEQNDVVAWNTMISGFVQNGYEEES 664
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
KLF +M + + SVLSAC++L +LKLGKE H +V++ L + + + L+ +
Sbjct: 665 LKLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDV 724
Query: 193 YMKC-------------------------------GQPSWARRFFDQFEIKPDDPAFWNA 221
Y KC G + AR+ FD + K + W A
Sbjct: 725 YCKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEK--NSVVWTA 782
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
+ GY + + E+ E+ ++E P+ ++++ AC + QI + M
Sbjct: 783 LFFGYVKLQQCEAVFELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRA- 841
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
G+K + +VD+ + G + A + RE+ + +Y+ ++ H
Sbjct: 842 GIKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSIIYNIMIAGYAHH 891
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 124/272 (45%), Gaps = 39/272 (14%)
Query: 26 YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMI 85
+L+ G H +K + L+ Y K G L A +F E+ RN+ +WN +I
Sbjct: 426 HLKHGLLCHLQGIKSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMP-ERNVFSWNAII 484
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GMRFEAFKLFEKMQSTGM 144
A + + +A LF+ D T+NSM+SG+++ G + +A F +MQ+
Sbjct: 485 AAYVKSQNLRQARALFDS----AVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPD 540
Query: 145 VPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA 202
+ + T ++L+ A L + GK+ H +++ + A++LI MY KCG A
Sbjct: 541 MIRIDEFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEA 600
Query: 203 RRFF-----------------------------DQF--EIKPDDPAFWNAMISGYGRNGE 231
R + D F E++ +D WN MISG+ +NG
Sbjct: 601 CRVYYGCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGY 660
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
E ++++F M EKV N +F +VLSAC +
Sbjct: 661 EEESLKLFVRMADEKVGWNEHTFASVLSACSN 692
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + IS+I ACA L G+Q+H L+ + DT + ++LVDMY KCG + A +
Sbjct: 810 PDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMYSKCGSIIYAERI 869
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS-----GF 123
F+E+ +I+ +N MIAG +G +A++LF+ + GFKPD T+ +++S G
Sbjct: 870 FREVTDKDSII-YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAITFVALLSACRHGGL 928
Query: 124 SQLGMRF 130
+LG F
Sbjct: 929 VELGEHF 935
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 218/413 (52%), Gaps = 38/413 (9%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF V+ AC L ++ G VHG+ L++ S+ ++ L+ + KCG L A ++F
Sbjct: 107 DSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLF 166
Query: 70 QE-LKGS-----------------------------RNILTWNTMIAGMMLNGRSEKAME 99
+ KG R++++WN MI G + G E A
Sbjct: 167 DDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARM 226
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
LF+ E D +WN+MI+G+ G+ +A +LF +M G+ P + S+LSACA
Sbjct: 227 LFD----EAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACA 282
Query: 160 DLSALKLGKETHGHVIRADLNKDES-MATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
DL L+ GK+ H V+ + K + + ALI MY KCG + F + I D
Sbjct: 283 DLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVF--WSITDKDVIS 340
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++I G +G + ++ +F +MQ+ K+ PN +FV VL AC HAG +D+ + F +M
Sbjct: 341 WNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMS 400
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLG 337
++ ++P H GCMVD+LGR+G L EA + I + EP ++ +LL AC H + +L
Sbjct: 401 SEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELA 460
Query: 338 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+ KL M ++ +V++SN+YA G W+ ++R++++D +TK+ G S
Sbjct: 461 KVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSS 513
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ VT +S++SACA L L+ G++VH ++I + T++G AL+DMY KCG + + +
Sbjct: 269 PDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLD 328
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + +++++WN++I GM L+G ++++ LF+ + P+ T+ ++ S G
Sbjct: 329 VFWSIT-DKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAG 387
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E +K F+ M S + P+++ C+ +L L KE + + +
Sbjct: 388 EIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLL------KEAAKFIDSMKIEPNA 441
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L++ G A+ ++ F ++ D + M + Y GE++ A ++ LM
Sbjct: 442 IIWRTLLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLM 501
Query: 243 QQEKV-KPNSASFV 255
V K +SFV
Sbjct: 502 DDSGVTKIRGSSFV 515
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 224/443 (50%), Gaps = 63/443 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL----- 62
EPN TF SV+ AC + YL +G+ VHG+ K D + +AL+ Y +C +
Sbjct: 234 EPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKA 293
Query: 63 -------PC-------------------AHNVFQELKGSRNILTWNTMIAGMMLNGRSEK 96
PC A +F +L+ +N +++N M+ G +GR E
Sbjct: 294 VYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLR-EKNPVSYNLMLKGYATSGRIEG 352
Query: 97 AMELFEGLAH--------------------EGFK--------PDPATWNSMISGFSQLGM 128
+ LFE + H + FK DP TWNSMISG+ Q
Sbjct: 353 SKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQ 412
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A KL+ M T + S +++ AC L ++LG+ H H IR + + + T+
Sbjct: 413 HEGALKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTS 472
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A+ F + P+ AF A+I+GY +G A +FD M + KV
Sbjct: 473 LIDMYAKCGSIYDAQTSFASVCL-PNVAAF-TALINGYVHHGLGIEAFSVFDEMLKHKVP 530
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN A+ + +LSAC AG V + + +F M+ +G+ P EH+ C+VDLLGRSGRL EA
Sbjct: 531 PNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEA 590
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
IR +P E ++ +LL ACW ++ +LGE +A K+ ++P+ + ++ILSNIYA LG+
Sbjct: 591 FIRCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGK 650
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + +R+ + ++ K+ G S
Sbjct: 651 WVEKINVRRKLMSLKVKKIRGCS 673
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 41/400 (10%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
C + + N TF S++S CA G+Q H L LK Q +G+ALV Y +
Sbjct: 95 HCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDI 154
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF EL +N L W+ ++ G + + A++LF + D W +MIS
Sbjct: 155 SGAKQVFDELH-DKNDLLWDLLLVGYVKCNLMDDALDLFMKIP----TRDVVAWTTMISA 209
Query: 123 FSQLGMRFE-AFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+++ + +LF M+ G V P+ SV+ AC + L GK HG + + +
Sbjct: 210 YARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFH 269
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFE-----------------------------I 211
D S+ +ALI Y +C A+ +D E +
Sbjct: 270 FDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKL 329
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ +P +N M+ GY +G E + +F+ M + ++S ++S G +DKA
Sbjct: 330 REKNPVSYNLMLKGYATSGRIEGSKRLFERMTHK----TTSSLNTMISVYSRNGEIDKAF 385
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++F + + + G L + R E + S + +L AC C
Sbjct: 386 KLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCL 445
Query: 332 LNSDLGEEMAMK-LQEMEPENPTPFVILSNIYAGLGRWED 370
LG+ + + ++E N L ++YA G D
Sbjct: 446 EYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYD 485
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 39/341 (11%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
NI++ N I+ + +G + A LF + +WN MISG+S+ G EA L
Sbjct: 36 NIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV----VSWNIMISGYSKFGKYSEALNLA 91
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M + + +S+LS CA GK+ H V+++ L E + +AL+ Y
Sbjct: 92 SEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANI 151
Query: 197 GQPSWARRFFDQFEIKPD-----------------------------DPAFWNAMISGYG 227
S A++ FD+ K D D W MIS Y
Sbjct: 152 NDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYA 211
Query: 228 RN-GEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+ + +E+F M+ +V+PN +F +V+ ACG ++ + ++ +G
Sbjct: 212 RSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGIL-TKYGFHF 270
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
++ + +D A+ + + P + +SLL + EE+ KL+
Sbjct: 271 DHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLR 330
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
E +NP + ++ YA GR E R+ + + + + L
Sbjct: 331 E---KNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSL 368
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S E + TF ++ AC L Y+Q G+ +H ++ S+ +GT+L+DMY KCG + A
Sbjct: 427 SVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDA 486
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F + N+ + +I G + +G +A +F+ + P+ AT ++S S
Sbjct: 487 QTSFASV-CLPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSC 545
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
GM E +F M+ G++P+L+ CV +L
Sbjct: 546 AGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLL 579
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 42/383 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VTFI+++SA +SL + Q+H L LK DT IG AL+ Y KCG + +F
Sbjct: 591 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 650
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ +R D +WNSMISG+ + +
Sbjct: 651 MSETR-----------------------------------DEVSWNSMISGYIHNELLHK 675
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A L M G ++LSACA ++ L+ G E H IRA L D + +AL+
Sbjct: 676 AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVD 735
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ +A RFF+ ++ + WN+MISGY R+G E A+++F M + P+
Sbjct: 736 MYSKCGRIDYASRFFELMPLR--NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 793
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+FV VLSAC H G V++ + F M + + L P+ EHF CMVDLLGR+G+LDE + I
Sbjct: 794 VTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFIN 853
Query: 312 ELP-EPTVSVYHSLLGACWCHL---NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+P +P V ++ ++LGAC C N++LG A L E+EP+N +V+L+N+YA +
Sbjct: 854 SMPMKPNVLIWRTVLGAC-CRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEK 912
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV + R + + + K G S
Sbjct: 913 WEDVAKARTAMKEAAVKKEAGCS 935
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF +++SACAS+ L+ G +VH ++ +SD ++G+ALVDMY KCG + A F
Sbjct: 691 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 750
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
EL RN+ +WN+MI+G +G EKA++LF + +G PD T+ ++S S +G
Sbjct: 751 -ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 809
Query: 130 FEAFKLFEKM 139
E F+ F+ M
Sbjct: 810 EEGFEHFKSM 819
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 166/398 (41%), Gaps = 69/398 (17%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF S+I+ + R++H ++K + + L+++Y++ G L A +F
Sbjct: 70 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 129
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +RN++TW +I+G NG+ ++A F + GF P+ + S +
Sbjct: 130 DEM-SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRA------- 181
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
C S S C KLG + HG + + D + L
Sbjct: 182 --------------------CQESGPSGC------KLGVQIHGLISKTRYGSDVVVCNVL 215
Query: 190 ISMYMKC-GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE--- 245
ISMY C + AR FD I+ + WN++IS Y R G+ SA ++F MQ+E
Sbjct: 216 ISMYGSCLDSANDARSVFDGIGIR--NSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLG 273
Query: 246 -KVKPNSASFVAVL-SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL------- 296
KPN +F +++ +AC VD L + M + E G + DL
Sbjct: 274 FSFKPNEYTFGSLITTAC---SSVDFGLCVLEQM------LARVEKSGFLQDLYVSSALV 324
Query: 297 --LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
R G D+A+ + ++ V + L+ + ++ +++++ N
Sbjct: 325 SGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDS 384
Query: 355 FVILSNIYAGLGRWEDVGR---------IRQMINDRQL 383
+V+L + ++ E+ R IR +ND ++
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 422
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 10 NSVTFISVISACASLLYLQ----FGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPC 64
NS +++ ++SA + L+ GR+VH ++ + + IG LV+MY K G +
Sbjct: 381 NSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIAD 440
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +VF+ + + D +WNS+ISG
Sbjct: 441 ACSVFELM------------------------------------VEKDSVSWNSLISGLD 464
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q +A + F +M+ TG +PS + S LS+CA L + LG++ H ++ L+ D S
Sbjct: 465 QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVS 524
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRN-GEYESAVEIFDLM 242
++ AL+++Y + G + + F + P+ D WN++I + AV+ F M
Sbjct: 525 VSNALLALYAETGCFTECLKV---FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQM 581
Query: 243 QQEKVKPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
+ + +F+ +LSA H AL + + DD + ++
Sbjct: 582 MRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG------NALLSCY 635
Query: 298 GRSGRLDEARELIRELPE 315
G+ G ++E ++ + E
Sbjct: 636 GKCGEMNECEKIFARMSE 653
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 201/383 (52%), Gaps = 42/383 (10%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VTFI+++SA +SL + Q+H L LK DT IG AL+ Y KCG + +F
Sbjct: 439 VTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFAR 498
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ +R D +WNSMISG+ + +
Sbjct: 499 MSETR-----------------------------------DEVSWNSMISGYIHNELLHK 523
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A L M G ++LSACA ++ L+ G E H IRA L D + +AL+
Sbjct: 524 AMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVD 583
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG+ +A RFF+ ++ + WN+MISGY R+G E A+++F M + P+
Sbjct: 584 MYSKCGRIDYASRFFELMPLR--NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDH 641
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+FV VLSAC H G V++ + F M + + L P+ EHF CMVDLLGR+G+LDE + I
Sbjct: 642 VTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFIN 701
Query: 312 ELP-EPTVSVYHSLLGACWCHL---NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+P +P V ++ ++LGAC C N++LG A L E+EP+N +V+L+N+YA +
Sbjct: 702 SMPMKPNVLIWRTVLGAC-CRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEK 760
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV + R + + + K G S
Sbjct: 761 WEDVAKARTAMKEAAVKKEAGCS 783
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF +++SACAS+ L+ G +VH ++ +SD ++G+ALVDMY KCG + A F
Sbjct: 539 DSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFF 598
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
EL RN+ +WN+MI+G +G EKA++LF + +G PD T+ ++S S +G
Sbjct: 599 -ELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 657
Query: 130 FEAFKLFEKM 139
E F+ F+ M
Sbjct: 658 EEGFEHFKSM 667
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 151/347 (43%), Gaps = 51/347 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF S+I+ + R++H ++K + + L+++Y++ G L A +F
Sbjct: 98 SSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLF 157
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ +RN++TW +I+G NG+ ++A F + GF P+ + S +
Sbjct: 158 DEMS-NRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRA------- 209
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
C S S C KLG + HG + + D + L
Sbjct: 210 --------------------CQESGPSGC------KLGVQIHGLISKTRYGSDVVVCNVL 243
Query: 190 ISMYMKC-GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV- 247
ISMY C + AR FD I+ + WN++IS Y R G+ SA ++F MQ+E +
Sbjct: 244 ISMYGSCLDSANDARSVFDGIGIR--NSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLG 301
Query: 248 ---KPNSA-SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
KPN A S +VL G A I T ++D+ K +V++ +SG +
Sbjct: 302 FSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLNDN-----KVAIGNGLVNMYAKSGAI 356
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+A + + E ++SL+ L+ + E A ++ + PE
Sbjct: 357 ADACSVFELMVEKDSVSWNSLISG----LDQNECSEDAAEMFSLMPE 399
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 218/389 (56%), Gaps = 8/389 (2%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L +P++ TF V+ + + FGRQ+HG + S + T L+ MY CG L
Sbjct: 110 LCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGD 169
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F E+ +++ WN ++AG G ++A L E + + + +W +ISG++
Sbjct: 170 ARKMFDEML-VKDVNVWNALLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYA 226
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ G EA ++F++M + P + +VLSACADL +L+LG+ +V +N+ S
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVS 286
Query: 185 MATALISMYMKCGQPSWARRFFDQFE-IKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ A+I MY K G + A D FE + + W +I+G +G A+ +F+ M
Sbjct: 287 LNNAVIDMYAKSGNITKA---LDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV 343
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ V+PN +F+A+LSAC H G VD ++F M +G+ P EH+GCM+DLLGR+G+L
Sbjct: 344 KAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL 403
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E+I+ +P + +++ SLL A H + +LGE +L ++EP N +++L+N+Y
Sbjct: 404 READEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLY 463
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+ LGRW++ +R M+ + K+ G S+
Sbjct: 464 SNLGRWDESRMMRNMMKGIGVKKMAGESS 492
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 159/400 (39%), Gaps = 74/400 (18%)
Query: 15 ISVISACASLLYLQFGRQVHGLTLKIEKQSD-TMIGTALVDMYLKCGCLPCAHNVFQELK 73
I+ +S + L + ++HG LK KQS MI T L
Sbjct: 5 INALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGL--------------------- 43
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW--NSMISGFSQL---GM 128
+R+ L I G A +F +P P T+ N+MI S L
Sbjct: 44 -NRDNLNVAKFIEACSNAGHLRYAYSVFT------HQPCPNTYLHNTMIRALSLLDEPNA 96
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++ K+ + P VL +S + G++ HG V+ + + T
Sbjct: 97 HSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE--------------- 233
LI MY CG AR+ FD+ +K D WNA+++GYG+ GE +
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVK--DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRN 214
Query: 234 ------------------SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
A+E+F M E V+P+ + +AVLSAC G ++ +I +
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICS 274
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
+D G+ ++D+ +SG + +A ++ + E V + +++ H +
Sbjct: 275 YVDHR-GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGA 333
Query: 336 LGEEMAMKLQE--MEPENPTPFVILSNIYAGLGRWEDVGR 373
M ++ + + P + T ILS + +G W D+G+
Sbjct: 334 EALAMFNRMVKAGVRPNDVTFIAILSAC-SHVG-WVDLGK 371
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/385 (35%), Positives = 214/385 (55%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F +SA ASL L G +HG KI D IG++L+D+Y KCG
Sbjct: 313 KPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L +N++ WN+M+ G +NGR E+ ELFE + + + +W ++J+G+ +
Sbjct: 373 VF-DLILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEK----NDXSWGTIJAGYLENE 427
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ ++F + +G P+ +SVL ACA +++L G HG +I+ + D + T
Sbjct: 428 QCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGT 487
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
AL MY KCG +++ F++ K + W MI G +G ++ +F+ M++ +
Sbjct: 488 ALTDMYAKCGDIGSSKQVFERMPEKNEIS--WTVMIQGLAESGFAVESLILFEEMERTSE 545
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN ++VL AC H G VDK L F M+ +G+KPK +H+ C+VDLL RSGRL EA
Sbjct: 546 VAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEA 605
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E IR +P +P + + +LL C + + + E A KL ++ N +V+LSNIYA
Sbjct: 606 EEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASA 665
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV IR+++ ++ L K G S
Sbjct: 666 GRWIDVSNIRKLMREKGLKKSGGCS 690
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 45/389 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTF SV+ AC L G + GL +K + + +L+ + L+ G + A V
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R++++W ++ + G +A +F+ + + +W++MI+ +SQ G
Sbjct: 242 FDRME-KRDVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGY 296
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA KLF KM G P++ C LSA A L AL G HGHV + ++KD + ++
Sbjct: 297 AEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSS 356
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG------------------ 230
LI +Y KCG+P R FD I + WN+M+ GY NG
Sbjct: 357 LIDLYCKCGKPDDGRLVFDL--ILEKNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDX 414
Query: 231 -------------EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ E +E+F+ + PN ++F +VL AC +DK + + +
Sbjct: 415 SWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
G++ + D+ + G + ++++ +PE + ++ S
Sbjct: 475 -IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL---AESGFA 530
Query: 338 EEMAMKLQEMEPEN---PTPFVILSNIYA 363
E + +EME + P ++LS ++A
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 138/255 (54%), Gaps = 12/255 (4%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD ++ ++ Y++ G L A +F E+ RN ++W+ +I+G+M GR E++M FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMP-ERNEVSWSALISGLMKYGRVEESMWYFE- 142
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
F+ + +W + ISGF + G+ FEA KLF ++ +G+ P+ TSV+ AC +L
Sbjct: 143 --RNPFQ-NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
LG G V++A S++ +LI++ ++ G+ ARR FD+ E + D W A++
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAIL 257
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
Y G+ A IFD M + N S+ A+++ +G+ ++AL++F+ M + G
Sbjct: 258 DAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GF 312
Query: 284 KPKQEHFGCMVDLLG 298
KP F C + L
Sbjct: 313 KPNISCFACTLSALA 327
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 70/242 (28%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC------------- 196
CV S+L ++ + G H H+I+ + +A L+ +Y+ C
Sbjct: 24 CV-SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 197 ------------------GQPSWARRFFDQ----------------------------FE 210
G AR FD+ FE
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 211 IKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
P + W A ISG+ RNG A+++F + + V+PN +F +V+ ACG G
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 270 ALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ I ++ +K EH+ ++ L R G +D AR + + + V + ++L
Sbjct: 203 GMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 326 GA 327
A
Sbjct: 258 DA 259
>gi|297823173|ref|XP_002879469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325308|gb|EFH55728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 583
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/387 (36%), Positives = 206/387 (53%), Gaps = 43/387 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF SVI +CA L L+ G+ VH + DT + ALV Y KCG + A V
Sbjct: 105 PSNYTFTSVIKSCADLSALKIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQV 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + EK++ WNS++SGF Q G+
Sbjct: 165 FDRMP---------------------EKSV---------------VAWNSLVSGFEQNGL 188
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A ++F +M+ +G P S+LSACA A+ LG H +++ L+ + + TA
Sbjct: 189 AEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTA 248
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KV 247
LI++Y +CG AR FD+ +K + A W AMIS YG +G + AV++F+ M+ +
Sbjct: 249 LINLYSRCGDVGKAREVFDK--MKETNVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGS 306
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ +FVAVLSAC HAG V+ ++ M + + L P EH C+VD+LGR+G LDEA
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEDGRSVYKRMTESYRLIPGVEHHVCIVDMLGRAGFLDEAY 366
Query: 308 ELIRELP----EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
I++L +++ ++LGAC H N DLG E+A +L +EPENP V+LSNIYA
Sbjct: 367 RFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPENPGHHVMLSNIYA 426
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+ ++V IR + L K G S
Sbjct: 427 LSGKTDEVSHIRDRMMRNNLRKQVGYS 453
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 147/286 (51%), Gaps = 16/286 (5%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD +NS+I S+L + + +M S+ + PS TSV+ +CADLSALK+GK
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALKIGKGV 129
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H + + D + AL++ Y KCG AR+ FD+ K WN+++SG+ +NG
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEAARQVFDRMPEK--SVVAWNSLVSGFEQNG 187
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
E A+ +F M++ +P+SA+FV++LSAC G + + + + GL +
Sbjct: 188 LAEDAIRVFYQMRESGFEPDSATFVSLLSACAQTGAISLGSWVHQYIVSE-GLDVNVKLG 246
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
+++L R G + +ARE+ ++ E V+ + +++ A H G++ +ME +
Sbjct: 247 TALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTH---GYGKQAVDLFNKMEDD 303
Query: 351 -----NPTPFVILSNIYAGLGRWEDVGR--IRQMINDRQLTKLPGI 389
N FV + + A G ED GR ++M +L +PG+
Sbjct: 304 CGSIPNNVTFVAVLSACAHAGLVED-GRSVYKRMTESYRL--IPGV 346
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S TF+S++SACA + G VH + + +GTAL+++Y +CG + A
Sbjct: 205 EPDSATFVSLLSACAQTGAISLGSWVHQYIVSEGLDVNVKLGTALINLYSRCGDVGKARE 264
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQL 126
VF ++K + N+ W MI+ +G ++A++LF + + G P+ T+ +++S +
Sbjct: 265 VFDKMKET-NVAAWTAMISAYGTHGYGKQAVDLFNKMEDDCGSIPNNVTFVAVLSACAHA 323
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ + ++++M +S ++P G E H
Sbjct: 324 GLVEDGRSVYKRMTESYRLIP--------------------GVEHH-------------- 349
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPD--DPAFWNAMISGYGRNGEYESAVEI 238
++ M + G A RF Q + + PA W AM+ + Y+ VEI
Sbjct: 350 -VCIVDMLGRAGFLDEAYRFIQQLDATGNATAPALWTAMLGACKMHRNYDLGVEI 403
>gi|330689867|gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
Length = 644
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 213/389 (54%), Gaps = 9/389 (2%)
Query: 8 EPNSVTFISVISAC--ASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPC 64
E N+ + +SAC A L L GR +HG + K + + +LV MY K G +
Sbjct: 207 EGNAESVAVALSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDD 266
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATWNSMISG 122
A VF+E G RN +TWN +I G ++A+ + + G P+ +W+++I G
Sbjct: 267 AREVFRE-AGERNTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVAPNVMSWSAVIGG 325
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
F+ G A +LF +MQ + P++ + +VLSAC + A++LG+E H IR+ +++
Sbjct: 326 FASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSMVDRH 385
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+A LI+MY KCG+ + AR FD +K D WN+M++GYG +G + A+ +F M
Sbjct: 386 SLVANGLINMYAKCGRVADARTVFDG--MKSRDLVSWNSMLAGYGMHGLCDDALAVFTDM 443
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ KV P+ +FVAVLSAC HAG V + ++F M + + P EH+ CMVDLLGR+G
Sbjct: 444 AEAKVDPDGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTCMVDLLGRAGL 503
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L EA E I +P + V+ +LL +C H ++ + E K + +++N+
Sbjct: 504 LKEASEFIETMPMGADLCVWGALLNSCRIHGDAAMAEATIAKALQAGVVTTGNHTLITNL 563
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W+D R+R M + L K PG S
Sbjct: 564 YAACGMWDDSKRVRVMTREAGLRKNPGQS 592
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 159/392 (40%), Gaps = 47/392 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T + A S + H L L + D + L+ Y + G AH+V
Sbjct: 74 PNSYTLPLALRAATSPIASAI--HAHALHLGLHAHPD--VAGQLLAAYARHGRADEAHHV 129
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFK-PDPATWNSMISGFSQLG 127
F + R ++WNT+I+ + AM F +A G PD TW +++S ++ G
Sbjct: 130 FDAMPSKRATMSWNTLISAYSVCCDPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCG 189
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSAC---ADLSALKLGKETHGHVIRADLNKDES 184
+LF M +G + + V LSAC DL AL G+ HG+ + + +
Sbjct: 190 KHPVVLELFGDMHRSGCEGNAESVAVALSACPYAGDL-ALAKGRAIHGYGVAKGVVRGYL 248
Query: 185 MAT-ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
T +L+ MY K G+ AR F E + WNA+I+ Y G + A+ + M+
Sbjct: 249 FVTNSLVCMYGKLGKMDDAREVFR--EAGERNTVTWNALITSYAAAGMCDEALNVLVRME 306
Query: 244 QEK--VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
Q V PN S+ AV+ +G ++AL++F
Sbjct: 307 QRGGMVAPNVMSWSAVIGGFASSGDNERALELF--------------------------- 339
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFVILSN 360
R + ++ P V ++L AC L LG E+ A ++ M + L N
Sbjct: 340 -----RRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSMVDRHSLVANGLIN 394
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
+YA GR D + + R L + AG
Sbjct: 395 MYAKCGRVADARTVFDGMKSRDLVSWNSMLAG 426
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/385 (35%), Positives = 214/385 (55%), Gaps = 9/385 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F +SA ASL L G +HG KI D IG++L+D+Y KCG
Sbjct: 313 KPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRL 372
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF +L +N++ WN+M+ G +NGR E+ ELFE + + + +W ++I+G+ +
Sbjct: 373 VF-DLILEKNVVCWNSMVGGYSINGRLEETEELFELIPEK----NDVSWGTIIAGYLENE 427
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ ++F + +G P+ +SVL ACA +++L G HG +I+ + D + T
Sbjct: 428 QCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGT 487
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
AL MY KCG +++ F++ K + W MI G +G ++ +F+ M++ +
Sbjct: 488 ALTDMYAKCGDIGSSKQVFERMPEK--NEISWTVMIQGLAESGFAVESLILFEEMERTSE 545
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V PN ++VL AC H G VDK L F M+ +G+KPK +H+ C+VDLL RSGRL EA
Sbjct: 546 VAPNELMLLSVLFACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEA 605
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E IR +P +P + + +LL C + + + E A KL ++ N +V+LSNIYA
Sbjct: 606 EEFIRTIPFQPEANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASA 665
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW DV IR+++ ++ L K G S
Sbjct: 666 GRWIDVSNIRKLMREKGLKKSGGCS 690
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 45/389 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN VTF SV+ AC L G + GL +K + + +L+ + L+ G + A V
Sbjct: 182 PNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRV 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R++++W ++ + G +A +F+ + + +W++MI+ +SQ G
Sbjct: 242 FDRME-KRDVVSWTAILDAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGY 296
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA KLF KM G P++ C LSA A L AL G HGHV + ++KD + ++
Sbjct: 297 AEEALKLFSKMVQEGFKPNISCFACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSS 356
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG------------------ 230
LI +Y KCG+P R FD I + WN+M+ GY NG
Sbjct: 357 LIDLYCKCGKPDDGRLVFDL--ILEKNVVCWNSMVGGYSINGRLEETEELFELIPEKNDV 414
Query: 231 -------------EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
+ E +E+F+ + PN ++F +VL AC +DK + + +
Sbjct: 415 SWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKI 474
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLG 337
G++ + D+ + G + ++++ +PE + ++ S
Sbjct: 475 -IKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISWTVMIQGL---AESGFA 530
Query: 338 EEMAMKLQEMEPEN---PTPFVILSNIYA 363
E + +EME + P ++LS ++A
Sbjct: 531 VESLILFEEMERTSEVAPNELMLLSVLFA 559
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 137/255 (53%), Gaps = 12/255 (4%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD ++ ++ Y++ G L A +F E+ RN ++W+ +I+G+M GR E++M FE
Sbjct: 85 SDLVVSNCMISAYVQWGNLVQARLLFDEMP-ERNEVSWSALISGLMKYGRVEESMWYFER 143
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ + +W + ISGF + G+ FEA KLF ++ +G+ P+ TSV+ AC +L
Sbjct: 144 NPFQ----NVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
LG G V++A S++ +LI++ ++ G+ ARR FD+ E + D W A++
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKR--DVVSWTAIL 257
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
Y G+ A IFD M + N S+ A+++ +G+ ++AL++F+ M + G
Sbjct: 258 DAYVETGDLREARRIFDEMPER----NEISWSAMIARYSQSGYAEEALKLFSKMVQE-GF 312
Query: 284 KPKQEHFGCMVDLLG 298
KP F C + L
Sbjct: 313 KPNISCFACTLSALA 327
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 89/242 (36%), Gaps = 70/242 (28%)
Query: 150 CVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC------------- 196
CV S+L ++ + G H H+I+ + +A L+ +Y+ C
Sbjct: 24 CV-SLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIVKEF 82
Query: 197 ------------------GQPSWARRFFDQ----------------------------FE 210
G AR FD+ FE
Sbjct: 83 DGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMWYFE 142
Query: 211 IKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
P + W A ISG+ RNG A+++F + + V+PN +F +V+ ACG G
Sbjct: 143 RNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGDFGL 202
Query: 270 ALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ I ++ +K EH+ ++ L R G +D AR + + + V + ++L
Sbjct: 203 GMSILGLV-----VKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAIL 257
Query: 326 GA 327
A
Sbjct: 258 DA 259
>gi|356554965|ref|XP_003545811.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
mitochondrial-like [Glycine max]
Length = 517
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/385 (32%), Positives = 215/385 (55%), Gaps = 9/385 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ +F + A A+ Y FG Q+H L K+ Q + T L+ MY G L A VF
Sbjct: 136 DTFSFAFLCHASANPNYTHFGTQLHALIFKVGFQFQVYVQTRLLQMYSSSGLLVEAAQVF 195
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E++ RN+++WN I G++ G E A +F + +W +I G+++
Sbjct: 196 YEMQ-HRNLVSWNVFITGLIKLGEVELACSVFNQMPARSV----VSWTLVIDGYTRRNQP 250
Query: 130 FEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK-DESMAT 187
+A LF KM + G+ P+ + ++ A A++ +K+ + HG+V + N D +
Sbjct: 251 IKALTLFRKMIEVDGIEPTEVTLLTIFPAIANIGCIKICQSVHGYVEKRGFNAFDVRITN 310
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y KCG + RFF + + + W + ISG+ NG A+E F+ M++ +
Sbjct: 311 ALLDLYAKCGCIASVSRFFQEIPDQRRNLVSWTSTISGFAMNGMGREALESFESMEKAGL 370
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +F+ VLSAC H G V++ + F M D+ L P +H+GC++D+LGR+GRL+EA
Sbjct: 371 RPNHVTFLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGRAGRLEEAE 430
Query: 308 ELIRELPEPTVS--VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
++ ++P + ++ +LLGAC H N ++G+ + K+ EME + +V++SNI G+
Sbjct: 431 KIALQVPHEVANAVMWRTLLGACNVHNNVEIGQRVTNKILEMERGHGGDYVLMSNILVGV 490
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR++D ++R+MI+ R KLPG S
Sbjct: 491 GRFKDAEKLREMIDKRIAFKLPGYS 515
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQS----DTMIGTALVDMY 56
M E EP VT +++ A A++ ++ + VHG +EK+ D I AL+D+Y
Sbjct: 260 MIEVDGIEPTEVTLLTIFPAIANIGCIKICQSVHGY---VEKRGFNAFDVRITNALLDLY 316
Query: 57 LKCGCLPCAHNVFQELKGS-RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
KCGC+ FQE+ RN+++W + I+G +NG +A+E FE + G +P+ T
Sbjct: 317 AKCGCIASVSRFFQEIPDQRRNLVSWTSTISGFAMNGMGREALESFESMEKAGLRPNHVT 376
Query: 116 WNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADL 161
+ ++S S G+ E F KM + +VP +K CV +L L
Sbjct: 377 FLGVLSACSHGGLVEEGINFFVKMVKDWCLVPDIKHYGCVIDMLGRAGRL 426
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/385 (36%), Positives = 211/385 (54%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP++ T+ + ACA+LL L+ GR+VH L D + LVDMY KCGC+ A
Sbjct: 160 EPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARA 219
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D WNSMI+ + Q G
Sbjct: 220 VFDRIR------------------------------------VRDSVVWNSMIAAYGQNG 243
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA L M + G+ P++ + S +SA AD +AL G+E HG R ++ + + T
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-K 246
+L+ MY K G AR F+Q + + WNAMI GYG +G ++ A+++F+ M+ E +
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQLMKR--ELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQ 361
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P++ +FV VLSAC H G V +A + F +M D + +KP +HF C+VD+LG +GR +EA
Sbjct: 362 VTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEA 421
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+LI+ +P +P ++ +LL C H N +LGE KL E+EPE+ +V+LSNIYA
Sbjct: 422 YDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQS 481
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE R+R+++ +R L K+ G S
Sbjct: 482 GKWEKAARVRKLMTNRGLKKIIGCS 506
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 159/363 (43%), Gaps = 51/363 (14%)
Query: 5 LSDEPNSVT-FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
++ PNS + SV+ +C + L GRQ+HG L DT++ T LVD+Y CG +
Sbjct: 55 IASSPNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVG 114
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F + RN+ W N +I +
Sbjct: 115 HARRLFDGMP-KRNVFLW-----------------------------------NVLIRAY 138
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
++ G A +L+ M G+ P L ACA L L+ G+E H V+ +D
Sbjct: 139 ARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHERVLGTHWGEDM 198
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ L+ MY KCG AR FD+ ++ D WN+MI+ YG+NG A+ + M
Sbjct: 199 FVCAGLVDMYAKCGCVDDARAVFDRIRVR--DSVVWNSMIAAYGQNGRPMEALSLCRDMA 256
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK---PKQEHFGC-MVDLLGR 299
V P A+ V+ +SA A + + ++ FG + +Q+ +VD+ +
Sbjct: 257 ANGVGPTIATLVSTISAAADAAALPRGRELH-----GFGWRRGFDRQDKLKTSLVDMYAK 311
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ---EMEPENPTPFV 356
SG + AR L +L + + +++++ H + D ++ K++ ++ P+N T
Sbjct: 312 SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVG 371
Query: 357 ILS 359
+LS
Sbjct: 372 VLS 374
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 200/374 (53%), Gaps = 42/374 (11%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
AC+ L G+ VHG ++ Q D + ++L+D+Y KCG + A +F+ +
Sbjct: 317 ACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP------ 370
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
K +WN MISG+ G F+A +LF +M
Sbjct: 371 ------------------------------KTTTVSWNVMISGYVTEGKLFDALRLFGEM 400
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
+ + P TSVL+AC+ L+AL+ G+E H ++ +L +E + AL+ MY KCG
Sbjct: 401 SKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAV 460
Query: 200 SWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
A F F+ P+ D W +MI+ YG +G A+E+F M Q VKP+ +F+A+L
Sbjct: 461 EEA---FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAIL 517
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT- 317
SAC HAG VD L F M + +G+ P+ EH+ C++ LLGR+GRL EA E+++ PE +
Sbjct: 518 SACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISD 577
Query: 318 -VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ 376
+ +L AC H N DLG E+A L + +P++ + ++ILSN+YA G+W++V +R
Sbjct: 578 DFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRS 637
Query: 377 MINDRQLTKLPGIS 390
+ D L K PG S
Sbjct: 638 KMKDLGLKKNPGCS 651
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/376 (29%), Positives = 183/376 (48%), Gaps = 45/376 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+SVT + IS+CA LL L GR++H + + D+ + ALVDMY KCG L A
Sbjct: 204 EPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIE 263
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+++ T++A WNSMI+G+ G
Sbjct: 264 VFEQMPN-------KTVVA-----------------------------WNSMINGYGFKG 287
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+LF++M S G+ P+L +TS L AC+ + L GK HG++IR + D + +
Sbjct: 288 DGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNS 347
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+L+ +Y KCG+ A F++ P WN MISGY G+ A+ +F M +
Sbjct: 348 SLMDLYFKCGKVESAETI---FKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF 404
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V+P++ +F +VL+AC ++K +I ++ + L + G ++D+ + G ++EA
Sbjct: 405 VEPDAITFTSVLAACSQLAALEKGREIHNLIVER-NLGNNEVVMGALLDMYAKCGAVEEA 463
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILSNI-YA 363
+ + LPE + + S++ A H E+ M ++P+ T ILS +A
Sbjct: 464 FGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHA 523
Query: 364 GLGRWEDVGRIRQMIN 379
GL + + QMIN
Sbjct: 524 GLVD-DGLYHFNQMIN 538
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T+ SV+ AC L + G+ +H +K D ++G++LV MY KC CA
Sbjct: 103 KPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVK 162
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ D A WN++IS + Q G
Sbjct: 163 LFDEMP------------------------------------DKDVACWNTVISCYYQSG 186
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F M+ G P +T+ +S+CA L L G+E H ++ + D ++
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSA 246
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCGQ A F+Q K WN+MI+GYG G+ S +++F M E V
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKT--VVAWNSMINGYGFKGDGISCIQLFKRMYSEGV 304
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP + + L AC + + + + + + ++P ++DL + G+++ A
Sbjct: 305 KPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRN-RIQPDIFLNSSLMDLYFKCGKVESAE 363
Query: 308 ELIRELPEPTVSVYHSLL 325
+ + +P+ T ++ ++
Sbjct: 364 TIFKLMPKTTTVSWNVMI 381
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 39/315 (12%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
I ++ A + L+ G+ +H + + Q+D + L+ +Y+ C A NVF ++
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQLGMRFEA 132
I N ++AG N ++A+ LF+ L + KPD T+
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTY---------------- 109
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
SVL AC L + LG+ H +++ L D + ++L+ M
Sbjct: 110 -------------------PSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGM 150
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC + A + FD E+ D A WN +IS Y ++G++E A+ F +M++ +P+S
Sbjct: 151 YAKCNEFECAVKLFD--EMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSV 208
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ +S+C +D+ +I + + G + +VD+ G+ G+L+ A E+ +
Sbjct: 209 TITTAISSCARLLDLDRGREIHKELVNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFEQ 267
Query: 313 LPEPTVSVYHSLLGA 327
+P TV ++S++
Sbjct: 268 MPNKTVVAWNSMING 282
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 91/152 (59%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+++TF SV++AC+ L L+ GR++H L ++ ++ ++ AL+DMY KCG + A
Sbjct: 406 EPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFG 465
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ L R++++W +MI +GR +A+ELF + KPD T+ +++S S G
Sbjct: 466 VFKCLP-ERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAG 524
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
+ + F +M + G++P ++ C+ ++L
Sbjct: 525 LVDDGLYHFNQMINVYGIIPRIEHYSCLITLL 556
>gi|449435364|ref|XP_004135465.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Cucumis sativus]
Length = 614
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 206/384 (53%), Gaps = 9/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF ++ CA + G VHG +K + D + + L+ MY + CL H V
Sbjct: 109 PDNYTFNFLVRTCAQSA-CEAGPAVHGALIKHGFEYDPHVESGLIFMYAEMSCLSSCHRV 167
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ ++ +++ TM++ G A LF+ + F +WN+MI+G++Q G
Sbjct: 168 FESVQKP-DLVCQTTMVSACAKCGDIGFARNLFDSMPQRDF----VSWNAMIAGYAQRGQ 222
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF+ MQ G+ + + SV++AC L AL GK H ++ + + ++ TA
Sbjct: 223 SREALNLFKLMQMDGVKVNEVSMISVVTACTHLGALDQGKWAHAYIEKNKIQMTVNLGTA 282
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A + F +E+ + W+ I G NG + +E+F M+ E +
Sbjct: 283 LVDMYFKCGNVDRALKVF--WEMNEKNVYTWSTAIGGLAMNGYGQKCLELFSFMKHEGIA 340
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F++VL C G VD+ F M D G++P+ EH+GCMVDL GR+GRL+EA
Sbjct: 341 PNEITFISVLKGCSVVGFVDEGRSHFDSMKRDHGIEPRLEHYGCMVDLYGRAGRLEEALN 400
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P +P + +LL AC + N +LGE + KL E+E +N +V LSNIYA G
Sbjct: 401 FINTMPLKPHAGAWGALLNACRMYKNMELGEFASRKLIEVEGKNHGAYVSLSNIYADTGN 460
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+ V +RQ + ++KLPG S
Sbjct: 461 WDRVSNVRQSMKAEGISKLPGCSV 484
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/378 (34%), Positives = 214/378 (56%), Gaps = 11/378 (2%)
Query: 18 ISACASLLYLQ--FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
++A A + +L+ G Q+H + ++ SD + +L+ Y CG + A +VF +
Sbjct: 74 LNAAAKIPHLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTT-D 132
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
++I WN MI+G + +G A ELF+ + +W ++I ++Q+ EA ++
Sbjct: 133 KDIFCWNVMISGYVKSGNLACARELFDVMPARNV----VSWTTVIGAYAQMKQPVEAVEV 188
Query: 136 FEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +MQ G+ P + SVLSAC DL A+ LG+ H V+R L + A+I MY+
Sbjct: 189 FRRMQVEEGIEPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYV 248
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
K G A F+ + K W +I+G+ +G A+E+F M+ E V PN +F
Sbjct: 249 KLGCVRKAVEVFEGMDQK--SVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTF 306
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
+A+LSAC H G D F +M + +K + EH+GCMVDLLGR+G L EA++L++++P
Sbjct: 307 LAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMP 366
Query: 315 -EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGR 373
+ +++ +LL A H +++LG++ + L E+EP N +++LSNIYA RW+DV +
Sbjct: 367 FKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSK 426
Query: 374 IRQMINDRQLTKLPGISA 391
+R+ + DR L +PG S+
Sbjct: 427 LRKQMKDRGLRNVPGASS 444
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ V +SV+SAC L + G VH ++ + A++DMY+K GC+ A
Sbjct: 199 EPDGVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVE 258
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ + ++++TW T+IAG L+G +A+E+F + E P+ T+ +++S S +G
Sbjct: 259 VFEGMD-QKSVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVG 317
Query: 128 M 128
+
Sbjct: 318 L 318
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 215/368 (58%), Gaps = 11/368 (2%)
Query: 26 YLQFGR--QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNT 83
YLQ GR + + + +I + D++ +++ Y CG A +FQE+ +++++WNT
Sbjct: 336 YLQSGRMDEANEIFSQISVR-DSVCWNSMITGYAHCGRTDEALRLFQEMV-CKDMVSWNT 393
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
MIA G+ +KA+E+F +E + + +WNS+I+G+ Q G+ FEA F M+ G
Sbjct: 394 MIAAYAQAGQMDKALEMF----NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQG 449
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
P + L A A+L+AL +G + H I+ D + A+++MY K G+ A
Sbjct: 450 EKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAE 509
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F EIK D WN++I+GY NG + AVE+F++M + P+ +F +LSAC H
Sbjct: 510 NVFA--EIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNH 567
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYH 322
G VD+ L +F M + + +KP+ EH+ C+++LLGR GRL+EA E+++ + + ++
Sbjct: 568 GGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWG 627
Query: 323 SLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQ 382
+LL AC H N +L + A +L +EP+N + +V+LSN++A GRW+ V R+R ++ + +
Sbjct: 628 ALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENK 687
Query: 383 LTKLPGIS 390
K PG S
Sbjct: 688 AEKQPGCS 695
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 86/159 (54%), Gaps = 5/159 (3%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ T + + A A+L L G Q+H LT+K +D + A++ MY K G +P A
Sbjct: 450 EKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAE 509
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
NVF E+K +++++WN++IAG LNG ++A+ELFE + G PD T+ ++S +
Sbjct: 510 NVFAEIK-XKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHG 568
Query: 127 GMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADL 161
G + LF+ M T + CV ++L L
Sbjct: 569 GFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRL 607
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G + A VF ++ RNI+T+N+MI+ NGR A ELF+ + +WN
Sbjct: 27 RSGRIEEAVAVFLKMT-ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNL----VSWN 81
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
SMI+G+ + +A +LF++M + T +++ + L+ +E +
Sbjct: 82 SMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFN--LLP 135
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D +D ALI+ Y K A++ FD+ +K + WN+++SGY +NG+ + ++
Sbjct: 136 D-KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVK--NVVSWNSILSGYTKNGKMQLGLQ 192
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F+ M + N S+ ++ G +D A F + P + M+
Sbjct: 193 FFEAMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIP-----TPNVVSWVTMLSGF 243
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
GR+ EAR L E+P + +++++GA ++ + ++ EM ++ +
Sbjct: 244 AHYGRMTEARNLFNEMPTKNLVSWNAMIGA---YVRENQIDDAYKLFMEMPEKDSVSWTA 300
Query: 358 LSNIYAGLGR 367
+ N Y +G+
Sbjct: 301 MINGYVRVGK 310
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 47/310 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ DT+ AL+ Y K A +F E+ +N+++WN++++G NG+ + ++ FE
Sbjct: 137 KQDTVCRNALIAGYAKKRLFREAKKLFDEML-VKNVVSWNSILSGYTKNGKMQLGLQFFE 195
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + +WN M+ G+ +G A+ F+K+ + P++ ++LS A
Sbjct: 196 AMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSGFA--- 244
Query: 163 ALKLGKETHGHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
G+ T + ++ K+ A+I Y++ Q A + F E+ D W A
Sbjct: 245 --HYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF--MEMPEKDSVSWTA 300
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD--- 278
MI+GY R G+ A EI +LM + N A+ A+++ +G +D+A +IF+ +
Sbjct: 301 MINGYVRVGKLLQAREILNLMPYK----NIAAQTAMINGYLQSGRMDEANEIFSQISVRD 356
Query: 279 ----------------DDFGLKPKQE-------HFGCMVDLLGRSGRLDEARELIRELPE 315
D L+ QE + M+ ++G++D+A E+ E+ E
Sbjct: 357 SVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQE 416
Query: 316 PTVSVYHSLL 325
V ++SL+
Sbjct: 417 RNVVSWNSLI 426
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 205/382 (53%), Gaps = 44/382 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI---GTALVDMYLKCGCLPCAHNVF 69
T+ SV +A A+ LQFGR VHG+ LK D M+ A+ D Y KCG L VF
Sbjct: 373 TYCSVFNAIAASKSLQFGRVVHGMVLKC--GLDLMVVSVNNAIADAYSKCGFLEDVRKVF 430
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+I++W T +++ +SQ +
Sbjct: 431 DRME-ERDIVSWTT-----------------------------------LVTAYSQSSLG 454
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F M+ G P+ +SVL +CA L L+ G++ HG + +A L+ ++ + +AL
Sbjct: 455 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 514
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + A + FD+ I D W A+ISGY ++G E A+++F M+ +K
Sbjct: 515 IDMYAKCGSITEAGKVFDK--ISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKA 572
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ + + VL AC H G V++ L F M+D +G+ P+ EH+ C++DLLGR GRLD+A E
Sbjct: 573 NAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEF 632
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
IR++P EP V+ +LLG C H N +LGE A K+ + PE +V+LSN Y G +
Sbjct: 633 IRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSY 692
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
ED +R ++ D+ + K PG S
Sbjct: 693 EDGLSLRNVMKDQGVKKEPGYS 714
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 152/358 (42%), Gaps = 63/358 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + ++I +C L L+ G+ VH + + + T+L++MY K G + ++ V
Sbjct: 165 PDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWV 224
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F N++T + + +WN+MISG + G+
Sbjct: 225 F-------NMMT-----------------------------EHNQVSWNAMISGCTSNGL 248
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF LF +M++ P++ + SV A L + +GKE + + + TA
Sbjct: 249 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 308
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD I WNAMISGY ++G + A+E++ M Q +
Sbjct: 309 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 368
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL----------- 297
+ ++ +V +A + K+LQ FG C +DL+
Sbjct: 369 SDLYTYCSVFNAIAAS----KSLQ--------FGRVVHGMVLKCGLDLMVVSVNNAIADA 416
Query: 298 -GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G L++ R++ + E + + +L+ A + S LGEE M E P
Sbjct: 417 YSKCGFLEDVRKVFDRMEERDIVSWTTLVTA---YSQSSLGEEALATFCLMREEGFAP 471
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 12/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SV+ +CASL +L++GRQVHGL K ++ I +AL+DMY KCG + A V
Sbjct: 471 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 530
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +I++W +I+G +G E A++LF + G K + T ++ S GM
Sbjct: 531 FDKISNP-DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 589
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F++M+ G+VP ++ ++ + L E + + + +E +
Sbjct: 590 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAME---FIRKMPMEPNEMVWQ 646
Query: 188 ALISMYMKCGQPSW----ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L+ G AR+ I+P+ A + + + Y G YE + + ++M+
Sbjct: 647 TLLGGCRVHGNVELGEIAARKILS---IRPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 703
Query: 244 QEKVK 248
+ VK
Sbjct: 704 DQGVK 708
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 41/298 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
I V+ CA ++ + VHGL LK E + ++ +Y KC A VF E
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ RN+ +W M I G ++ G+ F+
Sbjct: 127 MP-QRNVFSWTVM-----------------------------------IVGSTEHGLFFD 150
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
FK F +M ++G++P ++++ +C L +L+LGK H ++ ++T+L++
Sbjct: 151 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 210
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY K G + F+ + + WNAMISG NG + A ++F M+ PN
Sbjct: 211 MYAKLGSIEDSYWVFNM--MTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNM 268
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ V+V A G V+ ++ + G++ ++D+ + G L +AR +
Sbjct: 269 YTLVSVSKAVGKLVDVNMGKEVQNCA-SELGIEGNVLVGTALIDMYSKCGSLHDARSV 325
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-- 186
R E+ + E Q T ++ + VL CA+ +++ K HG V++++ + M
Sbjct: 49 RPESIGISETYQQT----QVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLF 104
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE 245
+Y KC + A FD+ P F W MI G +G + + F M
Sbjct: 105 NHAAHVYSKCSEFRAACGVFDEM---PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNS 161
Query: 246 KVKPNSASFVAVLSAC 261
+ P+ ++ A++ +C
Sbjct: 162 GILPDKFAYSAIIQSC 177
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/387 (35%), Positives = 218/387 (56%), Gaps = 42/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD-TMIGTALVDMYLKCGCLPCAH 66
EP+ +T +S+ S A + R VHG ++ + +IG A++DMY K G + AH
Sbjct: 371 EPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAH 430
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH-EGFKPDPATWNSMISGFSQ 125
VF L +++++WNT+I+G NG + +A+E++ + K + TW
Sbjct: 431 KVFN-LIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTW--------- 480
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
S+L+A A + AL+ G HGH+I+ +L+ D +
Sbjct: 481 --------------------------VSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFV 514
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T LI +Y KCG+ A F Q + P WNA+IS +G +G E A+++F MQ E
Sbjct: 515 GTCLIDLYGKCGRLVDAMCLFYQVPRESSVP--WNAIISCHGIHGHGEKALKLFREMQDE 572
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+ +F+++LSAC H+G VD+ F +M ++G+KP +H+GCMVDLLGR+G L+
Sbjct: 573 GVKPDHVTFISLLSACSHSGLVDEGKWFFHLM-QEYGIKPSLKHYGCMVDLLGRAGFLEM 631
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + I+++P P S++ +LLGAC H N +LG+ + +L E++ EN +V+LSNIYA
Sbjct: 632 AYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYAN 691
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+WE V ++R + +R L K PG S+
Sbjct: 692 VGKWEGVDKVRSLARERGLKKTPGWSS 718
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 126/252 (50%), Gaps = 11/252 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC + N T++S+++A A + LQ G ++HG +K D +GT L+D+Y KCG
Sbjct: 467 MEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCG 526
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A +F ++ ++ WN +I+ ++G EKA++LF + EG KPD T+ S++
Sbjct: 527 RLVDAMCLFYQVPRESSV-PWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLL 585
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA 177
S S G+ E F MQ G+ PSLK C+ +L L + + +
Sbjct: 586 SACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFL------EMAYDFIKDM 639
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAV 236
L+ D S+ AL+ G + D+ FE+ ++ ++ + + Y G++E
Sbjct: 640 PLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVD 699
Query: 237 EIFDLMQQEKVK 248
++ L ++ +K
Sbjct: 700 KVRSLARERGLK 711
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 41/313 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF V+ AC +L+ GR++H K+ Q D + +L+ MY + G + A ++F ++
Sbjct: 177 TFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDM 233
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
F+ D +WN+MISG Q G +A
Sbjct: 234 P-----------------------------------FR-DMGSWNAMISGLIQNGNAAQA 257
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ ++M+ G+ V S+L CA L + H +VI+ L + ++ ALI+M
Sbjct: 258 LDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINM 317
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y K G A++ F Q ++ D WN++I+ Y +N + +A F MQ ++P+
Sbjct: 318 YAKFGNLGDAQKVFQQMFLR--DVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLL 375
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V++ S + + + + L ++D+ + G +D A ++
Sbjct: 376 TLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNL 435
Query: 313 LPEPTVSVYHSLL 325
+P V +++L+
Sbjct: 436 IPVKDVVSWNTLI 448
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 146/357 (40%), Gaps = 53/357 (14%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
+ F S+ +C L +++H L + K I LV++Y G + + F +
Sbjct: 77 IDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQ 133
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
++ + D TWNSMIS + + G E
Sbjct: 134 IQ------------------------------------RKDVYTWNSMISAYVRNGHFRE 157
Query: 132 AFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
A F + + T VL AC L G++ H V + D +A +LI
Sbjct: 158 AIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCWVFKLGFQWDVFVAASLI 214
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
MY + G AR FD + D WNAMISG +NG A+++ D M+ E + +
Sbjct: 215 HMYSRFGFVGIARSLFDDMPFR--DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMD 272
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
S + ++L C G + A I + GL+ + ++++ + G L +A+++
Sbjct: 273 SVTVASILPVCAQLGDISTATLIHLYVIKH-GLEFELFVSNALINMYAKFGNLGDAQKVF 331
Query: 311 RELPEPTVSVYHSLLGACWCHLNSD----LGEEMAMKLQEMEPENPTPFVILSNIYA 363
+++ V ++S++ A N D G M+L +EP+ T V L++I A
Sbjct: 332 QQMFLRDVVSWNSIIAA--YEQNDDPVTARGFFFKMQLNGLEPDLLT-LVSLASIAA 385
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/416 (33%), Positives = 224/416 (53%), Gaps = 39/416 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ- 70
VT S++SA A L+ G++V ++ SD ++ + V+MY KCG + A VF
Sbjct: 371 VTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNS 430
Query: 71 --------------------------------ELKG-SRNILTWNTMIAGMMLNGRSEKA 97
+L+G N++TWN++I ++ NG+ +A
Sbjct: 431 TVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEA 490
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
++F + G P+ +W +M++G Q G EA KMQ +G+ ++ +T LSA
Sbjct: 491 KDMFLQMQSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSA 550
Query: 158 CADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
CA+L++L G+ HG++IR + S+ T+L+ MY KCG S A R F ++ + P
Sbjct: 551 CANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGS-KLYSELP 609
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMIS Y G + A ++ + ++ ++P++ + VLSAC HAG +++A+ IFT
Sbjct: 610 -LYNAMISAYALYGNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFT 668
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNS 334
M +KP EH+G MVDLL +G ++A LI E+P +P + SLL +C S
Sbjct: 669 DMVSKHAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKS 728
Query: 335 DLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+L E ++ L E EPEN +V +SN+YA G W++VG++R+M+ + L K PG S
Sbjct: 729 ELVEYLSRHLLESEPENSGNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGCS 784
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 50/356 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +V AC +L + +FGR VHG K + ++L DMY KCG L A V
Sbjct: 166 PDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKV 225
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT--WNSMISGFSQL 126
F E+ PD WN+++ G+ Q
Sbjct: 226 FDEI--------------------------------------PDRTVVAWNALMVGYVQN 247
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
GM EA +L M++ G+ P+ V++ LSA A++ ++ GK++H I L D +
Sbjct: 248 GMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILG 307
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
T++++ Y K G +A FD+ K D WN +ISGY + G E A+ + LM++
Sbjct: 308 TSILNFYCKVGLIEYAEMIFDRMIEK--DVVTWNLLISGYVQQGLVEDAIHMCQLMRRGN 365
Query: 247 VKPNSASFVAVLSACG--HAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ + + +++SA H + K +Q + + G V++ + G +
Sbjct: 366 LNFDCVTLSSLMSAAARTHNLKLGKEVQCYCI---RHGFVSDIVLASTAVEMYAKCGSIV 422
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
+A+++ E + ++++LL A + L E EM+ E P VI N
Sbjct: 423 DAKKVFNSTVEKDLILWNTLLAA---YAEPGLSGEALRLFYEMQLEGVPPNVITWN 475
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 43/310 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+Q H + + + D ++GT++++ Y K G + A
Sbjct: 266 EPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEM 325
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + + D TWN +ISG+ Q G
Sbjct: 326 IFDRM------------------------------------IEKDVVTWNLLISGYVQQG 349
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ +A + + M+ + + CVT S++SA A LKLGKE + IR D +
Sbjct: 350 LVEDAIHMCQLMRRGNL--NFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVL 407
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A+ + MY KCG A++ F+ K D WN +++ Y G A+ +F MQ E
Sbjct: 408 ASTAVEMYAKCGSIVDAKKVFNSTVEK--DLILWNTLLAAYAEPGLSGEALRLFYEMQLE 465
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN ++ +V+ + G V++A +F M G+ P + M++ L ++G +E
Sbjct: 466 GVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSS-GISPNLISWTTMMNGLVQNGCSEE 524
Query: 306 ARELIRELPE 315
A +R++ E
Sbjct: 525 AIVYLRKMQE 534
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 47/289 (16%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + I T LV Y KC L A +F +L+
Sbjct: 71 ILQGCVYERDLSTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLR- 129
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+RN+ +W +I G + ++G+ A
Sbjct: 130 ARNVFSWAAII----------------------GVR-------------CRIGLVEGALM 154
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M G+ P V +V AC L + G+ HG+V +A L+ +A++L MY
Sbjct: 155 GFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYG 214
Query: 195 KCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR+ FD+ PD WNA++ GY +NG + A+ + M+ E ++P +
Sbjct: 215 KCGLLDDARKVFDEI---PDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVT 271
Query: 254 FVAVLSACGHAGHVDK-----ALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
LSA + G +++ A+ I ++ D L +F C V L+
Sbjct: 272 VSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLI 320
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 20/256 (7%)
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
E P ++ +S + G EA L +M S + + +L C L
Sbjct: 24 EAGNPPSISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLST 83
Query: 167 GKETHGHVIRAD--LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
G++ H +++ K+E + T L+ Y KC A+ F + ++ + W A+I
Sbjct: 84 GQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSK--LRARNVFSWAAIIG 141
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
R G E A+ F M + + P++ V ACG ALQ G
Sbjct: 142 VRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACG-------ALQWSRFGRGVHGYV 194
Query: 285 PKQEHFGC------MVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
K C + D+ G+ G LD+AR++ E+P+ TV +++L+ ++ + + +
Sbjct: 195 AKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVG---YVQNGMNQ 251
Query: 339 EMAMKLQEMEPENPTP 354
E L M E P
Sbjct: 252 EAIRLLSAMRNEGIEP 267
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 206/385 (53%), Gaps = 13/385 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N V + S+IS + R++ L + D ++ +V Y++ G + A
Sbjct: 186 ERNIVAWTSMISGYILCNRVALARRLFDLA----PERDVVLWNIMVSGYIEIGDMKAARK 241
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+ ++WNTM+ G NG E +LFE + + +WN +I G++ G
Sbjct: 242 LFDTMP-YRDTMSWNTMLNGYANNGDVEACEQLFEEMPER----NVFSWNGLIGGYAHNG 296
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
FE + F++M G+V P+ + +VLSACA L AL LGK H + +
Sbjct: 297 CFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVG 356
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG A F+ ++K D WN+MI G +G A+ +F M+
Sbjct: 357 NALIDMYSKCGLIENAMEVFESMDLK--DLITWNSMICGLATHGCGADALTLFHQMKING 414
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP+ +F+ VL +C H G V++ F M +++ + P+ EH+GCMVDL GR+G LD A
Sbjct: 415 EKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRA 474
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E ++ +P E ++ +LLGAC + N DL E KL +EP+NP +V+LSNIY L
Sbjct: 475 IEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDL 534
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV R++ ++ D KLPG S
Sbjct: 535 GRWKDVARLKILMRDTGSKKLPGCS 559
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 54/322 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF V+ +CA + G ++H +K + + + T L+D+Y + A+
Sbjct: 120 RPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYK 179
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + RNI+ W +MI+G +L R A LF+ LA E D WN M+SG+ ++G
Sbjct: 180 LFVGML-ERNIVAWTSMISGYILCNRVALARRLFD-LAPE---RDVVLWNIMVSGYIEIG 234
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A KLF+ M +D
Sbjct: 235 DMKAARKLFDTMPY---------------------------------------RDTMSWN 255
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+++ Y G + F++ P+ F WN +I GY NG + + F M +
Sbjct: 256 TMLNGYANNGDVEACEQLFEEM---PERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 312
Query: 247 -VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
V PN A+ V VLSAC G +D K + ++ G K ++D+ + G +
Sbjct: 313 LVVPNDATLVTVLSACARLGALDLGKWVHVYAA---TIGFKGSIYVGNALIDMYSKCGLI 369
Query: 304 DEARELIRELPEPTVSVYHSLL 325
+ A E+ + + ++S++
Sbjct: 370 ENAMEVFESMDLKDLITWNSMI 391
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 51/257 (19%)
Query: 111 PDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
PDP WN++ G+ E LF KM+S + P+ VL +CA + A G+
Sbjct: 84 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 143
Query: 169 ETHGHVIRADLNKDESMATAL-------------------------------ISMYMKCG 197
E H VI+ L ++ +AT L IS Y+ C
Sbjct: 144 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 203
Query: 198 QPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
+ + ARR FD + P+ D WN M+SGY G+ ++A ++FD M ++ S+
Sbjct: 204 RVALARRLFD---LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR----DTMSWNT 256
Query: 257 VLSACGHAGHVDKALQIFTMMDDD-----FGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+L+ + G V+ Q+F M + GL H GC ++L R+ LI
Sbjct: 257 MLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM-----LID 311
Query: 312 ELPEPTVSVYHSLLGAC 328
L P + ++L AC
Sbjct: 312 GLVVPNDATLVTVLSAC 328
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 215/368 (58%), Gaps = 11/368 (2%)
Query: 26 YLQFGR--QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNT 83
YLQ GR + + + +I + D++ +++ Y CG A +FQE+ +++++WNT
Sbjct: 336 YLQSGRMDEANEIFSQISVR-DSVCWNSMITGYAHCGRTDEALRLFQEMV-CKDMVSWNT 393
Query: 84 MIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTG 143
MIA G+ +KA+E+F +E + + +WNS+I+G+ Q G+ FEA F M+ G
Sbjct: 394 MIAAYAQAGQMDKALEMF----NEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQG 449
Query: 144 MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWAR 203
P + L A A+L+AL +G + H I+ D + A+++MY K G+ A
Sbjct: 450 EKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAE 509
Query: 204 RFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
F EIK D WN++I+GY NG + AVE+F++M + P+ +F +LSAC H
Sbjct: 510 NVFA--EIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNH 567
Query: 264 AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE-PTVSVYH 322
G VD+ L +F M + + +KP+ EH+ C+++LLGR GRL+EA E+++ + + ++
Sbjct: 568 GGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIWG 627
Query: 323 SLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQ 382
+LL AC H N +L + A +L +EP+N + +V+LSN++A GRW+ V R+R ++ + +
Sbjct: 628 ALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKENK 687
Query: 383 LTKLPGIS 390
K PG S
Sbjct: 688 AEKQPGCS 695
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ T + + A A+L L G Q+H LT+K +D + A++ MY K G +P A
Sbjct: 450 EKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAE 509
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
NVF E+K ++++++WN++IAG LNG ++A+ELFE + G PD T+ ++S +
Sbjct: 510 NVFAEIK-NKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACNHG 568
Query: 127 GMRFEAFKLFEKMQSTGMVP----SLKCVTSVLSACADL 161
G + LF+ M T + CV ++L L
Sbjct: 569 GFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRL 607
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G + A VF ++ RNI+T+N+MI+ NGR A ELF+ + +WN
Sbjct: 27 RSGRIEEAVAVFLQMT-ERNIVTYNSMISAYAKNGRIANARELFDLMPQRNL----VSWN 81
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
SMI+G+ + +A +LF++M + T +++ + L+ +E +
Sbjct: 82 SMIAGYLHNELVEDAARLFDRM----FKRDIYSWTLMITCYTRIGELEKARELFN--LLP 135
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
D +D ALI+ Y K A++ FD+ +K + WN+++SGY +NG+ + ++
Sbjct: 136 D-KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVK--NVVSWNSILSGYTKNGKMQLGLQ 192
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL 297
F+ M + N S+ ++ G +D A F + P + M+
Sbjct: 193 FFEAMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIP-----TPNVVSWVTMLSGF 243
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
GR+ EAR L E+P + +++++GA ++ + ++ EM ++ +
Sbjct: 244 AHYGRMTEARNLFNEMPTKNLVSWNAMIGA---YVRENQIDDAYKLFMEMPEKDSVSWTA 300
Query: 358 LSNIYAGLGR 367
+ N Y +G+
Sbjct: 301 MINGYVRVGK 310
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 143/310 (46%), Gaps = 47/310 (15%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ DT+ AL+ Y K A +F E+ +N+++WN++++G NG+ + ++ FE
Sbjct: 137 KQDTVCRNALIAGYAKKRLFREAKKLFDEML-VKNVVSWNSILSGYTKNGKMQLGLQFFE 195
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
+ + +WN M+ G+ +G A+ F+K+ + P++ ++LS A
Sbjct: 196 AMGER----NVVSWNLMVDGYVGVGDLDSAWMFFKKIPT----PNVVSWVTMLSGFA--- 244
Query: 163 ALKLGKETHGHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
G+ T + ++ K+ A+I Y++ Q A + F E+ D W A
Sbjct: 245 --HYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDDAYKLF--MEMPEKDSVSWTA 300
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD--- 278
MI+GY R G+ A EI +LM + N A+ A+++ +G +D+A +IF+ +
Sbjct: 301 MINGYVRVGKLLQAREILNLMPYK----NIAAQTAMINGYLQSGRMDEANEIFSQISVRD 356
Query: 279 ----------------DDFGLKPKQE-------HFGCMVDLLGRSGRLDEARELIRELPE 315
D L+ QE + M+ ++G++D+A E+ E+ E
Sbjct: 357 SVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAAYAQAGQMDKALEMFNEMQE 416
Query: 316 PTVSVYHSLL 325
V ++SL+
Sbjct: 417 RNVVSWNSLI 426
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 213/384 (55%), Gaps = 8/384 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN VT +SV+ ACA L FG +VH ++ + + D +L+ +Y KCG L A
Sbjct: 238 RPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARE 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ +++ +T+ ++++G M +G +KAM+LF + + P +TWN++ISG Q
Sbjct: 298 LFNEMS-NKDEVTYGSIVSGYMTHGFVDKAMDLFREMKN----PRLSTWNAVISGLVQNN 352
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+L ++MQ G P+ ++S+L + S LK GK H + IR + +AT
Sbjct: 353 CNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVAT 412
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++I Y K G A+ FDQ K W A+IS Y +G+ +A+ +F M
Sbjct: 413 SIIDAYAKLGFLRGAQWVFDQ--SKDRSLIVWTAIISAYSAHGDANAALRLFGDMLSNGT 470
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +F AVL+AC H+G V++A +IF M +G +P EH+ CMV +L R+G L EA
Sbjct: 471 QPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMVGVLSRAGMLSEAA 530
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E I ++P EP V+ +LL + +LG+ + L MEPEN +VI++N+Y+ G
Sbjct: 531 EFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTGNYVIMANLYSQAG 590
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RWE+ IR+ + L K+PG S
Sbjct: 591 RWEEAENIREKMKKIGLKKIPGTS 614
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 128/326 (39%), Gaps = 50/326 (15%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F +I C+ L+ +Q+H + D + + L+ Y K L AH VF ++
Sbjct: 37 FGRLIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKIL 96
Query: 74 GSRNILTWNTMIAGMMLNG---RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+NI +WN M+ G ++ + + KPD T
Sbjct: 97 -DKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFT--------------- 140
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+ CV LS S L KE V+R + D + ALI
Sbjct: 141 -----------------ITCVLKALSVLFPDSIL--AKEVQCFVLRHGFDSDIFVVNALI 181
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKVKP 249
+ Y +C + AR FD+ + D WN+MI+GY + G YE E++ ++ ++P
Sbjct: 182 TYYSRCDEYGIARILFDRMHDR--DIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRP 239
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE----HFGCMVDLLGRSGRLDE 305
N + V+VL AC + +F M F ++ K E ++ L + G LD
Sbjct: 240 NGVTVVSVLQACAQTNDL-----VFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDY 294
Query: 306 ARELIRELPEPTVSVYHSLLGACWCH 331
AREL E+ Y S++ H
Sbjct: 295 ARELFNEMSNKDEVTYGSIVSGYMTH 320
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 8/176 (4%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D +WNSMI+G+SQ G + +L+ KM STG+ P+ V SVL ACA + L G +
Sbjct: 204 DIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKV 263
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H +I + D S +LI +Y KCG +AR F+ E+ D + +++SGY +G
Sbjct: 264 HQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFN--EMSNKDEVTYGSIVSGYMTHG 321
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ A+++F +E P +++ AV+S + L++ M +FG +P
Sbjct: 322 FVDKAMDLF----REMKNPRLSTWNAVISGLVQNNCNEGILELVQEM-QEFGFRPN 372
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 211/383 (55%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ SV+ CA L L GRQVHG K + + ++ ++L MY+KCG L +
Sbjct: 182 PDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERL 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ + S+N++ WNT +I+G +Q G
Sbjct: 242 IRAMP-SQNVVAWNT-----------------------------------LIAGRAQNGY 265
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E + M+ G P SV+S+C++L+ L G++ H VI+A + S+ ++
Sbjct: 266 PEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISS 325
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LISMY +CG ++ + F E + D W++MI+ YG +G A+++F+ M+QEK++
Sbjct: 326 LISMYSRCGCLEYSLKVF--LECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLE 383
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N +F+++L AC H G +K ++ F +M + +G+KP+ EH+ CMVDLLGR G ++EA
Sbjct: 384 ANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEA 443
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P + V + +LL AC H +++ ++ ++ ++P +P P+V+LSNI+A R
Sbjct: 444 LIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKR 503
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV +R+ + DR+L K PGIS
Sbjct: 504 WDDVSDVRKAMRDRKLKKEPGIS 526
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 161/352 (45%), Gaps = 13/352 (3%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F ++ +C S L G+Q+H L + SD I L+++Y KCG L A +F +
Sbjct: 55 FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
+NI++ N +I G +G A ++F+ + + ATWN+M++G Q E
Sbjct: 115 -RKNIMSCNILINGYFRSGDWVTARKMFDEMPER----NVATWNAMVAGLIQFEFNEEGL 169
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
LF +M G +P + SVL CA L AL G++ HG+V + + + ++L MY
Sbjct: 170 GLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMY 229
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
MKCG R + + WN +I+G +NG E ++ +++M+ +P+ +
Sbjct: 230 MKCGSLGEGERLIRA--MPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKIT 287
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
FV+V+S+C + + QI + G ++ + R G L+ + ++ E
Sbjct: 288 FVSVISSCSELATLGQGQQIHAEVIKA-GASLIVSVISSLISMYSRCGCLEYSLKVFLEC 346
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA 363
V + S++ A H G E +ME E LS +YA
Sbjct: 347 ENGDVVCWSSMIAAYGFH---GRGVEAIDLFNQMEQEKLEANDVTFLSLLYA 395
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 8 EPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
E N VTF+S++ AC+ + + + +G+ ++E T +VD+ + G
Sbjct: 383 EANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHY------TCMVDLLGRYG 436
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDP 113
+ A + + + +++TW T+++ ++ ++E A + E E F+ DP
Sbjct: 437 SVEEAEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISE----EVFRLDP 485
>gi|87240913|gb|ABD32771.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 497
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 209/383 (54%), Gaps = 32/383 (8%)
Query: 8 EPNSVTFISVISACA---SLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLP 63
EPN +T I+++SACA S + FG +H K +D M+GTAL+DMY KCG L
Sbjct: 84 EPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLD 143
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VF ++ G RN+++WNTMI G M NG + A++LF+ L + +W +I GF
Sbjct: 144 YARLVFDQM-GVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNV----VSWTVVIGGF 198
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ EA + F +MQ G+VP V +++SACA+L AL LG H V++ + +
Sbjct: 199 VKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNV 258
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ +LI MY +CG AR+ FD + + WN++I G+ NG + A+ F
Sbjct: 259 KVLNSLIDMYARCGCIELARQVFDGMSQR--NLVSWNSIIVGFAVNGLADKALSFF---- 312
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
C HAG +D+ L+IF + D P+ EH+GC+VDL R+GRL
Sbjct: 313 ----------------PCSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRL 356
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA ++I+++P P V SLL AC + +L E++ E+ P + +V+ SNIY
Sbjct: 357 KEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIY 416
Query: 363 AGLGRWEDVGRIRQMINDRQLTK 385
A +G+W+ ++R+ + +R L K
Sbjct: 417 AAVGKWDGASKVRREMKERGLQK 439
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 40/258 (15%)
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA---D 160
L H+ +W S IS + +A F +M + P+ + ++LSACA
Sbjct: 43 LKHKPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPS 102
Query: 161 LSALKLGKETHGHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
+++ G H H + ++ M TALI MY KCG+ +AR FDQ ++ + W
Sbjct: 103 KTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVR--NLVSW 160
Query: 220 NAMISGYGRNGE-------------------------------YESAVEIFDLMQQEKVK 248
N MI GY +NG+ YE A+E F MQ V
Sbjct: 161 NTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVV 220
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ + +A++SAC + G + L + + M +F + + ++D+ R G ++ AR
Sbjct: 221 PDFVTVIAIISACANLGALGLGLWVHRLVMKKEF--RDNVKVLNSLIDMYARCGCIELAR 278
Query: 308 ELIRELPEPTVSVYHSLL 325
++ + + + ++S++
Sbjct: 279 QVFDGMSQRNLVSWNSII 296
>gi|302142563|emb|CBI19766.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 216/399 (54%), Gaps = 38/399 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT S ISACASL L+ G ++H + +KI D ++G +L+DMY K G L A
Sbjct: 7 EPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARR 66
Query: 68 VF----------------------------------QELKGSRNILTWNTMIAGMMLNGR 93
VF E N++TWN MI+G + NG
Sbjct: 67 VFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGD 126
Query: 94 SEKAMELFEGLAHEGF-KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT 152
++AM+LF + +G K D A+WNS+I+G+ Q G + +A +F +MQS + P+ +
Sbjct: 127 EDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTML 186
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIK 212
S+L ACA+L A K KE HG ++R +L + S+A LI Y K G +A+ F I
Sbjct: 187 SILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQG--IS 244
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
D WN++I+GY +G +SA+++FD M + VKP+ +F++++ A +G VDK Q
Sbjct: 245 SKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQ 304
Query: 273 IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCH 331
+F+ M +D+ + P EH M+DLLGRSG+L EA E I ++ EP ++ +LL A H
Sbjct: 305 VFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTASKIH 364
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWED 370
N L L E+EP N + + +YA G++ED
Sbjct: 365 GNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFED 403
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 125/235 (53%), Gaps = 6/235 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNSVT +S++ ACA+L+ + +++HG L+ S+ + L+D Y K G + A
Sbjct: 179 RPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQT 238
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+FQ + S++I++WN++IAG +L+G S+ A++LF+ + G KP T+ S+I FS G
Sbjct: 239 IFQGIS-SKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSG 297
Query: 128 MRFEAFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
M + ++F M+ ++P L+ ++++ + KLG E + + D +
Sbjct: 298 MVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLG--RSGKLG-EAIEFIEDMAIEPDSCIW 354
Query: 187 TALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
AL++ G A R + E++P + + ++ Y +G++E A + D
Sbjct: 355 AALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDAPDQHD 409
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 19/221 (8%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M G+ P+ VTS +SACA L ALK G E H ++ +D + +LI MY K G+
Sbjct: 1 MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGE 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
ARR FD I D WN+MI GY + G A ++F M + V PN ++ A++
Sbjct: 61 LEDARRVFDM--ILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMI 118
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP---- 314
S G D+A+ +F M+ D +K + ++ ++G ++A + R++
Sbjct: 119 SGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCI 178
Query: 315 EPTVSVYHSLLGAC-------------WCHLNSDLGEEMAM 342
P S+L AC C L +LG E+++
Sbjct: 179 RPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSV 219
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 201/384 (52%), Gaps = 39/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S TF +V+ A A L G+ +HG+ +++ D TALV +Y C + A +
Sbjct: 87 PDSSTFPAVLKATAQLCDTGVGKMIHGIVIQMGFICDVYTSTALVHLYCTCLSISDASQL 146
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ + + TWN++I+G++
Sbjct: 147 FDEMP------------------------------------ERNAVTWNALITGYTHNRK 170
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A F M + G PS + V VLSAC+ L A GK H + L + + TA
Sbjct: 171 FVKAIDAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTA 230
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG + F+ EI+ + WN +ISGY NG+ ++A++ F M E K
Sbjct: 231 LIDMYAKCGAVYEVEKVFE--EIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFK 288
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL AC H G V + F M FGL+P+ EH+GCMVDLLGR+G L+EA E
Sbjct: 289 PDEVTFLGVLCACCHQGLVTEGRWQFMSMKQQFGLQPRIEHYGCMVDLLGRAGLLEEALE 348
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI+ + EP ++ +LL AC H N+ LGE + +L E+EP N +V+LSNIY+ R
Sbjct: 349 LIQSMSIEPDPIIWRALLCACRVHGNTKLGEYIIKRLIELEPNNGENYVLLSNIYSRERR 408
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W +VG++R M++ R + K+PG S+
Sbjct: 409 WAEVGKLRGMMSLRGIRKVPGCSS 432
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 9/259 (3%)
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
NSMI + L + +F M ++P +VL A A L +GK HG VI+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV 236
D +TAL+ +Y C S A + FD E+ + WNA+I+GY N ++ A+
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFD--EMPERNAVTWNALITGYTHNRKFVKAI 175
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
+ F M + +P+ + V VLSAC H G ++ I + + L+ ++D+
Sbjct: 176 DAFRGMLADGAQPSERTVVVVLSACSHLGAFNQGKWIHEFIYHN-RLRLNVFVGTALIDM 234
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD--LGEEMAMKLQEMEPENPTP 354
+ G + E ++ E+ E V ++ L+ + D L M ++ +P+ T
Sbjct: 235 YAKCGAVYEVEKVFEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTF 294
Query: 355 F-VILSNIYAGL---GRWE 369
V+ + + GL GRW+
Sbjct: 295 LGVLCACCHQGLVTEGRWQ 313
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T + V+SAC+ L G+ +H + + +GTAL+DMY KCG +
Sbjct: 187 QPSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEK 246
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+E++ +N+ TWN +I+G +NG+ + A++ F + E FKPD T+ ++ G
Sbjct: 247 VFEEIR-EKNVYTWNVLISGYAMNGQGDAALQAFSRMLMENFKPDEVTFLGVLCACCHQG 305
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E F M Q G+ P ++
Sbjct: 306 LVTEGRWQFMSMKQQFGLQPRIE 328
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/382 (35%), Positives = 205/382 (53%), Gaps = 44/382 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI---GTALVDMYLKCGCLPCAHNVF 69
T+ SV +A A+ LQFGR VHG+ LK D M+ A+ D Y KCG L VF
Sbjct: 427 TYCSVFNAIAASKSLQFGRVVHGMVLKC--GLDLMVVSVNNAIADAYSKCGFLEDVRKVF 484
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+I++W T +++ +SQ +
Sbjct: 485 DRME-ERDIVSWTT-----------------------------------LVTAYSQSSLG 508
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA F M+ G P+ +SVL +CA L L+ G++ HG + +A L+ ++ + +AL
Sbjct: 509 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 568
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + A + FD+ I D W A+ISGY ++G E A+++F M+ +K
Sbjct: 569 IDMYAKCGSITEAGKVFDK--ISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKA 626
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N+ + + VL AC H G V++ L F M+D +G+ P+ EH+ C++DLLGR GRLD+A E
Sbjct: 627 NAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEF 686
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
IR++P EP V+ +LLG C H N +LGE A K+ + PE +V+LSN Y G +
Sbjct: 687 IRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSNTYIETGSY 746
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
ED +R ++ D+ + K PG S
Sbjct: 747 EDGLSLRNVMKDQGVKKEPGYS 768
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 151/358 (42%), Gaps = 63/358 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + ++I +C L L+ G+ VH + + + T+L++MY K G + ++ V
Sbjct: 219 PDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWV 278
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F N++T + + +WN+MISG + G+
Sbjct: 279 F-------NMMT-----------------------------EHNQVSWNAMISGCTSNGL 302
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF LF +M++ P++ + SV A L + +GKE + + + TA
Sbjct: 303 HLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTA 362
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG AR FD I WNAMISGY ++G + A+E++ M Q +
Sbjct: 363 LIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGIT 422
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLL----------- 297
+ ++ +V +A K+LQ FG C +DL+
Sbjct: 423 SDLYTYCSVFNAIA----ASKSLQ--------FGRVVHGMVLKCGLDLMVVSVNNAIADA 470
Query: 298 -GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G L++ R++ + E + + +L+ A + S LGEE M E P
Sbjct: 471 YSKCGFLEDVRKVFDRMEERDIVSWTTLVTA---YSQSSLGEEALATFCLMREEGFAP 525
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 12/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF SV+ +CASL +L++GRQVHGL K ++ I +AL+DMY KCG + A V
Sbjct: 525 PNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKV 584
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + +I++W +I+G +G E A++LF + G K + T ++ S GM
Sbjct: 585 FDKIS-NPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGM 643
Query: 129 RFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F++M+ G+VP ++ ++ + L E + + + +E +
Sbjct: 644 VEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAME---FIRKMPMEPNEMVWQ 700
Query: 188 ALISMYMKCGQPSW----ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L+ G AR+ I+P+ A + + + Y G YE + + ++M+
Sbjct: 701 TLLGGCRVHGNVELGEIAARKILS---IRPEYSATYVLLSNTYIETGSYEDGLSLRNVMK 757
Query: 244 QEKVK 248
+ VK
Sbjct: 758 DQGVK 762
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 127/298 (42%), Gaps = 41/298 (13%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
I V+ CA ++ + VHGL LK E + ++ +Y KC A VF E
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ RN+ +W M I G ++ G+ F+
Sbjct: 181 MP-QRNVFSWTVM-----------------------------------IVGSTEHGLFFD 204
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
FK F +M ++G++P ++++ +C L +L+LGK H ++ ++T+L++
Sbjct: 205 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 264
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY K G + F+ + + WNAMISG NG + A ++F M+ PN
Sbjct: 265 MYAKLGSIEDSYWVFNM--MTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNM 322
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ V+V A G V+ ++ + G++ ++D+ + G L +AR +
Sbjct: 323 YTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNVLVGTALIDMYSKCGSLHDARSV 379
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 10/136 (7%)
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA-- 186
R E+ + E Q T ++ + VL CA+ +++ K HG V++++ + M
Sbjct: 103 RPESIGISETYQQT----QVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLF 158
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQE 245
+Y KC + A FD+ P F W MI G +G + + F M
Sbjct: 159 NHAAHVYSKCSEFRAACGVFDEM---PQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNS 215
Query: 246 KVKPNSASFVAVLSAC 261
+ P+ ++ A++ +C
Sbjct: 216 GILPDKFAYSAIIQSC 231
>gi|7488184|pir||E71401 probable selenium-binding protein - Arabidopsis thaliana
Length = 1070
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/387 (33%), Positives = 214/387 (55%), Gaps = 24/387 (6%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ F +++ ACA+L + GRQVH + E +D ++ ++LVDMY KCG L A
Sbjct: 39 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 98
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ +N ++W M++G +GR E+A+ELF L + +W ++ISGF Q G
Sbjct: 99 VFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSG 153
Query: 128 MRFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EAF +F +M+ + + ++S++ ACA+L+A G++ HG+
Sbjct: 154 KGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGN------------- 200
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KC A+ F + ++ D W ++I G ++G+ E A+ ++D M
Sbjct: 201 -ALIDMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHG 257
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +FV ++ AC H G V+K ++F M D+G++P +H+ C++DLLGRSG LDEA
Sbjct: 258 VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEA 317
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPFVILSNIYAG 364
LI +P P + +LL AC +G +A L + ++P+ +++LSNIYA
Sbjct: 318 ENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYAS 377
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
W V R+ + + ++ K PG S+
Sbjct: 378 ASLWGKVSEARRKLGEMEVRKDPGHSS 404
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 90/167 (53%), Gaps = 7/167 (4%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKET 170
D W S+++ +Q + + +F + S+ + P ++++ ACA+L ++ G++
Sbjct: 5 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 64
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H H I ++ DE + ++L+ MY KCG + A+ FD +K + W AM+SGY ++G
Sbjct: 65 HCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVK--NTISWTAMVSGYAKSG 122
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
E A+E+F ++ + N S+ A++S +G +A +FT M
Sbjct: 123 RKEEALELFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEM 165
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 214/386 (55%), Gaps = 41/386 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+++T SV+ CA + + G+ +H +K + + + AL++MY K G L A VF
Sbjct: 94 DAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF 153
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
G+++ D +WN++I+G++Q G+
Sbjct: 154 -----------------GLLIK--------------------DVVSWNTLITGYAQNGLA 176
Query: 130 FEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +++ M+ ++P+ S+L A + + AL+ G HG VI+ L D + T
Sbjct: 177 SEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTC 236
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG+ A F Q K P WNAMIS YG +G+ E A+E+F M+ E+VK
Sbjct: 237 LIDMYGKCGKLDDAISLFYQVPRKNSVP--WNAMISCYGVHGDGEKALELFREMKAERVK 294
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV++LSAC H+G V A F MM++++G+KP +H+GCMVDL GR+G L+ A
Sbjct: 295 PDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFN 354
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I+++P +P S + +LL AC H N +LG+ + +L E++ EN +V+LSNIYA +G+
Sbjct: 355 FIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGK 414
Query: 368 WEDVGRIRQMINDRQLTKLPGISAGI 393
WE V +R + DR L K PG S+ I
Sbjct: 415 WEGVDDVRSLARDRGLRKNPGWSSII 440
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 166/346 (47%), Gaps = 46/346 (13%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
V+ AC LL G+++H L LK+ + D + +LV MY + G + A +F ++
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPAR- 58
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
D +WN+MISG+ Q G EA +
Sbjct: 59 -----------------------------------DRGSWNAMISGYCQNGNAAEALDIA 83
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
++M+ G+ V SVL CA + + GK H +VI+ L + ++ ALI+MY K
Sbjct: 84 DEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKF 143
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFV 255
G A++ F IK D WN +I+GY +NG A+E++ LM++ E++ PN ++V
Sbjct: 144 GSLGHAQKVFGLL-IK--DVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWV 200
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
++L A H G + + ++I + + L C++D+ G+ G+LD+A L ++P
Sbjct: 201 SILPAYSHVGALQQGMRIHGQVIKNC-LYSDVFVGTCLIDMYGKCGKLDDAISLFYQVPR 259
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEMEPENPTPFVILS 359
+++++ H + + E+ MK + ++P++ T +LS
Sbjct: 260 KNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLS 305
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 40/351 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T++S++ A + + LQ G ++HG +K SD +GT L+DMY KCG L A ++
Sbjct: 194 PNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISL 253
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ +N + WN MI+ ++G EKA+ELF + E KPD T+ S++S S G+
Sbjct: 254 FYQVP-RKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGL 312
Query: 129 RFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+A F M+ G+ PSLK C+ + +L + + + D S
Sbjct: 313 VSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEM------AFNFIKKMPIQPDAS 366
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
AL++ G + ++ FE+ ++ ++ + + Y G++E ++ L +
Sbjct: 367 AWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLAR 426
Query: 244 QEKVKPNSASFVAVLS------ACGHAGH-----VDKALQIFTMMDDDFGLKP------- 285
++ N +L+ G+ H + + L+ T G P
Sbjct: 427 DRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQ 486
Query: 286 -----KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++EH L+G S RL A +I P+ + ++ +L CH
Sbjct: 487 DVEEDEKEHI-----LMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCH 532
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/385 (34%), Positives = 211/385 (54%), Gaps = 9/385 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T SV+SACA+L L G Q+H + ++ AL+ MY +CG + A +
Sbjct: 277 PDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336
Query: 69 FQELKGSRN--ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
++ +G+++ I + ++ G + G +A +F+ L D W +MI G+ Q
Sbjct: 337 IEQ-RGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR----DVVAWTAMIVGYEQH 391
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ EA LF M P+ + ++LS + L++L GK+ HG +++ S++
Sbjct: 392 GLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVS 451
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI+MY K G + A R FD + D + W +MI ++G E A+E+F+ M E
Sbjct: 452 NALITMYAKAGSITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P+ ++V V SAC HAG V++ Q F MM D + P H+ CMVDL GR+G L EA
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+E I ++P EP V + SLL AC + N DLG+ A +L +EPEN + L+N+Y+
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE+ +IR+ + D ++ K G S
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 174/397 (43%), Gaps = 22/397 (5%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQ--------VHGLTLKIEKQSDTMIGTALVDMYLK 58
D P ++ +++ C +LL + VH +K + L+++Y K
Sbjct: 2 DAPVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSK 61
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
G A +F E+ R +WNT+++ G + + E F+ L D +W +
Sbjct: 62 TGYALHARKLFDEMP-LRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQR----DSVSWTT 116
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI G+ +G +A ++ +M G+ PS +T+VL++ A L+ GK+ H +++
Sbjct: 117 MIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLG 176
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L + S++ +L++MY KCG P A+ FD+ +K D + WNAMI+ + + G+ + A+
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVK--DISSWNAMIALHMQVGQMDLAMAQ 234
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F+ M + + ++ +++S G+ +AL +F+ M D L P + ++
Sbjct: 235 FEQMAERDI----VTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACA 290
Query: 299 RSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP---F 355
+L ++ + + +L A + G E A +L E F
Sbjct: 291 NLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
L + Y LG + I + DR + + G
Sbjct: 351 TALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVG 387
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/382 (36%), Positives = 202/382 (52%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+++ F S ISACA + L G+Q+H D +G ALV +Y +CG + A+ F
Sbjct: 573 DNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAF 632
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ F D +WNS+ISGF+Q G
Sbjct: 633 DKI------------------------------------FSKDNISWNSLISGFAQSGHC 656
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +M G + +SA A+++ +KLGK+ H +I+ + + ++ L
Sbjct: 657 EEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVL 716
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I++Y KCG A R F FE+ + WNAM++GY ++G A+ +F+ M+Q V P
Sbjct: 717 ITLYAKCGNIDDAERQF--FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLP 774
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FV VLSAC H G VD+ ++ F M + GL PK EH+ C+VDLLGRSG L AR
Sbjct: 775 NHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRF 834
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+ E+P +P V +LL AC H N D+GE A L E+EP++ +V+LSN+YA G+W
Sbjct: 835 VEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKW 894
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
R RQM+ DR + K PG S
Sbjct: 895 GCRDRTRQMMKDRGVKKEPGRS 916
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 147/319 (46%), Gaps = 39/319 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P F SV+SAC + + + G Q+HGL LK +T + ALV +Y + G A V
Sbjct: 269 PTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQV 328
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F N M+ + D ++NS+ISG SQ G
Sbjct: 329 F------------NAML------------------------QRDEVSYNSLISGLSQQGY 352
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +LF+KM + P V S+LSAC+ + AL +GK+ H + I+A ++ D + A
Sbjct: 353 SDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGA 412
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KC A FF + ++ WN M+ YG + +IF MQ E ++
Sbjct: 413 LLDLYVKCSDIKTAHEFF--LSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ ++L C VD QI T + G + ++D+ + G+LD A +
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT-GFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 309 LIRELPEPTVSVYHSLLGA 327
+ R L E V + +++
Sbjct: 530 IFRRLKEKDVVSWTAMIAG 548
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 39/318 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN T+ S++ C+SL + G Q+H LK Q + + + L+DMY K G L A
Sbjct: 470 EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ LK + D +W +MI+G++Q
Sbjct: 530 IFRRLK------------------------------------EKDVVSWTAMIAGYAQHE 553
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF++MQ G+ S +SACA + AL G++ H + + D S+
Sbjct: 554 KFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN 613
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+S+Y +CG+ A FD+ I D WN++ISG+ ++G E A+ +F M +
Sbjct: 614 ALVSLYARCGKVRDAYFAFDK--IFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQ 671
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ NS +F +SA + +V QI M+ G + E ++ L + G +D+A
Sbjct: 672 EINSFTFGPAVSAAANVANVKLGKQIHAMIIKT-GHDSETEVSNVLITLYAKCGNIDDAE 730
Query: 308 ELIRELPEPTVSVYHSLL 325
E+PE ++++L
Sbjct: 731 RQFFEMPEKNEISWNAML 748
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 51/309 (16%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+CL +P+ VT S++SAC+S+ L G+Q H +K SD ++ AL+D+Y+KC +
Sbjct: 366 DCL--KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDI 423
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
AH F + + N++ WN M+ L ++ ++F + EG +P+ T+
Sbjct: 424 KTAHEFFLSTE-TENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTY------ 476
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
S+L C+ L A+ LG++ H V++ +
Sbjct: 477 -----------------------------PSILRTCSSLRAVDLGEQIHTQVLKTGFQFN 507
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+++ LI MY K G+ A + F + +K D W AMI+GY ++ ++ A+ +F M
Sbjct: 508 VYVSSVLIDMYAKLGKLDHALKIFRR--LKEKDVVSWTAMIAGYAQHEKFAEALNLFKEM 565
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM-----MDDDFGLKPKQEHFGCMVDLL 297
Q + + ++ F + +SAC +++ QI DD + +V L
Sbjct: 566 QDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVG------NALVSLY 619
Query: 298 GRSGRLDEA 306
R G++ +A
Sbjct: 620 ARCGKVRDA 628
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 41/351 (11%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
++ N +I NG A ++F+GL K D +W +M+SG SQ G EA LF
Sbjct: 204 SLFVCNPLIDLYFKNGFLNSAKKVFDGLQ----KRDSVSWVAMLSGLSQSGCEEEAVLLF 259
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M ++G+ P+ +SVLSAC + K+G++ HG V++ + + + AL+++Y +
Sbjct: 260 CQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRL 319
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A + F+ + D +N++ISG + G + A+E+F M + +KP+ + +
Sbjct: 320 GNFIPAEQVFN--AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVAS 377
Query: 257 VLSACGHAG----------HVDKA------------LQIFTMMDD-----DFGLKPKQEH 289
+LSAC G + KA L ++ D +F L + E+
Sbjct: 378 LLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETEN 437
Query: 290 FGCMVDLLGRSGRLDEARELIR-------ELPEPTVSVYHSLLGACWCHLNSDLGEEMAM 342
+L G LD E + E EP Y S+L C DLGE++
Sbjct: 438 VVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHT 497
Query: 343 KLQEMEPE-NPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISAG 392
++ + + N +L ++YA LG+ + +I + + ++ + + AG
Sbjct: 498 QVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 146/358 (40%), Gaps = 52/358 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T++ ++ C S + G ++HG LK+ ++ ++ L+D+Y+ G L A VF
Sbjct: 67 NSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVF 126
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ R + WN ++ + + + + LF + E KPD T+ ++ G
Sbjct: 127 DEMP-VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGC------ 179
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
G VP CV + H I + L
Sbjct: 180 -----------GGGDVP-FHCVEKI----------------HARTITHGYENSLFVCNPL 211
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I +Y K G + A++ FD + + D W AM+SG ++G E AV +F M V P
Sbjct: 212 IDLYFKNGFLNSAKKVFDGLQKR--DSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYP 269
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ----EHFGC--MVDLLGRSGRL 303
F +VLSAC ++ + + + GL KQ E + C +V L R G
Sbjct: 270 TPYIFSSVLSAC-------TKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNF 322
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK--LQEMEPENPTPFVILS 359
A ++ + + Y+SL+ SD E+ K L ++P+ T +LS
Sbjct: 323 IPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLS 380
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E NS TF +SA A++ ++ G+Q+H + +K S+T + L+ +Y KCG + A
Sbjct: 672 EINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAER 731
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ +N ++WN M+ G +G KA+ LFE + G P+ T+ ++S S +G
Sbjct: 732 QFFEMP-EKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVG 790
Query: 128 MRFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADLS 162
+ E K F+ M+ G+VP CV +L LS
Sbjct: 791 LVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLS 829
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M+ G+ + + +L C G + HG +++ + + L+ +Y+ G
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
A FD+ ++P + WN ++ + + +F M QEKVKP+ ++ VL
Sbjct: 119 LDGAVTVFDEMPVRP--LSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVL 176
Query: 259 SACGHAG---HVDKALQIFTMMDDDFGLKPKQEHFGC--MVDLLGRSGRLDEARELIREL 313
CG H + + T+ + F C ++DL ++G L+ A+++ L
Sbjct: 177 RGCGGGDVPFHCVEKIHARTITHG-----YENSLFVCNPLIDLYFKNGFLNSAKKVFDGL 231
Query: 314 PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA 363
+ + ++L S EE + +M PTP++ S + A
Sbjct: 232 QKRDSVSWVAMLSGL---SQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSA 280
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 207/382 (54%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N++ SV+ A L L+ G+++H LK SD ++G+AL+ MY CG + A ++F
Sbjct: 333 NAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIF 392
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ S+K D WNSMI G++ +G
Sbjct: 393 E---------------------CTSDK---------------DIMVWNSMIVGYNLVGDF 416
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
AF F ++ P+ V S+L C + AL+ GKE HG+V ++ L + S+ +L
Sbjct: 417 ESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSL 476
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG + F Q ++ + +N MIS G +G+ E + ++ M++E +P
Sbjct: 477 IDMYSKCGFLELGEKVFKQMMVR--NVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRP 534
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +F+++LSAC HAG +D+ ++ M +D+G++P EH+ CMVDL+GR+G LD A +
Sbjct: 535 NKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKF 594
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P P +V+ SLLGAC H +L E +A ++ +++ ++ +V+LSN+YA RW
Sbjct: 595 ITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRW 654
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
ED+ ++R MI D+ L K PG S
Sbjct: 655 EDMSKVRSMIKDKGLEKKPGSS 676
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 142/317 (44%), Gaps = 40/317 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ V+ AC+SL LQ GR VH T+ + +++ + A++DM+ KCG + A +
Sbjct: 131 PDNYTYPLVLKACSSLHALQLGRWVHE-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E+ D A+W ++I G G
Sbjct: 190 FEEMPDR------------------------------------DLASWTALICGTMWNGE 213
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF KM+S G++P V S+L AC L A+KLG +R+ D ++ A
Sbjct: 214 CLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNA 273
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY KCG P A R F + D W+ +I+GY +N Y+ + +++ M +
Sbjct: 274 VIDMYCKCGDPLEAHRVFSH--MVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLA 331
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N+ +VL A G + + ++ + + GL ++ + G + EA
Sbjct: 332 TNAIVATSVLPALGKLELLKQGKEMHNFVLKE-GLMSDVVVGSALIVMYANCGSIKEAES 390
Query: 309 LIRELPEPTVSVYHSLL 325
+ + + V++S++
Sbjct: 391 IFECTSDKDIMVWNSMI 407
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 124/270 (45%), Gaps = 12/270 (4%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN +T +S++ C + L+ G+++HG K + +G +L+DMY KCG L
Sbjct: 432 RPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEK 491
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+++ RN+ T+NTMI+ +G+ EK + +E + EG +P+ T+ S++S S G
Sbjct: 492 VFKQMM-VRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAG 550
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + L+ M G+ P+++ C+ ++ DL + + R + D
Sbjct: 551 LLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDG------AYKFITRMPMTPDA 604
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ +L+ + ++ ++K DD + + + Y +E ++ ++
Sbjct: 605 NVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMI 664
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQ 272
+ + ++ S + C + H A
Sbjct: 665 KDKGLEKKPGSSWIQVGHCIYVFHATSAFH 694
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 16/291 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G + A F L H KP A WN+++ G +G +A + M G+ P
Sbjct: 81 GSLQHAFLTFRALPH---KPIIA-WNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTY 136
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
VL AC+ L AL+LG+ H + + + A+I M+ KCG ARR F++
Sbjct: 137 PLVLKACSSLHALQLGRWVH-ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEM-- 193
Query: 212 KPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGH--AGHVD 268
PD D A W A+I G NGE A+ +F M+ E + P+S ++L ACG A +
Sbjct: 194 -PDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLG 252
Query: 269 KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
ALQ+ + G + ++D+ + G EA + + V + +L+
Sbjct: 253 MALQVCAVRS---GFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAG- 308
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
N E + + + T ++ +++ LG+ E + + ++M N
Sbjct: 309 -YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHN 358
>gi|357520897|ref|XP_003630737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524759|gb|AET05213.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 447
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 200/385 (51%), Gaps = 41/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T V+ A + +Q G+QVH +K+ QS+ + +++Y K G AH V
Sbjct: 95 PDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKV 154
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E HE P +WN++ISG SQ G+
Sbjct: 155 FDE---------------------------------NHE---PKLGSWNALISGLSQGGL 178
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES--MA 186
+A +F M+ G P + SV+SAC + L L + H +V +A N+ M+
Sbjct: 179 AMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMS 238
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG+ A F E + + + W +MI GY +G + A+ F M++
Sbjct: 239 NSLIDMYGKCGRMDLAYEVFATMEDR--NVSSWTSMIVGYAMHGHAKEALGCFHCMRESG 296
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +F+ VLSAC H G V + F MM + +G+ P+ +H+GCMVDLLGR+G D+A
Sbjct: 297 VKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDA 356
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
R ++ E+P +P V+ L+GAC H N D+ E +A LQ +EP N +V+LSNIYA
Sbjct: 357 RRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANK 416
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W++V RIR + + +L K+P S
Sbjct: 417 GLWKEVERIRSFMKEGRLAKIPAYS 441
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 23/291 (7%)
Query: 83 TMIAGMMLNGRSEKAMELFEGLAH----EGFKPDPAT--WNSMISGFSQLGMRFEAFKLF 136
T+IA ++ N + + +L + AH + +PA+ WN++I +++L A +++
Sbjct: 28 TVIATLLSN--TTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIY 85
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M G++P + VL A + A++LG++ H + I+ L +E + I++Y K
Sbjct: 86 VSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKA 145
Query: 197 GQPSWARRFFDQFEIKPDDPAF--WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
G A + FD+ +P WNA+ISG + G A+ +F M++ +P+ +
Sbjct: 146 GDFDSAHKVFDE----NHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITM 201
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELI 310
V+V+SACG G + ALQ+ + F K + ++D+ G+ GR+D A E+
Sbjct: 202 VSVMSACGSIGDLYLALQLHKYV---FQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVF 258
Query: 311 RELPEPTVSVYHSLL--GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
+ + VS + S++ A H LG M+ ++P T +LS
Sbjct: 259 ATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLS 309
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI--GTALVDMYLKCGCLPCA 65
EP+ +T +SV+SAC S+ L Q+H + + T+I +L+DMY KCG + A
Sbjct: 195 EPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLA 254
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VF ++ RN+ +W +MI G ++G +++A+ F + G KP+ T+ ++S
Sbjct: 255 YEVFATME-DRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVH 313
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK 149
G E F+ M++ G+ P L+
Sbjct: 314 GGTVQEGRFYFDMMKNIYGITPQLQ 338
>gi|224077718|ref|XP_002305377.1| predicted protein [Populus trichocarpa]
gi|222848341|gb|EEE85888.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 198/348 (56%), Gaps = 8/348 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + ++D Y+K G + A +F+ + RN+++W+TM++G G E A LF+ +
Sbjct: 42 DAVSWNTILDGYVKAGEMNKAFGLFESMP-ERNVVSWSTMVSGYCKAGDMEMARMLFDRM 100
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ +W ++SG++ G+ +A + FE+M+ G+ P V S+L++CA+ L
Sbjct: 101 PVKNL----VSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLL 156
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
LGK H + R +++ AL+ MY KCGQ A F+ K D WN M+
Sbjct: 157 GLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKK--DLVSWNCMLQ 214
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
G +G E A+++F +M+QE +P+ + VAVL AC HAG VD+ ++ F M+ D+G+
Sbjct: 215 GLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAGFVDEGIRYFNNMERDYGIV 274
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+GCMVDLLGR GRL EA L++ +P EP V ++ +LLGAC H L EE+
Sbjct: 275 PHIEHYGCMVDLLGRGGRLKEAYRLVQSMPVEPNVVIWGTLLGACRMHNAVGLAEEVLDC 334
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
L ++EP +P + +LSNI+A G W V +R + + + K G S+
Sbjct: 335 LFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQMKNFGIQKPSGASS 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 138/297 (46%), Gaps = 26/297 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T IS++++CA L G++VH +I + + ALVDMY KCG + A +
Sbjct: 137 KPDDGTVISILASCAESGLLGLGKRVHTSIERIRYKCSVNVSNALVDMYAKCGQVDRALS 196
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + +++++WN M+ G+ ++G EKA++LF + EGF+PD T +++ G
Sbjct: 197 VFNGMS-KKDLVSWNCMLQGLAMHGHGEKALQLFSIMRQEGFRPDKVTLVAVLCACVHAG 255
Query: 128 MRFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
E + F M+ G+VP ++ C+ +L L KE + V + +
Sbjct: 256 FVDEGIRYFNNMERDYGIVPHIEHYGCMVDLLGRGGRL------KEAYRLVQSMPVEPNV 309
Query: 184 SMATALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L+ A D F+++P DP ++ + + + G++ S + M
Sbjct: 310 VIWGTLLGACRMHNAVGLAEEVLDCLFKLEPSDPGNYSLLSNIFASAGDWSSVANVRLQM 369
Query: 243 QQEKV-KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
+ + KP+ AS + VD + FT+ D PK + M++ LG
Sbjct: 370 KNFGIQKPSGASSI----------EVDDEVHEFTVFDKS---HPKSDKIYQMINRLG 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 118/268 (44%), Gaps = 36/268 (13%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D +WNSMI G ++G EA KLF++M A+
Sbjct: 11 DVVSWNSMIRGLLKVGELSEACKLFDEMPMK-------------------DAVSWNTILD 51
Query: 172 GHVIRADLNKD----ESMA-------TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
G+V ++NK ESM + ++S Y K G AR FD+ +K + W
Sbjct: 52 GYVKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVK--NLVSWT 109
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
++SGY G + A+ F+ M++ +KP+ + +++L++C +G + ++ T + +
Sbjct: 110 IIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTVISILASCAESGLLGLGKRVHTSI-ER 168
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
K +VD+ + G++D A + + + + ++ +L H + + ++
Sbjct: 169 IRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEKALQL 228
Query: 341 --AMKLQEMEPENPTPFVIL-SNIYAGL 365
M+ + P+ T +L + ++AG
Sbjct: 229 FSIMRQEGFRPDKVTLVAVLCACVHAGF 256
>gi|326499323|dbj|BAK06152.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 206/383 (53%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S TF +V ACA L L+ G +H ++ + SD + TALV +Y KCG L A +F
Sbjct: 104 SSFTFTAVAKACADLSALRTGAAIHAHSILLGFGSDRFVLTALVVLYSKCGQLGVARKLF 163
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+++ WN +MISG+ Q G+
Sbjct: 164 DAIR-DRSVVAWN-----------------------------------AMISGYEQNGLA 187
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
++++MQ+ VP + LSACA AL LG+E V+ ++ + +AL
Sbjct: 188 ERGIGVYKEMQAAKAVPDSMTFVATLSACAQAGALDLGREVERRVVSERMDISVFLGSAL 247
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG ARR+FD + + + W +MI+GYG +G A+++F LM+ E P
Sbjct: 248 VNMYARCGVVDKARRWFDALQER--NVVTWTSMIAGYGMHGHGREAIKLFHLMRCEGPPP 305
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FVAVLSAC HAG V + F M +GL P+ EH+ MVD+ GR+G LDEA +
Sbjct: 306 NHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHYCSMVDMFGRAGLLDEAMQF 365
Query: 310 IRE-LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I + +P EP V+ ++LGAC H N +LG E+A +L +EPENP+ V+LSNIYA G+
Sbjct: 366 ISDYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLIALEPENPSYHVLLSNIYALSGK 425
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
V ++R + R+L K G S
Sbjct: 426 MHHVEKVRNTMIKRRLKKQIGFS 448
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALV 53
+ C PN VTF++V+SACA + GR +V+GL ++E ++V
Sbjct: 297 LMRCEGPPPNHVTFVAVLSACAHAGLVMEGRDAFACMKRVYGLVPRVEHY------CSMV 350
Query: 54 DMYLKCGCLPCAHNVFQE-LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
DM+ + G L A + + G W ++ ++ +E+ E L +P+
Sbjct: 351 DMFGRAGLLDEAMQFISDYMPGEPGPEVWTAVLGACKMHKNFNLGVEVAERLI--ALEPE 408
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+++ ++S L + EK+++T + LK
Sbjct: 409 NPSYHVLLSNIYALSGKMHH---VEKVRNTMIKRRLK 442
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/383 (32%), Positives = 200/383 (52%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF +VIS CA+L +++G Q+H L L + + + +++ MY KCG L + +
Sbjct: 316 PNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVI 375
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F HE + D +W+++I+G+ Q G
Sbjct: 376 F------------------------------------HEMTRRDIVSWSTIIAGYXQGGH 399
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EAF+L M+ G P+ + SVLSAC +++ L+ GK+ H +V+ L + +A
Sbjct: 400 VSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSA 459
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY KCG A R FD E DD W AMI+GY +G +++F+ + + ++
Sbjct: 460 LINMYCKCGSIEEASRIFDAAE--NDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+S +F+ VLSAC HAG VD F M + + P +EH+GCM+DLL R+GRL +A
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P V+ +LL AC H + + G A ++ ++EP + L+NIYA G+
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGK 637
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + IR+++ + + K PG S
Sbjct: 638 WREAADIRKLMKSKGVIKEPGWS 660
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 137/302 (45%), Gaps = 39/302 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E +S TF + ACA L +GR++H +K + + L MY KCG L
Sbjct: 214 EYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLT 273
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+++ R++++W T+I ++ G+ E A++ F + P+ T+ ++ISG
Sbjct: 274 LFEKMS-MRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISG----- 327
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
CA+L+ ++ G++ H ++ L S+
Sbjct: 328 ------------------------------CANLARIEWGEQLHALILHLGLAASLSVEN 357
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++++MY KCGQ + + F E+ D W+ +I+GY + G A E+ M+ E
Sbjct: 358 SIMTMYAKCGQLTSSSVIFH--EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGP 415
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KP + +VLSACG+ ++ Q+ + GL+ ++++ + G ++EA
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYV-LSIGLEHTAMVLSALINMYCKCGSIEEAS 474
Query: 308 EL 309
+
Sbjct: 475 RI 476
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 147/344 (42%), Gaps = 40/344 (11%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
AC + +G +HG +K + +G+AL+DMY K G + VF E+ RN++
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMP-MRNVV 183
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
+W +I G++ G +++A+ F + W S + ++++
Sbjct: 184 SWTAIITGLVRAGYNKEALVYFSEM-----------WRSRV--------EYDSYTF---- 220
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
L ACAD AL G+E H ++ + +A L +MY KCG+
Sbjct: 221 ------------AIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKL 268
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ F++ ++ D W +I+ + G+ E AV+ F M++ V PN +F AV+S
Sbjct: 269 EYGLTLFEKMSMR--DVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVIS 326
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C + ++ Q+ ++ GL ++ + + G+L + + E+ +
Sbjct: 327 GCANLARIEWGEQLHALI-LHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIV 385
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+ +++ + E+ + ME PT F + S + A
Sbjct: 386 SWSTIIAGYXQGGHVSEAFEL-LSWMRMEGPKPTEFALASVLSA 428
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 14/246 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P SV+SAC ++ L+ G+Q+H L I + M+ +AL++MY KCG + A
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASR 475
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + +I++W MI G +G S + ++LFE + G +PD T+ ++S S G
Sbjct: 476 IFDAAEND-DIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 128 MRFEAFKLFEKMQSTGMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRA-DLNKD 182
+ F F M + K C+ +L LS + H+I A ++D
Sbjct: 535 LVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAE-------HMIEAMPFHRD 587
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ + + L+ G RR ++ +++P+ + + Y G++ A +I L
Sbjct: 588 DVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHITLANIYASKGKWREAADIRKL 647
Query: 242 MQQEKV 247
M+ + V
Sbjct: 648 MKSKGV 653
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQ- 140
N + ++ G A +F+ ++ + D +W ++ISG+ EA LF+ M+
Sbjct: 53 NKQLKELVKTGHLGNARRMFDKMS----QKDEISWTTLISGYVNANDSSEALLLFKNMRV 108
Query: 141 STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPS 200
+G+ ++ AC S + G+ HG+ ++ L + +AL+ MY K G+
Sbjct: 109 ESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIF 168
Query: 201 WARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSA 260
RR F + ++ + W A+I+G R G + A+ F M + +V+ +S +F L A
Sbjct: 169 EGRRVFHEMPMR--NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKA 226
Query: 261 CGHAGHVDKALQI 273
C +G ++ +I
Sbjct: 227 CADSGALNYGREI 239
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 12/175 (6%)
Query: 156 SACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD 215
+ C DL L+ + I D + + +K G ARR FD+ K D
Sbjct: 22 TECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKTGHLGNARRMFDKMSQK--D 79
Query: 216 PAFWNAMISGYGRNGEYESAVEIFDLMQQE---KVKPNSASFVAVLS--ACGHAGHVDKA 270
W +ISGY + A+ +F M+ E ++ P F+ L+ ACG V+
Sbjct: 80 EISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDP----FILSLAHKACGLNSDVNYG 135
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ GL ++D+ ++G++ E R + E+P V + +++
Sbjct: 136 -ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAII 189
>gi|297804490|ref|XP_002870129.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
gi|297315965|gb|EFH46388.1| hypothetical protein ARALYDRAFT_329829 [Arabidopsis lyrata subsp.
lyrata]
Length = 853
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 194/342 (56%), Gaps = 24/342 (7%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A++ Y++CG L A + F+ R ++ W MI G M + E A +F+ +
Sbjct: 190 NAMISGYIECGDLEKAAHFFKAAPF-RGVVAWTAMITGYMKAKKVELAEAMFKDMT---V 245
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
K + TWN+MISG+ + + KLF M G+ P+ ++S L C++LSAL LG++
Sbjct: 246 KKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALCLGRQ 305
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H I MY KCG+ A + F+ +K D WNAMISGY ++
Sbjct: 306 IHQ-----------------IVMYCKCGELGDAWKLFEA--MKKKDVVAWNAMISGYAQH 346
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E A+ +F M+ K KP+ +FVAVL AC HAG VD + F M D+ ++P+ +H
Sbjct: 347 GNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAGLVDIGMTYFDSMVRDYRVEPRPDH 406
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+ CMVDLLGR+G+++EA +LIR +P P +V+ +LLGAC H N +L E A KL E++
Sbjct: 407 YTCMVDLLGRAGKVEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLELD 466
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
P N +V L+NIYA WEDV R+R+ + + + K+PG S
Sbjct: 467 PRNAAGYVQLANIYASKNLWEDVARVRKRMKESNVVKVPGYS 508
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS S + C+ L L GRQ+H + MY KCG L A
Sbjct: 281 RPNSSGLSSALLGCSELSALCLGRQIHQIV-----------------MYCKCGELGDAWK 323
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI-----SG 122
+F+ +K ++++ WN MI+G +G +EKA+ LF + KPD T+ +++ +G
Sbjct: 324 LFEAMK-KKDVVAWNAMISGYAQHGNAEKALCLFHEMRDSKTKPDWITFVAVLLACNHAG 382
Query: 123 FSQLGMRF 130
+GM +
Sbjct: 383 LVDIGMTY 390
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 50/198 (25%)
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF-EAFKLF 136
I N +IA + +G + A+ +F G+ + + +WNS++ G S+ R EA +LF
Sbjct: 61 IFPLNKIIATRVRSGDIDGALSVFHGMRAK----NTVSWNSLLVGISKDPSRMMEAHQLF 116
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+++ D ++S Y++
Sbjct: 117 DEIPEP---------------------------------------DTFSYNIMLSCYVRN 137
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A+ FF++ K D A WN MI+GY R GE E A +F M ++ N S+ A
Sbjct: 138 GNFEKAQSFFNRMPFK--DAASWNTMITGYARRGEMEKARVLFYSMMEK----NEVSWNA 191
Query: 257 VLSACGHAGHVDKALQIF 274
++S G ++KA F
Sbjct: 192 MISGYIECGDLEKAAHFF 209
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A + FD EI D +N M+S Y RNG +E A F+ M + ++AS+ +++
Sbjct: 112 AHQLFD--EIPEPDTFSYNIMLSCYVRNGNFEKAQSFFNRMPFK----DAASWNTMITGY 165
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVY 321
G ++KA +F M ++ + + M+ G L++A + P V +
Sbjct: 166 ARRGEMEKARVLFYSM-----MEKNEVSWNAMISGYIECGDLEKAAHFFKAAPFRGVVAW 220
Query: 322 HSLLGACWCHLNSDLGEEM 340
+++ +L E M
Sbjct: 221 TAMITGYMKAKKVELAEAM 239
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 215/384 (55%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T S++SAC+ + L+ G++VHGL ++ + D+ + +L+ +Y+ CG L AH +
Sbjct: 492 PDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVL 551
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ + +++WNTM+ G + NG E+A+ LF + G +P ++ M
Sbjct: 552 FDAME-DKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQP------------CEISM 598
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
SV AC+ L +L+LG+E HG+ ++ L + +A +
Sbjct: 599 -----------------------MSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACS 635
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY K G + + F+ +K A WNAM+ GYG +G + A+++F+ MQ+
Sbjct: 636 VIDMYAKNGSVMESFKVFNG--LKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHC 693
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC H+G V + L M FG+ P +H+ C++D+L R+G+LDEA +
Sbjct: 694 PDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALK 753
Query: 309 LIRE--LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ E EP V +++ LL +C H N ++GE++A KL EPE P +V+LSN+YAG G
Sbjct: 754 IATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSG 813
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++RQ + + L K G S
Sbjct: 814 KWDEVRKVRQRMKEMSLRKDAGCS 837
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 85/392 (21%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +V+ CA + G+ VHGL +K+ + ++ AL+DMY KCGC+ A +
Sbjct: 287 PDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVI 346
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG--FKPDPATW---------- 116
F+ L ++N+++WNTM+ G G K +L + G + D T
Sbjct: 347 FK-LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEE 405
Query: 117 --------------------------NSMISGFSQLGMRFEAFKLFEKMQS--------- 141
N+ ++ +++ G A ++F ++S
Sbjct: 406 SVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNAL 465
Query: 142 ----------------------TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL 179
+G++P L V S+LSAC+ + +LKLGKE HG +IR L
Sbjct: 466 IGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRL 525
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
+D + +L+S+Y+ CG+ S A FD E K WN M++GY +NG E A+ +F
Sbjct: 526 ERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKT--LVSWNTMVNGYLQNGFPERALSLF 583
Query: 240 DLMQQEKVKPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGC-M 293
M V+P S ++V AC G + +++D+ C +
Sbjct: 584 RQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDN-------AFIACSV 636
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+D+ ++G + E+ ++ L E +V+ +++++
Sbjct: 637 IDMYAKNGSVMESFKVFNGLKERSVASWNAMV 668
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 29/347 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P ++ +SV AC+ L L+ GR+ HG LK + + I +++DMY K G + +
Sbjct: 592 QPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFK 651
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF LK R++ +WN M+ G ++GR+++A++LFE + G PD T+ +++ + G
Sbjct: 652 VFNGLK-ERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSG 710
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLS-ALKLGKETHGHVIRADLNKD 182
+ E ++M++ GM P+LK CV +L L ALK+ E + +
Sbjct: 711 LVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGI-WN 769
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+++ I ++ G+ A+ F + P+ P + + + Y +G+++ ++ M
Sbjct: 770 FLLSSCRIHKNLEMGEKIAAKLFVSE----PEKPENYVLLSNLYAGSGKWDEVRKVRQRM 825
Query: 243 QQEKVKPNSA-----------SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFG 291
++ ++ ++ SFVA S+ + + G +P
Sbjct: 826 KEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSVQ 885
Query: 292 CMVD-------LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ L G S +L LIR T+ VY +L CH
Sbjct: 886 HDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCH 932
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 45/240 (18%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ TF V+ ACA + +Q G VHGL +K D + ALV Y G + A V
Sbjct: 182 PDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRV 241
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ + RN+++W NSMI FS G+
Sbjct: 242 FK-IMPERNLVSW-----------------------------------NSMIRVFSDNGL 265
Query: 129 RFEAF----KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
E F ++ EK P + + +VL CA + +GK HG ++ L+K+
Sbjct: 266 SEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVV 325
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ AL+ MY KCG + A+ F K + WN M+ G+ G+ + FDL++Q
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNK--NVVSWNTMVGGFSAAGDIH---KTFDLLRQ 380
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 51/310 (16%)
Query: 27 LQFGRQVHGLTLKIEKQS-DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMI 85
+Q GR++H L + + S D ++ T ++ MY CG + +VF L+
Sbjct: 97 IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALR------------ 144
Query: 86 AGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGM 144
K + WN++IS +S+ + ++F KM +G+
Sbjct: 145 ------------------------KKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
+P V+ ACA +S +++G HG V++ L +D ++ AL+S Y G S A R
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALR 240
Query: 205 FFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK----VKPNSASFVAVLS 259
F+I P+ + WN+MI + NG E + M ++ P+ A+ VL
Sbjct: 241 V---FKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLP 297
Query: 260 ACGHAGH--VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPT 317
C V K + M L + ++D+ + G +++A+ + +
Sbjct: 298 VCARDREIGVGKGVHGLAM---KLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKN 354
Query: 318 VSVYHSLLGA 327
V +++++G
Sbjct: 355 VVSWNTMVGG 364
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 110/231 (47%), Gaps = 13/231 (5%)
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR-ADLNKDESMATA 188
E F EK S + + + +L A ++LG++ H V A L+ D+ + T
Sbjct: 63 IEEFDREEKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARLSNDDVLCTR 122
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEKV 247
+I+MY CG P +R FD ++ + WNA+IS Y RN Y + +E+F ++ + +
Sbjct: 123 VITMYSMCGSPDDSRSVFDA--LRKKNLFQWNAVISSYSRNELYHNVLEMFVKMITESGL 180
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF--GCMVDLLGRSGRLDE 305
P++ +F V+ AC V L + ++ + ++ F +V G +G + +
Sbjct: 181 LPDNFTFPCVVKACAGVSEVQVGLAVHGLV---VKTRLVEDVFVSNALVSFYGTNGSVSD 237
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKL-QEMEPENPTPF 355
A + + +PE + ++S++ ++ L EE + L Q ME ++ F
Sbjct: 238 ALRVFKIMPERNLVSWNSMIRV---FSDNGLSEECFLLLGQMMEKDDEIAF 285
>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 630
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 140/386 (36%), Positives = 212/386 (54%), Gaps = 14/386 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN TF S++ +C++ + G+ +H LK D + T LVD+Y K G + A V
Sbjct: 126 PNEFTFSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKV 181
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + R++++ MI G E A LF+ + D +WN MI G+SQ G
Sbjct: 182 FDRMP-ERSLVSSTAMITCYAKQGNVEAARALFDRMCER----DIVSWNVMIDGYSQHGF 236
Query: 129 RFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A LF+K+ + G P V + LSAC+ + AL+ G+ H V + + + + T
Sbjct: 237 PSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCT 296
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EK 246
ALI MY KCG A F+ K D WNAMI+GY +G + A+ +FD MQ
Sbjct: 297 ALIDMYSKCGSLEEAVLVFNDTPRK--DIVAWNAMITGYAMHGYSQDALRLFDEMQGITG 354
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++P +F+ L AC HAG V++ +QIF M ++G+KPK EH+GC+V LLGR+G+L A
Sbjct: 355 LQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 414
Query: 307 RELIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+I+ + SV + S+LG+C H LG+E+A L N +V+LSNIYA +
Sbjct: 415 YEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNISNSGIYVLLSNIYALV 474
Query: 366 GRWEDVGRIRQMINDRQLTKLPGISA 391
G +E V ++R ++ ++ + K PGIS
Sbjct: 475 GDYEGVAKVRNLMKEKGIVKEPGIST 500
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 131/303 (43%), Gaps = 39/303 (12%)
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
+G+ ++ LF H+ PD + + I+ S G++ +AF L+ ++ S+ + P+
Sbjct: 75 HGKIRHSLALF----HQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSQINPNEFT 130
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFE 210
+S+L +C+ K GK H HV++ L D +AT L+ +Y K G A++ FD+
Sbjct: 131 FSSILKSCST----KSGKLIHTHVLKFGLGLDPYVATGLVDIYAKGGDVVSAQKVFDRMP 186
Query: 211 IKP-----------------------------DDPAFWNAMISGYGRNGEYESAVEIFD- 240
+ D WN MI GY ++G A+ +F
Sbjct: 187 ERSLVSSTAMITCYAKQGNVEAARALFDRMCERDIVSWNVMIDGYSQHGFPSDALMLFQK 246
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
L+ K KP+ + VA LSAC G ++ I ++ ++ + ++D+ +
Sbjct: 247 LLADGKPKPDEITVVAALSACSQIGALETGRWIHVFVNSS-RIRLNVKVCTALIDMYSKC 305
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
G L+EA + + P + +++++ H S + ++Q + PT +
Sbjct: 306 GSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGT 365
Query: 361 IYA 363
+ A
Sbjct: 366 LQA 368
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T ++ +SAC+ + L+ GR +H + + + TAL+DMY KCG L A
Sbjct: 254 KPDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVL 313
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL-AHEGFKPDPATWNSMISGFSQL 126
VF + ++I+ WN MI G ++G S+ A+ LF+ + G +P T+ + +
Sbjct: 314 VFNDTP-RKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHA 372
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADL 161
G+ E ++FE M Q G+ P ++ C+ S+L L
Sbjct: 373 GLVNEGIQIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL 411
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 223/451 (49%), Gaps = 71/451 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN F S SAC+ LL GRQ+HGL +K SD G +L DMY KCG L A
Sbjct: 298 QPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESART 357
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT------------ 115
VF ++ +++ WN +IAG ++++ F + H G P+ T
Sbjct: 358 VFYHIEKP-DLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPV 416
Query: 116 -----------------------WNSMISGFSQLGMRFEAFKLFEK-------------- 138
NS++S +S+ +A ++FE
Sbjct: 417 MLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLL 476
Query: 139 ------------------MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
M ++ + P +T+VL + +++ ++G + H ++++ LN
Sbjct: 477 TACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLN 536
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S++ ALI+MY KCG AR+ FD I D W+++I GY + G + A E+F
Sbjct: 537 LDISVSNALINMYTKCGSLECARKMFD--SIGNPDIISWSSLIVGYAQAGCGKEAFELFR 594
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ VKPN +FV +L+AC H G V++ L+++ M +D+ + P +EH CMVDLL R+
Sbjct: 595 TMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARA 654
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G LD A + I+++P P V V+ +LL AC H N ++G+ A + +++P N V+L
Sbjct: 655 GCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLC 714
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NI+A G W+D R+R + + K+PG S
Sbjct: 715 NIHASSGHWKDFARLRSSMRRMDVGKVPGQS 745
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 149/326 (45%), Gaps = 40/326 (12%)
Query: 2 KECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
++C S SVT+ +I+AC+SL L+ GR++H L Q D ++ ++ MY KCG
Sbjct: 89 QKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGS 148
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
L A N+F + +N+++W SMIS
Sbjct: 149 LKEARNMFDSMP-LKNVVSWT-----------------------------------SMIS 172
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+S+ G A L+ +M +G +P S++ +C+ L KL ++ H HV++++
Sbjct: 173 GYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGA 232
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG-EYESAVEIFD 240
D ALISMY K Q + A F + IK D W +MI+G+ + G E E+ +
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIK--DLISWGSMIAGFSQLGYELEALCHFRE 290
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
++ Q +PN F + SAC D QI + FGL + D+ +
Sbjct: 291 MLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLC-IKFGLGSDLFAGCSLCDMYAKC 349
Query: 301 GRLDEARELIRELPEPTVSVYHSLLG 326
G L+ AR + + +P + +++++
Sbjct: 350 GFLESARTVFYHIEKPDLVAWNAIIA 375
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 10/182 (5%)
Query: 108 GFKPDPAT----WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVT--SVLSACADL 161
F P P T + I + + EA K F+ Q P LK VT +++AC+ L
Sbjct: 53 AFSPCPLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSP-LKSVTYTHLINACSSL 111
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+L+ G++ H H++ + D + ++SMY KCG AR FD +K + W +
Sbjct: 112 RSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLK--NVVSWTS 169
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-MMDDD 280
MISGY R GE ++A+ ++ M + P+ +F +++ +C A Q+ ++ +
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 281 FG 282
FG
Sbjct: 230 FG 231
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIG------TALVDMYLK 58
L +PN +TF+ +++AC+ + G GL L Q D I + +VD+ +
Sbjct: 599 LGVKPNEITFVGILTACSHI-----GMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLAR 653
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
GCL A + +++ +++ W T++A ++G +E+ + A K DP+ +
Sbjct: 654 AGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGN----LEVGKRAAENVLKIDPSNSAA 709
Query: 119 MI 120
++
Sbjct: 710 VV 711
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/443 (32%), Positives = 225/443 (50%), Gaps = 71/443 (16%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
SV+ AC SL +QFG QVH L +K + +G+ L DMY KCG L A F+E+
Sbjct: 181 SVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMP-C 239
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHE---------------------------- 107
++ + W +MI G + NG +KA+ + + +
Sbjct: 240 KDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSL 299
Query: 108 -------GFKPDPATWNSMISGFSQLGMRFEAFKLF------------------------ 136
GF+ + N++ +S+ G A +F
Sbjct: 300 HATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQ 359
Query: 137 -EKMQST-------GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EK ST G+ P+ TS++ ACA+ + L+ G + HG V++ + +D +++
Sbjct: 360 IEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSST 419
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG + + FD+ E PD+ A WN ++ + ++G +A+E F+ M +K
Sbjct: 420 LVDMYGKCGLFDHSIQLFDEIE-NPDEIA-WNTLVGVFSQHGLGRNAIETFNGMIHRGLK 477
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN+ +FV +L C HAG V+ L F+ M+ +G+ PK+EH+ C++DLLGR+G+L EA +
Sbjct: 478 PNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAED 537
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I +P EP V + S LGAC H + + + A KL ++EPEN V+LSNIYA +
Sbjct: 538 FINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQ 597
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV +R+MI D + KLPG S
Sbjct: 598 WEDVQSLRKMIKDGNMNKLPGYS 620
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 5/158 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN TF S+I ACA+ L+ G Q+HG +K + D + + LVDMY KCG +
Sbjct: 376 EPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQ 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E++ I WNT++ +G A+E F G+ H G KP+ T+ +++ G S G
Sbjct: 436 LFDEIENPDEI-AWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAG 494
Query: 128 MRFEAFKLFEKMQST-GMVPS---LKCVTSVLSACADL 161
M + F M+ G+VP CV +L L
Sbjct: 495 MVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKL 532
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 38/252 (15%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T +I A L G+Q+H + ++ +T + +++Y KCG L +F
Sbjct: 74 DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ RN+++W ++I G N R ++A+ S F Q MR
Sbjct: 134 DKM-SQRNMVSWTSIITGFAHNSRFQEAL----------------------SSFCQ--MR 168
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E G + + ++SVL AC L A++ G + H V++ + + + L
Sbjct: 169 IE-----------GEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNL 217
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
MY KCG+ S A + F++ K D W +MI G+ +NG+++ A+ + M + V
Sbjct: 218 TDMYSKCGELSDACKAFEEMPCK--DAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFI 275
Query: 250 NSASFVAVLSAC 261
+ + LSAC
Sbjct: 276 DQHVLCSTLSAC 287
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 80/184 (43%), Gaps = 17/184 (9%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
K V ++ A L GK+ H +IR + ++ +++Y KCG+ + + FD+
Sbjct: 76 KTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDK 135
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD 268
+ + W ++I+G+ N ++ A+ F M+ E + +VL AC G +
Sbjct: 136 --MSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193
Query: 269 KALQIFTMMDDDFGLKPKQEHFGC-------MVDLLGRSGRLDEARELIRELPEPTVSVY 321
Q+ ++ + FGC + D+ + G L +A + E+P ++
Sbjct: 194 FGTQVHCLV--------VKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLW 245
Query: 322 HSLL 325
S++
Sbjct: 246 TSMI 249
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 206/385 (53%), Gaps = 13/385 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E N V + S+IS + R++ L + D ++ +V Y++ G + A
Sbjct: 228 ERNIVAWTSMISGYILCNRVALARRLFDLA----PERDVVLWNIMVSGYIEIGDMKAARK 283
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+ ++WNTM+ G NG E +LFE + + +WN +I G++ G
Sbjct: 284 LFDTMP-YRDTMSWNTMLNGYANNGDVEACEQLFEEMPER----NVFSWNGLIGGYAHNG 338
Query: 128 MRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
FE + F++M G+V P+ + +VLSACA L AL LGK H + +
Sbjct: 339 CFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVG 398
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG A F+ ++K D WN+MI G +G A+ +F M+
Sbjct: 399 NALIDMYSKCGLIENAMEVFESMDLK--DLITWNSMICGLATHGCGADALTLFHQMKING 456
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
KP+ +F+ VL +C H G V++ F M +++ + P+ EH+GCMVDL GR+G LD A
Sbjct: 457 EKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRA 516
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E ++ +P E ++ +LLGAC + N DL E KL +EP+NP +V+LSNIY L
Sbjct: 517 IEFVKRMPMEADAVIWAALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDL 576
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GRW+DV R++ ++ D KLPG S
Sbjct: 577 GRWKDVARLKILMRDTGSKKLPGCS 601
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 54/322 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF V+ +CA + G ++H +K + + + T L+D+Y + A+
Sbjct: 162 RPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYK 221
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + RNI+ W +MI+G +L R A LF+ LA E D WN M+SG+ ++G
Sbjct: 222 LFVGML-ERNIVAWTSMISGYILCNRVALARRLFD-LAPE---RDVVLWNIMVSGYIEIG 276
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A KLF+ M +D
Sbjct: 277 DMKAARKLFDTMPY---------------------------------------RDTMSWN 297
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEK 246
+++ Y G + F++ P+ F WN +I GY NG + + F M +
Sbjct: 298 TMLNGYANNGDVEACEQLFEEM---PERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 354
Query: 247 -VKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
V PN A+ V VLSAC G +D K + ++ G K ++D+ + G +
Sbjct: 355 LVVPNDATLVTVLSACARLGALDLGKWVHVYAA---TIGFKGSIYVGNALIDMYSKCGLI 411
Query: 304 DEARELIRELPEPTVSVYHSLL 325
+ A E+ + + ++S++
Sbjct: 412 ENAMEVFESMDLKDLITWNSMI 433
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 51/257 (19%)
Query: 111 PDPAT--WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGK 168
PDP WN++ G+ E LF KM+S + P+ VL +CA + A G+
Sbjct: 126 PDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGE 185
Query: 169 ETHGHVIRADLNKDESMATAL-------------------------------ISMYMKCG 197
E H VI+ L ++ +AT L IS Y+ C
Sbjct: 186 EIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCN 245
Query: 198 QPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
+ + ARR FD + P+ D WN M+SGY G+ ++A ++FD M ++ S+
Sbjct: 246 RVALARRLFD---LAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYR----DTMSWNT 298
Query: 257 VLSACGHAGHVDKALQIFTMMDDD-----FGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
+L+ + G V+ Q+F M + GL H GC ++L R+ LI
Sbjct: 299 MLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRM-----LID 353
Query: 312 ELPEPTVSVYHSLLGAC 328
L P + ++L AC
Sbjct: 354 GLVVPNDATLVTVLSAC 370
>gi|115446683|ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa Japonica Group]
Length = 596
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 213/380 (56%), Gaps = 15/380 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S SACA L + R++HG + + ++ A+VD Y K G + A VF ++
Sbjct: 172 TVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQM 231
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++W +MIAG + A+++F+ + + D W ++ISG Q G A
Sbjct: 232 T-IRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQ----DAIAWTALISGHEQNGEEEIA 286
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES---MATAL 189
+LFE+M G+VP+ + S L ACA + + GKE HG ++R + D + AL
Sbjct: 287 LELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNAL 346
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A FD+ + D WN+M++G+ NG+ + ++ +F+ M +++V+P
Sbjct: 347 IDMYSKCGDMVAAMAVFDR--MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQP 404
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+AVL+AC HAG V +I M D G++P+ EH+ +D LGR+ +L+EA E
Sbjct: 405 TYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEF 463
Query: 310 IRELPEP----TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
I+ L T + +LLGAC H N ++ EE+A L ++EPEN +V+LSNIY+
Sbjct: 464 IKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAA 523
Query: 366 GRWEDVGRIRQMINDRQLTK 385
G+W+D ++R ++ + L K
Sbjct: 524 GQWDDARQVRALMKGKGLRK 543
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD---TMIGTALVDMYLKCGCLPCA 65
P +S + ACA + + G++VHG L+ SD I AL+DMY KCG + A
Sbjct: 300 PTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAA 359
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R+I++WN+M+ G NG+ ++++ +FE + + +P T+ ++++ S
Sbjct: 360 MAVFDRML-ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSH 418
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLNKDES 184
G+ + ++ E MQ G+ P + + + A L+ E G + L S
Sbjct: 419 AGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGS 478
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L + ++ G A + F+++P++ + + + Y G+++ A ++ LM+
Sbjct: 479 WGALLGACHVH-GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK 537
Query: 244 QEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDF 281
+ ++ + A + H D +A +I+ M+D F
Sbjct: 538 GKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLF 580
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 61/298 (20%)
Query: 60 GCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
G LP A + + SRN++++NT+I+ + +GR +A+ +F LA +
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARD----------- 158
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
G Q + + F V S SACA L + +E HG V+ +
Sbjct: 159 --RGLGQQQVAIDRF----------------TVVSAASACAGLRDARHLRELHGAVVVSG 200
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIK-------------------------- 212
+ MA A++ Y K G+ AR FDQ I+
Sbjct: 201 MEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFD 260
Query: 213 ---PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
D W A+ISG+ +NGE E A+E+F+ M E V P + V+ L AC G V +
Sbjct: 261 MMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVAR 320
Query: 270 ALQIFT-MMDDDFGLKPKQEHF-GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ ++ G P ++D+ + G + A + + E + ++S++
Sbjct: 321 GKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMV 378
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 214/390 (54%), Gaps = 41/390 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
P+ +T +S+ S + L + R + G ++ E D +IG ALV+MY K G + CAH
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF +L + D +WN++++G++Q
Sbjct: 380 TVFDQLP------------------------------------RKDTISWNTLVTGYTQN 403
Query: 127 GMRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ EA + M+ +P+ S++ A + + AL+ G + H +I+ L D +
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT LI +Y KCG+ A F +EI D WNA+I+ G +G E A+++F M E
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLF--YEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+VK + +FV++LSAC H+G VD+ + F +M ++G+KP +H+GCMVDLLGR+G L++
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEK 581
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A EL+R +P +P S++ +LL AC + N++LG + +L E++ EN +V+LSNIYA
Sbjct: 582 AYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
+WE V ++R + DR L K PG S+ +
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 162/343 (47%), Gaps = 44/343 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+++T S++ CA + G +H LK SD + AL++MY K G L A VF
Sbjct: 221 DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVF 280
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ R++++WN++IA N A+ F+G+ G +PD T S+ S FSQ
Sbjct: 281 DQME-VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ---- 335
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
LS ++ + G VIR + L+KD + A
Sbjct: 336 -------------------------------LSDQRISRSILGFVIRREWLDKDVVIGNA 364
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKV 247
L++MY K G + A FDQ K D WN +++GY +NG A++ +++M++
Sbjct: 365 LVNMYAKLGYMNCAHTVFDQLPRK--DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDT 422
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++V+++ A H G + + ++I + + L C++DL G+ GRL++A
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAM 481
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
L E+P T +++++ + H GEE ++M E
Sbjct: 482 SLFYEIPRDTSVPWNAIIASLGIH---GRGEEALQLFKDMLAE 521
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 53/324 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF ++ AC SL+ G++VH K+ + D + +LV +Y + G L AH
Sbjct: 121 RPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHK 177
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +WN+MISGF Q G
Sbjct: 178 VFVDMP------------------------------------VKDVGSWNAMISGFCQNG 201
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + +M+ G+ V S+L CA + G H HV++ L+ D ++
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY K G+ A+ FDQ E++ D WN++I+ Y +N + +A+ F MQ +
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVR--DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 248 KPNSASFVAVLSACGHAG--HVDKALQIFTM----MDDDFGLKPKQEHFGCMVDLLGRSG 301
+P+ + V++ S + +++ F + +D D + +V++ + G
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG------NALVNMYAKLG 373
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
++ A + +LP +++L+
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLV 397
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 159/354 (44%), Gaps = 30/354 (8%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC PN T++S+I A + + LQ G ++H +K D + T L+D+Y KCG
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A ++F E+ ++ WN +IA + ++GR E+A++LF+ + E K D T+ S++
Sbjct: 476 RLEDAMSLFYEIPRDTSV-PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLL 534
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIR 176
S S G+ E K F+ MQ G+ PSLK C+ +L L ++ + V
Sbjct: 535 SACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYL------EKAYELVRN 588
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D S+ AL+S G D+ E+ ++ ++ + + Y ++E
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 236 VEIFDLMQQEKVK--PNSASFV----AVLSACGHAGH-----VDKALQIFTMMDDDFGLK 284
+++ L + ++ P +S V A + G+ H + K L++ + G
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYV 708
Query: 285 PKQEHFGCMVD-------LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
P ++ L S RL A +I P + ++ +L CH
Sbjct: 709 PDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
+++H L L K + ++ T L+++Y+ G + + + F + +NI +W
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSW--------- 88
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF----KLFEKMQSTGMVP 146
NS+IS + + G EA +LF + P
Sbjct: 89 --------------------------NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP 122
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+L AC L GK+ H V + D +A +L+ +Y + G A + F
Sbjct: 123 DFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF 179
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+K D WNAMISG+ +NG A+ + + M+ E VK ++ + ++L C +
Sbjct: 180 VDMPVK--DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDD 237
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
V + I + GL ++++ + GRL +A+ + ++ + ++S++
Sbjct: 238 VINGVLIHLHVLKH-GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296
Query: 327 A 327
A
Sbjct: 297 A 297
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 214/390 (54%), Gaps = 41/390 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
P+ +T +S+ S + L + R + G ++ E D +IG ALV+MY K G + CAH
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF +L + D +WN++++G++Q
Sbjct: 380 TVFDQLP------------------------------------RKDTISWNTLVTGYTQN 403
Query: 127 GMRFEAFKLFEKMQS-TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ EA + M+ +P+ S++ A + + AL+ G + H +I+ L D +
Sbjct: 404 GLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFV 463
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT LI +Y KCG+ A F +EI D WNA+I+ G +G E A+++F M E
Sbjct: 464 ATCLIDLYGKCGRLEDAMSLF--YEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAE 521
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+VK + +FV++LSAC H+G VD+ + F +M ++G+KP +H+GCMVDLLGR+G L++
Sbjct: 522 RVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEK 581
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A EL+R +P +P S++ +LL AC + N++LG + +L E++ EN +V+LSNIYA
Sbjct: 582 AYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYAN 641
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
+WE V ++R + DR L K PG S+ +
Sbjct: 642 TEKWEGVIKVRSLARDRGLRKTPGWSSVVV 671
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 162/343 (47%), Gaps = 44/343 (12%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+++T S++ CA + G +H LK SD + AL++MY K G L A VF
Sbjct: 221 DTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVF 280
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++ R++++WN++IA N A+ F+G+ G +PD T S+ S FSQ
Sbjct: 281 DQME-VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ---- 335
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD-LNKDESMATA 188
LS ++ + G VIR + L+KD + A
Sbjct: 336 -------------------------------LSDQRISRSILGFVIRREWLDKDVVIGNA 364
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKV 247
L++MY K G + A FDQ K D WN +++GY +NG A++ +++M++
Sbjct: 365 LVNMYAKLGYMNCAHTVFDQLPRK--DTISWNTLVTGYTQNGLASEAIDAYNMMEECRDT 422
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++V+++ A H G + + ++I + + L C++DL G+ GRL++A
Sbjct: 423 IPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAM 481
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPE 350
L E+P T +++++ + H GEE ++M E
Sbjct: 482 SLFYEIPRDTSVPWNAIIASLGIH---GRGEEALQLFKDMLAE 521
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 143/324 (44%), Gaps = 53/324 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF ++ AC SL+ G++VH K+ + D + +LV +Y + G L AH
Sbjct: 121 RPDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHK 177
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ D +WN+MISGF Q G
Sbjct: 178 VFVDMP------------------------------------VKDVGSWNAMISGFCQNG 201
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A + +M+ G+ V S+L CA + G H HV++ L+ D ++
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY K G+ A+ FDQ E++ D WN++I+ Y +N + +A+ F MQ +
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQMEVR--DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 248 KPNSASFVAVLSACGHAG--HVDKALQIFTM----MDDDFGLKPKQEHFGCMVDLLGRSG 301
+P+ + V++ S + +++ F + +D D + +V++ + G
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIG------NALVNMYAKLG 373
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
++ A + +LP +++L+
Sbjct: 374 YMNCAHTVFDQLPRKDTISWNTLV 397
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 159/354 (44%), Gaps = 30/354 (8%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC PN T++S+I A + + LQ G ++H +K D + T L+D+Y KCG
Sbjct: 416 MEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCG 475
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A ++F E+ ++ WN +IA + ++GR E+A++LF+ + E K D T+ S++
Sbjct: 476 RLEDAMSLFYEIPRDTSV-PWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLL 534
Query: 121 SGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIR 176
S S G+ E K F+ MQ G+ PSLK C+ +L L ++ + V
Sbjct: 535 SACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYL------EKAYELVRN 588
Query: 177 ADLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESA 235
+ D S+ AL+S G D+ E+ ++ ++ + + Y ++E
Sbjct: 589 MPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGV 648
Query: 236 VEIFDLMQQEKVK--PNSASFV----AVLSACGHAGH-----VDKALQIFTMMDDDFGLK 284
+++ L + ++ P +S V A + G+ H + K L++ + G
Sbjct: 649 IKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYV 708
Query: 285 PKQEHFGCMVD-------LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
P ++ L S RL A +I P + ++ +L CH
Sbjct: 709 PDYSFVYQDIEEDEKEQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCH 762
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 125/301 (41%), Gaps = 46/301 (15%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMML 90
+++H L L K + ++ T L+++Y+ G + + + F + +NI +W
Sbjct: 39 KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIH-KKNIFSW--------- 88
Query: 91 NGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF----KLFEKMQSTGMVP 146
NS+IS + + G EA +LF + P
Sbjct: 89 --------------------------NSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP 122
Query: 147 SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF 206
+L AC L GK+ H V + D +A +L+ +Y + G A + F
Sbjct: 123 DFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVF 179
Query: 207 DQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH 266
+K D WNAMISG+ +NG A+ + + M+ E VK ++ + ++L C +
Sbjct: 180 VDMPVK--DVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDD 237
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG 326
V + I + GL ++++ + GRL +A+ + ++ + ++S++
Sbjct: 238 VINGVLIHLHVLKH-GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIA 296
Query: 327 A 327
A
Sbjct: 297 A 297
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 206/387 (53%), Gaps = 39/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+VT S++S C L + G+ +HG ++ + SD +I T+L+ MY KC
Sbjct: 316 RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK------- 368
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R + +F G + K W+++I+G Q
Sbjct: 369 -------------------------RVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNE 399
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +A LF++M+ + P++ + S+L A A L+ L+ H ++ + AT
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 188 ALISMYMKCGQPSWARRFFD--QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
L+ +Y KCG A + F+ Q + K D W A+ISGYG +G+ +A+++F M +
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V PN +F + L+AC H+G V++ L +F M + + + H+ C+VDLLGR+GRLDE
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A LI +P EPT +V+ +LL AC H N LGE A KL E+EPEN +V+L+NIYA
Sbjct: 580 AYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
LGRW+D+ ++R M+ + L K PG S
Sbjct: 640 LGRWKDMEKVRSMMENVGLRKKPGHST 666
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 119/260 (45%), Gaps = 38/260 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T+ V A L ++ G VHG L+ D + AL+ MY+ G + A +V
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K D +WN+MISG+ + G
Sbjct: 175 FDVMKNR------------------------------------DVISWNTMISGYYRNGY 198
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A +F+ M + + + S+L C L L++G+ H V L + A
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY+KCG+ AR FD+ E + D W MI+GY +G+ E+A+E+ LMQ E V+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERR--DVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 249 PNSASFVAVLSACGHAGHVD 268
PN+ + +++S CG A V+
Sbjct: 317 PNAVTIASLVSVCGDALKVN 336
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 9/228 (3%)
Query: 82 NTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQS 141
+T+ L G A +LFE + ++N +I + + G+ +A +F +M S
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSL----LSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 142 TGM--VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
G+ VP V A +L ++KLG HG ++R+ +D+ + AL++MYM G+
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
AR FD +K D WN MISGY RNG A+ +FD M E V + A+ V++L
Sbjct: 169 EMARDVFDV--MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLP 226
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
CGH ++ + ++++ L K E +V++ + GR+DEAR
Sbjct: 227 VCGHLKDLEMGRNVHKLVEEK-RLGDKIEVKNALVNMYLKCGRMDEAR 273
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 137/322 (42%), Gaps = 39/322 (12%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S + + T +S++ C L L+ GR VH L + + ALV+MYLKCG + A
Sbjct: 213 SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEA 272
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF ++ + D TW MI+G+++
Sbjct: 273 RFVFDRME------------------------------------RRDVITWTCMINGYTE 296
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G A +L MQ G+ P+ + S++S C D + GK HG +R + D +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
T+LISMY KC + R F P W+A+I+G +N A+ +F M++E
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGP--WSAIIAGCVQNELVSDALGLFKRMRRE 414
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+PN A+ ++L A + +A+ I + G + +V + + G L+
Sbjct: 415 DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLES 473
Query: 306 ARELIRELPEPTVSVYHSLLGA 327
A ++ + E S L GA
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGA 495
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 207/385 (53%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN +T +S++ LL L+ GR++HG +K + IG A++DMY KCG + A+
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 493
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L K D +WNSMI+ +Q
Sbjct: 494 IFGRLS------------------------------------KRDIVSWNSMITRCAQSD 517
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +F +M +G+ +++ LSACA+L + GK HG +I+ L D +
Sbjct: 518 NPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSES 577
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQEK 246
LI MY KCG A FD +K + WN++I+ YG +G+ + ++ +F +++++
Sbjct: 578 TLIDMYAKCGNLKAAMNVFDT--MKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSG 635
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+P+ +F+ ++S C H G VD+ ++ F M D+G++P+QEH+ C+VDL GR+GRL EA
Sbjct: 636 NRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEA 695
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E ++ +P P V+ +LLGA H N +L + + +L +++P N +V++SN +A
Sbjct: 696 YETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNAHANT 755
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G WE V ++R ++ +R++ K+PG S
Sbjct: 756 GEWESVTKVRSLMKEREVQKIPGYS 780
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 156/324 (48%), Gaps = 45/324 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN+VTF V+S CAS L + G Q+HGL + + I +L+ MY KCG
Sbjct: 232 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCG------- 284
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R + A++LF ++ + D TWN MISG+ Q G
Sbjct: 285 -------------------------RFDDAIKLFRMMS----RADTVTWNCMISGYVQSG 315
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ E+ F +M S+G++P +S+L + + L+ ++ H +++R ++ D + +
Sbjct: 316 LMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTS 375
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI Y KC S A++ F Q D + AMISGY NG A+E+F + + K+
Sbjct: 376 ALIDAYFKCRGVSMAQKIFSQ--CNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKI 433
Query: 248 KPNSASFVAVLSACGH--AGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSGRLD 304
PN + V++L G A + + L F ++ F + + GC ++D+ + GR++
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGF-IIKKGFD---NRCNIGCAVIDMYAKCGRMN 489
Query: 305 EARELIRELPEPTVSVYHSLLGAC 328
A E+ L + + ++S++ C
Sbjct: 490 LAYEIFGRLSKRDIVSWNSMITRC 513
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 154/359 (42%), Gaps = 43/359 (11%)
Query: 21 CASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS-RNIL 79
C++L L+ G+QVH + D+ ++ MY CG +F L +I
Sbjct: 41 CSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIR 100
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
WN++I+ + G +A+ + + G PD +T+ ++ L + FK E +
Sbjct: 101 PWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVAL----KNFKGIEFL 156
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
T + C +E +A++LI Y++ G+
Sbjct: 157 SDTVSSLGMDC-------------------------------NEFVASSLIKAYLEYGKI 185
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
A + FD+ + D WN M++GY + G +S ++ F LM+ +++ PN+ +F VLS
Sbjct: 186 DVAGKLFDR--VLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS 243
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVS 319
C +D +Q+ ++ GL + ++ + + GR D+A +L R +
Sbjct: 244 VCASKLLIDLGVQLHGLVVVS-GLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTV 302
Query: 320 VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI-LSNIYAGLGRWEDVGRIRQM 377
++ ++ ++ S L EE + EM P I S++ + ++E++ RQ+
Sbjct: 303 TWNCMISG---YVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQI 358
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 3/208 (1%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L C++L+ L+ GK+ H VI ++ D ++ MY CG S + F + + +
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
WN++IS + R G A+ + M V P+ ++F ++ AC + K ++
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KGIEF 155
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL-GACWCHL 332
+ G+ + ++ G++D A +L + + +++ +L G C
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215
Query: 333 NSDLGEEMA-MKLQEMEPENPTPFVILS 359
+ + + + M++ ++ P T +LS
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLS 243
>gi|222624644|gb|EEE58776.1| hypothetical protein OsJ_10296 [Oryza sativa Japonica Group]
Length = 419
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 211/379 (55%), Gaps = 21/379 (5%)
Query: 16 SVISACASLLYLQFGRQVHGLTL-KIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
+ + ACA L + GR +H L L + SD + TAL+DMY KCG + A VF E+
Sbjct: 52 TALRACAHLADVASGRLIHALVLTRPALASDAVAATALLDMYSKCGLVASARKVFDEMAS 111
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
+ + WN ++A +G E A+ L + G PD + A
Sbjct: 112 RGDPVVWNALLACYARHGLPEHALALAVKMRGIGLCPD---------------LYGRARA 156
Query: 135 LFEKMQSTG--MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF M G ++PS ++++L A A+++ +K GKE HG+ + A + ++ ++++AL+ M
Sbjct: 157 LFRAMMVAGGRVLPSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDM 216
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG ARR FD+ + WN+MI G +G + AV +FD M ++ KP+
Sbjct: 217 YAKCGLVLEARRLFDKMPQR--STVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHL 274
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+F AVL+AC + G V+ ++ M ++G++P+ EH+ CMV LLGR+GRLDEA IR
Sbjct: 275 TFTAVLTACSYGGMVEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLDEAYGFIRA 334
Query: 313 LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
+P EP V+ +LLGAC H N +L E A +L +EP+N ++LS+ A G+ +DV
Sbjct: 335 MPLEPDRFVWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDV 394
Query: 372 GRIRQMINDRQLTKLPGIS 390
+I++++ R+L KL S
Sbjct: 395 FKIKRLVKRRRLKKLDSYS 413
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S T +++ A A++ ++ G++VHG ++ + + + +ALVDMY KCG + A +
Sbjct: 170 PSSATISTILPAFANVADVKHGKEVHGYSVVAGVEQELTVSSALVDMYAKCGLVLEARRL 229
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ R+ +TWN+MI G+ +G ++A+ LF+ + +G KPD T+ ++++ S GM
Sbjct: 230 FDKMP-QRSTVTWNSMIFGLANSGHCQEAVGLFDRMLRDGAKPDHLTFTAVLTACSYGGM 288
Query: 129 RFEAFKLFEKMQ-STGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
L+ MQ G+ P L+ C+ +L L E +G + L D
Sbjct: 289 VEVGKILYRAMQVEYGVEPRLEHYACMVHLLGRAGRLD------EAYGFIRAMPLEPDRF 342
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ G A + ++PD+ A + S G+ + +I L++
Sbjct: 343 VWGALLGACRSHGNIELAELAASRLLAVEPDNAASCLLLSSALANAGKQDDVFKIKRLVK 402
Query: 244 QEKVK 248
+ ++K
Sbjct: 403 RRRLK 407
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 213/383 (55%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T S++SAC+ L L+ G++VHG ++ + D + +++ +Y+ CG L +
Sbjct: 478 PDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVL 537
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ N+++ +WN++I+G Q G
Sbjct: 538 FDAMED-------NSLV-----------------------------SWNTVITGHLQNGF 561
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LF +M G+ P + +V AC+ L +L+LG+E H + ++ L + +A +
Sbjct: 562 PERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACS 621
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+I MY K G + + + F+ +K A WNAMI GYG +G + A+++F+ MQ+
Sbjct: 622 IIDMYAKNGAITQSSKVFNG--LKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRN 679
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+ VL+AC H+G + + L+ M FGLKP +H+ C++D+LGR+G+LD A
Sbjct: 680 PDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALR 739
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+ E+ EP V +++SLL C H N ++GE++A KL +EPE P +V+LSN+YAGLG+
Sbjct: 740 VAAEMSEEPDVGIWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGK 799
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+DV ++RQ + + L K G S
Sbjct: 800 WDDVRQVRQRMKEMSLRKDAGCS 822
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 148/324 (45%), Gaps = 51/324 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ + VT ++ + C L +++H +LK E D ++ A V Y KCG L A
Sbjct: 376 KADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQR 435
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ LN +WN++I G++Q
Sbjct: 436 VFHGIRSK-------------TLN-----------------------SWNALIGGYAQSS 459
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ +M+++G++P V S+LSAC+ L +L+LGKE HG +IR L +D +
Sbjct: 460 DPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 519
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+++S+Y+ CG+ + FD E + WN +I+G+ +NG E A+ +F M +
Sbjct: 520 SVLSLYIHCGELCTVQVLFDAME--DNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGI 577
Query: 248 KPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFGLKPKQEHFGC-MVDLLGRSG 301
+P S + V AC G A + +++D+ C ++D+ ++G
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDN-------AFIACSIIDMYAKNG 630
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
+ ++ ++ L E + + +++++
Sbjct: 631 AITQSSKVFNGLKEKSAASWNAMI 654
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 40/255 (15%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++V+ CA + G+ VHG +K+ + ++ AL+DMY K GC+ + +
Sbjct: 274 PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMI 333
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ L ++N+++WN +M+ GFS G
Sbjct: 334 FK-LNNNKNVVSWN-----------------------------------TMVGGFSAEGD 357
Query: 129 RFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
F L +M S + + + + C D S L KE H + ++ + DE +A
Sbjct: 358 IHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLA 417
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
A ++ Y KCG S+A+R F K + WNA+I GY ++ + +++ M+
Sbjct: 418 NAFVASYAKCGSLSYAQRVFHGIRSKTLNS--WNALIGGYAQSSDPRLSLDAHLQMKNSG 475
Query: 247 VKPNSASFVAVLSAC 261
+ P++ + ++LSAC
Sbjct: 476 LLPDNFTVCSLLSAC 490
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 94/167 (56%), Gaps = 6/167 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P ++ ++V AC+ L L+ GR+ H LK + + I +++DMY K G + +
Sbjct: 578 QPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSK 637
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF LK ++ +WN MI G ++GR+++A++LFE + G PD T+ +++ + G
Sbjct: 638 VFNGLK-EKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSG 696
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADL-SALKLGKE 169
+ E + ++M+S+ G+ P+LK CV +L L +AL++ E
Sbjct: 697 LLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAE 743
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 168/433 (38%), Gaps = 97/433 (22%)
Query: 7 DEPNSVTFISVISACASLLY-------LQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLK 58
DE +S F+ V A LL ++ GR++H L + +SD ++ T ++ MY
Sbjct: 73 DESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAM 132
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------------- 102
CG + + F L+ S+N+ WN +I+ N + +E+F
Sbjct: 133 CGSPDDSRSAFDALR-SKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFP 191
Query: 103 --------------GLA------HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQST 142
GLA G D N+++S + G +A KLF+ M
Sbjct: 192 CVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPER 251
Query: 143 GMV-------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+V P + V +VL CA + +GK HG ++ L+K+
Sbjct: 252 NLVSWNSMIRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKEL 311
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ AL+ MY K G ++ F K + WN M+ G+ G+ FDL++
Sbjct: 312 VVNNALMDMYSKWGCIIDSQMIFKLNNNK--NVVSWNTMVGGFSAEGDIHGT---FDLLR 366
Query: 244 Q-----EKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHF------ 290
Q E VK + + + + C + K L +++ KQE
Sbjct: 367 QMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSL---------KQEFVYDELLA 417
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD----LGEEMAMKLQE 346
V + G L A+ + + T++ +++L+G +SD L + MK
Sbjct: 418 NAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGG--YAQSSDPRLSLDAHLQMKNSG 475
Query: 347 MEPENPTPFVILS 359
+ P+N T +LS
Sbjct: 476 LLPDNFTVCSLLS 488
>gi|125582503|gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/380 (34%), Positives = 213/380 (56%), Gaps = 15/380 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S SACA L + R++HG + + ++ A+VD Y K G + A VF ++
Sbjct: 172 TVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQM 231
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++W +MIAG + A+++F+ + + D W ++ISG Q G A
Sbjct: 232 T-IRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQ----DAIAWTALISGHEQNGEEEIA 286
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES---MATAL 189
+LFE+M G+VP+ + S L ACA + + GKE HG ++R + D + AL
Sbjct: 287 LELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNAL 346
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A FD+ + D WN+M++G+ NG+ + ++ +F+ M +++V+P
Sbjct: 347 IDMYSKCGDMVAAMAVFDR--MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQP 404
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+AVL+AC HAG V +I M D G++P+ EH+ +D LGR+ +L+EA E
Sbjct: 405 TYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNRQLEEASEF 463
Query: 310 IRELPEP----TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
I+ L T + +LLGAC H N ++ EE+A L ++EPEN +V+LSNIY+
Sbjct: 464 IKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAA 523
Query: 366 GRWEDVGRIRQMINDRQLTK 385
G+W+D ++R ++ + L K
Sbjct: 524 GQWDDARQVRALMKGKGLRK 543
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD---TMIGTALVDMYLKCGCLPCA 65
P +S + ACA + + G++VHG L+ SD I AL+DMY KCG + A
Sbjct: 300 PTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAA 359
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R+I++WN+M+ G NG+ ++++ +FE + + +P T+ ++++ S
Sbjct: 360 MAVFDRML-ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSH 418
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLNKDES 184
G+ + ++ E MQ G+ P + + + A L+ E G + L S
Sbjct: 419 AGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGS 478
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L + ++ G A + F+++P++ + + + Y G+++ A ++ LM+
Sbjct: 479 WGALLGACHVH-GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK 537
Query: 244 QEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDF 281
+ ++ + A + H D +A +I+ M+D F
Sbjct: 538 GKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLF 580
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 61/298 (20%)
Query: 60 GCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
G LP A + + SRN++++NT+I+ + +GR +A+ +F LA +
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARD----------- 158
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
G Q + + F V S SACA L + +E HG V+ +
Sbjct: 159 --RGLGQQQVAIDRF----------------TVVSAASACAGLRDARHLRELHGAVVVSG 200
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIK-------------------------- 212
+ MA A++ Y K G+ AR FDQ I+
Sbjct: 201 MEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFD 260
Query: 213 ---PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
D W A+ISG+ +NGE E A+E+F+ M E V P + V+ L AC G V +
Sbjct: 261 MMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVAR 320
Query: 270 ALQIFT-MMDDDFGLKPKQEHF-GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ ++ G P ++D+ + G + A + + E + ++S++
Sbjct: 321 GKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMV 378
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 209/385 (54%), Gaps = 23/385 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT I V+S+CA L L GR+ H + + + AL+DMY+KCG L A
Sbjct: 177 KPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARK 236
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++ +++W TM LF+ + + P WN+MI G+
Sbjct: 237 LFDSMT-NKTMVSWTTM---------------LFDEMPDKDVVP----WNAMIGGYVHAN 276
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +MQ+ + P + S LSAC+ L AL +G H ++ + +L+ + ++ T
Sbjct: 277 RGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGT 336
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG+ + A + F E+ + W A+ISG +G A+ F M V
Sbjct: 337 ALIDMYAKCGKITKAIQVFQ--ELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 394
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +F+ +LSAC H G V++ + F+ M F L PK +H+ CMVDLLGR+G L+EA
Sbjct: 395 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 454
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
ELI+ +P E V+ +L AC H N +GE A KL +M+P + +V+L+N+Y
Sbjct: 455 ELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAE 514
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
W++ G+ R+++ R + K PG S+
Sbjct: 515 MWKEAGKXRKLMRQRGVEKTPGCSS 539
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 156/346 (45%), Gaps = 51/346 (14%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+C +P++ T+ + ACA L ++ G ++ G L + SD + A++ + + CG
Sbjct: 71 QCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG-- 128
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
+L G+R + + + D +WNSMI+G
Sbjct: 129 --------DLDGARKMFDKSCV--------------------------RDLVSWNSMING 154
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ + G +EA + +M+ G+ P + V+S+CA L L LG+E+H ++ L
Sbjct: 155 YVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLT 214
Query: 183 ESMATALISMYMKCGQPSWARRFFDQ-------------FEIKPD-DPAFWNAMISGYGR 228
+A AL+ MYMKCG AR+ FD F+ PD D WNAMI GY
Sbjct: 215 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVH 274
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
+ A+ +F+ MQ + P+ + V+ LSAC G +D + I ++ L
Sbjct: 275 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKH-ELSLNVA 333
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS 334
++D+ + G++ +A ++ +ELP + +++ H N+
Sbjct: 334 LGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 379
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+ +WN I GF EA L+++ +Q G P + ACA LS +++G
Sbjct: 40 NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 99
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E GHV+ + D ++ A+I + + CG AR+ FD+ ++ D WN+MI+GY R
Sbjct: 100 EILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVR--DLVSWNSMINGYVR 157
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
G A+ + M+ E +KP+ + + V+S+C +D + ++++ GLK
Sbjct: 158 RGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN-GLKLTVP 216
Query: 289 HFGCMVDLLGRSGRLDEARE----------------LIRELPEPTVSVYHSLLGACWCHL 332
++D+ + G L+ AR+ L E+P+ V +++++G ++
Sbjct: 217 LANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGG---YV 273
Query: 333 NSDLGEEMAMKLQEMEPENPTP 354
+++ G+E EM+ N P
Sbjct: 274 HANRGKEALALFNEMQAMNINP 295
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 116/252 (46%), Gaps = 14/252 (5%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+ ++ P+ VT +S +SAC+ L L G +H K E + +GTAL+DMY KCG +
Sbjct: 289 QAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKI 348
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VFQEL G RN LTW +I+G+ L+G + A+ F + PD T+ ++S
Sbjct: 349 TKAIQVFQELPG-RNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSA 407
Query: 123 FSQLGMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLN 180
G+ E K F +M S + P LK + ++ L+ +E I AD
Sbjct: 408 CCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEAD-- 465
Query: 181 KDESMATALISMYMKC---GQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAV 236
A +++ C G R + ++ P D + + + YG ++ A
Sbjct: 466 -----AVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAG 520
Query: 237 EIFDLMQQEKVK 248
+ LM+Q V+
Sbjct: 521 KXRKLMRQRGVE 532
>gi|242054761|ref|XP_002456526.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
gi|241928501|gb|EES01646.1| hypothetical protein SORBIDRAFT_03g037820 [Sorghum bicolor]
Length = 552
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 133/389 (34%), Positives = 206/389 (52%), Gaps = 43/389 (11%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PN+ T + ACA++ GRQ+H L+ ++ + T L+++Y KC + A
Sbjct: 121 SPRPNTFTLAFALKACAAVPAPGEGRQLHAQALRQGLEASAYVQTGLLNLYAKCEQVALA 180
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA--TWNSMISGF 123
VF +G PD + W++MI+G+
Sbjct: 181 RTVF-------------------------------------DGMAPDKSLVAWSAMINGY 203
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
S++GM EA LF +MQ+ G+ P + V+SACA AL LGK H ++ R + D
Sbjct: 204 SRVGMVTEALGLFREMQAVGVEPDEVTMVGVISACAKAGALDLGKWVHAYIDRKGITVDL 263
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
++TALI MY KCG AR FD K D W+AMI G+ +G E A+ +F M
Sbjct: 264 ELSTALIDMYAKCGLIERARGVFDAMVEK--DTKAWSAMIVGFAIHGLVEDALGLFSRML 321
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ KV+PN+ +F+ VLSAC H+G VD + +++M + G+KP E++GCM+DLL RSG L
Sbjct: 322 ELKVRPNNVTFIGVLSACAHSGLVDDGRRYWSIM-QNLGIKPSMENYGCMIDLLCRSGLL 380
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
D+A + ++P P ++ +LL AC D+ E + +L E+EP NP +V+LSN+
Sbjct: 381 DDAYSFVIDMPISPNSIIWRTLLVACKSSNRIDIAESASKRLLELEPHNPENYVLLSNLC 440
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +W+ V +R+ + D +T + G S+
Sbjct: 441 ASNSQWDRVSYLRKKMKDSNVTAVAGCSS 469
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L PN+VTFI V+SACA + GR+ + + + ++D+ + G L
Sbjct: 323 LKVRPNNVTFIGVLSACAHSGLVDDGRRYWSIMQNLGIKPSMENYGCMIDLLCRSGLLDD 382
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
A++ ++ S N + W T++ + R + A
Sbjct: 383 AYSFVIDMPISPNSIIWRTLLVACKSSNRIDIA 415
>gi|357150199|ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 217/385 (56%), Gaps = 12/385 (3%)
Query: 9 PNSVTFISVI-SACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN + V+ +ACA + +Q R +H K + +I T+L+D Y + G + A
Sbjct: 111 PNQFVYPLVLRAACA--IGVQLVRSIHSHACKSGFHAYDVIRTSLLDGYSRYGMMLDARK 168
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L RN+++W +++G G+ A+ LF+ + D A WN+MI+G +Q G
Sbjct: 169 LFDGLT-ERNVISWTALVSGYARAGKIGDAIVLFDRMPER----DVAAWNAMITGCTQNG 223
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA + +M G + V+ VLSAC L LK+GK HG+ R+ + S+
Sbjct: 224 LFVEAVGICSRMVDEGFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSCVGFGSSVVN 283
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI MY KCG AR FD+F + WN++I+ +G +SA+ +FD M+ E +
Sbjct: 284 GLIDMYGKCGNLKEARWMFDEFSDR--SLTTWNSLINCLALHGHSKSAIAVFDEMRDEGI 341
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ +FV +L+AC H G VD+ L F +M D+ ++P+ EH+GC+VDLLGR+GR ++A
Sbjct: 342 EPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGCIVDLLGRAGRFEDAM 401
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+I ++ +P ++ SLL AC H +L E KL ++ P N V+L+N+Y+ G
Sbjct: 402 NVINDMKVQPDEVIWGSLLNACRTHRQLELAEFSVRKLLQLNPNNANYVVMLANLYSEGG 461
Query: 367 RWEDVGRIRQMINDRQL-TKLPGIS 390
WE+V +IR+++ + + KLPG S
Sbjct: 462 SWEEVTKIRKLMKEDIMGKKLPGCS 486
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 146/379 (38%), Gaps = 79/379 (20%)
Query: 14 FISVISACASLLYLQFGRQVHG---LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQ 70
F++V+S CA+L +L +Q+HG +T + QS T L L+ CLP A +F
Sbjct: 12 FVAVLSRCATLAHL---KQLHGRSVVTARAASQSTTF--QLLRFASLRLSCLPYARRLFD 66
Query: 71 ELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRF 130
N + ML+ + + G
Sbjct: 67 STPHP------NVFLYSAMLSAYAAASPAQAYG--------------------------H 94
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
+A LF +M G + V ++ A ++L + H H ++ + + + T+L+
Sbjct: 95 DALALFLRMLRRGRPAPNQFVYPLVLRAACAIGVQLVRSIHSHACKSGFHAYDVIRTSLL 154
Query: 191 SMYMKCGQPSWARRFFDQ----------------------------FEIKPD-DPAFWNA 221
Y + G AR+ FD F+ P+ D A WNA
Sbjct: 155 DGYSRYGMMLDARKLFDGLTERNVISWTALVSGYARAGKIGDAIVLFDRMPERDVAAWNA 214
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKALQIFTMMD- 278
MI+G +NG + AV I M E + N + VLSACGH G + K + +
Sbjct: 215 MITGCTQNGLFVEAVGICSRMVDEGFQLNGTTVSCVLSACGHLGMLKIGKVVHGYAWRSC 274
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
FG ++D+ G+ G L EAR + E + +++ ++SL+ H +S +
Sbjct: 275 VGFG----SSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSLINCLALHGHS---K 327
Query: 339 EMAMKLQEMEPENPTPFVI 357
EM E P V+
Sbjct: 328 SAIAVFDEMRDEGIEPDVV 346
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 208/382 (54%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ TF S+++AC +L L+ G+Q+H ++ + +G+ALVDMY KC + A VF
Sbjct: 271 DQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVF 330
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + +NI++W +I G+ Q G
Sbjct: 331 RRMT-CKNIISWTALIV-----------------------------------GYGQNGCS 354
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA ++F +MQ G+ P + SV+S+CA+L++L+ G + H + + L +++ AL
Sbjct: 355 EEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNAL 414
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+++Y KCG A R FD E+ D W A++SGY + G + +++F+ M + VKP
Sbjct: 415 VTLYGKCGSIEDAHRLFD--EMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKP 472
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ VLSAC AG V+K F M D G+ P +H+ CM+DL RSG+L EA E
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEF 532
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I+++P P + +LL AC + ++G+ A L E++P+NP +V+L +++A G+W
Sbjct: 533 IKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQW 592
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+V ++R+ + DRQ+ K PG S
Sbjct: 593 NEVAQLRRGMRDRQVKKEPGCS 614
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 164/308 (53%), Gaps = 8/308 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ +T +++ A ++L G+Q H L++ ++ +G+ LVDMY K + A
Sbjct: 135 SVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDA 194
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F E+ S+N++ +NTMI G++ E+A LFE + D TW +M++GF+Q
Sbjct: 195 KRAFDEVD-SKNVVMYNTMITGLLRCKMVEEARRLFEVMTDR----DSITWTTMVTGFTQ 249
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ EA ++F +M+ G+ S+L+AC LSAL+ GK+ H ++IR + + +
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFV 309
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+AL+ MY KC A F + K + W A+I GYG+NG E AV +F MQ++
Sbjct: 310 GSALVDMYSKCRSIKLAETVFRRMTCK--NIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+ P+ + +V+S+C + +++ Q F + GL +V L G+ G +++
Sbjct: 368 GIDPDDYTLGSVISSCANLASLEEGAQ-FHCLALVSGLMHYITVSNALVTLYGKCGSIED 426
Query: 306 ARELIREL 313
A L E+
Sbjct: 427 AHRLFDEM 434
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 20/250 (8%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T SVIS+CA+L L+ G Q H L L + ALV +Y KCG + AH
Sbjct: 370 DPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHR 429
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ + +W +++G GR+++ ++LFE + +G KPD T+ ++S S+ G
Sbjct: 430 LFDEMSFHDQV-SWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488
Query: 128 MRFEAFKLFEKMQST-GMVP---SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ F MQ G+VP C+ + S L KE + + ++ D
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKL------KEAEEFIKQMPMHPDA 542
Query: 184 SMATALISMY-----MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L+S M+ G+ WA + EI P +PA + + S + G++ ++
Sbjct: 543 IGWGTLLSACRLRGDMEIGK--WAAE--NLLEIDPQNPASYVLLCSMHAAKGQWNEVAQL 598
Query: 239 FDLMQQEKVK 248
M+ +VK
Sbjct: 599 RRGMRDRQVK 608
>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 226/417 (54%), Gaps = 40/417 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT +++SA A L+ G++V ++ +SD ++ + VDMY KCG + A VF
Sbjct: 368 VTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDS 427
Query: 72 --------------------LKGSR--------------NILTWNTMIAGMMLNGRSEKA 97
L G N++TWN +I ++ NG+ +A
Sbjct: 428 TVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEA 487
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
E+F + G P+ +W +M++G Q G EA KMQ +GM P++ +T LSA
Sbjct: 488 KEMFLQMQSSGTFPNMISWTTMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSA 547
Query: 158 CADLSALKLGKETHGHVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDP 216
C +L++L G+ HG++IR + S+ T+L+ MY KCG + A R F ++ + P
Sbjct: 548 CVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAERVFGS-KLYSELP 606
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFT 275
+NAMIS Y G + AV ++ ++++ +KP++ + VLSAC HAG +++A++IFT
Sbjct: 607 -LYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHAGDINQAIEIFT 665
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN- 333
M G+KP EH+G MVDLL +G ++A LI E+P +P + SL+ +C +
Sbjct: 666 DMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEMPYKPDARMIQSLVASCKKQQHK 725
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
S+L + ++ +L E EPEN +V +SN YA G W++V ++R+M+ + L K PG S
Sbjct: 726 SELMDYLSSQLLESEPENSGNYVRVSNAYAVEGSWDEVVKMREMMKVKGLKKKPGCS 782
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 52/358 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +V AC +L + +FGR VHG K + ++L DMY KCG L A V
Sbjct: 163 PDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKV 222
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ RN++ WN +++ G+ Q GM
Sbjct: 223 FDEIP-ERNVVAWN-----------------------------------ALMVGYVQNGM 246
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +L M+ G+ P+ V++ LSA A++ ++ GK++H I L D + T+
Sbjct: 247 NEEAIRLLSDMRKEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTS 306
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+++ Y K G +A FD+ K D WN +ISGY G E+A+ + LM+ E +K
Sbjct: 307 ILNFYCKVGLIDYAEMIFDRMIEK--DVVTWNLLISGYVHQGLVENAIYMCQLMRLENLK 364
Query: 249 PNSASFVAVLSACGHAGHVD--KALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ + ++SA ++ K +Q + + + D L VD+ + G +
Sbjct: 365 FDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLASTA------VDMYAKCGSV 418
Query: 304 DEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
+A+++ + + ++++LL A + S L E EM+ E+ P VI N+
Sbjct: 419 VDAKKVFDSTVQKDLILWNTLLAA---YAESGLSGEALRLFYEMQLESVPPNVITWNL 473
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 177/393 (45%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+Q H + + + D ++GT++++ Y K G + A
Sbjct: 263 EPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEM 322
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++TWN +I+G + G E A+ + + + E K D T
Sbjct: 323 IFDRMI-EKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVT------------ 369
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++++SA A LKLGKE + IR D +A+
Sbjct: 370 -----------------------LSTLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLAS 406
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY KCG A++ FD K D WN +++ Y +G A+ +F MQ E V
Sbjct: 407 TAVDMYAKCGSVVDAKKVFDSTVQK--DLILWNTLLAAYAESGLSGEALRLFYEMQLESV 464
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++ ++ + G V++A ++F M G P + M++ L ++G +EA
Sbjct: 465 PPNVITWNLIILSLLRNGQVNEAKEMFLQMQSS-GTFPNMISWTTMMNGLVQNGCSEEAI 523
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV--ILSNI 361
+R++ E P V L AC + G + + + + + + L ++
Sbjct: 524 LFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDM 583
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G D+ + ++ + ++LP +A I+
Sbjct: 584 YAKCG---DINKAERVFGSKLYSELPLYNAMIS 613
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 151/366 (41%), Gaps = 55/366 (15%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
F ++ C L+ G+Q+H LK + I T LV Y KC L A +F +
Sbjct: 65 FGEILQGCVYXRDLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSK 124
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
L+ RN+ +W +I G K ++G+
Sbjct: 125 LR-VRNVFSWAAII----------------------GVK-------------CRIGLVEG 148
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
A F +M G+ P V +V AC L + G+ HG+V +A L+ +A++L
Sbjct: 149 ALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLAD 208
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
MY KCG AR+ FD EI + WNA++ GY +NG E A+ + M++E V+P
Sbjct: 209 MYGKCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTR 266
Query: 252 ASFVAVLSACGH-----AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ LSA + G A+ I ++ D L +F C V G +D A
Sbjct: 267 VTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKV------GLIDYA 320
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGL 365
+ + E V ++ L+ +++ L E Q M EN V LS + +
Sbjct: 321 EMIFDRMIEKDVVTWNLLISG---YVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAA 377
Query: 366 GRWEDV 371
R +++
Sbjct: 378 ARTQNL 383
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 117/249 (46%), Gaps = 17/249 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAHN 67
PN + +SAC +L L FGR +HG ++ ++ S + I T+LVDMY KCG + A
Sbjct: 536 PNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCGDINKAER 595
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHE-GFKPDPATWNSMISGFSQL 126
VF K + +N MI+ L G ++A+ L+ L + G KPD T +++S +
Sbjct: 596 VFGS-KLYSELPLYNAMISAYALYGNVKEAVALYRSLEEDVGIKPDNITITNVLSACNHA 654
Query: 127 GMRFEAFKLFEKMQST-GMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G +A ++F M S GM P L+ V + SA AL L +E
Sbjct: 655 GDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAGETEKALSLIEEM-------PYKP 707
Query: 182 DESMATALISMYMKCGQPSWARRFFDQ--FEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
D M +L++ K S + E +P++ + + + Y G ++ V++
Sbjct: 708 DARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVSNAYAVEGSWDEVVKMR 767
Query: 240 DLMQQEKVK 248
++M+ + +K
Sbjct: 768 EMMKVKGLK 776
>gi|296084817|emb|CBI27699.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 214/387 (55%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
P+S+T +++I A++ ++ ++ H +++ ++ + +G ++D Y KCG +
Sbjct: 387 RPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKY 446
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A N+F L RN++T N+MI+G + + + A +F ++ + D TWN M+ ++
Sbjct: 447 AVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMS----ETDLTTWNLMVRVYA 502
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +A LF ++Q GM P + + S+L ACA ++++ + ++ HG+VIRA N D
Sbjct: 503 ENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVR 561
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ A I MY KCG A + F D + AM+ G+ +G E A+ IF M +
Sbjct: 562 LNGAFIDMYSKCGSVFGAYKLF--LSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLE 619
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP+ AVL AC HAG VD+ +IF ++ G +P E + C+VDLL R GR+
Sbjct: 620 LGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIK 679
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A + +P E +++ +LLGAC H +LG +A L ++E +N +V++SN+YA
Sbjct: 680 DAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYA 739
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V IR+++ R+L K G S
Sbjct: 740 ADARWDGVMEIRRLMRTRELKKPAGCS 766
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 56/376 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC--A 65
+PNSVT V+ CA L G+ VH +K +S T+ G AL+ MY KCG L C A
Sbjct: 78 KPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCG-LVCSDA 135
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ F ++ FK D +WN++I+GFS+
Sbjct: 136 YAAFNRIE-----------------------------------FK-DVVSWNAVIAGFSE 159
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL---SALKLGKETHGHVI-RADLNK 181
EAFKLF M + P+ + S+L CA L + + GKE H HV+ R +L +
Sbjct: 160 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 219
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-D 240
D S+ +L+S Y++ GQ A F +K D WNA+I+GY NGE+ A+E+F +
Sbjct: 220 DVSVINSLMSFYLRIGQMEKAEFLFRN--MKSRDLVSWNAIIAGYASNGEWLKALELFSE 277
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ E +KP+S + V+VL AC H ++ A I + GL+ ++ +
Sbjct: 278 FISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKC 337
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGA-----CWCHLNSDLGEEMAMKLQEMEPENPTPF 355
A + + + ++++L A C HL + L M + + P++ T
Sbjct: 338 NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLL---HWMLREGIRPDSITIL 394
Query: 356 VILSNIYAGLGRWEDV 371
I+ YA + R + V
Sbjct: 395 TII-QYYAAVSRVKKV 409
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 58/369 (15%)
Query: 8 EPNSVTFISVISACASL---LYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLP 63
+PN T S++ CASL ++G++VH L+ +E D + +L+ YL+ G +
Sbjct: 179 QPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQME 238
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F+ +K D +WN++I+G+
Sbjct: 239 KAEFLFRNMKSR------------------------------------DLVSWNAIIAGY 262
Query: 124 SQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIR-ADLNK 181
+ G +A +LF + S + P + SVL ACA + L++ K HG++IR L +
Sbjct: 263 ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRE 322
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D S+ AL+S Y KC A + F I D WNA++ + +G V +
Sbjct: 323 DTSVGNALLSFYAKCNYTQAALQTF--LMISRKDLISWNAILDAFTESGCETHLVNLLHW 380
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVD 295
M +E ++P+S + + ++ V K + F ++ D G M+D
Sbjct: 381 MLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNG----MLD 436
Query: 296 LLGRSGRLDEARELIRELPEP-TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G + A + L E V +S++ ++NS ++ M + T
Sbjct: 437 AYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISG---YVNSSSHDDAYAIFNTMSETDLTT 493
Query: 355 FVILSNIYA 363
+ ++ +YA
Sbjct: 494 WNLMVRVYA 502
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 14/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT +S++ ACA + + RQ HG ++ +D + A +DMY KCG + A+
Sbjct: 523 KPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYK 581
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++++ + M+ G ++G E+A+ +F + G KPD +++ S G
Sbjct: 582 LFLS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 640
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K+F ++ G P+++ CV +L+ + K+ + V R + +
Sbjct: 641 LVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRI------KDAYTFVTRMPIEANA 694
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ L+ + R D F+I+ D+ + M + Y + ++ +EI LM
Sbjct: 695 NIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLM 754
Query: 243 Q-QEKVKPNSASFVAV 257
+ +E KP S++ V
Sbjct: 755 RTRELKKPAGCSWIEV 770
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 81 WNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GMRFEAFKLFEKM 139
++++ G++ A++ L E + DP WN ++SG + E +LF M
Sbjct: 12 YDSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAM 71
Query: 140 QSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
P+ + VL CA L GK H +VI++ L ALISMY KCG
Sbjct: 72 HMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGL 130
Query: 199 P-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
S A F++ E K D WNA+I+G+ N E A ++F M + ++PN A+ ++
Sbjct: 131 VCSDAYAAFNRIEFK--DVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASI 188
Query: 258 LSACG 262
L C
Sbjct: 189 LPVCA 193
>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 201/385 (52%), Gaps = 42/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP-CAHN 67
P++ TF SVI ACA L L G VH SD+ + AL+ Y K C P A
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAK-SCTPRVARK 164
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R+I+ WN SMISG+ Q G
Sbjct: 165 VFDEMP-QRSIVAWN-----------------------------------SMISGYEQNG 188
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA ++F KM+ + + P SVLSAC+ L +L G H ++ + + + +AT
Sbjct: 189 LANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLAT 248
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L++M+ +CG AR F + + + W AMISGYG +G A+E+F M+ V
Sbjct: 249 SLVNMFSRCGDVGRARAVF--YSMIEGNVVLWTAMISGYGMHGYGVEAMEVFHRMKARGV 306
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PNS +FVAVLSAC HAG +D+ +F M ++G+ P EH CMVD+ GR G L+EA
Sbjct: 307 VPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAY 366
Query: 308 ELIREL--PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ ++ L E +V+ ++LGAC H N DLG E+A L EPENP +V+LSN+YA
Sbjct: 367 QFVKGLNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALA 426
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR + V +R ++ R L K G S
Sbjct: 427 GRMDRVESVRNVMIQRGLKKQVGYS 451
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 91/201 (45%), Gaps = 11/201 (5%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L+ ++ H H++ ++ ++ T L+++ G ++ RR F + D +N++I
Sbjct: 23 LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRS--VSDPDSFLFNSLI 80
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-- 281
+ G AV + M ++ P++ +F +V+ AC L I T++
Sbjct: 81 KASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADL----SLLCIGTLVHSHVFV 136
Query: 282 -GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
G ++ +S AR++ E+P+ ++ ++S++ + ++ E+
Sbjct: 137 SGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEV 196
Query: 341 AMKLQE--MEPENPTPFVILS 359
K++E +EP++ T +LS
Sbjct: 197 FNKMRESRVEPDSATFVSVLS 217
>gi|302765741|ref|XP_002966291.1| hypothetical protein SELMODRAFT_86162 [Selaginella moellendorffii]
gi|300165711|gb|EFJ32318.1| hypothetical protein SELMODRAFT_86162 [Selaginella moellendorffii]
Length = 368
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 204/367 (55%), Gaps = 7/367 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + F+S+I AC+ L L+ G VH D I + LV+MY KCG L A +
Sbjct: 7 KPDKIVFVSLIDACSCLGDLRQGMGVHERLHAGGFDIDNSIASGLVNMYRKCGSLTGARS 66
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++L+WN +IAG G S +A+++F +A E D + +MIS +
Sbjct: 67 VFNKMD-RNDLLSWNALIAGYAEQGDSHEALQVFRWMACE----DVVSCTAMISAYVLHA 121
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA +L+ +++ GM SVL AC+ L+AL+ G+ H ++ L+ D +
Sbjct: 122 CHREALELYFRLEPEGMKSDRVTYLSVLEACSSLTALEQGRAVHASIVSRGLDSDTGLKN 181
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI++Y KCG A FD + D WN+MI+ Y +G E ++E+F M+ + +
Sbjct: 182 SLINLYGKCGSLKDAESLFDCMRCR--DLVTWNSMITTYSHHGRDEISLEVFMQMKLDGI 239
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV++L C HAG + + F + D+ ++ +H+ C++DLLGR+G LDEA
Sbjct: 240 QPNDVTFVSMLFVCSHAGLFEDGCKCFGSITADYSMELTVDHYNCVIDLLGRAGNLDEAE 299
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
L+ LPEP + +LLGAC H ++D A ++ E++P++ V+LSNIYA
Sbjct: 300 NLVANLPEPCSVDWMTLLGACRIHGDADRALRTAQRVAELDPDSLAGKVLLSNIYATARD 359
Query: 368 WEDVGRI 374
W+D G I
Sbjct: 360 WDDKGEI 366
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 47/270 (17%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M+ G+ P S++ AC+ L L+ G H + + D S+A+ L++MY KCG
Sbjct: 1 MEQEGIKPDKIVFVSLIDACSCLGDLRQGMGVHERLHAGGFDIDNSIASGLVNMYRKCGS 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV----------- 247
+ AR F++ + +D WNA+I+GY G+ A+++F M E V
Sbjct: 61 LTGARSVFNKMD--RNDLLSWNALIAGYAEQGDSHEALQVFRWMACEDVVSCTAMISAYV 118
Query: 248 --------------------KPNSASFVAVLSACG-----HAGHVDKALQIFTMMDDDFG 282
K + ++++VL AC G A + +D D G
Sbjct: 119 LHACHREALELYFRLEPEGMKSDRVTYLSVLEACSSLTALEQGRAVHASIVSRGLDSDTG 178
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE--M 340
LK +++L G+ G L +A L + + ++S++ H ++ E M
Sbjct: 179 LKNS------LINLYGKCGSLKDAESLFDCMRCRDLVTWNSMITTYSHHGRDEISLEVFM 232
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWED 370
MKL ++P N FV + + + G +ED
Sbjct: 233 QMKLDGIQP-NDVTFVSMLFVCSHAGLFED 261
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 194/340 (57%), Gaps = 8/340 (2%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
D + ++ Y++CG L A +FQ++ ++++++WNTMIAG G+ KA +F +
Sbjct: 352 DAVCWNTMISGYVQCGMLDEAMVLFQQMP-NKDMISWNTMIAGCAQGGQIRKAASIFRKM 410
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ + +WNS+ISGF Q G+ EA + F M+ LSA A+L+ L
Sbjct: 411 K----RRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSADWCTYACCLSASANLATL 466
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMIS 224
++G++ H ++R D S ALIS Y KCG+ AR+ FD+ ++ D WNA+I
Sbjct: 467 QIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEMVVQ--DIVSWNALID 524
Query: 225 GYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
GY NG + +F M+ V+P+ + V VLSAC HAG +D+ L F M + LK
Sbjct: 525 GYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEGLHFFNSMIKLYSLK 584
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
P EH+ CMVDLLGR+GRL EA EL++ + +P V+ +LLGAC H N ++ A K
Sbjct: 585 PVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLGACRVHKNHEIAWLAAEK 644
Query: 344 LQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQL 383
L E+EP + +V+LSNI G+W+D ++R ++ + L
Sbjct: 645 LFELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKESIL 684
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 59/274 (21%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G L A +F+E+ RN++++N M++ + +GR +A LF+ + + +P +WN
Sbjct: 23 RSGQLAAARRLFEEMP-RRNVVSYNAMVSALAHHGRLAEARRLFDEMP----RRNPVSWN 77
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
+M+ SQ G +A LF+ M +
Sbjct: 78 TMMVACSQHGRVEDARGLFDAMPA------------------------------------ 101
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDD--PAFWNAMISGYGRNGEYESA 235
++E T ++S Y++ G+ + AR D+ P + A +N MISGY +NG +E A
Sbjct: 102 ---RNEYSWTIMVSCYVRAGELTLARELLDRM---PGEKCAACYNTMISGYAKNGRFEDA 155
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+ + QE P+ S+ +VL + +++Q F M D + M++
Sbjct: 156 IALL----QEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPD-----KDLVSWNLMLE 206
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLL-GAC 328
R+G LD A +P P V + +L+ G C
Sbjct: 207 GYVRAGDLDVASAFFSRIPSPNVISWVNLVNGYC 240
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T+ +SA A+L LQ GRQ H L ++ SD+ G AL+ Y KCG + A VF E+
Sbjct: 452 TYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFDEM 511
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++I++WN +I G NG + + +F + +PD T ++S S G+ E
Sbjct: 512 V-VQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLIDEG 570
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADL 161
F M + SLK V + DL
Sbjct: 571 LHFFNSMIK---LYSLKPVAEHYTCMVDL 596
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
T +V Y++ G L A + + G + +NTMI+G NGR E A+ L + +
Sbjct: 108 TIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALLQEMP---- 163
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGK 168
PD +WNS++ G + + + F++M +V +L V + D+++ +
Sbjct: 164 APDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSR 223
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
+VI L++ Y + G+ AR FD+ + + WN ++SGY +
Sbjct: 224 IPSPNVIS---------WVNLVNGYCQAGRMGEARELFDR--MPERNVVAWNVLLSGYVQ 272
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQ 287
+ E+A +F M ++ NS S+ ++S +G + +A + + M D+ G K
Sbjct: 273 FSQVEAAYNLFIEMPEK----NSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTAL 328
Query: 288 EH-------------------------FGCMVDLLGRSGRLDEARELIRELPEPTVSVYH 322
H + M+ + G LDEA L +++P + ++
Sbjct: 329 MHGYLKSNLIDDARQLFDGIVVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNKDMISWN 388
Query: 323 SLLGAC 328
+++ C
Sbjct: 389 TMIAGC 394
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 62/280 (22%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
A+V G L A +F E+ RN ++WNTM+ +GR E A LF+ +
Sbjct: 46 NAMVSALAHHGRLAEARRLFDEMP-RRNPVSWNTMMVACSQHGRVEDARGLFDAMPAR-- 102
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ +W M+S + + G A +L ++M P KC +AC +
Sbjct: 103 --NEYSWTIMVSCYVRAGELTLARELLDRM------PGEKC-----AACYN--------- 140
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPA----FWNAMISG 225
+IS Y K G RF D + + PA WN+++ G
Sbjct: 141 ------------------TMISGYAKNG------RFEDAIALLQEMPAPDIVSWNSVLGG 176
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
RN E +V+ FD M + + S+ +L AG +D A F+ + P
Sbjct: 177 LIRNEEISRSVQFFDEMPDKDL----VSWNLMLEGYVRAGDLDVASAFFSRIP-----SP 227
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ +V+ ++GR+ EAREL +PE V ++ LL
Sbjct: 228 NVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLL 267
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 130/382 (34%), Positives = 200/382 (52%), Gaps = 39/382 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +T+I +I+ACAS L R++H ++ +D ++ TALV MY KCG + A
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQ 420
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + + D +W++MI + + G
Sbjct: 421 VFDAMS------------------------------------RRDVVSWSAMIGAYVENG 444
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EAF+ F M+ + P + ++L+AC L AL LG E + I+ADL +
Sbjct: 445 CGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGN 504
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+M +K G AR F+ + D WN MI GY +G A+++FD M +E+
Sbjct: 505 ALINMNVKHGSIERARYIFEN--MVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERF 562
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PNS +FV VLSAC AG V++ + F+ + D G+ P E +GCMVDLLGR+G LDEA
Sbjct: 563 RPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAE 622
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI +P +P S++ +LL AC + N D+ E A + EP + +V LS++YA G
Sbjct: 623 LLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAG 682
Query: 367 RWEDVGRIRQMINDRQLTKLPG 388
WE+V ++R+++ R + K G
Sbjct: 683 MWENVAKVRKVMESRGVRKEQG 704
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 44/351 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ +TF+ V+ AC+S L+ G++ H +K+ SD IGTALV MY+K G + A
Sbjct: 159 EPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQ 218
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L +K D +T+N MI G+++ G
Sbjct: 219 VFDGL------------------------------------YKRDVSTFNVMIGGYAKSG 242
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+AF+LF +MQ G P+ S+L C+ AL GK H + L D +AT
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVAT 302
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MYM CG ARR FD+ +++ D W MI GY N E A +F MQ+E +
Sbjct: 303 ALIRMYMGCGSIEGARRVFDKMKVR--DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+P+ +++ +++AC + + A +I + ++ FG + +V + + G + +A
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVD--TALVHMYAKCGAIKDA 418
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R++ + V + +++GA ++ + GEE M+ N P V+
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGA---YVENGCGEEAFETFHLMKRNNVEPDVV 466
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 6/185 (3%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
NI NT+I + G +A + F+ + ++ TWN++I+G++QLG EAF LF
Sbjct: 95 NIYELNTLIKLHSICGNMLEARQTFDSVENK----TVVTWNAIIAGYAQLGHVKEAFALF 150
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M M PS+ VL AC+ + LKLGKE H VI+ D + TAL+SMY+K
Sbjct: 151 RQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKG 210
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G AR+ FD + D + +N MI GY ++G+ E A ++F MQQE KPN SF++
Sbjct: 211 GSMDGARQVFDG--LYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLS 268
Query: 257 VLSAC 261
+L C
Sbjct: 269 ILDGC 273
>gi|302775096|ref|XP_002970964.1| hypothetical protein SELMODRAFT_95056 [Selaginella moellendorffii]
gi|300160946|gb|EFJ27562.1| hypothetical protein SELMODRAFT_95056 [Selaginella moellendorffii]
Length = 357
Score = 234 bits (597), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 204/361 (56%), Gaps = 14/361 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P V F+SV+ ACA+ ++ GRQ+H + +E D I TA+V+ Y KCG L A +
Sbjct: 8 PTKVAFLSVLEACAATGSVKEGRQIHAEVQSSLELSRDAKIQTAIVNFYGKCGLLVEARS 67
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + R I++ N MI+ + +G+ ++A ELF+ L P+ +TWNSMI G++QLG
Sbjct: 68 MLDAAE-DRCIVSTNAMISAYVKHGQMDRARELFDSLE----SPNVSTWNSMIKGYAQLG 122
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A ++M G+ P+ + ++ ACA + A GK H V R +++D +AT
Sbjct: 123 HIATAVDFLKRMDLDGIQPNTMTLLTLFDACATIPAPAEGKLVHASVDRG-VDRDGPIAT 181
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL+ MY + G AR FD+ PD D A W AMI+ Y NG +A+E+F M +
Sbjct: 182 ALVYMYGRSGGLDAARAIFDRL---PDRDVAPWTAMIASYAHNGHGAAALELFQRMALDG 238
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
PN+ +F +L C HAG +D + +F D+ ++P EH+ C+VDLL R GRL EA
Sbjct: 239 SPPNAVTFNTIL--CAHAGLMDPSWDLFVSSARDYSIRPAMEHYVCIVDLLARVGRLSEA 296
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
R+LI +P P + +LLGAC DLGE A L ++ EN +P+V+LS++Y+
Sbjct: 297 RDLIARMPFHPDPVAWTALLGACKLQEERDLGEFAAAMLVQLNSENDSPYVVLSHLYSKD 356
Query: 366 G 366
G
Sbjct: 357 G 357
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 45/264 (17%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA-DLNKDESMATALISMYMKC- 196
M G P+ SVL ACA ++K G++ H V + +L++D + TA+++ Y KC
Sbjct: 1 MDIEGTTPTKVAFLSVLEACAATGSVKEGRQIHAEVQSSLELSRDAKIQTAIVNFYGKCG 60
Query: 197 ------------------------------GQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
GQ AR FD E + + WN+MI GY
Sbjct: 61 LLVEARSMLDAAEDRCIVSTNAMISAYVKHGQMDRARELFDSLE--SPNVSTWNSMIKGY 118
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G +AV+ M + ++PN+ + + + AC + + +D G+
Sbjct: 119 AQLGHIATAVDFLKRMDLDGIQPNTMTLLTLFDACATIPAPAEGKLVHASVDR--GVDRD 176
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNS-----DLGEEMA 341
+V + GRSG LD AR + LP+ V+ + +++ A + H +L + MA
Sbjct: 177 GPIATALVYMYGRSGGLDAARAIFDRLPDRDVAPWTAMI-ASYAHNGHGAAALELFQRMA 235
Query: 342 MKLQEMEPENPTPFVILSNIYAGL 365
+ + P N F + +AGL
Sbjct: 236 L---DGSPPNAVTFNTILCAHAGL 256
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN++T +++ ACA++ G+ VH ++ D I TALV MY + G L A
Sbjct: 140 QPNTMTLLTLFDACATIPAPAEGKLVHA-SVDRGVDRDGPIATALVYMYGRSGGLDAARA 198
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F L R++ W MIA NG A+ELF+ +A +G P+ T+N+++ + G
Sbjct: 199 IFDRLP-DRDVAPWTAMIASYAHNGHGAAALELFQRMALDGSPPNAVTFNTILCAHA--G 255
Query: 128 MRFEAFKLF-EKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ ++ LF + + P+++ C+ +L+ LS E + R + D
Sbjct: 256 LMDPSWDLFVSSARDYSIRPAMEHYVCIVDLLARVGRLS------EARDLIARMPFHPDP 309
Query: 184 SMATALI 190
TAL+
Sbjct: 310 VAWTALL 316
>gi|297796913|ref|XP_002866341.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312176|gb|EFH42600.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 211/391 (53%), Gaps = 37/391 (9%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL--- 72
S++ A +LL +FG+ +H L LK +SD I ++L+DMY K G + A VF +L
Sbjct: 122 SLLKASRNLLDREFGKMIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQ 181
Query: 73 ---------KGSRN----------------------ILTWNTMIAGMMLNGRSEKAMELF 101
G N I+TWN +I+G G EK E+
Sbjct: 182 DLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEIL 241
Query: 102 EGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL 161
E + +G+ PD +W S+ISG +AF F++M + G+ P+ +T++L AC L
Sbjct: 242 ELMCLDGYMPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTL 301
Query: 162 SALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
+ +K GKE HG+ + L + +AL+ MY KCG S A F + K +N+
Sbjct: 302 ANMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT--TVTFNS 359
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI Y +G + AVE+FD M+ K + +F A+L+AC HAG D +F +M +
Sbjct: 360 MIFCYANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFHLMQTKY 419
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEM 340
++P+ EH+ CMVDLLGR+G+L EA E+++ + EP + V+ +LLGAC H N +L
Sbjct: 420 RIEPRLEHYACMVDLLGRAGKLVEAYEMMKTMRMEPDLFVWGALLGACRNHGNMELARIA 479
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDV 371
A +L E+EPEN ++L+++YA +G WE+V
Sbjct: 480 AKRLAELEPENSGNGLLLTSLYADVGSWENV 510
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 43/299 (14%)
Query: 46 TMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA 105
T I LV Y++CG + A VF E+
Sbjct: 51 TRIAAKLVSFYVECGKVLDARKVFDEMP-------------------------------- 78
Query: 106 HEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
K D + W MI ++ G E+ +F +M G+ + V S+L A +L +
Sbjct: 79 ----KRDISGWVVMIGACARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRNLLDRE 134
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
GK H V++ D + ++LI MY K G+ AR+ FD ++ D +NAMISG
Sbjct: 135 FGKMIHCLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFD--DLGEQDLVVFNAMISG 192
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
Y N + + A+ + M+ +KP+ ++ A++S H G+ +K +I +M D G P
Sbjct: 193 YANNSQADEALNLVKDMKLLGIKPDIITWNALISGFSHMGNEEKVSEILELMCLD-GYMP 251
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEM 340
+ ++ L + + ++A + +++ P + +LL AC N G+E+
Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATITTLLPACTTLANMKHGKEI 310
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 1/133 (0%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T +++ AC +L ++ G+++HG ++ + + +AL+DMY KCG + A +
Sbjct: 286 PNSATITTLLPACTTLANMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMIL 345
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F++ + +T+N+MI +G S+KA+ELF+ + G K D T+ ++++ S G+
Sbjct: 346 FRKTP-KKTTVTFNSMIFCYANHGLSDKAVELFDQMEATGEKLDHLTFTAILTACSHAGL 404
Query: 129 RFEAFKLFEKMQS 141
LF MQ+
Sbjct: 405 TDLGQNLFHLMQT 417
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G H H++ + + + +A L+S Y++CG+ AR+ FD E+ D + W MI
Sbjct: 35 GIVLHAHLVTSGIARLTRIAAKLVSFYVECGKVLDARKVFD--EMPKRDISGWVVMIGAC 92
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG---- 282
R G Y+ +++IF M +E +K + ++L A + ++D +FG
Sbjct: 93 ARYGYYQESLDIFREMNKEGLKLDVFIVPSLLKASRN------------LLDREFGKMIH 140
Query: 283 ---LKPKQEH----FGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD 335
LK E ++D+ + G + AR++ +L E + V+++++ + +D
Sbjct: 141 CLVLKCSFESDAFIVSSLIDMYSKFGEVVNARKVFDDLGEQDLVVFNAMISGYANNSQAD 200
Query: 336 LGEEMA--MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
+ MKL ++P+ T ++S ++ +G E V I +++
Sbjct: 201 EALNLVKDMKLLGIKPDIITWNALISG-FSHMGNEEKVSEILELM 244
>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Vitis vinifera]
Length = 868
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 214/387 (55%), Gaps = 11/387 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPC 64
P+S+T +++I A++ ++ ++ H +++ ++ + +G ++D Y KCG +
Sbjct: 448 RPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKY 507
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A N+F L RN++T N+MI+G + + + A +F ++ + D TWN M+ ++
Sbjct: 508 AVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMS----ETDLTTWNLMVRVYA 563
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
+ +A LF ++Q GM P + + S+L ACA ++++ + ++ HG+VIRA N D
Sbjct: 564 ENDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVR 622
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ A I MY KCG A + F D + AM+ G+ +G E A+ IF M +
Sbjct: 623 LNGAFIDMYSKCGSVFGAYKLF--LSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLE 680
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
VKP+ AVL AC HAG VD+ +IF ++ G +P E + C+VDLL R GR+
Sbjct: 681 LGVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIK 740
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A + +P E +++ +LLGAC H +LG +A L ++E +N +V++SN+YA
Sbjct: 741 DAYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYA 800
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V IR+++ R+L K G S
Sbjct: 801 ADARWDGVMEIRRLMRTRELKKPAGCS 827
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 172/376 (45%), Gaps = 56/376 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC--A 65
+PNSVT V+ CA L G+ VH +K +S T+ G AL+ MY KCG L C A
Sbjct: 139 KPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCG-LVCSDA 196
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ F ++ FK D +WN++I+GFS+
Sbjct: 197 YAAFNRIE-----------------------------------FK-DVVSWNAVIAGFSE 220
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL---SALKLGKETHGHVI-RADLNK 181
EAFKLF M + P+ + S+L CA L + + GKE H HV+ R +L +
Sbjct: 221 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 280
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-D 240
D S+ +L+S Y++ GQ A F +K D WNA+I+GY NGE+ A+E+F +
Sbjct: 281 DVSVINSLMSFYLRIGQMEKAEFLFRN--MKSRDLVSWNAIIAGYASNGEWLKALELFSE 338
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ E +KP+S + V+VL AC H ++ A I + GL+ ++ +
Sbjct: 339 FISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKC 398
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGA-----CWCHLNSDLGEEMAMKLQEMEPENPTPF 355
A + + + ++++L A C HL + L M + + P++ T
Sbjct: 399 NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLL---HWMLREGIRPDSITIL 455
Query: 356 VILSNIYAGLGRWEDV 371
I+ YA + R + V
Sbjct: 456 TII-QYYAAVSRVKKV 470
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 42/258 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +++ +C ++ ++FG +HG LK+ S + L+++Y K G L +
Sbjct: 36 KPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNK 95
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL- 126
+F E+ + DP WN ++SG +
Sbjct: 96 LFGEMD------------------------------------QRDPVIWNIVLSGLAGFQ 119
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E +LF M P+ + VL CA L GK H +VI++ L
Sbjct: 120 SHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLA 178
Query: 186 ATALISMYMKCGQP-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
ALISMY KCG S A F++ E K D WNA+I+G+ N E A ++F M +
Sbjct: 179 GNALISMYAKCGLVCSDAYAAFNRIEFK--DVVSWNAVIAGFSENKFTEEAFKLFHAMLK 236
Query: 245 EKVKPNSASFVAVLSACG 262
++PN A+ ++L C
Sbjct: 237 GPIQPNYATIASILPVCA 254
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 154/369 (41%), Gaps = 58/369 (15%)
Query: 8 EPNSVTFISVISACASL---LYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLP 63
+PN T S++ CASL ++G++VH L+ +E D + +L+ YL+ G +
Sbjct: 240 QPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQME 299
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +F+ +K D +WN++I+G+
Sbjct: 300 KAEFLFRNMKSR------------------------------------DLVSWNAIIAGY 323
Query: 124 SQLGMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIR-ADLNK 181
+ G +A +LF + S + P + SVL ACA + L++ K HG++IR L +
Sbjct: 324 ASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLRE 383
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D S+ AL+S Y KC A + F I D WNA++ + +G V +
Sbjct: 384 DTSVGNALLSFYAKCNYTQAALQTF--LMISRKDLISWNAILDAFTESGCETHLVNLLHW 441
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVD 295
M +E ++P+S + + ++ V K + F ++ D G M+D
Sbjct: 442 MLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNG----MLD 497
Query: 296 LLGRSGRLDEARELIRELPEP-TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ G + A + L E V +S++ ++NS ++ M + T
Sbjct: 498 AYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISG---YVNSSSHDDAYAIFNTMSETDLTT 554
Query: 355 FVILSNIYA 363
+ ++ +YA
Sbjct: 555 WNLMVRVYA 563
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 14/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT +S++ ACA + + RQ HG ++ +D + A +DMY KCG + A+
Sbjct: 584 KPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYK 642
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++++ + M+ G ++G E+A+ +F + G KPD +++ S G
Sbjct: 643 LFLS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 701
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K+F ++ G P+++ CV +L+ + K+ + V R + +
Sbjct: 702 LVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRI------KDAYTFVTRMPIEANA 755
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ L+ + R D F+I+ D+ + M + Y + ++ +EI LM
Sbjct: 756 NIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLM 815
Query: 243 Q-QEKVKPNSASFVAV 257
+ +E KP S++ V
Sbjct: 816 RTRELKKPAGCSWIEV 831
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 131 EAFKLF-EKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF E+++ S G P+ + + ++L +C +SA++ G HG+ ++ +S+
Sbjct: 20 EALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKG 79
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV-EIFDLMQQ-EK 246
L+++Y K G + + F E+ DP WN ++SG +E+ V +F M +
Sbjct: 80 LLNLYAKSGALDYCNKLFG--EMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE 137
Query: 247 VKPNSASFVAVLSACG 262
KPNS + VL C
Sbjct: 138 AKPNSVTIAIVLPVCA 153
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 216/415 (52%), Gaps = 38/415 (9%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
VT +++SA A L+ G++V ++ SD ++ + VDMY CG + A VF
Sbjct: 374 VTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDS 433
Query: 72 LKGSR----------------------------------NILTWNTMIAGMMLNGRSEKA 97
+ N +TWN +I + NG+ +A
Sbjct: 434 VLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEA 493
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
E+F + G P+ +W +M++G Q G EA KMQ +G+ P+ +T LSA
Sbjct: 494 KEIFSQMQSSGIFPNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 553
Query: 158 CADLSALKLGKETHGHVIRADLNKDESMA-TALISMYMKCGQPSWARRFFDQFEIKPDDP 216
C++L++L G+ HG++IR + + T+L+ MY KCG + A F + ++ D P
Sbjct: 554 CSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVF-RSKLCSDLP 612
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM 276
+NAMIS Y NG + A+ + ++ +KP++ +F ++LSAC HAG V +A++IFT
Sbjct: 613 -LYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTD 671
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSD 335
M G+KP EH+G MVD+L +G D+A LI E+P + + SL+ +C ++
Sbjct: 672 MVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTE 731
Query: 336 LGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L + ++ L E EPEN +V +SN YA G W++V + R+M+ ++L K PG S
Sbjct: 732 LMDFLSRHLLETEPENSGNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGCS 786
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 162/366 (44%), Gaps = 54/366 (14%)
Query: 3 ECLSDE--PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
E L +E P++ +V AC +L + +FGR VHG +K + ++L DMY KCG
Sbjct: 161 EMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCG 220
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A VF E+ RN++ WN +++
Sbjct: 221 VLDDARKVFDEIP-ERNVVAWN-----------------------------------ALM 244
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ Q GM EA +L M+ G+ P+ V++ LSA A++ ++ GK++H I L
Sbjct: 245 VGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLE 304
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + T+ ++ Y K G +A FD+ K D WN +ISGY + G E A+ +
Sbjct: 305 LDNILGTSNLNFYCKVGLIEYAEMIFDRMIEK--DVVTWNLLISGYVQQGLVEDAIHMCQ 362
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVD--KALQIFTM---MDDDFGLKPKQEHFGCMVD 295
LM+ E +K + + ++SA ++ K +Q + + D L VD
Sbjct: 363 LMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTA------VD 416
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ G + +A+++ + + ++++LL + S L E EM+ E+ P
Sbjct: 417 MYANCGSIIDAKKVFDSVLAKDLILWNTLLSV---YAESGLSGEAFRLFYEMQLESVPPN 473
Query: 356 VILSNI 361
I N+
Sbjct: 474 AITWNL 479
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 174/393 (44%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP VT + +SA A++ ++ G+Q H + + + D ++GT+ ++ Y K G + A
Sbjct: 269 EPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEM 328
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++TWN +I+G + G E A+ + + + E K D T
Sbjct: 329 IFDRMI-EKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVT------------ 375
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+++++SA A LKLGKE + IR D +A+
Sbjct: 376 -----------------------LSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLAS 412
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+ MY CG A++ FD K D WN ++S Y +G A +F MQ E V
Sbjct: 413 TAVDMYANCGSIIDAKKVFDSVLAK--DLILWNTLLSVYAESGLSGEAFRLFYEMQLESV 470
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN+ ++ ++ + G V++A +IF+ M G+ P + M++ L ++G +EA
Sbjct: 471 PPNAITWNLIILSFLRNGQVNEAKEIFSQMQSS-GIFPNLVSWTTMMNGLVQNGCSEEAI 529
Query: 308 ELIRELPE----PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFV--ILSNI 361
+R++ E P L AC + G + + + + + + L ++
Sbjct: 530 LFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDM 589
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISAGIT 394
YA G D+ + + + + LP +A I+
Sbjct: 590 YAKCG---DINKAEMVFRSKLCSDLPLYNAMIS 619
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 13/248 (5%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDT-MIGTALVDMYLKCGCLPCAHN 67
PN+ + +SAC++L L FGR VHG ++ ++ S + +I T+LVDMY KCG + A
Sbjct: 542 PNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEM 601
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF+ K ++ +N MI+ LNG ++A+ L L G KPD T+ S++S + G
Sbjct: 602 VFRS-KLCSDLPLYNAMISAYALNGNVKEAIALCRRLEDTGIKPDNITFTSLLSACNHAG 660
Query: 128 MRFEAFKLFEKMQST-GMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+A ++F M S G+ P L+ V + SA AL+L +E ++D
Sbjct: 661 DVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASAGETDKALRLIEEMP---YKSDARMI 717
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+S+ A +M K + R E +P++ + + + Y G ++ V+ ++M
Sbjct: 718 QSL-VASCNMKHKTELMDFLSRHL--LETEPENSGNYVTISNAYAVEGSWDEVVKTREMM 774
Query: 243 QQEKVKPN 250
+ +++K +
Sbjct: 775 KAKRLKKS 782
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 55/363 (15%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEK--QSDTMIGTALVDMYLKCGCLPCAHNVFQELKG 74
++ C L G+Q+H LK + I T LV Y KC + +F +L+
Sbjct: 74 ILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLR- 132
Query: 75 SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFK 134
RN+ +W +I G K ++G+ EA
Sbjct: 133 VRNVYSWAAII----------------------GVK-------------CRIGLCEEALM 157
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
F +M + P V +V AC L + G+ HG+V+++ L+ +A++L MY
Sbjct: 158 GFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYG 217
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
KCG AR+ FD EI + WNA++ GY +NG E A+ + M++E ++P +
Sbjct: 218 KCGVLDDARKVFD--EIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTV 275
Query: 255 VAVLSACGH-----AGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
LSA + G A+ I ++ D L +F C V G ++ A +
Sbjct: 276 STCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKV------GLIEYAEMI 329
Query: 310 IRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN-PTPFVILSNIYAGLGRW 368
+ E V ++ L+ ++ L E+ Q M EN V LS + + R
Sbjct: 330 FDRMIEKDVVTWNLLISG---YVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAART 386
Query: 369 EDV 371
+++
Sbjct: 387 QNL 389
>gi|297607983|ref|NP_001061009.2| Os08g0153600 [Oryza sativa Japonica Group]
gi|255678154|dbj|BAF22923.2| Os08g0153600 [Oryza sativa Japonica Group]
Length = 551
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 197/331 (59%), Gaps = 8/331 (2%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A F+ + + W M++G M G KA+E FE + +WN++++
Sbjct: 158 MSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL----VSWNAVVA 213
Query: 122 GFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ + +A +LF M + + P+ ++SVL C++LSAL GK+ H ++ L+
Sbjct: 214 GYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLS 273
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ ++ T+L+SMY KCG S A + F + + D WNAMISGY ++G+ + A+ +F+
Sbjct: 274 RNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR--DVVAWNAMISGYAQHGDGKEAINLFE 331
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ E V+PN +FVAVL+AC H G D ++ F M + +G++P+ +H+ CMVDLL R+
Sbjct: 332 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 391
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G+L+ A +LIR +P EP S Y +LL AC + N + E A KL E +P++ +V L+
Sbjct: 392 GKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLA 451
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYAG +W+DV R+R+ + D + K PG S
Sbjct: 452 NIYAGANQWDDVSRVRRWMKDNAVVKTPGYS 482
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T SV+ C++L L FG+Q+H +K+ + +GT+LV MY KCG L A
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ +R+++ WN MI+G +G ++A+ LFE + EG +P+ T+ ++++ G
Sbjct: 298 LFGEMH-TRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 128 MRFEAFKLFEKMQ 140
+ + FE MQ
Sbjct: 357 LCDFGIRCFEGMQ 369
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN-GEYESAVEIFDLM 242
S++T ++ ++ G + A F K A +N +++GY R G A +FD +
Sbjct: 18 SLSTVAVAAAVRRGDLTGAEEAFASTPRKT--TATYNCLLAGYARALGRLADARHLFDRI 75
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRS 300
P++ S+ +LS +G D A ++F M P ++ + MV L +S
Sbjct: 76 PT----PDAVSYNTLLSCHFASGDADGARRLFASM-------PVRDVVSWNTMVSGLSKS 124
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
G ++EA+ + +P +++++ C + EE
Sbjct: 125 GAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEE 163
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 101/236 (42%), Gaps = 32/236 (13%)
Query: 105 AHEGFKPDP----ATWNSMISGFSQ-LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACA 159
A E F P AT+N +++G+++ LG +A LF+++ + V S + S A
Sbjct: 36 AEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPTPDAV-SYNTLLSCHFASG 94
Query: 160 DLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFW 219
D + + + +D ++S K G A+ F ++ + W
Sbjct: 95 DADGAR-------RLFASMPVRDVVSWNTMVSGLSKSGAVEEAKAVFLAMPVR--NSVSW 145
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
NAM+SG+ + + +A E F + K ++ + A++S G+V KA++ F M
Sbjct: 146 NAMVSGFACSRDMSAAEEWF---RNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAM-- 200
Query: 280 DFGLKPKQE--HFGCMVDLLGRSGRLDEA----RELIRELP-EPTVSVYHSLLGAC 328
P + + +V ++ D+A R ++RE +P S S+L C
Sbjct: 201 -----PVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGC 251
>gi|224088569|ref|XP_002308477.1| predicted protein [Populus trichocarpa]
gi|222854453|gb|EEE92000.1| predicted protein [Populus trichocarpa]
Length = 504
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/389 (34%), Positives = 215/389 (55%), Gaps = 12/389 (3%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ PN TF +VI + SL L GRQ +K+ +G+A++D Y K G +
Sbjct: 87 LNVTPNEFTFGTVIHSSTSLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGSIQE 146
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A F++++ NI+++ +I G + GR E+A ELF+ + TWN+MI GFS
Sbjct: 147 AQRAFEDIQHP-NIVSYTALIHGYLKKGRFEEAFELFKQMPERNI----VTWNAMIGGFS 201
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q+G EA LF +M G+VP + A A+++AL++G+ H I+
Sbjct: 202 QMGQNEEAVNLFVEMIREGLVPCQYTFPCAIIAAANIAALEMGRSFHACAIKTMGEFSVF 261
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ +LIS Y KCG + R F +E+ WNA+I G+ +NG E+AV+ ++ M+
Sbjct: 262 VGNSLISFYAKCGSMEDSLRLF--YELPERTIVSWNAVICGFAQNGRGENAVDFYERMRN 319
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFT--MMDDDFGLKPKQEHFGCMVDLLGRSGR 302
++P+S + + +L AC HAG VDK F ++ LKPK H+ CMVDLL R G
Sbjct: 320 TGLRPDSVTLLGLLWACNHAGLVDKGYSYFNRARLEHPSLLKPK--HYACMVDLLSRCGC 377
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
EA+E +R+LP P V + +LLG C H N++LG + +++P++ + +++LSN
Sbjct: 378 FKEAQEFLRDLPFNPGVGFWKALLGGCKIHSNTELGALAGRNILDLDPKDASSYIMLSNA 437
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ GRW+D IRQ I+ R L ++P S
Sbjct: 438 HSAAGRWQDASVIRQEIHARGLKRIPASS 466
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
S A+++F+ + D + ++I F++L EA +LF +M + P+ +
Sbjct: 43 SRNALQVFDTIP----DLDVVSATTIIGQFARLHQYREAIQLFSRMLFLNVTPNEFTFGT 98
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
V+ + L L LG++ ++ LN + +A++ Y K G A+R F+ +I+
Sbjct: 99 VIHSSTSLGDLNLGRQFQACAMKMGLNYMVFVGSAVLDSYAKLGSIQEAQRAFE--DIQH 156
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ + A+I GY + G +E A E+F M + N ++ A++ G ++A+ +
Sbjct: 157 PNIVSYTALIHGYLKKGRFEEAFELFKQMPER----NIVTWNAMIGGFSQMGQNEEAVNL 212
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL----IRELPEPTVSVYHSLL 325
F M + GL P Q F C + L+ R I+ + E +V V +SL+
Sbjct: 213 FVEMIRE-GLVPCQYTFPCAIIAAANIAALEMGRSFHACAIKTMGEFSVFVGNSLI 267
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 202/385 (52%), Gaps = 40/385 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P +T S+I A + + L+ G+ +HG L+ D I +L+D Y KCG + A
Sbjct: 305 KPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAET 364
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F+ + K + +WN MISG +G
Sbjct: 365 IFRTIS------------------------------------KNEVVSWNVMISGHVMVG 388
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A +++ M+ + P +S LSAC+ L+AL G+E H +I L +E +
Sbjct: 389 NHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMG 448
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG AR+ F Q + D W +MI YG +G+ A+ +FD MQ+ V
Sbjct: 449 ALLDMYAKCGDVDEARKLFHQ--LPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNV 506
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+ +S +F+AVLSAC HAG VD+ F M + +KP EH+ C++DLLGR+GRL EA
Sbjct: 507 RADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAY 566
Query: 308 ELIRELPEPT--VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
E+++ E + + +L AC H N LG ++ L E++P++P+ +++LSN+YA +
Sbjct: 567 EILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASV 626
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
+W++V ++R+ + + L K PG S
Sbjct: 627 NKWDEVRKVRRKMKELGLKKSPGCS 651
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 166/331 (50%), Gaps = 40/331 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
MKE L EPNSVTF V+S+C LL L+ G++VH ++ D + +ALVDMY KCG
Sbjct: 198 MKE-LGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALVDMYGKCG 256
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
CL A VF+++ + + TWN+MI
Sbjct: 257 CLEMAKEVFEKIP------------------------------------RKNAITWNAMI 280
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+G+S G +L +M G P+L +TS++ A + L+ GK HG+++R ++
Sbjct: 281 TGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRID 340
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D + +LI Y KCG S A F I ++ WN MISG+ G + A+ I+D
Sbjct: 341 VDIFIDVSLIDFYFKCGYVSSAETIFRT--ISKNEVVSWNVMISGHVMVGNHIQALHIYD 398
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M++ VKP++ +F + LSAC +DK ++ + + L+ + G ++D+ +
Sbjct: 399 NMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINH-KLEANEIVMGALLDMYAKC 457
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCH 331
G +DEAR+L +LP+ + + S++ A H
Sbjct: 458 GDVDEARKLFHQLPKRDLVSWTSMIFAYGSH 488
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 161/362 (44%), Gaps = 52/362 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT +S + C S L+ G+ +H QS+ ++ +L+ Y C A VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
Q D + WN+++S ++
Sbjct: 62 QT-----------------------------------NDCPLDVSLWNALLSAYTNNFRF 86
Query: 130 FEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA +LF+++ V P VL AC L + G+ H H+++ L D + ++
Sbjct: 87 VEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSS 146
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++MY KC Q A + FD+F + D WNA+IS Y ++G+ E A++ FD M++ +
Sbjct: 147 LMNMYAKCDQFVDAIKLFDEFPQR--DVGCWNAVISCYFKDGKAEMALKTFDKMKELGFE 204
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
PNS +F V+S+C ++++ ++ ++ D F L +VD+ G+ G
Sbjct: 205 PNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSA-------LVDMYGKCGC 257
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
L+ A+E+ ++P +++++ +S E+ M++ + E PT + S IY
Sbjct: 258 LEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND-EGTKPTLMTLTSIIY 316
Query: 363 AG 364
A
Sbjct: 317 AS 318
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 38/253 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ T+ V+ AC L + +GR++H LK D +G++L++MY KC A
Sbjct: 103 RPDFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIK 162
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E R++ WN +I+ +G++E A++ F+ + GF+P+ T+
Sbjct: 163 LFDEFP-QRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTF----------- 210
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
T V+S+C L L+ GKE H +I + D + +
Sbjct: 211 ------------------------TVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLS 246
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ MY KCG A+ F++ I + WNAMI+GY G+ S +E+ M E
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEK--IPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGT 304
Query: 248 KPNSASFVAVLSA 260
KP + +++ A
Sbjct: 305 KPTLMTLTSIIYA 317
>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 613
Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 197/331 (59%), Gaps = 8/331 (2%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A F+ + + W M++G M G KA+E FE + +WN++++
Sbjct: 158 MSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL----VSWNAVVA 213
Query: 122 GFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ + +A +LF M + + P+ ++SVL C++LSAL GK+ H ++ L+
Sbjct: 214 GYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLS 273
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ ++ T+L+SMY KCG S A + F + + D WNAMISGY ++G+ + A+ +F+
Sbjct: 274 RNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR--DVVAWNAMISGYAQHGDGKEAINLFE 331
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ E V+PN +FVAVL+AC H G D ++ F M + +G++P+ +H+ CMVDLL R+
Sbjct: 332 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 391
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G+L+ A +LIR +P EP S Y +LL AC + N + E A KL E +P++ +V L+
Sbjct: 392 GKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLA 451
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYAG +W+DV R+R+ + D + K PG S
Sbjct: 452 NIYAGANQWDDVSRVRRWMKDNAVVKTPGYS 482
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T SV+ C++L L FG+Q+H +K+ + +GT+LV MY KCG L A
Sbjct: 238 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 297
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ +R+++ WN MI+G +G ++A+ LFE + EG +P+ T+ ++++ G
Sbjct: 298 LFGEMH-TRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 356
Query: 128 MRFEAFKLFEKMQ 140
+ + FE MQ
Sbjct: 357 LCDFGIRCFEGMQ 369
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN-GEYESAVEIFDLM 242
S++T ++ ++ G + A F K A +N +++GY R G A +FD +
Sbjct: 18 SLSTVAVAAAVRRGDLTGAEEAFASTPRKT--TATYNCLLAGYARALGRLADARHLFDRI 75
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRS 300
P++ S+ +LS +G D A ++F M P ++ + MV L +S
Sbjct: 76 PT----PDAVSYNTLLSCHFASGDADGARRLFASM-------PVRDVVSWNTMVSGLSKS 124
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
G ++EA+ + +P +++++ C + EE
Sbjct: 125 GAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEE 163
>gi|224056897|ref|XP_002299078.1| predicted protein [Populus trichocarpa]
gi|222846336|gb|EEE83883.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/382 (34%), Positives = 207/382 (54%), Gaps = 8/382 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++ T+ V+ AC+ L G+QVH +K DT I ++L+ MY G + A V
Sbjct: 90 DNFTYTFVLKACSHLKAPFEGKQVHCQIIKAGIVPDTHIHSSLIHMYTNSGSIDDAERVL 149
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E N L N MI+G + GR +KA ++F+ +A D A+W+++I+G+++ GM
Sbjct: 150 GEFS-EENTLAKNAMISGYLTEGRVDKARKMFDDMA----AKDAASWSALITGYTKNGMH 204
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF+ M + ++P+ + S+LSAC L L G+ H ++ + + + TAL
Sbjct: 205 TEALALFQDMMVSHILPNEAALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTAL 264
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY K G F + + D W MIS + +G ++FD M + ++P
Sbjct: 265 IDMYAKSGSIECGYGLFQKMARR--DVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRP 322
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N FVA+LSAC HAG V++ Q F+ M+ FG+KP EH+GCMVDLLGR+G L +A +L
Sbjct: 323 NKVIFVAILSACSHAGCVEEGRQYFSQMEHGFGIKPSIEHYGCMVDLLGRAGLLADAEQL 382
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
I +P +P ++ SLLGAC H + G L E+EP + + ++A G
Sbjct: 383 ILSMPKQPNSIIWGSLLGACRTHNDLKRGTWAFENLMELEPTSGDRHKLAGLMFANAGEK 442
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
E+ +IR+MI+++++ G S
Sbjct: 443 EEAAKIRKMIHEKEMVTTCGSS 464
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +S++SAC L L GR +H K T + TAL+DMY K G + C + +
Sbjct: 221 PNEAALVSLLSACGQLGTLHQGRWIHAYIDKTRVLMSTKLTTALIDMYAKSGSIECGYGL 280
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ++ R+++TW MI+ ++G + K +LF+ + +G +P+ + +++S S G
Sbjct: 281 FQKM-ARRDVVTWGVMISAFAIHGHASKCFQLFDEMLADGIRPNKVIFVAILSACSHAGC 339
Query: 129 RFEAFKLFEKMQST-GMVPSLK 149
E + F +M+ G+ PS++
Sbjct: 340 VEEGRQYFSQMEHGFGIKPSIE 361
>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
Length = 662
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 197/331 (59%), Gaps = 8/331 (2%)
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
+ A F+ + + W M++G M G KA+E FE + +WN++++
Sbjct: 207 MSAAEEWFRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNL----VSWNAVVA 262
Query: 122 GFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
G+ + +A +LF M + + P+ ++SVL C++LSAL GK+ H ++ L+
Sbjct: 263 GYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLS 322
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ ++ T+L+SMY KCG S A + F + + D WNAMISGY ++G+ + A+ +F+
Sbjct: 323 RNLTVGTSLVSMYCKCGDLSSACKLFGEMHTR--DVVAWNAMISGYAQHGDGKEAINLFE 380
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M+ E V+PN +FVAVL+AC H G D ++ F M + +G++P+ +H+ CMVDLL R+
Sbjct: 381 RMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRA 440
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G+L+ A +LIR +P EP S Y +LL AC + N + E A KL E +P++ +V L+
Sbjct: 441 GKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLA 500
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
NIYAG +W+DV R+R+ + D + K PG S
Sbjct: 501 NIYAGANQWDDVSRVRRWMKDNAVVKTPGYS 531
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T SV+ C++L L FG+Q+H +K+ + +GT+LV MY KCG L A
Sbjct: 287 QPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACK 346
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F E+ +R+++ WN MI+G +G ++A+ LFE + EG +P+ T+ ++++ G
Sbjct: 347 LFGEMH-TRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTG 405
Query: 128 MRFEAFKLFEKMQ 140
+ + FE MQ
Sbjct: 406 LCDFGIRCFEGMQ 418
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN-GEYESAVEIFDLM 242
S++T ++ ++ G + A F K A +N +++GY R G A +FD +
Sbjct: 67 SLSTVAVAAAVRRGDLTGAEEAFASTPRKTT--ATYNCLLAGYARALGRLADARHLFDRI 124
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRS 300
P++ S+ +LS +G D A ++F M P ++ + MV L +S
Sbjct: 125 PT----PDAVSYNTLLSCHFASGDADGARRLFASM-------PVRDVVSWNTMVSGLSKS 173
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
G ++EA+ + +P +++++ C + EE
Sbjct: 174 GAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEE 212
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 207/392 (52%), Gaps = 29/392 (7%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+E NS T V+ AC +HG +K D + AL+DMY + G
Sbjct: 391 MEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLG 450
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
+ A +F +++ R+++TWNT+I G + + R E A+ +
Sbjct: 451 KIDIAKRIFGKME-DRDLVTWNTIITGYVFSERHEDALLMLHK----------------- 492
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
M+ K E+ + P+ + ++L +CA LSAL GKE H + I+ +L
Sbjct: 493 -------MQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLA 545
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D ++ +AL+ MY KCG +R+ FDQ I+ + WN ++ YG +G + A+++
Sbjct: 546 TDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR--NVITWNVIVMAYGMHGNSQDAIDMLR 603
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+M + VKPN +F++V +AC H+G V++ L+IF M D+G++P +H+ C+VDLLGR+
Sbjct: 604 MMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRA 663
Query: 301 GRLDEARELIRELPE--PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
GR+ EA +LI +P + SLLGAC H N ++GE A L ++EP + +V+L
Sbjct: 664 GRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLL 723
Query: 359 SNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+NIY+ G W +R+ + + + K PG S
Sbjct: 724 ANIYSSAGLWYKATEVRRNMKAQGVRKEPGCS 755
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 53/355 (14%)
Query: 3 ECLSDE---PNSVTFISVISACASLLY---LQFGRQVHGLTLKIEKQSDTMIGTALVDMY 56
C+ DE P+S T +SV AC++ L G+QVH L+ + + ++ I LV MY
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR-KGELNSFIINTLVAMY 242
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
K G L + + L GS FEG D TW
Sbjct: 243 GKMGKLASS----KVLLGS-------------------------FEG-------RDLVTW 266
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N+++S Q EA + +M G+ P ++SVL AC+ L L+ GKE H + ++
Sbjct: 267 NTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALK 326
Query: 177 -ADLNKDESMATALISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISGYGRNGEYES 234
L+++ + +AL+ MY C Q R FD F+ K WNAMI+GY +N E
Sbjct: 327 NGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRK---IGLWNAMITGYAQNEYDEE 383
Query: 235 AVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A+ +F M++ + NS + V+ AC +G K I + GL + +
Sbjct: 384 ALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKR-GLDRDRFVQNAL 442
Query: 294 VDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+D+ R G++D A+ + ++ + + +++++ ++ S+ E+ + L +M+
Sbjct: 443 MDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITG---YVFSERHEDALLMLHKMQ 494
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 117/264 (44%), Gaps = 45/264 (17%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLP 63
L +P++ F +++ A A L + G+Q+H K D++ + LV++Y KCG
Sbjct: 87 LGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFG 146
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
+ VF + RN ++WN++I+ + + E A+E F + E +P T
Sbjct: 147 AVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFT-------- 197
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL---SALKLGKETHGHVIR-ADL 179
+ SV AC++ L +GK+ H + +R +L
Sbjct: 198 ---------------------------LVSVALACSNFPMPEGLLMGKQVHAYGLRKGEL 230
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF 239
N + L++MY K G+ + ++ FE + D WN ++S +N ++ A+E
Sbjct: 231 N--SFIINTLVAMYGKMGKLASSKVLLGSFEGR--DLVTWNTVLSSLCQNEQFLEALEYL 286
Query: 240 DLMQQEKVKPNSASFVAVLSACGH 263
M E V+P+ + +VL AC H
Sbjct: 287 REMVLEGVEPDGFTISSVLPACSH 310
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHG 172
P W ++ + + EA + M G+ P ++L A ADL + LGK+ H
Sbjct: 58 PEWWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHA 117
Query: 173 HVIRADLNKDE-SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
HV + D ++A L+++Y KCG + FD+ I + WN++IS +
Sbjct: 118 HVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEK 175
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGH 263
+E A+E F M E V+P+S + V+V AC +
Sbjct: 176 WEMALEAFRCMLDEDVEPSSFTLVSVALACSN 207
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 224/418 (53%), Gaps = 43/418 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF ++ C L + + G VHG LK + ++ + L+ + CG L A +
Sbjct: 110 KPDKFTFSFLLKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARS 169
Query: 68 VFQEL-----------------KGS-------------RNILTWNTMIAGMMLNGRSEKA 97
+F +L +G +++++WN MI G + NG E A
Sbjct: 170 IFYDLPERSVVSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENA 229
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
LF+ E + D TWN+MI+G+ G + +A ++FE+M++ G P + S+LSA
Sbjct: 230 RTLFD----EAPEKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSA 285
Query: 158 CADLSALKLGKETH---GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
CADL L++G++ H + R DL+ + AL+ MY KCG A + F + ++
Sbjct: 286 CADLGDLQVGRKLHCSISEMTRGDLSV--LLGNALVDMYAKCGSIEIALQVFKK--MREK 341
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPNSASFVAVLSACGHAGHVDKALQI 273
D WN++I G +G E ++++F MQ K +KPN +FV V+ AC HAG+V++ +
Sbjct: 342 DVTTWNSVIGGLAFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRY 401
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHL 332
F +M + + ++P H GCMVDLLGR+G L EA ELI ++ EP ++ +LLGAC H
Sbjct: 402 FKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHG 461
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N +LG +L ++ + +V+LSNIYA G W+ +R++++D + K G S
Sbjct: 462 NVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRS 519
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 38/335 (11%)
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSM 119
G + AH VF ++ +I WNTM+ G + K + L+ + + G KPD T++ +
Sbjct: 61 GAINYAHQVFAQIT-EPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFL 119
Query: 120 ISGFSQLGMRFEAFKLFEKMQSTGM-VPSLKCVTSVL--SACADL-------------SA 163
+ G ++L R F + K+ G V S T + S C DL S
Sbjct: 120 LKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSV 179
Query: 164 LKLGKETHGHVIRADLN-----------KDESMATALISMYMKCGQPSWARRFFDQFEIK 212
+ T G+ R +L KD +I+ Y+K G+ AR FD E
Sbjct: 180 VSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFD--EAP 237
Query: 213 PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG--HVDKA 270
D WN MI+GY GE A+E+F+ M+ P+ + +++LSAC G V +
Sbjct: 238 EKDVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRK 297
Query: 271 LQ--IFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
L I M D + +VD+ + G ++ A ++ +++ E V+ ++S++G
Sbjct: 298 LHCSISEMTRGDLSVLLGN----ALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGL 353
Query: 329 WCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
H +++ ++ ++Q ++ P + I A
Sbjct: 354 AFHGHAEESIKLFAEMQALKNIKPNEITFVGVIVA 388
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 196/384 (51%), Gaps = 38/384 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T +S++SACA L L G HG +K +S+ + AL+DMY KCG L A N
Sbjct: 527 QPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAEN 586
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F K + D +WN MI+G+ G
Sbjct: 587 LFHLNKHVK-----------------------------------DEVSWNVMIAGYLHNG 611
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA F +M+ + P+L ++L A + LS L+ H +IR +
Sbjct: 612 CANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGN 671
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY K GQ S++ + F + E K WNAM+SGY +G+ E A+ +F LMQ+ V
Sbjct: 672 SLIDMYAKSGQLSYSEKCFHEMENK--GTISWNAMLSGYAMHGQGEVALALFSLMQETHV 729
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+S S+++VLSAC HAG + + IF M + L+P EH+ CMVDLLG +G DE
Sbjct: 730 PVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVL 789
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI ++P EP V+ +LLGAC H N LGE L ++EP N +++LS+IYA G
Sbjct: 790 CLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCG 849
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW D R R + D L K PG S
Sbjct: 850 RWIDARRTRSNMTDHGLKKNPGYS 873
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 169/364 (46%), Gaps = 66/364 (18%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N ++ ++ + A L+ G++VH L++ SD ++ T +V MY KCG
Sbjct: 327 NKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCG--------- 377
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
ELK KA E F L+ EG D W++ +S Q G
Sbjct: 378 -ELK----------------------KAKEFF--LSLEG--RDLVVWSAFLSALVQAGYP 410
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA +F++MQ G+ P ++S++SACA++S+ +LGK H +VI+AD+ D S+AT L
Sbjct: 411 GEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTL 470
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+SMY +C +A F++ K D WN +I+G+ + G+ A+E+F +Q V+P
Sbjct: 471 VSMYTRCKSFMYAMTLFNRMHYK--DVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQP 528
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDF------------GLKPKQEHFGCMVDLL 297
+S + V++LSAC ++DD + G++ + ++D+
Sbjct: 529 DSGTMVSLLSACA-------------LLDDLYLGICFHGNIIKNGIESEMHVKVALIDMY 575
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCH---LNSDLGEEMAMKLQEMEPENPTP 354
+ G L A L V +++ A + H N + MKL+ + P T
Sbjct: 576 AKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTF 635
Query: 355 FVIL 358
IL
Sbjct: 636 VTIL 639
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 152/355 (42%), Gaps = 44/355 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ S++SACA + + G+ +H +K + SD + T LV MY +C A
Sbjct: 426 KPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMT 485
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + ++++ WNT+I G G A+E+F L G +PD T
Sbjct: 486 LFNRMH-YKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGT------------ 532
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ S+LSACA L L LG HG++I+ + + +
Sbjct: 533 -----------------------MVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKV 569
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KCG A F D WN MI+GY NG A+ F+ M+ E V
Sbjct: 570 ALIDMYAKCGSLCTAENLF-HLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESV 628
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+PN +FV +L A + + +A+ F G ++D+ +SG+L +
Sbjct: 629 RPNLVTFVTILPAVSYLSILREAMA-FHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSE 687
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGE-EMAMKLQEMEPENPTPFVILSNI 361
+ E+ ++++L H G+ E+A+ L + E P +S I
Sbjct: 688 KCFHEMENKGTISWNAMLSGYAMH-----GQGEVALALFSLMQETHVPVDSVSYI 737
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 177/425 (41%), Gaps = 83/425 (19%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF V+ AC L G +H E + D IGT LVDMY K G L A
Sbjct: 124 EPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARK 183
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLA-HEGFKPDPATW---------- 116
VF ++ G +++ +WN MI+G+ + +A+E+F+ + EG +PD +
Sbjct: 184 VFDKMPG-KDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRL 242
Query: 117 -----------------------NSMISGFSQLGMRFEAFKLFEKM----------QSTG 143
NS+I +S+ G A ++F++M G
Sbjct: 243 EDVDSCKSIHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAG 302
Query: 144 MV----------------------PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
V + V SVL+A + L+ GKE H + ++ +
Sbjct: 303 YVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAA-TETRDLEKGKEVHNYALQLGMTS 361
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D +AT ++SMY KCG+ A+ FF E + D W+A +S + G A+ IF
Sbjct: 362 DIVVATPIVSMYAKCGELKKAKEFFLSLEGR--DLVVWSAFLSALVQAGYPGEALSIFQE 419
Query: 242 MQQEKVKPNSASFVAVLSACGH--AGHVDKALQIFTM---MDDDFGLKPKQEHFGCMVDL 296
MQ E +KP+ +++SAC + + K + + + M D + +V +
Sbjct: 420 MQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATT------LVSM 473
Query: 297 LGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ--EMEPENPTP 354
R A L + V +++L+ + L EM ++LQ ++P++ T
Sbjct: 474 YTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTM 533
Query: 355 FVILS 359
+LS
Sbjct: 534 VSLLS 538
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
P WNS+I +S+L + EA K ++ M G+ P T VL AC G
Sbjct: 89 NPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVA 148
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H + +L D + T L+ MY K G AR+ FD+ K D A WNAMISG ++
Sbjct: 149 IHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGK--DVASWNAMISGLSQS 206
Query: 230 GEYESAVEIFDLMQ-QEKVKPNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPK 286
A+EIF MQ +E V+P+S S + + A VD K++ + + FG+
Sbjct: 207 SNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSN 266
Query: 287 QEHFGCMVDLLGRSGRLDEARELIREL 313
++D+ + G + A ++ ++
Sbjct: 267 S-----LIDMYSKCGEVKLAHQIFDQM 288
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 35/232 (15%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S PN VTF++++ A + L L+ H +++ S T+IG +L+DMY K G L +
Sbjct: 627 SVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYS 686
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F E++ ++ ++WN M++G ++G+ E A+ LF + D ++ S++S
Sbjct: 687 EKCFHEME-NKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRH 745
Query: 126 LGMRFEAFKLFEKMQS--------------------TGMVPSLKCVT------------- 152
G+ E +F+ M G+ + C+
Sbjct: 746 AGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWG 805
Query: 153 SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
++L AC S +KLG+ H+++ + ++ L +Y +CG+ ARR
Sbjct: 806 ALLGACKMHSNVKLGEIALHHLLKLE-PRNAVHYIVLSDIYAQCGRWIDARR 856
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 209/383 (54%), Gaps = 39/383 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+++ S IS CA + ++ G Q+H D I ALV++Y +CG + A +
Sbjct: 444 PDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSS 503
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+E MEL +G+ T N ++SGF+Q G+
Sbjct: 504 FEE--------------------------MELKDGI----------TGNGLVSGFAQSGL 527
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA K+F +M +G+ ++ S LSA A+L+ +K GK+ H VI+ + + + A
Sbjct: 528 HEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNA 587
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LIS+Y KCG A+ F E+ + WN +I+ ++G A+++FD M++E +K
Sbjct: 588 LISLYGKCGSFEDAKMEFS--EMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +F+ VL+AC H G V++ L F M D++G++P+ +H+ C++D+ GR+G+LD A++
Sbjct: 646 PNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKK 705
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I E+P V+ +LL AC H N ++GE A L E+EP + +V+LSN YA +
Sbjct: 706 FIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEK 765
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W + ++R+M+ DR + K PG S
Sbjct: 766 WANRDQVRKMMRDRGVRKEPGRS 788
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 45/355 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T+ ++ C + G Q+H L++K +SD + L+DMY K G L A V
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRV 402
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
+ LK + D +W SMI+G+ Q
Sbjct: 403 LEMLK------------------------------------EKDVVSWTSMIAGYVQHEC 426
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A F++MQ G+ P + S +S CA ++A++ G + H + + + D S+ A
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNA 486
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+++Y +CG+ A F++ E+K D N ++SG+ ++G +E A+++F M Q VK
Sbjct: 487 LVNLYARCGRIREAFSSFEEMELK--DGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVK 544
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
N +FV+ LSA + + + QI + G + E ++ L G+ G ++A+
Sbjct: 545 HNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETEVGNALISLYGKCGSFEDAKM 603
Query: 309 LIRELPEPTVSVYHSLLGACWCHLNS----DLGEEMAMKLQEMEPENPTPFVILS 359
E+ E +++++ +C H DL ++ MK + ++P + T +L+
Sbjct: 604 EFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQ--MKKEGIKPNDVTFIGVLA 656
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 39/323 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P SV+S+C GR +H K S+ +G A++ +YL+CG A V
Sbjct: 141 PTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERV 200
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ D T+N++ISG +Q G
Sbjct: 201 FCDMP------------------------------------HRDTVTFNTLISGHAQCGH 224
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A ++FE+MQ +G+ P ++S+L+ACA L L+ G + H ++ +A ++ D M +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y+KCG A F+ + + WN M+ +G+ + + E+F MQ ++
Sbjct: 285 LLDLYVKCGDVETALVIFNSSD--RTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIR 342
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN ++ +L C +D QI + + G + G ++D+ + G L++AR
Sbjct: 343 PNQFTYPCILRTCTCTREIDLGEQIHS-LSVKTGFESDMYVSGVLIDMYSKYGWLEKARR 401
Query: 309 LIRELPEPTVSVYHSLLGACWCH 331
++ L E V + S++ H
Sbjct: 402 VLEMLKEKDVVSWTSMIAGYVQH 424
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 160/382 (41%), Gaps = 75/382 (19%)
Query: 47 MIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAH 106
++G L+D+Y K G + A VF+EL N+
Sbjct: 78 IVGNLLIDLYSKNGLVLPARRVFEELSARDNV---------------------------- 109
Query: 107 EGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
+W +M+SG++Q G+ EA L+ +M G+VP+ ++SVLS+C
Sbjct: 110 --------SWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161
Query: 167 GKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGY 226
G+ H + + + A+I++Y++CG A R F ++ D +N +ISG+
Sbjct: 162 GRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVF--CDMPHRDTVTFNTLISGH 219
Query: 227 GRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
+ G E A+EIF+ MQ + P+ + ++L+AC G + K Q+ + + G+
Sbjct: 220 AQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKA-GISSD 278
Query: 287 QEHFGCMVDLLGRSGRLDEAREL---------------------IRELPE---------- 315
G ++DL + G ++ A + I +L +
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQA 338
Query: 316 ----PTVSVYHSLLGACWCHLNSDLGEEM-AMKLQEMEPENPTPFVILSNIYAGLGRWED 370
P Y +L C C DLGE++ ++ ++ + +L ++Y+ G E
Sbjct: 339 AGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 371 VGRIRQMINDRQLTKLPGISAG 392
R+ +M+ ++ + + AG
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAG 420
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 7/210 (3%)
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
E H + L K + LI +Y K G ARR F+ E+ D W AM+SGY +
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFE--ELSARDNVSWVAMLSGYAQ 120
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
NG E A+ ++ M + V P +VLS+C A + ++ G +
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQG-RLIHAQGYKHGFCSEIF 179
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
++ L R G A + ++P +++L+ H GE +EM+
Sbjct: 180 VGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISG---HAQCGHGEHALEIFEEMQ 236
Query: 349 PENPTP-FVILSNIYAGLGRWEDVGRIRQM 377
+P V +S++ A D+ + Q+
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQL 266
>gi|225432810|ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g43790-like [Vitis vinifera]
Length = 590
Score = 234 bits (596), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 208/393 (52%), Gaps = 48/393 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAH 66
+PN TF S+ AC S +L+ GR +H LK +E D + AL++ Y KCG +
Sbjct: 105 KPNGFTFPSLFKACGSQPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACR 164
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ- 125
+F ++ KPD A+WNS++S +
Sbjct: 165 YLFNQIS------------------------------------KPDLASWNSILSAYVHN 188
Query: 126 -------LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
+ + E LF +MQ + + + + +++SACA+L AL G H +V++ +
Sbjct: 189 SGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYVLKHN 248
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
L + + TALI MY KCG A + FDQ + D +NAMI G+ +G A+++
Sbjct: 249 LKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHR--DTLCYNAMIGGFAIHGYGHQALDL 306
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F M E + P+ + V + +C H G V++ +F M + +G++PK EH+GC+VDLLG
Sbjct: 307 FKKMTLEGLAPDDVTLVVTMCSCSHVGLVEEGCDVFESMKEVYGVEPKLEHYGCLVDLLG 366
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+GRL EA E + +P +P ++ SLLGA H N ++GE + L ++EPE +V+
Sbjct: 367 RAGRLREAEERVLNMPMKPNAVIWRSLLGAARVHGNLEIGEVVLKHLIQLEPETSGNYVL 426
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
LSN+YA + RW+DV R+R+++ D + K+PG S
Sbjct: 427 LSNMYASINRWDDVKRVRKLMKDHGINKVPGSS 459
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 127/269 (47%), Gaps = 30/269 (11%)
Query: 111 PDPAT--WNSMISGFSQLGMRFE-AFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKL 166
P+P +N++IS + + AF L+ + + T + P+ S+ AC L+
Sbjct: 67 PNPTIFLYNTLISSLANIKPHTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGSQPWLRH 126
Query: 167 GKETHGHVIR-ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G+ H HV++ + D + AL++ Y KCG+ R F+Q I D A WN+++S
Sbjct: 127 GRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQ--ISKPDLASWNSILSA 184
Query: 226 YGRNG-----EYESAVEIFDL---MQQEKVKPNSASFVAVLSACGHAGHVDKA--LQIFT 275
Y N + ++E+ L MQ+ +K N + VA++SAC G + + ++
Sbjct: 185 YVHNSGAICEDVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELGALSQGAWAHVYV 244
Query: 276 MMDDDFGLKPKQEHF--GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC----W 329
+ + K HF ++D+ + G LD A +L +LP Y++++G +
Sbjct: 245 LKHN-----LKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIGGFAIHGY 299
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
H DL ++M L+ + P++ T V +
Sbjct: 300 GHQALDLFKKMT--LEGLAPDDVTLVVTM 326
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 204/361 (56%), Gaps = 38/361 (10%)
Query: 32 QVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLN 91
QVH +K SDT + A++ Y +CG + A VF +R++
Sbjct: 222 QVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDL------------- 268
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
D +WNS+++GFSQ G+ +A K FE M+S +V
Sbjct: 269 --------------------DHVSWNSILTGFSQSGLSEDALKFFENMRSQYVVIDHYAF 308
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
++VL +C+DL+ L+LG++ H V+++ + +A++LI MY KCG AR+ FD
Sbjct: 309 SAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDA--- 365
Query: 212 KPDDPAF-WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKA 270
P D + WN++I GY ++G + A+++F LM+ +VK + +FVAVL+AC H G V++
Sbjct: 366 TPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEG 425
Query: 271 LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACW 329
M+ D+G+ P+ EH+ CM+DLLGR+GRLDEA+ LI +P EP V+ +LLGAC
Sbjct: 426 WSFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEAMPFEPDAMVWKTLLGACR 485
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGI 389
+ +L ++A L E+EPE +V+LS+++ L RW + I++++ +R + K+PG
Sbjct: 486 TCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVKKVPGW 545
Query: 390 S 390
S
Sbjct: 546 S 546
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 149/317 (47%), Gaps = 38/317 (11%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ +F S++ A + Y++ G+QVH + +K+ + + G+AL+DMY KC
Sbjct: 99 DGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCE--------- 149
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
R E A E+F+ + + TWN++ISG++Q+G R
Sbjct: 150 -----------------------RVEDAFEVFKSINIR----NSVTWNALISGYAQVGDR 182
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
AF L + M+ G+ +L+ D KL + H +++ L D ++ A+
Sbjct: 183 GTAFWLLDCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAI 242
Query: 190 ISMYMKCGQPSWARRFFD-QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
I+ Y +CG A R FD E + D WN++++G+ ++G E A++ F+ M+ + V
Sbjct: 243 ITAYSECGSIEDAERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQYVV 302
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
+ +F AVL +C + Q+ ++ G +P ++ + + G +++AR+
Sbjct: 303 IDHYAFSAVLRSCSDLATLQLGQQVHVLVLKS-GFEPNGFVASSLIFMYSKCGVIEDARK 361
Query: 309 LIRELPEPTVSVYHSLL 325
P+ + ++SL+
Sbjct: 362 SFDATPKDSSIAWNSLI 378
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 34 HGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGR 93
H L +K + ++ Y KCG + A +F E R+ ++WNTMIAG + G
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGE-TSQRDAVSWNTMIAGFVNLGN 80
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
E A+E + + GF D ++ S++ G + +G
Sbjct: 81 FETALEFLKSMKRYGFAVDGYSFGSILKGVACVGY------------------------- 115
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+++G++ H +++ + +AL+ MY KC + A F I+
Sbjct: 116 ----------VEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIR- 164
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
+ WNA+ISGY + G+ +A + D M+ E V+ + +F
Sbjct: 165 -NSVTWNALISGYAQVGDRGTAFWLLDCMELEGVEIDDGTF 204
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 105/240 (43%), Gaps = 12/240 (5%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
F +V+ +C+ L LQ G+QVH L LK + + + ++L+ MY KCG + A F
Sbjct: 308 FSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDARKSFDATP 367
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAF 133
+I WN++I G +GR + A++LF + K D T+ ++++ S +G+ E +
Sbjct: 368 KDSSI-AWNSLIFGYAQHGRGKIALDLFFLMKDRRVKLDHITFVAVLTACSHIGLVEEGW 426
Query: 134 KLFEKMQSTGMVP----SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ M+S +P C+ +L L K E D + L
Sbjct: 427 SFLKSMESDYGIPPRMEHYACMIDLLGRAGRLDEAKALIEA------MPFEPDAMVWKTL 480
Query: 190 ISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
+ CG A + E++P++ + + S +G + I LM++ VK
Sbjct: 481 LGACRTCGDIELASQVASHLLELEPEEHCTYVLLSSMFGHLRRWNEKASIKRLMKERGVK 540
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 3/167 (1%)
Query: 159 ADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAF 218
+ +AL H I++ A +IS Y KCG+ A + F E D
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFG--ETSQRDAVS 67
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN MI+G+ G +E+A+E M++ + SF ++L G+V+ Q+ +MM
Sbjct: 68 WNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMM- 126
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
G + ++D+ + R+++A E+ + + +++L+
Sbjct: 127 VKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALI 173
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 198/384 (51%), Gaps = 42/384 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T +S+++ C L FGR +HG +K + +T + T+L +MY+ CG A N+F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ D +WNS+IS + +
Sbjct: 524 TRCP------------------------------------QRDLVSWNSLISSYIKNDNA 547
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--LNKDESMAT 187
+A LF M S + P+ + ++L++C L+ L LG+ H + R + L D S+A
Sbjct: 548 GKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A I+MY +CG+ +A + F + + WNAMI+GYG +G A F M +
Sbjct: 607 AFITMYARCGKLQYAEKIFCTLQTR--SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGF 664
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ SF +VLSAC H+G LQ+F M DFG+ P+ H+GCMVDLLGR G EA
Sbjct: 665 KPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAI 724
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I +P EP S++ +LL +C N+ L E + KL E+EP NP F++LSNIYA G
Sbjct: 725 AFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAG 784
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V +IR+ + +R L K PG S
Sbjct: 785 LWSEVVQIRKWLRERGLGKPPGTS 808
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 53/332 (15%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E L P+S T V+ AC L + G ++H ++ +D +GTALVD Y KCG +
Sbjct: 52 ESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLV 111
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ + D +WN++ISG
Sbjct: 112 AEASKVFVEMP------------------------------------ERDLVSWNALISG 135
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NK 181
+ EA LF +M+ G+ P+ + V ++L AC ++ L+LG+E HG+ +R L +
Sbjct: 136 YVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDM 195
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + TAL+ YM+ + R F ++ + WNA+I+G+ G+ A++++
Sbjct: 196 DAYVGTALVGFYMRF-DAVLSHRVFSLMLVR--NIVSWNAIITGFLNVGDCAKALKLYSS 252
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVD 295
M E +K ++ + + V+ AC G + +Q+ F +++D F L +++
Sbjct: 253 MLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNA-------LLN 305
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ +G L+ + L +P ++++S++ +
Sbjct: 306 MYSDNGSLESSWALFNAVPTSDAALWNSMISS 337
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 44/256 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T ++++ AC +L L+ G+++HG L+ D +GTALV Y++ + +H
Sbjct: 159 PNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHR 217
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L RNI++WN +I G + G KA++L+ + EG K D T
Sbjct: 218 VF-SLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVT------------ 264
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ V+ ACA+ L+LG + H I+ +L D +
Sbjct: 265 -----------------------MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILN 301
Query: 188 ALISMYMKCG--QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AL++MY G + SWA F+ + D A WN+MIS Y G + A+ +F M+ E
Sbjct: 302 ALLNMYSDNGSLESSWA--LFN--AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLE 357
Query: 246 KVKPNSASFVAVLSAC 261
++K + + +LS C
Sbjct: 358 RIKEDVRTIAIMLSLC 373
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 49/357 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++VT + VI ACA L+ G Q+H L +K +D I AL++MY
Sbjct: 261 DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSD----------- 309
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
NG E + LF + D A WNSMIS + G
Sbjct: 310 ---------------------NGSLESSWALFNAVP----TSDAALWNSMISSYIGFGFH 344
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL-GKETHGHVIRADLNKDESMATA 188
EA LF KM+ + ++ + +LS C DL+ + G+ H H +++ + D + A
Sbjct: 345 AEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNA 404
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+SMY+K Q + A+ F++ ++ D WN MIS + ++ A E+F +M + ++K
Sbjct: 405 LLSMYVKHNQITAAQYVFEK--MRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIK 462
Query: 249 PNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
NS + V++L+ C + +++ F + + GL+ + ++ G A
Sbjct: 463 FNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN---GLEINTSLNTSLTEMYINCGDERAA 519
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM---KLQEMEPENPTPFVILSN 360
+ P+ + ++SL+ + N + G+ + + + E+EP + T IL++
Sbjct: 520 TNMFTRCPQRDLVSWNSLISSYI--KNDNAGKALLLFNHMISELEPNSVTIINILTS 574
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
+GR +H +K + D +G AL+ MY+K + A VF++++G
Sbjct: 382 WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRG-------------- 427
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
D +WN+MIS F+Q R +AF+LF M + + +
Sbjct: 428 ----------------------LDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ S+L+ C D S L G+ HG I+ L + S+ T+L MY+ CG A F +
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH-- 266
D WN++IS Y +N A+ +F+ M E ++PNS + + +L++C H
Sbjct: 526 --CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLP 582
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + L +T + L+ + + R G+L A ++ L ++ +++++
Sbjct: 583 LGQCLHAYT-TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMI 640
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
EPNSVT I+++++C L +L G+ +H T + + + D + A + MY +CG L A
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F L+ +R+I++WN MI G ++GR A F + +GFKP+ ++ S++S S
Sbjct: 622 EKIFCTLQ-TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSH 680
Query: 126 LGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ +LF M + G+ P L C+ +L S E + +
Sbjct: 681 SGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFS------EAIAFINSMPIEP 734
Query: 182 DESMATALI-SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S+ AL+ S +K F E++P +P + + + Y G + V+I
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794
Query: 241 LMQQEKV-KPNSASFVAVLSACGHAGHVD 268
+++ + KP S++ + + H D
Sbjct: 795 WLRERGLGKPPGTSWIVIGNQVHHFTATD 823
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 98 MELFEGLAHEGFKPDP---------ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
ME+ L+ G P WNS+I ++L + +M+S G+ P
Sbjct: 1 MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ VL AC L+A+ G H + DL D + TAL+ Y KCG + A + F
Sbjct: 61 ATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF-- 118
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
E+ D WNA+ISGY Y+ AV +F M++ + PNS + VA+L ACG
Sbjct: 119 VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACG 172
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++I + + + + + M+ + P+SA+ VL ACG + ++I + +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFI- 86
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG---ACWCHLNSD 335
L +VD + G + EA ++ E+PE + +++L+ C C+
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCY---- 142
Query: 336 LGEEMAMKLQEMEPENPTP 354
+E + EM+ TP
Sbjct: 143 --KEAVLLFVEMKKAGLTP 159
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 134/387 (34%), Positives = 216/387 (55%), Gaps = 10/387 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P+ +T+ SV A A L +G Q+HG +K+ Q D I ++ MY CG L
Sbjct: 120 SVQPHRLTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEM 179
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F E + +I+ WN+MI G+ G +++ +LF+ + + +WNSMISG+ +
Sbjct: 180 WKAFYE-RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLR----NTVSWNSMISGYVR 234
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA LF +MQ + PS + S+L+A A L ALK G+ H ++ + + + +
Sbjct: 235 NGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIV 294
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKP-DDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++I MY KCG A F FE+ P + WN MI G NG A+++F ++
Sbjct: 295 TASIIDMYCKCGSIGEA---FQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLEC 351
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
++P+ +FV VL+AC ++G VDKA + F++M + ++P +H+ CMVD LGR+G L+
Sbjct: 352 SNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLE 411
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA ELIR +P P ++ SLL AC H N +L + A + +++ + +V+LSNIYA
Sbjct: 412 EAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYA 471
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
++E+ R + ++Q+ K PG S
Sbjct: 472 ASDQFEEAMEQRLSMKEKQIEKEPGCS 498
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 17/271 (6%)
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEGFKPDPATWNS 118
G + A+ VF ++ S N+ +WNT+I G + A+ LF + L +P T+ S
Sbjct: 72 GDINYAYLVFTQIH-SPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPS 130
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMV--PSLK-CVTSVLSACADLSALKLGKETHGHVI 175
+ ++QLG+ +L ++ G+ P ++ + + + C LS +
Sbjct: 131 VFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEM-------WKAF 183
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++ D ++I KCG+ +R+ FD+ ++ + WN+MISGY RNG A
Sbjct: 184 YERMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLR--NTVSWNSMISGYVRNGRLREA 241
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-DDDFGLKPKQEHFGCMV 294
+++F MQ+E++KP+ + V++L+A G + + I + ++F L ++
Sbjct: 242 LDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVT--ASII 299
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
D+ + G + EA ++ P +S +++++
Sbjct: 300 DMYCKCGSIGEAFQVFEMAPLKGLSSWNTMI 330
>gi|357136551|ref|XP_003569867.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Brachypodium distachyon]
Length = 580
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 208/383 (54%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F +V ACA L L+ G VH ++ + SD + TALV +Y KCG LP A +F
Sbjct: 104 SSFAFTAVAKACADLSALRTGMTVHAHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLF 163
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ +N++ W N+MISG+ Q G+
Sbjct: 164 DAIR-DKNVVAW-----------------------------------NAMISGYEQNGLA 187
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
+ +++++M+ VP + LSACA AL LG+E ++ ++ + +AL
Sbjct: 188 EQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSAL 247
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG AR++FD + + + W +MI+GYG +G A++++ LM+ + P
Sbjct: 248 VNMYARCGVVDKARQWFDVLQER--NVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPP 305
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FVAVLSAC HAG + + F M +GL P+ EH+ MVD+ GR+GRL+EA +
Sbjct: 306 NDVTFVAVLSACAHAGLITEGRDAFACMKRVYGLAPRVEHYCSMVDMYGRAGRLEEAMQF 365
Query: 310 IRE-LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
IR+ +P +P V+ ++LGAC H N LG E+A +L +EPENP+ V+LSNIYA G+
Sbjct: 366 IRDSMPGDPGPEVWTAILGACKMHKNFSLGVEVAERLIRLEPENPSYHVLLSNIYALSGK 425
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
V ++R + R+L K G S
Sbjct: 426 MYHVEKVRNTMIKRRLKKQIGYS 448
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 128/266 (48%), Gaps = 24/266 (9%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
D ++S+ + G+ A + + S + S T+V ACADLSAL+ G H
Sbjct: 69 DSFLFSSLARAATHQGLPLAALAFYRCLLSAALPFSSFAFTAVAKACADLSALRTGMTVH 128
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
H I D + TAL+ +Y KCG+ AR+ FD I+ + WNAMISGY +NG
Sbjct: 129 AHSILLGFGSDRFVLTALVVLYSKCGRLPVARKLFDA--IRDKNVVAWNAMISGYEQNGL 186
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQ-----IFTMMDDDFGLKPK 286
E +E++ M+ K P+S +FVA LSAC AG +D + + MD L
Sbjct: 187 AEQGIEVYKEMKVAKAVPDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLG-- 244
Query: 287 QEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+V++ R G +D+AR+ L E V + S++ H + G E A+KL
Sbjct: 245 ----SALVNMYARCGVVDKARQWFDVLQERNVVTWTSMIAGYGMHGH---GHE-AIKLYH 296
Query: 347 M-----EPENPTPFV-ILSN-IYAGL 365
+ P N FV +LS +AGL
Sbjct: 297 LMRCKGPPPNDVTFVAVLSACAHAGL 322
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 43/266 (16%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+S+TF++ +SACA L GR+V + +G+ALV+MY +CG + A
Sbjct: 204 PDSMTFVATLSACAQAGALDLGREVERRIVSERMDISVFLGSALVNMYARCGVVDKARQW 263
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F L+ RN++TW +MIAG ++G +A++L+ + +G P+ T+ +++S + G+
Sbjct: 264 FDVLQ-ERNVVTWTSMIAGYGMHGHGHEAIKLYHLMRCKGPPPNDVTFVAVLSACAHAGL 322
Query: 129 RFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E F M+ G+ P ++ S
Sbjct: 323 ITEGRDAFACMKRVYGLAPRVEHYCS---------------------------------- 348
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
++ MY + G+ A +F P W A++ + + VE+ + + ++
Sbjct: 349 -MVDMYGRAGRLEEAMQFIRDSMPGDPGPEVWTAILGACKMHKNFSLGVEVAERLI--RL 405
Query: 248 KPNSASFVAVLS----ACGHAGHVDK 269
+P + S+ +LS G HV+K
Sbjct: 406 EPENPSYHVLLSNIYALSGKMYHVEK 431
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALV 53
+ C PN VTF++V+SACA + GR +V+GL ++E ++V
Sbjct: 297 LMRCKGPPPNDVTFVAVLSACAHAGLITEGRDAFACMKRVYGLAPRVEHY------CSMV 350
Query: 54 DMYLKCGCLPCAHNVFQE-LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPD 112
DMY + G L A ++ + G W ++ ++ +E+ E L +P+
Sbjct: 351 DMYGRAGRLEEAMQFIRDSMPGDPGPEVWTAILGACKMHKNFSLGVEVAERLIR--LEPE 408
Query: 113 PATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLK 149
+++ ++S L + EK+++T + LK
Sbjct: 409 NPSYHVLLSNIYALSGKMYH---VEKVRNTMIKRRLK 442
>gi|195611854|gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/389 (34%), Positives = 212/389 (54%), Gaps = 13/389 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P + T + + AC L GR +HG +K+ + + TAL+ MY + G A +
Sbjct: 122 PTAHTLSASLPACGCL---AVGRALHGYAVKLALSGEPYVATALLGMYARAGEAAAARAL 178
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F ++ ++++ M++ G+ + A LF+ L + D WN+M+ G++Q G
Sbjct: 179 FDGMRPDPHVVSVTAMLSCYAKMGQLDDARGLFDALP----RKDLVCWNAMMDGYTQHGR 234
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI----RADLNKDES 184
EA +LF +M +G+ P V LSA A L + G+ H V RA + +
Sbjct: 235 PSEALRLFRQMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVANGGRRARVRLNAR 294
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ TAL+ MY KCG A F D D WNAMI+GY +G A+E F ++
Sbjct: 295 VGTALVDMYYKCGSLEEAVAVFRDLGGGGDRDVVAWNAMINGYAMHGRSREALEAFGQLR 354
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ + P +F+ VL+AC H+G VD+ +F M++++G+ PK EH+GCMVDLLGR+GR+
Sbjct: 355 AQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRAGRV 414
Query: 304 DEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
+EA +L++ + +P +++ SLLGAC H N LG+ +A L N +V+LSN+Y
Sbjct: 415 EEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQRVADYLVGNGLANSGTYVLLSNMY 474
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A G+W +VGR+R M+ + K PG SA
Sbjct: 475 AAAGKWREVGRVRSMMRASGVQKEPGCSA 503
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 214/383 (55%), Gaps = 8/383 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ + +++SAC +++ R ++ ++ + + DT + TALV MY GC+ A
Sbjct: 213 PDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEF 272
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+++ RN+ M++G GR + A +F+ + D W +MIS +++
Sbjct: 273 FRKM-SVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMK----DLVCWTTMISAYAESDH 327
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++FE+M +G+ P + + SV+SAC +L L K H + L + A
Sbjct: 328 PQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNA 387
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI+MY KCG AR F++ + + W++MI+ + +GE ++ +F M+QE V+
Sbjct: 388 LINMYAKCGGLDAARDVFEKMPTR--NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVE 445
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
PN +FV VL C H+G V++ +IF M D++ + PK EH+GCMVDL GR+ L EA E
Sbjct: 446 PNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALE 505
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P V ++ SL+ AC H +LGE A ++ ++EP++ V++SNIYA R
Sbjct: 506 VIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYR 565
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W+ V IR ++ +++ K G+S
Sbjct: 566 WDYVRIIRWIMEKKKVFKEKGLS 588
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 175/352 (49%), Gaps = 17/352 (4%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ ++F ++ A + + L G ++HG KI SD + T L+DMY CG + A NVF
Sbjct: 113 DRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVF 172
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG-M 128
E+ R+++TWNTMI G ++A +LFE + PD +++S + G M
Sbjct: 173 DEM-SQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNM 231
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
R+ +++ + + +T++++ A + + E R ++ ++TA
Sbjct: 232 RYNR-AIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAME----FFRKMSVRNLFVSTA 286
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++S Y K G+ AR FDQ E+K D W MIS Y + + A+ +F+ M +K
Sbjct: 287 MVSGYSKAGRLDDARVIFDQTEMK--DLVCWTTMISAYAESDHPQEALRVFEEMCCSGIK 344
Query: 249 PNSASFVAVLSACGHAGHVDKA--LQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
P+ + ++V+SAC + G +DKA + +T ++ GL+ ++++ + G LD A
Sbjct: 345 PDVVTMLSVISACVNLGTLDKAKWVHRYTHLN---GLESVLPIDNALINMYAKCGGLDAA 401
Query: 307 RELIRELPEPTVSVYHSLLGACWCH--LNSDLGEEMAMKLQEMEPENPTPFV 356
R++ ++P V + S++ A H + L MK + +EP N FV
Sbjct: 402 RDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEP-NEVTFV 452
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 34/216 (15%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C +P+ VT +SVISAC +L L + VH T +S I AL++MY KCG L
Sbjct: 340 CSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLD 399
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A +VF+++ +RN+++W++MI ++G + ++ LF + E +P+ T+ ++ G
Sbjct: 400 AARDVFEKMP-TRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGC 458
Query: 124 SQLGMRFEAFKLF---------------------------------EKMQSTGMVPSLKC 150
S G+ E K+F E ++S M P++
Sbjct: 459 SHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVI 518
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
S++SAC L+LG+ +++ + + D ++
Sbjct: 519 WGSLMSACRVHGELELGELAAKRILKLEPDHDGALV 554
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 123/303 (40%), Gaps = 45/303 (14%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + +S C SL ++ +Q+H L+ + L A N+F +
Sbjct: 17 TILEKLSFCKSLNHI---KQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSI 73
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ +N+++ + +G + ++ + H G + D ++
Sbjct: 74 SPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFP--------------- 118
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
P LK V+ V SAL G E HG + D + T L+ M
Sbjct: 119 -------------PILKAVSKV-------SALFEGMELHGFAFKIATLSDPFVETGLMDM 158
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y CG+ ++AR FD E+ D WN MI Y R G + A ++F+ M+ V P+
Sbjct: 159 YAACGRINYARNVFD--EMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEM 216
Query: 253 SFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
++SACG G++ ++A+ F + +D ++ +V + +G +D A E
Sbjct: 217 ILCNIVSACGRTGNMRYNRAIYDFLIEND---VRMDTHLLTALVTMYAGAGCMDMAMEFF 273
Query: 311 REL 313
R++
Sbjct: 274 RKM 276
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 198/384 (51%), Gaps = 42/384 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
NS T +S+++ C L FGR +HG +K + +T + T+L +MY+ CG A N+F
Sbjct: 464 NSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMF 523
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ D +WNS+IS + +
Sbjct: 524 TRCP------------------------------------QRDLVSWNSLISSYIKNDNA 547
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--LNKDESMAT 187
+A LF M S + P+ + ++L++C L+ L LG+ H + R + L D S+A
Sbjct: 548 GKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLAN 606
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
A I+MY +CG+ +A + F + + WNAMI+GYG +G A F M +
Sbjct: 607 AFITMYARCGKLQYAEKIFCTLQTR--SIVSWNAMITGYGMHGRGRDATLAFAQMLDDGF 664
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN+ SF +VLSAC H+G LQ+F M DFG+ P+ H+GCMVDLLGR G EA
Sbjct: 665 KPNNVSFASVLSACSHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAI 724
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I +P EP S++ +LL +C N+ L E + KL E+EP NP F++LSNIYA G
Sbjct: 725 AFINSMPIEPDASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAG 784
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
W +V +IR+ + +R L K PG S
Sbjct: 785 LWSEVVQIRKWLRERGLGKPPGTS 808
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 155/332 (46%), Gaps = 53/332 (15%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E L P+S T V+ AC L + G ++H ++ +D +GTALVD Y KCG +
Sbjct: 52 ESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLV 111
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ + D +WN++ISG
Sbjct: 112 AEASKVFVEMP------------------------------------ERDLVSWNALISG 135
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NK 181
+ EA LF +M+ G+ P+ + V ++L AC ++ L+LG+E HG+ +R L +
Sbjct: 136 YVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDM 195
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + TAL+ YM+ + R F ++ + WNA+I+G+ G+ A++++
Sbjct: 196 DAYVGTALVGFYMRF-DAVLSHRVFSLMLVR--NIVSWNAIITGFLNVGDCAKALKLYSS 252
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVD 295
M E +K ++ + + V+ AC G + +Q+ F +++D F L +++
Sbjct: 253 MLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNA-------LLN 305
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ +G L+ + L +P ++++S++ +
Sbjct: 306 MYSDNGSLESSWALFNAVPTSDAALWNSMISS 337
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 44/256 (17%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T ++++ AC +L L+ G+++HG L+ D +GTALV Y++ + +H
Sbjct: 159 PNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAV-LSHR 217
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L RNI++WN +I G + G KA++L+ + EG K D T
Sbjct: 218 VFS-LMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVT------------ 264
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ V+ ACA+ L+LG + H I+ +L D +
Sbjct: 265 -----------------------MLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILN 301
Query: 188 ALISMYMKCG--QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AL++MY G + SWA F+ + D A WN+MIS Y G + A+ +F M+ E
Sbjct: 302 ALLNMYSDNGSLESSWA--LFN--AVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLE 357
Query: 246 KVKPNSASFVAVLSAC 261
++K + + +LS C
Sbjct: 358 RIKEDVRTIAIMLSLC 373
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 161/357 (45%), Gaps = 49/357 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
++VT + VI ACA L+ G Q+H L +K +D I AL++MY
Sbjct: 261 DAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSD----------- 309
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
NG E + LF + D A WNSMIS + G
Sbjct: 310 ---------------------NGSLESSWALFNAVP----TSDAALWNSMISSYIGFGFH 344
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL-GKETHGHVIRADLNKDESMATA 188
EA LF KM+ + ++ + +LS C DL+ + G+ H H +++ + D + A
Sbjct: 345 AEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDAYLGNA 404
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+SMY+K Q + A+ F++ ++ D WN MIS + ++ A E+F +M + ++K
Sbjct: 405 LLSMYVKHNQITAAQYVFEK--MRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIK 462
Query: 249 PNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
NS + V++L+ C + +++ F + + GL+ + ++ G A
Sbjct: 463 FNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKN---GLEINTSLNTSLTEMYINCGDERAA 519
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM---KLQEMEPENPTPFVILSN 360
+ P+ + ++SL+ + N + G+ + + + E+EP + T IL++
Sbjct: 520 TNMFTRCPQRDLVSWNSLISSYI--KNDNAGKALLLFNHMISELEPNSVTIINILTS 574
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 134/299 (44%), Gaps = 42/299 (14%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
+GR +H +K + D +G AL+ MY+K + A VF++++G
Sbjct: 382 WGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRG-------------- 427
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
D +WN+MIS F+Q R +AF+LF M + + +
Sbjct: 428 ----------------------LDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNS 465
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ S+L+ C D S L G+ HG I+ L + S+ T+L MY+ CG A F +
Sbjct: 466 YTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEMYINCGDERAATNMFTR 525
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH-- 266
D WN++IS Y +N A+ +F+ M E ++PNS + + +L++C H
Sbjct: 526 --CPQRDLVSWNSLISSYIKNDNAGKALLLFNHMISE-LEPNSVTIINILTSCTQLAHLP 582
Query: 267 VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ + L +T + L+ + + R G+L A ++ L ++ +++++
Sbjct: 583 LGQCLHAYT-TRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVSWNAMI 640
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 127/269 (47%), Gaps = 15/269 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
EPNSVT I+++++C L +L G+ +H T + + + D + A + MY +CG L A
Sbjct: 562 EPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYA 621
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F L+ +R+I++WN MI G ++GR A F + +GFKP+ ++ S++S S
Sbjct: 622 EKIFCTLQ-TRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSH 680
Query: 126 LGMRFEAFKLFEKM-QSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ +LF M + G+ P L C+ +L S E + +
Sbjct: 681 SGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFS------EAIAFINSMPIEP 734
Query: 182 DESMATALI-SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
D S+ AL+ S +K F E++P +P + + + Y G + V+I
Sbjct: 735 DASIWRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRK 794
Query: 241 LMQQEKV-KPNSASFVAVLSACGHAGHVD 268
+++ + KP S++ + + H D
Sbjct: 795 WLRERGLGKPPGTSWIVIGNQVHHFTATD 823
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 98 MELFEGLAHEGFKPDP---------ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL 148
ME+ L+ G P WNS+I ++L + +M+S G+ P
Sbjct: 1 MEIAVNLSFHGLSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDS 60
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
+ VL AC L+A+ G H + DL D + TAL+ Y KCG + A + F
Sbjct: 61 ATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVF-- 118
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACG 262
E+ D WNA+ISGY Y+ AV +F M++ + PNS + VA+L ACG
Sbjct: 119 VEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACG 172
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 219 WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD 278
WN++I + + + + + M+ + P+SA+ VL ACG + ++I + +
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCI- 86
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLG---ACWCHLNSD 335
L +VD + G + EA ++ E+PE + +++L+ C C+
Sbjct: 87 RGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCY---- 142
Query: 336 LGEEMAMKLQEMEPENPTP 354
+E + EM+ TP
Sbjct: 143 --KEAVLLFVEMKKAGLTP 159
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 214/442 (48%), Gaps = 61/442 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF V+ +C + L G QVH +K + + +GT L+DMY G + A+
Sbjct: 133 RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 192
Query: 68 VFQE------------------------------LKGSRNILTWNTMIAGMMLNGRSEKA 97
+F E L R+++ WN M++G + G +A
Sbjct: 193 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 252
Query: 98 MELF---------------------------EGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+LF EGL E + + +WN++I G++ G+ F
Sbjct: 253 RKLFHEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF 312
Query: 131 EAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E F++M S VP + + +VLSACA L AL LGK H + + L + + AL
Sbjct: 313 EVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNAL 372
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A F + K D WN +I G + A+ +F M+ KP
Sbjct: 373 MDMYAKCGIIENAISVFRGMDTK--DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 430
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +L AC H G V+ F M DD+ + P+ EH+GCMVD+L R+GRL++A
Sbjct: 431 DGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAF 490
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P E ++ LLGAC + N +L E +L E+EP+NP +V+LSNIY GRW
Sbjct: 491 VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRW 550
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
EDV R++ + D KLPG S
Sbjct: 551 EDVARLKVAMRDTGFKKLPGCS 572
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 93 RSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
R A +LF+ + PDP A WNSM G++Q E LF +M+ + P+
Sbjct: 85 RMTYARQLFDQI------PDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFT 138
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF-DQF 209
VL +C ++AL G++ H +I+ + + T LI MY G A + F + F
Sbjct: 139 FPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMF 198
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
E + W +MI+GY + + SA +FDL + V + ++S G + +
Sbjct: 199 E---RNVVAWTSMINGYILSADLVSARRLFDLAPERDV----VLWNIMVSGYIEGGDMVE 251
Query: 270 ALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
A ++F M P ++ + ++ +G ++ L E+PE + +++L+G
Sbjct: 252 ARKLFHEM-------PNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGG 304
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ ++ L E+ + M E+ P
Sbjct: 305 ---YAHNGLFFEVLGSFKRMLSESDVP 328
>gi|147765658|emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
Length = 1849
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 214/386 (55%), Gaps = 11/386 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK---IEKQSDTMIGTALVDMYLKCGCLPCA 65
P+S+T +++I A++ ++ ++ H +++ ++ + +G ++D Y KCG + A
Sbjct: 1381 PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAXPTLGNGMLDAYAKCGNMKYA 1440
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
N+F L RN++T N+MI+G + + + A +F ++ + D TWN M+ +++
Sbjct: 1441 VNIFGSLSEKRNVVTCNSMISGYVTSSSHDDAYAIFNTMS----ETDLTTWNLMVRVYAE 1496
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+A LF ++Q GM P + + S+L ACA ++++ + ++ HG+VIRA N D +
Sbjct: 1497 NDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFN-DVRL 1555
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A I MY KCG A + F D + AM+ G+ +G E A+ IF M +
Sbjct: 1556 NGAFIDMYSKCGSVFGAYKLF--LSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLEL 1613
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+ AVL AC HAG VD+ +IF ++ G +P E + C+VDLL R GR+ +
Sbjct: 1614 GVKPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKD 1673
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + +P E +++ +LLGAC H +LG +A L ++E +N +V++SN+YA
Sbjct: 1674 AYTFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAA 1733
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
RW+ V IR+++ R+L K G S
Sbjct: 1734 DARWDGVMEIRRLMRTRELKKPAGCS 1759
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 171/376 (45%), Gaps = 56/376 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC--A 65
+PNSVT V+ CA L G+ VH +K +S T+ G AL+ MY KCG L C A
Sbjct: 1071 KPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCG-LVCSDA 1128
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ F ++ FK D +WN++I+GFS+
Sbjct: 1129 YAAFNRIE-----------------------------------FK-DVVSWNAVIAGFSE 1152
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADL---SALKLGKETHGHVIRA-DLNK 181
EAFKLF M + P+ + S+L CA L + + GKE H HV+R +L +
Sbjct: 1153 NKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVE 1212
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-D 240
D S+ +L+S Y++ Q A F +K D WNA+I+GY NGE+ A+E+F +
Sbjct: 1213 DVSVINSLMSFYLRIXQMEKAEFLFRN--MKSRDLVSWNAIIAGYASNGEWLKALELFSE 1270
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
+ E +KP+S + V+VL AC H ++ A I + GL+ ++ +
Sbjct: 1271 FISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKC 1330
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGA-----CWCHLNSDLGEEMAMKLQEMEPENPTPF 355
A + + + ++++L A C HL + L M + + P++ T
Sbjct: 1331 NYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLL---HWMLREGIRPDSITIL 1387
Query: 356 VILSNIYAGLGRWEDV 371
I+ YA + R + V
Sbjct: 1388 TII-QYYAAVSRVKKV 1402
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 42/258 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN +++ +C + ++FG +HG LK+ S + L+++Y K G L +
Sbjct: 968 KPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYCNK 1027
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL- 126
+F E+ + DP WN ++SG +
Sbjct: 1028 LFGEMD------------------------------------QRDPVIWNIVLSGLAGFQ 1051
Query: 127 GMRFEAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
E +LF M P+ + VL CA L GK H +VI++ L
Sbjct: 1052 SHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCARLRE-DAGKSVHSYVIKSGLESHTLA 1110
Query: 186 ATALISMYMKCGQP-SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
ALISMY KCG S A F++ E K D WNA+I+G+ N E A ++F M +
Sbjct: 1111 GNALISMYAKCGLVCSDAYAAFNRIEFK--DVVSWNAVIAGFSENKFTEEAFKLFHAMLK 1168
Query: 245 EKVKPNSASFVAVLSACG 262
++PN A+ ++L C
Sbjct: 1169 GPIQPNYATIASILPVCA 1186
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 14/256 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ VT +S++ ACA + + RQ HG ++ +D + A +DMY KCG + A+
Sbjct: 1516 KPDIVTIMSILPACAHMASVHMLRQCHGYVIR-ACFNDVRLNGAFIDMYSKCGSVFGAYK 1574
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++++ + M+ G ++G E+A+ +F + G KPD +++ S G
Sbjct: 1575 LFLS-SPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAG 1633
Query: 128 MRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ E +K+F ++ G P+++ CV +L+ + K+ + V R + +
Sbjct: 1634 LVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRI------KDAYTFVTRMPIEANA 1687
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ L+ + R D F+I+ D+ + M + Y + ++ +EI LM
Sbjct: 1688 NIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADARWDGVMEIRRLM 1747
Query: 243 Q-QEKVKPNSASFVAV 257
+ +E KP S++ V
Sbjct: 1748 RTRELKKPAGCSWIEV 1763
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 131 EAFKLF-EKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA LF E+++ S G P+ + + ++L +C SA++ G HG+ ++ +S+
Sbjct: 952 EALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGHVSCQSLCKG 1011
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAV-EIFDLMQQ-EK 246
L+++Y K G + + F E+ DP WN ++SG +E+ V +F M +
Sbjct: 1012 LLNLYAKSGALDYCNKLFG--EMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNE 1069
Query: 247 VKPNSASFVAVLSACG 262
KPNS + VL C
Sbjct: 1070 AKPNSVTIAIVLPVCA 1085
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/383 (35%), Positives = 209/383 (54%), Gaps = 39/383 (10%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++ NS + + +I +L R +HG K S++ + TAL +Y +
Sbjct: 304 EKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR-------- 355
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
E++ +R ++ + SEK++ A+WN+MISG++Q
Sbjct: 356 --LNEIESAR-----------LLFDESSEKSL---------------ASWNAMISGYAQN 387
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ +A LF++MQ + P+ VTS+LSACA L AL LGK H + R + ++
Sbjct: 388 GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVS 447
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TALI MY KCG + A+R F K + WNAMISGYG +G A+ +F+ M +
Sbjct: 448 TALIDMYAKCGSITEAQRLFSMMPEK--NAVTWNAMISGYGLHGYGHEALNLFNEMLHSR 505
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
V P +F++VL AC HAG V + +IF M D G +P EH+ CMVDLLGR+G LD+A
Sbjct: 506 VSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKA 565
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ IR++P EP V+ +LLGAC H +++L + KL E++P+N +V+LSNIY+
Sbjct: 566 LDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLSNIYSAG 625
Query: 366 GRWEDVGRIRQMINDRQLTKLPG 388
+ + +R ++ R+L K PG
Sbjct: 626 QNYPEAASVRGVVKRRKLAKTPG 648
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 142/334 (42%), Gaps = 51/334 (15%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
SD +G+A+V Y K + A VF + R+ + WNTM++G++ N ++A+ +F
Sbjct: 139 SDLFVGSAIVACYFKFSRVAAARKVFDGML-ERDTVLWNTMVSGLVKNSCFDEAILIFGD 197
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ G D T +++ G ++L Q + ++C+ A
Sbjct: 198 MVKGGIGFDSTTVAAVLPGVAEL-------------QDLALGMGIQCL-----------A 233
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+K+G +H +VI T L +Y KCG+ AR F Q I D +NAMI
Sbjct: 234 MKVGFHSHAYVI-----------TGLACLYSKCGEIETARLLFGQ--IGQPDLVSYNAMI 280
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY N E ES+V +F + K NS+S V ++ GH+ I +
Sbjct: 281 SGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVV 340
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMK 343
+ + R ++ AR L E E +++ +++++ + + L E+
Sbjct: 341 SNSSV-STALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG---YAQNGLTEKAISL 396
Query: 344 LQEMEP--ENPTPFVILSNIYA-------GLGRW 368
QEM+ P P + S + A LG+W
Sbjct: 397 FQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW 430
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 9/224 (4%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGK 168
PD +N +I FS A L+ + +ST + P V+S + L L
Sbjct: 70 NPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLH 129
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
I A D + +A+++ Y K + + AR+ FD + D WN M+SG +
Sbjct: 130 AHS---IVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDG--MLERDTVLWNTMVSGLVK 184
Query: 229 NGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI-FTMMDDDFGLKPKQ 287
N ++ A+ IF M + + +S + AVL G A D AL + + G
Sbjct: 185 NSCFDEAILIFGDMVKGGIGFDSTTVAAVLP--GVAELQDLALGMGIQCLAMKVGFHSHA 242
Query: 288 EHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ L + G ++ AR L ++ +P + Y++++ C+
Sbjct: 243 YVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCN 286
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 215/387 (55%), Gaps = 7/387 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P++ T S++SACA+L L G+Q+H L+ E ++ +G AL+ MY K G + A
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 66 HNVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ + + S NI+ + +++ G G + A E+F L D W +MI G+
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR----DVVAWTAMIVGYV 385
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G+ +A +LF M + G P+ + ++LS + L+ L+ GK+ H I+A + S
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ALI+MY K G + A+R FD K + + W +MI ++G + A+ +F+ M
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVS-WTSMIMALAQHGLGKEAINLFERMLS 504
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+KP+ ++V VLSAC H G V++ + + MM + ++P H+ CM+DL GR+G L
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA I +P EP + SLL +C H N+DL + A +L ++P N ++ L+N+Y+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE+ + R+++ DR + K GIS
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGIS 651
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 189/394 (47%), Gaps = 57/394 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +V+S+CA+ L GR++H +K+ S + T+L++MY KCG A V
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +NI TWN +I+ M +G+ E A FE + D +WNSMISG+SQ G
Sbjct: 200 FDRMT-VKNISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNSMISGYSQQGY 254
Query: 129 RFEAFKLFEKMQSTGMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
EA +F KM + PSLK + S+LSACA+L L +GK+ H +++RA+ +
Sbjct: 255 NLEALVIFSKMLNE---PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311
Query: 185 MATALISMYMKCGQPSWAR-----------------RFFDQF----EIKPDDPAF----- 218
+ ALISMY K G AR D + +KP F
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371
Query: 219 -----WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
W AMI GY +NG + A+E+F LM E +PNS + A+LS ++ QI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP--EPTVSVYHSLLGACWCH 331
G ++ + ++G ++ A+ + +LP + + + S++ A H
Sbjct: 432 HASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQH 489
Query: 332 LNSDLGEEMAMKLQE------MEPENPTPFVILS 359
LG+E A+ L E M+P++ T +LS
Sbjct: 490 ---GLGKE-AINLFERMLSVGMKPDHITYVGVLS 519
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 189/414 (45%), Gaps = 51/414 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQF-GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
+ + P S F + I + + F GR VH +K + L+ Y K G L
Sbjct: 3 VGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH+VF E+ ++ +WNT+I+G G E + L +E DP +W ++I G+
Sbjct: 63 FAHHVFDEMP-LKSTFSWNTLISGYAKQGNFEVSRRLL----YEMPDCDPVSWTAIIVGY 117
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q G+ A +F KM S + PS V++VLS+CA L +G++ H V++ L
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 184 SMATALISMYMKCGQPSWARRFFD----------------------------QFEIKPD- 214
+AT+L++MY KCG P A+ FD QFE PD
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MISGY + G A+ IF M E +KP++ + ++LSAC + ++ QI
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 274 FTMMDDDFGLKPKQEHFG----CMVDLLGRSGRLDEARELIRELPEPTVSV--YHSLLGA 327
+ L+ + E G ++ + +SG ++ AR ++ +++ + SLL
Sbjct: 298 HAYI-----LRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI-RQMIND 380
N E+ KL++ + T ++ Y G W D + R M+N+
Sbjct: 353 YTKLGNVKPAREIFNKLRDRDVVAWTAMIVG---YVQNGLWNDALELFRLMVNE 403
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 198/387 (51%), Gaps = 40/387 (10%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P+ VT +S +S C L L G+++HGL D +G++L+DMY KCG +
Sbjct: 226 SLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQI--- 282
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
E A ++F+ + H + W SMI+G++Q
Sbjct: 283 -----------------------------EDARKVFDRIPHR----NTVCWTSMIAGYAQ 309
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
+ EA +LF +MQ G + VLSAC AL G+ H + R + D +
Sbjct: 310 SDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNA 369
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ- 244
ALI MY KCG A F +PD + W+A+ISG NGE + A+ +F M+
Sbjct: 370 RNALIGMYSKCGDIQKALEIFHGLT-QPDIFS-WSAVISGLAMNGESDKALHLFSQMEMI 427
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
++PN +F+ VL AC H G VDK L F M + L P EH+GCMVDLLGR+ L
Sbjct: 428 SDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLV 487
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA + IR LP +P V ++ SLL AC H N +L E A +++E+EP V+LSN+YA
Sbjct: 488 EAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYA 547
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
RW DV R+R+ + +++ K PG S
Sbjct: 548 SASRWGDVKRVRKDMATQRIKKQPGCS 574
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 40/352 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ +F V+ ACA L L GR++H TLK+ D + AL+ + CG + A V
Sbjct: 125 PDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 184
Query: 69 FQELKG-SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQL 126
F L R++++WN+MI+G + + R E A+++F L +G PD T
Sbjct: 185 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVT----------- 233
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ S LS C L L LGK+ HG + D +
Sbjct: 234 ------------------------LVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVG 269
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++LI MY KCGQ AR+ FD+ I + W +MI+GY ++ ++ A+E+F MQ
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDR--IPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGG 327
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++A+ VLSACGH G + + I + + ++ ++ + + G + +A
Sbjct: 328 FAADAATIACVLSACGHWGALAQGRWIHLYCERN-SIEMDLNARNALIGMYSKCGDIQKA 386
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVIL 358
E+ L +P + + +++ + SD + +++ + P L
Sbjct: 387 LEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFL 438
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
KP+ +WN M +S+ E L+ M G +P VL ACA LS L G+E
Sbjct: 89 KPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGRE 148
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
H ++ ++ D + ALIS + CG AR FD D WN+MISGY ++
Sbjct: 149 IHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQS 208
Query: 230 GEYESAVEIF-DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQE 288
YE A+++F +L+ + P+ + V+ LS CG G +D +I + G
Sbjct: 209 HRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGS-GFVLDVF 267
Query: 289 HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
++D+ + G++++AR++ +P + S++ + SDL +E +EM+
Sbjct: 268 VGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAG---YAQSDLFKEAIELFREMQ 324
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP-SWARRFFDQFEIKP 213
LS +LS + + H I + + +D +++ L+ + +++R F F+I
Sbjct: 32 LSLLQNLSHPRSFNQILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLF--FQIHK 89
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ WN M Y R+ + +++LM + P++ SF VL AC + K +I
Sbjct: 90 PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149
Query: 274 FT 275
+
Sbjct: 150 HS 151
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/376 (34%), Positives = 207/376 (55%), Gaps = 8/376 (2%)
Query: 16 SVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGS 75
+++ C+ Y G +HG T+K S +G A++ MY KCG A VF+ L
Sbjct: 384 TILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR-LMPL 442
Query: 76 RNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKL 135
RN ++W MI +G KA F+ + + TWNSM+S + Q G E KL
Sbjct: 443 RNTISWTAMITAFSRSGDIGKARGYFDMMPER----NIVTWNSMLSTYVQNGFSEEGLKL 498
Query: 136 FEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMK 195
+ M+S G+ P T+ + ACADL+ +KLG + H + L+ + S+A ++++MY +
Sbjct: 499 YVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558
Query: 196 CGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
CG A+ FD + K D WNAM++ + +NG ++ F+ M + + KPN S+V
Sbjct: 559 CGLIKEAKNTFDSIDDK--DLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYV 616
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP- 314
+VLS C H G V + F M FG+ P EHF CMVDLLGR+G L++A++LI +P
Sbjct: 617 SVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPF 676
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI 374
+P +V+ +LLG+C H + L E A KL E++ E +V+LSN+Y+ G ++V +
Sbjct: 677 KPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADM 736
Query: 375 RQMINDRQLTKLPGIS 390
R+++ + + G S
Sbjct: 737 RKLMKVKGIRTSRGCS 752
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 169/373 (45%), Gaps = 45/373 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
+F SV+ AC SL + Q+H L K+ +T I ++V MY+KCG + A VF ++
Sbjct: 148 SFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDI 207
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ ++ WN+MI G KA+++F + D +WN++IS FSQ G +
Sbjct: 208 E-RPSLFCWNSMIYGYSQMYGPYKALQIFNRMPER----DEVSWNTLISIFSQHGFGVQC 262
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+F +M + G P+ SVLSACA S LK G H ++R + + D LI M
Sbjct: 263 LAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDM 322
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG A+R F ++ D WN++I+G G E A+ +F+ M++ V +
Sbjct: 323 YAKCGCLDLAKRVFKS--LREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEF 380
Query: 253 SFVAVLSACG-----------HAGHVDKAL--------QIFTMM----DDD-----FGLK 284
+L C H + + I TM D D F L
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440
Query: 285 PKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE--- 339
P + + M+ RSG + +AR +PE + ++S+L ++ + EE
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLST---YVQNGFSEEGLK 497
Query: 340 --MAMKLQEMEPE 350
++M+ ++P+
Sbjct: 498 LYVSMRSNGVQPD 510
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 151/350 (43%), Gaps = 70/350 (20%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN +T+ SV+SACAS L++G +H L++E D + G L+DMY KCGCL A V
Sbjct: 276 PNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRV 335
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ L+ +I +WN++I G++ G+
Sbjct: 336 FKSLREHDHI-SWNSLITGVV-----------------------------------HFGL 359
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A LF +M+ + +V + ++L C+ G+ HG+ I++ + + A
Sbjct: 360 GEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNA 419
Query: 189 LISMYMKCGQP----------------SW---------------ARRFFDQFEIKPDDPA 217
+I+MY KCG SW AR +FD + +
Sbjct: 420 IITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDM--MPERNIV 477
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
WN+M+S Y +NG E ++++ M+ V+P+ +F + AC V +Q+ T
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537
Query: 278 DDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
FGL +V + R G + EA+ + + + ++++L A
Sbjct: 538 -TKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAA 586
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 140/336 (41%), Gaps = 58/336 (17%)
Query: 55 MYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
MY CG A VFQE RNI TWNTMI ++ + R A +LF+ + D
Sbjct: 52 MYSNCGLTHDAFQVFQETH-HRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVR--VKDSV 108
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKM----QSTGMVPSLKCVTSVLSACADLSALKLGKET 170
+W +MISG+SQ G +F+ F M G TSV+ AC L +L +
Sbjct: 109 SWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQL 168
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H V + + + +++ MY+KCG A F F+I+ WN+MI GY +
Sbjct: 169 HALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF--FDIERPSLFCWNSMIYGYSQMY 226
Query: 231 EYESAVEIFDLMQQ-------------------------------EKVKPNSASFVAVLS 259
A++IF+ M + + PN ++ +VLS
Sbjct: 227 GPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLS 286
Query: 260 ACGHAGHVD-------KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
AC + + L++ +D FG ++D+ + G LD A+ + +
Sbjct: 287 ACASTSDLKWGAHLHARILRMEHSLDLVFG--------NGLIDMYAKCGCLDLAKRVFKS 338
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
L E ++SL+ ++ LGE+ + +M
Sbjct: 339 LREHDHISWNSLITGV---VHFGLGEDALILFNQMR 371
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ +TF + I ACA L ++ G QV K + + ++V MY +CG + A N
Sbjct: 508 QPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKN 567
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F + +++++WN M+A NG K ++ FE + KP+ ++ S++SG S +G
Sbjct: 568 TFDSID-DKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMG 626
Query: 128 MRFEAFKLFEKMQST-GMVPS---LKCVTSVL 155
+ E F+ M G+ P+ C+ +L
Sbjct: 627 LVAEGKHYFDSMTRVFGISPTNEHFSCMVDLL 658
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 201/386 (52%), Gaps = 42/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PNS T IS+++AC + L FGR +HG +K + + + TAL DMY+ CG
Sbjct: 455 KPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCG------- 507
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
A +LFEG D +WN+MI+ + +
Sbjct: 508 -------------------------DEATARDLFEGCPDR----DLISWNAMIASYVKNN 538
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA--DLNKDESM 185
+A LF +M S P+ + +VLS+ L+ L G+ H +V R L D S+
Sbjct: 539 QAHKALLLFHRMISEAE-PNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSL 597
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
A A I+MY +CG A F + + WNAMI+GYG NG A+ F M ++
Sbjct: 598 ANAFITMYARCGSLQSAENIFKTLPKR--NIISWNAMIAGYGMNGRGSDAMLAFSQMLED 655
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
+PN +FV+VLSAC H+G ++ LQ+F M DF + P+ H+ C+VDLL R G +DE
Sbjct: 656 GFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDE 715
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
ARE I +P EP SV+ +LL +C + ++ + + KL ++EP N +V+LSN+YA
Sbjct: 716 AREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVYAT 775
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G W +V RIR + ++ L K PGIS
Sbjct: 776 AGLWLEVRRIRTWLKEKGLRKPPGIS 801
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 51/358 (14%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT + + ACA L L+ G+Q+H L +K E D I AL++MY G L +H +F
Sbjct: 254 DCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLF 313
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+ + D WNSMIS ++ G
Sbjct: 314 ESVPNR------------------------------------DAPLWNSMISAYAAFGCH 337
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADL-SALKLGKETHGHVIRADLNKDESMATA 188
EA LF +MQS G+ + V +LS C +L S L GK H HVI++ + D S+ A
Sbjct: 338 EEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNA 397
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+SMY + ++ FD+ +K D WN MI RN A E+F+ M++ ++K
Sbjct: 398 LLSMYTELNCVESVQKIFDR--MKGVDIISWNTMILALARNTLRAQACELFERMRESEIK 455
Query: 249 PNSASFVAVLSACGHAGHVD--KALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
PNS + +++L+AC +D +++ + M ++ Q + D+ G A
Sbjct: 456 PNSYTIISILAACEDVTCLDFGRSIHGYVM---KHSIEINQPLRTALADMYMNCGDEATA 512
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM----EPENPTPFVILSN 360
R+L P+ + +++++ + ++ ++ + + M EP + T +LS+
Sbjct: 513 RDLFEGCPDRDLISWNAMIAS---YVKNNQAHKALLLFHRMISEAEPNSVTIINVLSS 567
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 146/322 (45%), Gaps = 44/322 (13%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
DE V +S+ AS L G+ +H +K + D +G AL+ MY + C+
Sbjct: 355 DERTVVIMLSMCEELASGLLK--GKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQ 412
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F +KG D +WN+MI ++
Sbjct: 413 KIFDRMKGV------------------------------------DIISWNTMILALARN 436
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+R +A +LFE+M+ + + P+ + S+L+AC D++ L G+ HG+V++ + ++ +
Sbjct: 437 TLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLR 496
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TAL MYM CG + AR D FE PD D WNAMI+ Y +N + A+ +F M E
Sbjct: 497 TALADMYMNCGDEATAR---DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISE 553
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD-FGLKPKQEHFGCMVDLLGRSGRLD 304
+PNS + + VLS+ H + + + + F L + + R G L
Sbjct: 554 -AEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQ 612
Query: 305 EARELIRELPEPTVSVYHSLLG 326
A + + LP+ + +++++
Sbjct: 613 SAENIFKTLPKRNIISWNAMIA 634
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 53/332 (15%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
E L PN+ T V+ ACA+ ++ G+ +H + D +GTA+VD Y KCG +
Sbjct: 45 ESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFV 104
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF + D WN+M+ G
Sbjct: 105 EDARCVFDAMSDR------------------------------------DVVLWNAMVYG 128
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NK 181
+ G EA L +M + P+ + + ++L AC S L+LG+ HG+ +R + +
Sbjct: 129 YVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDS 188
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+ +ATALI Y++ FD ++ + WNAMISGY G+Y A+E+F
Sbjct: 189 NPHVATALIGFYLRFDMRVLP-LLFDLMVVR--NIVSWNAMISGYYDVGDYFKALELFVQ 245
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQI------FTMMDDDFGLKPKQEHFGCMVD 295
M ++VK + + + + AC G + QI F ++D + L +++
Sbjct: 246 MLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNA-------LLN 298
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+ +G L+ + +L +P +++S++ A
Sbjct: 299 MYSNNGSLESSHQLFESVPNRDAPLWNSMISA 330
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 48/259 (18%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEK-QSDTMIGTALVDMYLKCG--CLPC 64
PNS T ++++ AC L+ GR VHG L+ S+ + TAL+ YL+ LP
Sbjct: 151 RPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLP- 209
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ +L RNI++WN MI+G G KA+ELF + + K D
Sbjct: 210 ---LLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFD------------ 254
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLS--ACADLSALKLGKETHGHVIRADLNKD 182
CVT +++ ACA+L +LKLGK+ H I+ + +D
Sbjct: 255 -------------------------CVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVED 289
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ AL++MY G + + F+ + D WN+MIS Y G +E A+++F M
Sbjct: 290 LYILNALLNMYSNNGSLESSHQLFES--VPNRDAPLWNSMISAYAAFGCHEEAMDLFIRM 347
Query: 243 QQEKVKPNSASFVAVLSAC 261
Q E VK + + V +LS C
Sbjct: 348 QSEGVKKDERTVVIMLSMC 366
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
DP WNS+I + L + +M+S G++P+ + VL ACA +A++ GK H
Sbjct: 17 DPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIH 76
Query: 172 GHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGE 231
+ DL D + TA++ Y KCG AR FD + D WNAM+ GY G
Sbjct: 77 RSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR--DVVLWNAMVYGYVGWGC 134
Query: 232 YESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
YE A+ + M +E ++PNS + VA+L AC
Sbjct: 135 YEEAMLLVREMGRENLRPNSRTMVALLLAC 164
>gi|242080213|ref|XP_002444875.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
gi|241941225|gb|EES14370.1| hypothetical protein SORBIDRAFT_07g000750 [Sorghum bicolor]
Length = 583
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 138/383 (36%), Positives = 202/383 (52%), Gaps = 40/383 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+S F SV ACA L L+ G VH + + SD + TALV +Y KCG L A +F
Sbjct: 107 SSFAFTSVAKACADLSALRAGMGVHAHAVLLGFGSDRFVQTALVVLYSKCGKLDVARKLF 166
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
++ R+++ W N+MISG+ Q G+
Sbjct: 167 DAIR-DRSVVAW-----------------------------------NAMISGYEQNGLA 190
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
A +++ +M+ G P + LSACA AL LG E ++ + + + AL
Sbjct: 191 GRAIEVYREMRVAGEAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAAL 250
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
++MY +CG + AR +FD + + + W +MI+GYG +G AV++FDLM+Q+ P
Sbjct: 251 VNMYARCGLVNKAREWFDMLQER--NVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPP 308
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
N +FVAVLSAC HAG V F M +GL P+ EH+ MVD+ GR+G LD+A +
Sbjct: 309 NDVTFVAVLSACAHAGLVSDGRDAFASMKSVYGLVPRAEHYCSMVDMYGRAGLLDDAMQF 368
Query: 310 IRE-LP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
I + +P EP V+ ++LGAC H N LG E+A +L +EPENP+ V+LSNIYA G+
Sbjct: 369 IHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIALEPENPSHRVLLSNIYALSGK 428
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
V ++R + R+L K G S
Sbjct: 429 MNHVEKVRNTMIKRRLKKPIGYS 451
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 39/266 (14%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
+ P+S TF++ +SACA L G +V L + + + ++G ALV+MY +CG + A
Sbjct: 205 EAPDSATFVATLSACAQAGALDLGHEVERLIVSERMEMNVVLGAALVNMYARCGLVNKAR 264
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F L+ RN++TW +MIAG ++G +A++LF+ + +G P+ T+ +++S +
Sbjct: 265 EWFDMLQ-ERNVVTWTSMIAGYGMHGHGGEAVKLFDLMRQQGPPPNDVTFVAVLSACAHA 323
Query: 127 GMRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ + F M+S G+VP + S
Sbjct: 324 GLVSDGRDAFASMKSVYGLVPRAEHYCS-------------------------------- 351
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD-LMQQ 244
++ MY + G A +F P W AM+ + + VE+ + L+
Sbjct: 352 ---MVDMYGRAGLLDDAMQFIHDSIPGEPGPEVWTAMLGACKMHKNFSLGVEVAERLIAL 408
Query: 245 EKVKPNSASFVA-VLSACGHAGHVDK 269
E P+ ++ + + G HV+K
Sbjct: 409 EPENPSHRVLLSNIYALSGKMNHVEK 434
>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 211/384 (54%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VT I V+SACA + L G+ +HG+ +K + + +L+++Y KCGCL
Sbjct: 137 KPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCL----- 191
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
E A LFEG++ + +WNSM++ +G
Sbjct: 192 ---------------------------EAACCLFEGMSVQSL----VSWNSMVAVHVHMG 220
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + F M+ G+ V S+L AC +L KL + HG+++ L+ + ++AT
Sbjct: 221 LAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIAT 280
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL+ +Y K G S + + F I PD A W AM+S Y +G A+E F+LM +E V
Sbjct: 281 ALLDLYAKLGTLSDSCKVFGGM-INPDAVA-WTAMLSSYAMHGRGREAIEHFELMVREGV 338
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ +F +LSAC H+G V++ F +M + +G++ + EH+ CMVDLLGRSG L++A
Sbjct: 339 VPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDAY 398
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+LI+ +P EP V+ +L+GAC N +LG+E+A +L ++P + ++ LSN+Y+ G
Sbjct: 399 KLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAAG 458
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W D ++R ++ +R L + PG S
Sbjct: 459 QWRDASKVRALMKERVLIRNPGCS 482
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 146/343 (42%), Gaps = 46/343 (13%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
I+ IS C+S+ Y R +H +K + IG LV Y++ GC
Sbjct: 43 ALITAISTCSSISYC---RALHCRVIKSVNYNHGFIGDQLVSSYVELGC----------- 88
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
++ A+ELF+ L + D +WNS+ISGFS+
Sbjct: 89 ---------------------TKDALELFDELPDK----DLVSWNSLISGFSRRADLGIC 123
Query: 133 FKLFEKMQ-STGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
L +M+ G+ P+ V V+SACA + L +GK HG +++ + + + +LI+
Sbjct: 124 LGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLIN 183
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
+Y KCG A F+ ++ WN+M++ + G E + F +M++ + +
Sbjct: 184 LYGKCGCLEAACCLFEGMSVQS--LVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQ 241
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIR 311
A+ V++L AC + G V K + + GL ++DL + G L ++ ++
Sbjct: 242 ATVVSLLLACENLG-VRKLAEAVHGYILNGGLDGNLAIATALLDLYAKLGTLSDSCKVFG 300
Query: 312 ELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ P + ++L + H G E + M E P
Sbjct: 301 GMINPDAVAWTAMLSSYAMH---GRGREAIEHFELMVREGVVP 340
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
SQL F AF + + V+++++A + S++ + H VI++
Sbjct: 25 SQLSPTFHAFSNVDSL-----------VSALITAISTCSSISYCRALHCRVIKSVNYNHG 73
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ L+S Y++ G A FD+ PD D WN++ISG+ R + + + M
Sbjct: 74 FIGDQLVSSYVELGCTKDALELFDEL---PDKDLVSWNSLISGFSRRADLGICLGLLFRM 130
Query: 243 QQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
+ E +KPN + + V+SAC G +D I + G+ + + +++L G+ G
Sbjct: 131 RFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKS-GMLLEVKVVNSLINLYGKCG 189
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEE 339
L+ A L + ++ ++S++ H++ L E+
Sbjct: 190 CLEAACCLFEGMSVQSLVSWNSMVAV---HVHMGLAEK 224
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 128/387 (33%), Positives = 215/387 (55%), Gaps = 7/387 (1%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P++ T S++SACA+L L G+Q+H L+ E ++ +G AL+ MY K G + A
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 66 HNVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+ + + S NI+ + +++ G G + A E+F L D W +MI G+
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR----DVVAWTAMIVGYV 385
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q G+ +A +LF M + G P+ + ++LS + L+ L+ GK+ H I+A + S
Sbjct: 386 QNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPS 445
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+ ALI+MY K G + A+R FD K + + W +MI ++G + A+ +F+ M
Sbjct: 446 VTNALIAMYAKTGNINVAKRVFDLPNGKKEIVS-WTSMIMALAQHGLGKEAINLFERMLS 504
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+KP+ ++V VLSAC H G V++ + + MM + ++P H+ CM+DL GR+G L
Sbjct: 505 VGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQ 564
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA I +P EP + SLL +C H N+DL + A +L ++P N ++ L+N+Y+
Sbjct: 565 EAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYS 624
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G+WE+ + R+++ DR + K GIS
Sbjct: 625 ACGKWENAAQTRKLMKDRGVRKEKGIS 651
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 189/394 (47%), Gaps = 57/394 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +V+S+CA+ L GR++H +K+ S + T+L++MY KCG A V
Sbjct: 140 PSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVV 199
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +NI TWN +I+ M +G+ E A FE + D +WNSMISG+SQ G
Sbjct: 200 FDRMT-VKNISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNSMISGYSQQGY 254
Query: 129 RFEAFKLFEKMQSTGMVPSLK----CVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
EA +F KM + PSLK + S+LSACA+L L +GK+ H +++RA+ +
Sbjct: 255 NLEALAIFSKMLNE---PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGA 311
Query: 185 MATALISMYMKCGQPSWAR-----------------RFFDQF----EIKPDDPAF----- 218
+ ALISMY K G AR D + +KP F
Sbjct: 312 VGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRD 371
Query: 219 -----WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
W AMI GY +NG + A+E+F LM E +PNS + A+LS ++ QI
Sbjct: 372 RDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQI 431
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP--EPTVSVYHSLLGACWCH 331
G ++ + ++G ++ A+ + +LP + + + S++ A H
Sbjct: 432 HASAIKA-GESSTPSVTNALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQH 489
Query: 332 LNSDLGEEMAMKLQE------MEPENPTPFVILS 359
LG+E A+ L E M+P++ T +LS
Sbjct: 490 ---GLGKE-AINLFERMLSVGMKPDHITYVGVLS 519
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 189/414 (45%), Gaps = 51/414 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQF-GRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
+ + P S F + I + + F GR VH +K + L+ Y K G L
Sbjct: 3 VGNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLR 62
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
AH+VF E+ ++ +WNT+I+G G E + L +E DP +W ++I G+
Sbjct: 63 FAHHVFDEMP-LKSTFSWNTLISGYAKQGNFEVSRRLL----YEMPDCDPVSWTAIIVGY 117
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+Q G+ A +F KM S + PS V++VLS+CA L +G++ H V++ L
Sbjct: 118 NQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCV 177
Query: 184 SMATALISMYMKCGQPSWARRFFD----------------------------QFEIKPD- 214
+AT+L++MY KCG P A+ FD QFE PD
Sbjct: 178 PVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDR 237
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQI 273
D WN+MISGY + G A+ IF M E +KP++ + ++LSAC + ++ QI
Sbjct: 238 DIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQI 297
Query: 274 FTMMDDDFGLKPKQEHFG----CMVDLLGRSGRLDEARELIRELPEPTVSV--YHSLLGA 327
+ L+ + E G ++ + +SG ++ AR ++ +++ + SLL
Sbjct: 298 HAYI-----LRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDG 352
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRI-RQMIND 380
N E+ KL++ + T ++ Y G W D + R M+N+
Sbjct: 353 YTKLGNVKPAREIFNKLRDRDVVAWTAMIVG---YVQNGLWNDALELFRLMVNE 403
>gi|125539877|gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/380 (34%), Positives = 213/380 (56%), Gaps = 15/380 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T +S SACA L + R++HG + + ++ A+VD Y K G + A +F ++
Sbjct: 172 TVVSAASACAGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGLFDQM 231
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
R+ ++W +MIAG + A+++F+ + + D W ++ISG Q G A
Sbjct: 232 T-IRDSVSWTSMIAGYCRASMLDDAVQVFDMMPAQ----DAIAWTALISGHEQNGEEEIA 286
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES---MATAL 189
+LFE+M G+VP+ + S L ACA + + GKE HG ++R + D + AL
Sbjct: 287 LELFERMTGEGVVPTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNAL 346
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
I MY KCG A FD+ + D WN+M++G+ NG+ + ++ +F+ M +++V+P
Sbjct: 347 IDMYSKCGDMVAAMAVFDR--MLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQP 404
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+AVL+AC HAG V +I M D G++P+ EH+ +D LGR+ +L+EA E
Sbjct: 405 TYVTFLAVLTACSHAGLVSDGRRILESMQD-HGVEPRAEHYAAFIDALGRNHQLEEASEF 463
Query: 310 IRELPEP----TVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
I+ L T + +LLGAC H N ++ EE+A L ++EPEN +V+LSNIY+
Sbjct: 464 IKGLSSKIGLGTTGSWGALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAA 523
Query: 366 GRWEDVGRIRQMINDRQLTK 385
G+W+D ++R ++ + L K
Sbjct: 524 GQWDDARQVRALMKGKGLRK 543
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSD---TMIGTALVDMYLKCGCLPCA 65
P +S + ACA + + G++VHG L+ SD I AL+DMY KCG + A
Sbjct: 300 PTPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAA 359
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF + R+I++WN+M+ G NG+ ++++ +FE + + +P T+ ++++ S
Sbjct: 360 MAVFDRML-ERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSH 418
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE-THGHVIRADLNKDES 184
G+ + ++ E MQ G+ P + + + A L+ E G + L S
Sbjct: 419 AGLVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNHQLEEASEFIKGLSSKIGLGTTGS 478
Query: 185 MATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
L + ++ G A + F+++P++ + + + Y G+++ A ++ LM+
Sbjct: 479 WGALLGACHVH-GNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMK 537
Query: 244 QEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDF 281
+ ++ + A + H D +A +I+ M+D F
Sbjct: 538 GKGLRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLF 580
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 122/298 (40%), Gaps = 61/298 (20%)
Query: 60 GCLPCAHNVFQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
G LP A + + SRN++++NT+I+ + +GR +A+ +F LA +
Sbjct: 110 GTLPDALRLLDGMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARD----------- 158
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
G Q + + F V S SACA L + +E HG V+ +
Sbjct: 159 --RGLGQQQVAIDRF----------------TVVSAASACAGLRDARHLRELHGAVVVSG 200
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIK-------------------------- 212
+ MA A++ Y K G+ AR FDQ I+
Sbjct: 201 MEVTVIMANAMVDAYSKAGRVEDARGLFDQMTIRDSVSWTSMIAGYCRASMLDDAVQVFD 260
Query: 213 ---PDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
D W A+ISG+ +NGE E A+E+F+ M E V P + V+ L AC G V +
Sbjct: 261 MMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVPTPFALVSCLGACAKVGLVAR 320
Query: 270 ALQIFT-MMDDDFGLKPKQEHF-GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
++ ++ G P ++D+ + G + A + + E + ++S++
Sbjct: 321 GKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAMAVFDRMLERDIISWNSMV 378
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 207/389 (53%), Gaps = 39/389 (10%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C +P++ T IS++S+C L +G +HG ++ SD + L+ MY +CG +
Sbjct: 249 CDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDI- 307
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A LF+G++ +W +MISG+
Sbjct: 308 -------------------------------SSATILFDGMSIR----TCVSWTAMISGY 332
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
S++G +A LF M+ TG P + V S++S C AL LG + +L KD
Sbjct: 333 SEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDV 392
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ ALI MY KCG + AR F + + W AMI+ NGE+ A+++F L+
Sbjct: 393 VVCNALIDMYAKCGSLNDAREIF--YSLPNRTVVSWTAMIAACALNGEFREALDLFSLLS 450
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ ++PN+ +F+AVL AC H G+++K + F MM + +G+ P +H+ CM+DLLGR G+L
Sbjct: 451 ESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKL 510
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA E+I+++P +P ++ +LLGAC H N ++GE ++ L E++P FV ++NIY
Sbjct: 511 IEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIY 570
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGISA 391
A +GRW++V +R+ + Q+ K PG S
Sbjct: 571 ASVGRWDEVAAMRKTMRSNQMRKSPGKSV 599
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 49/358 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P++ T I + A S L+F + VH + ++ +DT + + Y KCG L A
Sbjct: 150 RPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKM 209
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF G+ RS +WNS+I+ ++ G
Sbjct: 210 VFH----------------GIQKTARSS------------------VSWNSLIACYAHFG 235
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A K ++ + G P + S+LS+C AL G HGH + + D S+
Sbjct: 236 KYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLIN 295
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LISMY +CG S A FD I+ W AMISGY G + A+ +F+ M++
Sbjct: 296 TLISMYSRCGDISSATILFDGMSIRT--CVSWTAMISGYSEVGRVDDALVLFNAMEETGE 353
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP-KQEHFGC--MVDLLGRSGRLD 304
KP+ + ++++S CG G AL + +D+ L K++ C ++D+ + G L+
Sbjct: 354 KPDIVTVLSLISGCGKTG----ALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLN 409
Query: 305 EARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAM--KLQE--MEPENPTPFVIL 358
+ARE+ LP TV + +++ A C LN + E + + L E +EP N T +L
Sbjct: 410 DAREIFYSLPNRTVVSWTAMIAA--CALNGEFREALDLFSLLSESGIEPNNITFLAVL 465
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ TF + ACA L +L + +H +K SD + TA+VDMY+KCG + A+N
Sbjct: 49 QPNNFTFPFLSKACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYN 108
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ RNI A+WN+MI GFSQ+G
Sbjct: 109 LFDKMP-VRNI-----------------------------------ASWNAMIIGFSQIG 132
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
F LF M+ G P V + A +L+ K H I L+ D S++
Sbjct: 133 SLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSN 192
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
I+ Y KCG+ A+ F + WN++I+ Y G+Y AV+ + + +
Sbjct: 193 TWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGF 252
Query: 248 KPNSASFVAVLSAC 261
KP++++ +++LS+C
Sbjct: 253 KPDASTIISLLSSC 266
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI 175
WNS I G G +A LF +++ G+ P+ + ACA LS L + H HV+
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 176 RADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESA 235
++ D + TA++ MY+KCG+ A FD+ ++ + A WNAMI G+ + G +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR--NIASWNAMIIGFSQIGSLDRV 137
Query: 236 VEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVD 295
+F M+ +P++A+ + + A A + + L+ + + GL +
Sbjct: 138 FNLFMGMRLVGTRPDAATVIGLTRAVISAKSL-RFLKAVHAIGIETGLDADTSVSNTWIA 196
Query: 296 LLGRSGRLDEAREL---IRELPEPTVSVYHSLLGACWCHL 332
+ G L A+ + I++ +VS ++SL+ AC+ H
Sbjct: 197 AYSKCGELQLAKMVFHGIQKTARSSVS-WNSLI-ACYAHF 234
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 24/297 (8%)
Query: 7 DEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
++P+ VT +S+IS C L G + E + D ++ AL+DMY KCG L A
Sbjct: 353 EKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAR 412
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F L +R +++W MIA LNG +A++LF L+ G +P+ T+ +++
Sbjct: 413 EIFYSLP-NRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHG 471
Query: 127 GMRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD--LNKDE 183
G + + F M + G+ P L + ++ DL K GK + D + DE
Sbjct: 472 GYLEKGRECFMMMTERYGINPGLDHYSCMI----DLLGRK-GKLIEALEVIQDMPMKPDE 526
Query: 184 SMATAL-----ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ AL I M+ G+ + R+ FE++P + M + Y G ++ +
Sbjct: 527 GIWGALLGACKIHNNMEIGE--YVSRYL--FELQPRVAVSFVEMANIYASVGRWDEVAAM 582
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVD-----KALQIFTMMDDDFGLKPKQEHF 290
M+ +++ + V ++ H V+ +L I+ + + ++ KQ+ F
Sbjct: 583 RKTMRSNQMRKSPGKSVVQVNGMSHVFFVEDRSHHDSLLIYEAL-GNLAMQMKQKEF 638
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 218 FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT-M 276
+WN+ I G G A+ +F ++ ++PN+ +F + AC H+ + I T +
Sbjct: 19 WWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHV 78
Query: 277 MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL 325
+ F + MVD+ + G++D+A L ++P ++ +++++
Sbjct: 79 VKSPFYSDIYVQ--TAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMI 125
>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g04840-like [Cucumis sativus]
Length = 679
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 213/417 (51%), Gaps = 41/417 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +TF V+ + A+L GR +H LK + D+ + +LVDMY+K L A V
Sbjct: 138 PDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKV 197
Query: 69 FQELKGSR---NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F E S ++L WN +I G G KA ELF+ + K D +WNS+I+GF +
Sbjct: 198 FDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMP----KKDTGSWNSLINGFMK 253
Query: 126 LGMRFEAFKLFEKMQSTGMV-------------------------------PSLKCVTSV 154
+G A +LF KM +V P+ + S
Sbjct: 254 MGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSA 313
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
LSACA + AL G H ++ + + TAL+ MY KCG A + F E K
Sbjct: 314 LSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH--ETKEK 371
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
W+ MI G+ +G + A++ F+ M+ KP+S F+AVL+AC H+G V++ L+ F
Sbjct: 372 GLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFF 431
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
M + ++P +H+ +VD+LGR+GRLDEA + IR +P P V+ +L AC H N
Sbjct: 432 DNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCACRTHKN 491
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
++ E + KL ++EP++P +V LSN YA +GRW+D R+R + D K PG S
Sbjct: 492 VEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPGWS 548
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 156/381 (40%), Gaps = 44/381 (11%)
Query: 14 FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELK 73
FI +I A S L RQ+HG + S + + T + + A ++FQ +
Sbjct: 45 FIDLIHASNSTHKL---RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFE 101
Query: 74 GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW----------------N 117
+N +N +I G+ N R E ++ F + PD T+
Sbjct: 102 -LKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGR 160
Query: 118 SMISGFSQLGMRFEAF------KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETH 171
++ G + G+ F++F ++ K++ G +LK + + S L H
Sbjct: 161 ALHCGILKFGLEFDSFVRVSLVDMYVKVEELG--SALKVFDESPESVKNGSVLIWNVLIH 218
Query: 172 GHVIRADL-----------NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWN 220
G+ DL KD +LI+ +MK G A+ F ++ + W
Sbjct: 219 GYCRMGDLVKATELFDSMPKKDTGSWNSLINGFMKMGDMGRAKELF--VKMPEKNVVSWT 276
Query: 221 AMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
M++G+ +NG+ E A+E F M +E +PN + V+ LSAC G +D L+I + +
Sbjct: 277 TMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN 336
Query: 281 FGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLL--GACWCHLNSDLGE 338
G K +VD+ + G ++ A ++ E E + ++ ++ A H L
Sbjct: 337 -GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQY 395
Query: 339 EMAMKLQEMEPENPTPFVILS 359
MK +P++ +L+
Sbjct: 396 FEWMKFTGTKPDSVVFLAVLN 416
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 168 KETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYG 227
++ HG + R ++ + T IS +A F +FE+K + +NA+I G
Sbjct: 59 RQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELK--NSYLFNALIRGLA 116
Query: 228 RNGEYESAVEIFDLMQQEKVKPNSASFVAVL--SACGHAGHVDKALQIFTMMDDDFGLKP 285
N +ES++ F LM + K+ P+ +F VL +A G V +AL + FGL+
Sbjct: 117 ENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGIL---KFGLEF 173
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEP----TVSVYHSLLGACWCHLNSDLGEEMA 341
+VD+ + L A ++ E PE +V +++ L+ +C + DL + A
Sbjct: 174 DSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHG-YCRM-GDLVK--A 229
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
+L + P+ T +++ G + D+GR +++
Sbjct: 230 TELFDSMPKKDTG--SWNSLINGFMKMGDMGRAKELF 264
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/447 (31%), Positives = 222/447 (49%), Gaps = 68/447 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
E + VT IS+I C L G +HG +K D + AL+ MY CG +
Sbjct: 556 ELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKF 615
Query: 68 VFQELKGSRNILTWNTMIAGM-------------------------------------ML 90
+F E+ R+I++WN +I G +L
Sbjct: 616 LF-EVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLL 674
Query: 91 NGRSEKAMELFEGLAHE--------------------------GFKPDPATWNSMISGFS 124
G+S A + G+ E G K D A WN+++S +
Sbjct: 675 QGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYV 734
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES 184
Q E+ F ++ + P S++SAC LS+L L +VI+ +K
Sbjct: 735 QTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIV 794
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
++ ALI ++ +CG S A++ F+ K D W+ MI+GYG +G+ E+A+ + M+
Sbjct: 795 ISNALIDLFARCGNISIAKKIFEGLSSK--DAVSWSTMINGYGLHGDSEAALALLSQMRL 852
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+KP+ ++ +VLSAC H G +D+ IF M ++ G+ + EH+ CMVDLLGR+G+L+
Sbjct: 853 SGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLN 911
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
EA + + +LP +P+VS+ SLLGAC H N LGE+++ L E++P+N +V+L NIYA
Sbjct: 912 EAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYA 971
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
GRW D R+R + +RQL K+PG S
Sbjct: 972 AAGRWMDANRVRSDMEERQLRKIPGFS 998
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 149/324 (45%), Gaps = 46/324 (14%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C SD+ TF VI AC +L + VH + L+ + + +I TALVD Y K
Sbjct: 151 CPSDD---FTFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAK----- 202
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
GR KA + + ++ +PD TWN++ISG+
Sbjct: 203 ---------------------------TGRMVKARLVLDKIS----QPDLVTWNALISGY 231
Query: 124 SQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
S G E F++ ++ G+ P++ S++ C + L +GK HG V+++ + DE
Sbjct: 232 SLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDE 291
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ ALISMY G AR FD K + WN+MIS Y +N + A ++F M
Sbjct: 292 FLTPALISMYAGGGNLFIARDLFDSAAEK--NVVIWNSMISAYAQNQKSSEAFKMFQQML 349
Query: 244 QEKVKPNSASFVAVLSACGHAGHV--DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
+ ++PN +FV+++ C ++ + K+L M + L + ++ + + G
Sbjct: 350 KANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVM---KYRLDSQLSVATALLSMYAKLG 406
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
L+ A + ++P + ++S++
Sbjct: 407 DLNSADFIFYQMPRRNLLSWNSMI 430
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 162/362 (44%), Gaps = 57/362 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN VTF+S+I C + +G+ +H +K S + TAL+ MY K G L A
Sbjct: 354 QPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADF 413
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ RN+L+WN SMISG+ G
Sbjct: 414 IFYQMP-RRNLLSWN-----------------------------------SMISGYGHNG 437
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + F MQ G P + ++LSAC+ L A+ LGK H R + + + +++
Sbjct: 438 LWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISN 497
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL++ Y CG+ S + + F + ++ + WN +ISG NG+ + AV + MQQEK+
Sbjct: 498 ALLAFYSDCGKLSSSFKLFQKMPLR--NAISWNTLISGCVHNGDTKKAVALLHKMQQEKM 555
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG-------RS 300
+ + + ++++ C A ++ + + + + +K F C V L+
Sbjct: 556 ELDLVTLISIIPICRVAENLIQGMTL-----HGYAIKTG---FACDVSLVNALISMYFNC 607
Query: 301 GRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP-FVILS 359
G ++ + L +P ++ +++L+ H L E+ +M E P +V L
Sbjct: 608 GDINAGKFLFEVMPWRSIVSWNALITGYRFHY---LQNEVMASFCQMIREGQKPNYVTLL 664
Query: 360 NI 361
N+
Sbjct: 665 NL 666
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G E A+ FE + KP N MI G+ + ++ K + G
Sbjct: 103 GAPELALSAFEAIE----KPSVFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTF 158
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
V+ AC L A+ + + H V+R ++ + TAL+ Y K G+ AR D+ I
Sbjct: 159 PFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDK--I 216
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVD--K 269
D WNA+ISGY NG + E+ + + +KPN ++F +++ C +D K
Sbjct: 217 SQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGK 276
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
++ F + G + ++ + G L AR+L E V +++S++ A
Sbjct: 277 SIHGFVVKS---GFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISA-- 331
Query: 330 CHLNSDLGEEMAMKLQEMEPENPTPFVI 357
+ + E Q+M N P V+
Sbjct: 332 -YAQNQKSSEAFKMFQQMLKANMQPNVV 358
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 206/383 (53%), Gaps = 43/383 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF +V++AC +L L+ G++VH + + ++ ++LVDMY KCG + + +
Sbjct: 261 PDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRI 320
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ +W++++ G+ Q G
Sbjct: 321 FDRMPIKNSV------------------------------------SWSALLGGYCQNGD 344
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++F KM+ L C ++L CA L+A++ GKE H IR +D + +A
Sbjct: 345 FKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESA 400
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y KCG +A+ FDQ ++ + WN+MI G+ +NG E A+ IF+ M +E +K
Sbjct: 401 LVDLYAKCGCIEYAQTIFDQMPVR--NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIK 458
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF+ +L AC H G VD+ + F M D+G+K EH+ CMVDLLGR+G L+EA
Sbjct: 459 PDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEI 518
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI S++ +LLGAC N ++ E +A ++ E+EP+ +V+L+N+Y +GR
Sbjct: 519 LIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGR 578
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D RIR+++ DR + K+PG S
Sbjct: 579 WNDALRIRRLMKDRGVNKMPGKS 601
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 154/348 (44%), Gaps = 47/348 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ T +VI AC+ L L+ GR HG+ L S+ +I +AL+DM+ + L A
Sbjct: 158 EPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQ 217
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL +PD W S+IS ++
Sbjct: 218 LFDEL------------------------------------LEPDAICWTSIISALTRND 241
Query: 128 MRFEAFKLFEKMQST-GMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
EA + F MQ GM P +VL+AC +L LK GKE H VI + +
Sbjct: 242 FFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVE 301
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
++L+ MY KCG ++R FD+ IK + W+A++ GY +NG+++S ++IF M+
Sbjct: 302 SSLVDMYGKCGSVGESQRIFDRMPIK--NSVSWSALLGGYCQNGDFKSVIQIFRKME--- 356
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
K + F +L C V + ++ G + +VDL + G ++ A
Sbjct: 357 -KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVDLYAKCGCIEYA 414
Query: 307 RELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ + ++P + ++S++G + GEE +M E P
Sbjct: 415 QTIFDQMPVRNLITWNSMIGG---FAQNGRGEEALRIFNQMVKEGIKP 459
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 42/355 (11%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V + S++ C +L G Q+H +K + D +G +L+ +Y K G F E
Sbjct: 60 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG------TDFPE 113
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ ++F+GL F D +W SMISG+ ++G
Sbjct: 114 TR-------------------------KVFDGL----FVKDVISWTSMISGYVRVGKPMN 144
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ +LF KM + G+ P+ +++V+ AC++L LKLG+ HG V+ + + +A+ALI
Sbjct: 145 SLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 204
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPN 250
M+ + AR+ FD E+ D W ++IS RN ++ A+ F MQ++ + P+
Sbjct: 205 MHGRNCALDDARQLFD--ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 262
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F VL+ACG+ G + + ++ + G +VD+ G+ G + E++ +
Sbjct: 263 GFTFGTVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVVESSLVDMYGKCGSVGESQRIF 321
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+P + +LLG +C N D + + ++ME + F + AGL
Sbjct: 322 DRMPIKNSVSWSALLGG-YCQ-NGDFKSVIQI-FRKMEKVDLYCFGTILRTCAGL 373
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 214/442 (48%), Gaps = 61/442 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN TF V+ +C + L G QVH +K + + +GT L+DMY G + A+
Sbjct: 196 RPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYK 255
Query: 68 VFQE------------------------------LKGSRNILTWNTMIAGMMLNGRSEKA 97
+F E L R+++ WN M++G + G +A
Sbjct: 256 IFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEA 315
Query: 98 MELF---------------------------EGLAHEGFKPDPATWNSMISGFSQLGMRF 130
+LF EGL E + + +WN++I G++ G+ F
Sbjct: 316 RKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFF 375
Query: 131 EAFKLFEKMQSTGMVP-SLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
E F++M S VP + + +VLSACA L AL LGK H + + L + + AL
Sbjct: 376 EVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNAL 435
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ MY KCG A F + K D WN +I G + A+ +F M+ KP
Sbjct: 436 MDMYAKCGIIENAISVFRGMDTK--DLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKP 493
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+ +F+ +L AC H G V+ F M DD+ + P+ EH+GCMVD+L R+GRL++A
Sbjct: 494 DGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAF 553
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
+R++P E ++ LLGAC + N +L E +L E+EP+NP +V+LSNIY GRW
Sbjct: 554 VRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRW 613
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
EDV R++ + D KLPG S
Sbjct: 614 EDVARLKVAMRDTGFKKLPGCS 635
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 93 RSEKAMELFEGLAHEGFKPDP--ATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC 150
R A +LF+ + PDP A WNSM G++Q E LF +M+ + P+
Sbjct: 148 RMTYARQLFDQI------PDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFT 201
Query: 151 VTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFF-DQF 209
VL +C ++AL G++ H +I+ + + T LI MY G A + F + F
Sbjct: 202 FPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMF 261
Query: 210 EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDK 269
E + W +MI+GY + + SA +FDL + V + ++S G + +
Sbjct: 262 E---RNVVAWTSMINGYILSADLVSARRLFDLAPERDV----VLWNIMVSGYIEGGDMVE 314
Query: 270 ALQIFTMMDDDFGLKPKQE--HFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
A ++F M P ++ + ++ +G ++ L E+PE + +++L+G
Sbjct: 315 ARKLFXEM-------PNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGG 367
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ ++ L E+ + M E+ P
Sbjct: 368 ---YAHNGLFFEVLGSFKRMLSESDVP 391
>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 202/384 (52%), Gaps = 37/384 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ +F ++ +CA Q G H +K+ + D ++ T L+D Y K G + A N+
Sbjct: 28 PSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKHGYVEEARNL 87
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN + TWN+MIS + Q G
Sbjct: 88 FDNMT-ERN---------------------------------SNSVTWNTMISAYVQCGE 113
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A +F++MQS + P+ + S+LSACA L AL +G+ HG++ L D + A
Sbjct: 114 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 173
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG A F K + WN++I G G NG E A+ F +M++E +K
Sbjct: 174 LIDMYCKCGALEAAIDVFHGLSRK--NIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIK 231
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +FV +LS C H+G + + F+ M +GL+P EH+GCMVDLLGR+G L EA E
Sbjct: 232 PDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALE 291
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LIR +P +P V SLL AC H ++ LGE++ +L E++P + +V LSN+YA L R
Sbjct: 292 LIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSR 351
Query: 368 WEDVGRIRQMINDRQLTKLPGISA 391
W+DV R+++ R + K PG S+
Sbjct: 352 WDDVNTCRKLMIKRGVHKTPGCSS 375
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT +S++SACA L L G +HG + D ++G AL+DMY KCG L A +
Sbjct: 130 KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 189
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L +NI WN++I G+ +NGR E+A+ F + EG KPD T+ ++SG S G
Sbjct: 190 VFHGLS-RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 248
Query: 128 MRFEAFKLFEKMQST-GMVPSLK 149
+ + F +M G+ P ++
Sbjct: 249 LLSAGQRYFSEMLGVYGLEPGVE 271
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 4/220 (1%)
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+ M ++PS + +L +CA +LG+ H +++ D + T L+ Y
Sbjct: 17 FYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA 76
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
K G AR FD + + WN MIS Y + GE+ +A+ +F MQ E VKP +
Sbjct: 77 KHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTM 136
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
V++LSAC H G +D I + LK ++D+ + G L+ A ++ L
Sbjct: 137 VSLLSACAHLGALDMGEWIHGYIRTK-RLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS 195
Query: 315 EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ ++S++ + GEE ME E P
Sbjct: 196 RKNIFCWNSIIVGLGM---NGRGEEAIAAFIVMEKEGIKP 232
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 206/383 (53%), Gaps = 43/383 (11%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF +V++AC +L L+ G++VH + + ++ ++LVDMY KCG + + +
Sbjct: 320 PDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRI 379
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++ +W++++ G+ Q G
Sbjct: 380 FDRMPIKNSV------------------------------------SWSALLGGYCQNGD 403
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
++F KM+ L C ++L CA L+A++ GKE H IR +D + +A
Sbjct: 404 FKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESA 459
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ +Y KCG +A+ FDQ ++ + WN+MI G+ +NG E A+ IF+ M +E +K
Sbjct: 460 LVDLYAKCGCIEYAQTIFDQMPVR--NLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIK 517
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ SF+ +L AC H G VD+ + F M D+G+K EH+ CMVDLLGR+G L+EA
Sbjct: 518 PDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEI 577
Query: 309 LIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
LI S++ +LLGAC N ++ E +A ++ E+EP+ +V+L+N+Y +GR
Sbjct: 578 LIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGR 637
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
W D RIR+++ DR + K+PG S
Sbjct: 638 WNDALRIRRLMKDRGVNKMPGKS 660
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 154/347 (44%), Gaps = 45/347 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN+ T +VI AC+ L L+ GR HG+ L S+ +I +AL+DM+ + L A
Sbjct: 217 EPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQ 276
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F EL + + W ++I+ + N ++A+ F
Sbjct: 277 LFDELL-EPDAICWTSIISALTRNDFFDEALRFF-------------------------- 309
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ + GM P +VL+AC +L LK GKE H VI + + +
Sbjct: 310 --------YSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVES 361
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG ++R FD+ IK + W+A++ GY +NG+++S ++IF M+
Sbjct: 362 SLVDMYGKCGSVGESQRIFDRMPIK--NSVSWSALLGGYCQNGDFKSVIQIFRKME---- 415
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
K + F +L C V + ++ G + +VDL + G ++ A+
Sbjct: 416 KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE-SALVDLYAKCGCIEYAQ 474
Query: 308 ELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
+ ++P + ++S++G + GEE +M E P
Sbjct: 475 TIFDQMPVRNLITWNSMIGG---FAQNGRGEEALRIFNQMVKEGIKP 518
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 42/355 (11%)
Query: 12 VTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQE 71
V + S++ C +L G Q+H +K + D +G +L+ +Y K G F E
Sbjct: 119 VLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLG------TDFPE 172
Query: 72 LKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFE 131
+ ++F+GL F D +W SMISG+ ++G
Sbjct: 173 TR-------------------------KVFDGL----FVKDVISWTSMISGYVRVGKPMN 203
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALIS 191
+ +LF KM + G+ P+ +++V+ AC++L LKLG+ HG V+ + + +A+ALI
Sbjct: 204 SLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALID 263
Query: 192 MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK-VKPN 250
M+ + AR+ FD E+ D W ++IS RN ++ A+ F MQ++ + P+
Sbjct: 264 MHGRNCALDDARQLFD--ELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD 321
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+F VL+ACG+ G + + ++ + G +VD+ G+ G + E++ +
Sbjct: 322 GFTFGTVLTACGNLGRLKQGKEVHAKVITT-GFCGNVVVESSLVDMYGKCGSVGESQRIF 380
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+P + +LLG +C N D + + ++ME + F + AGL
Sbjct: 381 DRMPIKNSVSWSALLGG-YCQ-NGDFKSVIQI-FRKMEKVDLYCFGTILRTCAGL 432
>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
lyrata]
Length = 1305
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/410 (32%), Positives = 216/410 (52%), Gaps = 38/410 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ + S++ A ++ G+ +HG ++ + D + T L+DMY+K G LP A
Sbjct: 759 KPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARM 818
Query: 68 VFQ---------------------------------ELKGSR-NILTWNTMIAGMMLNGR 93
VF E +G + N +TWN++++G G+
Sbjct: 819 VFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGK 878
Query: 94 SEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
+EKA+ + + G +P+ +W +++SG S+ G K+F KMQ G+ P+ ++S
Sbjct: 879 TEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISS 938
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L LS L GKE H ++ +L +D +ATAL+ MY K G A F + KP
Sbjct: 939 LLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKP 998
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
A WN MI GY E + +F+ M + ++P++ +F +VLS C ++G V + +
Sbjct: 999 --LASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKY 1056
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHL 332
F +M +G+ P EH CMV+LLGRSG LDEA + IR +P +P +++ + L +C H
Sbjct: 1057 FDLMRSHYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHR 1116
Query: 333 NSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQ-MINDR 381
+ +L E +LQ +EP N ++++ N+Y+ L RW DV RIR M N+R
Sbjct: 1117 DLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNR 1166
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 157/319 (49%), Gaps = 35/319 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + ++ C++ GRQ+HG L++ +S+ + +L+ MY + G L + VF +
Sbjct: 628 TMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLESSRKVFNSM 687
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
RN+ +WN++++ G + AM L + + G KPD TWNS++SG++ + +A
Sbjct: 688 V-DRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDA 746
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+ +++Q G+ P+ ++S+L A + +KLGK HG+VIR L D + T LI M
Sbjct: 747 IAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDM 806
Query: 193 YMKCGQPSWARRFFDQFEIK---------------------------------PDDPAFW 219
Y+K G +AR FD + K + W
Sbjct: 807 YIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTW 866
Query: 220 NAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDD 279
N+++SGY G+ E A+ + M++ V+PN S+ A+LS C G+ L+IF M +
Sbjct: 867 NSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQE 926
Query: 280 DFGLKPKQEHFGCMVDLLG 298
+ G+ P ++ +LG
Sbjct: 927 E-GVSPNSATISSLLRILG 944
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 40/293 (13%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHG-LTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ V V CA L+Y G +HG L + SDT + +AL+ Y +C L A+ +
Sbjct: 523 DEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKI 582
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+ L WN ++ + +G EK
Sbjct: 583 FDEMP-KRDDLAWNEIVMVNLQSGNWEK-------------------------------- 609
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A KLF M+ +G + +L C++ G++ HG+V+R + SM +
Sbjct: 610 ---AVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNS 666
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY + G+ +R+ F+ + + + WN+++S Y R G + A+ + D M+ +K
Sbjct: 667 LIVMYSRNGKLESSRKVFNSMVDR--NLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLK 724
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
P+ ++ ++LS A+ + + GLKP ++ + G
Sbjct: 725 PDIVTWNSLLSGYASKALSRDAIAVLKRIQIA-GLKPNTSSISSLLQAVYEPG 776
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 24/251 (9%)
Query: 9 PNSVTFISV--ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAH 66
PNS T S+ I C SLLY G++VH LK D + TALVDMY K G L A
Sbjct: 931 PNSATISSLLRILGCLSLLY--SGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAA 988
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+F +K ++ + +WN MI G + R E+ + +F + G +PD T+ S++S
Sbjct: 989 EIFWGIK-NKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNS 1047
Query: 127 GMRFEAFKLFEKMQS-TGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G+ E +K F+ M+S G++P+++ C+ +L L E + L D
Sbjct: 1048 GLVREGWKYFDLMRSHYGVIPTIEHCSCMVELLGRSGYLD------EAWDFIRTMPLKPD 1101
Query: 183 ESMATALIS-----MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
++ A +S ++ + +W R ++P + A + MI+ Y +
Sbjct: 1102 ATIWGAFLSSCKIHRDLELAEIAWKRLQV----LEPHNSANYMMMINLYSNLNRWGDVER 1157
Query: 238 IFDLMQQEKVK 248
I + M +V+
Sbjct: 1158 IRNSMSNNRVR 1168
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 105/222 (47%), Gaps = 5/222 (2%)
Query: 108 GFKPDPATWNSMISGFSQLGM-RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKL 166
GF + +W + G+ +++ + F ++Q+ G+ + V CA L L
Sbjct: 483 GFPRNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFL 542
Query: 167 GKETHGHVIRADL-NKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G HG +I+ L N D + +AL+ Y +C A + FD+ K DD A WN ++
Sbjct: 543 GFTIHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMP-KRDDLA-WNEIVMV 600
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
++G +E AV++F +M+ K ++ V +L C + + QI + G +
Sbjct: 601 NLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYV-LRLGFES 659
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
++ + R+G+L+ +R++ + + +S ++S++ +
Sbjct: 660 NVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSS 701
>gi|218186152|gb|EEC68579.1| hypothetical protein OsI_36919 [Oryza sativa Indica Group]
Length = 586
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/384 (32%), Positives = 209/384 (54%), Gaps = 9/384 (2%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ SV S A L + GRQ+H + D ++ ++LVDMY KCG V
Sbjct: 79 PDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKSSLVDMYCKCGSPDDGRKV 138
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + ++N + W +++G NGRSE+A++LF + W ++ISG G
Sbjct: 139 FDSMS-AKNSVVWTALVSGYASNGRSEEALQLFRSMPGRNL----FAWTALISGLVNTGE 193
Query: 129 RFEAFKLFEKMQSTGM-VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A +LF +M+ G+ + ++ V+ A ADL+A LG++ HG +R + +
Sbjct: 194 SVGAVELFVEMRRDGVRIDDAFVLSIVIGASADLAAFVLGRQLHGSAMRLGFLSNMIVGN 253
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI MY KC AR F+ + D W M+ G ++G E A+ ++D M
Sbjct: 254 ALIDMYSKCSDILSAREVFEGITFR--DVISWTTMVVGEAQHGRAEEALALYDRMVLAGA 311
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +FV ++ AC HAG V K Q+F M +++G+ P+ +H+ C +DLL RSG L EA
Sbjct: 312 KPNEVTFVGLIYACSHAGLVQKGRQLFESMKNEYGITPRLQHYTCYLDLLSRSGHLLEAE 371
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
EL+ +P EP + + +LL AC + ++++ ++ KL E+ P++ + +++LSN+YA G
Sbjct: 372 ELMTTMPYEPDEATWGALLSACTKYKDAEMCIRISDKLLELRPKDSSTYILLSNVYAVNG 431
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W+ V ++R+ + ++ K PG S
Sbjct: 432 KWDSVAKVRKCMIGLEIRKEPGYS 455
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 100 LFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM--------------- 144
L EGLAH P+PA +++S +++ + +A LF++ +
Sbjct: 6 LKEGLAHH--PPNPA---ALVSAYAKSRLLPDALHLFDETPRRDIYIYSSLLTAISHSAS 60
Query: 145 ----VPSLKC-------------VTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+P L+C ++SV S A L + +LG++ H H + + N D+ + +
Sbjct: 61 PELALPILRCMLSADALHPDHFVISSVASVFARLRSRRLGRQLHAHFVASPYNGDDVVKS 120
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L+ MY KCG P R+ FD K + W A++SGY NG E A+++F M
Sbjct: 121 SLVDMYCKCGSPDDGRKVFDSMSAK--NSVVWTALVSGYASNGRSEEALQLFRSMPGR-- 176
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
N ++ A++S + G A+++F M D
Sbjct: 177 --NLFAWTALISGLVNTGESVGAVELFVEMRRD 207
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 205/384 (53%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+S T SV+ A ++ G ++HG + D +G++L+DMY C
Sbjct: 170 KPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCT------- 222
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
R++ ++++F+ L D WNSM++G +Q G
Sbjct: 223 -------------------------RTDYSVKVFDNLPVR----DAILWNSMLAGCAQNG 253
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA LF +M +G+ P +S++ AC +L++L LGK+ H +VIR + + +++
Sbjct: 254 SVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISS 313
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+LI MY KCG S ARR FD+ I+ D W AMI G+ +G A+ +FD M+ +
Sbjct: 314 SLIDMYCKCGNVSIARRIFDR--IQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNL 371
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
KPN +F+AVL+AC HAG VDK + F M D +G+ P EH + D LGR G+L+EA
Sbjct: 372 KPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAY 431
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
I + +PT SV+ +LL AC H N+ L EE+A K+ ++EP + +ILSN Y+ G
Sbjct: 432 NFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSG 491
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW + +R+ + + + K P S
Sbjct: 492 RWNEAAHLRKSMRKKGMQKEPACS 515
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 140/310 (45%), Gaps = 29/310 (9%)
Query: 18 ISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRN 77
+ +CA+L G +H L L+ +D AL+++Y K LP + E+ GS
Sbjct: 65 LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCK---LPAPPSHSPEMDGSAV 121
Query: 78 ILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFE 137
+L E ++F+ + + D +WN+++ G ++ G EA L
Sbjct: 122 VL---------------ESVRKVFDEMPEK----DVVSWNTLVLGCAESGRHGEALGLVR 162
Query: 138 KMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCG 197
+M G P ++SVL A+ + ++ G E HG R + D + ++LI MY C
Sbjct: 163 EMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCT 222
Query: 198 QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAV 257
+ ++ + FD ++ D WN+M++G +NG + A+ +F M +KP +F ++
Sbjct: 223 RTDYSVKVFDNLPVR--DAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSL 280
Query: 258 LSACGHAGH--VDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+ ACG+ + K L + + G ++D+ + G + AR + +
Sbjct: 281 IPACGNLASLLLGKQLHAYVIRG---GFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS 337
Query: 316 PTVSVYHSLL 325
P + + +++
Sbjct: 338 PDIVSWTAMI 347
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 95/234 (40%), Gaps = 25/234 (10%)
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC---VTSV---LSACADLSALKLGK 168
+W I + G A LF +M+++ P+ C +TS+ L +CA L LG
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASD--PAAACSSVLTSLPGALKSCAALGLRALGA 78
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQP--------------SWARRFFDQFEIKPD 214
H +R+ D A AL+++Y K P R+ FD E+
Sbjct: 79 SLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFD--EMPEK 136
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D WN ++ G +G + A+ + M ++ KP+S + +VL V + +++
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELH 196
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGAC 328
+ G ++D+ R D + ++ LP +++S+L C
Sbjct: 197 GFATRN-GFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGC 249
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 236/447 (52%), Gaps = 66/447 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P +TF SVI +CASL L + + LK +D ++ TAL+ KC + A +
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS------ 121
+F ++ +N+++W MI+G + NG +++A+ LF + EG KP+ T++++++
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVF 411
Query: 122 -------------------------GFSQLGMRFEAFKLFEKMQST-------------- 142
+ +LG +A K+FE +++
Sbjct: 412 VSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQ 471
Query: 143 -----------------GMVPSLKCVTSVLSACAD-LSALKLGKETHGHVIRADLNKDES 184
G+ P+ +SV++ACA +A + GK+ H + I+ LN
Sbjct: 472 TGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALC 531
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
+++AL++MY K G A F + K D WN+MISGY ++G+ + A+E+FD MQ+
Sbjct: 532 VSSALVTMYAKRGNIDSAHEVFKR--QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Query: 245 EKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLD 304
+ ++ +F+ V++AC HAG V+K + F M +D + P +H+ CM+DL R+G L+
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649
Query: 305 EARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYA 363
+A +I E+P P +V+ +LLGA H N +LGE A KL ++PE+ +V+LSN+YA
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYA 709
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
G W++ +R++++ R++ K PG S
Sbjct: 710 AAGNWQERTNVRKLMDKRKVKKEPGYS 736
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 38/257 (14%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P+ T V + CA L + GRQVH +K +GT+LVDMY+K +
Sbjct: 88 SLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDG 147
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF E+ G RN+++W S+++G+S
Sbjct: 148 RRVFDEM-GERNVVSWT-----------------------------------SLLAGYSW 171
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ ++LF +MQ G++P+ V++V++A + + +G + H V++ + +
Sbjct: 172 NGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPV 231
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+LIS+Y + G AR FD+ EI+ D WN+MI+GY RNG+ EIF+ MQ
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIR--DWVTWNSMIAGYVRNGQDLEVFEIFNKMQLA 289
Query: 246 KVKPNSASFVAVLSACG 262
VKP +F +V+ +C
Sbjct: 290 GVKPTHMTFASVIKSCA 306
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 11/220 (5%)
Query: 97 AMELFEGLAHEGFKPDPATW---NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTS 153
A LF+ + H P T N ++ +S+ EA LF + + + P ++
Sbjct: 44 AHNLFDKIPHR-----PTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSC 98
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
V + CA KLG++ H ++ L S+ T+L+ MYMK + RR FD E+
Sbjct: 99 VFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFD--EMGE 156
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
+ W ++++GY NG Y E+F MQ E V PN + V++A + G V LQ+
Sbjct: 157 RNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQV 216
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
M+ G + F ++ L R G L +AR++ ++
Sbjct: 217 HAMVVKH-GFEEAIPVFNSLISLYSRLGMLRDARDVFDKM 255
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
S++ IS + C P A FD+ +P N ++ Y R+ + + A+ +F +
Sbjct: 27 SISLKFISNTVLC-VPHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLL 85
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKAL--QIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
++P+ ++ V + C AG +D L Q+ FGL +VD+ ++
Sbjct: 86 HSSLQPDESTLSCVFNIC--AGSLDGKLGRQVHCQC-VKFGLVDHVSVGTSLVDMYMKTE 142
Query: 302 RLDEARELIRELPEPTVSVYHSLL-GACW 329
+++ R + E+ E V + SLL G W
Sbjct: 143 NVNDGRRVFDEMGERNVVSWTSLLAGYSW 171
>gi|356519586|ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Glycine max]
Length = 582
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/385 (37%), Positives = 201/385 (52%), Gaps = 42/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP-CAHN 67
P++ TF SVI ACA L L+ G VH S++ + ALV Y K C P A
Sbjct: 106 PSTYTFTSVIKACADLSLLRLGTIVHSHVFVSGYASNSFVQAALVTFYAK-SCTPRVARK 164
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF E+ R+I+ WN SMISG+ Q G
Sbjct: 165 VFDEMP-QRSIIAWN-----------------------------------SMISGYEQNG 188
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EA ++F KM+ +G P SVLSAC+ L +L LG H ++ + + +AT
Sbjct: 189 LASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLAT 248
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
+L++M+ +CG AR FD + + W AMISGYG +G A+E+F M+ V
Sbjct: 249 SLVNMFSRCGDVGRARAVFDS--MNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGV 306
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN ++VAVLSAC HAG +++ +F M ++G+ P EH CMVD+ GR G L+EA
Sbjct: 307 VPNRVTYVAVLSACAHAGLINEGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAY 366
Query: 308 ELIRELP--EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ +R L E +V+ ++LGAC H N DLG E+A L EPENP +V+LSN+YA
Sbjct: 367 QFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALA 426
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
GR + V +R ++ R L K G S
Sbjct: 427 GRMDRVESVRNVMIQRGLKKQVGYS 451
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 127/258 (49%), Gaps = 6/258 (2%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
PD +NS+I S G +A + +M + +VPS TSV+ ACADLS L+LG
Sbjct: 71 PDSFLFNSLIKASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADLSLLRLGTIV 130
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H HV + + + AL++ Y K P AR+ FD E+ WN+MISGY +NG
Sbjct: 131 HSHVFVSGYASNSFVQAALVTFYAKSCTPRVARKVFD--EMPQRSIIAWNSMISGYEQNG 188
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
AVE+F+ M++ +P+SA+FV+VLSAC G +D + + G++
Sbjct: 189 LASEAVEVFNKMRESGGEPDSATFVSVLSACSQLGSLDLGCWLHECIVGT-GIRMNVVLA 247
Query: 291 GCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AMKLQEME 348
+V++ R G + AR + + E V + +++ H E+ MK +
Sbjct: 248 TSLVNMFSRCGDVGRARAVFDSMNEGNVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVV 307
Query: 349 PENPTPFVILSNI-YAGL 365
P T +LS +AGL
Sbjct: 308 PNRVTYVAVLSACAHAGL 325
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 41/281 (14%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+S TF+SV+SAC+ L L G +H + + + ++ T+LV+M+ +CG + A
Sbjct: 206 EPDSATFVSVLSACSQLGSLDLGCWLHECIVGTGIRMNVVLATSLVNMFSRCGDVGRARA 265
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + N+++W MI+G ++G +AME+F + G P+ T+ +++S + G
Sbjct: 266 VFDSMNEG-NVVSWTAMISGYGMHGYGVEAMEVFHRMKACGVVPNRVTYVAVLSACAHAG 324
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
+ E +F M Q G+VP G E H
Sbjct: 325 LINEGRLVFASMKQEYGVVP--------------------GVEHH--------------- 349
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF-DLMQQE 245
++ M+ + G + A +F + PA W AM+ + ++ VE+ +L+ E
Sbjct: 350 VCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLGACKMHKNFDLGVEVAENLISAE 409
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPK 286
P ++ + A AG +D+ + +M GLK +
Sbjct: 410 PENPGHYVLLSNMYAL--AGRMDRVESVRNVMIQR-GLKKQ 447
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 89/201 (44%), Gaps = 11/201 (5%)
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L+ ++ H H++ ++ ++ T L+++ G ++ RR F + D +N++I
Sbjct: 23 LRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRS--VSDPDSFLFNSLI 80
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF-- 281
G AV + M ++ P++ +F +V+ AC L++ T++
Sbjct: 81 KASSNFGFSLDAVFFYRRMLHSRIVPSTYTFTSVIKACADL----SLLRLGTIVHSHVFV 136
Query: 282 -GLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM 340
G +V +S AR++ E+P+ ++ ++S++ + + E+
Sbjct: 137 SGYASNSFVQAALVTFYAKSCTPRVARKVFDEMPQRSIIAWNSMISGYEQNGLASEAVEV 196
Query: 341 AMKLQEM--EPENPTPFVILS 359
K++E EP++ T +LS
Sbjct: 197 FNKMRESGGEPDSATFVSVLS 217
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/384 (35%), Positives = 205/384 (53%), Gaps = 40/384 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PNS T +++I + + + +HG LK +++ + TA+ ++ + + A
Sbjct: 311 PNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKA 370
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + EK ME +WN+MISG++Q G+
Sbjct: 371 FDTMP---------------------EKTME---------------SWNAMISGYAQNGL 394
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A LFE+M + P+ ++S LSACA L AL LGK H + DL + + TA
Sbjct: 395 TEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTA 454
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KCG S ARR F+ + K + WNAMI+GYG +G+ A++++ M +
Sbjct: 455 LIDMYAKCGSISEARRIFNTMDNK--NVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P SA+F++VL AC H G V++ ++F M DD+ + P EH CMVDLLGR+G+L EA E
Sbjct: 513 PTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKEAFE 572
Query: 309 LIRELPEPTV--SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
LI E P+ V V+ +LLGAC H +SDL + + KL E++PEN +V+LSN++
Sbjct: 573 LISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSNLHTSKK 632
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
++ + +RQ R+L K PG +
Sbjct: 633 QYSEAAVVRQEAKSRKLVKTPGYT 656
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 170/389 (43%), Gaps = 49/389 (12%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S P++ T SV+ A A + + GR VH K + T L+ +Y KCG + A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F ++ KPD +N++ISG+S
Sbjct: 267 RCLFDMME------------------------------------KPDLVAYNALISGYSV 290
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
GM + LF ++ + G+ P+ + +++ + L + HG V+++ + +
Sbjct: 291 NGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPV 350
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TA+ +++ + AR+ FD K + WNAMISGY +NG E AV +F+ M +
Sbjct: 351 STAITTLHCRLNDMESARKAFDTMPEKTMES--WNAMISGYAQNGLTEMAVALFEQMVKL 408
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+PN + + LSAC G + + ++ ++ L+P ++D+ + G + E
Sbjct: 409 NVRPNPITISSTLSACAQLGALSLGKWLHRIITEE-DLEPNVYVMTALIDMYAKCGSISE 467
Query: 306 ARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA 363
AR + + V +++++ H G E ++M + PT LS +YA
Sbjct: 468 ARRIFNTMDNKNVVSWNAMIAGYGLH---GQGAEALKLYKDMLDAHLLPTSATFLSVLYA 524
Query: 364 GL--GRWEDVGRI-RQMINDRQLTKLPGI 389
G E+ ++ R M +D + PGI
Sbjct: 525 CSHGGLVEEGWKVFRSMTDDYAIN--PGI 551
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 28/288 (9%)
Query: 93 RSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PSLKCV 151
R + A ++F+ + PD WN++++G S EA + F +M G V P +
Sbjct: 164 RVDHARKVFDTVP----SPDTVLWNTLLAGLSG----SEAVESFARMVCDGSVRPDATTL 215
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
SVL A A+++ + +G+ H + L + E + T LIS+Y KCG AR FD E
Sbjct: 216 ASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMME- 274
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGH--VDK 269
KPD A+ NA+ISGY NG S+V +F + + PNS++ VA++ GH + +
Sbjct: 275 KPDLVAY-NALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQ 333
Query: 270 ALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACW 329
L F + G + L R ++ AR+ +PE T+ +++++
Sbjct: 334 CLHGFVLKS---GFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISG-- 388
Query: 330 CHLNSDLGEEMAMKLQEMEPEN--PTPFVILSNIYA-------GLGRW 368
+ + L E ++M N P P I S + A LG+W
Sbjct: 389 -YAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKW 435
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L+ PN +T S +SACA L L G+ +H + + + + + + TAL+DMY KCG +
Sbjct: 408 LNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISE 467
Query: 65 AHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
A +F + ++N+++WN MIAG L+G+ +A++L++ + P AT+ S++ S
Sbjct: 468 ARRIFNTMD-NKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACS 526
Query: 125 QLGMRFEAFKLFEKM 139
G+ E +K+F M
Sbjct: 527 HGGLVEEGWKVFRSM 541
>gi|125558027|gb|EAZ03563.1| hypothetical protein OsI_25699 [Oryza sativa Indica Group]
Length = 528
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 199/339 (58%), Gaps = 16/339 (4%)
Query: 60 GCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRS--EKAMELFEGLAHEGFKPDPATWN 117
G H + ++ RN NTM+ G E A ++F+ + + D +WN
Sbjct: 69 GVTASLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTM-----ERDVVSWN 123
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKC----VTSVLSACADLSALKLGKETHGH 173
SMI+ ++Q GM EA L+ KM + G +KC +++VL ACA A++ GK H
Sbjct: 124 SMIALYAQNGMSAEAIGLYSKMLNVG--GGIKCNAVALSAVLLACAHAGAIQTGKHIHNQ 181
Query: 174 VIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYE 233
V+R L ++ + T+++ MY KCG+ A R F + IK + W+AMI+GYG +G +
Sbjct: 182 VVRMGLEENVYVGTSIVDMYSKCGRVEMASRAFRK--IKEKNILSWSAMITGYGMHGRGQ 239
Query: 234 SAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCM 293
A+EIF M++ ++PN +F++VL+AC HAG +D+ + M +FG++ EH+GCM
Sbjct: 240 EALEIFTEMKRSGLRPNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYGCM 299
Query: 294 VDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENP 352
VDLLGR+G LDEA LI+E+ +P +++ +LL AC H N +L E +L E++ N
Sbjct: 300 VDLLGRAGCLDEAYSLIKEMKVKPDAAIWGALLSACRIHKNVELAEMSVKRLFELDASNS 359
Query: 353 TPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
+V+LSNIYA G W+DV RIR ++ R++ K PG S+
Sbjct: 360 GYYVLLSNIYAEAGMWKDVERIRLLVKTRRIEKPPGYSS 398
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 124/254 (48%), Gaps = 18/254 (7%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
N+V +V+ ACA +Q G+ +H +++ + + +GT++VDMY KCG + A F
Sbjct: 155 NAVALSAVLLACAHAGAIQTGKHIHNQVVRMGLEENVYVGTSIVDMYSKCGRVEMASRAF 214
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+++K +NIL+W+ MI G ++GR ++A+E+F + G +P+ T+ S+++ S G+
Sbjct: 215 RKIK-EKNILSWSAMITGYGMHGRGQEALEIFTEMKRSGLRPNYITFISVLAACSHAGLL 273
Query: 130 FEAFKLFEKM-QSTGM---VPSLKCVTSVL--SACADLSALKLGKETHGHVIRADLNKDE 183
E + M Q G+ V C+ +L + C D E + + + D
Sbjct: 274 DEGRYWYNAMKQEFGIEAGVEHYGCMVDLLGRAGCLD--------EAYSLIKEMKVKPDA 325
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ AL+S A + FE+ + ++ + + Y G ++ I L+
Sbjct: 326 AIWGALLSACRIHKNVELAEMSVKRLFELDASNSGYYVLLSNIYAEAGMWKDVERIRLLV 385
Query: 243 QQEKVK--PNSASF 254
+ +++ P +SF
Sbjct: 386 KTRRIEKPPGYSSF 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 16/270 (5%)
Query: 111 PDPATWNSMISGFSQLGMRFEAFKLFEKM--QSTGMVPSLKCVTSVLSACADLSALKLGK 168
P+P +M SG+ + + + + +LF M + V SA A + +
Sbjct: 13 PNPVIVTAMASGYVRNNLVYHSLELFRAMIASDSASVVDEAAALVAFSASARVPDRGVTA 72
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSW--ARRFFDQFEIKPDDPAFWNAMISGY 226
H + + ++ + ++ Y K G AR+ FD E D WN+MI+ Y
Sbjct: 73 SLHALIAKIGFERNAGVVNTMLDSYAKGGSRDLEVARKVFDTME---RDVVSWNSMIALY 129
Query: 227 GRNGEYESAVEIFDLMQQE--KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLK 284
+NG A+ ++ M +K N+ + AVL AC HAG + I + GL+
Sbjct: 130 AQNGMSAEAIGLYSKMLNVGGGIKCNAVALSAVLLACAHAGAIQTGKHIHNQV-VRMGLE 188
Query: 285 PKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEM--AM 342
+VD+ + GR++ A R++ E + + +++ H E+ M
Sbjct: 189 ENVYVGTSIVDMYSKCGRVEMASRAFRKIKEKNILSWSAMITGYGMHGRGQEALEIFTEM 248
Query: 343 KLQEMEPENPTPFVILSNI-YAGL---GRW 368
K + P T +L+ +AGL GR+
Sbjct: 249 KRSGLRPNYITFISVLAACSHAGLLDEGRY 278
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 17/114 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALVDMYLKCGC 61
PN +TFISV++AC+ L GR Q G+ +E +VD+ + GC
Sbjct: 255 PNYITFISVLAACSHAGLLDEGRYWYNAMKQEFGIEAGVEHYG------CMVDLLGRAGC 308
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
L A+++ +E+K + W +++ R K +EL E F+ D +
Sbjct: 309 LDEAYSLIKEMKVKPDAAIWGALLSAC----RIHKNVELAEMSVKRLFELDASN 358
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 210/381 (55%), Gaps = 40/381 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV++A + L G Q HG+ +K ++ +G+ L+D+Y KC
Sbjct: 245 TMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKC------------- 291
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GMRFE 131
AG M+ R ++FE +A PD WN+MISGFSQ + +
Sbjct: 292 -------------AGGMVECR-----KVFEEIA----APDLVLWNTMISGFSQYEDLSED 329
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE-SMATALI 190
F +MQ G P V SAC++LS+ +GK+ H I++D+ + S+ AL+
Sbjct: 330 GIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALV 389
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG ARR FD + + N+MI+GY ++G ++ +F+LM Q+ + PN
Sbjct: 390 AMYSKCGNVHDARRVFDT--MPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPN 447
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
+ +F+AVLSAC H G V++ + F MM + F ++P+ EH+ CM+DLLGR+G+L EA +I
Sbjct: 448 TITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
+P P + +LLGAC H N +L + A + ++EP N P+V+LSN+YA RWE
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWE 567
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+ +++++ +R + K PG S
Sbjct: 568 EAATVKRLMRERGVKKKPGCS 588
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 157/344 (45%), Gaps = 12/344 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF +++ AC + L G+ +H L K T + +Y KCG L A F +L
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF-DL 69
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
N+ ++NT+I + A ++F+ + +PD ++N++I+ ++ G A
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHLARQVFDEIP----QPDIVSYNTLIAAYADRGECRPA 125
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LF +++ ++ V+ AC D + L ++ H V+ + S+ A+++
Sbjct: 126 LRLFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLAC 183
Query: 193 YMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y + G + ARR F + E D WNAMI G++ E AVE+F M + +K +
Sbjct: 184 YSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDM 243
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR-SGRLDEARELI 310
+ +VL+A + +Q MM G ++DL + +G + E R++
Sbjct: 244 FTMASVLTAFTCVKDLVGGMQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGGMVECRKVF 302
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
E+ P + ++++++ + DL E+ +EM+ P
Sbjct: 303 EEIAAPDLVLWNTMISGFSQY--EDLSEDGIWCFREMQHNGFHP 344
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 139/328 (42%), Gaps = 14/328 (4%)
Query: 57 LKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATW 116
L C + C ++ + + N ++A G +A +F + EG D +W
Sbjct: 161 LHCFVVVCGYDCYASVN--------NAVLACYSRKGFLNEARRVFREMG-EGGGRDEVSW 211
Query: 117 NSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR 176
N+MI Q EA +LF +M G+ + + SVL+A + L G + HG +I+
Sbjct: 212 NAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIK 271
Query: 177 ADLNKDESMATALISMYMKC-GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ES 234
+ + + + + LI +Y KC G R+ F+ EI D WN MISG+ + + E
Sbjct: 272 SGFHGNSHVGSGLIDLYSKCAGGMVECRKVFE--EIAAPDLVLWNTMISGFSQYEDLSED 329
Query: 235 AVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
+ F MQ P+ SFV V SAC + Q+ + + +V
Sbjct: 330 GIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALV 389
Query: 295 DLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH-LNSDLGEEMAMKLQEMEPENPT 353
+ + G + +AR + +PE + +S++ H + + + LQ+ N
Sbjct: 390 AMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTI 449
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDR 381
F+ + + G+ E+ + M+ +R
Sbjct: 450 TFIAVLSACVHTGKVEEGQKYFNMMKER 477
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 165/391 (42%), Gaps = 46/391 (11%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAH 66
P+ +F+ V SAC++L G+QVH L +K + + + + ALV MY KCG + A
Sbjct: 343 HPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDAR 402
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF + N+++ N+MIAG +G +++ LFE + + P+ T+ +++S
Sbjct: 403 RVFDTMP-EHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHT 461
Query: 127 GMRFEAFKLFEKMQSTGMV----PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
G E K F M+ + C+ +L L KE + N
Sbjct: 462 GKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAGKL------KEAERIIETMPFNPG 515
Query: 183 ESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
L+ K G A + ++F +++P + A + + + Y +E A + L
Sbjct: 516 SIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRL 575
Query: 242 MQQEKVKPN-SASFVAVLSACGHAGHVDKALQIFTMMDDDFG-LKPKQEHFGCMVDLLGR 299
M++ VK S++ +DK + +F D +K + G ++ + +
Sbjct: 576 MRERGVKKKPGCSWI----------EIDKKVHVFVAEDTSHPMIKEIHVYMGEILRKMKQ 625
Query: 300 SGRLDEAR-ELIR-ELPEPTVS----VYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPT 353
+G + + R L++ E EP +YHS E++A+ + E
Sbjct: 626 AGYVPDIRWALVKDEEVEPDEKERRLLYHS--------------EKLAVAFGLISTEEWV 671
Query: 354 PFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
P +++ N+ G + ++ I R++T
Sbjct: 672 PILVVKNLRI-CGDCHNAIKLISAITGREIT 701
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 82/203 (40%), Gaps = 44/203 (21%)
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
L+ ++L AC L GK H ++ + ++ +Y KCG A+ FD
Sbjct: 9 LQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFD 68
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
+ P+ ++ N +I+ Y ++ A ++FD + Q P+ S+ +++A G
Sbjct: 69 LTQY-PNVFSY-NTLINAYAKHSLIHLARQVFDEIPQ----PDIVSYNTLIAAYADRGEC 122
Query: 268 DKALQIFTMMD-------------------DDFGLKPKQEHFGCMVDLLG---------- 298
AL++F + DD GL +Q H C V + G
Sbjct: 123 RPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGL-VRQLH--CFVVVCGYDCYASVNNA 179
Query: 299 ------RSGRLDEARELIRELPE 315
R G L+EAR + RE+ E
Sbjct: 180 VLACYSRKGFLNEARRVFREMGE 202
>gi|297849216|ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1014
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 210/385 (54%), Gaps = 10/385 (2%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ T+ ++ +C+SL L+FG+ VHG ++ + +V++Y G + A VF
Sbjct: 623 DEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVVELYTSGGRMGDAQKVF 682
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
E+ RN++ WN M+ G +G ++ + F+ ++ +WNSMIS S+ G
Sbjct: 683 DEMP-ERNVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSI----VSWNSMISSLSKCGRD 737
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD-ESMATA 188
EA +LF +M G P V ++L A L L GK H L KD ++ A
Sbjct: 738 REALELFCEMIDQGFDPDEATVVTMLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNA 797
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE-KV 247
L+ Y K G A F + + + + WN MISG NG+ ES +++FD M +E KV
Sbjct: 798 LVDFYCKSGDLEAATAIFRKMQRR--NVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKV 855
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+F+ VL+ C + G V++ ++F +M + F L+P+ EH+G MVDL+ RSGR+ EA
Sbjct: 856 APNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEPRTEHYGAMVDLMSRSGRIREAF 915
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
E +R +P +++ SLL AC H + L E AM+L ++EP N +V+LSN+YA G
Sbjct: 916 EFLRNMPVNANAAMWGSLLSACRSHGDVKLAELAAMELVKIEPGNSGNYVLLSNLYAEEG 975
Query: 367 RWEDVGRIRQMINDRQLTKLPGISA 391
RW+DV ++R ++ L K G S
Sbjct: 976 RWQDVEKVRTLMKKNCLRKTTGQST 1000
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 43/277 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTM-IGTALVDMYLKCGCLPCAH 66
+P+ T ++++ ASL L G+ +H D + +G ALVD Y K G L A
Sbjct: 753 DPDEATVVTMLPISASLGVLDTGKWIHSTAESNGLIKDFITVGNALVDFYCKSGDLEAAT 812
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEG-FKPDPATWNSMISGFSQ 125
+F++++ RN+++WNTMI+G +NG+ E ++LF+ + EG P+ AT+
Sbjct: 813 AIFRKMQ-RRNVVSWNTMISGSAVNGKGESGIDLFDAMIEEGKVAPNEATF--------- 862
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVI-RADLNKDES 184
LG VL+ C+ ++ G+E G ++ R L
Sbjct: 863 LG--------------------------VLACCSYTGQVERGEELFGLMMERFKLEPRTE 896
Query: 185 MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ 244
A++ + + G+ A F + + A W +++S +G+ + A M+
Sbjct: 897 HYGAMVDLMSRSGRIREAFEFLRNMPVNA-NAAMWGSLLSACRSHGDVKLAE--LAAMEL 953
Query: 245 EKVKP-NSASFVAVLSACGHAGHVDKALQIFTMMDDD 280
K++P NS ++V + + G ++ T+M +
Sbjct: 954 VKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 990
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 7/177 (3%)
Query: 131 EAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALI 190
++ F M+S G+ +L +C+ LS L+ GK HG VIR ++ + ++
Sbjct: 607 KSLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGEVIRTGFHRLGKVRIGVV 666
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+Y G+ A++ FD E+ + WN M+ G+ +G+ + + F M + +
Sbjct: 667 ELYTSGGRMGDAQKVFD--EMPERNVVVWNLMVRGFCDSGDVQRGLSFFKQMSERSI--- 721
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
S+ +++S+ G +AL++F M D G P + M+ + G LD +
Sbjct: 722 -VSWNSMISSLSKCGRDREALELFCEMIDQ-GFDPDEATVVTMLPISASLGVLDTGK 776
>gi|357142899|ref|XP_003572730.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 497
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 205/348 (58%), Gaps = 11/348 (3%)
Query: 44 SDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEG 103
+D + T +V + + G + A F + RN+++WN M+ G +A +LF+G
Sbjct: 142 ADVVTWTTMVAGHARAGDVERARWFFDAMP-ERNVVSWNAMLGAYASAGMLSEARKLFDG 200
Query: 104 LAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSA 163
+ + ATW+SM++G Q EA ++F M + G+VP+ + SV+SACA L +
Sbjct: 201 M----HSRNAATWSSMVTGLVQSDHCEEALRVFSDMVARGVVPNESILVSVISACAQLRS 256
Query: 164 LKLGKETHGHVIRADLNKDES--MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNA 221
L+ G H +V R +L+ S +ATA++ MY KCG A R F ++ + WN+
Sbjct: 257 LEHGVWVHAYVKR-ELHGSMSVILATAIVDMYGKCGCIHNAIRVFAAMPVR--NIYSWNS 313
Query: 222 MISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDF 281
MI+G NG A+ +F MQ V+PN +F+ +L AC H+G VD+ +F M +DF
Sbjct: 314 MITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSGLVDEGRWLFNRMVNDF 373
Query: 282 GLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEM 340
G++P EH+G MVDLLGR+G + EA + ++ +P EP ++ +L GAC H +LGEE+
Sbjct: 374 GIQPVPEHYGLMVDLLGRAGLVKEAVDFVKNMPVEPHPGLWGALAGACNIHGEVELGEEI 433
Query: 341 AMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPG 388
A KL E+EP + + +++LSNIY RWED+ +R++I +R+++K G
Sbjct: 434 AKKLIELEPRHGSRYILLSNIYGTSSRWEDMATVRRLIKERKVSKGTG 481
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLK-IEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PN +SVISACA L L+ G VH + + ++ TA+VDMY KCGC+ A
Sbjct: 239 PNESILVSVISACAQLRSLEHGVWVHAYVKRELHGSMSVILATAIVDMYGKCGCIHNAIR 298
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + RNI +WN+MI G+ +NGR +A+ LF + G +P+ T+ ++ S G
Sbjct: 299 VFAAMP-VRNIYSWNSMITGLAMNGREMQALSLFWKMQMAGVQPNDITFIGLLGACSHSG 357
Query: 128 MRFEAFKLFEKM 139
+ E LF +M
Sbjct: 358 LVDEGRWLFNRM 369
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 73/187 (39%), Gaps = 13/187 (6%)
Query: 146 PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRF 205
P ++ L +C L + H +R D + A +S Y + A R
Sbjct: 74 PDHLSISFSLHSCTRLPCHPIASLLHSFAVRLGHAGDVYIVNAAVSAYFTAADVASAERL 133
Query: 206 FDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAG 265
F D W M++G+ R G+ E A FD M + N S+ A+L A AG
Sbjct: 134 FSDTSKDVADVVTWTTMVAGHARAGDVERARWFFDAMPER----NVVSWNAMLGAYASAG 189
Query: 266 HVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE----PTVSVY 321
+ +A ++F M + MV L +S +EA + ++ P S+
Sbjct: 190 MLSEARKLFDGMHSR-----NAATWSSMVTGLVQSDHCEEALRVFSDMVARGVVPNESIL 244
Query: 322 HSLLGAC 328
S++ AC
Sbjct: 245 VSVISAC 251
>gi|449451309|ref|XP_004143404.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
gi|449526377|ref|XP_004170190.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 577
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 207/381 (54%), Gaps = 12/381 (3%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ +T +S+ CA L L+F RQVHG + I + + ++ A+VD Y KCG ++++F
Sbjct: 144 DEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYGKCGDPDASYSIF 203
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
+K R+++TW +M+ R + A +F + + TW ++I+ +
Sbjct: 204 SRMK-ERDVVTWTSMVVAYNQTSRLDDAFRVFSCMP----VKNVHTWTALINALVKNKYS 258
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIR--ADLN-KDESMA 186
EA LF++M P+ VLSACADL+ + GKE HG +IR ++LN + +
Sbjct: 259 NEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVC 318
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI +Y K G AR F+ I D WN++I+G+ +NG A+ F M +
Sbjct: 319 NALIDLYSKSGDVKSARMLFNL--ILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVG 376
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
++PN +F+AVLSAC H G + L I +M+ + ++P EH+ M+D+ GR RL EA
Sbjct: 377 IRPNKVTFLAVLSACSHTGLSSEGLCILELMEKFYDIEPSLEHYAVMIDMFGRENRLAEA 436
Query: 307 RELIRELPEPT--VSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+LI P + V ++ ++LGAC H N DL A L EMEP+N +V+LSN++A
Sbjct: 437 LDLISRAPNGSKHVGIWGAVLGACRIHENLDLAIRAAETLFEMEPDNAGRYVMLSNVFAA 496
Query: 365 LGRWEDVGRIRQMINDRQLTK 385
RW D +R+++ +R K
Sbjct: 497 ASRWMDAHNVRKLMEERGFKK 517
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 56/386 (14%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
+ S C +L+ G +H +K D + L+DMY KC + A F +L R
Sbjct: 17 LFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMENAQKAFDDLP-IR 75
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
NI +WNT++A G +A ++F+ + H P+ ++N++IS F+ G+ E+ +F
Sbjct: 76 NIHSWNTILASYSRAGFFSQARKVFDEMPH----PNIVSYNTLISSFTHHGLYVESMNIF 131
Query: 137 EKMQSTGMVPSLKCVT--SVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYM 194
+MQ + +L +T S+ CA L AL+ ++ HG I L + + A++ Y
Sbjct: 132 RQMQQDFDLLALDEITLVSIAGTCACLGALEFLRQVHGAAIVIGLEFNMIVCNAIVDAYG 191
Query: 195 KCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIF--------------- 239
KCG P + F + +K D W +M+ Y + + A +F
Sbjct: 192 KCGDPDASYSIFSR--MKERDVVTWTSMVVAYNQTSRLDDAFRVFSCMPVKNVHTWTALI 249
Query: 240 -------------DLMQQ---EKVKPNSASFVAVLSACGHAGHVDKALQIFTMM-----D 278
DL QQ EK PN+ +FV VLSAC + K +I ++ +
Sbjct: 250 NALVKNKYSNEALDLFQQMLEEKTSPNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSE 309
Query: 279 DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGE 338
+F P ++DL +SG + AR L + E V ++SL+ + LG
Sbjct: 310 LNF---PNVYVCNALIDLYSKSGDVKSARMLFNLILEKDVVSWNSLITG---FAQNGLGR 363
Query: 339 EMAMKLQEM-----EPENPTPFVILS 359
E + ++M P T +LS
Sbjct: 364 EALLAFRKMTEVGIRPNKVTFLAVLS 389
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ---SDTMIGTALVDMYLKCGCLPCA 65
PN+ TF+ V+SACA L + G+++HGL ++ + + + AL+D+Y K G + A
Sbjct: 275 PNAFTFVGVLSACADLALIAKGKEIHGLIIRRSSELNFPNVYVCNALIDLYSKSGDVKSA 334
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F L +++++WN++I G NG +A+ F + G +P+ T+ +++S S
Sbjct: 335 RMLFN-LILEKDVVSWNSLITGFAQNGLGREALLAFRKMTEVGIRPNKVTFLAVLSACSH 393
Query: 126 LGMRFEAFKLFEKMQS-TGMVPSLK 149
G+ E + E M+ + PSL+
Sbjct: 394 TGLSSEGLCILELMEKFYDIEPSLE 418
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 142 TGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSW 201
+ + PS + S C L++G H H+I+ L+ D +A LI MY KC
Sbjct: 5 SDLFPSFDHCARLFSKCIQHKHLRVGMSLHSHLIKTALSFDLFLANRLIDMYSKCNSMEN 64
Query: 202 ARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSAC 261
A++ FD I+ + WN +++ Y R G + A ++FD M PN S+ ++S+
Sbjct: 65 AQKAFDDLPIR--NIHSWNTILASYSRAGFFSQARKVFDEMPH----PNIVSYNTLISSF 118
Query: 262 GHAGHVDKALQIFTMMDDDFGLKPKQE 288
H G +++ IF M DF L E
Sbjct: 119 THHGLYVESMNIFRQMQQDFDLLALDE 145
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/449 (30%), Positives = 225/449 (50%), Gaps = 68/449 (15%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKC-------- 59
P+ +T+++V+SAC SL L+ G+Q+H ++ E SD + TAL MY+KC
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286
Query: 60 -----------------------GCLPCAHNVFQEL--KG-SRNILTWNTMIAGMMLNGR 93
G L AH F + +G + + T+ T+++ G
Sbjct: 287 VFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGG 346
Query: 94 SEKAMELFEGLAHEGF-------------------------------KPDPATWNSMISG 122
+ E+ A +G K D +W +++
Sbjct: 347 LARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGR 406
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
++ E+F F++M G+ + VL AC++ ALK GKE H V++A L D
Sbjct: 407 YADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
++ AL+SMY KCG A R F+ ++ D WN +I G G+NG A++ +++M
Sbjct: 467 LAVTNALMSMYFKCGSVEDAIRVFEGMSMR--DVVTWNTLIGGLGQNGRGLEALQRYEVM 524
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ E ++PN+A+FV VLSAC V++ + F M D+G+ P ++H+ CMVD+L R+G
Sbjct: 525 KSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGH 584
Query: 303 LDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
L EA ++I +P +P+ +++ +LL AC H N ++GE A ++EP+N +V LS I
Sbjct: 585 LREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAI 644
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
YA G W DV ++R+ + +R + K PG S
Sbjct: 645 YAAAGMWRDVAKLRKFMKERGVKKEPGRS 673
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 39/319 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EP+ TF+S++SAC+S L +GR++H ++ +DT +G AL+ MY KCG + A
Sbjct: 126 EPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARR 185
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF + SR+ ++W T+ +G E++++ + + E +P T+
Sbjct: 186 VFDAM-ASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITY----------- 233
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+VLSAC L+AL+ GK+ H H++ ++ + D ++T
Sbjct: 234 ------------------------MNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVST 269
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
AL MYMKCG AR F+ + D WN MI G+ +G+ E A F M +E V
Sbjct: 270 ALTKMYMKCGAFKDAREVFECLSYR--DVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGV 327
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P+ A++ VLSAC G + + +I D GL ++++ ++G + +AR
Sbjct: 328 APDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALINMYSKAGSMKDAR 386
Query: 308 ELIRELPEPTVSVYHSLLG 326
++ +P+ V + +LLG
Sbjct: 387 QVFDRMPKRDVVSWTTLLG 405
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 155/355 (43%), Gaps = 72/355 (20%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+ +S ++ ++ +C L G+QVH + L+CG P
Sbjct: 25 QVDSYDYVKLLQSCVKAKDLAVGKQVH-------------------EHILRCGVKP---- 61
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
N+ NT++ G +A +LF+ +++ +WN MISG++ G
Sbjct: 62 ---------NVYITNTLLKLYAHCGSVNEARQLFDKFSNKSV----VSWNVMISGYAHRG 108
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+ EAF LF MQ + P S+LSAC+ + L G+E H V+ A L D ++
Sbjct: 109 LAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGN 168
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALISMY KCG ARR FD + D W + Y +G E +++ + M QE+V
Sbjct: 169 ALISMYAKCGSVRDARRVFDAMASR--DEVSWTTLTGAYAESGYGEESLKTYHAMLQERV 226
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFT-MMDDDF------------------GLKPKQE 288
+P+ +++ VLSACG ++K QI +++ ++ K +E
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDARE 286
Query: 289 HFGC-----------MVDLLGRSGRLDEA----RELIRELPEPTVSVYHSLLGAC 328
F C M+ SG+L+EA ++ E P + Y ++L AC
Sbjct: 287 VFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSAC 341
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 154 VLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKP 213
+L +C L +GK+ H H++R + + + L+ +Y CG + AR+ FD+F K
Sbjct: 34 LLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNK- 92
Query: 214 DDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQI 273
WN MISGY G + A +F LMQQE+++P+ +FV++LSAC ++ +I
Sbjct: 93 -SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREI 151
Query: 274 FTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLN 333
+ + GL ++ + + G + +AR + + + +L GA +
Sbjct: 152 HVRVMEA-GLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGA---YAE 207
Query: 334 SDLGEE-----MAMKLQEMEPENPTPFVILS 359
S GEE AM + + P T +LS
Sbjct: 208 SGYGEESLKTYHAMLQERVRPSRITYMNVLS 238
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 201/382 (52%), Gaps = 39/382 (10%)
Query: 10 NSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVF 69
+ VT +SV++AC + + G+ V G + + + TAL+DMY KCG +
Sbjct: 220 DEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEI------- 272
Query: 70 QELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMR 129
KA LF+G+ D W++MISG++Q
Sbjct: 273 -------------------------GKARRLFDGMQSR----DVVAWSAMISGYTQADQC 303
Query: 130 FEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATAL 189
EA LF +MQ + P+ + SVLSACA L AL+ GK H +V R L+ + TAL
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 190 ISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKP 249
+ Y KCG A F+ +K + W A+I G NG A+E+F M++ ++P
Sbjct: 364 VDFYAKCGCIDDAVEAFESMPVK--NSWTWTALIKGMATNGRGREALELFSSMREAGIEP 421
Query: 250 NSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAREL 309
+F+ VL AC H+ V++ + F M D+G+KP+ EH+GCMVDLLGR+G +DEA +
Sbjct: 422 TDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQF 481
Query: 310 IRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRW 368
IR +P EP ++ +LL +C H N +GEE ++ + P + +V+LSNIYA G+W
Sbjct: 482 IRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQW 541
Query: 369 EDVGRIRQMINDRQLTKLPGIS 390
+D +R+ + DR + K PG S
Sbjct: 542 KDAAMVRKEMKDRGIEKTPGCS 563
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 39/302 (12%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T + +C+ + L GR V +K +D + ++L+ MY CG + A VF
Sbjct: 122 TAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAA 181
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
+ S ++ WN ++A + ++ ME+ E M G ++G+ F+
Sbjct: 182 EES-GVVMWNAIVAAYL---KNGDWMEVVE----------------MFKGMLEVGVAFDE 221
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
L SV++AC + KLGK GHV L ++ + TAL+ M
Sbjct: 222 VTL----------------VSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDM 265
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KCG+ ARR FD + + D W+AMISGY + + A+ +F MQ +V+PN
Sbjct: 266 YAKCGEIGKARRLFDGMQSR--DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDV 323
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
+ V+VLSAC G ++ + + + L +VD + G +D+A E
Sbjct: 324 TMVSVLSACAVLGALETGKWVHSYVRRK-RLSLTTILGTALVDFYAKCGCIDDAVEAFES 382
Query: 313 LP 314
+P
Sbjct: 383 MP 384
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
EPN VT +SV+SACA L L+ G+ VH + T++GTALVD Y KCGC+ A
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVE 378
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F+ + +N TW +I GM NGR +A+ELF + G +P T+ ++ S
Sbjct: 379 AFESMP-VKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC 437
Query: 128 MRFEAFKLFEKM-QSTGMVPSLK 149
+ E + F+ M + G+ P ++
Sbjct: 438 LVEEGRRHFDSMARDYGIKPRVE 460
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 133/286 (46%), Gaps = 16/286 (5%)
Query: 108 GFKPDPAT--WNSMISGFSQLGMRFEAFKLF-EKMQSTGMVPSLKCVTS-VLSACADLSA 163
G +P +T +N ++ F G +A LF E + + P+ + + L +C+ + A
Sbjct: 76 GPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCA 135
Query: 164 LKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMI 223
L +G+ + ++ L D + ++LI MY CG + AR FD E WNA++
Sbjct: 136 LDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAE--ESGVVMWNAIV 193
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+ Y +NG++ VE+F M + V + + V+V++ACG G + +D++ GL
Sbjct: 194 AAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEE-GL 252
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSD-----LGE 338
+ ++D+ + G + +AR L + V + +++ + +D LG
Sbjct: 253 ARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISG---YTQADQCREALGL 309
Query: 339 EMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLT 384
M+L +EP + T +LS A LG E + + ++L+
Sbjct: 310 FSEMQLARVEPNDVTMVSVLSAC-AVLGALETGKWVHSYVRRKRLS 354
>gi|356502600|ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 518
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 213/390 (54%), Gaps = 16/390 (4%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T V+ ACA+L G+ VHG + K+ D +G +L+ MY CG + A +V
Sbjct: 103 PDNYTIPYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHV 162
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ + ++W+ MI+G G + A F+ E + D W +MISG+ Q
Sbjct: 163 FDEMP-RLSAVSWSVMISGYAKVGDVDSARLFFD----EAPEKDRGIWGAMISGYVQNSC 217
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
E LF +Q T +VP S+LSACA L AL +G H ++ R ++ ++T+
Sbjct: 218 FKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLSTS 277
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG A+R FD + D WNAMISG +G+ SA+++F M++ +K
Sbjct: 278 LLDMYAKCGNLELAKRLFDS--MPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIK 335
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P+ +F+AV +AC ++G + LQ+ M + ++PK EH+GC+VDLL R+G EA
Sbjct: 336 PDDITFIAVFTACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMV 395
Query: 309 LIREL-------PEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNI 361
+IR + E T++ + + L AC H + L E A +L +E + +V+LSN+
Sbjct: 396 MIRRITSTSWNGSEETLA-WRAFLSACCNHGQAQLAERAAKRLLRLENHSGV-YVLLSNL 453
Query: 362 YAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
YA G+ D R+R M+ ++ + K PG S+
Sbjct: 454 YAASGKHSDARRVRNMMRNKGVDKAPGCSS 483
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 92 GRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
G A +FE + H P N++I F G + F +F KM G+ P +
Sbjct: 53 GSLTYACRVFERIHH----PTLCICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTI 108
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ--- 208
VL ACA L LGK HG+ + L D + +L++MY CG AR FD+
Sbjct: 109 PYVLKACAALRDCSLGKMVHGYSSKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPR 168
Query: 209 -------------------------FEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLM 242
F+ P+ D W AMISGY +N ++ + +F L+
Sbjct: 169 LSAVSWSVMISGYAKVGDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLL 228
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSG 301
Q V P+ + FV++LSAC H G +D + I ++ L + ++D+ + G
Sbjct: 229 QLTHVVPDESIFVSILSACAHLGALDIGIWIHRYLNRKTVSLSIRLS--TSLLDMYAKCG 286
Query: 302 RLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE--MEPENPTPFVILS 359
L+ A+ L +PE + +++++ H + +M ++++ ++P++ T + +
Sbjct: 287 NLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVFT 346
Query: 360 NI-YAGLGR 367
Y+G+
Sbjct: 347 ACSYSGMAH 355
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 225/438 (51%), Gaps = 55/438 (12%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPC 64
L ++ + IS + AC+ L+ G ++H ++ E + D M+ T+L+DMY KCG +
Sbjct: 219 LGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDY 278
Query: 65 AHNVFQELKGSRNILTWNTMIAGM------------MLN--GRSEKAMELFEGLAHEGF- 109
A VF + S+NI+ WN MI GM M+N ++ L EG + GF
Sbjct: 279 AERVFNRIY-SKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFA 337
Query: 110 ------------------------------------KPDPATWNSMISGFSQLGMRFEAF 133
+ + +WN+M++ + Q EA
Sbjct: 338 IRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEAL 397
Query: 134 KLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMY 193
K+F+ + + + P + SVL A A+L++ GK+ H ++++ L + ++ A++ MY
Sbjct: 398 KMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMY 457
Query: 194 MKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSAS 253
KCG AR FFD K D WN MI Y +G ++++ F M+ + KPN ++
Sbjct: 458 AKCGDLQTAREFFDGMVCK--DVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGST 515
Query: 254 FVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
FV++L+AC +G +D+ F M ++G+ P EH+GCM+DLLGR+G LDEA+ I E+
Sbjct: 516 FVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEM 575
Query: 314 P-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVG 372
P PT ++ SLL A H + L E A + ++ +N +V+LSN+YA GRWEDV
Sbjct: 576 PLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVD 635
Query: 373 RIRQMINDRQLTKLPGIS 390
RI+ ++ ++ L K G S
Sbjct: 636 RIKYLMKEQGLVKTVGCS 653
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 151/359 (42%), Gaps = 59/359 (16%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
EC ++ TF VI AC LL L G++VHG +KI D + L+DMYLK G +
Sbjct: 116 ECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFI 175
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF E+ D +WNSM+SG
Sbjct: 176 ELAEKVFDEMPVR------------------------------------DLVSWNSMVSG 199
Query: 123 FSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKD 182
+ G + F++M G + S L AC+ L+ G E H VIR++L D
Sbjct: 200 YQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELD 259
Query: 183 ESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+ T+LI MY KCG+ +A R F++ I + WNAMI G +
Sbjct: 260 IMVQTSLIDMYGKCGKVDYAERVFNR--IYSKNIVAWNAMIGG---------------MQ 302
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
+ +KV P+ + + +L +C +G + + I L P +VD+ G+ G
Sbjct: 303 EDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFL-PYLVLETALVDMYGKCGE 361
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVILS 359
L A + ++ E + +++++ A ++ ++ +E Q + EP P I S
Sbjct: 362 LKLAEHVFNQMNEKNMVSWNTMVAA---YVQNEQYKEALKMFQHILNEPLKPDAITIAS 417
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N L + G + +G A+++FE + H D WN +I G++ G+ EA +
Sbjct: 57 NDLNITRDLCGFVESGLMGNALDMFEKMNHS----DTFIWNVIIRGYTNNGLFQEAIDFY 112
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M+ G+ V+ AC +L AL +G++ HG +I+ + D + LI MY+K
Sbjct: 113 YRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKI 172
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVA 256
G A + FD+ ++ D WN+M+SGY +G+ S++ F M + K + ++
Sbjct: 173 GFIELAEKVFDEMPVR--DLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMIS 230
Query: 257 VLSACGHAGHVDKALQIF-TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
L AC + ++I ++ + L + ++D+ G+ G++D A + +
Sbjct: 231 ALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGKCGKVDYAERVFNRIYS 288
Query: 316 PTVSVYHSLLGA 327
+ +++++G
Sbjct: 289 KNIVAWNAMIGG 300
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 207/386 (53%), Gaps = 11/386 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMY--LKCGCLPCA 65
P+S +F + A +Q GRQ+H +++ SD + TA V MY GC+ A
Sbjct: 75 RPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSGCICDA 134
Query: 66 HNVFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFS 124
+F + S ++ WN M+ G +G A +LFE + + +W ++I+G++
Sbjct: 135 RKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQR----NVISWTALITGYA 190
Query: 125 QLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADL-NKDE 183
Q +A LF +MQ + P + L+ACA L AL+LG+ ++ R L +
Sbjct: 191 QANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNI 250
Query: 184 SMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
+ ALI MY K G A + F+ K W MI+G +G A+E+F M+
Sbjct: 251 PLNNALIDMYAKSGDIKSALQVFENMNHKT--IITWTTMIAGLALHGLGTEALEMFSRME 308
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ +VKPN +F+A+LSAC H G V F M +G++PK EH+GCM+DLLGR+G L
Sbjct: 309 RARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHL 368
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA+ L+ ++P EP ++ SLL AC H + +LGE L E+EP+N + +LSNIY
Sbjct: 369 KEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSNIY 428
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPG 388
A GRW + +R+++ D + K+PG
Sbjct: 429 ASRGRWNESRVVRKVMWDAGVKKMPG 454
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/391 (34%), Positives = 211/391 (53%), Gaps = 47/391 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T ++S AS L G+ VHG+ +K+ S + AL+DMY KC + A +
Sbjct: 209 PSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALII 268
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F+ M+N + D +WNS+IS Q G
Sbjct: 269 FE------------------MIN------------------EKDIFSWNSIISVHEQCGD 292
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES---- 184
+LF+KM +G++P L +T+VL AC+ L+AL G+E HG++I L KD+
Sbjct: 293 HDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAV 352
Query: 185 ----MATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFD 240
++ A++ MY KCG + A + FD K D A WN MI GYG +G A+ +F
Sbjct: 353 DNLLVSNAVMDMYAKCGSMNNALKIFDSMSKK--DVASWNIMIMGYGMHGYALEALGMFS 410
Query: 241 LMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRS 300
M + + KPN + V VLSAC HAG V M+ FG+ P EH+ C++D+LGR+
Sbjct: 411 QMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRA 470
Query: 301 GRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
G L++A E+++++P + V+ +LLGAC H N++L E A ++ ++EPE+ +V++S
Sbjct: 471 GHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMS 530
Query: 360 NIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
N+Y +GR+E+V +R+ + ++ + K PG S
Sbjct: 531 NVYGVIGRYEEVLEVRKTMKEQNVKKTPGCS 561
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ TF V+ C ++ + +++HG LK+ + D +G+ALV+ YLK G + A V
Sbjct: 111 PDKYTFPCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKV 167
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F EL D WN+MI+G++++G
Sbjct: 168 FGELS------------------------------------IRDVVLWNAMINGYAKIGC 191
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
EA ++F +M G+ PS +T +LS A L GK HG V++ + S++ A
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA 251
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
LI MY KC A F+ I D WN++IS + + G+++ + +FD M +
Sbjct: 252 LIDMYGKCKHIGDALIIFEM--INEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGIL 309
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMM-------DDDFGLKPKQEHFGCMVDLLGRSG 301
P+ + VL AC H + +I M DD+ G ++D+ + G
Sbjct: 310 PDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCG 369
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
++ A ++ + + V+ ++ ++
Sbjct: 370 SMNNALKIFDSMSKKDVASWNIMI 393
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 142/320 (44%), Gaps = 48/320 (15%)
Query: 10 NSVT-FISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
N+VT ++ + +CA L G+Q+H L + T+L++MY KCG + A V
Sbjct: 9 NNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILV 68
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + RN+ +N +I+G + NG + K + ++ + EG PD T+
Sbjct: 69 FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTF------------ 116
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
V+ C ++ + K+ HG +++ L D + +A
Sbjct: 117 -----------------------PCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSA 150
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L++ Y+K G A++ F + I+ D WNAMI+GY + G + A+E+F M + V
Sbjct: 151 LVNTYLKNGSMEDAQKVFGELSIR--DVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVA 208
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTM---MDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
P+ + +LS G +D + + M D G+ ++D+ G+ + +
Sbjct: 209 PSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNA----LIDMYGKCKHIGD 264
Query: 306 ARELIRELPEPTVSVYHSLL 325
A + + E + ++S++
Sbjct: 265 ALIIFEMINEKDIFSWNSII 284
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 8 EPNSVTFISVISACASLLYLQFGR-------QVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
+PN VT + V+SAC ++ GR G+ IE T ++DM + G
Sbjct: 418 KPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHY------TCVIDMLGRAG 471
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKA 97
L A+ + Q++ N + W ++ L+G +E A
Sbjct: 472 HLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELA 508
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 149/448 (33%), Positives = 224/448 (50%), Gaps = 73/448 (16%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL----- 62
EPN TF SV+ AC + YL +G+ VHG+ K D + +AL+ Y +C +
Sbjct: 234 EPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDNAKA 293
Query: 63 -------PC-------------------AHNVFQELKGSRNILTWNTMIAGMMLNGRSEK 96
PC A +F +L+ +N +++N M+ G +GR E
Sbjct: 294 VYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLR-EKNPVSYNLMLKGYATSGRIEG 352
Query: 97 AMELFEGLAH--------------------EGFK--------PDPATWNSMISGFSQLGM 128
+ LFE + H + FK DP TWNSMISG Q
Sbjct: 353 SKRLFERMTHKTTSSLNTMISVYSRNGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQ 412
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
A KL+ M T + S +++ AC L ++LG+ H H IR + + + T+
Sbjct: 413 HEGALKLYITMCRTSVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTS 472
Query: 189 LISMYMKCG-----QPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQ 243
LI MY KCG Q S+A F P+ AF A+I+GY +G A +FD M
Sbjct: 473 LIDMYAKCGSIYDAQTSFASVCF------PNVAAF-TALINGYVHHGLGIEAFSVFDEML 525
Query: 244 QEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRL 303
+ KV PN A+ + +LSAC AG V + + +F M+ +G+ P EH+ C+VDLLGRSGRL
Sbjct: 526 KHKVPPNGATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRL 585
Query: 304 DEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIY 362
EA IR +P E ++ +LL ACW ++ +LGE +A K+ ++P+ + ++ILSNIY
Sbjct: 586 YEAEAFIRCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIY 645
Query: 363 AGLGRWEDVGRIRQMINDRQLTKLPGIS 390
A LG+W + +R+ + ++ K+ G S
Sbjct: 646 AKLGKWVEKINVRRQLMSLKVKKIRGCS 673
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 41/400 (10%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
C + + N TF S++S CA G+Q H L LK Q +G+ALV Y +
Sbjct: 95 HCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDI 154
Query: 63 PCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISG 122
A VF EL +N L W+ ++ G + + A++LF + D W +MIS
Sbjct: 155 SGAKQVFDELH-DKNDLLWDLLLVGYVKCNLMDDALDLFMKIP----TRDVVAWTTMISA 209
Query: 123 FSQLGMRFE-AFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLN 180
+++ + +LF M+ G V P+ SV+ AC + L GK HG + + +
Sbjct: 210 YARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILTKYGFH 269
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFE-----------------------------I 211
D S+ +ALI Y +C A+ +D E +
Sbjct: 270 FDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKL 329
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ +P +N M+ GY +G E + +F+ M + ++S ++S G +DKA
Sbjct: 330 REKNPVSYNLMLKGYATSGRIEGSKRLFERMTHK----TTSSLNTMISVYSRNGEIDKAF 385
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
++F + + + G L + R E + S + +L AC C
Sbjct: 386 KLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCL 445
Query: 332 LNSDLGEEMAMK-LQEMEPENPTPFVILSNIYAGLGRWED 370
LG+ + + ++E N L ++YA G D
Sbjct: 446 EYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYD 485
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 39/341 (11%)
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
NI++ N I+ + +G + A LF + +WN MISG+S+ G EA L
Sbjct: 36 NIISTNIYISRHVRDGHLDLAQTLFNEMPVRSV----VSWNIMISGYSKFGKYSEALNLA 91
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M + + +S+LS CA GK+ H V+++ L E + +AL+ Y
Sbjct: 92 SEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALVYFYANI 151
Query: 197 GQPSWARRFFDQFEIKPD-----------------------------DPAFWNAMISGYG 227
S A++ FD+ K D D W MIS Y
Sbjct: 152 NDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTTMISAYA 211
Query: 228 RN-GEYESAVEIFDLMQQE-KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
R+ + +E+F M+ +V+PN +F +V+ ACG ++ + ++ +G
Sbjct: 212 RSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGIL-TKYGFHF 270
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQ 345
++ + +D A+ + + P + +SLL + EE+ KL+
Sbjct: 271 DHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEEIFCKLR 330
Query: 346 EMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKL 386
E +NP + ++ YA GR E R+ + + + + L
Sbjct: 331 E---KNPVSYNLMLKGYATSGRIEGSKRLFERMTHKTTSSL 368
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S E + TF ++ AC L Y+Q G+ +H ++ S+ +GT+L+DMY KCG + A
Sbjct: 427 SVERSRSTFSALFQACTCLEYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDA 486
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
F + N+ + +I G + +G +A +F+ + P+ AT ++S S
Sbjct: 487 QTSFASV-CFPNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSC 545
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
GM E +F M+ G++P+L+ CV +L
Sbjct: 546 AGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLL 579
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 208/381 (54%), Gaps = 40/381 (10%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
T SV++A + L GRQ HG+ +K ++ +G+ L+D+Y KC
Sbjct: 245 TMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKC------------- 291
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL-GMRFE 131
AG M+ R ++FE + PD WN+MISGFS + +
Sbjct: 292 -------------AGSMVECR-----KVFEEIT----APDLVLWNTMISGFSLYEDLSED 329
Query: 132 AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDE-SMATALI 190
F +MQ G P V SAC++LS+ LGK+ H I++D+ + S+ AL+
Sbjct: 330 GLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALV 389
Query: 191 SMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPN 250
+MY KCG ARR FD + + N+MI+GY ++G ++ +F+LM ++ + PN
Sbjct: 390 AMYSKCGNVHDARRVFDT--MPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPN 447
Query: 251 SASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELI 310
S +F+AVLSAC H G V++ + F MM + F ++P+ EH+ CM+DLLGR+G+L EA +I
Sbjct: 448 SITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERII 507
Query: 311 RELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWE 369
+P P + +LLGAC H N +L + A + +EP N P+V+LSN+YA RWE
Sbjct: 508 ETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWE 567
Query: 370 DVGRIRQMINDRQLTKLPGIS 390
+ +++++ +R + K PG S
Sbjct: 568 EAATVKRLMRERGVKKKPGCS 588
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 166/386 (43%), Gaps = 23/386 (5%)
Query: 8 EPNSVTFISVISACASL----LYLQFGRQVHGLTLKIEKQSDTMIGTALVD-----MYLK 58
+P+ V++ ++I+A A L+ +V L L ++ + + + TA D L
Sbjct: 103 QPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLH 162
Query: 59 CGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
C + C H+ + + N ++A G +A +F + EG D +WN+
Sbjct: 163 CFVVVCGHDCYASVN--------NAVLACYSRKGFLSEARRVFREMG-EGGGRDEVSWNA 213
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI Q EA LF +M G+ + + SVL+A + L G++ HG +I++
Sbjct: 214 MIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSG 273
Query: 179 LNKDESMATALISMYMKC-GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEY-ESAV 236
+ + + + LI +Y KC G R+ F+ EI D WN MISG+ + E +
Sbjct: 274 FHGNSHVGSGLIDLYSKCAGSMVECRKVFE--EITAPDLVLWNTMISGFSLYEDLSEDGL 331
Query: 237 EIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDL 296
F MQ+ +P+ SFV V SAC + Q+ + + +V +
Sbjct: 332 WCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAM 391
Query: 297 LGRSGRLDEARELIRELPE-PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
+ G + +AR + +PE TVS+ + G + + + L++ N F
Sbjct: 392 YSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITF 451
Query: 356 VILSNIYAGLGRWEDVGRIRQMINDR 381
+ + + G+ E+ + M+ +R
Sbjct: 452 IAVLSACVHTGKVEEGQKYFNMMKER 477
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 155/344 (45%), Gaps = 12/344 (3%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
TF +++ AC + L G+ +H L K T + +Y KCG L A F L
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFH-L 69
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
N+ ++NT+I + A +F+ + +PD ++N++I+ ++ G
Sbjct: 70 TQYPNVFSYNTLINAYAKHSLIHIARRVFDEIP----QPDIVSYNTLIAAYADRGECGPT 125
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
+LFE+++ + ++ V++AC D + L ++ H V+ + S+ A+++
Sbjct: 126 LRLFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLAC 183
Query: 193 YMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNS 251
Y + G S ARR F + E D WNAMI G++ E AV +F M + +K +
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243
Query: 252 ASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR-SGRLDEARELI 310
+ +VL+A + Q MM G ++DL + +G + E R++
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKS-GFHGNSHVGSGLIDLYSKCAGSMVECRKVF 302
Query: 311 RELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
E+ P + ++++++ L DL E+ +EM+ P
Sbjct: 303 EEITAPDLVLWNTMISG--FSLYEDLSEDGLWCFREMQRNGFRP 344
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/391 (36%), Positives = 211/391 (53%), Gaps = 11/391 (2%)
Query: 5 LSD--EPNSVTFISVISACASLLYLQFGRQVHGLT-LKIEKQSDTMIGTALVDMYLKCGC 61
LSD P+ VT I ++SAC L L FG +H L K SD ++ AL+DMY KCG
Sbjct: 229 LSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLV-VALIDMYAKCGD 287
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
A VF L R WN MI G G + A LF+ + D T+NS+I+
Sbjct: 288 TGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDH----DVITFNSLIT 343
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ G EA LF KM+ G+ + +L+A A L AL G+ H + + + +
Sbjct: 344 GYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVER 403
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D + TAL+ MYMKCG+ A F Q ++ D W+AMI G NG ++A+E F
Sbjct: 404 DVYLGTALLDMYMKCGRVEEAMVAFKQMSVR--DVHTWSAMIGGLAFNGMGKAALEHFFW 461
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
M+ + NS +++AVL+AC H+ +D+ F M ++P+ EH+GCM+DLLGRSG
Sbjct: 462 MKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSG 521
Query: 302 RLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSN 360
LDEA +L++ +P +P ++ S+L AC H N DL + A L ++EP +V + N
Sbjct: 522 LLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYN 581
Query: 361 IYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
IY +WED +IR+++ R + K G S+
Sbjct: 582 IYIDSRQWEDASKIRRLMEKRGVKKTAGYSS 612
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 126/271 (46%), Gaps = 12/271 (4%)
Query: 9 PNSVTFISVISACA-SLLYLQFGRQVHGLTLKIEKQSDT-MIGTALVDMYLKCGCLPCAH 66
P++ TF + CA ++ GR +H + S +I + ++ MY + G A
Sbjct: 101 PDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDAR 160
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
F E ++++ W T+I+G+ G + A L LA + + TW +ISG+S+
Sbjct: 161 RAFDE-ASVKDVVAWTTVISGLAKMGLLDDARRL---LARAPVR-NVVTWTGLISGYSRA 215
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G EA F M S G+ P V +LSAC L L G H V + + +
Sbjct: 216 GRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLV 275
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
ALI MY KCG AR FD + P WNAMI GY + G + A +FD M+
Sbjct: 276 VALIDMYAKCGDTGRAREVFDALG-RGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHD 334
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
V +F ++++ H G + +AL +FT M
Sbjct: 335 V----ITFNSLITGYIHGGRLREALLLFTKM 361
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 37/218 (16%)
Query: 135 LFEKMQSTGMVPSLKCVTSVLSACADLSA-LKLGKETHGHVIRADLNKDESM-ATALISM 192
L+ +M + P + CA A + LG+ H R L + A+ +I M
Sbjct: 90 LYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHM 149
Query: 193 YMKCGQPSWARRFFDQFEIKP-----------------DDP------------AFWNAMI 223
Y + G P ARR FD+ +K DD W +I
Sbjct: 150 YAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLI 209
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
SGY R G AV+ F+ M + + P+ + + +LSACG ++ + ++ D L
Sbjct: 210 SGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRML 269
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIREL-----PEP 316
+ ++D+ + G ARE+ L P+P
Sbjct: 270 MSDKLVVA-LIDMYAKCGDTGRAREVFDALGRGRGPQP 306
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 3 ECLSDEPNSVTFISVISACA-------SLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDM 55
+C NSVT+I+V++AC+ LY R +H + +IE ++D+
Sbjct: 463 KCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYG------CMIDL 516
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
+ G L A ++ Q + N + W ++++ R K ++L + AH K +PA
Sbjct: 517 LGRSGLLDEAMDLVQTMPMQPNAVIWASILSAC----RVHKNVDLAQNAAHHLLKLEPA 571
>gi|302798817|ref|XP_002981168.1| hypothetical protein SELMODRAFT_114142 [Selaginella moellendorffii]
gi|300151222|gb|EFJ17869.1| hypothetical protein SELMODRAFT_114142 [Selaginella moellendorffii]
Length = 463
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 210/393 (53%), Gaps = 37/393 (9%)
Query: 3 ECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCL 62
+C +P+ V+FI+ + AC +L L GR +H SD ++G ALV+MY +CG L
Sbjct: 53 DCEGVKPDIVSFINTLRACTNLEDLSEGRGIHRRLSAEGLDSDVIVGNALVNMYSRCGYL 112
Query: 63 PCAHNVF---------------------QELKGSRNI---------LTWNTMIAGMMLNG 92
A +VF + L+ +R + +TW T+I+ G
Sbjct: 113 EEARDVFDRSYVGDAVLDSAVVNMYTKCKSLERARRVFDRMQLKTEVTWTTLISAYAQQG 172
Query: 93 RS-EKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCV 151
+ E A +F+ + TWN++++ + Q G EA +L+++M+ G+ P
Sbjct: 173 QDLENARAVFDRMTTRTV----VTWNTLLTAYGQHGHSEEAIRLYQRMEPDGVEPDEITY 228
Query: 152 TSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEI 211
+++ AC D+ +L G+ H ++RA L ++TAL+SMY KCG AR+ FD ++
Sbjct: 229 VTIVGACGDMQSLAEGRPVHDRIVRAGLENGALLSTALVSMYGKCGSLDEARKIFDGSDL 288
Query: 212 KPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKAL 271
+ WNAMI Y +NGE + +E+++LM + V+PN ++ VL AC H G +D+A
Sbjct: 289 S--NLVSWNAMIVAYAQNGEGKQGLELYELMNLDGVEPNGVTYTGVLFACAHVGLLDEAW 346
Query: 272 QIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCH 331
+ F + D G++ + EHF CM D+LGR GRL+EA E ++ P+ + SLL +C H
Sbjct: 347 KQFVSLKTDRGIEWEDEHFSCMTDMLGRLGRLEEAEEFLKRFPQAGGVPWLSLLNSCQMH 406
Query: 332 LNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
+ + G+ ++ + + PE + +V+LSNIYA
Sbjct: 407 GDLERGKRVSQEAMKRNPETSSSYVMLSNIYAA 439
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 19/260 (7%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
+V YLKC L A +F+ L+ S+ + W +I G + +A+E F L EG KP
Sbjct: 1 MVSTYLKCEGLEEAREIFERLE-SKGLFAWTAIIGACAQRGHNREALEFFHRLDCEGVKP 59
Query: 112 DPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSL---KCVTSVLSACADLSALKLGK 168
D ++ + + + L E + ++ + G+ + + ++ S C L +
Sbjct: 60 DIVSFINTLRACTNLEDLSEGRGIHRRLSAEGLDSDVIVGNALVNMYSRCGYLEEAR--- 116
Query: 169 ETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGR 228
V D + +A+++MY KC ARR FD+ ++K + W +IS Y +
Sbjct: 117 ----DVFDRSYVGDAVLDSAVVNMYTKCKSLERARRVFDRMQLKTE--VTWTTLISAYAQ 170
Query: 229 NGE-YESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQ 287
G+ E+A +FD M V ++ +L+A G GH ++A++++ M+ D G++P +
Sbjct: 171 QGQDLENARAVFDRMTTRTV----VTWNTLLTAYGQHGHSEEAIRLYQRMEPD-GVEPDE 225
Query: 288 EHFGCMVDLLGRSGRLDEAR 307
+ +V G L E R
Sbjct: 226 ITYVTIVGACGDMQSLAEGR 245
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ SV+ ACA+L L++G VH +K SD + + +VDMY KCG + A
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + G + + +WN+++SGFS
Sbjct: 509 LHDRIGGQQVV------------------------------------SWNAILSGFSLNK 532
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F +M G+ P +VL CA+L+ ++LGK+ HG +I+ ++ DE +++
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ E + D WNAMI GY +G A+ +F+ MQ+E V
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFERMQKENV 650
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FVAVL AC H G D + F +M + L+P+ EHF CMVD+LGRS EA
Sbjct: 651 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I +P + ++ +LL C + ++ E A + ++P++ + +++LSN+YA G
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 770
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R R+++ +L K PG S
Sbjct: 771 KWADVSRTRRLLKQGRLKKEPGCS 794
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 163/381 (42%), Gaps = 60/381 (15%)
Query: 10 NSVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ V+ V SACA Y Q G+QVH L +K D + A++D+Y KC L A+ +
Sbjct: 350 DVVSLSGVFSACAETKGYFQ-GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ +K + D +WN++I+ Q G
Sbjct: 409 FQGMK------------------------------------QKDSVSWNAIIAALEQNGH 432
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F +M GM P SVL ACA L +L+ G H VI++ L D +A+
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG A++ D+ I WNA++SG+ N E E A + F M +K
Sbjct: 493 VVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
P+ +F VL C + ++ QI M+DD++ +VD+ + G
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST-------LVDMYAKCGD 603
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP----FVIL 358
+ ++ + ++ + +++++ H LG E + M+ EN P FV +
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALH---GLGVEALRMFERMQKENVVPNHATFVAV 660
Query: 359 SNIYAGLGRWEDVGRIRQMIN 379
+ +G ++D R ++
Sbjct: 661 LRACSHVGLFDDGCRYFHLMT 681
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 20/324 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-------SDTMIGTALVDMYLKCGC 61
P VTF V +CA Q GR+ + + L+ MY +C
Sbjct: 13 PARVTFSRVFQSCA-----QAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAG 67
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
CA VF + R+ ++WNTM+ G A+ LF+G+ PD +WN+++S
Sbjct: 68 AACARRVFDAMP-RRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNALVS 122
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ Q GM E+ LF +M G+ P +L +C+ L L LG + H ++ L
Sbjct: 123 GYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEI 182
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D +AL+ MY KC A FF + + + W A I+G +N +Y +E+F
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFF--YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 240
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ + + S+ + +C ++ Q+ + + +VD+ ++
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKAN 299
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
L +AR LP TV ++++
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMM 323
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 53/299 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF +V+ CA+L ++ G+Q+HG +K E D I + LVDMY KCG +P +
Sbjct: 550 KPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLL 609
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ R+ ++WN MI G L+G +A+ +FE + E P+ AT+ +++ S +G
Sbjct: 610 VFEKVE-KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 668
Query: 128 MRFEAFKLFEKM---------------------QSTGMVPSLKCVTS------------V 154
+ + + F M +S G ++K + S +
Sbjct: 669 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 728
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA-----RRFFDQF 209
LS C +++ + +V+ D + D S+ L ++Y + G+ WA RR Q
Sbjct: 729 LSICKIRQDVEIAELAASNVLLLDPD-DSSVYILLSNVYAESGK--WADVSRTRRLLKQG 785
Query: 210 EIKPDDPAFWNAMIS----------GYGRNGE-YESAVEIFDLMQQEKVKPNSASFVAV 257
+K + W + S + R+GE YE ++ M+ +P+SASFV V
Sbjct: 786 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 41/348 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ S +CA++ L GRQ+H +K + SD ++GTA+VD+Y K L
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT--------- 302
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
A F GL + + T N+M+ G + G+ EA
Sbjct: 303 -----------------------DARRAFFGLPNHTVE----TSNAMMVGLVRAGLGIEA 335
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF+ M + + + ++ V SACA+ G++ H I++ + D + A++ +
Sbjct: 336 MGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F +K D WNA+I+ +NG Y+ + F+ M + +KP+
Sbjct: 396 YGKCKALMEAYLIFQG--MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 453
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++ +VL AC ++ L + + GL +VD+ + G +DEA++L
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL 358
+ V ++++L + S+ ++ ++ +M +P++ T +L
Sbjct: 513 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF 239
+D +++ Y G S A FD PD D WNA++SGY + G ++ +V++F
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGM---PDPDVVSWNALVSGYCQRGMFQESVDLF 137
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M + V P+ +F +L +C + +Q+ + GL+ +VD+ G+
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGK 196
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
LD+A +PE + + + C + G E+ +++Q +
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 244
>gi|388518129|gb|AFK47126.1| unknown [Medicago truncatula]
Length = 447
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 133/385 (34%), Positives = 199/385 (51%), Gaps = 41/385 (10%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T V+ A + +Q G+QVH +K+ QS+ + +++Y K G AH V
Sbjct: 95 PDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKV 154
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E HE P +WN++ISG SQ G+
Sbjct: 155 FDE---------------------------------NHE---PKLGSWNALISGLSQGGL 178
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDES--MA 186
+A +F M+ G P + SV+ AC + L L + H +V +A N+ M+
Sbjct: 179 AMDAIVVFVDMKRHGFEPDGITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILMS 238
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
+LI MY KCG+ A F E + + + W +MI GY +G + A+ F M++
Sbjct: 239 NSLIDMYGKCGRMDLAYEVFATMEDR--NVSSWTSMIVGYAMHGHAKEALGCFHCMRESG 296
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
VKPN +F+ VLSAC H G V + F MM + +G+ P+ +H+GCMVDLLGR+G D+A
Sbjct: 297 VKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDA 356
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
R ++ E+P +P V+ L+GAC H N D+ E +A LQ +EP N +V+LSNIYA
Sbjct: 357 RRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANK 416
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G W++V RIR + + +L K+P S
Sbjct: 417 GLWKEVERIRSFMKEGRLAKIPAYS 441
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 141/291 (48%), Gaps = 23/291 (7%)
Query: 83 TMIAGMMLNGRSEKAMELFEGLAH----EGFKPDPAT--WNSMISGFSQLGMRFEAFKLF 136
T+IA ++ N + + +L + AH + +PA+ WN++I +++L A +++
Sbjct: 28 TVIATLLSN--TTRIRDLNQIYAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIY 85
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
M G++P + VL A + A++LG++ H + I+ L +E + I++Y K
Sbjct: 86 VSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKA 145
Query: 197 GQPSWARRFFDQFEIKPDDPAF--WNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASF 254
G A + FD+ +P WNA+ISG + G A+ +F M++ +P+ +
Sbjct: 146 GDFDSAHKVFDE----NHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHGFEPDGITM 201
Query: 255 VAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF----GCMVDLLGRSGRLDEARELI 310
V+V+ ACG G + ALQ+ + F K + ++D+ G+ GR+D A E+
Sbjct: 202 VSVMCACGSIGDLYLALQLHKYV---FQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVF 258
Query: 311 RELPEPTVSVYHSLL--GACWCHLNSDLGEEMAMKLQEMEPENPTPFVILS 359
+ + VS + S++ A H LG M+ ++P T +LS
Sbjct: 259 ATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLS 309
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMI--GTALVDMYLKCGCLPCA 65
EP+ +T +SV+ AC S+ L Q+H + + T+I +L+DMY KCG + A
Sbjct: 195 EPDGITMVSVMCACGSIGDLYLALQLHKYVFQAKTNEWTVILMSNSLIDMYGKCGRMDLA 254
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+ VF ++ RN+ +W +MI G ++G +++A+ F + G KP+ T+ ++S
Sbjct: 255 YEVFATME-DRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVH 313
Query: 126 LGMRFEAFKLFEKMQST-GMVPSLK 149
G E F+ M++ G+ P L+
Sbjct: 314 GGTVQEGRFYFDMMKNIYGITPQLQ 338
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 217/387 (56%), Gaps = 15/387 (3%)
Query: 10 NSVTFISVISACASLLYLQ-FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ TF V +AC+ L+ +G VHG+ +K +SD +G +LV+MY + A V
Sbjct: 155 DKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRV 214
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ R+++TW +++ G + G +A ELF+ + + +W M++G+ +G
Sbjct: 215 FDEMP-QRDVITWTSVVKGYAMRGELVRARELFDMMPGR----NDVSWAVMVAGY--VGH 267
Query: 129 RF--EAFKLFEKMQSTGMV-PSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
RF EA + F M V P+ + S+LSACA L AL GK H ++ + + ++
Sbjct: 268 RFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNI 327
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+TALI MY KCG+ ARR FD + D W +MISG +G + F M E
Sbjct: 328 STALIDMYAKCGRIDCARRVFDGLHKR--DLLTWTSMISGLSMHGLGAECLWTFSEMLAE 385
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
KP+ + + VL+ C H+G V++ L IF M +G+ PK EH+GC++DLLGR+GRL+
Sbjct: 386 GFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLES 445
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEP-ENPTPFVILSNIYA 363
A E I+ +P EP V + +LL AC H + DLGE + + E+ P + +V+LSN+YA
Sbjct: 446 AFEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYA 505
Query: 364 GLGRWEDVGRIRQMINDRQLTKLPGIS 390
+G+WE V ++R+ ++ R PG S
Sbjct: 506 SMGQWESVTKVRKAMSQRGSEGCPGCS 532
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 22/257 (8%)
Query: 3 ECLSD-------EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDM 55
+C +D +PN +S++SACA L L G+ +H K + I TAL+DM
Sbjct: 275 QCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDM 334
Query: 56 YLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPAT 115
Y KCG + CA VF L R++LTW +MI+G+ ++G + + F + EGFKPD T
Sbjct: 335 YAKCGRIDCARRVFDGLH-KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDIT 393
Query: 116 WNSMISGFSQLGMRFEAFKLFEKMQST-GMVPSLK---CVTSVLSACADLSALKLGKETH 171
+++G S G+ E +F M G+VP L+ C+ +L L E+
Sbjct: 394 LLGVLNGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRL-------ESA 446
Query: 172 GHVIRA-DLNKDESMATALISMYMKCGQPSWARRFFDQF-EIKPDDPAFWNAMISG-YGR 228
I++ + D AL+S G R + E+ P ++S Y
Sbjct: 447 FEAIKSMPMEPDVVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYAS 506
Query: 229 NGEYESAVEIFDLMQQE 245
G++ES ++ M Q
Sbjct: 507 MGQWESVTKVRKAMSQR 523
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ SV+ ACA+L L++G VH +K SD + + +VDMY KCG + A
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 508
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + G + + +WN+++SGFS
Sbjct: 509 LHDRIGGQQVV------------------------------------SWNAILSGFSLNK 532
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F +M G+ P +VL CA+L+ ++LGK+ HG +I+ ++ DE +++
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ E + D WNAMI GY +G A+ +F+ MQ+E V
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFERMQKENV 650
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FVAVL AC H G D + F +M + L+P+ EHF CMVD+LGRS EA
Sbjct: 651 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I +P + ++ +LL C + ++ E A + ++P++ + +++LSN+YA G
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 770
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R R+++ +L K PG S
Sbjct: 771 KWADVSRTRRLLKQGRLKKEPGCS 794
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 163/381 (42%), Gaps = 60/381 (15%)
Query: 10 NSVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ V+ V SACA Y Q G+QVH L +K D + A++D+Y KC L A+ +
Sbjct: 350 DVVSLSGVFSACAETKGYFQ-GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 408
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ +K + D +WN++I+ Q G
Sbjct: 409 FQGMK------------------------------------QKDSVSWNAIIAALEQNGH 432
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F +M GM P SVL ACA L +L+ G H VI++ L D +A+
Sbjct: 433 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 492
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG A++ D+ I WNA++SG+ N E E A + F M +K
Sbjct: 493 VVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 550
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
P+ +F VL C + ++ QI M+DD++ +VD+ + G
Sbjct: 551 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST-------LVDMYAKCGD 603
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP----FVIL 358
+ ++ + ++ + +++++ H LG E + M+ EN P FV +
Sbjct: 604 MPDSLLVFEKVEKRDFVSWNAMICGYALH---GLGVEALRMFERMQKENVVPNHATFVAV 660
Query: 359 SNIYAGLGRWEDVGRIRQMIN 379
+ +G ++D R ++
Sbjct: 661 LRACSHVGLFDDGCRYFHLMT 681
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 142/324 (43%), Gaps = 20/324 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-------SDTMIGTALVDMYLKCGC 61
P VTF V +CA Q GR+ + + + L+ MY +C
Sbjct: 13 PARVTFSRVFQSCA-----QAGREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAG 67
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
CA VF + R+ ++WNTM+ G A+ LF+G+ PD +WN+++S
Sbjct: 68 AACARRVFDAMP-RRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNALVS 122
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ Q GM E+ LF +M G+ P +L +C+ L L LG + H ++ L
Sbjct: 123 GYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEI 182
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D +AL+ MY KC A FF + + + W A I+G +N +Y +E+F
Sbjct: 183 DVRTGSALVDMYGKCRSLDDALCFF--YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 240
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ + + S+ + +C ++ Q+ + + +VD+ ++
Sbjct: 241 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKAN 299
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
L +AR LP TV ++++
Sbjct: 300 SLTDARRAFFGLPNHTVETSNAMM 323
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 53/299 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF +V+ CA+L ++ G+Q+HG +K E D I + LVDMY KCG +P +
Sbjct: 550 KPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLL 609
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ R+ ++WN MI G L+G +A+ +FE + E P+ AT+ +++ S +G
Sbjct: 610 VFEKVE-KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 668
Query: 128 MRFEAFKLFEKM---------------------QSTGMVPSLKCVTS------------V 154
+ + + F M +S G ++K + S +
Sbjct: 669 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 728
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA-----RRFFDQF 209
LS C +++ + +V+ D + D S+ L ++Y + G+ WA RR Q
Sbjct: 729 LSICKIRQDVEIAELAASNVLLLDPD-DSSVYILLSNVYAESGK--WADVSRTRRLLKQG 785
Query: 210 EIKPDDPAFWNAMIS----------GYGRNGE-YESAVEIFDLMQQEKVKPNSASFVAV 257
+K + W + S + R+GE YE ++ M+ +P+SASFV V
Sbjct: 786 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 844
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 41/348 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ S +CA++ L GRQ+H +K + SD ++GTA+VD+Y K L
Sbjct: 252 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT--------- 302
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
A F GL + + T N+M+ G + G+ EA
Sbjct: 303 -----------------------DARRAFFGLPNHTVE----TSNAMMVGLVRAGLGIEA 335
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF+ M + + + ++ V SACA+ G++ H I++ + D + A++ +
Sbjct: 336 MGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 395
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F +K D WNA+I+ +NG Y+ + F+ M + +KP+
Sbjct: 396 YGKCKALMEAYLIFQG--MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 453
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++ +VL AC ++ L + + GL +VD+ + G +DEA++L
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 512
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL 358
+ V ++++L + S+ ++ ++ +M +P++ T +L
Sbjct: 513 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 560
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 5/168 (2%)
Query: 181 KDESMATALISMYMKCGQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIF 239
+D +++ Y G S A FD PD D WNA++SGY + G ++ +V++F
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGM---PDPDVVSWNALVSGYCQRGMFQESVDLF 137
Query: 240 DLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGR 299
M + V P+ +F +L +C + +Q+ + GL+ +VD+ G+
Sbjct: 138 VEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGK 196
Query: 300 SGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
LD+A +PE + + + C + G E+ +++Q +
Sbjct: 197 CRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 244
>gi|449434296|ref|XP_004134932.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449479547|ref|XP_004155632.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 638
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 209/383 (54%), Gaps = 7/383 (1%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
PN T V+ AC++ ++ G QV +K+ D + AL+ +Y C + A V
Sbjct: 131 PNKHTLTFVLQACSNAFAIREGAQVQTHVIKLGFVKDVFVRNALIHLYCTCCRVESAKQV 190
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F E+ SR++++WN+MI G + G+ A +LF + + D +W ++ISG Q G
Sbjct: 191 FDEVPSSRDVVSWNSMIVGFVRLGQISVAQKLFVEMP----EKDVISWGTIISGCVQNGE 246
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+A F+++ + P+ + S+L+A A L L+ GK H S+ TA
Sbjct: 247 LEKALDYFKELGEQKLRPNEAILVSLLAAAAQLGTLEYGKRIHSIANSLRFPMTASLGTA 306
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
L+ MY KCG +R FD+ K D WN MI G +G + A+ +F+ +
Sbjct: 307 LVDMYAKCGCIDESRFLFDRMPEK--DKWSWNVMICGLATHGLGQEALALFEKFLTQGFH 364
Query: 249 PNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARE 308
P + +F+ VL+AC AG V + F +M D +G++P+ EH+GCMVDLL R+G + +A E
Sbjct: 365 PVNVTFIGVLTACSRAGLVSEGKHFFKLMTDTYGIEPEMEHYGCMVDLLSRAGFVYDAVE 424
Query: 309 LIRELPEPTVSV-YHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGR 367
+I +P P V + S+LG+C H +LGEE+ KL +M+P + +V L+ I+A L +
Sbjct: 425 MINRMPAPPDPVLWASVLGSCQVHGFIELGEEIGNKLIQMDPTHNGHYVQLARIFARLRK 484
Query: 368 WEDVGRIRQMINDRQLTKLPGIS 390
WEDV ++R+++ +R K+ G S
Sbjct: 485 WEDVSKVRRLMAERNSNKIAGWS 507
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 209/372 (56%), Gaps = 9/372 (2%)
Query: 20 ACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNIL 79
AC+++ L+ G+QVH L +K Q ++ + AL+ +Y K + +F + ++ +
Sbjct: 427 ACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMT-VKDTV 485
Query: 80 TWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKM 139
++N+ ++ ++ N ++A ++F + PD +W ++IS +Q EA ++F M
Sbjct: 486 SYNSFMSALVQNNLFDEARDVFNNMP----SPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Query: 140 QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQP 199
+P+ +T +L +L A +LG++ H I+ ++ +A AL+SMY KC
Sbjct: 542 LHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSA 601
Query: 200 SWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLS 259
+ + FD E + D WN +I+GY ++G A+ ++ LM V PN +FV +L
Sbjct: 602 D-SLKVFDSMEER--DIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLH 658
Query: 260 ACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTV 318
AC H+G VD+ Q F M D+GL P EH+ CMVDLLGR+G + A I ++P EP
Sbjct: 659 ACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDS 718
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMI 378
++ +LLGAC H N ++G A KL +EP N +V+LSNIY+ G W++V ++R+++
Sbjct: 719 VIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLM 778
Query: 379 NDRQLTKLPGIS 390
+R + K PG S
Sbjct: 779 KERGVNKDPGCS 790
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 145/332 (43%), Gaps = 64/332 (19%)
Query: 4 CLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLP 63
C P +SV+SA L +H L K + D ++GTA+++ Y K +
Sbjct: 216 CEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNML 275
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE---------------GLAHEG 108
+ F E +RN TW+T+IA + GR + A +++ GLA G
Sbjct: 276 DSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYG 335
Query: 109 ------------FKPDPATWNSMISGFSQLGMRFEAFKLFEKM----------------- 139
+P+ +WN+MI+G+ Q M EA LF +M
Sbjct: 336 RIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAGYAR 395
Query: 140 --------------QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
GM+PSL +TS AC+++ AL+ GK+ H ++A + +
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
ALI++Y K R+ FD+ +K D +N+ +S +N ++ A ++F+ M
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRMTVK--DTVSYNSFMSALVQNNLFDEARDVFNNMP-- 511
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMM 277
P+ S+ ++SAC A ++A++IF M
Sbjct: 512 --SPDVVSWTTIISACAQADQGNEAVEIFRSM 541
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 17/271 (6%)
Query: 45 DTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGL 104
+T+ A+V Y++ G + A +F + SR++ +WNTM+ G + E+A LFE +
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMP-SRDVSSWNTMLTGYCHSQLMEEARNLFERM 183
Query: 105 AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSAL 164
+ +W MISG+ + A+ +F M GM P + SVLSA L
Sbjct: 184 PER----NGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKP 239
Query: 165 KLGKETHGHVIRADLNKDESMATALISMYMK-CGQPSWARRFFDQFEIKPDDPAFWNAMI 223
+ + H V + +D + TA+++ Y K A +FF+ + + W+ +I
Sbjct: 240 GILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAAR--NEYTWSTII 297
Query: 224 SGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGL 283
+ + G + A F + Q++ +K + S ++L+ G +D A +F + +
Sbjct: 298 AALSQAGRIDDA---FAVYQRDPLK-SVPSRTSMLTGLARYGRIDDAKILFDQIHE---- 349
Query: 284 KPKQEHFGCMVDLLGRSGRLDEARELIRELP 314
P + M+ ++ +DEA +L +P
Sbjct: 350 -PNVVSWNAMITGYMQNEMVDEAEDLFNRMP 379
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 139/374 (37%), Gaps = 80/374 (21%)
Query: 58 KCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWN 117
+ G L A VF + R+I+ WN+MI NG + L + ++ + T
Sbjct: 45 RLGRLHEAREVFDSMP-FRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNLR----TGT 99
Query: 118 SMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRA 177
++SG+++ G +A ++F+ M V VT + A KL A
Sbjct: 100 ILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKL--------FDA 151
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVE 237
++D S +++ Y AR F++ + + W MISGY ++ A +
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPER--NGVSWTVMISGYVLIEQHGRAWD 209
Query: 238 IFDLMQQEKVKPNSASFVAVLSACGHAG--------HV---------------------- 267
+F M E + P + V+VLSA H G HV
Sbjct: 210 MFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYT 269
Query: 268 ------DKALQIFTMM---------------------DDDFGLKPKQ-----EHFGCMVD 295
D A++ F M DD F + + M+
Sbjct: 270 KDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLT 329
Query: 296 LLGRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPF 355
L R GR+D+A+ L ++ EP V +++++ ++ +++ +E M N +
Sbjct: 330 GLARYGRIDDAKILFDQIHEPNVVSWNAMITG---YMQNEMVDEAEDLFNRMPFRNTISW 386
Query: 356 VILSNIYAGLGRWE 369
+ YA GR E
Sbjct: 387 AGMIAGYARNGRSE 400
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 218/387 (56%), Gaps = 42/387 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAH 66
+P+ +T +S+ S A + R VHG ++ D +IG A+VDMY K G L AH
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 67 NVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
VF+ + D +WN++I+G++Q
Sbjct: 474 KVFEIIP------------------------------------VKDVISWNTLITGYAQN 497
Query: 127 GMRFEAFKLFEKMQSTG-MVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G+ EA ++++ M+ ++P+ S+L A A + AL+ G + HG VI+ +L+ D +
Sbjct: 498 GLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFV 557
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
AT LI +Y KCG+ A F +++ + WNA+IS +G +G E +++F M E
Sbjct: 558 ATCLIDVYGKCGRLVDAMSLF--YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDE 615
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
VKP+ +FV++LSAC H+G V++ F +M + +G+KP +H+GCMVDLLGR+G L+
Sbjct: 616 GVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYLEM 674
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A + I+++P +P S++ +LLGAC H N +LG+ + +L E++ +N +V+LSNIYA
Sbjct: 675 AYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYAN 734
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
+G+WE V ++R + +R L K PG S
Sbjct: 735 VGKWEGVDKVRSLARERGLKKTPGWST 761
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+EC PN T++S++ A A + LQ G ++HG +K D + T L+D+Y KCG
Sbjct: 510 MEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCG 569
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMI 120
L A ++F ++ ++ TWN +I+ ++G +EK ++LF + EG KPD T+ S++
Sbjct: 570 RLVDAMSLFYQVPQESSV-TWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 628
Query: 121 SGFSQLGMRFEAFKLFEKMQSTGMVPSLK---CVTSVLSACADLSALKLGKETHGHVIRA 177
S S G E F MQ G+ PSLK C+ +L L + + +
Sbjct: 629 SACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYL------EMAYDFIKDM 682
Query: 178 DLNKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAV 236
L D S+ AL+ G + D+ FE+ + ++ + + Y G++E
Sbjct: 683 PLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVD 742
Query: 237 EIFDLMQQEKVK 248
++ L ++ +K
Sbjct: 743 KVRSLARERGLK 754
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 45/362 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC +L+ GR++H K+ Q + + +L+ MY + G A +
Sbjct: 215 RPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARS 271
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F ++ F+ D +WN+MISG Q G
Sbjct: 272 LFDDMP-----------------------------------FR-DMGSWNAMISGLIQNG 295
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
+A + ++M+ G+ + V S+L C L + H +VI+ L D ++
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN 355
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI+MY K G AR+ F Q I D WN++I+ Y +N + +A F MQ
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFIT--DVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
+P+ + V++ S + + + + L +VD+ + G LD A
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473
Query: 308 ELIRELPEPTVSVYHSLL-GACWCHLNSDLGE--EMAMKLQEMEPENPTPFVILSNIYAG 364
++ +P V +++L+ G L S+ E +M + +E+ P T IL YA
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILP-AYAH 532
Query: 365 LG 366
+G
Sbjct: 533 VG 534
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 121/300 (40%), Gaps = 43/300 (14%)
Query: 29 FGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGM 88
F + +H L + K I T LV++Y G + + F ++
Sbjct: 134 FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP--------------- 178
Query: 89 MLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMV-PS 147
+ D WNSMIS + G EA F ++ + P
Sbjct: 179 ---------------------QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPD 217
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
VL AC L G++ H + + +A +LI MY + G AR FD
Sbjct: 218 FYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFD 274
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
+ D WNAMISG +NG A+++ D M+ E +K N + V++L C G +
Sbjct: 275 DMPFR--DMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDI 332
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
A+ I + GL+ ++++ + G L++AR+ +++ V ++S++ A
Sbjct: 333 STAMLIHLYVIKH-GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAA 391
>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
Length = 648
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 203/386 (52%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
+P+ TF S++ AC+ L + G QVH S+ ++ ALVDMY+KC LP A
Sbjct: 160 QPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVA 219
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF+ L+ +N++ W +++ G +Q
Sbjct: 220 MQVFERLE-RKNVIQ-----------------------------------WTAVVVGHAQ 243
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA +LF + +G P ++SV+ AD + ++ G++ H + I+ D S
Sbjct: 244 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSA 303
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+++ MY+KCG P A R F E++ + W M++G G++G AV +F+ M+
Sbjct: 304 GNSIVDMYLKCGLPDEAERMFR--EMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 361
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+P+ +++A+LSAC HAG VD+ + F+ + D ++PK EH+ CMVDLLGR+G L E
Sbjct: 362 GVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELRE 421
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR+LIR +P EPTV V+ +LL AC H + +G E L M+ +NP +V LSN+ A
Sbjct: 422 ARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAE 481
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G W + ++R + R L K G S
Sbjct: 482 AGEWRECHKVRDAMRRRGLKKQGGCS 507
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 156/374 (41%), Gaps = 49/374 (13%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ PN T + + AC + G +HGL ++ Q ++ ++LV +Y K G
Sbjct: 49 MRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGG 108
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEG-FKPDPATWNS 118
+ A VF I TWN M++G G A+ +F E HEG +PD T+ S
Sbjct: 109 RIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFAS 168
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++ S LG E ++ M ++G + +
Sbjct: 169 LLKACSGLGATREGAQVHAAMTASGFSTASNAI--------------------------- 201
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+A AL+ MY+KC + A + F++ E K + W A++ G+ + G+ A+E+
Sbjct: 202 ------LAGALVDMYVKCRRLPVAMQVFERLERK--NVIQWTAVVVGHAQEGQVTEALEL 253
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLL 297
F + +P+S +V+ V++ Q+ + D G + +VD+
Sbjct: 254 FRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGN--SIVDMY 311
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENP 352
+ G DEA + RE+ P V + +++ H LG E +EM EP+
Sbjct: 312 LKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKH---GLGREAVALFEEMRAGGVEPDEV 368
Query: 353 TPFVILSNI-YAGL 365
T +LS +AGL
Sbjct: 369 TYLALLSACSHAGL 382
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 112/267 (41%), Gaps = 39/267 (14%)
Query: 55 MYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPA 114
MY+KCG L A VF ++ RN+++W ++ G + +G + + L
Sbjct: 1 MYVKCGELDLACEVFGGMR-DRNVVSWTALMVGFLRHGDATGCLRL-------------- 45
Query: 115 TWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHV 174
L E ++ P+ +++ L AC + G HG
Sbjct: 46 --------------------LGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLC 85
Query: 175 IRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYES 234
+RA + + +A++L+ +Y K G+ ARR FD + A WNAM+SGY G
Sbjct: 86 VRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGS-GIATWNAMVSGYAHAGHGRD 144
Query: 235 AVEIFDLMQQE--KVKPNSASFVAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHFG 291
A+ +F M++ + +P+ +F ++L AC G + Q+ M F G
Sbjct: 145 ALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAG 204
Query: 292 CMVDLLGRSGRLDEARELIRELPEPTV 318
+VD+ + RL A ++ L V
Sbjct: 205 ALVDMYVKCRRLPVAMQVFERLERKNV 231
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 210/385 (54%), Gaps = 7/385 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ + S +SACA+L L FG+Q+HG ++ + +G AL+ MY K G + A
Sbjct: 237 KPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARR 296
Query: 68 VFQELKGSR-NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQL 126
+ ++ S +++ + ++ G + G A ++F L PD W +MI G+ Q
Sbjct: 297 IIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLK----DPDVVAWTAMIVGYVQN 352
Query: 127 GMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
G+ +A ++F+ M S G P+ + ++LSA + +++L GK+ H IR+ S+
Sbjct: 353 GLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVG 412
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
AL +MY K G + AR+ F+ + D W +MI ++G E A+E+F+ M
Sbjct: 413 NALTTMYAKAGSINGARKVFNLLR-QNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG 471
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+KP+ ++V VLSAC H G V++ F +M + + P H+ CMVDL GR+G L EA
Sbjct: 472 IKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEA 531
Query: 307 RELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGL 365
+ + +P EP V + SLL +C + N DL + A +L +EP N + L+N+Y+
Sbjct: 532 YKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSC 591
Query: 366 GRWEDVGRIRQMINDRQLTKLPGIS 390
G+W+D +IR+++ R + K G+S
Sbjct: 592 GKWDDAAKIRKLMKARGVKKEQGLS 616
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 182/390 (46%), Gaps = 49/390 (12%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P T +V+++CA+ G++VH +K+ + + +L++MY K G L A V
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F +K RN +WN MI+ M GR + A+ FE L+ D +WNSMI+G +Q G
Sbjct: 165 FDRMK-LRNTSSWNAMISLHMNCGRVDLALAQFELLSER----DIVSWNSMIAGCNQHGF 219
Query: 129 RFEAFKLFEK-MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA + F ++ T + P + S LSACA+L L GK+ HG+++R + ++
Sbjct: 220 DNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN 279
Query: 188 ALISMYMKCGQPSWARRFFDQFEI-------------------------------KPDDP 216
ALISMY K G ARR +Q I K D
Sbjct: 280 ALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDV 339
Query: 217 AFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF-T 275
W AMI GY +NG A+E+F M E +PNS + A+LSA ++ QI +
Sbjct: 340 VAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHAS 399
Query: 276 MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSV-YHSLLGACWCHLNS 334
+ L P + + + ++G ++ AR++ L + +V + S++ A H
Sbjct: 400 AIRSGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQH--- 454
Query: 335 DLGEEMAMKLQEM-----EPENPTPFVILS 359
LGEE ++M +P++ T +LS
Sbjct: 455 GLGEEAIELFEQMLTLGIKPDHITYVGVLS 484
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 173/336 (51%), Gaps = 27/336 (8%)
Query: 52 LVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKP 111
L+++Y K G AH++F E+ + +WNT+++G G+ EKA ++F+ +
Sbjct: 16 LMNLYAKTGFHLDAHDLFNEMP-VKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVR---- 70
Query: 112 DPATWNSMISGFSQLGMRFE-AFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKET 170
D +W ++I G++Q+G RFE A K+F M ++P+ +T+VL++CA + +GK+
Sbjct: 71 DSVSWTTIIVGYNQMG-RFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKV 129
Query: 171 HGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNG 230
H V++ L+ +A +L++MY K G A+ FD+ +++ + + WNAMIS + G
Sbjct: 130 HSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLR--NTSSWNAMISLHMNCG 187
Query: 231 EYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHF 290
+ A+ F+L+ + + S+ ++++ C G ++ALQ F+ + D LKP +
Sbjct: 188 RVDLALAQFELLSERDI----VSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSL 243
Query: 291 GCMVDLLGRSGRLDEARE----LIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQE 346
+ +L ++ ++R + + + +V ++L+ G E+A ++ E
Sbjct: 244 ASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISM----YAKSGGVEIARRIIE 299
Query: 347 ---MEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
+ + F L N Y LG D+ RQ+ N
Sbjct: 300 QSGISDLDVIAFTALLNGYVKLG---DITPARQIFN 332
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 16/281 (5%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
PNS T +++SA +S+ L G+Q+H ++ + +G AL MY K G + A
Sbjct: 371 RPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARK 430
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L+ +R+ ++W +MI + +G E+A+ELFE + G KPD T+ ++S + G
Sbjct: 431 VFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGG 490
Query: 128 MRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADLNKDE 183
+ + F+ M++ + P+L C+ + L +E + V + D
Sbjct: 491 LVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAG------LLQEAYKFVENMPMEPDV 544
Query: 184 SMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLM 242
+L+S A+ ++ I+P++ ++A+ + Y G+++ A +I LM
Sbjct: 545 IAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLM 604
Query: 243 QQEKVKPNSASFVAVLSACGHAGHVDKAL-----QIFTMMD 278
+ VK + H V+ L +I+ MMD
Sbjct: 605 KARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMD 645
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/350 (35%), Positives = 200/350 (57%), Gaps = 8/350 (2%)
Query: 43 QSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFE 102
+ D + ++ Y+ G + A VF ++ R++++WNTMI G +NG + A E+F
Sbjct: 103 RRDVFLCNVMLAAYVTRGEVAEARRVFDGMR-ERDMVSWNTMIHGYAVNGEVDLAREVFN 161
Query: 103 GLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLS 162
G+ D +W+SM+S +++ +A +L+ +M++ + P + SVLSAC+D+
Sbjct: 162 GMDDR----DAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMG 217
Query: 163 ALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAM 222
AL +G E H V + D + TALI MY KCG + R F +K D W++M
Sbjct: 218 ALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVK--DVLTWSSM 275
Query: 223 ISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFG 282
I G +G A+ +F M E ++PN +F+ VL +C H G V + F+ M G
Sbjct: 276 IIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHG 335
Query: 283 LKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMA 341
+ PK +H+GCMVDLLGRSG ++EA++LIR++P EP ++ +LLGAC + N ++ EE
Sbjct: 336 VTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIYKNVEVAEEAM 395
Query: 342 MKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
KL+ ++P +V+LSNIYA WE V +R+ + ++ ++PG S+
Sbjct: 396 AKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIPGRSS 445
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P+ T +SV+SAC+ + L G +VH + D +GTAL+DMY KCG + + V
Sbjct: 201 PDCTTMVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRV 260
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
F + +++LTW++MI G+ +G A+ LF + EG +P+ T+ ++ + LG+
Sbjct: 261 FHSMP-VKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGL 319
Query: 129 RFEAFKLFEKMQST-GMVPSLK---CVTSVL 155
+ K F M G+ P ++ C+ +L
Sbjct: 320 VSDGKKYFSSMSVVHGVTPKVQHYGCMVDLL 350
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 187 TALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEK 246
TAL+ Y K G+ AR FD E D N M++ Y GE A +FD M++
Sbjct: 79 TALVEAYAKAGRADLARAAFD--EAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERD 136
Query: 247 VKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEA 306
+ S+ ++ G VD A ++F MDD + M+ + R +A
Sbjct: 137 M----VSWNTMIHGYAVNGEVDLAREVFNGMDDRDAFS-----WSSMMSAYTKGRRSKDA 187
Query: 307 RELIRELP----EPTVSVYHSLLGACWCHLNSDLG 337
EL RE+ P + S+L AC SD+G
Sbjct: 188 LELWREMRAACVNPDCTTMVSVLSAC-----SDMG 217
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 224/387 (57%), Gaps = 8/387 (2%)
Query: 6 SDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCA 65
S +P +T+ SV A ASL + GRQ+HG +K + D+ I ++ MY+ CGCL A
Sbjct: 121 SVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEA 180
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
+F + G +++ WN++I G+ G ++A +LF+ + + +WNSMISGF +
Sbjct: 181 WRLFVGMMGF-DVVAWNSIIMGLAKCGLIDQAQKLFDEMPQR----NGVSWNSMISGFVR 235
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G +A ++F +MQ + P + S+L+ACA L A + G+ H +++R + +
Sbjct: 236 NGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIV 295
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
TALI MY KCG + F+ K + WN+MI G NG E A+++F +++
Sbjct: 296 ITALIDMYCKCGCFEEGLKVFECAPTK--QLSCWNSMILGLANNGCEERAMDLFLELERT 353
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
++P+S SF+ VL+AC H+G V KA + F +M + + ++P +H+ CMV++LG +G LDE
Sbjct: 354 GLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDE 413
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
A LI+++P E ++ SLL AC + N ++ + A L+ ++P+ +V++SN YA
Sbjct: 414 AEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAANCLKNLDPDETCGYVLMSNAYAS 473
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGISA 391
G +E+ R ++ +RQ+ K G S+
Sbjct: 474 YGLFEEAVEQRLLMKERQMEKEVGCSS 500
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 31 RQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN----VFQELKGSRNILTWNTMIA 86
+Q+H +K SDT+ + ++ C P N VF + +N WNT+I
Sbjct: 42 KQIHANLIKTGLISDTVAASRVLAF---CCASPSDRNYAYLVFTRIN-HKNPFVWNTIIR 97
Query: 87 GMMLNGRSEKAMELFEGL--AHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGM 144
G + E A+ +F + + KP T+ S+ ++ LG+ + +L ++ G+
Sbjct: 98 GFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASLGLARDGRQLHGRVIKEGL 157
Query: 145 VPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARR 204
++L L ++ D+ S+ L KCG A++
Sbjct: 158 EDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGL----AKCGLIDQAQK 213
Query: 205 FFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHA 264
FD E+ + WN+MISG+ RNG ++ A+E+F MQ+ VKP+ + V++L+AC +
Sbjct: 214 LFD--EMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYL 271
Query: 265 GHVDKALQIFT-MMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHS 323
G ++ I ++ + F L ++D+ + G +E ++ P +S ++S
Sbjct: 272 GASEQGRWIHKYIVRNRFELNSIV--ITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNS 329
Query: 324 LLGACWCHLNSDLGEEMAMKL 344
++ L ++ EE AM L
Sbjct: 330 MILG----LANNGCEERAMDL 346
>gi|242047426|ref|XP_002461459.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
gi|241924836|gb|EER97980.1| hypothetical protein SORBIDRAFT_02g003000 [Sorghum bicolor]
Length = 568
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 200/384 (52%), Gaps = 38/384 (9%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
P++ T+ ++ ACA LL L+ G ++H K + + +LV +Y CG AH V
Sbjct: 116 PDTHTYPPLLQACARLLSLRHGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRV 175
Query: 69 FQELK-GSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
F E+ G RN+++W NSM++GF+ G
Sbjct: 176 FDEIPVGERNLVSW-----------------------------------NSMLNGFAANG 200
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
E +F +M +P V SVL+A A++ AL LG+ H ++ + L ++ +
Sbjct: 201 RPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYLTKVGLVENSHVGN 260
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
ALI +Y KCG ARR F++ + W ++I G NG + A+E+F +M++EK+
Sbjct: 261 ALIDLYAKCGGVEDARRVFEEMGAR-RTVVSWTSLIVGLAVNGFGKEALELFGIMEREKL 319
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
P + V VL AC H G VD F M +++ + P+ EH GCMVDLLGR+G++ EA
Sbjct: 320 VPTEITMVGVLYACSHCGLVDDGFMYFNRMKEEYNIAPRIEHLGCMVDLLGRAGKVKEAY 379
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I +P EP V+ +LLGAC H +LGE +L E++P + +V+LSN+YA +G
Sbjct: 380 DYILTMPLEPNAVVWRTLLGACAMHKKLELGEAAWARLVELDPGHSGDYVLLSNLYAAVG 439
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
RW DV +R+ + + K PG S
Sbjct: 440 RWADVHVLRKTMVKDGVRKNPGRS 463
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 20/261 (7%)
Query: 111 PDPATWNSMI-----SGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALK 165
PDP + N+++ S L + A +L P +L ACA L +L+
Sbjct: 84 PDPFSLNTVLRIAASSSRPSLALALHARRLAP--------PDTHTYPPLLQACARLLSLR 135
Query: 166 LGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISG 225
G+ H + L + +L+ +Y CG A R FD+ + + WN+M++G
Sbjct: 136 HGERIHAEAAKNGLATLVFVKNSLVHLYGACGLFESAHRVFDEIPVGERNLVSWNSMLNG 195
Query: 226 YGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKP 285
+ NG + IF M P+ + V+VL+A G + ++ + GL
Sbjct: 196 FAANGRPNEVLTIFREMLDVNFMPDGFTVVSVLTASAEIGALALGRRVHVYL-TKVGLVE 254
Query: 286 KQEHFGCMVDLLGRSGRLDEARELIREL-PEPTVSVYHSLLGACWCHLNSDLGEEMAMKL 344
++DL + G +++AR + E+ TV + SL+ + G+E
Sbjct: 255 NSHVGNALIDLYAKCGGVEDARRVFEEMGARRTVVSWTSLIVGLAV---NGFGKEALELF 311
Query: 345 QEMEPEN--PTPFVILSNIYA 363
ME E PT ++ +YA
Sbjct: 312 GIMEREKLVPTEITMVGVLYA 332
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 218/417 (52%), Gaps = 42/417 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P+ TF V+ AC L +++ G +HG LK QS+T + L+ + CG L A
Sbjct: 110 RPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARA 169
Query: 68 VFQ---------------------ELKGSR---------NILTWNTMIAGMMLNGRSEKA 97
+F +L +R ++++WN MI +G EKA
Sbjct: 170 LFDASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKA 229
Query: 98 MELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSA 157
+LF+ E K D TWN+MI+G+ + EA ++F+ M+ G P + S+LSA
Sbjct: 230 RKLFD----EVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSA 285
Query: 158 CADLSALKLGKETHGHVIR---ADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPD 214
ADL L++GK+ H + DL+ ++ ALI MY KCG A F ++
Sbjct: 286 SADLGDLEIGKKIHRSIFDMCCGDLS--VLLSNALIDMYAKCGSIGNALEVFQG--MRKK 341
Query: 215 DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIF 274
D + WN++I G +G E ++ +F M + K+KPN +FVAVL AC HAG V + F
Sbjct: 342 DTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYF 401
Query: 275 TMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLN 333
+M + F ++P +H+GCMVD+LGR+G L EA + I + EP ++ +LLGAC H +
Sbjct: 402 NLMKNVFKIEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGD 461
Query: 334 SDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
+LG +L +M + +V+LSNIYA G W+ V ++R++++D + K G S
Sbjct: 462 VELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHS 518
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ L + ++L ++ ++++G + A +LF ++ +PD WN+MI G +Q
Sbjct: 37 IVNGLNSTTSVLRELIFVSAIVVSGTMDYAHQLFAQIS----QPDIFMWNTMIRGSAQTL 92
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
A L+ +M++ G+ P + VL AC LS +KLG HG V+++ + +
Sbjct: 93 KPATAVSLYTQMENRGVRPDKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRN 152
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
LI + CG + AR FD + P W+A+ +GY R G+ + A ++FD M + +
Sbjct: 153 TLIYFHANCGDLATARALFDASAKREVVP--WSALTAGYARRGKLDVARQLFDEMPMKDL 210
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIF 274
S+ +++A G ++KA ++F
Sbjct: 211 ----VSWNVMITAYAKHGEMEKARKLF 233
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 13/250 (5%)
Query: 5 LSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLP 63
L P+ VT +S++SA A L L+ G+++H + ++ AL+DMY KCG +
Sbjct: 270 LGQRPDDVTMLSILSASADLGDLEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIG 329
Query: 64 CAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGF 123
A VFQ ++ ++ +WN++I G+ L+G +E+++ LF+ + KP+ T+ +++
Sbjct: 330 NALEVFQGMR-KKDTSSWNSIIGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVAC 388
Query: 124 SQLGMRFEAFKLFEKMQSTGMV-PSLK---CVTSVLSACADLSALKLGKETHGHVIRADL 179
S G E F M++ + P++K C+ +L L E + ++
Sbjct: 389 SHAGKVREGRMYFNLMKNVFKIEPNIKHYGCMVDILGRAGLLI------EAFDFIDTMEI 442
Query: 180 NKDESMATALISMYMKCGQPSWARRFFDQ-FEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+ + L+ G RR +Q +++ D+ + + + Y GE++ ++
Sbjct: 443 EPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDESGDYVLLSNIYASQGEWDGVQKV 502
Query: 239 FDLMQQEKVK 248
LM VK
Sbjct: 503 RKLMDDGGVK 512
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/384 (33%), Positives = 203/384 (52%), Gaps = 39/384 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ T+ SV+ ACA+L L++G VH +K SD + + +VDMY KCG + A
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQK 550
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+ + G + + +WN+++SGFS
Sbjct: 551 LHDRIGGQQVV------------------------------------SWNAILSGFSLNK 574
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMAT 187
EA K F +M G+ P +VL CA+L+ ++LGK+ HG +I+ ++ DE +++
Sbjct: 575 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 634
Query: 188 ALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKV 247
L+ MY KCG + F++ E + D WNAMI GY +G A+ +F+ MQ+E V
Sbjct: 635 TLVDMYAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGVEALRMFERMQKENV 692
Query: 248 KPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEAR 307
PN A+FVAVL AC H G D + F +M + L+P+ EHF CMVD+LGRS EA
Sbjct: 693 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 752
Query: 308 ELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLG 366
+ I +P + ++ +LL C + ++ E A + ++P++ + +++LSN+YA G
Sbjct: 753 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 812
Query: 367 RWEDVGRIRQMINDRQLTKLPGIS 390
+W DV R R+++ +L K PG S
Sbjct: 813 KWADVSRTRRLLKQGRLKKEPGCS 836
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 160/372 (43%), Gaps = 60/372 (16%)
Query: 10 NSVTFISVISACASLL-YLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNV 68
+ V+ V SACA Y Q G+QVH L +K D + A++D+Y KC L A+ +
Sbjct: 392 DVVSLSGVFSACAETKGYFQ-GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLI 450
Query: 69 FQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGM 128
FQ +K + D +WN++I+ Q G
Sbjct: 451 FQGMK------------------------------------QKDSVSWNAIIAALEQNGH 474
Query: 129 RFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATA 188
+ F +M GM P SVL ACA L +L+ G H VI++ L D +A+
Sbjct: 475 YDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST 534
Query: 189 LISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVK 248
++ MY KCG A++ D+ I WNA++SG+ N E E A + F M +K
Sbjct: 535 VVDMYCKCGIIDEAQKLHDR--IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLK 592
Query: 249 PNSASFVAVLSACGHAGHVDKALQIF------TMMDDDFGLKPKQEHFGCMVDLLGRSGR 302
P+ +F VL C + ++ QI M+DD++ +VD+ + G
Sbjct: 593 PDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISST-------LVDMYAKCGD 645
Query: 303 LDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP----FVIL 358
+ ++ + ++ + +++++ H LG E + M+ EN P FV +
Sbjct: 646 MPDSLLVFEKVEKRDFVSWNAMICGYALH---GLGVEALRMFERMQKENVVPNHATFVAV 702
Query: 359 SNIYAGLGRWED 370
+ +G ++D
Sbjct: 703 LRACSHVGLFDD 714
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 141/324 (43%), Gaps = 20/324 (6%)
Query: 9 PNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQ-------SDTMIGTALVDMYLKCGC 61
P VTF V +CA Q GR+ + + L+ MY +C
Sbjct: 55 PARVTFSRVFQSCA-----QAGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAG 109
Query: 62 LPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMIS 121
CA VF + R+ ++WNTM+ G A+ LF+G+ PD +WN+++S
Sbjct: 110 AACARRVFDAMP-RRDTVSWNTMLTAYSHAGDISTAVALFDGMP----DPDVVSWNALVS 164
Query: 122 GFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNK 181
G+ Q GM E+ LF +M G+ P +L +C+ L L LG + H ++ L
Sbjct: 165 GYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEI 224
Query: 182 DESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
D +AL+ MY KC A FF + + + W A I+G +N +Y +E+F
Sbjct: 225 DVRTGSALVDMYGKCRSLDDALCFF--YGMPERNWVSWGAAIAGCVQNEQYVRGLELFIE 282
Query: 242 MQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSG 301
MQ+ + + S+ + +C ++ Q+ + + +VD+ ++
Sbjct: 283 MQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKN-KFSSDRVVGTAIVDVYAKAN 341
Query: 302 RLDEARELIRELPEPTVSVYHSLL 325
L +AR LP TV ++++
Sbjct: 342 SLTDARRAFFGLPNHTVETSNAMM 365
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 53/299 (17%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P+ TF +V+ CA+L ++ G+Q+HG +K E D I + LVDMY KCG +P +
Sbjct: 592 KPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLL 651
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF++++ R+ ++WN MI G L+G +A+ +FE + E P+ AT+ +++ S +G
Sbjct: 652 VFEKVE-KRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVG 710
Query: 128 MRFEAFKLFEKM---------------------QSTGMVPSLKCVTS------------V 154
+ + + F M +S G ++K + S +
Sbjct: 711 LFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTL 770
Query: 155 LSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWA-----RRFFDQF 209
LS C +++ + +V+ D + D S+ L ++Y + G+ WA RR Q
Sbjct: 771 LSICKIRQDVEIAELAASNVLLLDPD-DSSVYILLSNVYAESGK--WADVSRTRRLLKQG 827
Query: 210 EIKPDDPAFWNAMIS----------GYGRNGE-YESAVEIFDLMQQEKVKPNSASFVAV 257
+K + W + S + R+GE YE ++ M+ +P+SASFV V
Sbjct: 828 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLSGYEPDSASFVEV 886
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 155/348 (44%), Gaps = 41/348 (11%)
Query: 13 TFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQEL 72
++ S +CA++ L GRQ+H +K + SD ++GTA+VD+Y K L
Sbjct: 294 SYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLT--------- 344
Query: 73 KGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEA 132
A F GL + + T N+M+ G + G+ EA
Sbjct: 345 -----------------------DARRAFFGLPNHTVE----TSNAMMVGLVRAGLGIEA 377
Query: 133 FKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISM 192
LF+ M + + + ++ V SACA+ G++ H I++ + D + A++ +
Sbjct: 378 MGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDL 437
Query: 193 YMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSA 252
Y KC A F +K D WNA+I+ +NG Y+ + F+ M + +KP+
Sbjct: 438 YGKCKALMEAYLIFQG--MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 495
Query: 253 SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRE 312
++ +VL AC ++ L + + GL +VD+ + G +DEA++L
Sbjct: 496 TYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAFVASTVVDMYCKCGIIDEAQKLHDR 554
Query: 313 LPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM--EPENPTPFVIL 358
+ V ++++L + S+ ++ ++ +M +P++ T +L
Sbjct: 555 IGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVL 602
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 138 KMQSTGMVPSLKCVTSVLSACA-DLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
+M +G VP T+ +S C + A G V A +D +++ Y
Sbjct: 84 RMVVSGFVP-----TAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHA 138
Query: 197 GQPSWARRFFDQFEIKPD-DPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFV 255
G S A FD PD D WNA++SGY + G ++ +V++F M + V P+ +F
Sbjct: 139 GDISTAVALFDGM---PDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFA 195
Query: 256 AVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPE 315
+L +C + +Q+ + GL+ +VD+ G+ LD+A +PE
Sbjct: 196 VLLKSCSALEELSLGVQVHALAVKT-GLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPE 254
Query: 316 PTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM 347
+ + + C + G E+ +++Q +
Sbjct: 255 RNWVSWGAAIAGCVQNEQYVRGLELFIEMQRL 286
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 203/386 (52%), Gaps = 41/386 (10%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLK--IEKQSDTMIGTALVDMYLKCGCLPCA 65
+P+ TF S++ AC+ L + G QVH S+ ++ ALVDMY+KC LP A
Sbjct: 207 QPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVA 266
Query: 66 HNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQ 125
VF+ L+ +N++ W +++ G +Q
Sbjct: 267 MQVFERLE-RKNVIQ-----------------------------------WTAVVVGHAQ 290
Query: 126 LGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESM 185
G EA +LF + +G P ++SV+ AD + ++ G++ H + I+ D S
Sbjct: 291 EGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSA 350
Query: 186 ATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE 245
+++ MY+KCG P A R F E++ + W M++G G++G AV +F+ M+
Sbjct: 351 GNSIVDMYLKCGLPDEAERMFR--EMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAG 408
Query: 246 KVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDE 305
V+P+ +++A+LSAC HAG VD+ + F+ + D ++PK EH+ CMVDLLGR+G L E
Sbjct: 409 GVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELRE 468
Query: 306 ARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAG 364
AR+LIR +P EPTV V+ +LL AC H + +G E L M+ +NP +V LSN+ A
Sbjct: 469 ARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAE 528
Query: 365 LGRWEDVGRIRQMINDRQLTKLPGIS 390
G W + ++R + R L K G S
Sbjct: 529 AGEWRECHKVRDAMRRRGLKKQGGCS 554
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 17 VISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSR 76
++ A A L+ G Q+HG K+ SDTM+G L+DMY+KCG L A VF ++ R
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMR-DR 68
Query: 77 NILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLF 136
N+++W ++ G + +G + + L L
Sbjct: 69 NVVSWTALMVGFLRHGDATGCLRL----------------------------------LG 94
Query: 137 EKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKC 196
E ++ P+ +++ L AC + G HG +RA + + +A++L+ +Y K
Sbjct: 95 EMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKG 154
Query: 197 GQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQE--KVKPNSASF 254
G+ ARR FD + A WNAM+SGY G A+ +F M++ + +P+ +F
Sbjct: 155 GRIGDARRVFDGAGLGS-GIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTF 213
Query: 255 VAVLSACGHAGHVDKALQIFTMMD-DDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
++L AC G + Q+ M F G +VD+ + RL A ++ L
Sbjct: 214 ASLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERL 273
Query: 314 PEPTV 318
V
Sbjct: 274 ERKNV 278
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 156/374 (41%), Gaps = 49/374 (13%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M+ PN T + + AC + G +HGL ++ Q ++ ++LV +Y K G
Sbjct: 96 MRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKGG 155
Query: 61 CLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELF-EGLAHEG-FKPDPATWNS 118
+ A VF I TWN M++G G A+ +F E HEG +PD T+ S
Sbjct: 156 RIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFAS 215
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
++ S LG E ++ M ++G + +
Sbjct: 216 LLKACSGLGATREGAQVHAAMTASGFSTASNAI--------------------------- 248
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
+A AL+ MY+KC + A + F++ E K + W A++ G+ + G+ A+E+
Sbjct: 249 ------LAGALVDMYVKCRRLPVAMQVFERLERK--NVIQWTAVVVGHAQEGQVTEALEL 300
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTM-MDDDFGLKPKQEHFGCMVDLL 297
F + +P+S +V+ V++ Q+ + D G + +VD+
Sbjct: 301 FRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGN--SIVDMY 358
Query: 298 GRSGRLDEARELIRELPEPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEM-----EPENP 352
+ G DEA + RE+ P V + +++ H LG E +EM EP+
Sbjct: 359 LKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKH---GLGREAVALFEEMRAGGVEPDEV 415
Query: 353 TPFVILSNI-YAGL 365
T +LS +AGL
Sbjct: 416 TYLALLSACSHAGL 429
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 149 KCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQ 208
K + +L A A S+L+ G + HG + + D + LI MY+KCG+ A F
Sbjct: 5 KMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGG 64
Query: 209 FEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQ-EKVKPNSASFVAVLSACGHAGHV 267
++ + W A++ G+ R+G+ + + M+ + PN + A L AC G
Sbjct: 65 --MRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDT 122
Query: 268 DKALQIFTMMDDDFGLKPKQEH---FGCMVDLLGRSGRLDEARELI 310
+ I + QEH +V + + GR+ +AR +
Sbjct: 123 AAGVGIHGLCVR----AGYQEHDVVASSLVLVYSKGGRIGDARRVF 164
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 211/393 (53%), Gaps = 9/393 (2%)
Query: 1 MKECLSDEPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCG 60
M + S +P+ T SV+SACA+ L+ G+Q+H ++ + +G AL+ MY K G
Sbjct: 268 MLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSG 327
Query: 61 CLPCAHNVFQELKG--SRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNS 118
+ AH + E+ G S N++ + +++ G G + A +F+ L H D W +
Sbjct: 328 AVEVAHRIV-EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHR----DVVAWTA 382
Query: 119 MISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRAD 178
MI G++Q G+ +A LF M G P+ + +VLS + L++L GK+ H IR +
Sbjct: 383 MIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLE 442
Query: 179 LNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEI 238
S+ ALI+MY + G AR+ F+ D W +MI ++G A+E+
Sbjct: 443 EVSSVSVGNALITMYSRSGSIKDARKIFNHI-CSYRDTLTWTSMILSLAQHGLGNEAIEL 501
Query: 239 FDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLG 298
F+ M + +KP+ ++V VLSAC H G V++ F +M + ++P H+ CM+DLLG
Sbjct: 502 FEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLG 561
Query: 299 RSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTPFVI 357
R+G L+EA IR +P EP V + SLL +C H DL + A KL ++P N ++
Sbjct: 562 RAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLA 621
Query: 358 LSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS 390
L+N + G+WED ++R+ + D+ + K G S
Sbjct: 622 LANTLSACGKWEDAAKVRKSMKDKAVKKEQGFS 654
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 167/341 (48%), Gaps = 44/341 (12%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
P TF +V+++CA+ L G++VH +K+ + + +L++MY KCG A
Sbjct: 142 SPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKV 201
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF ++ ++ TWNTMI+ M + + A+ LF+ + PD +WNS+I+G+ G
Sbjct: 202 VFDRMR-LKDTSTWNTMISMHMQFCQFDLALALFDQMT----DPDIVSWNSIITGYCHQG 256
Query: 128 MRFEAFKLFEKM-QSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMA 186
A + F M +S+ + P + SVLSACA+ +LKLGK+ H H++RAD++ ++
Sbjct: 257 YDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVG 316
Query: 187 TALISMYMKCGQPSWARRFFD------------------QFEIKPDDPA----------- 217
ALISMY K G A R + F+I DPA
Sbjct: 317 NALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD 376
Query: 218 --FWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFT 275
W AMI GY +NG A+ +F LM +E KPN+ + AVLS +D Q+
Sbjct: 377 VVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHA 436
Query: 276 M---MDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIREL 313
+ +++ + ++ + RSG + +AR++ +
Sbjct: 437 VAIRLEEVSSVSVGN----ALITMYSRSGSIKDARKIFNHI 473
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 169/352 (48%), Gaps = 12/352 (3%)
Query: 29 FGRQVHGLTLKIE-KQSDTMIGTALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAG 87
GR +H +K + + L+++Y+K G AH +F E+ + +WNT+++
Sbjct: 30 IGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMP-LKTTFSWNTILSA 88
Query: 88 MMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPS 147
G + A +F+ + +PD +W +MI G++ LG+ A F +M S+G+ P+
Sbjct: 89 HAKAGNLDSARRVFDEIP----QPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPT 144
Query: 148 LKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQPSWARRFFD 207
T+VL++CA AL +GK+ H V++ + +A +L++MY KCG A+ FD
Sbjct: 145 QFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFD 204
Query: 208 QFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHV 267
+ +K D + WN MIS + + +++ A+ +FD M P+ S+ ++++ H G+
Sbjct: 205 RMRLK--DTSTWNTMISMHMQFCQFDLALALFDQMTD----PDIVSWNSIITGYCHQGYD 258
Query: 268 DKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTVSVYHSLLGA 327
+AL+ F+ M LKP + G ++ L +++ + V + ++ A
Sbjct: 259 IRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNA 318
Query: 328 CWCHLNSDLGEEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMIN 379
E+A ++ E+ + +++ G + D+ R + +
Sbjct: 319 LISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFD 370
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 137/294 (46%), Gaps = 27/294 (9%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+PN+ T +V+S +SL L G+Q+H + +++E+ S +G AL+ MY + G + A
Sbjct: 409 KPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARK 468
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
+F + R+ LTW +MI + +G +A+ELFE + KPD T+ ++S + +G
Sbjct: 469 IFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVG 528
Query: 128 MRFEAFKLFEKMQSTGMVPSLKCVTSVLSACAD-LSALKLGKETHGHVIRADLNKDESMA 186
+ + F M++ V +++ +S + D L L +E + + + D
Sbjct: 529 LVEQGKSYFNLMKN---VHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAW 585
Query: 187 TALIS-----MYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDL 241
+L+S Y+ + + + I P++ + A+ + G++E A ++
Sbjct: 586 GSLLSSCRVHKYVDLAKVAAEKLLL----IDPNNSGAYLALANTLSACGKWEDAAKVRKS 641
Query: 242 MQQEKVKPNSA-SFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMV 294
M+ + VK S+V + + IF + D L P+++ CM+
Sbjct: 642 MKDKAVKKEQGFSWV----------QIKNKVHIFGVED---ALHPQRDAIYCMI 682
>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 577
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 197/343 (57%), Gaps = 7/343 (2%)
Query: 50 TALVDMYLKCGCLPCAHNVFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGF 109
+++ Y K G + A +F + +++++WN +I G + + A ELF + G
Sbjct: 111 NSMITCYCKLGDINSARLMF-DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLM---GS 166
Query: 110 KPDPATWNSMISGFSQLGMRFEAFKLFEKMQSTGMVPSLKCVTSVLSACADLSALKLGKE 169
+ TWN+MIS + Q G A +F++MQS + P+ + S+LSACA L AL +G+
Sbjct: 167 ARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEW 226
Query: 170 THGHVIRADLNKDESMATALISMYMKCGQPSWARRFFDQFEIKPDDPAFWNAMISGYGRN 229
HG++ L D + ALI MY KCG A F K + WN++I G G N
Sbjct: 227 IHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRK--NIFCWNSIIVGLGMN 284
Query: 230 GEYESAVEIFDLMQQEKVKPNSASFVAVLSACGHAGHVDKALQIFTMMDDDFGLKPKQEH 289
G E A+ F +M++E +KP+ +FV +LS C H+G + + F+ M +GL+P EH
Sbjct: 285 GRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEH 344
Query: 290 FGCMVDLLGRSGRLDEARELIRELP-EPTVSVYHSLLGACWCHLNSDLGEEMAMKLQEME 348
+GCMVDLLGR+G L EA ELIR +P +P V SLL AC H ++ LGE++ +L E++
Sbjct: 345 YGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELD 404
Query: 349 PENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGISA 391
P + +V LSN+YA L RW+DV R+++ R + K PG S+
Sbjct: 405 PCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSS 447
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Query: 8 EPNSVTFISVISACASLLYLQFGRQVHGLTLKIEKQSDTMIGTALVDMYLKCGCLPCAHN 67
+P VT +S++SACA L L G +HG + D ++G AL+DMY KCG L A +
Sbjct: 202 KPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAID 261
Query: 68 VFQELKGSRNILTWNTMIAGMMLNGRSEKAMELFEGLAHEGFKPDPATWNSMISGFSQLG 127
VF L +NI WN++I G+ +NGR E+A+ F + EG KPD T+ ++SG S G
Sbjct: 262 VFHGLS-RKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSG 320
Query: 128 MRFEAFKLFEKMQST-GMVPSLK 149
+ + F +M G+ P ++
Sbjct: 321 LLSAGQRYFSEMLGVYGLEPGVE 343
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 13/216 (6%)
Query: 139 MQSTGMVPSLKCVTSVLSACADLSALKLGKETHGHVIRADLNKDESMATALISMYMKCGQ 198
M ++PS + +L +CA +LG+ H +++ D + T L+ Y K G
Sbjct: 1 MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60
Query: 199 PSWARRFFDQFEIKPDDPAFWNAMISGYGRNGEYESAVEIFDLMQQEKVKPNSASFVAVL 258
A+R F + D NAMIS ++G E A +FD M + NS S+ +++
Sbjct: 61 LKCAKRVF--MGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMI 114
Query: 259 SACGHAGHVDKALQIFTMMDDDFGLKPKQEHFGCMVDLLGRSGRLDEARELIRELPEPTV 318
+ G ++ A +F D + ++D +S +L A+EL +
Sbjct: 115 TCYCKLGDINSARLMF-----DCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARN 169
Query: 319 SVYHSLLGACWCHLNSDLGEEMAMKLQEMEPENPTP 354
SV + + + + + G ++M Q+M+ EN P
Sbjct: 170 SVTWNTMISAYVQC-GEFGTAISM-FQQMQSENVKP 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,093,743,838
Number of Sequences: 23463169
Number of extensions: 247524760
Number of successful extensions: 738712
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10494
Number of HSP's successfully gapped in prelim test: 1659
Number of HSP's that attempted gapping in prelim test: 552661
Number of HSP's gapped (non-prelim): 65248
length of query: 394
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 250
effective length of database: 8,980,499,031
effective search space: 2245124757750
effective search space used: 2245124757750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)