Query 016129
Match_columns 394
No_of_seqs 362 out of 2427
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 08:22:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q8k_A Proliferation-associate 100.0 6.2E-89 2.1E-93 683.3 32.9 362 8-371 14-384 (401)
2 2nw5_A Methionine aminopeptida 100.0 3.8E-74 1.3E-78 567.2 28.1 303 12-333 40-358 (360)
3 1xgs_A Methionine aminopeptida 100.0 1.5E-71 5.3E-76 536.9 29.0 289 17-330 1-294 (295)
4 3fm3_A Methionine aminopeptida 100.0 1.1E-71 3.9E-76 550.8 28.2 306 8-332 34-355 (358)
5 1b6a_A Methionine aminopeptida 100.0 6.3E-71 2.1E-75 559.1 29.8 309 7-333 154-476 (478)
6 4b6a_t Probable metalloproteas 100.0 1.4E-68 4.8E-73 545.1 30.4 315 10-331 37-483 (614)
7 3tb5_A Methionine aminopeptida 100.0 3.8E-54 1.3E-58 409.5 27.7 252 10-336 1-252 (264)
8 3mx6_A Methionine aminopeptida 100.0 8.6E-53 2.9E-57 399.8 27.9 254 9-337 4-258 (262)
9 1o0x_A Methionine aminopeptida 100.0 8.2E-52 2.8E-56 393.1 26.6 249 8-332 11-261 (262)
10 4fuk_A Methionine aminopeptida 100.0 1.3E-51 4.6E-56 404.9 28.2 248 10-334 60-309 (337)
11 2gg2_A Methionine aminopeptida 100.0 1.7E-51 5.9E-56 390.9 26.1 253 10-336 1-254 (263)
12 1qxy_A Methionyl aminopeptidas 100.0 4E-51 1.4E-55 385.9 27.3 246 13-334 3-250 (252)
13 3tav_A Methionine aminopeptida 100.0 4E-50 1.4E-54 386.1 27.3 248 9-333 28-286 (286)
14 3s6b_A Methionine aminopeptida 100.0 1.2E-49 4.1E-54 392.4 28.5 248 10-334 100-352 (368)
15 3pka_A Methionine aminopeptida 100.0 1.8E-49 6E-54 381.4 28.0 246 9-331 37-284 (285)
16 2b3h_A Methionine aminopeptida 100.0 2.5E-49 8.7E-54 386.7 27.6 246 9-332 71-319 (329)
17 3q6d_A Proline dipeptidase; st 100.0 1.7E-44 6E-49 356.9 26.3 196 8-227 125-323 (356)
18 2zsg_A Aminopeptidase P, putat 100.0 4.2E-44 1.4E-48 354.3 26.3 196 8-227 128-326 (359)
19 1wy2_A XAA-Pro dipeptidase; st 100.0 1.4E-43 4.9E-48 349.9 27.2 196 8-227 122-320 (351)
20 4ege_A Dipeptidase PEPE; struc 100.0 1.5E-43 5.2E-48 352.9 27.0 227 8-337 145-374 (378)
21 1wn1_A Dipeptidase; prolidase, 100.0 1.1E-43 3.7E-48 351.4 25.3 195 8-227 126-323 (356)
22 4fkc_A XAA-Pro aminopeptidase; 100.0 3.3E-43 1.1E-47 350.3 24.8 228 8-337 145-375 (377)
23 3ig4_A XAA-Pro aminopeptidase; 100.0 5.9E-42 2E-46 345.8 26.1 193 8-227 166-373 (427)
24 1kp0_A Creatine amidinohydrola 100.0 1.4E-41 5E-46 341.0 26.3 209 8-229 152-363 (402)
25 2v3z_A XAA-Pro aminopeptidase; 100.0 3.3E-41 1.1E-45 342.5 28.2 244 8-354 170-436 (440)
26 3cb6_A FACT complex subunit SP 100.0 1.4E-41 4.9E-46 345.3 22.3 250 8-345 172-443 (444)
27 3rva_A Organophosphorus acid a 100.0 1.5E-41 5.2E-46 344.8 21.7 207 8-229 154-390 (451)
28 1chm_A Creatine amidinohydrola 100.0 1.4E-40 4.6E-45 334.2 26.7 207 8-229 152-363 (401)
29 3biq_A FACT complex subunit SP 100.0 6.2E-41 2.1E-45 342.9 22.8 253 8-347 172-453 (467)
30 4b28_A Metallopeptidase, famil 100.0 2E-41 6.7E-46 345.7 18.6 231 8-334 224-462 (470)
31 2iw2_A XAA-Pro dipeptidase; me 100.0 5.3E-40 1.8E-44 337.9 27.9 209 8-228 182-418 (494)
32 3l24_A XAA-Pro dipeptidase; PI 100.0 1.1E-40 3.9E-45 341.9 20.9 204 8-229 154-387 (517)
33 3ctz_A XAA-Pro aminopeptidase 100.0 1.1E-38 3.9E-43 336.0 21.8 249 8-353 316-586 (623)
34 3mx6_A Methionine aminopeptida 96.3 0.019 6.5E-07 53.3 10.4 86 21-115 122-210 (262)
35 3pka_A Methionine aminopeptida 95.7 0.046 1.6E-06 51.4 9.7 101 21-129 155-275 (285)
36 3q6d_A Proline dipeptidase; st 95.6 0.072 2.5E-06 51.5 11.3 100 21-129 239-339 (356)
37 2gg2_A Methionine aminopeptida 95.5 0.075 2.6E-06 49.1 10.5 100 21-129 120-240 (263)
38 3tb5_A Methionine aminopeptida 95.5 0.054 1.9E-06 50.1 9.3 103 21-129 118-238 (264)
39 3fm3_A Methionine aminopeptida 95.4 0.039 1.3E-06 53.7 8.3 88 136-228 47-135 (358)
40 1o0x_A Methionine aminopeptida 95.3 0.077 2.6E-06 49.1 9.9 101 21-129 131-251 (262)
41 1qxy_A Methionyl aminopeptidas 95.3 0.084 2.9E-06 48.4 10.1 101 21-129 118-239 (252)
42 3cb6_A FACT complex subunit SP 95.3 0.2 6.8E-06 49.8 13.5 101 21-130 307-421 (444)
43 1wy2_A XAA-Pro dipeptidase; st 95.3 0.11 3.7E-06 50.2 11.1 99 21-129 236-336 (351)
44 2zsg_A Aminopeptidase P, putat 95.1 0.13 4.3E-06 49.7 11.0 99 21-129 242-342 (359)
45 4ege_A Dipeptidase PEPE; struc 95.1 0.13 4.5E-06 50.2 11.0 97 21-129 259-359 (378)
46 1wn1_A Dipeptidase; prolidase, 95.0 0.11 3.9E-06 50.2 10.5 99 21-129 239-339 (356)
47 3tav_A Methionine aminopeptida 95.0 0.14 4.6E-06 48.1 10.5 101 21-129 149-275 (286)
48 3s6b_A Methionine aminopeptida 94.5 0.15 5.1E-06 49.7 9.6 101 21-129 220-340 (368)
49 2b3h_A Methionine aminopeptida 94.4 0.17 5.8E-06 48.6 9.7 101 21-129 189-309 (329)
50 3biq_A FACT complex subunit SP 94.4 0.45 1.5E-05 47.6 13.3 100 21-129 314-425 (467)
51 4fkc_A XAA-Pro aminopeptidase; 94.4 0.19 6.4E-06 48.9 10.2 99 21-129 260-360 (377)
52 2v3z_A XAA-Pro aminopeptidase; 94.0 0.37 1.3E-05 48.0 11.6 103 21-129 285-412 (440)
53 4fuk_A Methionine aminopeptida 93.6 0.27 9.3E-06 47.2 9.6 87 136-228 71-158 (337)
54 3ig4_A XAA-Pro aminopeptidase; 93.4 0.64 2.2E-05 46.2 12.0 105 21-129 281-390 (427)
55 1kp0_A Creatine amidinohydrola 92.7 0.94 3.2E-05 44.2 12.0 102 21-129 272-381 (402)
56 1xgs_A Methionine aminopeptida 92.7 0.45 1.5E-05 44.8 9.3 82 136-228 5-87 (295)
57 1b6a_A Methionine aminopeptida 92.6 0.32 1.1E-05 49.0 8.6 86 21-115 272-369 (478)
58 2nw5_A Methionine aminopeptida 92.5 0.51 1.7E-05 45.9 9.6 84 136-227 49-136 (360)
59 2q8k_A Proliferation-associate 91.5 0.58 2E-05 46.1 8.9 92 21-115 145-239 (401)
60 1chm_A Creatine amidinohydrola 91.1 1.6 5.6E-05 42.6 11.8 102 21-129 272-381 (401)
61 3rva_A Organophosphorus acid a 90.1 2 7E-05 42.8 11.5 38 21-58 270-307 (451)
62 4b28_A Metallopeptidase, famil 88.2 0.74 2.5E-05 46.3 6.7 102 21-129 345-450 (470)
63 2iw2_A XAA-Pro dipeptidase; me 87.9 3.3 0.00011 41.7 11.4 39 21-59 302-340 (494)
64 3l24_A XAA-Pro dipeptidase; PI 85.0 4.8 0.00017 40.8 10.7 38 21-58 267-304 (517)
65 3ctz_A XAA-Pro aminopeptidase 80.7 2.5 8.4E-05 44.0 6.7 97 21-129 439-543 (623)
66 4b6a_t Probable metalloproteas 58.7 88 0.003 32.2 12.0 41 135-175 47-96 (614)
67 1g6p_A Cold shock protein TMCS 46.2 40 0.0014 23.8 5.3 47 74-120 12-59 (66)
68 1xee_A Chemotaxis-inhibiting p 36.9 17 0.00059 26.1 2.0 24 311-334 25-50 (91)
69 3i2z_B RNA chaperone, negative 32.1 36 0.0012 24.4 3.2 47 74-120 17-65 (71)
70 3cam_A Cold-shock domain famil 31.1 28 0.00094 24.8 2.3 46 74-119 13-60 (67)
71 3a0j_A Cold shock protein; OB- 31.1 48 0.0016 23.9 3.7 47 74-120 13-62 (73)
72 2dae_A KIAA0733 protein; mitog 26.4 38 0.0013 24.6 2.3 17 261-277 12-28 (75)
73 2ytx_A Cold shock domain-conta 26.3 43 0.0015 25.7 2.9 47 74-120 28-75 (97)
74 2y78_A Peptidyl-prolyl CIS-tra 25.9 43 0.0015 27.0 3.0 51 98-159 40-97 (133)
75 3l9k_W Dynein intermediate cha 25.7 1.3E+02 0.0044 19.0 4.4 30 6-35 3-32 (38)
76 3pr9_A FKBP-type peptidyl-prol 25.4 1E+02 0.0035 25.6 5.4 50 101-161 2-70 (157)
77 2k5n_A Putative cold-shock pro 25.4 51 0.0017 23.9 2.9 46 74-120 14-59 (74)
78 2kcm_A Cold shock domain famil 25.0 35 0.0012 24.9 2.0 45 74-118 12-58 (74)
79 1hxv_A Trigger factor; FKBP fo 25.0 75 0.0026 24.8 4.2 51 98-159 27-81 (113)
80 2vn1_A 70 kDa peptidylprolyl i 24.6 49 0.0017 26.2 3.1 53 98-161 31-91 (129)
81 4dip_A Peptidyl-prolyl CIS-tra 24.6 71 0.0024 25.1 4.0 52 98-160 26-87 (125)
82 1wfq_A UNR protein; beta-barre 23.1 48 0.0016 25.0 2.5 47 74-120 28-77 (89)
83 4g2e_A Peroxiredoxin; redox pr 22.1 43 0.0015 27.3 2.3 37 314-353 118-154 (157)
84 1c9o_A CSPB, cold-shock protei 21.4 41 0.0014 23.7 1.7 47 74-120 13-60 (66)
85 1x65_A UNR protein; cell-free 21.1 43 0.0015 25.3 1.9 40 74-114 18-58 (89)
86 3cgm_A SLYD, peptidyl-prolyl C 20.5 2.2E+02 0.0074 23.6 6.4 49 101-160 3-52 (158)
No 1
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=100.00 E-value=6.2e-89 Score=683.31 Aligned_cols=362 Identities=52% Similarity=0.838 Sum_probs=316.5
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCc
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNT 87 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~ 87 (394)
+++|.|||++||++||+|++|++++++.+.+.++||+|+.||++.++++|.++|+..|.+.. ..+.|++||+|+|+|++
T Consensus 14 ~~~r~iKs~~EI~~mR~A~~i~~~~l~~~~~~ikpGvte~el~~~~~~~i~~~ga~~~~~~~-~~~~g~~f~~~vS~N~~ 92 (401)
T 2q8k_A 14 QQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFKKEK-EMKKGIAFPTSISVNNC 92 (401)
T ss_dssp CCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHCC-CCBHHHHHHHHHHHHHHHHHTSSTTCT-TCCEEEEEEEEEEETTE
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCChhhcccc-cccCCCCCCcEEeCCcc
Confidence 56889999999999999999999999999999999999999999999999999886675421 13467899999999999
Q ss_pred ccCCCCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhH
Q 016129 88 LCHFSPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ---DGPVTGRAADVIAAANTAAEVALRLVRPGKKNKD 163 (394)
Q Consensus 88 ~~H~~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG---~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~d 163 (394)
+|||+|.+++ +++|++||+|+||+|++|+||++|++|||+|| +++++++++++|+++++|++++++++|||++++|
T Consensus 93 v~H~~P~~~d~~~~L~~GDiV~ID~G~~~~GY~sD~tRT~~vG~~~eg~~s~~~~~l~~~~~~a~~~~i~~~kPG~~~~d 172 (401)
T 2q8k_A 93 VCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVVDVAQGTQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQ 172 (401)
T ss_dssp EECCCCCTTSCCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTCC-CCCBCHHHHHHHHHHHHHHHHHHHHCSTTCBHHH
T ss_pred cccCCCCCCCCCcccCCCCEEEEEEEEEECCEEEEEEEEEEECCccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHH
Confidence 9999996443 58999999999999999999999999999999 2348999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCC--CCCceeeCCcEEEEceeeecCCCCCcccCCCce
Q 016129 164 VTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTR--VDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQT 241 (394)
Q Consensus 164 V~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~--~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~ 241 (394)
|+.+++++++++||.++++++|||||+++||.|..|+.+++.+.+ +.+.+|++||||+|||++++|+|+++..+|+ |
T Consensus 173 I~~ai~~~~~~~G~~~v~~~~GHGIG~~~HE~P~~i~~~~~~~~~~~~~~~~L~~GmV~tIEP~i~~G~g~v~~~~~~-~ 251 (401)
T 2q8k_A 173 VTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQR-T 251 (401)
T ss_dssp HHHHHHHHHHTTTCEECTTCEEEEEBTTBSSCSCEEESSCCHHHHHHSCCCBCCTTCEEEEEEEEESSCCCCEECSCC-C
T ss_pred HHHHHHHHHHHcCCeecCCcccccCCCccccCCcccccCCCcccccCCCCCEeCCCCEEEEeCceEecCCEEEECCCC-c
Confidence 999999999999999999999999999999999645433321111 2467999999999999999999999987776 9
Q ss_pred EEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEE
Q 016129 242 TIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVL 320 (394)
Q Consensus 242 tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvl 320 (394)
|||+|+++.+|+|||++||+||++|+++|++|||++|| +++++++||+.||++||||.|||||+++||+++|||||||+
T Consensus 252 t~y~~~~~~~~~lk~~~sr~~l~~i~~~~~~~pF~~r~l~~~~~~~~g~~e~~~~~~l~~~~vl~t~dg~~~Aq~EhTvl 331 (401)
T 2q8k_A 252 TIYKRDPSKQYGLKMKTSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVL 331 (401)
T ss_dssp CEEEECTTCCCCCSSHHHHHHHHHHHHHHTTSCEEGGGCC--HHHHHHHHHHHHTTSEEEECCEECCTTCCEEEEEEEEE
T ss_pred eEEeeccccccccccHHHHHHHHHHHHhCCCCccchhhhCcchhHHHHHHHHHHcCCccCCCceEeeCCCEEEEEEEEEE
Confidence 99999999999999999999999999999999999999 68899999999999999999999999999999999999999
Q ss_pred EcCCCceeecCCCC--ccccCCCCCCcHHHHHHHHccccccccCCCCCcCCCC
Q 016129 321 LMPNGSDRITSHTL--QEIQSTKTIDDPEIKAWLALGIKTKKKGGGKKKKGKK 371 (394)
Q Consensus 321 vt~~G~~~lT~~~~--~~~~s~~~~~d~e~~~ll~~~~~~~~~~~~~~~~~~~ 371 (394)
||++|+++||..|+ ++++|+++|+||||++||++|+++|+|||||++++++
T Consensus 332 vt~~G~eilT~~~~~~~~~~s~~~~~d~e~~~~l~~~~~~~~~~~~~~~~~~~ 384 (401)
T 2q8k_A 332 LMPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKT 384 (401)
T ss_dssp EETTEEEECCCCCCCGGGBCCSCCCCCHHHHHHHHSCC---------------
T ss_pred ECCCCcEEecCCCCCHhhccCCCccCcHHHHHHHhcccccccccccccccccc
Confidence 99999999999887 8999999999999999999999888777777655554
No 2
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=100.00 E-value=3.8e-74 Score=567.24 Aligned_cols=303 Identities=23% Similarity=0.357 Sum_probs=277.7
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCC
Q 016129 12 DLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHF 91 (394)
Q Consensus 12 ~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~ 91 (394)
...|++||++||+|++|++++++.+.+.++||+|+.||++.+++.+.+.|+..- ..+++||+|+|.|++++||
T Consensus 40 ~~~s~~EI~~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~-------~~~~aFpt~~s~N~~~~H~ 112 (360)
T 2nw5_A 40 NFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGER-------NNGIGFPAGMSMNSCAAHY 112 (360)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSG-------GGGEEEEEEEEETTEEECC
T ss_pred hhCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCc-------cCccccCceeeccccccCC
Confidence 445999999999999999999999999999999999999999999998865321 1357899999999999999
Q ss_pred CCCCCC-CccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHH
Q 016129 92 SPLASD-ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQK 170 (394)
Q Consensus 92 ~P~~~~-~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~ 170 (394)
+|+.++ +++|++||+|+||+|++|+||++|+||||+++ ++++++++++++|++++++++|||++++||++++++
T Consensus 113 ~P~~~d~~~~L~~GDlV~ID~G~~~~GY~sD~tRT~~v~-----~~~~~l~~av~eA~~aai~~~kPGv~~~dI~~ai~~ 187 (360)
T 2nw5_A 113 TVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFK-----ENLEPLLVAAREGTETGIKSLGVDVRVCDIGRDINE 187 (360)
T ss_dssp CCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECC-----GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHH
T ss_pred CCCcccCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcC-----HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 998554 68999999999999999999999999999995 578999999999999999999999999999999999
Q ss_pred HHHHCCC---------ccccCcccccccc-ccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCc
Q 016129 171 VAAAHDC---------KIVEGVLSHQLKQ-FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQ 240 (394)
Q Consensus 171 ~~~~~G~---------~~~~~~~GHgiG~-~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~ 240 (394)
+++++|| .++.+++|||||+ .+|+.| .|++... +++.+|++||||+|||++++|.|++|. +.+
T Consensus 188 vi~~~G~~~~g~~~~~~~v~~~~GHgIG~y~iHe~P-~I~~~~~----~~~~~Le~GmV~aIEP~i~~G~G~Vr~--~~~ 260 (360)
T 2nw5_A 188 VISSYEVEIGGRMWPIRPISDLHGHSISQFRIHGGI-SIPAVNN----RDTTRIKGDSFYAVETFATTGKGSIDD--RPP 260 (360)
T ss_dssp HHTTCEEECSSSEEECEECTTCCEEEEBTTBSCCSC-EECSSCC----CCCCBCCSSEEEEEEEEEESSCSCCEE--CSC
T ss_pred HHHHcCCccccccccccccCCeeEeeecCceeccCC-EeccccC----CCCcEEeCCcEEEEeceEECCcceEEe--CCc
Confidence 9999985 4788999999999 899998 7765432 367899999999999999999999974 446
Q ss_pred eEEEecccccccccCchhHHHHHHHHHhhCCCCccccccc-h----hhhhhhHHHHHHHCCCccccCeeeecCCceeEEE
Q 016129 241 TTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARAL-E----EKRARLGLVECVNHELLQPYPVLHEKPGDYVAHI 315 (394)
Q Consensus 241 ~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~-~----~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~ 315 (394)
+|||+++++.+|+|||++||+||++|+++|++|||++||+ + +++++|||+||++||+|+|||||++++|++||||
T Consensus 261 ~~~y~~~~~~~~~l~~~~~r~~l~~i~~~f~~lpF~~R~l~~~~~~~~~~~~~l~~l~~~g~~~~ypvl~e~~g~~vaqf 340 (360)
T 2nw5_A 261 CSHFVLNTYKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGGSLKSVNLLTMMGLLTPYPPLNDIDGCKVAQF 340 (360)
T ss_dssp CCCEEECSSCCCCCCSHHHHHHHHHHHHHTTTCCBCHHHHHHTTCSTTCSHHHHHHHHHTTSEEECCCEECSTTCCEEEE
T ss_pred eeEEEEcCCCCCCCCCHHHHHHHHHHHHhCCCCCcChhhhcccccchHHHHHHHHHHHHCCCcccCCccEecCCCEEEEE
Confidence 9999999999999999999999999999999999999994 4 7899999999999999999999999999999999
Q ss_pred EEEEEEcCCCceeecCCC
Q 016129 316 KFTVLLMPNGSDRITSHT 333 (394)
Q Consensus 316 e~Tvlvt~~G~~~lT~~~ 333 (394)
||||||+++|++++|..+
T Consensus 341 e~Tv~~~~~g~~~~t~g~ 358 (360)
T 2nw5_A 341 EHTVYLSEHGKEVLTRGD 358 (360)
T ss_dssp EEEEEEETTEEEECSCCS
T ss_pred EEEEEECCCCcEEecCCC
Confidence 999999999999999753
No 3
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=100.00 E-value=1.5e-71 Score=536.94 Aligned_cols=289 Identities=28% Similarity=0.449 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCC
Q 016129 17 EVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLAS 96 (394)
Q Consensus 17 ~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~ 96 (394)
+||++||+|++|++++++.+.+.++||+|+.||++.+++++.++|+ ..+||+|+|+|+.++||+|+.+
T Consensus 1 eEI~~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~------------~~~fp~~vs~n~~~~H~~p~~~ 68 (295)
T 1xgs_A 1 MDTEKLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGG------------KPAFPVNLSINEIAAHYTPYKG 68 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTC------------EESSCCEEEETTEEECCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCC------------CCCCCcEEeeCCccccccCCCC
Confidence 4899999999999999999999999999999999999999998865 2469999999999999999755
Q ss_pred CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCC
Q 016129 97 DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHD 176 (394)
Q Consensus 97 ~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G 176 (394)
++++|++||+|+||+|++|+||++|++|||+||+ +++++|+++++|++++++++|||++++||+++++++++++|
T Consensus 69 ~~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~-----~~~~l~~~~~~a~~~~i~~~kpG~~~~dI~~a~~~~~~~~G 143 (295)
T 1xgs_A 69 DTTVLKEGDYLKIDVGVHIDGFIADTAVTVRVGM-----EEDELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRG 143 (295)
T ss_dssp CCCBCCTTCEEEEEEEEEETTEEEEEEEEEETTS-----CCCHHHHHHHHHHHHHHHHCSTTCBTHHHHHHHHHHHHTTT
T ss_pred CCccccCCCEEEEEEeEEECCEEEEEEEEEEeCH-----HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHCC
Confidence 5789999999999999999999999999999993 67899999999999999999999999999999999999999
Q ss_pred CccccCcccccccc-ccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccccccccC
Q 016129 177 CKIVEGVLSHQLKQ-FVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLK 255 (394)
Q Consensus 177 ~~~~~~~~GHgiG~-~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk 255 (394)
|.++.+++|||||. .+||+| .|+++.. ++.+.+|++||||+|||+++.|.|.++.. + ++|||+++ .+|+||
T Consensus 144 ~~~~~~~~GHgIG~l~~He~p-~ip~~~~---~~~~~~L~~GmV~tIEP~i~~G~g~v~~~-~-~~~iy~~~--~~~~l~ 215 (295)
T 1xgs_A 144 FKPIVNLSGHKIERYKLHAGI-SIPNIYR---PHDNYVLKEGDVFAIEPFATIGAGQVIEV-P-PTLIYMYV--RDVPVR 215 (295)
T ss_dssp CEECTTCCEEECBTTBSSCSC-EECSSCC---TTCCCBCCTTCEEEECCEEESSCSCEEEE-E-EEEEEEEC--CCCCCS
T ss_pred CeEECCCcCCCCCCcccCCCC-cCCccCC---CCCCCEeCCCCEEEEcceeECCCCEEEEC-C-ceEEEEec--CCcccc
Confidence 99899999999995 899998 6655432 22368999999999999999999999754 3 69999986 499999
Q ss_pred chhHHHHHHHHHhhCCCCccccccch----hhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeec
Q 016129 256 MKASRFIFSEINQKFPIMPFTARALE----EKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRIT 330 (394)
Q Consensus 256 ~~~~r~~~~~i~~~~~~~pf~~r~~~----~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT 330 (394)
|++||+||++|+++|++|||+.||.+ +++++|||+||++||+|.|||||+++||++||||||||+||++|+++||
T Consensus 216 ~~~~~~~~~~i~~~~~~lpf~~~w~~~~~~~~~~~~~l~~~~~~~~~~~y~vl~~~~g~~~aq~ehTv~vt~~g~~ilt 294 (295)
T 1xgs_A 216 VAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTT 294 (295)
T ss_dssp SHHHHHHHHHHHHHTTTSCEESGGGTTTSCHHHHHHHHHHHHHHTSEEEEEEEEETTCCCEEECBEEEEECSSSEEETT
T ss_pred cHHHHHHHHHHHHhCCCCCcchhhhhcccchhHHHHHHHHHHHCCCcccCCceEecCCCeEeEEEEEEEECCCCcEEec
Confidence 99999999999999999999999954 7899999999999999999999999999999999999999999999999
No 4
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=100.00 E-value=1.1e-71 Score=550.83 Aligned_cols=306 Identities=23% Similarity=0.344 Sum_probs=272.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCc
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNT 87 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~ 87 (394)
++++.++++++|++||+||+|++++++.+.+.++||+|+.|||+.+++++++.++.. ..+|++||+|+|+|++
T Consensus 34 ~~~~~~~~~d~l~~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~-------~~~g~~FP~ciSvN~~ 106 (358)
T 3fm3_A 34 MEIENFTESDILQDARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGE-------RNNGIGFPAGMSMNSC 106 (358)
T ss_dssp CEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTS-------GGGGEEEEEEEEETTE
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCC-------cccCCCCCcEEeeCCE
Confidence 557889999999999999999999999999999999999999999999999987743 2346789999999999
Q ss_pred ccCCCCCCC-CCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016129 88 LCHFSPLAS-DETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 88 ~~H~~P~~~-~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
+|||+|+.. ++++|++||+|+||+|++++||++|++||+.||+ ...++++++++|+++++++++||+++++|+.
T Consensus 107 v~Hg~P~~~~~~~~L~~GDiV~ID~G~~~dGY~sD~arT~~vg~-----~~~~l~~~~~~al~aai~~~~pG~~~~dig~ 181 (358)
T 3fm3_A 107 AAHYTVNPGEQDIVLKEDDVLKIDFGTHSDGRIMDSAFTVAFKE-----NLEPLLVAAREGTETGIKSLGVDVRVCDIGR 181 (358)
T ss_dssp EECCCCCTTCCCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCG-----GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred EEecCCCCCCCCeEecCCCEEEEEeeEEECCEEEEEEEeccccc-----cchhHHHHHHHHHHHHHHhhhcCCccccccH
Confidence 999999753 3589999999999999999999999999999984 3457889999999999999999999999999
Q ss_pred HHHHHHHHCCC---------ccccCcccccccccc-ccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCccc
Q 016129 167 AIQKVAAAHDC---------KIVEGVLSHQLKQFV-IDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLL 236 (394)
Q Consensus 167 ai~~~~~~~G~---------~~~~~~~GHgiG~~~-~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~ 236 (394)
+++++++++|+ .++++++|||||++. |+.| .||++.+ +.+.+|++||||||||++++|.|+++..
T Consensus 182 ai~~v~~~~~~~v~~~~~~~~~v~~~~GHgiG~~~~he~~-~ip~~~~----~~~~~le~GmV~tIEP~is~G~g~v~~~ 256 (358)
T 3fm3_A 182 DINEVISSYEVEIGGRMWPIRPISDLHGHSISQFRIHGGI-SIPAVNN----RDTTRIKGDSFYAVETFATTGKGSIDDR 256 (358)
T ss_dssp HHHHHHTTCEEECSSSEEECEECTTCCEEEEBTTBSCCSC-EECSSCC----CCCCBCCSSEEEEEEEEEESSCSCCEEC
T ss_pred HHHHHHhhccceeccccccccccccccccccCCccccCCC-ccCccCC----CCCcEEeeeeeEEeeeeeecCCceEEEC
Confidence 99999999884 446899999999965 5555 7877643 2567999999999999999999999765
Q ss_pred CCCceEEEecccccccccCchhHHHHHHHHHhhCCCCcccccc-chhhhhhhH----HHHHHHCCCccccCeeeecCCce
Q 016129 237 DEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARA-LEEKRARLG----LVECVNHELLQPYPVLHEKPGDY 311 (394)
Q Consensus 237 ~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~-~~~~~~~~g----~~e~~~~~ll~~y~v~~~~~g~~ 311 (394)
.+ .++|.++.+.+|+||++++|++|++|+++|++|||++|| +|+..+++| |.+|++||+|.|||||+++||++
T Consensus 257 ~~--~~~~~~~~~~~~~l~~~~~r~~l~~i~~~~~tlPF~~R~l~d~~~~~~~~~~~l~~l~~~~iv~~YpvL~~~dg~~ 334 (358)
T 3fm3_A 257 PP--CSHFVLNTYKSRKLFNKDLIKVYEFVKDSLGTLPFSPRHLDYYGLVKGGSLKSVNLLTMMGLLTPYPPLNDIDGCK 334 (358)
T ss_dssp SC--CCCEEECSSCCCCCCSHHHHHHHHHHHHHTTTCCBCHHHHHHTTCSTTCSHHHHHHHHHTTSEEECCCEECSTTCC
T ss_pred CC--ceEEEeccccchhhccHHHHHHHHHHHHhcCCcccchhhhcccchhhhhHHHHHHHHHhcCCcccCCceEeeCCCE
Confidence 55 456777789999999999999999999999999999999 577777665 55666799999999999999999
Q ss_pred eEEEEEEEEEcCCCceeecCC
Q 016129 312 VAHIKFTVLLMPNGSDRITSH 332 (394)
Q Consensus 312 ~aq~e~Tvlvt~~G~~~lT~~ 332 (394)
||||||||+||++|+++||..
T Consensus 335 ~AqfEhTvlvt~~G~eilT~g 355 (358)
T 3fm3_A 335 VAQFEHTVYLSEHGKEVLTRG 355 (358)
T ss_dssp EEEEEEEEEEETTEEEESSCC
T ss_pred EEEEEEEEEECCCCCEEcCCC
Confidence 999999999999999999964
No 5
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=100.00 E-value=6.3e-71 Score=559.07 Aligned_cols=309 Identities=28% Similarity=0.468 Sum_probs=275.7
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC
Q 016129 7 EEKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN 86 (394)
Q Consensus 7 ~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~ 86 (394)
+-|++.+||++||+.||+|++|+.++++.+.+.++||+|+.|||+.++..+.+..... +...+++||+|+|+|+
T Consensus 154 elR~i~iKs~~EIe~mR~A~~Ia~~al~~~~~~ikpGvTe~ELa~~le~~~~~~i~~~------Ga~~g~~FP~ivSvN~ 227 (478)
T 1b6a_A 154 EKKALDQASEEIWNDFREAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKEN------GLNAGLAFPTGCSLNN 227 (478)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHCCTTSBHHHHHHHHHHHHHHHHTCB------TTTEEEEEEEEEEETT
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHHHHhc------CCcccCCCCeEEECCC
Confidence 3455667999999999999999999999999999999999999999988877642110 0113578999999999
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016129 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
+++||+|+.+++++|++||+|+||+|++|+||++|++|||+|| ++++++|+++++|++++|++++||++++||+.
T Consensus 228 ~v~Hg~P~~~d~r~Lk~GDiV~ID~G~~~dGY~sD~tRT~~Vg-----~e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ 302 (478)
T 1b6a_A 228 CAAHYTPNAGDTTVLQYDDICKIDFGTHISGRIIDCAFTVTFN-----PKYDTLLKAVKDATNTGIKCAGIDVRLCDVGE 302 (478)
T ss_dssp EEECCCCCTTCCCBCCTTCCEEEEEEEEETTEEEEEEEEECSS-----GGGHHHHHHHHHHHHHHHHHCCTTCBHHHHHH
T ss_pred ccccCCCCcccCccccCCCeEEEEEEEEECCEEEEEEEEEEeC-----HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 9999999754568999999999999999999999999999996 58999999999999999999999999999999
Q ss_pred HHHHHHHHCCCc---------cccCcccccc-ccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCccc
Q 016129 167 AIQKVAAAHDCK---------IVEGVLSHQL-KQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLL 236 (394)
Q Consensus 167 ai~~~~~~~G~~---------~~~~~~GHgi-G~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~ 236 (394)
+++++++++||. ++++++|||| |+.+||+| .+|++. ++.+.+|++||||+|||+++.|.|.+..
T Consensus 303 ai~~~i~~~G~~l~g~~~~~~~v~h~~GHGIGGl~iHE~P-~vP~~~----~~~~~~Le~GMVftIEP~i~~G~G~~~e- 376 (478)
T 1b6a_A 303 AIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGK-TVPIVK----GGEATRMEEGEVYAIETFGSTGKGVVHD- 376 (478)
T ss_dssp HHHHHHHTCEEEETTEEEECEECTTCEEEEEBTTBSCCSC-EEESSS----SCCCCBCCTTCEEEEEEEEESSCSCCEE-
T ss_pred HHHHHHHHcCCCcccccccceeecCcceeCCCCccccCCC-ccceec----CCCCCEeCCCCEEEEeCeeECCCCEEEE-
Confidence 999999999974 6789999999 68999998 565553 2356899999999999999999876643
Q ss_pred CCCceEEEecccc-cccccCchhHHHHHHHHHhhCCCCccccccch---hhhhhhHHHHHHHCCCccccCeeeecCCcee
Q 016129 237 DEKQTTIYKRAVD-KNYHLKMKASRFIFSEINQKFPIMPFTARALE---EKRARLGLVECVNHELLQPYPVLHEKPGDYV 312 (394)
Q Consensus 237 ~~~~~tv~~~~~~-~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~---~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~ 312 (394)
+.++|||+++++ .+|+|||++||+||++|+++|++|||++||++ +++++|||+||++||||.|||+|++++|++|
T Consensus 377 -d~~~~iy~~~~d~~~~~lk~~~ar~ll~~I~~~f~tlpF~~rw~d~~~~~~~~~gl~~l~~~g~v~~yp~l~t~dg~~~ 455 (478)
T 1b6a_A 377 -DMECSHYMKNFDVGHVPIRLPRTKHLLNVINENFGTLAFCRRWLDRLGESKYLMALKNLCDLGIVDPYPPLCDIKGSYT 455 (478)
T ss_dssp -CSCCCEEEECTTCCCCCCCSHHHHHHHHHHHHHTTTSCEEHHHHHHTTCCSCHHHHHHHHHTTSEEEECCEECSTTCCE
T ss_pred -CCceeEEeecccccccccccHHHHHHHHHHHHhcCCCCccchhhcccchhHHHHHHHHHHHCCCcccCCceEcCCCCEE
Confidence 346999999877 69999999999999999999999999999953 6789999999999999999999999999999
Q ss_pred EEEEEEEEEcCCCceeecCCC
Q 016129 313 AHIKFTVLLMPNGSDRITSHT 333 (394)
Q Consensus 313 aq~e~Tvlvt~~G~~~lT~~~ 333 (394)
||||||||||++|++|||..+
T Consensus 456 AQfEHTvlvt~~g~evlT~~~ 476 (478)
T 1b6a_A 456 AQFEHTILLRPTCKEVVSRGD 476 (478)
T ss_dssp EEEEEEEEECSSCEEETTCCS
T ss_pred eeEEEEEEECCCccEEeCCCC
Confidence 999999999999999999653
No 6
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-68 Score=545.08 Aligned_cols=315 Identities=29% Similarity=0.450 Sum_probs=262.6
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhc---------cCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccce
Q 016129 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSEC---------KPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPS 80 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i---------~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~ 80 (394)
+..+-+++.+++||.||+|++++|+.+.++| +||++..|||..+|.+|.++++++|++++ ..+|++|||
T Consensus 37 ekniln~dvltKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~~akvyk~K~--~~KGIAFPT 114 (614)
T 4b6a_t 37 DKNILQESVLNKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTRLEQYYKNKV--NERGIAIPT 114 (614)
T ss_dssp CSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHHHHTSSTTCS--CCEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHHHHhhhcCCc--ccCCCccCc
Confidence 3478899999999999999999999999887 56688999999999999999999998853 678999999
Q ss_pred eecCCCcccCCCCCCCC-------------------CccccCCCEEEEEeeeEECceEEeEEEEEEeCC-----------
Q 016129 81 CVSVNNTLCHFSPLASD-------------------ETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQD----------- 130 (394)
Q Consensus 81 ~vs~n~~~~H~~P~~~~-------------------~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~----------- 130 (394)
|+|+|+++|||+|+.+| +.+|++||+|+||+|+|+|||++|+++|++||.
T Consensus 115 ~ISvN~~vaHysP~~~D~~~~~~~~~~~~~~~~~~~~~vLk~GDVVKIDLGvHIDGyiadvA~Tvvvg~~~~~~~~~~~~ 194 (614)
T 4b6a_t 115 TIDIDQISGGWCPEIDDTQNLLNWNKGKDSTFASSVTGTLRPGDLVKITLGVHIDGYTSEVSHTMVIYPVDETKPILQPT 194 (614)
T ss_dssp EEEETTEEECCCCCTTS------------------CCCBCCTTCEEEEEEEEEETTEEEEEEEEEECCCCTTTSTTTTTT
T ss_pred eecHHHcccCCCCCCcchhhcccccccccccccccccccccCCCEEEEEeeEEECCeEEEEEEEEEECCccccccccccc
Confidence 99999999999998655 347999999999999999999999999999983
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHc----------------CCCCChhHHHHHHHHHHHHCCCccccCcccccccccccc
Q 016129 131 GPVTGRAADVIAAANTAAEVALRLV----------------RPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVID 194 (394)
Q Consensus 131 ~~~s~~~~~l~~a~~~a~~a~i~~l----------------kPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e 194 (394)
+|.+++.+|++.|++.|.+++++++ +||++.++|..+|+++++.|||.++++++||+|++++++
T Consensus 195 ~pvtGrkADli~AA~~A~EaalrLl~~~~~~e~l~a~l~~~~~gvt~~~It~~IekvaksY~ck~Vegl~sH~i~r~~i~ 274 (614)
T 4b6a_t 195 GPLLGGKADAVAAAHIAMETVVALLACALTPEKLPASLGGTSSGITGQLIRTIVDTIARSYNCGVVPGSRVRRIRRFLAG 274 (614)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHHHHC----------------STTCBHHHHHHHHHHHHHTTTCEECTTCEEEEEBTTBSS
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhccCCCcchHHHHHHHHHHHhcCCcEEecccccccccceecC
Confidence 3578999999999999999999988 999999999999999999999999999999999999999
Q ss_pred CCceecccCCCC--------------------------------------CCCCCceeeCCcEEEEceeeecCCCCC---
Q 016129 195 GNKVVLSVSNPD--------------------------------------TRVDDAEFEENEVYAVDIVTSTGDGKP--- 233 (394)
Q Consensus 195 ~p~~I~~~~~~~--------------------------------------~~~~~~~le~GmV~aIEp~is~g~g~~--- 233 (394)
+++.|++.+... .+.++++|++|+||+||+++++|+|.+
T Consensus 275 g~k~Ii~~~~~kgv~~~e~hqe~~~~~~~~~k~~~~v~~~~~~~~~~~~~~~~Dd~~~EeGEVYaIDi~~STG~G~~~~g 354 (614)
T 4b6a_t 275 QNEGIVAEREYKGVVWTESHQEADLLSNTDAKDLTVVDRGQSTPFTNVSAIPSDDFVVQSGEVYLIDLKMASLEHCTKKG 354 (614)
T ss_dssp CSCEEESS------------------------------------CCHHHHTTSCCCBCCTTCEEEEEEEEESSCC-----
T ss_pred CCceeccccccccccccccchhhhhhccccccccccccccccccccccccccCCceeecCCcEEEEEEEeecCCCccccc
Confidence 999888755321 123578899999999999999998732
Q ss_pred -----------------cccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccc----------------
Q 016129 234 -----------------KLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARAL---------------- 280 (394)
Q Consensus 234 -----------------~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~---------------- 280 (394)
+. .+.|+|||+|+++.+|+|||++||+||++|+ ||++|||++||+
T Consensus 355 ~~tl~~id~~tGk~~k~~e-~~~RtTiY~R~~~~~Y~LKlksSR~lLseI~-K~gt~PFslR~Ls~~fP~~~~~~~~~~~ 432 (614)
T 4b6a_t 355 LVTLETVDSYTGKSHKAGE-LIARPGAYVRDFAQTHILKLKTSRQLLTKID-KQGVYPFKLSHLSSNFPFVHENEEELQS 432 (614)
T ss_dssp ---------------CCEE-CSCCCCEEEECTTCCCCCSSHHHHHHHHHHH-TCSSSEEEGGGC----------------
T ss_pred ccccccccccccccccccc-cccccceEEecCCcceecccHHHHHHHHHHh-ccCCCCccHHHhccccCccccchhhhhh
Confidence 22 2346999999999999999999999999997 589999999996
Q ss_pred ---hhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeecC
Q 016129 281 ---EEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRITS 331 (394)
Q Consensus 281 ---~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT~ 331 (394)
|++++||||+||++|+||.||||+++|.|.++|||++| +|||...++.
T Consensus 433 ~~edek~aRlGl~E~vnh~Ll~pyPVl~eK~g~~va~fk~T---~pnG~~~id~ 483 (614)
T 4b6a_t 433 LKKDLKSFRLGMSEISNNYLCVESPIQIARWVPWDHILKAT---NPNGNLSYDA 483 (614)
T ss_dssp ----CHHHHHHHHHHHHTTSEEEECCEECC------------------------
T ss_pred hhhhHHHhhccHHHHHhCCCCcccceeEEecccceeEEEcc---cCCCCccccc
Confidence 67899999999999999999999999999999999999 7999998875
No 7
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=100.00 E-value=3.8e-54 Score=409.48 Aligned_cols=252 Identities=19% Similarity=0.310 Sum_probs=229.1
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCccc
Q 016129 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLC 89 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~ 89 (394)
||.|||++||++||+|++|++++++.+++.++||+||.||++.++.++.++|+..... ++.++++.+|.|.|+.++
T Consensus 1 M~~IKs~~EI~~mr~A~~i~~~a~~~~~~~ikpG~tE~el~~~~~~~~~~~G~~~~~~----~~~~~~~~v~~g~~~~~~ 76 (264)
T 3tb5_A 1 MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQI----GYEGYKYATCCSINDEIC 76 (264)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTT----TGGGCCCSEEEEETTEEE
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHHcCCCcccc----cccCCCcceEECCccccc
Confidence 6789999999999999999999999999999999999999999999999998864221 334566678889999999
Q ss_pred CCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHH
Q 016129 90 HFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQ 169 (394)
Q Consensus 90 H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~ 169 (394)
|+.|+ +++|++||+|+||+|+.|+||++|+||||++|+ ++++++++|+++++|++++++++|||++++||+++++
T Consensus 77 H~~~~---~~~l~~Gdlv~iD~g~~~~GY~sD~tRT~~vG~--~~~~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~ 151 (264)
T 3tb5_A 77 HGFPR---KKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGE--STPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQ 151 (264)
T ss_dssp CCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHH
T ss_pred CCCCC---CccccCCCEEEEeccceecceeeecccccccCC--ccHHHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHH
Confidence 99997 799999999999999999999999999999997 8999999999999999999999999999999999999
Q ss_pred HHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecccc
Q 016129 170 KVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVD 249 (394)
Q Consensus 170 ~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~ 249 (394)
++++++||..+.+++|||+|+.+|+.| .+... ..++.+.+|++||||+|||+++.+.+.++..+|+ ||++
T Consensus 152 ~~~~~~g~~~~~~~~GHgiG~~~~e~p-~i~~~---~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~d~-wt~~----- 221 (264)
T 3tb5_A 152 TYVEGEGYGVVRDFVGHGIGPTIHESP-MIPHY---GEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNG-WTAY----- 221 (264)
T ss_dssp HHHHHTTCEECCSCCEEECSSSSSEEE-EECSS---CCTTCSCBCCTTCEEEECCEEESSCSCEEECTTS-SCEE-----
T ss_pred HHHHHcCCceeeeceecCCCCCCccCC-ccCcc---ccCCCCCCccCCcEEEEeeeEEcCCCceEEcCCC-CeEE-----
Confidence 999999999999999999999999998 44332 2345678999999999999999999998888887 8887
Q ss_pred cccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceee
Q 016129 250 KNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRI 329 (394)
Q Consensus 250 ~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~l 329 (394)
+++|.+.+|||||||||++|+++|
T Consensus 222 --------------------------------------------------------~~~g~~gvriEd~vlVT~~G~e~L 245 (264)
T 3tb5_A 222 --------------------------------------------------------TEDGGLSCQYEHSLAITKEGPRIL 245 (264)
T ss_dssp --------------------------------------------------------ETTCCCEEECCEEEECCTTCCEET
T ss_pred --------------------------------------------------------ecCCccEEEeceEEEEcCCcCEEC
Confidence 468999999999999999999999
Q ss_pred cCCCCcc
Q 016129 330 TSHTLQE 336 (394)
Q Consensus 330 T~~~~~~ 336 (394)
|..|.++
T Consensus 246 T~~p~el 252 (264)
T 3tb5_A 246 TSQGEEL 252 (264)
T ss_dssp TCCSSTT
T ss_pred CCCCcch
Confidence 9988643
No 8
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=100.00 E-value=8.6e-53 Score=399.80 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=224.6
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcc
Q 016129 9 KELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTL 88 (394)
Q Consensus 9 ~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~ 88 (394)
.++.|||++||++||+|++|++++++.+++.++||+||.||++.++.++.++|+..... ++.+++..+|+|.|+.+
T Consensus 4 ~~~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~~----~~~~f~~iv~~g~n~~~ 79 (262)
T 3mx6_A 4 SMIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPL----NYKGFPKSICTSINHVV 79 (262)
T ss_dssp --CCCCCHHHHHHHHHHHHHHHHHHHHHGGGCCTTCBHHHHHHHHHHHHHHTTCEETTT----TGGGCCSSSEEEETTEE
T ss_pred CcceeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccc----ccCCCCcceEecccccc
Confidence 37899999999999999999999999999999999999999999999999987743110 22233333677999999
Q ss_pred cCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHH
Q 016129 89 CHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAI 168 (394)
Q Consensus 89 ~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai 168 (394)
+||.|+ +++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||++++||++++
T Consensus 80 ~H~~p~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~ 154 (262)
T 3mx6_A 80 CHGIPN---DKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGD--VAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAI 154 (262)
T ss_dssp ECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHH
T ss_pred cCCCCC---CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 999997 789999999999999999999999999999996 899999999999999999999999999999999999
Q ss_pred HHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcc-cCCCceEEEecc
Q 016129 169 QKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKL-LDEKQTTIYKRA 247 (394)
Q Consensus 169 ~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~-~~~~~~tv~~~~ 247 (394)
+++++++||..+.+++|||||+.+||.| .++++. .++.+.+|++||||+|||+++.|.+.++. .+|+ ||+.
T Consensus 155 ~~~~~~~G~~~~~~~~GHgiG~~~hE~p-~i~~~~---~~~~~~~L~~Gmv~tiEPgiy~g~~gvri~~~d~-w~~~--- 226 (262)
T 3mx6_A 155 QSYAEKHNYSVVRDYTGHGIGRVFHDKP-SILNYG---RNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDG-WTVT--- 226 (262)
T ss_dssp HHHHHHTTCEECCSCCEEECSSSSSEEE-EECSSC---CTTCSCBCCTTCEEEECCEEESSCSCEEECTTTS-CCEE---
T ss_pred HHHHHHcCCccCCCccccccCCcccCCC-cccccC---CCCCCCEeCCCCEEEEeCEEEcCCCeEEEecCCC-ceEE---
Confidence 9999999999888999999999999998 665432 23467899999999999999999888887 6776 7776
Q ss_pred cccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCce
Q 016129 248 VDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSD 327 (394)
Q Consensus 248 ~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~ 327 (394)
++++.+++||||||+||++|++
T Consensus 227 ----------------------------------------------------------~~~~~~~~~~Ed~v~Vt~~G~e 248 (262)
T 3mx6_A 227 ----------------------------------------------------------TRDKSLSAQFEHTIGVTKDGFE 248 (262)
T ss_dssp ----------------------------------------------------------ETTCCCEEECBEEEEECSSSEE
T ss_pred ----------------------------------------------------------ecCCCceeeeceEEEECCCcCe
Confidence 5788999999999999999999
Q ss_pred eecCCCCccc
Q 016129 328 RITSHTLQEI 337 (394)
Q Consensus 328 ~lT~~~~~~~ 337 (394)
+||..|.+++
T Consensus 249 ~LT~~p~~l~ 258 (262)
T 3mx6_A 249 IFTLSPKKLD 258 (262)
T ss_dssp ESCCCTTCCC
T ss_pred ECCCCCcccC
Confidence 9999887654
No 9
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=100.00 E-value=8.2e-52 Score=393.09 Aligned_cols=249 Identities=21% Similarity=0.349 Sum_probs=222.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNN 86 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~ 86 (394)
.-||.|||++||++||+|++|++++++.+.+.++||+||.||++.++.++.+.|+.. |.. +.++++.+|+|.|+
T Consensus 11 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~-----~~~f~~~v~~g~n~ 85 (262)
T 1o0x_A 11 HHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKG-----YGGYKYATCVSVNE 85 (262)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHHHHGGGGCSTTCBHHHHHHHHHHHHHHHTCEESSTT-----GGGCCCSEEEEETT
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccc-----ccCCCcceEecccc
Confidence 568999999999999999999999999999999999999999999999999998753 321 22444447779999
Q ss_pred cccCCCCCCCCCcc-ccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 87 TLCHFSPLASDETV-LQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 87 ~~~H~~P~~~~~~~-L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
.++||.|+ +++ |++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||++++||+
T Consensus 86 ~~~H~~p~---~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~ 160 (262)
T 1o0x_A 86 EVVHGLPL---KEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGE--TDERGKELVRVTREVLEKAIKMIKPGIRLGDVS 160 (262)
T ss_dssp BCSCCCCC---TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSC--CCHHHHHHHHHHHHHHHHHHHTCCTTSBHHHHH
T ss_pred cccCCCCC---CCcccCCCCEEEEEEEEEECCEEEEEEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999997 678 999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEe
Q 016129 166 EAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYK 245 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~ 245 (394)
++++++++++||..+.+++|||||+.+||.| .+++. ..++.+.+|++||||+|||+++.|.+.++.++++ |+++
T Consensus 161 ~~~~~~~~~~G~~~~~~~~GHgiG~~~he~p-~i~~~---~~~~~~~~L~~Gmv~tiEPgi~~g~~~v~~~~~~-w~~~- 234 (262)
T 1o0x_A 161 HCIQETVESVGFNVIRDYVGHGVGRELHEDP-QIPNY---GTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDG-WTAV- 234 (262)
T ss_dssp HHHHHHHHHTTCEECCSSCEEECSSSSSEEE-EECSC---CCTTCSCBCCTTCEEEECCEEESSCCCEEECTTS-SCEE-
T ss_pred HHHHHHHHHcCCcccCCcccCcccccccCCC-ccCCC---CCCCCCCccCCCCEEEECCEEEcCCCceeecCCC-ceEE-
Confidence 9999999999999888999999999999999 55443 2234578999999999999999999988876665 7776
Q ss_pred cccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCC
Q 016129 246 RAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNG 325 (394)
Q Consensus 246 ~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G 325 (394)
+++|.+++||||||+||++|
T Consensus 235 ------------------------------------------------------------~~~g~~gvriEdtvlVt~~G 254 (262)
T 1o0x_A 235 ------------------------------------------------------------TVDGSRCAHFEHTILITENG 254 (262)
T ss_dssp ------------------------------------------------------------ETTCCCEEECBEEEEECSSS
T ss_pred ------------------------------------------------------------eeCCCcEEEEEEEEEECCCc
Confidence 57899999999999999999
Q ss_pred ceeecCC
Q 016129 326 SDRITSH 332 (394)
Q Consensus 326 ~~~lT~~ 332 (394)
+++||..
T Consensus 255 ~e~LT~~ 261 (262)
T 1o0x_A 255 AEILTKE 261 (262)
T ss_dssp EEESSCC
T ss_pred cEeCCCC
Confidence 9999953
No 10
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=100.00 E-value=1.3e-51 Score=404.93 Aligned_cols=248 Identities=20% Similarity=0.294 Sum_probs=220.0
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCc
Q 016129 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNT 87 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~ 87 (394)
.+.|||++||++||+|++|++++++.+++.++||+|+.||++.+++++.+.|+.... ....+|| +|.|.|++
T Consensus 60 ~~~VKs~~EI~~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~------~~~~~fp~iv~~g~n~~ 133 (337)
T 4fuk_A 60 HDDSKKTAEIQRIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSP------LNYYGFPKSVCTSVNEV 133 (337)
T ss_dssp TCTTC--CHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETT------TTGGGCCSSSEEEETTE
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccC------CCCCCcCceeecccccc
Confidence 568999999999999999999999999999999999999999999999998875321 1234577 55689999
Q ss_pred ccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHH
Q 016129 88 LCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEA 167 (394)
Q Consensus 88 ~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~a 167 (394)
++|+.|+ ++.|++||+|+||+|+.|+||++|++|||++|+ ++++++++|+++++|++++++++|||++++||+++
T Consensus 134 ~~H~~~~---~~~l~~GD~v~iD~g~~~~GY~sD~tRT~~vG~--~~~~~~~l~~~v~ea~~~ai~~~kpG~~~~di~~~ 208 (337)
T 4fuk_A 134 ICHGIPD---SRELEEGDILNIDVSSYLNGFHGDLNETVFIGR--PDDDSVRLVHAAYECLCAGIGVVKPEALYKQVGDA 208 (337)
T ss_dssp EECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEESSS--CCHHHHHHHHHHHHHHHHHHTTCSTTCBTTHHHHH
T ss_pred ccCCCCC---CccccCCCEEEEecceeECCEEEeeeeeEEeCC--ccHHHHHHHHHHHHHHHHHHhhccccccHHHHHHH
Confidence 9999997 799999999999999999999999999999997 89999999999999999999999999999999999
Q ss_pred HHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEecc
Q 016129 168 IQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRA 247 (394)
Q Consensus 168 i~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~ 247 (394)
+++++.++|+..+.+++|||||+.+|+.|. ++.+ ..++...+|++||||||||+++.|......++|+ ||+.
T Consensus 209 ~~~~~~~~g~~~~~~~~GHGIG~~~he~p~-~~~~---~~~~~~~~L~~GMV~TIEPgiy~~~~~~~~~~D~-wt~~--- 280 (337)
T 4fuk_A 209 IEACASQYQCSVVRTYTGHGVGHLFHTSPT-VCHY---ANNKSLGMMRPGHVFTIEPMINLGTWQDVTWPDK-WTST--- 280 (337)
T ss_dssp HHHHHHTTTCEECSSEEEEECSSSSSEEEE-ECCS---CC---CCBCCTTCEEEECCEEESSCSCEEECTTS-SCEE---
T ss_pred HHHHHHHhcCCcccCcccCCCCCccccCCc-cccc---ccCCCCCEeCCCCEEEECCeeEcCCCcceEcCCC-CeEE---
Confidence 999999999999999999999999999983 3322 2334667999999999999999998887777887 7776
Q ss_pred cccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCce
Q 016129 248 VDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSD 327 (394)
Q Consensus 248 ~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~ 327 (394)
++||.+.+|||||||||++|++
T Consensus 281 ----------------------------------------------------------t~dg~~gvriEd~VlVTe~G~E 302 (337)
T 4fuk_A 281 ----------------------------------------------------------TKDGRRSAQFEHTMVVTNGGVE 302 (337)
T ss_dssp ----------------------------------------------------------ETTCCCEEECBEEEEECSSSEE
T ss_pred ----------------------------------------------------------ecCCceEEEeccEEEEcCCcCE
Confidence 5789999999999999999999
Q ss_pred eecCCCC
Q 016129 328 RITSHTL 334 (394)
Q Consensus 328 ~lT~~~~ 334 (394)
+||..|.
T Consensus 303 vLT~~p~ 309 (337)
T 4fuk_A 303 IFTDWVD 309 (337)
T ss_dssp ESSCCSS
T ss_pred ECCCCCC
Confidence 9998765
No 11
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=100.00 E-value=1.7e-51 Score=390.93 Aligned_cols=253 Identities=21% Similarity=0.353 Sum_probs=221.5
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH-HHHhhcccchhhhhccccCcccceeecCCCcc
Q 016129 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSF-IREQTGNMYKNVKKKIERGVAFPSCVSVNNTL 88 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~-i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~ 88 (394)
||.|||++||++||+|+++++++++.+.+.++||+|+.||++.++.+ +.++|+..-. .++.++++.+|+|.|+.+
T Consensus 1 m~~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~~g~~~~~----~~~~~f~~iv~~g~n~~~ 76 (263)
T 2gg2_A 1 AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSAC----LGYHGYPKSVCISINEVV 76 (263)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHGGGCSTTCBHHHHHHHHHHHHHHTSCCEESS----TTGGGCCSSSEEEETTEE
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHhCCcccc----ccccCCCcceEecccccc
Confidence 57899999999999999999999999999999999999999999999 7777653210 022344444777999999
Q ss_pred cCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHH
Q 016129 89 CHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTEAI 168 (394)
Q Consensus 89 ~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai 168 (394)
+||.|+ ++++|++||+|+||+|++|+||++|++|||++|+ ++++++++|+++++|++++++++|||++++||++++
T Consensus 77 ~H~~p~--~~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~ 152 (263)
T 2gg2_A 77 CHGIPD--DAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGK--PTIMGERLCRITQESLYLALRMVKPGINLREIGAAI 152 (263)
T ss_dssp ECCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHH
T ss_pred cCCCCC--CCcCcCCCCEEEEEEEEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 999997 2389999999999999999999999999999997 899999999999999999999999999999999999
Q ss_pred HHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEeccc
Q 016129 169 QKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAV 248 (394)
Q Consensus 169 ~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~ 248 (394)
+++++++||..+.+++|||||+++||.| .+++.. .++.+.+|++||||+|||+++.|.+.++..+++ |+++
T Consensus 153 ~~~~~~~G~~~~~~~~GHgiG~~~he~p-~i~~~~---~~~~~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~-~~~~---- 223 (263)
T 2gg2_A 153 QKFVEAEGFSVVREYCGHGIGRGFHEEP-QVLHYD---SRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDG-WTVK---- 223 (263)
T ss_dssp HHHHHHTTCEECSSCCEEECSSSSSEEE-EECSSC---CTTCCCBCCTTCEEEECCEEESSCSCEEECTTS-SCEE----
T ss_pred HHHHHHcCCEECCCcccccCCcceecCC-cccCcc---CCCCCCCcCCCCEEEEecEEEcCCCceEEcCCC-ceEE----
Confidence 9999999998888999999999999998 554432 234568999999999999999888887766664 6766
Q ss_pred ccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCcee
Q 016129 249 DKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDR 328 (394)
Q Consensus 249 ~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~ 328 (394)
+++|.+++||||||+||++|+++
T Consensus 224 ---------------------------------------------------------~~~g~~g~riEdtvlVt~~G~e~ 246 (263)
T 2gg2_A 224 ---------------------------------------------------------TKDRSLSAQYEHTIVVTDNGCEI 246 (263)
T ss_dssp ---------------------------------------------------------ETTCCCEEECBEEEEEETTEEEE
T ss_pred ---------------------------------------------------------ecCCCeEEEEEEEEEECCCccEE
Confidence 57889999999999999999999
Q ss_pred ecCCCCcc
Q 016129 329 ITSHTLQE 336 (394)
Q Consensus 329 lT~~~~~~ 336 (394)
||..|.++
T Consensus 247 LT~~p~~l 254 (263)
T 2gg2_A 247 LTLRKDDT 254 (263)
T ss_dssp SSCCTTCC
T ss_pred eCCCCccc
Confidence 99887643
No 12
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=100.00 E-value=4e-51 Score=385.92 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=219.1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCC
Q 016129 13 LTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHF 91 (394)
Q Consensus 13 vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~ 91 (394)
|||++||+.||+|++|++++++.+.+.++||+|+.||++.++.++.+.|+.. |.. +.+++..+|.|.|..++||
T Consensus 3 iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~~-----~~~f~~~v~~g~n~~~~H~ 77 (252)
T 1qxy_A 3 VKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIH-----DENFPGQTCISVNEEVAHG 77 (252)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCEEHHHH-----HHCCSSSSEEEETTEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcHHHHHHHHHHHHHHcCCcccccc-----cCCCCcceEEcCCccccCC
Confidence 9999999999999999999999999999999999999999999999988753 221 1133333777999999999
Q ss_pred CCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCH-HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHH
Q 016129 92 SPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTG-RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQK 170 (394)
Q Consensus 92 ~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~-~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~ 170 (394)
.|+ +++|++||+|+||+|++|+||++|++|||++|+ +++ +++++|++++++++++++++|||++++||++++++
T Consensus 78 ~p~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~--~~~~~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~ 152 (252)
T 1qxy_A 78 IPS---KRVIREGDLVNIDVSALKNGYYADTGISFVVGE--SDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHN 152 (252)
T ss_dssp CCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSC--CSCTHHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHH
T ss_pred CCC---CcCcCCCCEEEEEeeEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 997 789999999999999999999999999999996 789 99999999999999999999999999999999999
Q ss_pred HHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEeccccc
Q 016129 171 VAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKRAVDK 250 (394)
Q Consensus 171 ~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~~~~~ 250 (394)
+++++||..+.+++|||||+.+||.|..++++. .++.+.+|++||||+|||+++.|.+.++.+.++ ||+.
T Consensus 153 ~~~~~g~~~~~~~~GHgiG~~~he~p~~i~~~~---~~~~~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~-~~~~------ 222 (252)
T 1qxy_A 153 TARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYF---DPKDKTLLTEGMVLAIEPFISSNASFVTEGKNE-WAFE------ 222 (252)
T ss_dssp HHHHTTCEECTTCCEEECSSSSSEEEEEECSSC---CTTCCCBCCTTBEEEECCEEESSCSSCEECSSS-SCEE------
T ss_pred HHHHcCCEecCCccccccCcccccCCccccCCC---CCCCCCCccCCCEEEEecEEEcCCCceEecCCC-ceEE------
Confidence 999999998889999999999999995554432 234568999999999999999999998877775 7775
Q ss_pred ccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCceeec
Q 016129 251 NYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGSDRIT 330 (394)
Q Consensus 251 ~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~~~lT 330 (394)
+++|.+++||||||+||++| ++||
T Consensus 223 -------------------------------------------------------~~~g~~g~riEdtvlVt~~G-e~Lt 246 (252)
T 1qxy_A 223 -------------------------------------------------------TSDKSFVAQIEHTVIVTKDG-PILT 246 (252)
T ss_dssp -------------------------------------------------------CTTCCCEEEEEEEEECCTTC-CEET
T ss_pred -------------------------------------------------------ecCCCcEEEEEEEEEECCCc-eEcc
Confidence 57889999999999999999 9999
Q ss_pred CCCC
Q 016129 331 SHTL 334 (394)
Q Consensus 331 ~~~~ 334 (394)
..|.
T Consensus 247 ~~p~ 250 (252)
T 1qxy_A 247 TKIE 250 (252)
T ss_dssp TCC-
T ss_pred CCCC
Confidence 8774
No 13
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=100.00 E-value=4e-50 Score=386.13 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=222.0
Q ss_pred HHH--hcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccc--eeec
Q 016129 9 KEL--DLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFP--SCVS 83 (394)
Q Consensus 9 ~~~--~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp--~~vs 83 (394)
+.| .|||++||++||+|++|+++++..+++.++||+||.||++.++.++.+.|+.. |.+ + .+|| +|+|
T Consensus 28 ~~R~~~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~-----~--~~f~~iv~~g 100 (286)
T 3tav_A 28 RKKTVEQRTPGELDAMAAAGSIVGAALVAVRDAAKAGVSTLELDQVAESVIREAGAVPSFLG-----Y--HGFPASICSS 100 (286)
T ss_dssp SCSBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETTTT-----G--GGCCSSEEEE
T ss_pred HhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcccccc-----c--CCCCCceEEe
Confidence 355 99999999999999999999999999999999999999999999999988753 221 1 3577 4568
Q ss_pred CCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhH
Q 016129 84 VNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKD 163 (394)
Q Consensus 84 ~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~d 163 (394)
.|+.++||.|+ ++++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||++++|
T Consensus 101 ~n~~~~H~~p~--~~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~~ 176 (286)
T 3tav_A 101 VNDQVVHGIPS--ATAVLADGDLVSIDCGAILDGWHGDSAWTFAVGT--VIPSDEALSEATRLSMEAGIAAMIPGNRLTD 176 (286)
T ss_dssp ETTBCSCCCCC--TTCBCCTTCEEEEEEEEEETTEEEEEEEEEESSS--CCHHHHHHHHHHHHHHHHHHHTCCTTCBHHH
T ss_pred cCccccCCCCC--CCcccCCCCEEEEEEEEEECCEEEeeEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 99999999985 3689999999999999999999999999999996 8999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHC--CCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccC
Q 016129 164 VTEAIQKVA----AAH--DCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLD 237 (394)
Q Consensus 164 V~~ai~~~~----~~~--G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~ 237 (394)
|++++++++ +++ ||..+.+++|||||+.+||.| .|+++. .++.+.+|++||||+|||+++.+.+.++..+
T Consensus 177 i~~~~~~~~~~~~~~~~~g~~~~~~~~GHgiG~~~hE~P-~i~~~~---~~~~~~~L~~GmV~tiEPgiy~~~~~~~~~~ 252 (286)
T 3tav_A 177 VSHAIELGTRAAEKQFDRAFGIVDGYGGHGIGRSMHLDP-FLPNEG---APGKGPLLAVGSVLAIEPMLTLGTTQTRVLA 252 (286)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEECTTCCEEECSSSSSEEE-EECSSC---CSSCSSBCCTTBEEEECCEEESSCSCEEECT
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCcccCcccccccCCc-cccCcC---CCCCCCCcCCCCEEEEcCEEEcCCCceEecC
Confidence 999999999 999 998888999999999999999 565432 2235689999999999999999888887777
Q ss_pred CCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEE
Q 016129 238 EKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKF 317 (394)
Q Consensus 238 ~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~ 317 (394)
|+ ||+. +++|.+.+||||
T Consensus 253 ~~-w~~~-------------------------------------------------------------t~dg~~gvriEd 270 (286)
T 3tav_A 253 DD-WTVV-------------------------------------------------------------TTDGSRAAHWEH 270 (286)
T ss_dssp TS-SCEE-------------------------------------------------------------ETTCCCEEECBE
T ss_pred CC-ceEE-------------------------------------------------------------ecCCCcEEEeee
Confidence 76 7765 578999999999
Q ss_pred EEEEcCCCceeecCCC
Q 016129 318 TVLLMPNGSDRITSHT 333 (394)
Q Consensus 318 Tvlvt~~G~~~lT~~~ 333 (394)
||+||++|+++||..|
T Consensus 271 ~v~Vt~~G~e~LT~~p 286 (286)
T 3tav_A 271 TVAVTEAGPRILTMRP 286 (286)
T ss_dssp EEECCTTSCEESSCCC
T ss_pred EEEECCCcceeCCCCC
Confidence 9999999999999875
No 14
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=100.00 E-value=1.2e-49 Score=392.38 Aligned_cols=248 Identities=20% Similarity=0.314 Sum_probs=220.3
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCCc
Q 016129 10 ELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNNT 87 (394)
Q Consensus 10 ~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~~ 87 (394)
++.|||++||++||+|++|++++++.+++.++||+||.||++.+++++.++|+.. .. ..+.+|| +|+|.|++
T Consensus 100 ~~~IKs~~EIe~mR~A~~ia~~al~~~~~~ikpGvTE~El~~~~~~~~~~~Ga~p--s~----l~y~~Fp~iv~sg~N~~ 173 (368)
T 3s6b_A 100 DIYVNNEEEIQRIREACILGRKTLDYAHTLVSPGVTTDEIDRKVHEFIIKNNAYP--ST----LNYYKFPKSCCTSVNEI 173 (368)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEE--TT----TTGGGCCSSEEEEETTE
T ss_pred CceeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcc--cc----ccccCCCCeEEEcCccc
Confidence 5799999999999999999999999999999999999999999999999988742 10 0134577 56689999
Q ss_pred ccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeC---CCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHH
Q 016129 88 LCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQ---DGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDV 164 (394)
Q Consensus 88 ~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG---~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV 164 (394)
++||+|+ +++|++||+|+||+|++|+||++|++|||+|| + ++++++++|+++++|++++++++|||++++||
T Consensus 174 i~H~~p~---~r~L~~GDiV~iD~G~~~~GY~sDitRT~~vGg~~~--~s~e~~~ly~~v~ea~~aai~~ikPG~~~~dI 248 (368)
T 3s6b_A 174 VCHGIPD---YRPLKSGDIINIDISVFYKGVHSDLNETYFVGDIND--VPKEGKELVETCYFSLMEAIKKCKPGMFYKNI 248 (368)
T ss_dssp EECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSCGGG--SCHHHHHHHHHHHHHHHHHHHHCCTTCBTHHH
T ss_pred cccCCCC---CccccCCCEEEEEEeEEECcEEEEEEEEEEECCCCC--CCHHHHHHHHHHHHHHHHHHHHccCCCcHHHH
Confidence 9999997 78999999999999999999999999999999 6 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEE
Q 016129 165 TEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIY 244 (394)
Q Consensus 165 ~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~ 244 (394)
+++++++++++||..+.+++|||||+.+||.| .|+++.. ++.+.+|++||||+|||+++.|.......+|+ ||+.
T Consensus 249 ~~aa~~~i~~~G~~~~~~~~GHGIG~~vHE~P-~i~~~~~---~~~~~~L~~GMVfTIEPgiy~~~~~~~~~~d~-wt~~ 323 (368)
T 3s6b_A 249 GTLIDAYVSKKNFSVVRSYSGHGVGKLFHSNP-TVPHFKK---NKAVGIMKPGHVFTIEPMINQGHYSDVLWPDQ-WTSA 323 (368)
T ss_dssp HHHHHHHHHTTTCEECCSCCEEECSSSSSEEE-EECSSSS---CCCCCBCCTTCEEEECCEEESSCSCEEECTTS-SCEE
T ss_pred HHHHHHHHHHcCCCcccceeeCCCCccccCCC-ccccccC---CCCCCEECCCCEEEEcCeEEcCcccccccCCC-ceeE
Confidence 99999999999999888999999999999998 5654322 12457899999999999999887766666776 6654
Q ss_pred ecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCC
Q 016129 245 KRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPN 324 (394)
Q Consensus 245 ~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~ 324 (394)
+.+|.+.+||||||+||++
T Consensus 324 -------------------------------------------------------------t~dG~~gvriEdtVlVTe~ 342 (368)
T 3s6b_A 324 -------------------------------------------------------------TSDGKLSAQFEHTLLITNN 342 (368)
T ss_dssp -------------------------------------------------------------ETTCCCEEECBEEEEEETT
T ss_pred -------------------------------------------------------------eeCCccEEEEeEEEEEcCC
Confidence 5789999999999999999
Q ss_pred CceeecCCCC
Q 016129 325 GSDRITSHTL 334 (394)
Q Consensus 325 G~~~lT~~~~ 334 (394)
|+++||...+
T Consensus 343 G~EvLT~~~p 352 (368)
T 3s6b_A 343 GVEILTKRTQ 352 (368)
T ss_dssp EEEETTCCCT
T ss_pred cCeECCCCCC
Confidence 9999997554
No 15
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=100.00 E-value=1.8e-49 Score=381.42 Aligned_cols=246 Identities=23% Similarity=0.337 Sum_probs=218.7
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCCC
Q 016129 9 KELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVNN 86 (394)
Q Consensus 9 ~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n~ 86 (394)
++|.|||++||++||+|++|+++++..+++.++||+||.||++.++.++.++|+.... .++ .+|| +|+|.|+
T Consensus 37 ~~R~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~~~~~----~~~--~~f~~iv~~g~n~ 110 (285)
T 3pka_A 37 SEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPST----LGY--KGFPKSCCTSLNE 110 (285)
T ss_dssp CSCSBCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETT----TTG--GGCCSSSEEEETT
T ss_pred cceecCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCcccc----ccc--cCCCCceEecccc
Confidence 4789999999999999999999999999999999999999999999999998874210 011 2355 6668999
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHHH
Q 016129 87 TLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVTE 166 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ 166 (394)
.++||.|+ +++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||++++||++
T Consensus 111 ~~~H~~p~---~~~l~~Gd~v~iD~G~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~ 185 (285)
T 3pka_A 111 VICHGIPD---STVITDGDIVNIDVTAYIGGVHGDTNATFPAGD--VADEHRLLVDRTREATMRAINTVKPGRALSVIGR 185 (285)
T ss_dssp EEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHHTCCTTSBTTHHHH
T ss_pred eeecCCCC---CcccCCCCEEEEEEEEEECCEEEEEEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 99999997 789999999999999999999999999999996 8999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEec
Q 016129 167 AIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYKR 246 (394)
Q Consensus 167 ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~~ 246 (394)
+++++++++||..+.+++|||||+.+||.| .|+++ ..++.+.+|++||||+|||+++.+...++.++++ |++.
T Consensus 186 ~~~~~~~~~G~~~~~~~~GHgiG~~~hE~P-~i~~~---~~~~~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~g-w~~~-- 258 (285)
T 3pka_A 186 VIESYANRFGYNVVRDFTGHGIGTTFHNGL-VVLHY---DQPAVETIMQPGMTFTIEPMINLGALDYEIWDDG-WTVV-- 258 (285)
T ss_dssp HHHHHHHTTTCEECCSSCEEBCSSSSSCSC-EECSS---CCTTCCCBCCTTBEEEECCEEESSCSCEEECTTS-CCEE--
T ss_pred HHHHHHHHcCCccCCCcccccCCCcccCCC-cccCc---cCCCCCCccCCCCEEEEcCEEEcCCCceeecCCC-ceEE--
Confidence 999999999999888999999999999999 56533 2234678999999999999999887777666676 6654
Q ss_pred ccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCCc
Q 016129 247 AVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNGS 326 (394)
Q Consensus 247 ~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G~ 326 (394)
+++|.+.+|+||||+||++|+
T Consensus 259 -----------------------------------------------------------~~~g~~gvriEdtv~Vt~~G~ 279 (285)
T 3pka_A 259 -----------------------------------------------------------TKDRKWTAQFEHTLLVTDTGV 279 (285)
T ss_dssp -----------------------------------------------------------ETTCCCEEECBEEEEECSSSE
T ss_pred -----------------------------------------------------------ecCCCcEEEEeeEEEECCCcC
Confidence 468999999999999999999
Q ss_pred eeecC
Q 016129 327 DRITS 331 (394)
Q Consensus 327 ~~lT~ 331 (394)
++||.
T Consensus 280 e~LT~ 284 (285)
T 3pka_A 280 EILTC 284 (285)
T ss_dssp EESSC
T ss_pred eECCC
Confidence 99995
No 16
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=100.00 E-value=2.5e-49 Score=386.70 Aligned_cols=246 Identities=20% Similarity=0.306 Sum_probs=218.1
Q ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccc--eeecCC
Q 016129 9 KELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFP--SCVSVN 85 (394)
Q Consensus 9 ~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp--~~vs~n 85 (394)
.++.|||++||+.||+|++|++++++.+++.++||+||.||++.+++++.++|+.. +. + ..+|| +|.|.|
T Consensus 71 ~~~~iKs~~EI~~mR~A~~ia~~al~~~~~~i~pGvte~el~~~~~~~~~~~G~~~~~~-----~--y~~fp~iv~sg~n 143 (329)
T 2b3h_A 71 SQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPL-----N--YYNFPKSCCTSVN 143 (329)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEETTT-----T--GGGCCSSSEEEET
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHcCCccccc-----c--ccCCCCeEEecCC
Confidence 36789999999999999999999999999999999999999999999999987642 11 1 23476 566999
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
++++||+|+ +++|++||+|+||+|++|+||++|++|||+||+ ++++++++|+++++|++++++++|||++++||+
T Consensus 144 ~~~~H~~p~---~~~L~~GDiv~iD~G~~~~GY~sD~tRT~~vG~--~~~~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~ 218 (329)
T 2b3h_A 144 EVICHGIPD---RRPLQEGDIVNVDITLYRNGYHGDLNETFFVGE--VDDGARKLVQTTYECLMQAIDAVKPGVRYRELG 218 (329)
T ss_dssp TEEECCCCC---SCBCCTTCEEEEEEEEEETTEEEEEEEEEECSS--CCHHHHHHHHHHHHHHHHHHHTCCTTCBTTHHH
T ss_pred CCcCCCCCC---CcCCCCCCEEEEEeeEEECCEEEeeEEEEEeCC--CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Confidence 999999997 789999999999999999999999999999997 799999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEEe
Q 016129 166 EAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIYK 245 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~~ 245 (394)
++++++++++||..+.+++|||||+.+||.| .++++... ..+.+|++||||+|||+++.|.+.....+++ ||+.
T Consensus 219 ~~~~~~~~~~G~~~~~~~~GHGIG~~~HE~P-~i~~~~~~---~~~~~L~~GMVftIEPgiy~~~~~~~~~~d~-w~~~- 292 (329)
T 2b3h_A 219 NIIQKHAQANGFSVVRSYCGHGIHKLFHTAP-NVPHYAKN---KAVGVMKSGHVFTIEPMICEGGWQDETWPDG-WTAV- 292 (329)
T ss_dssp HHHHHHHHHTTCEECCSCCEEECSSSSSEEE-EECCSSSC---CCCCBCCTTCEEEECCEEESSCCCEEECTTS-CCEE-
T ss_pred HHHHHHHHHcCCCccCCcccCCcCcccccCC-cccccccC---CCCCEECCCCEEEEeCCcCcCcccccccCCC-ceeE-
Confidence 9999999999999889999999999999998 56543321 1347899999999999999887766555565 5554
Q ss_pred cccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCCC
Q 016129 246 RAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPNG 325 (394)
Q Consensus 246 ~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~G 325 (394)
+.+|.+++||||||+||++|
T Consensus 293 ------------------------------------------------------------~~~G~~g~riEdtvlVTe~G 312 (329)
T 2b3h_A 293 ------------------------------------------------------------TRDGKRSAQFEHTLLVTDTG 312 (329)
T ss_dssp ------------------------------------------------------------ETTCCCEEECBEEEEECSSS
T ss_pred ------------------------------------------------------------eeCCeEEEEEeeEEEEcCCe
Confidence 57899999999999999999
Q ss_pred ceeecCC
Q 016129 326 SDRITSH 332 (394)
Q Consensus 326 ~~~lT~~ 332 (394)
+++||..
T Consensus 313 ~evLT~~ 319 (329)
T 2b3h_A 313 CEILTRR 319 (329)
T ss_dssp EEETTCC
T ss_pred eEECCCC
Confidence 9999975
No 17
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=1.7e-44 Score=356.88 Aligned_cols=196 Identities=17% Similarity=0.241 Sum_probs=179.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.+||++||+.||+|+++++.++..+++.++||+||.||++.++..+.+.|+ .+.+||+++ |.|
T Consensus 125 ~~~R~iK~~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~te~e~~~~~~~~~~~~g~-----------~~~~f~~iv~~g~n 193 (356)
T 3q6d_A 125 EKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGA-----------TSSSFDIIVASGLR 193 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTTCCTTCBHHHHHHHHHHHHHHTTC-----------SEESSCCEEEEGGG
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCC-----------CcCCCCCEEEEcCc
Confidence 5789999999999999999999999999999999999999999999999887754 356788655 799
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 194 ~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 268 (356)
T 3q6d_A 194 SALPHGVAS---EKVIETGDFVTLDFGAYYKGYCSDITRTIAVGE--PSDKLKEIYNIVLEAQLRGVNGIKAGLTGREAD 268 (356)
T ss_dssp GGCTTCBCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred cccCCCCCC---CcccCCCCEEEEEEeEEECCEEeeeEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 999999997 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCccc-cCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016129 166 EAIQKVAAAHDCKIV-EGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~-~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
.+++++++++||... .+.+|||||+.+||.| .+. + +.+.+|++||||+|||+++
T Consensus 269 ~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p-~i~--~-----~~~~~l~~Gmv~tiEPgiy 323 (356)
T 3q6d_A 269 ALTRDYITEKGYGEYFGHSTGHGIGLEIHEAP-GLA--F-----RSDTVLEPGMAVTVEPGIY 323 (356)
T ss_dssp HHHHHHHHHTTCGGGCCSCSEEECSSSSSEEE-EES--T-----TCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHcCCcccCCCCCcccCCCCcCcCC-CCC--C-----CCCCCcCCCCEEEECCEEE
Confidence 999999999999743 5779999999999998 442 1 2457999999999999876
No 18
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=100.00 E-value=4.2e-44 Score=354.26 Aligned_cols=196 Identities=20% Similarity=0.289 Sum_probs=178.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
+++|.|||++||+.||+|+++++.++..+++.++||+||.||++.++..+.+.|+ .+.+||+++ |.|
T Consensus 128 ~~lr~iK~~~Ei~~~r~a~~~~~~~~~~~~~~~~~G~te~e~~~~~~~~~~~~g~-----------~~~~f~~iv~~g~~ 196 (359)
T 2zsg_A 128 KQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGA-----------EGVAFDTIVASGCR 196 (359)
T ss_dssp HHHHHBCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHHHTTC-----------SEESSCCEEEEGGG
T ss_pred hhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC-----------CCCCCCCEEEEccc
Confidence 6789999999999999999999999999999999999999999999999888754 346787554 799
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 197 ~~~~h~~~~---~~~l~~gd~v~iD~g~~~~gy~~D~tRt~~~G~--~~~~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~ 271 (359)
T 2zsg_A 197 SALPHGKAS---DKVVERGDVIVIDFGATYENYCADITRVVSIGE--PSDEVKEVHSIVLEAQERALKIAKAGVTGKLLD 271 (359)
T ss_dssp GGSTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSS--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred cccccCCCC---CcccCCCCEEEEEEeEEECCEEEeeeEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHH
Confidence 999999997 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016129 166 EAIQKVAAAHDCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 166 ~ai~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
.+++++++++||.. ..+.+|||+|+.+||.| .|.. +.+.+|++||||+|||+++
T Consensus 272 ~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p-~i~~-------~~~~~l~~gmv~tiEPgiy 326 (359)
T 2zsg_A 272 SVAREFIREKGYGEFFGHSLGHGIGLEVHEGP-AISF-------RNDSPLPENVVFTVEPGIY 326 (359)
T ss_dssp HHHHHHHHHTTCGGGBCSCSEEECSSSSSEEE-EEST-------TCCCBCCTTBEEEECCEEE
T ss_pred HHHHHHHHHcCCcccCCCCCccccCcccCCCC-CcCC-------CCCCCcCCCCEEEECCEEE
Confidence 99999999999963 45788999999999998 5531 1457999999999999976
No 19
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=100.00 E-value=1.4e-43 Score=349.86 Aligned_cols=196 Identities=18% Similarity=0.231 Sum_probs=179.3
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.+||++||+.||+|++++++++..+.+.++||+||.||++.++..+.+.|+ .+.+||+++ |.|
T Consensus 122 ~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~-----------~~~~f~~iv~~g~n 190 (351)
T 1wy2_A 122 RDMRIIKSEKEIKIIEKACEIADKAVMAAIEEITEGKKEREVAAKVEYLMKMNGA-----------EKPAFDTIIASGYR 190 (351)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTC-----------SEESSCCEEEEGGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-----------CCCCCCCEEEEccc
Confidence 6789999999999999999999999999999999999999999999999887754 356788655 699
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|++|+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 191 ~~~~H~~~~---~~~l~~gd~v~iD~G~~~~gy~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~ 265 (351)
T 1wy2_A 191 SALPHGVAS---DKRIERGDLVVIDLGALYQHYNSDITRTIVVGS--PNEKQKEIYEIVLEAQKKAVESAKPGITAKELD 265 (351)
T ss_dssp GGSTTCBCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred cccccCCCC---CcccCCCCEEEEEEEEEECCEEecceEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 999999997 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016129 166 EAIQKVAAAHDCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 166 ~ai~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
.+++++++++||.. ..+.+|||||+.+||.| .|. + +.+.+|++||||+|||+++
T Consensus 266 ~~~~~~~~~~g~~~~~~h~~GHgiGl~~hE~p-~i~--~-----~~~~~l~~Gmv~tiEPgiy 320 (351)
T 1wy2_A 266 SIARNIIAEYGYGEYFNHSLGHGVGLEVHEWP-RVS--Q-----YDETVLREGMVITIEPGIY 320 (351)
T ss_dssp HHHHHHHHHTTCGGGCCSCSEEECSSSSSEEE-EES--T-----TCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHcCCcccCCCCcccccCCCcCCCC-ccC--C-----CCCCCcCCCCEEEECCEEE
Confidence 99999999999874 36789999999999988 542 1 2457999999999999986
No 20
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=100.00 E-value=1.5e-43 Score=352.94 Aligned_cols=227 Identities=18% Similarity=0.190 Sum_probs=203.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee-cCCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV-SVNN 86 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v-s~n~ 86 (394)
.+.|.+||++||+.||+|+++++.++..+.+.++||+||.||++.++.++.+.|+ .+.+|++|. +.|.
T Consensus 145 ~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~-----------~~~~f~iv~sG~n~ 213 (378)
T 4ege_A 145 RQLRMVKEAAEVDALAKAGAAIDRVHARVPAFLVPGRTEAQVAADIAEAIVAEGH-----------SAVAFVIVGSGPHG 213 (378)
T ss_dssp HHHHTBCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTC-----------SEEEEEEEEEGGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC-----------CCCCeeEEEeeCCC
Confidence 5789999999999999999999999999999999999999999999999988764 245675444 5899
Q ss_pred cccCCCCCCCCCccccCCCEEEEEeeeEE-CceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 87 TLCHFSPLASDETVLQEGDMIKIDLGCHI-DGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 87 ~~~H~~P~~~~~~~L~~GDvV~iDlG~~~-dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..+||.|+ +++|++||+|+||+|++| +||++|++|||++|+ ++++++++|++++++++++++++|||++++||+
T Consensus 214 ~~~H~~~~---~~~l~~Gd~v~iD~G~~~~~GY~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~ 288 (378)
T 4ege_A 214 ADPHHGYS---DRKLQVGDIVVVDIGGTYEPGYYSDSTRTYSIGD--PSPDVAQQYSALQRAQRAAVDAVRPGVTAAQVD 288 (378)
T ss_dssp GCTTCCCC---SCBCCTTCEEEEEEEEEETTTEECCEEEEEEESC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred CccCCCCC---CCCcCCCCEEEEEEEEEECCeEEEccEEEEEeCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 99999997 789999999999999999 999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEE
Q 016129 166 EAIQKVAAAHDCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIY 244 (394)
Q Consensus 166 ~ai~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~ 244 (394)
++++++++++||.. ..+.+|||||+.+||.| .+. + +.+.+|++||||+|||+++.
T Consensus 289 ~~~~~~~~~~G~~~~~~h~~GHgiGl~~hE~P-~i~--~-----~~~~~L~~Gmv~tiEPgiy~---------------- 344 (378)
T 4ege_A 289 AAARDVLADAGLAEYFVHRTGHGIGLCVHEEP-YIV--A-----GNELPLVAGMAFSIEPGIYF---------------- 344 (378)
T ss_dssp HHHHHHHHHTTCGGGCCSCSEEECSSSSSEEE-EEC--T-----TCCCBCCTTBEEEECCEEEE----------------
T ss_pred HHHHHHHHHcCCCCcCCCCCcccCCCCcCCCC-ccC--C-----CCCCccCCCCEEEECCEEEe----------------
Confidence 99999999999974 46789999999999998 442 1 24679999999999999861
Q ss_pred ecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCC
Q 016129 245 KRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPN 324 (394)
Q Consensus 245 ~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~ 324 (394)
+|.+.+++|+||+||++
T Consensus 345 ---------------------------------------------------------------~g~~gvriEd~v~Vt~~ 361 (378)
T 4ege_A 345 ---------------------------------------------------------------PGRWGARIEDIVVVTEN 361 (378)
T ss_dssp ---------------------------------------------------------------TTTEEEECBEEEEEETT
T ss_pred ---------------------------------------------------------------CCccEEEEeeEEEEeCC
Confidence 24456899999999999
Q ss_pred CceeecCCCCccc
Q 016129 325 GSDRITSHTLQEI 337 (394)
Q Consensus 325 G~~~lT~~~~~~~ 337 (394)
|+++||..|.+++
T Consensus 362 G~e~Lt~~p~~l~ 374 (378)
T 4ege_A 362 GALSVNNRPHELM 374 (378)
T ss_dssp EEEESCCSCCSCE
T ss_pred cCeECCCCCCccE
Confidence 9999999887543
No 21
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=100.00 E-value=1.1e-43 Score=351.39 Aligned_cols=195 Identities=23% Similarity=0.273 Sum_probs=177.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.+||++||+.||+|+++++.++..+++.++||+||.||++.++..+.+. + .+.+||+++ |.|
T Consensus 126 ~~~R~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~-~-----------~~~~f~~iv~~g~n 193 (356)
T 1wn1_A 126 KELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIREL-S-----------DGIAFEPIVASGEN 193 (356)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHHH-S-----------SEESSCCEEEEGGG
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHh-C-----------cCCCCCcEEEEecc
Confidence 67899999999999999999999999999999999999999999999988876 3 245687555 799
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|++|+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 194 ~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~vG~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 268 (356)
T 1wn1_A 194 AANPHHEPG---ERKIRKGDIIILDYGARWKGYCSDITRTIGLGE--LDERLVKIYEVVKDAQESAFKAVREGIKAKDVD 268 (356)
T ss_dssp GGCTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSS--CCHHHHHHHHHHHHHHHHHHHHCBTTSBHHHHH
T ss_pred cccccCCCC---CCeecCCCEEEEEEEEEECCEEeccEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 999999996 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016129 166 EAIQKVAAAHDCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 166 ~ai~~~~~~~G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
.+++++++++||.. ..+.+|||||+.+||.| .+. + +.+.+|++||||+|||+++
T Consensus 269 ~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p-~i~--~-----~~~~~l~~Gmv~tiEPgiy 323 (356)
T 1wn1_A 269 SRAREVISKAGYGEYFIHRTGHGLGLDVHEEP-YIG--P-----DGEVILKNGMTFTIEPGIY 323 (356)
T ss_dssp HHHHHHHHTTTCGGGCCSCSEEECSSSSSEEE-EES--T-----TCCCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHcCCcccCCCCCcccCCCccCCCc-ccC--C-----CCCCCcCCCCEEEECCeeE
Confidence 99999999999973 46789999999999998 442 1 2457999999999999986
No 22
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=100.00 E-value=3.3e-43 Score=350.30 Aligned_cols=228 Identities=18% Similarity=0.210 Sum_probs=203.3
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|+|||++||+.||+|++|+++++..+++.++||+||.||++.++..+.+++ +..+++|++++ |.|
T Consensus 145 ~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~~G~tE~el~~~~~~~~~~~~----------g~~~~~f~~iv~~G~n 214 (377)
T 4fkc_A 145 SELREIKDKDEIKAHKKAAEIVDKVFYRFIEGKLEGKSERELANRIEYMIKNEF----------GADDVSFEPIVASGPN 214 (377)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHTTSCCTTCBHHHHHHHHHHHHHTST----------TCCEESSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHhhhhccCCCccHHHHHHHHhhhhhhcc----------CCCCcccCcccccccc
Confidence 568999999999999999999999999999999999999999999888776542 23456788655 799
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|++|+|++|+||++|++|||++|+ ++++++++|++++++++++++.+|||+++++|+
T Consensus 215 ~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 289 (377)
T 4fkc_A 215 GANPHHRPS---HRKIRKGDVVIFDYGAKYLGYCSDVTRTVVVGP--PSEEVKKVYEIVKEAQETAVQKVAEGIPAEVVD 289 (377)
T ss_dssp GGCTTCCCC---SCBCCTTCEEEEEECEEETTEECCEEEEEESSS--CCTHHHHHHHHHHHHHHHHHHHCBTTCBHHHHH
T ss_pred ccccccccc---cccccccccccccccccccCcccccceeEEEec--CCHHHHHhhhhhHHHHHHHHHhhcCCcchhhhH
Confidence 999999997 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCc-cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCCceEEE
Q 016129 166 EAIQKVAAAHDCK-IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEKQTTIY 244 (394)
Q Consensus 166 ~ai~~~~~~~G~~-~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~~~tv~ 244 (394)
.+++++++++|+. ...+.+|||||+.+||.| .+. + +.+.+|++||||+|||+++.
T Consensus 290 ~~~~~~~~~~g~~~~~~h~~GHgiGl~~hE~P-~i~--~-----~~~~~L~~Gmv~tiEPgiy~---------------- 345 (377)
T 4fkc_A 290 ATARGIISKYGYGEYFIHRTGHGLGIDVHEEP-YIS--P-----GNKKILKDGMVFTIEPGIYL---------------- 345 (377)
T ss_dssp HHHHHHHHHTTCTTTCCSCSEEECSSSSSEEE-EEC--S-----SCCCBCCTTCEEEECCEEEE----------------
T ss_pred HHHHHHHHHhcccccCCCCCeEeCCCccccCC-ccc--C-----CCCCEeCCCCEEEECCeeEE----------------
Confidence 9999999999996 467889999999999998 442 1 25679999999999998751
Q ss_pred ecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEEEEcCC
Q 016129 245 KRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTVLLMPN 324 (394)
Q Consensus 245 ~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tvlvt~~ 324 (394)
+|.+.+++|+||+||++
T Consensus 346 ---------------------------------------------------------------~g~~GvriEd~v~Vt~~ 362 (377)
T 4fkc_A 346 ---------------------------------------------------------------QGKFGVRIEDDVALVDK 362 (377)
T ss_dssp ---------------------------------------------------------------TTTEEEECBEEEEEETT
T ss_pred ---------------------------------------------------------------CCccEEEEccEEEEECC
Confidence 24456899999999999
Q ss_pred CceeecCCCCccc
Q 016129 325 GSDRITSHTLQEI 337 (394)
Q Consensus 325 G~~~lT~~~~~~~ 337 (394)
|+++||..|.+++
T Consensus 363 g~e~Lt~~p~eli 375 (377)
T 4fkc_A 363 KGIRLTNADRELI 375 (377)
T ss_dssp EEEESCCSCCSCC
T ss_pred CcEECCCCCCCeE
Confidence 9999999887554
No 23
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=100.00 E-value=5.9e-42 Score=345.76 Aligned_cols=193 Identities=20% Similarity=0.201 Sum_probs=173.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.|||++||+.||+|++|+++++..+++.++||+||.||++.++..+.++|+ .+.+||+++ |.|
T Consensus 166 ~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~el~~~~~~~~~~~G~-----------~~~~f~~ivasG~n 234 (427)
T 3ig4_A 166 CELRVFKTDEEIEIIKEAIAVTKDGIYNVLKHAKADMMEYELEAQFDFTLKSSGI-----------KHHAFNTILASGKN 234 (427)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEHHHHHHHHHHHHHHTTC-----------CEESSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCC-----------CCCCCCCEEEECcc
Confidence 5789999999999999999999999999999999999999999999999888754 356788655 699
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVL-QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDV 164 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~v-G~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV 164 (394)
.+++||.|+ +++|++||+|+||+|++|+||++|+||||+| |+ ++++++++|++++++++++++++|||++++||
T Consensus 235 ~~~~H~~~~---~~~l~~GdlvliD~G~~~~gY~sDitRT~~v~G~--~s~~~~~~y~~vl~a~~~~i~~~kpG~~~~di 309 (427)
T 3ig4_A 235 ATVLHYEDN---DAQIQNGDLVLLDLGAQKDYYNADISYTFPANGT--FSSRQKQIYNIVLNALKETTEIIKPGLKFAAL 309 (427)
T ss_dssp GGSTTCCCC---CSEECTTCEEEEEECEEETTEECCEEEEEETTSC--CCHHHHHHHHHHHHHHHHHHHTCCTTCBTHHH
T ss_pred ccccccCcc---cccCCCCCEEEEEeeeEECcEEEEEEEEEecCCC--CCHHHHHHHHHHHHHHHHHHHHccCCCcHHHH
Confidence 999999997 7899999999999999999999999999999 65 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHC----CCc--------cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeee
Q 016129 165 TEAIQKVAAAH----DCK--------IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTS 227 (394)
Q Consensus 165 ~~ai~~~~~~~----G~~--------~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is 227 (394)
+.++++++.+. |+. ...+.+||++|+.+||.|. ..+.+|++||||+|||+++
T Consensus 310 ~~~a~~~i~~~~~~~G~~~~~~~~~~~~~Hg~GH~iGl~vhe~~~-----------~~~~~L~~GMV~tiEPgiy 373 (427)
T 3ig4_A 310 NEHAKKVLAEGCKAVGLIQEDEELSKYYYHGVSHFLGLDTHDVGT-----------YKDRVLEEGMVITIEPGLY 373 (427)
T ss_dssp HHHHHHHHHHHHHHHTSCSSGGGGGGTCCSCSCCBCSSSSSCCCC-----------CTTCBCCTTCEEEECCEEE
T ss_pred HHHHHHHHHHhHhhcCCccCcchhhccCCCCCCCcCCcCCCcCCC-----------CCCCEeCCCCEEEECCEEE
Confidence 99999999875 441 2345679999999998662 1457999999999999986
No 24
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.4e-41 Score=341.04 Aligned_cols=209 Identities=12% Similarity=0.116 Sum_probs=180.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccc--eeecCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFP--SCVSVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp--~~vs~n 85 (394)
++.|.+||++||+.||+|+++++.++..+.+.++||+||.||++.++..+.++|+..|.. + ..++++ ++.|.|
T Consensus 152 ~~lR~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~te~el~~~~~~~~~~~g~~~~~~----~-~~~~~~~iv~~g~n 226 (402)
T 1kp0_A 152 MWZRVIKSSEEZBLIRZGARISDIGGAATAAAISAGVPEYEVAIATTBAMVRZIARBFPY----V-ELMDTWIWFQSGIN 226 (402)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHSSS----C-EEEEEEEEEEEGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhcccccCc----c-cccCccceeecccc
Confidence 567999999999999999999999999999999999999999999999999887643321 0 011233 345899
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
..++||.|+ +++|++||+|+||+|++|+||++|++|||++|+ ++++++++|++++++++++++++|||+++++|+
T Consensus 227 ~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~G~--~~~~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~ 301 (402)
T 1kp0_A 227 TDGAHNPVT---BRVVZRGDILSLNCFPMIFGYYTALERTLFLZZ--VBDASLZIWZKNTAVHRRGLZLIKPGARCKDIA 301 (402)
T ss_dssp GGSTTCCEE---CCBCCTTCEEEEEEEEEETTEECCEEEEEEESC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred cccccCCCC---CcccCCCCEEEEEEEeeECCEeeecEEEEEcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 999999997 789999999999999999999999999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCcccc-CccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecC
Q 016129 166 EAIQKVAAAHDCKIVE-GVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTG 229 (394)
Q Consensus 166 ~ai~~~~~~~G~~~~~-~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g 229 (394)
++++++++++||.... +.+|||+|..+||.|..+.... .++.+.+|++||||+|||+++.+
T Consensus 302 ~~~~~~~~~~G~~~~~~~~~GHgiG~~~He~~~~~g~~~---~~~~~~~l~~Gmv~tiEPgiy~~ 363 (402)
T 1kp0_A 302 SELNBMYRZWDLLRYRTFGYGHSFGVLBHYYGREAGVEL---REDIZTVLEPGMVVSMEPMVMBP 363 (402)
T ss_dssp HHHHHHHHHTTCGGGBCSCSCBBCEEEETTEECCTTCBC---CTTCCCBCCTTCEEEECCEEEEC
T ss_pred HHHHHHHHHcCCCeecCCCcccccCCccccCCcccCccc---CCCCCCccCCCcEEEECCceeec
Confidence 9999999999998654 4469999999999874432111 11356799999999999999854
No 25
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=100.00 E-value=3.3e-41 Score=342.46 Aligned_cols=244 Identities=20% Similarity=0.269 Sum_probs=205.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.|||++||+.||+|+++++.++..+++.++||+||.||++.++..+.+.|+ .+.+||+++ |.|
T Consensus 170 ~~~R~iKs~~Ei~~~r~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~G~-----------~~~~f~~iv~~G~n 238 (440)
T 2v3z_A 170 HEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGA-----------RYPSYNTIVGSGEN 238 (440)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTC-----------CEESSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCC-----------CcCCCCCeEEEcCc
Confidence 5789999999999999999999999999999999999999999999888887754 356788655 699
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVL-QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDV 164 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~v-G~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV 164 (394)
..++||.|+ +++|++||+|+||+|++|+||++|+||||++ |+ ++++++++|++++++++++++++|||++++||
T Consensus 239 ~~~~H~~~~---~~~l~~gd~vliD~G~~~~gy~sD~tRT~~v~G~--~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~v 313 (440)
T 2v3z_A 239 GCILHYTEN---ECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGK--FTQAQREIYDIVLESLETSLRLYRPGTSILEV 313 (440)
T ss_dssp GGSTTCCCC---CSBCCTTCEEEEEECEEETTEECCEEEEEETTSC--CCHHHHHHHHHHHHHHHHHHHHCCTTCCHHHH
T ss_pred cccccCCCC---CccccCCCEEEEEeeEEECCEEEeeEEEEEeCCC--CCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 999999997 7899999999999999999999999999999 86 89999999999999999999999999999999
Q ss_pred HHHHHHHHHH----CCC--------------c-cccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEcee
Q 016129 165 TEAIQKVAAA----HDC--------------K-IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIV 225 (394)
Q Consensus 165 ~~ai~~~~~~----~G~--------------~-~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~ 225 (394)
++++++++.+ +|+ . ...|.+|||||+.+||.|... + +.+.+|++||||+|||+
T Consensus 314 ~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~~~Hg~GHgiGl~~he~p~~~---~-----~~~~~L~~Gmv~tiEPg 385 (440)
T 2v3z_A 314 TGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYG---Q-----DRSRILEPGMVLTVAPG 385 (440)
T ss_dssp HHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTTCCSCSCCBCSSSSSCCSCCC---G-----GGCCCCCTTCEEEECCE
T ss_pred HHHHHHHHHhhhhccCcccCchhhhhhhhccccccCCCCCCcCCcccccCCCcC---C-----CCCCccCCCCEEEECCE
Confidence 9999998864 443 2 235668999999999988322 1 13479999999999999
Q ss_pred eecCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeee
Q 016129 226 TSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLH 305 (394)
Q Consensus 226 is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~ 305 (394)
++...... ..+
T Consensus 386 iy~~~~~~--~~~------------------------------------------------------------------- 396 (440)
T 2v3z_A 386 LYIAPDAE--VPE------------------------------------------------------------------- 396 (440)
T ss_dssp EEECTTCS--SCG-------------------------------------------------------------------
T ss_pred EEeCCccc--ccc-------------------------------------------------------------------
Confidence 98542210 111
Q ss_pred ecCCceeEEEEEEEEEcCCCceeecC-CCCccccCCCCCCcHHHHHHHHc
Q 016129 306 EKPGDYVAHIKFTVLLMPNGSDRITS-HTLQEIQSTKTIDDPEIKAWLAL 354 (394)
Q Consensus 306 ~~~g~~~aq~e~Tvlvt~~G~~~lT~-~~~~~~~s~~~~~d~e~~~ll~~ 354 (394)
.-+.+.+|+|+||+||++|+++||. .|.+ -.+|.++.+.
T Consensus 397 -~~~~~GvriEd~vlVt~~G~e~LT~~~p~~---------~~~Ie~~~~~ 436 (440)
T 2v3z_A 397 -QYRGIGIRIEDDIVITETGNENLTASVVKK---------PEEIEALMVA 436 (440)
T ss_dssp -GGTTEEEECBEEEEEETTEEEESSTTSCCS---------HHHHHHHHHH
T ss_pred -ccceeEEEEeeEEEECCCcCeECCcccCCC---------HHHHHHHHhc
Confidence 1134569999999999999999995 7753 2566666653
No 26
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=100.00 E-value=1.4e-41 Score=345.34 Aligned_cols=250 Identities=11% Similarity=0.092 Sum_probs=204.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHH-HHH----HhccCC--CcHHHHHHHHHHHHHHhhccc--------chhhhhcc
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQ-LVV----SECKPG--VKIVDLCEKGDSFIREQTGNM--------YKNVKKKI 72 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~-~v~----~~i~pG--~te~el~~~~~~~i~~~g~~~--------f~~~~~~~ 72 (394)
.++|.|||++||+.||+|++|++.++. .+. +.++|| +||.||++.++..+.+.+... |.. .
T Consensus 172 ~~~r~iK~~~Ei~~~r~A~~i~~~a~~~~~~~~~~~~i~~G~~~te~el~~~~~~~~~~~~~~~g~~~ga~~~~~----~ 247 (444)
T 3cb6_A 172 AKCLAIKDEQELANIKGASRVSVAVMSKYFVDELSTYIDQGKKITHSKFSDQMESLIDNEAFFQTKSLKLGDIDL----D 247 (444)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCBHHHHHHHHHGGGGCHHHHTCGGGCCTTCCG----G
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHhccccccccccccccc----c
Confidence 578999999999999999999999999 554 788999 999999999988876542210 111 0
Q ss_pred ccCcccceee--cCCCc-ccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 016129 73 ERGVAFPSCV--SVNNT-LCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAE 149 (394)
Q Consensus 73 ~~g~afp~~v--s~n~~-~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~ 149 (394)
..+.+||+++ |.|.. ++||.|+ +++|+ ||+|+||+|++|+||++|++|||++| ++++++++|++++++++
T Consensus 248 ~~~~~f~~iv~~g~n~~~~~H~~~~---~~~l~-gd~v~iD~g~~~~gy~sD~tRT~~v~---~~~~~~~~y~~v~~a~~ 320 (444)
T 3cb6_A 248 QLEWCYTPIIQSGGSYDLKPSAITD---DRNLH-GDVVLCSLGFRYKSYCSNVGRTYLFD---PDSEQQKNYSFLVALQK 320 (444)
T ss_dssp GEEESSCCEEECTTCCCCSTTCCCC---SSBCC-SSEEEEEECEEETTEECCEEEEEEES---CCHHHHHHHHHHHHHHH
T ss_pred ccccccCceEeccCCcCceeccCCC---CCccc-CCEEEEEEeEeeCCEeeeeeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 1246788666 57888 9999997 78898 99999999999999999999999997 68999999999999999
Q ss_pred HHHHHcCCCCChhHHHHHHHHHHHHC--CCcc-ccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceee
Q 016129 150 VALRLVRPGKKNKDVTEAIQKVAAAH--DCKI-VEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVT 226 (394)
Q Consensus 150 a~i~~lkPG~~~~dV~~ai~~~~~~~--G~~~-~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~i 226 (394)
++++++|||+++++|+.++++++++. ||.. ..+.+|||||+.+||.|..+ . + +.+.+|++||||+|||++
T Consensus 321 ~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~~~h~~GHgiGl~~he~p~~~-~-~-----~~~~~l~~Gmv~tiEPgi 393 (444)
T 3cb6_A 321 KLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFVRNLGAGIGIEFRESSLLV-N-A-----KNPRVLQAGMTLNLSIGF 393 (444)
T ss_dssp HHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCBGGGCC-S-T-----TCCCBCCTTCEEEEEEEE
T ss_pred HHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHhhcccccccccCccccCCcccc-C-C-----CCCcccCCCCEEEEEecc
Confidence 99999999999999999999999998 5653 57889999999999988433 1 1 246799999999999999
Q ss_pred e-cCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeee
Q 016129 227 S-TGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLH 305 (394)
Q Consensus 227 s-~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~ 305 (394)
+ .+. +++ +.
T Consensus 394 y~~~~------~~~----------------------------------------------------------------~~ 403 (444)
T 3cb6_A 394 GNLIN------PHP----------------------------------------------------------------KN 403 (444)
T ss_dssp EEEEC------SSC----------------------------------------------------------------CT
T ss_pred ccccC------ccc----------------------------------------------------------------cc
Confidence 6 211 111 01
Q ss_pred ecCCceeEEEEEEEEEcCCCceeecCCCCccccCCCCCCc
Q 016129 306 EKPGDYVAHIKFTVLLMPNGSDRITSHTLQEIQSTKTIDD 345 (394)
Q Consensus 306 ~~~g~~~aq~e~Tvlvt~~G~~~lT~~~~~~~~s~~~~~d 345 (394)
+.+|.+.+|+|+||+||++|+++||..|.++...++.++|
T Consensus 404 ~~~~~~gvriEd~v~vt~~g~e~Lt~~p~~l~~Ie~~~~~ 443 (444)
T 3cb6_A 404 SQSKEYALLLIDTIQITRSDPIVFTDSPKAQGDISYFFGE 443 (444)
T ss_dssp TSCSEEEEEEEEEEECCSSSCEETTCCCCSHHHHEECC--
T ss_pred ccCCceEEEEEEEEEECCCCceecccCCCcHHHHHhhhcC
Confidence 4578899999999999999999999888755554554433
No 27
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=100.00 E-value=1.5e-41 Score=344.80 Aligned_cols=207 Identities=15% Similarity=0.136 Sum_probs=169.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
+++|.|||++||+.||+|++|+++++..+++.++||+||.||++.....+ .. +..+.+||+++ |.|
T Consensus 154 ~~lR~iKs~~EI~~mr~A~~ia~~a~~~~~~~i~pG~tE~el~~~~~~~~-~~-----------g~~~~~f~~IVasG~n 221 (451)
T 3rva_A 154 HYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAAS-RQ-----------GDNDVPYTSIVALNEH 221 (451)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TC-----------CTTTSSSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHH-Hc-----------CCCcCCcCcEEEECCc
Confidence 67899999999999999999999999999999999999999998644321 11 33467898666 689
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
.+++||.|+ +.+.+++||+|+||+|+.|+||++|+||||++|..+++++++++|+++++|++++++++|||++++||+
T Consensus 222 aa~~H~~~~--~~~~l~~GdlVliD~G~~~~GY~sDiTRT~~vG~~~~~~~~~~ly~~vl~aq~aai~~ikPG~~~~di~ 299 (451)
T 3rva_A 222 ASILHYMQC--DTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIH 299 (451)
T ss_dssp GGCTTCCCC--CSSCCSSCCEEEEEEEEEETTEEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHH
T ss_pred ccccCCCCC--CCcccCCCCEEEEEeeEEECCEEEEeEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 999999997 233579999999999999999999999999999621278999999999999999999999999999999
Q ss_pred HHHHHHHH----HCCC---------------ccccCccccccccccccCCceecccCC-------CCCC--CCCceeeCC
Q 016129 166 EAIQKVAA----AHDC---------------KIVEGVLSHQLKQFVIDGNKVVLSVSN-------PDTR--VDDAEFEEN 217 (394)
Q Consensus 166 ~ai~~~~~----~~G~---------------~~~~~~~GHgiG~~~~e~p~~I~~~~~-------~~~~--~~~~~le~G 217 (394)
.++++++. +.|+ ....+.+|||||+.+||.|. +..... ...+ ....+|++|
T Consensus 300 ~aa~~~i~~~l~~~G~~~~~~~~~~~~g~~~~~f~H~~GHgiGldvHe~p~-~~~~~~g~~~~~~~~~~~l~~~~~L~~G 378 (451)
T 3rva_A 300 LLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGG-LVNDDRGTPKPAPDDHPFLRCTRMVEAR 378 (451)
T ss_dssp HHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCTTT-TBSSTTCCBCCCCTTCTTCCCCCBCCTT
T ss_pred HHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCcccccCCcccCcc-ccccccccccccccccccCCCCCCcCCC
Confidence 99988774 3343 13456789999999999883 322110 0011 346799999
Q ss_pred cEEEEceeeecC
Q 016129 218 EVYAVDIVTSTG 229 (394)
Q Consensus 218 mV~aIEp~is~g 229 (394)
|||||||+++..
T Consensus 379 MV~TIEPGiY~~ 390 (451)
T 3rva_A 379 QVFTIEPGLYFI 390 (451)
T ss_dssp CEEEECCEEECC
T ss_pred CEEEECCEEeEc
Confidence 999999999853
No 28
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=100.00 E-value=1.4e-40 Score=334.17 Aligned_cols=207 Identities=14% Similarity=0.137 Sum_probs=178.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccce----eec
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPS----CVS 83 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~----~vs 83 (394)
.++|.|||++||+.||+|++|++.++..+.+.++||+||.||++.++..+.+.++..+.. +..|++ +.|
T Consensus 152 ~~~R~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g 224 (401)
T 1chm_A 152 MRMRMIKSAEEHVMIRHGARIADIGGAAVVEALGDQVPEYEVALHATQAMVRAIADTFED-------VELMDTWTWFQSG 224 (401)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHHHHHCSS-------CCBCCCEEEEEEG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhccccCCC-------ccccCcceeeeec
Confidence 678999999999999999999999999999999999999999999999888876643321 223553 447
Q ss_pred CCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhH
Q 016129 84 VNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKD 163 (394)
Q Consensus 84 ~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~d 163 (394)
.|...+|+.|+ +++|++||+|+||+|++|+||++|+||||++|+ ++++++++|++++++++++++++|||+++++
T Consensus 225 ~n~~~~H~~~~---~~~l~~gd~v~iD~G~~~~gY~sD~tRT~~~G~--~~~~~~~~y~~v~~a~~~~i~~~~pG~~~~~ 299 (401)
T 1chm_A 225 INTDGAHNPVT---TRKVNKGDILSLNCFPMIAGYYTALERTLFLDH--CSDDHLRLWQVNVEVHEAGLKLIKPGARCSD 299 (401)
T ss_dssp GGGGSTTCCEE---SCBCCTTCEEEEEEECEETTEECCEEEEEEESC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHH
T ss_pred ccccccccCCC---CCccCCCCEEEEEEEEeeCCEeecceEEEECCC--CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHH
Confidence 89999999997 789999999999999999999999999999997 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCcccc-CccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecC
Q 016129 164 VTEAIQKVAAAHDCKIVE-GVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTG 229 (394)
Q Consensus 164 V~~ai~~~~~~~G~~~~~-~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g 229 (394)
|+++++++++++||.... +.+|||+|..+|+.|..+.... .++.+.+|++||||+|||+++.+
T Consensus 300 v~~~~~~~~~~~G~~~~~~~~~GHgiG~~~h~~~~~~g~~~---~~~~~~~L~~Gmv~tiEPgiy~~ 363 (401)
T 1chm_A 300 IARELNEIFLKHDVLQYRTFGYGHSFGTLSHYYGREAGLEL---REDIDTVLEPGMVVSMEPMIMLP 363 (401)
T ss_dssp HHHHHHHHHHHHTCGGGBCSCSCBBCSBEETTEECCTTSBC---CTTCCCBCCTTCEEEECCEEEEC
T ss_pred HHHHHHHHHHHcCCCcccCCCCCcccCccCCccccccCccc---cCCCCCccCCCCEEEEcCeeeec
Confidence 999999999999997544 4579999999998763221111 11256799999999999999743
No 29
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=100.00 E-value=6.2e-41 Score=342.88 Aligned_cols=253 Identities=11% Similarity=0.113 Sum_probs=206.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccC------CCcHHHHHHHHHHHHHH-----hhc---ccch----hhh
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKP------GVKIVDLCEKGDSFIRE-----QTG---NMYK----NVK 69 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~p------G~te~el~~~~~~~i~~-----~g~---~~f~----~~~ 69 (394)
.++|.|||++||+.||+|+++++.++..+.+.++| |+||.||++.++.++.+ .|. ..+. +..
T Consensus 172 ~~lr~iK~~~Ei~~~r~A~~i~~~a~~~~~~~i~~~i~~g~g~te~el~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 251 (467)
T 3biq_A 172 SKVWEVKDVNEQAFLSVSSKGSDKFMDLLSNEMVRAVDEELKITNAKLSDKIENKIDDVKFLKQLSPDLSALCPPNYKFN 251 (467)
T ss_dssp HHHTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBHHHHHHHHHHGGGCHHHHHHHHHHHHTTSCTTCCCC
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCccHHHHHHHHHHHHHhhhhhhcCCccccccccccccCC
Confidence 56899999999999999999999999999999998 99999999999988876 440 0000 000
Q ss_pred hccccCcccceee--cCCCc-ccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHH
Q 016129 70 KKIERGVAFPSCV--SVNNT-LCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANT 146 (394)
Q Consensus 70 ~~~~~g~afp~~v--s~n~~-~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~ 146 (394)
....+.+||+++ |.|.. ++||.|+ +++|++||+|+||+|++|+||++|++|||++| ++++++++|+++++
T Consensus 252 -~~~~~~~f~~iv~~G~n~~~~~H~~~~---~~~l~~gd~v~iD~g~~~~gy~sD~tRT~~~g---~~~~~~~~~~~v~~ 324 (467)
T 3biq_A 252 -FDLLDWTYSPIIQSGKKFDLRVSARST---NDQLYGNGCILASCGIRYNNYCSNITRTFLID---PSEEMANNYDFLLT 324 (467)
T ss_dssp -GGGEEESSCCEEECTTCCCCSTTCCCC---SSBCCCSEEEEEEECEEETTEECCEEEEEEES---CCHHHHHHHHHHHH
T ss_pred -cccccCCCCCeEEecCCcceeeccCCC---CCccCCCCEEEEEEeEEECCEEeeeeEEEEeC---CCHHHHHHHHHHHH
Confidence 001256788666 57888 9999997 78999999999999999999999999999998 68999999999999
Q ss_pred HHHHHHHH-cCCCCChhHHHHHHHHHHHHCCCc---cccCccccccccccccCCceecccCCCCCCCC-CceeeCCcEEE
Q 016129 147 AAEVALRL-VRPGKKNKDVTEAIQKVAAAHDCK---IVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVD-DAEFEENEVYA 221 (394)
Q Consensus 147 a~~a~i~~-lkPG~~~~dV~~ai~~~~~~~G~~---~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~-~~~le~GmV~a 221 (394)
++++++++ +|||+++++|+.+++++++++|+. ...+.+|||||+.+||.|..+ . + +. +.+|++||||+
T Consensus 325 a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h~~GHgiGl~~hE~p~~~-~-~-----~~~~~~l~~Gmv~t 397 (467)
T 3biq_A 325 LQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTKNIGSLIGLEFRDSNFIL-N-V-----KNDYRKIQRGDCFN 397 (467)
T ss_dssp HHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCSCCEEECSSSSCCGGGBS-S-T-----TCCSCCCCTTCEEE
T ss_pred HHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcCCCCcccccccccccCCccC-C-C-----CCCCCccCCCCEEE
Confidence 99999999 999999999999999999999743 235679999999999998323 2 1 13 57999999999
Q ss_pred EceeeecCCCCCcccCCCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCcccc
Q 016129 222 VDIVTSTGDGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPY 301 (394)
Q Consensus 222 IEp~is~g~g~~~~~~~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y 301 (394)
|||+++. +. .+
T Consensus 398 iEPgiy~----~~-~~---------------------------------------------------------------- 408 (467)
T 3biq_A 398 ISFGFNN----LK-DS---------------------------------------------------------------- 408 (467)
T ss_dssp EEEEEEE----EC-CS----------------------------------------------------------------
T ss_pred EeCeEEe----ee-cC----------------------------------------------------------------
Confidence 9999861 00 00
Q ss_pred CeeeecCCceeEEEEEEEEEc--CCCceeec-CCCCccccCCCCCCcHH
Q 016129 302 PVLHEKPGDYVAHIKFTVLLM--PNGSDRIT-SHTLQEIQSTKTIDDPE 347 (394)
Q Consensus 302 ~v~~~~~g~~~aq~e~Tvlvt--~~G~~~lT-~~~~~~~~s~~~~~d~e 347 (394)
+++|.+.+|+|+||+|| ++|+++|| ..|.++...++.+.++|
T Consensus 409 ----~~~g~~gvriEd~v~Vt~~~~G~e~Lt~~~p~~~~~i~~~~~~~~ 453 (467)
T 3biq_A 409 ----QSANNYALQLADTVQIPLDETEPPRFLTNYTKAKSQISFYFNNEE 453 (467)
T ss_dssp ----SCSSCEEEEEEEEEECCSSTTSCCEESCCSCCCHHHHEECC----
T ss_pred ----CCCCccEEEEEEEEEEecCCCCcEEecccCCCCHHHHHHHHhccc
Confidence 13577889999999999 99999999 88876666666666544
No 30
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=100.00 E-value=2e-41 Score=345.65 Aligned_cols=231 Identities=14% Similarity=0.142 Sum_probs=199.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCC-----cHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGV-----KIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV 82 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~-----te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v 82 (394)
+..|+|||++||+.||+|++|++.++..+.+.++||+ ||.||++.++..+.+.|+. .+|++++
T Consensus 224 ~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~~~~~~tE~el~~~l~~~~~~~G~~------------~~~~~iv 291 (470)
T 4b28_A 224 EKARSVKGPDEIRAMRCASHACEVAVRKMEDFARSKVGDGVTCENDIWAILHSENVRRGGE------------WIETRLL 291 (470)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCBHHHHHHHHHHHHHTTTCC------------EESCCCE
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC------------cCCCcee
Confidence 6789999999999999999999999999999999999 9999999999988877542 2344333
Q ss_pred --cCCCcccCCCCCCCCCccccCCCEEEEEeeeE-ECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 016129 83 --SVNNTLCHFSPLASDETVLQEGDMIKIDLGCH-IDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGK 159 (394)
Q Consensus 83 --s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~-~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~ 159 (394)
+.|...+||.|+ +++|++||+|+||+|+. ++||++|+||||++|+++++++++++|++++++++++++++|||+
T Consensus 292 asG~n~~~~H~~~~---~~~l~~Gd~vliD~G~~g~~GY~sDitRT~~vG~~~~s~~~~~~y~~v~~a~~a~i~~ikpG~ 368 (470)
T 4b28_A 292 ASGPRSNPWFQECG---PRVCQRNEIISFDTDLVGAYGICTDISRSWWIGDQKPRADMIYAMQHGVEHIRTNMEMLKPGV 368 (470)
T ss_dssp EEGGGGSSTTCCCC---SCBCCSSEEEEEECCEECGGGCEECCEEEEEESSSCCCHHHHHHHHHHHHHHHHHHHTCCTTC
T ss_pred EEcCccccCCCCCC---CccccCCCEEEEEecccccCeEEEeeEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 578888999986 78999999999999998 999999999999999444899999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccCCC
Q 016129 160 KNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLDEK 239 (394)
Q Consensus 160 ~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~~~ 239 (394)
+++||+.+++++++++|... .+.+|||||+ .||.| .|.+.+..+.++.+.+|++||||+|||+++.
T Consensus 369 ~~~di~~~ar~~i~~~~~~~-~~~~GHGIGl-~HE~P-~i~~~~~~~~~~~~~~L~~GMV~tiEPgiy~----------- 434 (470)
T 4b28_A 369 MIPELSANTHVLDAKFQKQK-YGCLMHGVGL-CDEWP-LVAYPDHAVAGAYDYPLEPGMTLCVEALISE----------- 434 (470)
T ss_dssp BHHHHHHTCCCCCHHHHTTC-CSCSEEEESS-SEEEE-EECCTTTCCTTSSCCBCCTTCEEEEEEEEEC-----------
T ss_pred CHHHHHHHHHHHHHHhhhcC-CCCccCCCCc-CCCCC-cccCccccccCCCCCEECCCCEEEEcCeeec-----------
Confidence 99999999999888755432 2568999999 69999 6765433333446789999999999998762
Q ss_pred ceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEEEE
Q 016129 240 QTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKFTV 319 (394)
Q Consensus 240 ~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~Tv 319 (394)
.+|.+.+++|+||
T Consensus 435 -------------------------------------------------------------------~~g~~GvriEd~v 447 (470)
T 4b28_A 435 -------------------------------------------------------------------EGGDFSIKLEDQV 447 (470)
T ss_dssp -------------------------------------------------------------------TTCSCEEEEEEEE
T ss_pred -------------------------------------------------------------------CCCcEEEEEeeEE
Confidence 1355679999999
Q ss_pred EEcCCCceeecCCCC
Q 016129 320 LLMPNGSDRITSHTL 334 (394)
Q Consensus 320 lvt~~G~~~lT~~~~ 334 (394)
+||++|+++||..|.
T Consensus 448 lVte~G~e~LT~~p~ 462 (470)
T 4b28_A 448 LITEDGYENLTKYPF 462 (470)
T ss_dssp EECSSSEEECCCCCC
T ss_pred EEeCCcCeECCCCCC
Confidence 999999999999886
No 31
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=100.00 E-value=5.3e-40 Score=337.91 Aligned_cols=209 Identities=15% Similarity=0.141 Sum_probs=172.7
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
.++|.|||++||+.||+|++|+.+++..+++.++||+||.||++.++..+.+.+ +..+.+|++++ |.|
T Consensus 182 ~~~R~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~~G~tE~el~~~~~~~~~~~~----------G~~~~~~~~iv~sG~n 251 (494)
T 2iw2_A 182 VECRVFKTDMELEVLRYTNKISSEAHREVMKAVKVGMKEYELESLFEHYCYSRG----------GMRHSSYTCICGSGEN 251 (494)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHH----------CCCEESSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhC----------CCCcCCCCceEEEcCc
Confidence 568999999999999999999999999999999999999999999988877652 12356788555 699
Q ss_pred CcccCCCCC-CCCCccccCCCEEEEEeeeEECceEEeEEEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhH
Q 016129 86 NTLCHFSPL-ASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVL-QDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKD 163 (394)
Q Consensus 86 ~~~~H~~P~-~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~v-G~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~d 163 (394)
.+++||.++ .+++++|++||+|+||+|+.|+||++|+||||+| |+ ++++++++|+++++|++++++++|||+++.|
T Consensus 252 ~~~~Hy~~~g~p~~~~l~~Gd~vliD~G~~~~gY~sDitRT~~v~G~--~s~~q~~~y~~v~~a~~~~i~~~kpG~~~~d 329 (494)
T 2iw2_A 252 SAVLHYGHAGAPNDRTIQNGDMCLFDMGGEYYCFASDITCSFPANGK--FTADQKAVYEAVLRSSRAVMGAMKPGVWWPD 329 (494)
T ss_dssp GGCSSCSSTTSCSCCBCCTTCEEEEEECEEBTTBCCCEEEEEETTSC--CCHHHHHHHHHHHHHHHHHHHHCCTTCBHHH
T ss_pred cccccccccCCCCCCccCCCCEEEEEeeEEECCEEEEeeEEEEECCc--CCHHHHHHHHHHHHHHHHHHHHhCCCCcHHH
Confidence 999998653 2336899999999999999999999999999999 65 8999999999999999999999999999999
Q ss_pred HHHHHHHHHH----HCCCc---------------cccCccccccccccccCCcee-----cccCCCCCCCCCceeeCCcE
Q 016129 164 VTEAIQKVAA----AHDCK---------------IVEGVLSHQLKQFVIDGNKVV-----LSVSNPDTRVDDAEFEENEV 219 (394)
Q Consensus 164 V~~ai~~~~~----~~G~~---------------~~~~~~GHgiG~~~~e~p~~I-----~~~~~~~~~~~~~~le~GmV 219 (394)
|+.++++++. +.|+. ...+.+||+||+.+||.+... +..+.......+.+|++|||
T Consensus 330 i~~~a~~~i~~~l~~~G~~~g~~~~~~~~g~~~~~~~H~~GHgiGl~vHd~~~~~~~~~~~~~p~~~~~~~~~~L~~GMV 409 (494)
T 2iw2_A 330 MHRLADRIHLEELAHMGILSGSVDAMVQAHLGAVFMPHGLGHFLGIDVHDVGGYPEGVERIDEPGLRSLRTARHLQPGMV 409 (494)
T ss_dssp HHHHHHHHHHHHHHHTTSBCSCHHHHHHTTTHHHHCCSCSCCBCSSSSSCSCSSCTTCCCCCSTTGGGCSCCCBCCTTCE
T ss_pred HHHHHHHHHHHHHHHcCCccccHHHHHhcccccccCCCCCcCCCCcccccCCCcccccccccccccccCCCCCEeCCCCE
Confidence 9999998875 45652 234668999999999854211 00111111124679999999
Q ss_pred EEEceeeec
Q 016129 220 YAVDIVTST 228 (394)
Q Consensus 220 ~aIEp~is~ 228 (394)
|+|||+++.
T Consensus 410 ~tiEPGiy~ 418 (494)
T 2iw2_A 410 LTVEPGIYF 418 (494)
T ss_dssp EEECCEEEC
T ss_pred EEECCcccc
Confidence 999999873
No 32
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=100.00 E-value=1.1e-40 Score=341.91 Aligned_cols=204 Identities=14% Similarity=0.149 Sum_probs=166.7
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee--cCC
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV--SVN 85 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v--s~n 85 (394)
+++|.|||++||+.||+|++|+++++..+++.++||+||.||++.....+ .. +..+.+||+++ |.|
T Consensus 154 ~~lR~iKs~~EIe~mR~A~~ia~~a~~~~~~~ikpG~tE~el~~~~~~~~-~~-----------g~~~~sf~~IVasG~n 221 (517)
T 3l24_A 154 HYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLAT-QH-----------SENDNPYGNIVALNEN 221 (517)
T ss_dssp HHHHTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-TC-----------CGGGSSSCCEEEEGGG
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH-Hc-----------CCCcCCcCCEEEEccc
Confidence 67899999999999999999999999999999999999999998644322 11 23467898665 689
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCChhHHH
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKNKDVT 165 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~ 165 (394)
.+++||.|+ +...|++||+|+||+|+.|+||++|+||||++|. +++++++|+++++|++++++++|||++++||+
T Consensus 222 aa~~H~~p~--~~~~l~~GDlVliD~G~~~~GY~sDiTRT~~vG~---~~e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~ 296 (517)
T 3l24_A 222 CAILHYTHF--DRVAPATHRSFLIDAGANFNGYAADITRTYDFTG---EGEFAELVATMKQHQIALMNQLAPGKLYGELH 296 (517)
T ss_dssp GGCTTCCCC--CSSCCSSCCEEEEEEEEEETTEEEEEEEEEESSS---CSHHHHHHHHHHHHHHHHHTTCCTTCBHHHHH
T ss_pred cccccCCCC--CCccccCCCEEEEeecEEECCEEEEeEEEEEcCC---CHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH
Confidence 999999997 2335799999999999999999999999999994 47899999999999999999999999999999
Q ss_pred HHHHHHHH----HCCC---------------ccccCccccccccccccCCceecccC-------CCCCC--CCCceeeCC
Q 016129 166 EAIQKVAA----AHDC---------------KIVEGVLSHQLKQFVIDGNKVVLSVS-------NPDTR--VDDAEFEEN 217 (394)
Q Consensus 166 ~ai~~~~~----~~G~---------------~~~~~~~GHgiG~~~~e~p~~I~~~~-------~~~~~--~~~~~le~G 217 (394)
+++++++. +.|+ ....+.+|||||+.+||.| .+.... ....+ +.+.+|++|
T Consensus 297 ~aa~~~i~~~L~~~G~~~~~~~~~~~~g~~~~~f~HglGHgiGLdvHE~p-~~~~~~~g~~~~~~~~~p~l~~~~~Le~G 375 (517)
T 3l24_A 297 LDCHQRVAQTLSDFNIVDLSADEIVAKGITSTFFPHGLGHHIGLQVHDVG-GFMADEQGAHQEPPEGHPFLRCTRKIEAN 375 (517)
T ss_dssp HHHHHHHHHHHHHTTSBSSCHHHHHHTTCGGGTCCSCSCCBCSSSSSCCC-CTTC---------------CCTTCBCCTT
T ss_pred HHHHHHHHHHHHhcCCccccHHHHHhcCcccccCCCCCCCCCCcccccCc-cccccccccccccccccccCCCCccccCC
Confidence 99988764 3443 1345678999999999988 332210 00001 346799999
Q ss_pred cEEEEceeeecC
Q 016129 218 EVYAVDIVTSTG 229 (394)
Q Consensus 218 mV~aIEp~is~g 229 (394)
|||||||+++..
T Consensus 376 MV~TIEPGiY~~ 387 (517)
T 3l24_A 376 QVFTIEPGLYFI 387 (517)
T ss_dssp EEEEECCEEECC
T ss_pred cEEEECCEEeec
Confidence 999999999853
No 33
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=336.03 Aligned_cols=249 Identities=16% Similarity=0.144 Sum_probs=207.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH----hc-cCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceee
Q 016129 8 EKELDLTSPEVVTKYKSAAEIANKALQLVVS----EC-KPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCV 82 (394)
Q Consensus 8 ~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~v~~----~i-~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~v 82 (394)
..+|+|||++||+.||+|+.++..++..++. .+ +||+||.||++.++.++.+.+ +..+.+||+++
T Consensus 316 ~~~R~iK~~~EI~~~r~A~~~~~~a~~~~~~~l~~~i~~~g~tE~el~~~l~~~~~~~~----------g~~~~sf~~iv 385 (623)
T 3ctz_A 316 CIAKAVKNSAESEGMRRAHIKDAVALCELFNWLEKEVPKGGVTEISAADKAEEFRRQQA----------DFVDLSFPTIS 385 (623)
T ss_dssp HHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCBHHHHHHHHHHHHHTST----------TEEEESSCCEE
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhcC----------CCcCCCCCcee
Confidence 5789999999999999999999988877664 46 899999999999877654321 23467898666
Q ss_pred --cCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEEeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCC-CC
Q 016129 83 --SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIAVVAHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRP-GK 159 (394)
Q Consensus 83 --s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~ad~aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkP-G~ 159 (394)
|.|..++||.|..+++++|++||+|+||+|++|+||++|+||||++|+ ++++++++|+++++++.+++++++| |+
T Consensus 386 ~~G~n~a~~H~~~~~~~~~~l~~gd~vliD~G~~y~gy~sDiTRT~~vG~--~s~~~~~~y~~vl~a~~~~~~~~~p~G~ 463 (623)
T 3ctz_A 386 STGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFET--PTAYEKECFTYVLKGHIAVSAAVFPTGT 463 (623)
T ss_dssp EEGGGGGCTTCCCCGGGCCBCCTTSCEEEEECEEETTEECCEEEEECSSC--CCHHHHHHHHHHHHHHHHHHTCCEETTC
T ss_pred eecCccccccCCCCCCCCcccCCCCEEEEEEeEEECCEEEEEEEEEECCC--CCHHHHHHHHHHHHHHHHHHHHhCcCCC
Confidence 689999999996445789999999999999999999999999999997 8999999999999999999999999 99
Q ss_pred ChhHHHHHHHHHHHHCCCccccCccccccc--cccccCCceecccCCCCCCCCCceeeCCcEEEEceeeecCCCCCcccC
Q 016129 160 KNKDVTEAIQKVAAAHDCKIVEGVLSHQLK--QFVIDGNKVVLSVSNPDTRVDDAEFEENEVYAVDIVTSTGDGKPKLLD 237 (394)
Q Consensus 160 ~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG--~~~~e~p~~I~~~~~~~~~~~~~~le~GmV~aIEp~is~g~g~~~~~~ 237 (394)
++.+|+.++++++.+.|+. ..+.+||||| +.+||+|..|... ...+.+|++||||+|||+++.
T Consensus 464 ~~~~id~~ar~~l~~~G~~-~~h~~GHgvG~~l~vHE~P~~i~~~-----~~~~~~L~~GMv~tiEPGiy~--------- 528 (623)
T 3ctz_A 464 KGHLLDSFARSALWDSGLD-YLHGTGHGVGSFLNVHEGPCGISYK-----TFSDEPLEAGMIVTDEPGYYE--------- 528 (623)
T ss_dssp BGGGGGGGGTHHHHHTTCC-CSSCSEEBCCSSSCSSCCSCEECTT-----CSCSCBCCTTCEEEECCEEEE---------
T ss_pred cHHHHHHHHHHHHHHhCCC-CCCCccccCCCCCCCCCCCccCCCC-----CCCCCccCCCeEEEEeCcEEE---------
Confidence 9999999999999999996 4577999999 9999999534321 124578999999999999861
Q ss_pred CCceEEEecccccccccCchhHHHHHHHHHhhCCCCccccccchhhhhhhHHHHHHHCCCccccCeeeecCCceeEEEEE
Q 016129 238 EKQTTIYKRAVDKNYHLKMKASRFIFSEINQKFPIMPFTARALEEKRARLGLVECVNHELLQPYPVLHEKPGDYVAHIKF 317 (394)
Q Consensus 238 ~~~~tv~~~~~~~~y~lk~~~~r~~~~~i~~~~~~~pf~~r~~~~~~~~~g~~e~~~~~ll~~y~v~~~~~g~~~aq~e~ 317 (394)
+|.+.+++|+
T Consensus 529 ----------------------------------------------------------------------~g~~GiRiEd 538 (623)
T 3ctz_A 529 ----------------------------------------------------------------------DGAFGIRIEN 538 (623)
T ss_dssp ----------------------------------------------------------------------TTTEEEECBE
T ss_pred ----------------------------------------------------------------------CCceEEEEee
Confidence 3456799999
Q ss_pred EEEEcCC------------CceeecCCCCccccCCCCCCcHHHHHHHH
Q 016129 318 TVLLMPN------------GSDRITSHTLQEIQSTKTIDDPEIKAWLA 353 (394)
Q Consensus 318 Tvlvt~~------------G~~~lT~~~~~~~~s~~~~~d~e~~~ll~ 353 (394)
||+||++ |+++||..|.+.-..++++-+++=++.|+
T Consensus 539 ~vlVt~~~~~~~~~~~~~lg~e~LT~~P~~~~~i~~~ll~~~e~~wln 586 (623)
T 3ctz_A 539 VVLVVPVKTKYNFNNRGSLTLEPLTLVPIQTKMIDVDSLTDKECDWLN 586 (623)
T ss_dssp EEEEEEECCSSCCSSSCEEEEEECCCCCCCGGGSCGGGSCHHHHHHHH
T ss_pred EEEEecCCcccccccccccCCceeeeCCccHHHHHHHhCCHHHHHHHH
Confidence 9999998 89999998885555555544443344444
No 34
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=96.34 E-value=0.019 Score=53.25 Aligned_cols=86 Identities=13% Similarity=0.184 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCC-CCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHF-SPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~-~P~~~~ 97 (394)
..|++-+++.++++.+++.++||++-.||.+.+.+.+.+.|-..|... ..+.+-....+ .+.|+ .|. +
T Consensus 122 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~G~~~~~~~-------~GHgiG~~~hE~p~i~~~~~~~--~ 192 (262)
T 3mx6_A 122 KPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVRDY-------TGHGIGRVFHDKPSILNYGRNG--T 192 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSTTCBHHHHHHHHHHHHHHTTCEECCSC-------CEEECSSSSSEEEEECSSCCTT--C
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCc-------cccccCCcccCCCcccccCCCC--C
Confidence 456777888889999999999999999999999999988765433211 11111111111 13343 232 4
Q ss_pred CccccCCCEEEEEeeeEE
Q 016129 98 ETVLQEGDMIKIDLGCHI 115 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~ 115 (394)
+.+|++|.++.|+-|...
T Consensus 193 ~~~L~~Gmv~tiEPgiy~ 210 (262)
T 3mx6_A 193 GLTLKEGMFFTVEPMINA 210 (262)
T ss_dssp SCBCCTTCEEEECCEEES
T ss_pred CCEeCCCCEEEEeCEEEc
Confidence 678999999999998764
No 35
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=95.66 E-value=0.046 Score=51.36 Aligned_cols=101 Identities=18% Similarity=0.274 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++.+++.++++.+++.++||++..||.+.+.+.+.+.|-..|... ..+.+-....+ .+.|+.. +.++
T Consensus 155 ~~~~~~~~v~~a~~~~i~~~kpG~~~~di~~~~~~~~~~~G~~~~~~~-------~GHgiG~~~hE~P~i~~~~~-~~~~ 226 (285)
T 3pka_A 155 EHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDF-------TGHGIGTTFHNGLVVLHYDQ-PAVE 226 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBTTHHHHHHHHHHHTTTCEECCSS-------CEEBCSSSSSCSCEECSSCC-TTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHcCCccCCCc-------ccccCCCcccCCCcccCccC-CCCC
Confidence 466778888899999999999999999999999998887765433211 11111111111 1223211 1245
Q ss_pred ccccCCCEEEEEeeeEE---------Cc---------eEEeEEEEEEeC
Q 016129 99 TVLQEGDMIKIDLGCHI---------DG---------FIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~---------dG---------Y~ad~aRT~~vG 129 (394)
.+|++|.++.|+.|... +| |-.-+..|++|.
T Consensus 227 ~~L~~Gmv~tiEPgiy~~~~~~~~~~~gw~~~~~~g~~gvriEdtv~Vt 275 (285)
T 3pka_A 227 TIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVT 275 (285)
T ss_dssp CBCCTTBEEEECCEEESSCSCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CccCCCCEEEEcCEEEcCCCceeecCCCceEEecCCCcEEEEeeEEEEC
Confidence 78999999999999875 23 345677889885
No 36
>3q6d_A Proline dipeptidase; structural genomics, csgid, center for structural genomics O infectious diseases, aminopeptidase, viral protein; 1.97A {Bacillus anthracis}
Probab=95.65 E-value=0.072 Score=51.46 Aligned_cols=100 Identities=17% Similarity=0.149 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCcc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETV 100 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~~ 100 (394)
..|++-+++.+++..+++.++||++-.||...+.+.+.+.|-..+.. .+..+.+-...++ .+...| .++.+
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~------h~~GHgiGl~~he-~p~i~~--~~~~~ 309 (356)
T 3q6d_A 239 KLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFG------HSTGHGIGLEIHE-APGLAF--RSDTV 309 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCC------SCSEEECSSSSSE-EEEEST--TCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCC------CCCcccCCCCcCc-CCCCCC--CCCCC
Confidence 45677788889999999999999999999999999999876432110 0111111111111 111122 23578
Q ss_pred ccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016129 101 LQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 101 L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
|++|.++.|+.|..+.| +-.-+..|++|.
T Consensus 310 l~~Gmv~tiEPgiy~~g~~gvriEd~v~vt 339 (356)
T 3q6d_A 310 LEPGMAVTVEPGIYIPGIGGVRIEDDIIVT 339 (356)
T ss_dssp CCTTCEEEECCEEEETTTEEEECBEEEEEC
T ss_pred cCCCCEEEECCEEEECCCCeEEEccEEEEe
Confidence 99999999999998887 456688899985
No 37
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=95.53 E-value=0.075 Score=49.10 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCC-CCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHF-SPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~-~P~~~~ 97 (394)
..|++-+++.++++.+++.++||++-.||...+.+.+.+.|-..|... ..+.+-....+ .+.++ .| .+
T Consensus 120 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~~~-------~GHgiG~~~he~p~i~~~~~~--~~ 190 (263)
T 2gg2_A 120 MGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREY-------CGHGIGRGFHEEPQVLHYDSR--ET 190 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHTTCEECSSC-------CEEECSSSSSEEEEECSSCCT--TC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEECCCc-------ccccCCcceecCCcccCccCC--CC
Confidence 467778888899999999999999999999999999988765432211 11111111111 12222 22 24
Q ss_pred CccccCCCEEEEEeeeEEC------------------ceEEeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHID------------------GFIAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d------------------GY~ad~aRT~~vG 129 (394)
+.+|++|.++.|+.|.... +|..-+..|++|.
T Consensus 191 ~~~l~~Gmv~tiEPgi~~~~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 240 (263)
T 2gg2_A 191 NVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVT 240 (263)
T ss_dssp CCBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CCCcCCCCEEEEecEEEcCCCceEEcCCCceEEecCCCeEEEEEEEEEEC
Confidence 5789999999999988642 3455677888885
No 38
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=95.45 E-value=0.054 Score=50.10 Aligned_cols=103 Identities=17% Similarity=0.285 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCCCCCCCcc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDETV 100 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~~ 100 (394)
..|+.-+++.++++.+++.++||++..||...+.+.+...|-..|... ...|+... +.....+.++.. +.++.+
T Consensus 118 ~~~~l~~~v~~a~~~~i~~~kpG~~~~di~~a~~~~~~~~g~~~~~~~---~GHgiG~~--~~e~p~i~~~~~-~~~~~~ 191 (264)
T 3tb5_A 118 EIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDF---VGHGIGPT--IHESPMIPHYGE-AGKGLR 191 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHTTCEECCSC---CEEECSSS--SSEEEEECSSCC-TTCSCB
T ss_pred HHHHHHHHHHHHHHHHHhhhCCCCCHHHHHHHHHHHHHHcCCceeeec---eecCCCCC--CccCCccCcccc-CCCCCC
Confidence 456777888999999999999999999999999999988765433321 11121111 000001122211 124578
Q ss_pred ccCCCEEEEEeeeEECc------------------eEEeEEEEEEeC
Q 016129 101 LQEGDMIKIDLGCHIDG------------------FIAVVAHTHVLQ 129 (394)
Q Consensus 101 L~~GDvV~iDlG~~~dG------------------Y~ad~aRT~~vG 129 (394)
|++|.++.|+-|..+.+ +-.-+-.|++|.
T Consensus 192 L~~Gmv~tiEPgiy~~~~~~~~~~d~wt~~~~~g~~gvriEd~vlVT 238 (264)
T 3tb5_A 192 LKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAIT 238 (264)
T ss_dssp CCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECCEEEECC
T ss_pred ccCCcEEEEeeeEEcCCCceEEcCCCCeEEecCCccEEEeceEEEEc
Confidence 99999999999886532 233456788885
No 39
>3fm3_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3fmq_A* 3fmr_A*
Probab=95.38 E-value=0.039 Score=53.73 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceec-ccCCCCCCCCCcee
Q 016129 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVL-SVSNPDTRVDDAEF 214 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~-~~~~~~~~~~~~~l 214 (394)
..+++.+.+.++++.+...+|||++..||.+.+++.+++.|........|+.....+.+ .+. ..|+.+ ..+.+|
T Consensus 47 ~~R~Aa~I~~~v~~~~~~~ikpG~t~~el~~~~e~~i~~~~~~~~~~g~~FP~ciSvN~---~v~Hg~P~~~--~~~~~L 121 (358)
T 3fm3_A 47 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMNS---CAAHYTVNPG--EQDIVL 121 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEETT---EEECCCCCTT--CCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHhcCCCcccCCCCCcEEeeCC---EEEecCCCCC--CCCeEe
Confidence 45778888889999999999999999999999999999887643221112211111110 110 112110 135789
Q ss_pred eCCcEEEEceeeec
Q 016129 215 EENEVYAVDIVTST 228 (394)
Q Consensus 215 e~GmV~aIEp~is~ 228 (394)
++|+++.||.++.-
T Consensus 122 ~~GDiV~ID~G~~~ 135 (358)
T 3fm3_A 122 KEDDVLKIDFGTHS 135 (358)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCCCEEEEEeeEEE
Confidence 99999999999863
No 40
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=95.35 E-value=0.077 Score=49.11 Aligned_cols=101 Identities=15% Similarity=0.216 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++-+++.++++.+++.++||++-.||...+.+.+.+.|-..|... ..+.+-....+ .+.++.. +.++
T Consensus 131 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~v~~~~~~~~~~~G~~~~~~~-------~GHgiG~~~he~p~i~~~~~-~~~~ 202 (262)
T 1o0x_A 131 RGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGFNVIRDY-------VGHGVGRELHEDPQIPNYGT-PGTG 202 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTSBHHHHHHHHHHHHHHTTCEECCSS-------CEEECSSSSSEEEEECSCCC-TTCS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCCc-------ccCcccccccCCCccCCCCC-CCCC
Confidence 467778888999999999999999999999999999988765433221 11111111111 1222211 1236
Q ss_pred ccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeC
Q 016129 99 TVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG 129 (394)
.+|++|.++.|+.|... +++..-+..|++|.
T Consensus 203 ~~L~~Gmv~tiEPgi~~g~~~v~~~~~~w~~~~~~g~~gvriEdtvlVt 251 (262)
T 1o0x_A 203 VVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILIT 251 (262)
T ss_dssp CBCCTTCEEEECCEEESSCCCEEECTTSSCEEETTCCCEEECBEEEEEC
T ss_pred CccCCCCEEEECCEEEcCCCceeecCCCceEEeeCCCcEEEEEEEEEEC
Confidence 78999999999998865 23445567888885
No 41
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=95.34 E-value=0.084 Score=48.37 Aligned_cols=101 Identities=20% Similarity=0.344 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC---cccCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN---TLCHFSPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~---~~~H~~P~~~~ 97 (394)
..|++-+++.++++.+++.++||++..||...+.+.+.+.|-..|... ..+.+-....+ .++++.. +.+
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~g~~~~~~~-------~GHgiG~~~he~p~~i~~~~~-~~~ 189 (252)
T 1qxy_A 118 MKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNL-------TGHGVGLSLHEAPAHVLNYFD-PKD 189 (252)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBTHHHHHHHHHHHHHTTCEECTTC-------CEEECSSSSSEEEEEECSSCC-TTC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEecCCc-------cccccCcccccCCccccCCCC-CCC
Confidence 456777888899999999999999999999999999988765433221 11111111111 1223321 123
Q ss_pred CccccCCCEEEEEeeeEE------------------CceEEeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHI------------------DGFIAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~------------------dGY~ad~aRT~~vG 129 (394)
+.+|++|.++.|+.|... +++-.-+..|++|.
T Consensus 190 ~~~l~~Gmv~tiEPgi~~g~~~~~~~~~~~~~~~~~g~~g~riEdtvlVt 239 (252)
T 1qxy_A 190 KTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVT 239 (252)
T ss_dssp CCBCCTTBEEEECCEEESSCSSCEECSSSSCEECTTCCCEEEEEEEEECC
T ss_pred CCCccCCCEEEEecEEEcCCCceEecCCCceEEecCCCcEEEEEEEEEEC
Confidence 578999999999998754 23566678899985
No 42
>3cb6_A FACT complex subunit SPT16; peptidase homology domain, histone binding module, histone H chaperone, PITA-bread fold; 1.84A {Schizosaccharomyces pombe} PDB: 3cb5_A
Probab=95.32 E-value=0.2 Score=49.80 Aligned_cols=101 Identities=14% Similarity=0.205 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhh--ccc-chhhhhccccCcccceeecCCCcccCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQT--GNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g--~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~ 97 (394)
..|++-+++.+++..+++.++||++-.||...+.+.+.+.+ -.. |.. +..+.+-+.+++. +.+. .+.+
T Consensus 307 ~~~~~y~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~~~g~~~~~~h-------~~GHgiGl~~he~-p~~~-~~~~ 377 (444)
T 3cb6_A 307 EQQKNYSFLVALQKKLFEYCRDGAVIGDIYTKILGLIRAKRPDLEPNFVR-------NLGAGIGIEFRES-SLLV-NAKN 377 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHHHCGGGGGGBCS-------CCEEECSSSSCBG-GGCC-STTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHhhhhhhHhhccc-------ccccccCccccCC-cccc-CCCC
Confidence 46778888889999999999999999999999999998874 111 211 1122222222221 1111 1124
Q ss_pred CccccCCCEEEEEeeeE-E----------CceEEeEEEEEEeCC
Q 016129 98 ETVLQEGDMIKIDLGCH-I----------DGFIAVVAHTHVLQD 130 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~-~----------dGY~ad~aRT~~vG~ 130 (394)
+.+|++|-++.|..|.. . +++-.-+..|++|.+
T Consensus 378 ~~~l~~Gmv~tiEPgiy~~~~~~~~~~~~~~~gvriEd~v~vt~ 421 (444)
T 3cb6_A 378 PRVLQAGMTLNLSIGFGNLINPHPKNSQSKEYALLLIDTIQITR 421 (444)
T ss_dssp CCBCCTTCEEEEEEEEEEEECSSCCTTSCSEEEEEEEEEEECCS
T ss_pred CcccCCCCEEEEEeccccccCcccccccCCceEEEEEEEEEECC
Confidence 68999999999999986 3 357778899999963
No 43
>1wy2_A XAA-Pro dipeptidase; structural genomics, prolidase, riken structural genomics/PR initiative, RSGI, hydrolase; 1.70A {Pyrococcus horikoshii} PDB: 1pv9_A
Probab=95.26 E-value=0.11 Score=50.22 Aligned_cols=99 Identities=26% Similarity=0.283 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
..|++-+++.+++..+++.++||++-.||...+.+.+.+.|-.. |.. +..+.+-..+.+ .+...|. ++.
T Consensus 236 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~h-------~~GHgiGl~~hE-~p~i~~~--~~~ 305 (351)
T 1wy2_A 236 KQKEIYEIVLEAQKKAVESAKPGITAKELDSIARNIIAEYGYGEYFNH-------SLGHGVGLEVHE-WPRVSQY--DET 305 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCS-------CSEEECSSSSSE-EEEESTT--CCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcccCCC-------CcccccCCCcCC-CCccCCC--CCC
Confidence 45778888899999999999999999999999999998876432 211 111211111222 1111222 357
Q ss_pred cccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016129 100 VLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
+|++|.++.|+-|..+.| +-.-+..|++|.
T Consensus 306 ~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 336 (351)
T 1wy2_A 306 VLREGMVITIEPGIYIPKIGGVRIEDTILIT 336 (351)
T ss_dssp BCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CcCCCCEEEECCEEEeCCCCeEEEeeEEEEC
Confidence 899999999999998866 455566777773
No 44
>2zsg_A Aminopeptidase P, putative; hydrolase; 1.65A {Thermotoga maritima}
Probab=95.12 E-value=0.13 Score=49.65 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
..|++-+++.+++..+++.++||++-.||...+.+.+.+.|-.. |.. +..+.+-..+.+ .+...| .++.
T Consensus 242 ~~~~~~~~v~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~h-------~~GHgiGl~~he-~p~i~~--~~~~ 311 (359)
T 2zsg_A 242 EVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGH-------SLGHGIGLEVHE-GPAISF--RNDS 311 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBCS-------CSEEECSSSSSE-EEEEST--TCCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCcccCCC-------CCccccCcccCC-CCCcCC--CCCC
Confidence 46778888999999999999999999999999999998876432 211 111111111111 111112 2357
Q ss_pred cccCCCEEEEEeeeEECce-EEeEEEEEEeC
Q 016129 100 VLQEGDMIKIDLGCHIDGF-IAVVAHTHVLQ 129 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~~dGY-~ad~aRT~~vG 129 (394)
+|++|-++.|.-|..+.|+ -.-+..|++|.
T Consensus 312 ~l~~gmv~tiEPgiy~~~~~gvriEd~v~vt 342 (359)
T 2zsg_A 312 PLPENVVFTVEPGIYLEGKFGIRIEEDVVLK 342 (359)
T ss_dssp BCCTTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CcCCCCEEEECCEEEECCCcEEEEeeEEEEc
Confidence 8999999999999988774 56677888885
No 45
>4ege_A Dipeptidase PEPE; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 2.20A {Mycobacterium ulcerans}
Probab=95.05 E-value=0.13 Score=50.23 Aligned_cols=97 Identities=16% Similarity=0.217 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCCC--CCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPL--ASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~--~~~ 97 (394)
.+|++.+++.+++..+++.++||++-.||.+.+.+.+.+.|-.. |.. +..+.+-.. .|-.|. +.+
T Consensus 259 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~h-------~~GHgiGl~-----~hE~P~i~~~~ 326 (378)
T 4ege_A 259 DVAQQYSALQRAQRAAVDAVRPGVTAAQVDAAARDVLADAGLAEYFVH-------RTGHGIGLC-----VHEEPYIVAGN 326 (378)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGCCS-------CSEEECSSS-----SSEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCCcCCC-------CCcccCCCC-----cCCCCccCCCC
Confidence 46778888899999999999999999999999999998876432 211 111111111 132221 124
Q ss_pred CccccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
+.+|++|.++.|+-|..+.| +-.-+..|++|.
T Consensus 327 ~~~L~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 359 (378)
T 4ege_A 327 ELPLVAGMAFSIEPGIYFPGRWGARIEDIVVVT 359 (378)
T ss_dssp CCBCCTTBEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCccCCCCEEEECCEEEeCCccEEEEeeEEEEe
Confidence 67899999999999999877 456688899885
No 46
>1wn1_A Dipeptidase; prolidase, cobalt(II), structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; 2.25A {Pyrococcus horikoshii} PDB: 2how_A
Probab=95.05 E-value=0.11 Score=50.18 Aligned_cols=99 Identities=15% Similarity=0.202 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
..|++-+++.+++..+++.++||++-.||...+.+.+.+.|-.. |.. +..+.+-....+. +...|. ++.
T Consensus 239 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h-------~~GHgiGl~~he~-p~i~~~--~~~ 308 (356)
T 1wn1_A 239 RLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIH-------RTGHGLGLDVHEE-PYIGPD--GEV 308 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTSBHHHHHHHHHHHHHTTTCGGGCCS-------CSEEECSSSSSEE-EEESTT--CCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCCC-------CCcccCCCccCCC-cccCCC--CCC
Confidence 46778888889999999999999999999999999998876432 211 1111111111111 112222 357
Q ss_pred cccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016129 100 VLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
+|++|.++.|.-|..+.| +-.-+..|++|.
T Consensus 309 ~l~~Gmv~tiEPgiy~~g~~gvriEd~v~Vt 339 (356)
T 1wn1_A 309 ILKNGMTFTIEPGIYVPGLGGVRIEDDIVVD 339 (356)
T ss_dssp BCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CcCCCCEEEECCeeEeCCCcEEEEeeEEEEe
Confidence 899999999999998855 566678888885
No 47
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=94.99 E-value=0.14 Score=48.11 Aligned_cols=101 Identities=13% Similarity=0.126 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHH----HHh--hcccchhhhhccccCcccceeecCCC--cccCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFI----REQ--TGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFS 92 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i----~~~--g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~ 92 (394)
..|++-+++.++++.+++.++||++-.||...+.+.+ .+. |-..+... ...|+.. ...+ .+.++.
T Consensus 149 ~~~~~~~~v~~a~~~~i~~~kpG~~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~---~GHgiG~----~~hE~P~i~~~~ 221 (286)
T 3tav_A 149 SDEALSEATRLSMEAGIAAMIPGNRLTDVSHAIELGTRAAEKQFDRAFGIVDGY---GGHGIGR----SMHLDPFLPNEG 221 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHHHHHHHHHHHHHHTCCCEECTTC---CEEECSS----SSSEEEEECSSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhcCCCcccCCc---ccCcccc----cccCCccccCcC
Confidence 4567778888999999999999999999999999999 666 43222111 0011111 1111 122221
Q ss_pred CCCCCCccccCCCEEEEEeeeEEC------------------ceEEeEEEEEEeC
Q 016129 93 PLASDETVLQEGDMIKIDLGCHID------------------GFIAVVAHTHVLQ 129 (394)
Q Consensus 93 P~~~~~~~L~~GDvV~iDlG~~~d------------------GY~ad~aRT~~vG 129 (394)
. +.++.+|++|.++.|+.|.... +|-.-+..|++|.
T Consensus 222 ~-~~~~~~L~~GmV~tiEPgiy~~~~~~~~~~~~w~~~t~dg~~gvriEd~v~Vt 275 (286)
T 3tav_A 222 A-PGKGPLLAVGSVLAIEPMLTLGTTQTRVLADDWTVVTTDGSRAAHWEHTVAVT 275 (286)
T ss_dssp C-SSCSSBCCTTBEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEECC
T ss_pred C-CCCCCCcCCCCEEEEcCEEEcCCCceEecCCCceEEecCCCcEEEeeeEEEEC
Confidence 1 1246789999999999998752 3566778899885
No 48
>3s6b_A Methionine aminopeptidase; malaria, proteolysis, "PITA bread" fold, structur genomics, structural genomics consortium, SGC, hydrolase; 1.95A {Plasmodium falciparum}
Probab=94.48 E-value=0.15 Score=49.74 Aligned_cols=101 Identities=20% Similarity=0.314 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++-+++.+++..+++.++||++-.||.+.+.+.+.+.|-..|... ...|+. ....+ .+.||... .++
T Consensus 220 e~~~ly~~v~ea~~aai~~ikPG~~~~dI~~aa~~~i~~~G~~~~~~~---~GHGIG----~~vHE~P~i~~~~~~-~~~ 291 (368)
T 3s6b_A 220 EGKELVETCYFSLMEAIKKCKPGMFYKNIGTLIDAYVSKKNFSVVRSY---SGHGVG----KLFHSNPTVPHFKKN-KAV 291 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBTHHHHHHHHHHHHTTTCEECCSC---CEEECS----SSSSEEEEECSSSSC-CCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCcccce---eeCCCC----ccccCCCccccccCC-CCC
Confidence 456777888899999999999999999999999999988765433221 001111 11111 23343211 134
Q ss_pred ccccCCCEEEEEeeeEE-----------------Cc-eEEeEEEEEEeC
Q 016129 99 TVLQEGDMIKIDLGCHI-----------------DG-FIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~-----------------dG-Y~ad~aRT~~vG 129 (394)
.+|++|.++.|.-|... +| +-+-+..|++|.
T Consensus 292 ~~L~~GMVfTIEPgiy~~~~~~~~~~d~wt~~t~dG~~gvriEdtVlVT 340 (368)
T 3s6b_A 292 GIMKPGHVFTIEPMINQGHYSDVLWPDQWTSATSDGKLSAQFEHTLLIT 340 (368)
T ss_dssp CBCCTTCEEEECCEEESSCSCEEECTTSSCEEETTCCCEEECBEEEEEE
T ss_pred CEECCCCEEEEcCeEEcCcccccccCCCceeEeeCCccEEEEeEEEEEc
Confidence 68999999999988865 23 345577888885
No 49
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=94.38 E-value=0.17 Score=48.60 Aligned_cols=101 Identities=16% Similarity=0.215 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC--cccCCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN--TLCHFSPLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~--~~~H~~P~~~~~ 98 (394)
..|++.+++.+++..+++.++||++..||...+.+.+.+.|-..|... ...|+.. ...+ .+.||... ..+
T Consensus 189 ~~~~l~~~v~~a~~~ai~~~kPG~~~~dI~~~~~~~~~~~G~~~~~~~---~GHGIG~----~~HE~P~i~~~~~~-~~~ 260 (329)
T 2b3h_A 189 GARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSY---CGHGIHK----LFHTAPNVPHYAKN-KAV 260 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTTHHHHHHHHHHHHTTCEECCSC---CEEECSS----SSSEEEEECCSSSC-CCC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCCccCCc---ccCCcCc----ccccCCcccccccC-CCC
Confidence 456778888899999999999999999999999999988765433221 0011111 1110 12333221 113
Q ss_pred ccccCCCEEEEEeeeEE-----------------Cc-eEEeEEEEEEeC
Q 016129 99 TVLQEGDMIKIDLGCHI-----------------DG-FIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~-----------------dG-Y~ad~aRT~~vG 129 (394)
.+|++|.++.|.-|... +| +-+-+..|++|.
T Consensus 261 ~~L~~GMVftIEPgiy~~~~~~~~~~d~w~~~~~~G~~g~riEdtvlVT 309 (329)
T 2b3h_A 261 GVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVT 309 (329)
T ss_dssp CBCCTTCEEEECCEEESSCCCEEECTTSCCEEETTCCCEEECBEEEEEC
T ss_pred CEECCCCEEEEeCCcCcCcccccccCCCceeEeeCCeEEEEEeeEEEEc
Confidence 78999999999988863 23 456688899995
No 50
>3biq_A FACT complex subunit SPT16; PITA-bread, aminopeptidase, chromatin, replication, AC chromosomal protein, DNA damage, DNA repair; 1.73A {Saccharomyces cerevisiae} PDB: 3bip_A 3bit_A*
Probab=94.37 E-value=0.45 Score=47.59 Aligned_cols=100 Identities=13% Similarity=0.206 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCcHHHHHHHHHHHHHHhhc---ccchhhhhccccCcccceeecCCCcccCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSE-CKPGVKIVDLCEKGDSFIREQTG---NMYKNVKKKIERGVAFPSCVSVNNTLCHFSPLAS 96 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~-i~pG~te~el~~~~~~~i~~~g~---~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~ 96 (394)
..|++-.++.+++..+++. ++||++-.+|...+.+.+.+.|- ..|.. +..+.+-+.+++. +.. ..+.
T Consensus 314 ~~~~~~~~v~~a~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~g~~~~~~h-------~~GHgiGl~~hE~-p~~-~~~~ 384 (467)
T 3biq_A 314 EMANNYDFLLTLQKEIVTNILKPGRTPKEVYESVIEYIEKTKPELVPNFTK-------NIGSLIGLEFRDS-NFI-LNVK 384 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGGGGBCS-------CCEEECSSSSCCG-GGB-SSTT
T ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCcHHHHHHHHHHHHHHhCcchhhcCCC-------CcccccccccccC-Ccc-CCCC
Confidence 4677888888999999999 99999999999999999998751 11211 1112221222221 110 1112
Q ss_pred C-CccccCCCEEEEEeeeE-E-----C-ceEEeEEEEEEeC
Q 016129 97 D-ETVLQEGDMIKIDLGCH-I-----D-GFIAVVAHTHVLQ 129 (394)
Q Consensus 97 ~-~~~L~~GDvV~iDlG~~-~-----d-GY~ad~aRT~~vG 129 (394)
+ +.+|++|-++.|..|.. + + .|-.-+..|++|.
T Consensus 385 ~~~~~l~~Gmv~tiEPgiy~~~~~~~~g~~gvriEd~v~Vt 425 (467)
T 3biq_A 385 NDYRKIQRGDCFNISFGFNNLKDSQSANNYALQLADTVQIP 425 (467)
T ss_dssp CCSCCCCTTCEEEEEEEEEEECCSSCSSCEEEEEEEEEECC
T ss_pred CCCCccCCCCEEEEeCeEEeeecCCCCCccEEEEEEEEEEe
Confidence 4 67899999999999997 5 5 5777889999996
No 51
>4fkc_A XAA-Pro aminopeptidase; PITA-bread structure, prolidase, hydrolase; 2.60A {Thermococcus sibiricus}
Probab=94.36 E-value=0.19 Score=48.86 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceeecCCCcccCCCCCCCCCc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCVSVNNTLCHFSPLASDET 99 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~vs~n~~~~H~~P~~~~~~ 99 (394)
..|++-+++.++++.+++.++||++-.++...+.+.+.+.|-.. |.. +..+.+-+.+++ .+...|. ++.
T Consensus 260 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~g~~~~~~h-------~~GHgiGl~~hE-~P~i~~~--~~~ 329 (377)
T 4fkc_A 260 EVKKVYEIVKEAQETAVQKVAEGIPAEVVDATARGIISKYGYGEYFIH-------RTGHGLGIDVHE-EPYISPG--NKK 329 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHCBTTCBHHHHHHHHHHHHHHTTCTTTCCS-------CSEEECSSSSSE-EEEECSS--CCC
T ss_pred HHHHhhhhhHHHHHHHHHhhcCCcchhhhHHHHHHHHHHhcccccCCC-------CCeEeCCCcccc-CCcccCC--CCC
Confidence 45677778888999999999999999999999999998876432 211 111211111221 1122332 467
Q ss_pred cccCCCEEEEEeeeEECce-EEeEEEEEEeC
Q 016129 100 VLQEGDMIKIDLGCHIDGF-IAVVAHTHVLQ 129 (394)
Q Consensus 100 ~L~~GDvV~iDlG~~~dGY-~ad~aRT~~vG 129 (394)
+|++|-++.|.-|..+.|. -.-+..|++|.
T Consensus 330 ~L~~Gmv~tiEPgiy~~g~~GvriEd~v~Vt 360 (377)
T 4fkc_A 330 ILKDGMVFTIEPGIYLQGKFGVRIEDDVALV 360 (377)
T ss_dssp BCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred EeCCCCEEEECCeeEECCccEEEEccEEEEE
Confidence 8999999999999988774 34456678774
No 52
>2v3z_A XAA-Pro aminopeptidase; 'PITA-bread' enzyme, proline- specific enzyme, aminopeptidas manganese enzyme, protease, manganese; HET: CSO; 1.56A {Escherichia coli} SCOP: c.55.2.1 d.127.1.1 PDB: 2bwy_A* 1wl9_A 1m35_A 1n51_A* 1w2m_A 1a16_A 1wbq_A 1wl6_A* 1w7v_A 1wlr_A* 2bh3_A* 2bha_A* 2bhb_A* 2bhc_A* 2bhd_A* 2bn7_A* 1jaw_A 2bwt_A* 2bwu_A* 2bww_A* ...
Probab=93.98 E-value=0.37 Score=47.99 Aligned_cols=103 Identities=13% Similarity=0.185 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHh----hcc-----------cchhhhhccccCcccceeecCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQ----TGN-----------MYKNVKKKIERGVAFPSCVSVN 85 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~----g~~-----------~f~~~~~~~~~g~afp~~vs~n 85 (394)
..|++-.++.+++..+++.++||++-.||...+.+.+.+. |-. .|... ...|+.+.+-+.++
T Consensus 285 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~l~~~G~~~g~~~~~~~~~~~~~~---~~Hg~GHgiGl~~h 361 (440)
T 2v3z_A 285 AQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPF---FMHGLSHWLGLDVH 361 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHHHHHHHHHHHHTSSCSCHHHHHHTTTTTTT---CCSCSCCBCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhhhhccCcccCchhhhhhhhccccc---cCCCCCCcCCcccc
Confidence 4567778888999999999999999999999988888652 110 00000 00111221111122
Q ss_pred CcccCCCCCCCCCccccCCCEEEEEeeeEEC----------ceEEeEEEEEEeC
Q 016129 86 NTLCHFSPLASDETVLQEGDMIKIDLGCHID----------GFIAVVAHTHVLQ 129 (394)
Q Consensus 86 ~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~d----------GY~ad~aRT~~vG 129 (394)
+ .+++.|. ++.+|++|-++.|.-|..+. ||-.-+..|++|.
T Consensus 362 e-~p~~~~~--~~~~L~~Gmv~tiEPgiy~~~~~~~~~~~~~~GvriEd~vlVt 412 (440)
T 2v3z_A 362 D-VGVYGQD--RSRILEPGMVLTVAPGLYIAPDAEVPEQYRGIGIRIEDDIVIT 412 (440)
T ss_dssp C-CSCCCGG--GCCCCCTTCEEEECCEEEECTTCSSCGGGTTEEEECBEEEEEE
T ss_pred c-CCCcCCC--CCCccCCCCEEEECCEEEeCCccccccccceeEEEEeeEEEEC
Confidence 1 2233232 35789999999999999887 5778888899995
No 53
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=93.65 E-value=0.27 Score=47.21 Aligned_cols=87 Identities=15% Similarity=0.242 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccC-CceecccCCCCCCCCCcee
Q 016129 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDG-NKVVLSVSNPDTRVDDAEF 214 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~-p~~I~~~~~~~~~~~~~~l 214 (394)
..+++.+.+.++++.+++.+|||++-.||...+.+.+.++|..... ..+++....+--+ ...++... .++..|
T Consensus 71 ~mR~A~~i~~~a~~~~~~~ikpG~te~el~~~~~~~~~~~g~~~~~-~~~~~fp~iv~~g~n~~~~H~~-----~~~~~l 144 (337)
T 4fuk_A 71 RIKTVCQLSREVLDIATAAAKPGITTDELDRIVHEATVERNMYPSP-LNYYGFPKSVCTSVNEVICHGI-----PDSREL 144 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEETT-TTGGGCCSSSEEEETTEEECCC-----CCSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCccC-CCCCCcCceeeccccccccCCC-----CCCccc
Confidence 4566777788999999999999999999999999999999874311 1111111110000 00111111 145789
Q ss_pred eCCcEEEEceeeec
Q 016129 215 EENEVYAVDIVTST 228 (394)
Q Consensus 215 e~GmV~aIEp~is~ 228 (394)
++|+++.||.+..-
T Consensus 145 ~~GD~v~iD~g~~~ 158 (337)
T 4fuk_A 145 EEGDILNIDVSSYL 158 (337)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCCCEEEEecceeE
Confidence 99999999998863
No 54
>3ig4_A XAA-Pro aminopeptidase; csgid, hydrolase, struct genomics, center for structural genomics of infectious DISE; HET: SO4; 2.89A {Bacillus anthracis}
Probab=93.35 E-value=0.64 Score=46.18 Aligned_cols=105 Identities=20% Similarity=0.195 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhccc-chhhhhccccCcccceee--cCCCcccCCCCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNM-YKNVKKKIERGVAFPSCV--SVNNTLCHFSPLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~-f~~~~~~~~~g~afp~~v--s~n~~~~H~~P~~~~ 97 (394)
..|++-+++.++.+.+++.++||++-.||...+.+.+.+.+... |.... .+. +--|+-.+ +.. .-.|-.|. ..
T Consensus 281 ~~~~~y~~vl~a~~~~i~~~kpG~~~~di~~~a~~~i~~~~~~~G~~~~~-~~~-~~~~~Hg~GH~iG-l~vhe~~~-~~ 356 (427)
T 3ig4_A 281 RQKQIYNIVLNALKETTEIIKPGLKFAALNEHAKKVLAEGCKAVGLIQED-EEL-SKYYYHGVSHFLG-LDTHDVGT-YK 356 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBTHHHHHHHHHHHHHHHHHHTSCSSG-GGG-GGTCCSCSCCBCS-SSSSCCCC-CT
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHhHhhcCCccCc-chh-hccCCCCCCCcCC-cCCCcCCC-CC
Confidence 45677788899999999999999999999999999888763210 10000 000 00122111 111 11354443 24
Q ss_pred CccccCCCEEEEEeeeEEC--ceEEeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHID--GFIAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d--GY~ad~aRT~~vG 129 (394)
+++|++|-++.|.-|..+. ||-.-+..|++|.
T Consensus 357 ~~~L~~GMV~tiEPgiy~~~~g~GvriEd~vlVt 390 (427)
T 3ig4_A 357 DRVLEEGMVITIEPGLYIEEESIGIRIEDDILVT 390 (427)
T ss_dssp TCBCCTTCEEEECCEEEEGGGTEEEECBEEEEEC
T ss_pred CCEeCCCCEEEECCEEEECCCceEEEEeeEEEEe
Confidence 6899999999999999875 5667788999995
No 55
>1kp0_A Creatine amidinohydrolase; alpha betal, 3-layer(ABA) sandwich; 2.70A {Actinobacillus} SCOP: c.55.2.1 d.127.1.1
Probab=92.67 E-value=0.94 Score=44.17 Aligned_cols=102 Identities=14% Similarity=0.062 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCC---CCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFS---PLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~---P~~~~ 97 (394)
..|++-+++.+++..+++.++||++-.||.+.+.+.+.+.|-..+.. .+..+.+-..+++ .+|+. ....+
T Consensus 272 ~~~~~~~~v~~a~~~~~~~~~pG~~~~~i~~~~~~~~~~~G~~~~~~------~~~GHgiG~~~He-~~~~~g~~~~~~~ 344 (402)
T 1kp0_A 272 ASLZIWZKNTAVHRRGLZLIKPGARCKDIASELNBMYRZWDLLRYRT------FGYGHSFGVLBHY-YGREAGVELREDI 344 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCGGGBC------SCSCBBCEEEETT-EECCTTCBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCeecC------CCcccccCCcccc-CCcccCcccCCCC
Confidence 45778888899999999999999999999999999998876433211 1112221111111 12211 01123
Q ss_pred CccccCCCEEEEEeeeEEC----ceE-EeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHID----GFI-AVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d----GY~-ad~aRT~~vG 129 (394)
+.+|++|.++.|+-|..+. |.. .-+.-+++|.
T Consensus 345 ~~~l~~Gmv~tiEPgiy~~~~~~~~~G~ried~v~Vt 381 (402)
T 1kp0_A 345 ZTVLEPGMVVSMEPMVMBPEGEPGAGGYREHDILVIK 381 (402)
T ss_dssp CCBCCTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCccCCCcEEEECCceeecCccCCCCcEEEEEEEEEc
Confidence 5789999999999999876 532 2344555563
No 56
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=92.67 E-value=0.45 Score=44.82 Aligned_cols=82 Identities=18% Similarity=0.224 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccccccccccCCceecc-cCCCCCCCCCcee
Q 016129 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQLKQFVIDGNKVVLS-VSNPDTRVDDAEF 214 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~I~~-~~~~~~~~~~~~l 214 (394)
..+++.+.+..+++.+.+.++||++-.||...++..+.+.|..+ .|. -.++. .. .++. .|+. .++.+|
T Consensus 5 ~mr~A~~i~~~~l~~~~~~i~pG~te~el~~~~~~~~~~~G~~~--~fp-~~vs~----n~-~~~H~~p~~---~~~~~L 73 (295)
T 1xgs_A 5 KLMKAGEIAKKVREKAIKLARPGMLLLELAESIEKMIMELGGKP--AFP-VNLSI----NE-IAAHYTPYK---GDTTVL 73 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHTTCEE--SSC-CEEEE----TT-EEECCCCCT---TCCCBC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHcCCCC--CCC-cEEee----CC-ccccccCCC---CCCccc
Confidence 45677788888999999999999999999999999999998753 110 01111 01 1111 1211 135789
Q ss_pred eCCcEEEEceeeec
Q 016129 215 EENEVYAVDIVTST 228 (394)
Q Consensus 215 e~GmV~aIEp~is~ 228 (394)
++|+++.||.+..-
T Consensus 74 ~~GDiv~iD~G~~~ 87 (295)
T 1xgs_A 74 KEGDYLKIDVGVHI 87 (295)
T ss_dssp CTTCEEEEEEEEEE
T ss_pred cCCCEEEEEEeEEE
Confidence 99999999999863
No 57
>1b6a_A Methionine aminopeptidase; angiogenesis inhibitor; HET: TN4; 1.60A {Homo sapiens} SCOP: a.4.5.25 d.127.1.1 PDB: 1qzy_A* 1boa_A* 1kq0_A 1kq9_A 1bn5_A* 1b59_A* 1yw9_A* 1r5g_A* 1r5h_A* 1r58_A* 1yw8_A* 1yw7_A* 2adu_A* 2ea2_A* 2ea4_A* 2ga2_A* 2oaz_A*
Probab=92.60 E-value=0.32 Score=49.00 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcc---------cchhhhhccccCcccce-eecCCC--cc
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGN---------MYKNVKKKIERGVAFPS-CVSVNN--TL 88 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~---------~f~~~~~~~~~g~afp~-~vs~n~--~~ 88 (394)
.+++..+++.+++..+++.++||++..||...+.+.+.+.|-. .|.. ...+.+ ....++ .+
T Consensus 272 e~~~L~eav~eA~~aaI~~~kPG~~~~dI~~ai~~~i~~~G~~l~g~~~~~~~v~h-------~~GHGIGGl~iHE~P~v 344 (478)
T 1b6a_A 272 KYDTLLKAVKDATNTGIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRN-------LNGHSIGQYRIHAGKTV 344 (478)
T ss_dssp GGHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHTCEEEETTEEEECEECTT-------CEEEEEBTTBSCCSCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCcccccccceeecC-------cceeCCCCccccCCCcc
Confidence 5677888899999999999999999999999999999887632 1111 111111 011222 14
Q ss_pred cCCCCCCCCCccccCCCEEEEEeeeEE
Q 016129 89 CHFSPLASDETVLQEGDMIKIDLGCHI 115 (394)
Q Consensus 89 ~H~~P~~~~~~~L~~GDvV~iDlG~~~ 115 (394)
+|+.|. ++.+|++|.++.|+.++..
T Consensus 345 P~~~~~--~~~~Le~GMVftIEP~i~~ 369 (478)
T 1b6a_A 345 PIVKGG--EATRMEEGEVYAIETFGST 369 (478)
T ss_dssp ESSSSC--CCCBCCTTCEEEEEEEEES
T ss_pred ceecCC--CCCEeCCCCEEEEeCeeEC
Confidence 566543 4678999999999998764
No 58
>2nw5_A Methionine aminopeptidase 2; metap2, structural genomics, PSI-2, protein structure initiative; 2.18A {Encephalitozoon cuniculi} PDB: 3cmk_A* 3d0d_A* 3fm3_A 3fmq_A* 3fmr_A*
Probab=92.52 E-value=0.51 Score=45.85 Aligned_cols=84 Identities=18% Similarity=0.192 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHHHHCCCccccCccccc--cccccccCCceecc-cCCCCCCCC-C
Q 016129 136 RAADVIAAANTAAEVALRLVRPGKKNKDVTEAIQKVAAAHDCKIVEGVLSHQ--LKQFVIDGNKVVLS-VSNPDTRVD-D 211 (394)
Q Consensus 136 ~~~~l~~a~~~a~~a~i~~lkPG~~~~dV~~ai~~~~~~~G~~~~~~~~GHg--iG~~~~e~p~~I~~-~~~~~~~~~-~ 211 (394)
..+++.+.+..+++.+.+.++||++-.||...++..+.+.|........++. +|.+ . .++. .|+. ++ +
T Consensus 49 ~mR~A~~I~~~a~~~~~~~ikpG~te~El~~~ie~~~~~~g~~~~~~~~aFpt~~s~N----~-~~~H~~P~~---~d~~ 120 (360)
T 2nw5_A 49 DARRAAEAHRRARYRVQSIVRPGITLLEIVRSIEDSTRTLLKGERNNGIGFPAGMSMN----S-CAAHYTVNP---GEQD 120 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTTTSGGGGEEEEEEEEET----T-EEECCCCCT---TCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHhcCCCccCccccCceeecc----c-cccCCCCCc---ccCC
Confidence 3455666677788888899999999999999999998887643210001111 1111 0 1111 1211 12 5
Q ss_pred ceeeCCcEEEEceeee
Q 016129 212 AEFEENEVYAVDIVTS 227 (394)
Q Consensus 212 ~~le~GmV~aIEp~is 227 (394)
.+|++|+++.||.++.
T Consensus 121 ~~L~~GDlV~ID~G~~ 136 (360)
T 2nw5_A 121 IVLKEDDVLKIDFGTH 136 (360)
T ss_dssp CBCCTTCEEEEEEEEE
T ss_pred cCcCCCCEEEEEEEEE
Confidence 7999999999999886
No 59
>2q8k_A Proliferation-associated protein 2G4; EBP1, PA2G4, methionine aminopeptidase, PITA-bread, transcri; 1.60A {Homo sapiens} PDB: 2v6c_A
Probab=91.51 E-value=0.58 Score=46.09 Aligned_cols=92 Identities=7% Similarity=0.056 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCC---CCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFS---PLASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~---P~~~~ 97 (394)
..++..+++.+++..+++.++||++..||...+++.+.+.|-..+... ...|+..-.-=++...+.++. +...+
T Consensus 145 ~~~~l~~~~~~a~~~~i~~~kPG~~~~dI~~ai~~~~~~~G~~~v~~~---~GHGIG~~~HE~P~~i~~~~~~~~~~~~~ 221 (401)
T 2q8k_A 145 RKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGM---LSHQLKQHVIDGEKTIIQNPTDQQKKDHE 221 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCBHHHHHHHHHHHHHTTTCEECTTC---EEEEEBTTBSSCSCEEESSCCHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeecCCc---ccccCCCccccCCcccccCCCcccccCCC
Confidence 456777888899999999999999999999999999988765432211 001111000000000111211 00012
Q ss_pred CccccCCCEEEEEeeeEE
Q 016129 98 ETVLQEGDMIKIDLGCHI 115 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~ 115 (394)
+..|++|.++.|+.++..
T Consensus 222 ~~~L~~GmV~tIEP~i~~ 239 (401)
T 2q8k_A 222 KAEFEVHEVYAVDVLVSS 239 (401)
T ss_dssp CCBCCTTCEEEEEEEEES
T ss_pred CCEeCCCCEEEEeCceEe
Confidence 568999999999999874
No 60
>1chm_A Creatine amidinohydrolase; creatinase; 1.90A {Pseudomonas putida} SCOP: c.55.2.1 d.127.1.1
Probab=91.14 E-value=1.6 Score=42.56 Aligned_cols=102 Identities=11% Similarity=0.071 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCCC---CCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFSP---LASD 97 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~P---~~~~ 97 (394)
..|++-+++.+++..+++.++||++-.||.+.+.+.+.+.|-..|.. .+..+.+-...++ .+|+.+ ...+
T Consensus 272 ~~~~~y~~v~~a~~~~i~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~------~~~GHgiG~~~h~-~~~~~g~~~~~~~ 344 (401)
T 1chm_A 272 DHLRLWQVNVEVHEAGLKLIKPGARCSDIARELNEIFLKHDVLQYRT------FGYGHSFGTLSHY-YGREAGLELREDI 344 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHHHTCGGGBC------SCSCBBCSBEETT-EECCTTSBCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccC------CCCCcccCccCCc-cccccCccccCCC
Confidence 45778888899999999999999999999999999998876433211 0111211111111 112110 1123
Q ss_pred CccccCCCEEEEEeeeEEC----ce-EEeEEEEEEeC
Q 016129 98 ETVLQEGDMIKIDLGCHID----GF-IAVVAHTHVLQ 129 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~d----GY-~ad~aRT~~vG 129 (394)
+.+|++|-++.|.-|..+. |. -.-+.-+++|.
T Consensus 345 ~~~L~~Gmv~tiEPgiy~~~~~~g~~GvriEd~vlVt 381 (401)
T 1chm_A 345 DTVLEPGMVVSMEPMIMLPEGLPGAGGYREHDILIVN 381 (401)
T ss_dssp CCBCCTTCEEEECCEEEECTTSTTCEEEECBEEEEEE
T ss_pred CCccCCCCEEEEcCeeeeccccCCCCeEEEeeeEEEC
Confidence 5789999999999999875 43 23345556563
No 61
>3rva_A Organophosphorus acid anhydrolase; PITA-bread fold, binuclea center, BI-functional, prolidase, nerve agents, XAA-Pro DIP hydrolase; 1.80A {Alteromonas macleodii}
Probab=90.11 E-value=2 Score=42.82 Aligned_cols=38 Identities=21% Similarity=0.284 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIR 58 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~ 58 (394)
..++.-+++.++...+++.++||++-.||...+.+.+.
T Consensus 270 ~~~~ly~~vl~aq~aai~~ikPG~~~~di~~aa~~~i~ 307 (451)
T 3rva_A 270 MFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIA 307 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 34577788999999999999999999999999888775
No 62
>4b28_A Metallopeptidase, family M24, putative; lyase, imethylsulfonioproionate, acrylate, dimethylsulfide; 2.15A {Roseobacter denitrificans och 114}
Probab=88.20 E-value=0.74 Score=46.32 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCCcccCCC--CCCCCC
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNNTLCHFS--PLASDE 98 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~~~~H~~--P~~~~~ 98 (394)
.+|++-+++.+++..+++.++||++-.||...+.+.+.+.+...|.. ...|+.. +- ....+.|+. +...++
T Consensus 345 ~~~~~y~~v~~a~~a~i~~ikpG~~~~di~~~ar~~i~~~~~~~~~~----~GHGIGl--~H-E~P~i~~~~~~~~~~~~ 417 (470)
T 4b28_A 345 DMIYAMQHGVEHIRTNMEMLKPGVMIPELSANTHVLDAKFQKQKYGC----LMHGVGL--CD-EWPLVAYPDHAVAGAYD 417 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTCBHHHHHHTCCCCCHHHHTTCCSC----SEEEESS--SE-EEEEECCTTTCCTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhhhcCCCC----ccCCCCc--CC-CCCcccCccccccCCCC
Confidence 46778888999999999999999999999998877666543221211 0112111 00 000111110 001235
Q ss_pred ccccCCCEEEEEeeeEE-Cc-eEEeEEEEEEeC
Q 016129 99 TVLQEGDMIKIDLGCHI-DG-FIAVVAHTHVLQ 129 (394)
Q Consensus 99 ~~L~~GDvV~iDlG~~~-dG-Y~ad~aRT~~vG 129 (394)
.+|++|-++.|.-|... +| |-.-+..|++|.
T Consensus 418 ~~L~~GMV~tiEPgiy~~~g~~GvriEd~vlVt 450 (470)
T 4b28_A 418 YPLEPGMTLCVEALISEEGGDFSIKLEDQVLIT 450 (470)
T ss_dssp CBCCTTCEEEEEEEEECTTCSCEEEEEEEEEEC
T ss_pred CEECCCCEEEEcCeeecCCCcEEEEEeeEEEEe
Confidence 78999999999998876 44 677899999995
No 63
>2iw2_A XAA-Pro dipeptidase; metallocarboxypeptidase, disease mutation, XAA-Pro dipeptida dipeptidase, peptidase D, collagen degradation; 1.82A {Homo sapiens} PDB: 2okn_A
Probab=87.92 E-value=3.3 Score=41.69 Aligned_cols=39 Identities=26% Similarity=0.265 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHH
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIRE 59 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~~ 59 (394)
..|+.-+++.++++.+++.++||++-.||...+.+.+.+
T Consensus 302 ~q~~~y~~v~~a~~~~i~~~kpG~~~~di~~~a~~~i~~ 340 (494)
T 2iw2_A 302 DQKAVYEAVLRSSRAVMGAMKPGVWWPDMHRLADRIHLE 340 (494)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence 456777888899999999999999999999999888765
No 64
>3l24_A XAA-Pro dipeptidase; PITA-bread, detoxification, hydrolase, manganese, metal-binding, metalloprotease, protease; 2.30A {Alteromonas SP} PDB: 3l7g_A*
Probab=85.04 E-value=4.8 Score=40.84 Aligned_cols=38 Identities=8% Similarity=0.107 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHH
Q 016129 21 KYKSAAEIANKALQLVVSECKPGVKIVDLCEKGDSFIR 58 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~pG~te~el~~~~~~~i~ 58 (394)
.+++.-+++.++.+.+++.++||++..||...+.+.+.
T Consensus 267 e~~~ly~~vl~Aq~aai~~ikPGv~~~dI~~aa~~~i~ 304 (517)
T 3l24_A 267 EFAELVATMKQHQIALMNQLAPGKLYGELHLDCHQRVA 304 (517)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 35677788999999999999999999999999887765
No 65
>3ctz_A XAA-Pro aminopeptidase 1; PITA-bread fold, alternative splicing, cytoplasm, hydrolase, manganese, metal-binding, metalloprotease, protease; HET: P6G; 1.60A {Homo sapiens}
Probab=80.66 E-value=2.5 Score=44.02 Aligned_cols=97 Identities=20% Similarity=0.158 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccC-CCcHHHHHHHHHHHHHHhhcccchhhhhccccCcccceeecCCC-cccCCCCC---C
Q 016129 21 KYKSAAEIANKALQLVVSECKP-GVKIVDLCEKGDSFIREQTGNMYKNVKKKIERGVAFPSCVSVNN-TLCHFSPL---A 95 (394)
Q Consensus 21 ~~R~Aa~Ia~~~l~~v~~~i~p-G~te~el~~~~~~~i~~~g~~~f~~~~~~~~~g~afp~~vs~n~-~~~H~~P~---~ 95 (394)
..|++-.++-+++..+++.++| |++-.+|...+.+.+.+.|-. |.. +.++ ++.. .-.|-.|. .
T Consensus 439 ~~~~~y~~vl~a~~~~~~~~~p~G~~~~~id~~ar~~l~~~G~~-~~h-------~~GH----gvG~~l~vHE~P~~i~~ 506 (623)
T 3ctz_A 439 YEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGLD-YLH-------GTGH----GVGSFLNVHEGPCGISY 506 (623)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEETTCBGGGGGGGGTHHHHHTTCC-CSS-------CSEE----BCCSSSCSSCCSCEECT
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHhCCC-CCC-------Cccc----cCCCCCCCCCCCccCCC
Confidence 4567788888999999999999 999999999988888877542 211 1111 1111 01222221 0
Q ss_pred --CCCccccCCCEEEEEeeeEECc-eEEeEEEEEEeC
Q 016129 96 --SDETVLQEGDMIKIDLGCHIDG-FIAVVAHTHVLQ 129 (394)
Q Consensus 96 --~~~~~L~~GDvV~iDlG~~~dG-Y~ad~aRT~~vG 129 (394)
.++.+|++|-++.+.-|...+| |-.-+..+++|.
T Consensus 507 ~~~~~~~L~~GMv~tiEPGiy~~g~~GiRiEd~vlVt 543 (623)
T 3ctz_A 507 KTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLVV 543 (623)
T ss_dssp TCSCSCBCCTTCEEEECCEEEETTTEEEECBEEEEEE
T ss_pred CCCCCCccCCCeEEEEeCcEEECCceEEEEeeEEEEe
Confidence 1357899999999999998876 555666777773
No 66
>4b6a_t Probable metalloprotease ARX1; large ribosomal subunit, ribosome biogenesis, ribosome matur factor, ribosome; 8.10A {Saccharomyces cerevisiae}
Probab=58.74 E-value=88 Score=32.18 Aligned_cols=41 Identities=10% Similarity=0.019 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHc---------CCCCChhHHHHHHHHHHHHC
Q 016129 135 GRAADVIAAANTAAEVALRLV---------RPGKKNKDVTEAIQKVAAAH 175 (394)
Q Consensus 135 ~~~~~l~~a~~~a~~a~i~~l---------kPG~~~~dV~~ai~~~~~~~ 175 (394)
.+++.+-+.+..++..++.++ +||++..||.....+.+.+.
T Consensus 47 tKYr~AgeIa~~vLk~v~~li~~G~~~~~~kpga~I~ELCe~GD~~I~e~ 96 (614)
T 4b6a_t 47 NKYRTAGQIAQTALKYVTSLINDSYHSKTTQRQLTVPELCLLTDSFILTR 96 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHTTCCCBTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccCCCCcHHHHHHHHHHHHHHH
Confidence 355566666677777777665 67788899988777777653
No 67
>1g6p_A Cold shock protein TMCSP; greek-KEY, beta barrel, OB-fold, structural genomics; NMR {Thermotoga maritima} SCOP: b.40.4.5
Probab=46.17 E-value=40 Score=23.77 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=33.5
Q ss_pred cCcccceeecCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016129 74 RGVAFPSCVSVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~vs~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-..-...+...|++....+. +.|++||.|.+++.---.|+.|
T Consensus 12 kGfGFI~~~~g~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~~G~~A 59 (66)
T 1g6p_A 12 KGYGFITKDEGGDVFVHWSAIEMEGFKTLKEGQVVEFEIQEGKKGPQA 59 (66)
T ss_dssp TTEEEEEETTSCBCBBCSSSSCCSSCCCCCSSSEEEEEEECSSSCCEE
T ss_pred CCEEEEecCCCceEEEEhHHccccCCCCCCCCCEEEEEEEECCCCCEE
Confidence 5666643334477888998875444 6899999999999766677544
No 68
>1xee_A Chemotaxis-inhibiting protein chips; chemotaxis inhibitory protein, superantigen, C5A, immune system; NMR {Staphylococcus aureus} PDB: 2k3u_A*
Probab=36.94 E-value=17 Score=26.07 Aligned_cols=24 Identities=21% Similarity=0.142 Sum_probs=16.4
Q ss_pred eeEEEEEEEEEcCCC--ceeecCCCC
Q 016129 311 YVAHIKFTVLLMPNG--SDRITSHTL 334 (394)
Q Consensus 311 ~~aq~e~Tvlvt~~G--~~~lT~~~~ 334 (394)
-+||||-.|++|+|- ..+.-..|.
T Consensus 25 nsaqfekmviltenkgyytvylntpl 50 (91)
T 1xee_A 25 NSAQFEKMVILTENKGYYTVYLNTPL 50 (91)
T ss_dssp CGGGEEEEEEEESTTCEEEEESSSCC
T ss_pred chhhheeeEEEecCCceEEEEecCcc
Confidence 459999999999875 233334443
No 69
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=32.10 E-value=36 Score=24.41 Aligned_cols=47 Identities=21% Similarity=0.420 Sum_probs=32.8
Q ss_pred cCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016129 74 RGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-..- +..+...|.+....+. +.|++||.|.+++...-.|..|
T Consensus 17 kGfGFI~~~~g~~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~kG~~A 65 (71)
T 3i2z_B 17 KGFGFITPEDGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKGPSA 65 (71)
T ss_dssp TTEEEEEETTCCCCEEEEGGGBCCSSCCCCCTTCEEEEEEEEETTEEEE
T ss_pred CCcEEEecCCCCccEEEEhHHcccccCcCCCCCCEEEEEEEECCCCCEe
Confidence 566664333 3467788988764333 4799999999999877777644
No 70
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=31.12 E-value=28 Score=24.76 Aligned_cols=46 Identities=22% Similarity=0.376 Sum_probs=32.9
Q ss_pred cCcccceee-cCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceE
Q 016129 74 RGVAFPSCV-SVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFI 119 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~ 119 (394)
+|+.|-..- +..+...|++....+. +.|++||.|.+++.-.-.|..
T Consensus 13 kGfGFI~~~~gg~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~kG~~ 60 (67)
T 3cam_A 13 KGFGFITPDEGGEDLFAHFSAINMEGFKTLKEGQRVSFDVTTGPKGKQ 60 (67)
T ss_dssp TTEEEEEETTSCCCEEEEGGGBCGGGGSSCCTTCEEEEEEEEETTEEE
T ss_pred CCeEEEecCCCCccEEEEHHHccccCCCCCCCCCEEEEEEEECCCCcc
Confidence 566664433 3567888998764333 689999999999987667764
No 71
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=31.07 E-value=48 Score=23.89 Aligned_cols=47 Identities=21% Similarity=0.400 Sum_probs=32.7
Q ss_pred cCcccceeecCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEE--CceEE
Q 016129 74 RGVAFPSCVSVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHI--DGFIA 120 (394)
Q Consensus 74 ~g~afp~~vs~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~--dGY~a 120 (394)
+|+.|-+.-...+...|++....+. +.|.+||.|.+++...- .|+.+
T Consensus 13 kGfGFI~~~~g~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~~~kG~~A 62 (73)
T 3a0j_A 13 KGYGFIEREGDTDVFVHYTAINAKGFRTLNEGDIVTFDVEPGRNGKGPQA 62 (73)
T ss_dssp TTEEEEECTTSCCEEEEGGGBCSSSCSSCCTTCEEEEEEECCSCCSSSEE
T ss_pred CCEEEEecCCCCcEEEEhhhccccCCCCCCCCCEEEEEEEECCCCCCCEE
Confidence 5666643333377888998774333 57999999999997665 67544
No 72
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.39 E-value=38 Score=24.56 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=15.4
Q ss_pred HHHHHHHhhCCCCcccc
Q 016129 261 FIFSEINQKFPIMPFTA 277 (394)
Q Consensus 261 ~~~~~i~~~~~~~pf~~ 277 (394)
++|.++..+||..|=..
T Consensus 12 qvfheLkQrFPEvPd~V 28 (75)
T 2dae_A 12 QVLHDLRQKFPEVPEVV 28 (75)
T ss_dssp HHHHHHHHHSSSSCHHH
T ss_pred HHHHHHHHhcccCcHHH
Confidence 68999999999999765
No 73
>2ytx_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=26.29 E-value=43 Score=25.66 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=31.8
Q ss_pred cCcccceee-cCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEE
Q 016129 74 RGVAFPSCV-SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-..- +..+...|++....+.+.|++||.|.+++.-.-.|+.+
T Consensus 28 KGfGFI~~ddg~~DvFvH~s~i~~~~~~L~~G~~V~F~v~~~~~g~~A 75 (97)
T 2ytx_A 28 EAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKEVA 75 (97)
T ss_dssp SSEEEEECSSSCCCEEEETTTCCSCTTSCCSCCEEEEEECCCSSSCBE
T ss_pred CCceEEecCCCCceEEEEehHhccccCCCCCCCEEEEEEEcCCCCcEE
Confidence 466664433 34678899988754446899999999999643344433
No 74
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=25.93 E-value=43 Score=27.00 Aligned_cols=51 Identities=16% Similarity=0.192 Sum_probs=34.8
Q ss_pred CccccCCCEEEEEeeeEE-CceEEeEE------EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 016129 98 ETVLQEGDMIKIDLGCHI-DGFIAVVA------HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGK 159 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~-dGY~ad~a------RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~ 159 (394)
.+.++.||.|.|+.-+.. +|-.-|.+ .+|.+|.+.+ ...++.++..+++|-
T Consensus 40 G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~v-----------i~G~eeaL~gmk~Ge 97 (133)
T 2y78_A 40 GAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMV-----------IKGWDEGVQGMKVGG 97 (133)
T ss_dssp SCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSS-----------CHHHHHHSTTCBTTC
T ss_pred CCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCCh-----------hHHHHHHHcCCCCCC
Confidence 457889999999988876 78666654 4677774322 335566666667763
No 75
>3l9k_W Dynein intermediate chain, cytosolic; LC7, light chain 7, KM23, RO hydrolase, alternative splicing, lysosome, membrane; 3.00A {Drosophila melanogaster}
Probab=25.68 E-value=1.3e+02 Score=18.96 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=26.2
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Q 016129 6 REEKELDLTSPEVVTKYKSAAEIANKALQL 35 (394)
Q Consensus 6 ~~~~~~~vKs~~EI~~~R~Aa~Ia~~~l~~ 35 (394)
++|+.....+++=++-+-+++++..+||..
T Consensus 3 eEEk~~I~~S~~F~~F~~rsskviERAL~e 32 (38)
T 3l9k_W 3 EEQKQMIILSENFQRFVVRAGRVIERALSE 32 (38)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHcc
Confidence 457888899999999999999999999853
No 76
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=25.42 E-value=1e+02 Score=25.63 Aligned_cols=50 Identities=18% Similarity=0.280 Sum_probs=36.8
Q ss_pred ccCCCEEEEEeeeEECceEEeEE-------------------EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016129 101 LQEGDMIKIDLGCHIDGFIAVVA-------------------HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKN 161 (394)
Q Consensus 101 L~~GDvV~iDlG~~~dGY~ad~a-------------------RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~ 161 (394)
+++||.|.|+.-+..+|-.-|.+ .+|.+|.+. +...++.++.-+++|-+.
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~-----------vi~G~eeaL~gm~~Ge~~ 70 (157)
T 3pr9_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQ-----------VLPGLDEAILEMDVGEER 70 (157)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSS-----------SCHHHHHHHHHCCTTCEE
T ss_pred CCCCCEEEEEEEEEECCEEEEeccccccccccccccccCCCCEEEEECCCc-----------HHHHHHHHHcCCCCCCEE
Confidence 67899999999888899877765 457777532 234667778888888653
No 77
>2k5n_A Putative cold-shock protein; GFT protein structure, PSI, nesgc, OB fold, cold shock structural genomics; NMR {Pectobacterium atrosepticum}
Probab=25.38 E-value=51 Score=23.92 Aligned_cols=46 Identities=15% Similarity=0.293 Sum_probs=31.5
Q ss_pred cCcccceeecCCCcccCCCCCCCCCccccCCCEEEEEeeeEECceEE
Q 016129 74 RGVAFPSCVSVNNTLCHFSPLASDETVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~vs~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-..-...+...|++....+. .|++||.|.+++.---.|..|
T Consensus 14 KGfGFI~~~dg~~dFvH~s~i~~~g-~l~~G~~V~F~~~~g~kG~~A 59 (74)
T 2k5n_A 14 KGFGFIKDENGDNRYFHVIKVANPD-LIKKDAAVTFEPTTNNKGLSA 59 (74)
T ss_dssp TTEEEEEESSSCEEEEEGGGBSSGG-GCCTTCEEEEEEEECSSSEEE
T ss_pred CCeEEEecCCCCceEEEHhHcccCC-CCCCCCEEEEEEEeCCCCcee
Confidence 5666644433333478988764444 899999999999866678533
No 78
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomi 2, protein structure initiative; NMR {Shewanella oneidensis}
Probab=24.98 E-value=35 Score=24.86 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=31.7
Q ss_pred cCcccceeecCCCcccCCCCCC-CCC-ccccCCCEEEEEeeeEECce
Q 016129 74 RGVAFPSCVSVNNTLCHFSPLA-SDE-TVLQEGDMIKIDLGCHIDGF 118 (394)
Q Consensus 74 ~g~afp~~vs~n~~~~H~~P~~-~~~-~~L~~GDvV~iDlG~~~dGY 118 (394)
+|+.|-+.-...+...|++... .+. +.|++|+.|.+++.---.|.
T Consensus 12 KGfGFI~~~dG~DvFvH~s~i~~~~g~~~l~~G~~V~F~~~~g~kG~ 58 (74)
T 2kcm_A 12 KKYGFIQGDDGESYFLHFSELLDKKDEGKLVKGSMVHFDPTPTPKGL 58 (74)
T ss_dssp TTEEEEEETTSCEECCCGGGSSCSGGGTTCCTTSEEEEEEECTTTSC
T ss_pred CCEEEEecCCCceEEEEhhhcccCCCCCCCCCCCEEEEEEEECCCCc
Confidence 5666643333367888998774 333 68999999999997655675
No 79
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=24.97 E-value=75 Score=24.78 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=32.9
Q ss_pred CccccCCCEEEEEeeeEECceEEeE----EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCC
Q 016129 98 ETVLQEGDMIKIDLGCHIDGFIAVV----AHTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGK 159 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~dGY~ad~----aRT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~ 159 (394)
++.++.||.|.|+.-+..+|-.-|. ..+|.+|.+.+- ..++.++.-+++|-
T Consensus 27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~~~p~~f~lG~g~vi-----------~G~ee~L~Gmk~Ge 81 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIVDNKKLASASAQNYELTIGSNSFI-----------KGFETGLIAMKVNQ 81 (113)
T ss_dssp --CCCSSEEEEEEEEEEETTEECSTTCCSEEEEEETSSCSC-----------TTHHHHHHTSCSSE
T ss_pred CCCCCCCCEEEEEEEEEECCEEcccCCccCEEEEECCCChh-----------HHHHHHHCCCCCCC
Confidence 4678999999999887778866554 357777743222 24455566666663
No 80
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=24.60 E-value=49 Score=26.25 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=36.7
Q ss_pred CccccCCCEEEEEeeeEE--CceEEeEE------EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCh
Q 016129 98 ETVLQEGDMIKIDLGCHI--DGFIAVVA------HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKKN 161 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~--dGY~ad~a------RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~~ 161 (394)
.+..+.||.|.|+.-+.. +|-.-|.+ .+|.+|.+. +...++.++..+++|-+.
T Consensus 31 g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~-----------~i~g~e~~l~gm~~Ge~~ 91 (129)
T 2vn1_A 31 ENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGE-----------VIKGWDICVSSMRKNEKC 91 (129)
T ss_dssp GGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSS-----------SCHHHHHHHTTCCTTCEE
T ss_pred CCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCC-----------cCHHHHHHHhCCCCCCEE
Confidence 356789999999988887 88666654 467777532 234566677777777543
No 81
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=24.58 E-value=71 Score=25.06 Aligned_cols=52 Identities=17% Similarity=0.116 Sum_probs=37.4
Q ss_pred CccccCCCEEEEEeeeEE--CceEEeEE--------EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 016129 98 ETVLQEGDMIKIDLGCHI--DGFIAVVA--------HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKK 160 (394)
Q Consensus 98 ~~~L~~GDvV~iDlG~~~--dGY~ad~a--------RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~ 160 (394)
.+.++.||.|.|+.-+.. +|-.-|.+ .+|.+|.+. +...++.++..+++|-+
T Consensus 26 g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~-----------~i~G~e~~l~gm~~Ge~ 87 (125)
T 4dip_A 26 HRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILE-----------ALKGWDQGLKGMCVGEK 87 (125)
T ss_dssp SCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCS-----------SCHHHHHHSTTCCTTCE
T ss_pred CCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCC-----------hhHHHHHHHhCCCCCCE
Confidence 467889999999998886 78776765 467777532 23466677777777754
No 82
>1wfq_A UNR protein; beta-barrel, translational regulation, RNA chaperone, RNA/DN binding, QB fold, greek-KEY topology, structur genomics; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=23.08 E-value=48 Score=25.00 Aligned_cols=47 Identities=21% Similarity=0.326 Sum_probs=32.1
Q ss_pred cCcccceee-cCCCcccCCCCCCCCCccccCCCEEEEEeeeEEC-c-eEE
Q 016129 74 RGVAFPSCV-SVNNTLCHFSPLASDETVLQEGDMIKIDLGCHID-G-FIA 120 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~~d-G-Y~a 120 (394)
+|+.|-.+- +..++..|++....+-+.|++||.|.+++.-.-. | +.+
T Consensus 28 KGfGFI~~ddgg~DVFvH~s~i~~~~~~L~~G~~V~F~v~~~~k~Gk~~A 77 (89)
T 1wfq_A 28 TSYGFIQCSERQARLFFHCSQYNGNLQDLKVGDDVEFEVSSDRRTGKPIA 77 (89)
T ss_dssp SSEEEEEETTTTEEEEEETTTCSSCTTTCCTTCCEEEEEEECSSSCCEEE
T ss_pred CCeeEEecCCCCccEEEEhHHhhCccCCCCCCCEEEEEEEECCCCCCcEE
Confidence 466664443 3467788998774334689999999999976555 5 543
No 83
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=22.14 E-value=43 Score=27.26 Aligned_cols=37 Identities=16% Similarity=0.064 Sum_probs=21.7
Q ss_pred EEEEEEEEcCCCceeecCCCCccccCCCCCCcHHHHHHHH
Q 016129 314 HIKFTVLLMPNGSDRITSHTLQEIQSTKTIDDPEIKAWLA 353 (394)
Q Consensus 314 q~e~Tvlvt~~G~~~lT~~~~~~~~s~~~~~d~e~~~ll~ 353 (394)
..-.|++|.++|..+....... ..-..+-+||+++|+
T Consensus 118 ~~p~tflID~~G~I~~~~~~~~---~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 118 AKRAVFVIDKEGKVRYKWVSDD---PTKEPPYDEIEKVVK 154 (157)
T ss_dssp ECEEEEEECTTSBEEEEEEESS---TTCCCCHHHHHHHHH
T ss_pred eeeeEEEECCCCEEEEEEECCC---CCCCCCHHHHHHHHH
Confidence 3457999999998876542110 001112367887775
No 84
>1c9o_A CSPB, cold-shock protein; beta barrel, homodimer, transcription; 1.17A {Bacillus caldolyticus} SCOP: b.40.4.5 PDB: 2hax_A 1hz9_A 1hzb_A 1i5f_A 1hza_A 1hzc_A 3pf4_A 1csq_A 1nmf_A 1nmg_A 1csp_A 2f52_A 2es2_A 3pf5_A 2i5m_X 2i5l_X
Probab=21.40 E-value=41 Score=23.68 Aligned_cols=47 Identities=19% Similarity=0.363 Sum_probs=31.9
Q ss_pred cCcccceeecCCCcccCCCCCCCCC-ccccCCCEEEEEeeeEECceEE
Q 016129 74 RGVAFPSCVSVNNTLCHFSPLASDE-TVLQEGDMIKIDLGCHIDGFIA 120 (394)
Q Consensus 74 ~g~afp~~vs~n~~~~H~~P~~~~~-~~L~~GDvV~iDlG~~~dGY~a 120 (394)
+|+.|-+.-...+...|++....+. +.|.+||.|.+++.---.|..|
T Consensus 13 kGfGFI~~~~g~dvFvH~s~i~~~g~~~l~~G~~V~f~~~~~~kG~~A 60 (66)
T 1c9o_A 13 KGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQA 60 (66)
T ss_dssp TTEEEEEETTEEEEEEEGGGBCSSSCCCCCTTCEEEEEEEEETTEEEE
T ss_pred CCeEEEecCCCccEEEEHHHccccCCCCCCCCCEEEEEEEECCCCcEe
Confidence 5655643322267778988764333 4699999999999876677543
No 85
>1x65_A UNR protein; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold, greek-KEY topology protein; NMR {Homo sapiens}
Probab=21.13 E-value=43 Score=25.29 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=29.8
Q ss_pred cCcccceee-cCCCcccCCCCCCCCCccccCCCEEEEEeeeE
Q 016129 74 RGVAFPSCV-SVNNTLCHFSPLASDETVLQEGDMIKIDLGCH 114 (394)
Q Consensus 74 ~g~afp~~v-s~n~~~~H~~P~~~~~~~L~~GDvV~iDlG~~ 114 (394)
+|+.|-.+- +..+...|++.... .+.|++||.|.+++.--
T Consensus 18 KGfGFI~~~~gg~DvFvH~s~i~~-~~~L~~G~~V~F~v~~g 58 (89)
T 1x65_A 18 DGFGFIKCVDRDVRMFFHFSEILD-GNQLHIADEVEFTVVPD 58 (89)
T ss_dssp TTBCEEEESSSSSCCCCBTTGGGG-SCCCCTTCCEEECCBCC
T ss_pred CCcceeecCCCCccEEEEhhhccC-CCCCCCCCEEEEEEEeC
Confidence 577776554 35788899987643 37899999999998643
No 86
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=20.53 E-value=2.2e+02 Score=23.60 Aligned_cols=49 Identities=12% Similarity=0.113 Sum_probs=35.8
Q ss_pred ccCCCEEEEEeeeEECceEEeEE-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 016129 101 LQEGDMIKIDLGCHIDGFIAVVA-HTHVLQDGPVTGRAADVIAAANTAAEVALRLVRPGKK 160 (394)
Q Consensus 101 L~~GDvV~iDlG~~~dGY~ad~a-RT~~vG~~~~s~~~~~l~~a~~~a~~a~i~~lkPG~~ 160 (394)
++.||.|.++.-...+|-.-|.+ .+|.+|.+. +...++.++.-+++|-+
T Consensus 3 i~~gd~V~v~Y~g~~dG~~fdss~~~f~~G~g~-----------vipG~e~aL~Gm~~Ge~ 52 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQVEGEVLDQGELSYLHGHRN-----------LIPGLEEALEGREEGEA 52 (158)
T ss_dssp CCTTEEEEEEEEEEETTEEEEEEEEEEETTSSS-----------SCHHHHHHHTTCBTTCE
T ss_pred CCCCCEEEEEEEEEECCEEEEeeEEEEEECCCC-----------cChHHHHHHcCCCCCCE
Confidence 67899999998777899877777 677777532 23455667777777754
Done!