BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016133
(394 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|38230500|gb|AAR14271.1| predicted protein [Populus tremula x Populus alba]
Length = 772
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/394 (77%), Positives = 343/394 (87%), Gaps = 7/394 (1%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
V+ KI+EDLDSGKPS+RLLYVTPEL ATPGFMSKL KIH+RGLLNL+AIDEAHCISSWGH
Sbjct: 112 VRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAIDEAHCISSWGH 171
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRPSYRKLSSLRN+LPDVP+LALTATAAPKVQ DV+ESLCLQ+PLVLKSSFNRPN++YE
Sbjct: 172 DFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLKSSFNRPNIYYE 231
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
VRYKDLLDDAYADL SVLK+ GD CAIVYCLER TCD LSA+LS GIS AAYHAGLN+K
Sbjct: 232 VRYKDLLDDAYADLPSVLKSCGDVCAIVYCLERATCDGLSAHLSKNGISSAAYHAGLNNK 291
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RSSVLDDWISS+ QVVVATVAFGMGIDRKDVR+VCHFNIPKSME+FYQESGRAGRDQLP
Sbjct: 292 LRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNIPKSMESFYQESGRAGRDQLP 351
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
SKSLLYYG+DDR++MEFIL ++K QS S+ SKKS++DF+ M++YCEG+GCRRKK
Sbjct: 352 SKSLLYYGVDDRKKMEFILRNAENKKLQSSSSGGELSKKSLTDFNLMIEYCEGAGCRRKK 411
Query: 303 ILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVL-QKNHFSQIFIS-SQDMTD-- 358
ILESFGEQ+ +LCK SCDACKHPNL+AKYL ELT+++ Q+N FS++F+S S DM D
Sbjct: 412 ILESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTSIARQRNGFSRVFMSRSTDMIDEE 471
Query: 359 ---GGQYSEFWNRDDEASGSEEDISDCDGNINLV 389
Q SEFWNRDDEA SEEDISD D V
Sbjct: 472 FRIDEQISEFWNRDDEAKSSEEDISDFDDETEAV 505
>gi|225444694|ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
vinifera]
Length = 730
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 301/390 (77%), Positives = 339/390 (86%), Gaps = 3/390 (0%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+V+ KI+EDL SGKPSLRLLYVTPEL ATPGFMS+L KIH+RGLLNL+AIDEAHCISSWG
Sbjct: 113 KVRDKIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWG 172
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYRKLSSLRN+LPDVPILALTATA PKVQKDV+ESLCLQNPLVLKSSFNRPN++Y
Sbjct: 173 HDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVIESLCLQNPLVLKSSFNRPNIYY 232
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDD YADL +LK+ G+ C IVYCLERTTCDELSA+LS GIS AAYHAGLN+
Sbjct: 233 EVRYKDLLDDVYADLSKLLKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNN 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RSSVLDDWISS+ QVVVATVAFGMGIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQL
Sbjct: 293 KLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+SLLYYG+DDR+RMEFILS +SK QS S+++ SKKS++DFS MV+YCEGS CRRK
Sbjct: 353 PSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLADFSHMVEYCEGSSCRRK 412
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSA-VLQKNHF--SQIFISSQDMTD 358
KILE+FGEQ+ S+C+ SCDACKHPNL+AKYL E SA L++N+ SS D+ D
Sbjct: 413 KILENFGEQVAASICRKSCDACKHPNLVAKYLEEFASACALRQNNVFSRIFISSSSDLVD 472
Query: 359 GGQYSEFWNRDDEASGSEEDISDCDGNINL 388
Q +EFWNRDDE SGSEEDISD D I +
Sbjct: 473 KEQLTEFWNRDDEVSGSEEDISDSDDGIEV 502
>gi|255579791|ref|XP_002530733.1| DNA helicase, putative [Ricinus communis]
gi|223529697|gb|EEF31639.1| DNA helicase, putative [Ricinus communis]
Length = 718
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 300/389 (77%), Positives = 339/389 (87%), Gaps = 7/389 (1%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+KTKI+EDLDSGKPS+RLLYVTPEL ATPGFMSKL +IH+RGLLNL+AIDEAHCIS+WG
Sbjct: 117 QLKTKIHEDLDSGKPSIRLLYVTPELIATPGFMSKLTRIHARGLLNLIAIDEAHCISTWG 176
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFR SYRKLSSLRN PDVPILALTATA PKVQKDV+ESLCLQ+PL+LKSSFNR N++Y
Sbjct: 177 HDFRASYRKLSSLRNLFPDVPILALTATAVPKVQKDVIESLCLQDPLILKSSFNRSNIYY 236
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDDAYADL SVLK++GD CAI+YCL+RTTCD L+A+LS GISCAAYHAGLN+
Sbjct: 237 EVRYKDLLDDAYADLSSVLKSSGDICAIIYCLQRTTCDGLAAHLSKNGISCAAYHAGLNN 296
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RSSVLDDWISS+ QVVVATVAFG KDV+LVCHFNIPKSMEAFYQESGRAGRDQL
Sbjct: 297 KLRSSVLDDWISSKIQVVVATVAFG-----KDVKLVCHFNIPKSMEAFYQESGRAGRDQL 351
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
P +SLLYYG+DD++RMEFILS SK QS S+++ SKKS+SDF QMV+YCEGSGCRRK
Sbjct: 352 PCRSLLYYGVDDQKRMEFILSSAGSKKLQSSSSQDGLSKKSLSDFKQMVEYCEGSGCRRK 411
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSA-VLQKNHFSQIFISSQDMTDGG 360
KILESFGEQ+PVSLCK +CDAC+HPNL+AKYL EL +A ++ SQIFISS D G
Sbjct: 412 KILESFGEQVPVSLCKKTCDACRHPNLVAKYLEELKTACTARRAGLSQIFISS-STEDRG 470
Query: 361 QYSEFWNRDDEASGSEEDISDCDGNINLV 389
Q+SEFWNRDDE S SEEDISD D +V
Sbjct: 471 QFSEFWNRDDEVSNSEEDISDSDDGTEVV 499
>gi|297738545|emb|CBI27790.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 293/407 (71%), Positives = 334/407 (82%), Gaps = 20/407 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+V+ KI+EDL SGKPSLRLLYVTPEL ATPGFMS+L KIH+RGLLNL+AIDEAHCISSWG
Sbjct: 113 KVRDKIHEDLQSGKPSLRLLYVTPELIATPGFMSRLTKIHARGLLNLIAIDEAHCISSWG 172
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYRKLSSLRN+LPDVPILALTATA PKVQKDV+ESLCLQNPLVLKSSFNRPN++Y
Sbjct: 173 HDFRPSYRKLSSLRNHLPDVPILALTATAVPKVQKDVIESLCLQNPLVLKSSFNRPNIYY 232
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDD YADL +LK+ G+ C IVYCLERTTCDELSA+LS GIS AAYHAGLN+
Sbjct: 233 EVRYKDLLDDVYADLSKLLKSCGNVCGIVYCLERTTCDELSAHLSKNGISSAAYHAGLNN 292
Query: 182 KARSSVLDDWISSRKQVVVATVA-----------------FGMGIDRKDVRLVCHFNIPK 224
K RSSVLDDWISS+ QVV+ + +GIDRKDVR+VCHFNIPK
Sbjct: 293 KLRSSVLDDWISSKIQVVINSWGFFFIFNFFLFFALFNIILSIGIDRKDVRIVCHFNIPK 352
Query: 225 SMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSIS 284
SMEAFYQESGRAGRDQLPS+SLLYYG+DDR+RMEFILS +SK QS S+++ SKKS++
Sbjct: 353 SMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSNAESKKLQSSSSQDGMSKKSLA 412
Query: 285 DFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSA-VLQK 343
DFS MV+YCEGS CRRKKILE+FGEQ+ S+C+ SCDACKHPNL+AKYL E SA L++
Sbjct: 413 DFSHMVEYCEGSSCRRKKILENFGEQVAASICRKSCDACKHPNLVAKYLEEFASACALRQ 472
Query: 344 NHF--SQIFISSQDMTDGGQYSEFWNRDDEASGSEEDISDCDGNINL 388
N+ SS D+ D Q +EFWNRDDE SGSEEDISD D I +
Sbjct: 473 NNVFSRIFISSSSDLVDKEQLTEFWNRDDEVSGSEEDISDSDDGIEV 519
>gi|356532786|ref|XP_003534951.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Glycine max]
Length = 732
Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust.
Identities = 289/387 (74%), Positives = 335/387 (86%), Gaps = 9/387 (2%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K KI+EDLDSGKPS RLLYVTPEL TPGFM+KL KI++RGLLNL+AIDEAHCISSWGH
Sbjct: 116 AKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYTRGLLNLIAIDEAHCISSWGH 175
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRPSYRKLSSLR++LPDVPILALTATA PKVQKDV+ESL +QNPL+LKSSFNRPN++YE
Sbjct: 176 DFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESLQMQNPLMLKSSFNRPNIYYE 235
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
VRYKDLLDDAYADL + LK+ GD CAIVYCLER+ CD+LS LS GISCAAYHAGLN+K
Sbjct: 236 VRYKDLLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLSTNLSQNGISCAAYHAGLNNK 295
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R+SVLDDWISS+ +VVVATVAFG KDVR+VCHFNIPKSMEAFYQESGRAGRDQLP
Sbjct: 296 MRTSVLDDWISSKIKVVVATVAFG-----KDVRIVCHFNIPKSMEAFYQESGRAGRDQLP 350
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
S+SLLYYG+DDR+RMEFIL K+ SK SQS S++E SSK S+ F+ MV+YCEGSGCRRK+
Sbjct: 351 SRSLLYYGVDDRKRMEFILRKSVSKKSQSSSSQEESSKMSLIAFNLMVEYCEGSGCRRKR 410
Query: 303 ILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTS--AVLQKNHFSQIFI-SSQDMTDG 359
+LESFGEQ+ SLC +CD C+HPNL+A+YL +LT+ A+ QKN S++F+ SS D +G
Sbjct: 411 VLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTACALRQKNGSSRVFMTSSTDAING 470
Query: 360 GQYSEFWNRDDEASGSEEDISDC-DGN 385
Q SEFWN+D+EASGSEEDISD DGN
Sbjct: 471 EQLSEFWNQDEEASGSEEDISDSDDGN 497
>gi|449446630|ref|XP_004141074.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
gi|449488107|ref|XP_004157941.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Cucumis
sativus]
Length = 729
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 282/392 (71%), Positives = 332/392 (84%), Gaps = 4/392 (1%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K KI+EDL+S KP+LRLLYVTPEL AT GFM+KL KI+SRGLLNL+AIDEAHCIS+WG
Sbjct: 113 QAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLIAIDEAHCISTWG 172
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYRKLSSLR+ LP++PILALTATA PKVQKDV+ SL L+NPLVLKSSFNRPN++Y
Sbjct: 173 HDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISLGLENPLVLKSSFNRPNIYY 232
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDD ADLC+ LK++GD CAI+YCLER CD+LS YL+ GISCAAYHAGL +
Sbjct: 233 EVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLSVYLAKYGISCAAYHAGLKN 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R SVL+DWISSR QVVVATVAFGMGIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQL
Sbjct: 293 ELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQ---SFSTRERSSKKSISDFSQMVDYCEGSGC 298
PSKSLLYYG++DRRRMEFIL S + + S S++E+ +KS++DF+QMV+YCEGS C
Sbjct: 353 PSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRC 412
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL-TSAVLQKNHFSQIFISSQDMT 357
RRK+ILESFGEQ+P S+C SCDACKHPN++A YL EL TSAV + N S+IF+S +
Sbjct: 413 RRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTD 472
Query: 358 DGGQYSEFWNRDDEASGSEEDISDCDGNINLV 389
D ++SEFWN DEAS S EDIS+ D + +V
Sbjct: 473 DEDEFSEFWNLKDEASESGEDISNSDDDTEVV 504
>gi|30690466|ref|NP_849500.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|332661157|gb|AEE86557.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 620
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/383 (71%), Positives = 331/383 (86%), Gaps = 8/383 (2%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
VK KI+EDLDSGKPS+RLLYVTPEL AT GFM KL+K+HSRGLLNL+AIDEAHCISSWG
Sbjct: 20 HVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWG 79
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYR+LS+LR+ L DVP+LALTATAAPKVQKDV++SL L+NPLVLKSSFNRPN+FY
Sbjct: 80 HDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFY 139
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLD+AY DL ++LK+ G+ CAI+YCLERTTCD+LS +LS+ GIS AAYHAGLN
Sbjct: 140 EVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNS 199
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RS+VLDDW+SS+KQ++VATVAFGMGID+KDVR+VCHFNIPKSME+FYQESGRAGRDQL
Sbjct: 200 KMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQL 259
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+S+LYYG+DDR++ME++L +NS++ + SSKK SDF Q+V YCEGSGCRRK
Sbjct: 260 PSRSVLYYGVDDRKKMEYLL-----RNSENKKS--SSSKKPTSDFEQIVTYCEGSGCRRK 312
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI-SSQDMTDGG 360
KILESFGE+ PV CK +CDACKHPN +A L EL + ++++ S+IFI SS + T+ G
Sbjct: 313 KILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEG 372
Query: 361 QYSEFWNRDDEASGSEEDISDCD 383
QYSEFWNR+++ S S E+ISD D
Sbjct: 373 QYSEFWNRNEDGSNSNEEISDSD 395
>gi|30690461|ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 3; AltName:
Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis thaliana]
gi|332661156|gb|AEE86556.1| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
Length = 713
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/383 (71%), Positives = 331/383 (86%), Gaps = 8/383 (2%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
VK KI+EDLDSGKPS+RLLYVTPEL AT GFM KL+K+HSRGLLNL+AIDEAHCISSWG
Sbjct: 113 HVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWG 172
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYR+LS+LR+ L DVP+LALTATAAPKVQKDV++SL L+NPLVLKSSFNRPN+FY
Sbjct: 173 HDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLRNPLVLKSSFNRPNIFY 232
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLD+AY DL ++LK+ G+ CAI+YCLERTTCD+LS +LS+ GIS AAYHAGLN
Sbjct: 233 EVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNS 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RS+VLDDW+SS+KQ++VATVAFGMGID+KDVR+VCHFNIPKSME+FYQESGRAGRDQL
Sbjct: 293 KMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+S+LYYG+DDR++ME++L +NS++ + SSKK SDF Q+V YCEGSGCRRK
Sbjct: 353 PSRSVLYYGVDDRKKMEYLL-----RNSENKKS--SSSKKPTSDFEQIVTYCEGSGCRRK 405
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI-SSQDMTDGG 360
KILESFGE+ PV CK +CDACKHPN +A L EL + ++++ S+IFI SS + T+ G
Sbjct: 406 KILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEG 465
Query: 361 QYSEFWNRDDEASGSEEDISDCD 383
QYSEFWNR+++ S S E+ISD D
Sbjct: 466 QYSEFWNRNEDGSNSNEEISDSD 488
>gi|297802358|ref|XP_002869063.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
gi|297314899|gb|EFH45322.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
lyrata]
Length = 744
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/387 (70%), Positives = 331/387 (85%), Gaps = 12/387 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
VK KI+EDLDSGKPS+RLLYVTPEL AT GFM KL+K+HSRGLLNL+AIDEAHCISSWG
Sbjct: 140 HVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDEAHCISSWG 199
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYR+LS+LR+ L DVP+LALTATAAPKVQKDV++SL LQNPLVLKSSFNRPN+FY
Sbjct: 200 HDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSLNLQNPLVLKSSFNRPNIFY 259
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLD+AY DL ++LK+ G+ CAI+YCLERTTCD+LS +LS+ GIS +AYHAGLN
Sbjct: 260 EVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSSAYHAGLNS 319
Query: 182 KARSSVLDDWISSRKQVVVATVAFG----MGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
K RS+VLDDW+SS+KQ++VATVAFG +GID+KDVR+VCHFNIPKSME+FYQESGRAG
Sbjct: 320 KLRSTVLDDWLSSKKQIIVATVAFGSMGHVGIDKKDVRMVCHFNIPKSMESFYQESGRAG 379
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG 297
RDQLPS+S+LYYG+DDR++ME++L +++K S SSKK SDF Q+V YCEGSG
Sbjct: 380 RDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSP-------SSKKPTSDFEQIVTYCEGSG 432
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI-SSQDM 356
CRRKKILESFGE+ PV CK +CDACK+PN +A L EL + ++++ S+IFI SS +
Sbjct: 433 CRRKKILESFGEEFPVQHCKKTCDACKYPNQVAHCLEELMTTASRRHNSSRIFITSSNNK 492
Query: 357 TDGGQYSEFWNRDDEASGSEEDISDCD 383
T+ GQYSEFWNR+++ S S+E+ISD D
Sbjct: 493 TNEGQYSEFWNRNEDGSNSDEEISDSD 519
>gi|357450081|ref|XP_003595317.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355484365|gb|AES65568.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 776
Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/439 (65%), Positives = 341/439 (77%), Gaps = 50/439 (11%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+ K KI+EDL SGKPS RLLYVTPEL ATPGFMSKL KIHSRGLL+L+AIDEAHCISSWG
Sbjct: 119 KAKDKIHEDLGSGKPSTRLLYVTPELIATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWG 178
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP+YRKLS+LR++LPDVPILALTATA PKVQKDV+ESL +QN L+LK+SFNRPN++Y
Sbjct: 179 HDFRPTYRKLSTLRSHLPDVPILALTATAVPKVQKDVVESLHMQNALILKTSFNRPNIYY 238
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDD+Y+DL LK+ GD CAI+YCLER+ CD+LSA+LS GISCAAYHAGLN+
Sbjct: 239 EVRYKDLLDDSYSDLSDRLKSMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNN 298
Query: 182 KARSSVLDDWISSRKQVVVATVAFG----------------------------------- 206
K R+SVL DWISS+ +VVVATVAFG
Sbjct: 299 KMRTSVLHDWISSKTKVVVATVAFGRKCGIPHQMVQIACTTGTPLRNRNATGIAWTTTPA 358
Query: 207 -------------MGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
MGIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQLPS SLLYYG+DD
Sbjct: 359 ESIGLPNLWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDD 418
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPV 313
RRRMEFIL + +K SQS S++E S++ S++ F+QMV+YCEGSGCRRK ILESFGEQ+
Sbjct: 419 RRRMEFILRNSGNKKSQSSSSQEESTRMSLTAFNQMVEYCEGSGCRRKIILESFGEQVTT 478
Query: 314 SLCKNSCDACKHPNLLAKYLGELTSAV-LQKNHFSQIFI-SSQDMTDGGQYSEFWNRDDE 371
SLC +CD+C+HPNL+A+ L +LT+A L++ S++FI SS D DGGQ SEFWNRD+E
Sbjct: 479 SLCGKTCDSCRHPNLVARNLEDLTAACSLRQRGGSRVFITSSTDAIDGGQLSEFWNRDEE 538
Query: 372 ASGSEEDISDCDGNINLVI 390
ASGSEEDISD DG+ N +
Sbjct: 539 ASGSEEDISDIDGDGNEAV 557
>gi|357137820|ref|XP_003570497.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Brachypodium
distachyon]
Length = 777
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/381 (67%), Positives = 313/381 (82%), Gaps = 2/381 (0%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K +IYEDLDSG PSL+LLYVTPEL AT GF +KL K++SRGLL LVAIDEAHCIS+WGHD
Sbjct: 115 KNEIYEDLDSGNPSLKLLYVTPELVATFGFKAKLTKLYSRGLLGLVAIDEAHCISTWGHD 174
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYRK+SSLR PD+PILALTATA PKVQKDV+ SLCLQNP++L++SFNRPN+FYEV
Sbjct: 175 FRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVISSLCLQNPVILRASFNRPNIFYEV 234
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
RYKDLLDD Y+D+ ++LK++G+ C+I+YCLER CD+L+ +LS GIS A YHAGLN K
Sbjct: 235 RYKDLLDDVYSDISNLLKSSGNVCSIIYCLERAACDDLNMHLSQQGISSAVYHAGLNSKV 294
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RS+VLDDW+SSR QVVVATVAFGMGIDR+DVR+VCHFN+PKSME+FYQESGRAGRDQ PS
Sbjct: 295 RSAVLDDWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQQPS 354
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+S+LYYG+DDRRRMEFIL SK SQ S+ S+K+++DFSQ+VDYCE S CRRKKI
Sbjct: 355 RSVLYYGLDDRRRMEFILRNTNSKKSQPSSSSSELSEKALADFSQIVDYCESSSCRRKKI 414
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAV-LQKNHFSQIFISSQDMTDGGQY 362
+ESFGE++ +LC+ SCDACKHPN ++ L EL + N S +F SS +
Sbjct: 415 IESFGEKVQPTLCQRSCDACKHPNQVSSRLEELRRVPNCRYNKISPVFKSSS-VNPENLD 473
Query: 363 SEFWNRDDEASGSEEDISDCD 383
+EFWNR+D+AS S EDISD D
Sbjct: 474 TEFWNREDDASISAEDISDSD 494
>gi|326514896|dbj|BAJ99809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/370 (66%), Positives = 305/370 (82%), Gaps = 4/370 (1%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K KI+EDLDSG+PSL+LLYVTPEL AT GF +KL K+H+RGLL LVAIDEAHCIS+WGHD
Sbjct: 115 KNKIHEDLDSGRPSLKLLYVTPELVATSGFKAKLTKLHNRGLLGLVAIDEAHCISTWGHD 174
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYRK+SSLR PD+PILALTATA PKVQKDV+ SL LQNP++LK+SFNRPN+FYEV
Sbjct: 175 FRPSYRKISSLRKQFPDIPILALTATAVPKVQKDVISSLSLQNPVILKASFNRPNIFYEV 234
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
RYKDLLDD ++D+ ++LK++G+ C+I+YCLER CD+L+ +LS GIS AAYHAGLN K
Sbjct: 235 RYKDLLDDVFSDISNLLKSSGNVCSIIYCLERAACDDLTMHLSQQGISSAAYHAGLNSKV 294
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R++VLDDW+SSR QVVVATVAFGMGIDR DVR+VCHFN+PKSME+FYQESGRAGRDQ PS
Sbjct: 295 RTTVLDDWLSSRTQVVVATVAFGMGIDRHDVRIVCHFNLPKSMESFYQESGRAGRDQQPS 354
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+S+LYYG++DRRRMEFIL + S+ Q S+ S+K+++DFSQ+VDYCE S CRRKKI
Sbjct: 355 RSVLYYGLEDRRRMEFILRNSSSRKQQPPSSSTELSEKTLADFSQIVDYCESSTCRRKKI 414
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQK-NHFSQIFISSQDMTDGGQY 362
+ESFGE++ +LC+ +CDACKHPN +A L +L + N S +F +S D +
Sbjct: 415 IESFGEKVQPTLCQRTCDACKHPNQVASRLEDLRRVPNSRFNKISPVFKTSS--VDPKHF 472
Query: 363 -SEFWNRDDE 371
+EFWNR+D+
Sbjct: 473 DTEFWNREDD 482
>gi|242066738|ref|XP_002454658.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
gi|241934489|gb|EES07634.1| hypothetical protein SORBIDRAFT_04g035010 [Sorghum bicolor]
Length = 714
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/389 (62%), Positives = 298/389 (76%), Gaps = 25/389 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
K +I+EDLD+G PSL+LLYVTPEL AT GFM+KLKK+++RGLL LVAIDEAHCIS+WG
Sbjct: 94 HTKQRIHEDLDTGNPSLKLLYVTPELVATSGFMAKLKKLYNRGLLGLVAIDEAHCISTWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRPSYRKLSSLR PD+P+LALTATA PKVQKDV+ SLCLQNP++L++SFNRPN+FY
Sbjct: 154 HDFRPSYRKLSSLRKQFPDIPLLALTATAVPKVQKDVISSLCLQNPVILRASFNRPNIFY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLDD Y+D+ ++LK++G+ C+I+YCLER CD+LS +LS G+S AAYHAGLN
Sbjct: 214 EVRYKDLLDDVYSDISNLLKSSGNACSIIYCLERAACDDLSMHLSQQGVSSAAYHAGLNS 273
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RSSVLDDW+SSR QVVVATVAFGMGIDR+DVR+VCHFN+PKSME+FYQESGRAGRDQ
Sbjct: 274 KVRSSVLDDWLSSRTQVVVATVAFGMGIDRQDVRIVCHFNLPKSMESFYQESGRAGRDQR 333
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+S+LYYG+DDRRRMEFIL + +Q S+ S+K+++DFS
Sbjct: 334 PSRSVLYYGLDDRRRMEFILRNPKINKAQPSSSSNELSEKALADFS-------------- 379
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAV-LQKNHFSQIFISSQDMTDGG 360
Q+ +LC+ SCDACKHPNL++ L EL + N S +F SS +
Sbjct: 380 --------QVQPTLCQRSCDACKHPNLVSSRLEELRRVPNCRFNKISPVFQSS--VKPAH 429
Query: 361 QYSEFWNRDDEASGSEEDISDCDGNINLV 389
+EFWNR+DEAS S EDISD D +V
Sbjct: 430 LDTEFWNREDEASISAEDISDSDDGNEVV 458
>gi|47497399|dbj|BAD19436.1| DNA helicase RECQE-like [Oryza sativa Japonica Group]
gi|125583898|gb|EAZ24829.1| hypothetical protein OsJ_08609 [Oryza sativa Japonica Group]
Length = 692
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/387 (61%), Positives = 294/387 (75%), Gaps = 27/387 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K KI+EDLDSG PSL+LLYVTPEL AT GF +KL K+++RGLL LVAIDEAHCIS+WGHD
Sbjct: 81 KQKIHEDLDSGNPSLKLLYVTPELVATSGFKAKLTKLYNRGLLGLVAIDEAHCISTWGHD 140
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYRKLSSLRN PD+PILALTATA PKVQKDV+ SLCL+NPL+L++SFNRPN+FYEV
Sbjct: 141 FRPSYRKLSSLRNQFPDIPILALTATAVPKVQKDVISSLCLRNPLILRASFNRPNIFYEV 200
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
RYKDLLDD Y+D+ ++LK++G+ C+IVYCLER CD+L+ +LS GIS AAYHAGLN K
Sbjct: 201 RYKDLLDDVYSDISNLLKSSGNVCSIVYCLERAVCDDLTMHLSQQGISSAAYHAGLNSK- 259
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
GIDR+DVR+VCH+N+PKSMEAFYQESGRAGRDQ PS
Sbjct: 260 ------------------------GIDRQDVRIVCHYNLPKSMEAFYQESGRAGRDQQPS 295
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
KS+LYYG+DDR++MEFIL ++K S+ S+ S+K+++DFSQ++DYCE S CRRK I
Sbjct: 296 KSVLYYGLDDRKKMEFILRNTKNKKSELSSSSTELSEKALADFSQIIDYCENSTCRRKMI 355
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSA-VLQKNHFSQIFISSQDMTDGGQY 362
+ESFGE++ +LC+ SCDACKHPNL++ L EL + N S +F SS
Sbjct: 356 IESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPTCRYNKISPVFKSSL-ANPKHME 414
Query: 363 SEFWNRDDEASGSEEDISDCDGNINLV 389
+EFWNR+D+AS S EDISD D +V
Sbjct: 415 TEFWNREDDASISVEDISDSDDGKEVV 441
>gi|125541362|gb|EAY87757.1| hypothetical protein OsI_09175 [Oryza sativa Indica Group]
Length = 692
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/387 (61%), Positives = 294/387 (75%), Gaps = 27/387 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K KI+EDLDSG PSL+LLYVTPEL AT GF +KL K+++RGLL LVAIDEAHCIS+WGHD
Sbjct: 81 KQKIHEDLDSGNPSLKLLYVTPELVATSGFKAKLTKLYNRGLLGLVAIDEAHCISTWGHD 140
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYRKLSSLRN PD+PILALTATA PKVQKDV+ SLCL+NPL+L++SFNRPN+FYEV
Sbjct: 141 FRPSYRKLSSLRNQFPDIPILALTATAVPKVQKDVISSLCLRNPLILRASFNRPNIFYEV 200
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
RYKDLLDD Y+D+ ++LK++G+ C+IVYCLER CD+L+ +LS GIS AAYHAGLN K
Sbjct: 201 RYKDLLDDVYSDISNLLKSSGNVCSIVYCLERAVCDDLTMHLSQQGISSAAYHAGLNSK- 259
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
GIDR+DVR+VCH+N+PKSMEAFYQESGRAGRDQ PS
Sbjct: 260 ------------------------GIDRQDVRIVCHYNLPKSMEAFYQESGRAGRDQQPS 295
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
KS+LYYG+DDR++MEFIL ++K S+ S+ S+K+++DFSQ++DYCE S CRRK I
Sbjct: 296 KSVLYYGLDDRKKMEFILRNTKNKKSELSSSSTELSEKALADFSQIIDYCENSTCRRKMI 355
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSA-VLQKNHFSQIFISSQDMTDGGQY 362
+ESFGE++ +LC+ SCDACKHPNL++ L EL + N S +F SS
Sbjct: 356 IESFGEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPTCRYNKISPVFKSSL-ANPKHME 414
Query: 363 SEFWNRDDEASGSEEDISDCDGNINLV 389
+EFWNR+D+AS S EDISD D +V
Sbjct: 415 TEFWNREDDASISVEDISDSDDGKEVV 441
>gi|3367592|emb|CAA20044.1| putative protein [Arabidopsis thaliana]
gi|7270526|emb|CAB81483.1| putative protein [Arabidopsis thaliana]
Length = 926
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/383 (62%), Positives = 295/383 (77%), Gaps = 42/383 (10%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
VK KI+EDLDSGKPS+RLLYVTPEL AT GFM KL+K+HSRGLLNL+AIDE
Sbjct: 360 HVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHSRGLLNLIAIDE-------- 411
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
+ + + +VQKDV++SL L+NPLVLKSSFNRPN+FY
Sbjct: 412 ----------------------IFFSTSILCRVQKDVIDSLNLRNPLVLKSSFNRPNIFY 449
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVRYKDLLD+AY DL ++LK+ G+ CAI+YCLERTTCD+LS +LS+ GIS AAYHAGLN
Sbjct: 450 EVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLSVHLSSIGISSAAYHAGLNS 509
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RS+VLDDW+SS+KQ++VATVAFGMGID+KDVR+VCHFNIPKSME+FYQESGRAGRDQL
Sbjct: 510 KMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQL 569
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+S+LYYG+DDR++ME++L +NS++ + SSKK SDF Q+V YCEGSGCRRK
Sbjct: 570 PSRSVLYYGVDDRKKMEYLL-----RNSENKKS--SSSKKPTSDFEQIVTYCEGSGCRRK 622
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI-SSQDMTDGG 360
KILESFGE+ CK +CDACKHPN +A L EL + ++++ S+IFI SS + T+ G
Sbjct: 623 KILESFGEE----QCKKTCDACKHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEG 678
Query: 361 QYSEFWNRDDEASGSEEDISDCD 383
QYSEFWNR+++ S S E+ISD D
Sbjct: 679 QYSEFWNRNEDGSNSNEEISDSD 701
>gi|302818699|ref|XP_002991022.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
gi|300141116|gb|EFJ07830.1| hypothetical protein SELMODRAFT_41328 [Selaginella moellendorffii]
Length = 600
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/388 (53%), Positives = 274/388 (70%), Gaps = 5/388 (1%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
++++ KI+E+L SGKP+L+LLYVTPE AT M KL+K+H R LL+L+AIDEAHCISSW
Sbjct: 89 VKMRNKIFEELQSGKPNLKLLYVTPESVATNHLMQKLRKLHERSLLSLIAIDEAHCISSW 148
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRPSYRKLS+LR LPD+PILALTATA+ KVQ+D+++SL LQ VL SSFNR N+F
Sbjct: 149 GHDFRPSYRKLSALRTSLPDIPILALTATASKKVQEDIIKSLSLQKAAVLISSFNRANIF 208
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YEVR+KDL+ AY DL +++ C I+YC R CDE+ + L + GISC YHAG+N
Sbjct: 209 YEVRFKDLMTSAYEDLRNIITKAPTRCMIIYCHARAMCDEIGSRLKSDGISCRVYHAGIN 268
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
KARS L DW+ ++VAT+AFG GIDRKDVR+VCHFN+PKS+E+FYQESGRAGRD
Sbjct: 269 VKARSQALQDWVLGEVHIIVATIAFGYGIDRKDVRMVCHFNMPKSLESFYQESGRAGRDG 328
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--KKSISDFSQMVDYCEGSGC 298
P+KS+LYY +DD+R ME+++ + + S + KK+I F ++V YCE + C
Sbjct: 329 KPAKSILYYSVDDKRTMEYVIRSSSQRQQGGISENGENELLKKNIEAFEKVVAYCEEASC 388
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTD 358
RR+++LE FGE + LC +CDACK P L++ L EL A + + +F +D +
Sbjct: 389 RRRRVLEHFGENVSPLLCSKTCDACKWPEKLSRDLKELADASCFNSVWHLLFTCCRDCSS 448
Query: 359 GGQYSEFWNRDDE---ASGSEEDISDCD 383
SEFWN D+E +E+DISD +
Sbjct: 449 PNDKSEFWNYDNEDVDEHDAEDDISDSE 476
>gi|302820099|ref|XP_002991718.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
gi|300140567|gb|EFJ07289.1| hypothetical protein SELMODRAFT_41332 [Selaginella moellendorffii]
Length = 594
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/386 (53%), Positives = 271/386 (70%), Gaps = 11/386 (2%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
++++ KI+E+L SGKP+L+LLYVTPE AT M KL+K+H R LL+L+AIDEAHCISSW
Sbjct: 89 VKMRNKIFEELQSGKPNLKLLYVTPESVATNHLMQKLRKLHERSLLSLIAIDEAHCISSW 148
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRPSYRKLS+LR LPD+PILALTATA+ KVQ+D+++SL LQ VL SSFNR N+F
Sbjct: 149 GHDFRPSYRKLSALRTSLPDIPILALTATASKKVQEDIIKSLSLQKAAVLISSFNRANIF 208
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YEVR+KDL+ AY DL +++ C I+YC R CDE+ + L + GISC YHAG+N
Sbjct: 209 YEVRFKDLMKSAYEDLRNIITTAPTRCMIIYCHARAMCDEIGSRLKSDGISCRVYHAGIN 268
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
KARS L DW+ ++VAT+AFG GIDRKDVR+VCHFN+PKS+E+FYQESGRAGRD
Sbjct: 269 VKARSQALQDWVLGEVHIIVATIAFGYGIDRKDVRMVCHFNMPKSLESFYQESGRAGRDG 328
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--KKSISDFSQMVDYCEGSGC 298
P+KS+LYY +DD+R ME+++ + + S + KK+I F ++V YCE + C
Sbjct: 329 KPAKSILYYSVDDKRTMEYVIRSSSQRQQAGISENGENELLKKNIEAFEKVVAYCEEASC 388
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTD 358
RR+++LE FGE + LC +CDACK P L++ L EL A +F +D +
Sbjct: 389 RRRRVLEHFGENVSPLLCSKTCDACKWPEKLSRDLKELADAS------CLLFTCCRDCSS 442
Query: 359 GGQYSEFWNRDDE---ASGSEEDISD 381
SEFWN D+E +E+DISD
Sbjct: 443 PNDKSEFWNYDNEDVDEHDAEDDISD 468
>gi|224133974|ref|XP_002327725.1| predicted protein [Populus trichocarpa]
gi|222836810|gb|EEE75203.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 367 bits (942), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 190/204 (93%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
V+ KI+EDLDSGKPS+RLLYVTPEL ATPGFMSKL KIH+RGLLNL+AIDEAHCISSWGH
Sbjct: 115 VRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHTRGLLNLIAIDEAHCISSWGH 174
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRPSYRKLSSLRN+LPDVP+LALTATAAPKVQ DV+ESLCLQ+PLVL SSFNRPN++YE
Sbjct: 175 DFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESLCLQDPLVLSSSFNRPNIYYE 234
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
VRYKDLLDDAYADL SVLK+ GD CAIVYCLERTTCD LSA+LS GIS AAYHAGLN+K
Sbjct: 235 VRYKDLLDDAYADLSSVLKSCGDICAIVYCLERTTCDGLSAHLSKNGISSAAYHAGLNNK 294
Query: 183 ARSSVLDDWISSRKQVVVATVAFG 206
RSSVLDDWISS+ QVVVATVAFG
Sbjct: 295 LRSSVLDDWISSKIQVVVATVAFG 318
>gi|334322907|ref|XP_001377617.2| PREDICTED: ATP-dependent DNA helicase Q5 [Monodelphis domestica]
Length = 996
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 156/345 (45%), Positives = 217/345 (62%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + KI DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 108 QERKKILMDLEKEKPQTKILYITPEMAASASFQPILNSLVSRHLLSYLVVDEAHCVSQWG 167
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LRN +PD P +ALTATA KVQ+DV+ +L L+ P+ + K+S R NLF
Sbjct: 168 HDFRPDYLRLGALRNRIPDAPCVALTATATQKVQEDVVTALKLRQPVAIFKTSCFRANLF 227
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGD--------TCAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++KDLL D Y +L LKA G +C I+YC R C++L+ LS+ G+
Sbjct: 228 YDVQFKDLLGDPYGNLKDFCLKALGQKNDKGAFSSCGIIYCRTREACEQLATELSSRGVK 287
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL + R V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 288 AKAYHAGLKAEDRMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 347
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD LPS LYY DR ++ F++ K SK + ++ S K S++ F +VD
Sbjct: 348 ESGRAGRDGLPSWCRLYYSRKDRDQVSFLIKKEISKLQEKRGNKD-SDKASMAAFEAVVD 406
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD CK P + K L L
Sbjct: 407 FCEKLGCRHAAIAKYFGDAPPP--CFKGCDHCKSPGAIKKQLDAL 449
>gi|291001553|ref|XP_002683343.1| predicted protein [Naegleria gruberi]
gi|284096972|gb|EFC50599.1| predicted protein [Naegleria gruberi]
Length = 402
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 207/312 (66%), Gaps = 15/312 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI DL+SG P+ +LLYVTPEL T+ F S ++ + SR L+L+AIDE+HCISSWGHDF
Sbjct: 95 KIQSDLESGNPNYKLLYVTPELLTSNQTFQSIMRLLASRDQLSLIAIDESHCISSWGHDF 154
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
R S+R+L+ L++ P VPI+ALTATA KV+ D++ESL ++NP +SFNRPN+ YE+R
Sbjct: 155 RKSFRQLNFLKDTFPQVPIIALTATATEKVRSDIVESLKMRNPKCFITSFNRPNISYEIR 214
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSA----GG---ISCAAYHA 177
YKD+L + Y DL + L + C I+YC R DEL LS GG SC +YHA
Sbjct: 215 YKDILHNPYEDLRNFLNEHAQECGIIYCRTRNQVDELVLQLSMEKDKGGKDLFSCKSYHA 274
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL R +V DW+ + +++V T+A+GMGID+KDVR V H+ +PKS+E FYQESGRAG
Sbjct: 275 GLKLSERKTVQTDWLEGKTKIIVGTIAYGMGIDKKDVRFVVHYGMPKSLEGFYQESGRAG 334
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG 297
RD +KSLLYY ++ ++F++S+ + E+ F+++ + CE +
Sbjct: 335 RDGKKAKSLLYYCSREKNSIQFLISREEKLTQDRILAVEQG-------FNKVCEMCETAC 387
Query: 298 CRRKKILESFGE 309
CRRK +LE FGE
Sbjct: 388 CRRKFVLEFFGE 399
>gi|326930778|ref|XP_003211518.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Meleagris gallopavo]
Length = 1055
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/401 (41%), Positives = 238/401 (59%), Gaps = 26/401 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL + KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 112 QEKKTILADLANEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWG 171
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ +P+ P +ALTATA +VQ+D++ +L L+ PL K+ R NLF
Sbjct: 172 HDFRPDYLRLGTLRSRIPNTPCVALTATATKQVQEDIVTALKLKQPLATFKTPCFRSNLF 231
Query: 121 YEVRYKDLLDDAYA---DLC-SVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D YA D C L+ T C IVYC R CD+L+ LS G+
Sbjct: 232 YDVQFKELLTDPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVK 291
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 292 AKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 351
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K SK + T + S K +++ F +V
Sbjct: 352 ESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELSKIQEKKGTLKESDKAAMTAFDAIVS 411
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
+CE GCR I + FG+ P C CD CK+P + + L L N++S+ I
Sbjct: 412 FCEELGCRHAAIAKYFGDVTPP--CNKCCDYCKNPEAVKRQLEALERC---SNNWSKTCI 466
Query: 352 ----SSQDMTD-----GGQY--SEFWNRDDEASGSEEDISD 381
SS D D GG+ F D+E+SG+ ++ ++
Sbjct: 467 GPTGSSWDSYDPELYEGGRRGCGGFSRYDEESSGNGDEANE 507
>gi|340377955|ref|XP_003387494.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Amphimedon
queenslandica]
Length = 906
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 203/334 (60%), Gaps = 13/334 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
++KI L P ++LLYVTPE+ AT F L ++H G + +AIDEAHC+S WGHD
Sbjct: 105 RSKIASQLKLKSPPIKLLYVTPEMVATSNFRETLTRLHRNGGVVFIAIDEAHCVSEWGHD 164
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y KL LR +P VPI+ALTATA P+VQ+DV+ SL ++ P+ V KSS RPNLFY
Sbjct: 165 FRPDYLKLGELRGVVPGVPIIALTATATPRVQEDVVRSLKMREPVSVFKSSCFRPNLFYN 224
Query: 123 VRYKDLLDDAYADLC-----SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
V +K+ L D DLC ++ + + C I+YC R C EL+ +++ GI YHA
Sbjct: 225 VSFKETLKDPLKDLCDYITEALTSSTTEGCGIIYCRTREGCGELAGRITSKGILAKPYHA 284
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL RS V + W+ ++VAT++FGMG+D+ +VR V H+ +PK +EA+YQESGRAG
Sbjct: 285 GLKSNERSQVQEQWMKGVVPIIVATISFGMGVDKANVRFVVHWTLPKGIEAYYQESGRAG 344
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQS-----KNSQSFSTRERSSKKSISDFSQMVDY 292
RD L + +YY DR ++ F+L K S K F + RS + + F +V Y
Sbjct: 345 RDGLKAYCRIYYSRFDRDQLLFLLQKEISEKETKKGKSQFKSASRSKEATEKSFETLVKY 404
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHP 326
CE + CR I + F + IP CK+ CD CK P
Sbjct: 405 CEEANCRHTVIAQYFKDPIPE--CKDLCDVCKMP 436
>gi|290490730|dbj|BAI79325.1| RecQ5 helicase [Gallus gallus]
Length = 1052
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 235/401 (58%), Gaps = 26/401 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL S KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 112 QEKKTILADLASEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWG 171
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR +P+ P +ALTATA +VQ D++ +L L+ PL K+ R NLF
Sbjct: 172 HDFRPDYLRLGTLRTRIPNTPCVALTATATKQVQDDIVTALKLKQPLATFKTPCFRSNLF 231
Query: 121 YEVRYKDLLDDAYA---DLC-SVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D YA D C L+ T C IVYC R CD+L+ LS G+
Sbjct: 232 YDVQFKELLTDPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVK 291
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 292 AKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 351
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K SK + T + S K ++ F +V
Sbjct: 352 ESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELSKIQEKKGTLKESDKSVMTAFDAIVS 411
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
+CE GCR I + FG+ P C CD CK+P + + L L N++S+ I
Sbjct: 412 FCEELGCRHAAIAKYFGDVTPP--CNKCCDYCKNPEAVKRQLEALERC---SNNWSKTCI 466
Query: 352 ----SSQDMTD-----GGQYS--EFWNRDDEASGSEEDISD 381
SS D D GG+ F D+E+SG+ ++ ++
Sbjct: 467 GPTGSSWDSYDPELYEGGRRGCRGFSRYDEESSGNGDEANE 507
>gi|363740670|ref|XP_001233565.2| PREDICTED: ATP-dependent DNA helicase Q5 [Gallus gallus]
Length = 1052
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/401 (41%), Positives = 235/401 (58%), Gaps = 26/401 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL S KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 112 QEKKTILADLASEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWG 171
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR +P+ P +ALTATA +VQ D++ +L L+ PL K+ R NLF
Sbjct: 172 HDFRPDYLRLGTLRTRIPNTPCVALTATATKQVQDDIVTALKLKQPLATFKTPCFRSNLF 231
Query: 121 YEVRYKDLLDDAYA---DLC-SVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D YA D C L+ T C IVYC R CD+L+ LS G+
Sbjct: 232 YDVQFKELLTDPYANLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVK 291
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 292 AKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 351
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K SK + T + S K ++ F +V
Sbjct: 352 ESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELSKIQEKKGTLKESDKSVMTAFDAIVS 411
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
+CE GCR I + FG+ P C CD CK+P + + L L N++S+ I
Sbjct: 412 FCEELGCRHAAIAKYFGDVTPP--CNKCCDYCKNPEAVKRQLEALERC---SNNWSKTCI 466
Query: 352 ----SSQDMTD-----GGQYS--EFWNRDDEASGSEEDISD 381
SS D D GG+ F D+E+SG+ ++ ++
Sbjct: 467 GPTGSSWDSYDPELYEGGRRGCRGFSRYDEESSGNGDEANE 507
>gi|224075156|ref|XP_002190226.1| PREDICTED: ATP-dependent DNA helicase Q5 [Taeniopygia guttata]
Length = 1087
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 209/340 (61%), Gaps = 12/340 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL S KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 150 QEKKTILADLASEKPQVKLLYITPEMAAASSFQPTLNSLVSRNLLSYLVIDEAHCVSQWG 209
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L SLR+ +P P +ALTATA +VQ+DV+ +L L+ PL K+ R NLF
Sbjct: 210 HDFRPDYLRLGSLRSRIPHTPCVALTATATKQVQEDVVAALKLKQPLSTFKTPCFRSNLF 269
Query: 121 YEVRYKDLLDDAYA---DLC-SVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D YA D C L+ G T C IVYC R CD+L+ LS G+
Sbjct: 270 YDVQFKELLTDPYANLKDFCLKALEVKGATGVYSGCGIVYCRMRDVCDQLAIELSYRGLK 329
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 330 AKAYHAGLKAAERTSVQNEWMEEKIPVIVATISFGMGVDKGNVRFVAHWNIAKSMAGYYQ 389
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K S + T + S K ++ F +V
Sbjct: 390 ESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELSNIQEKKGTLKESDKAVMTAFDAIVS 449
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
+CE GCR I + FG+ P C CD CK+P + +
Sbjct: 450 FCEELGCRHAAIAKYFGDVTPP--CNKCCDFCKNPEAVKR 487
>gi|390349584|ref|XP_795300.3| PREDICTED: ATP-dependent DNA helicase Q5-like [Strongylocentrotus
purpuratus]
Length = 1223
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/383 (39%), Positives = 228/383 (59%), Gaps = 29/383 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ DL S KP +++LY+TPE AT FM+ LK +++RGL N + +DEAHC+S WGHDFRP
Sbjct: 155 VMSDLYSKKPKIKMLYITPETAATSTFMTILKNLNNRGLFNGIVVDEAHCVSQWGHDFRP 214
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYEVRY 125
Y KL +L P V +ALTATA V+KD+++ L ++ P+ ++ R NLFY+V Y
Sbjct: 215 CYLKLGALHKEYPSVACVALTATATDNVRKDIIQQLHMRAPVTEFRAGCFRENLFYDVVY 274
Query: 126 KDLLDDAYADL----CSVLK-----ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
KD+L+D L +L+ N C IVYC R C ++ LS G+ AYH
Sbjct: 275 KDVLEDPLGHLKDFGLKLLQKDEALGNASGCGIVYCRTRDACVTVAGSLSRQGLISRAYH 334
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
G+ R+SV + W++ + +V+VAT++FGMG+D+ VR V H+NIPKSM +YQESGRA
Sbjct: 335 GGMKAADRTSVQEQWMNGQVKVIVATISFGMGVDKATVRFVAHYNIPKSMAGYYQESGRA 394
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSK-----NQSKNSQSFSTRE-RSSKKSISDFSQMV 290
GRD +PS+ LYY +R ++ F++++ N K + FS+ + SK S+ F +V
Sbjct: 395 GRDGIPSRCRLYYSRQERNQVAFLITREMACANSKKRKRKFSSSPGKPSKASMQSFEALV 454
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVL----QKNHF 346
+CE + CR + I + F +++P C + CD CK P ++ K + E+ ++ +KNH
Sbjct: 455 KFCEEAKCRHESIAKYFDDKLPS--CGSMCDVCKTPEVVKKRIDEMQRGIMGGPAKKNHM 512
Query: 347 SQIFISSQ-------DMTDGGQY 362
+ +I D+ GG+Y
Sbjct: 513 GRTYIEKNPLNVHDDDLYGGGRY 535
>gi|449283029|gb|EMC89732.1| ATP-dependent DNA helicase Q5 [Columba livia]
Length = 1016
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/401 (40%), Positives = 238/401 (59%), Gaps = 26/401 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL S KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 104 QEKKTILADLASEKPQVKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWG 163
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR +P+ P +ALTATA +VQ+D++ +L L+ PL K+ R NLF
Sbjct: 164 HDFRPDYLRLGTLRTRIPNTPCVALTATATKQVQEDIVAALKLKQPLSTFKTPCFRSNLF 223
Query: 121 YEVRYKDLLDDAYA---DLC----SVLKANG--DTCAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y D C V ++G C IVYC R CD+L+ LS G+
Sbjct: 224 YDVQFKELLTDPYTNLKDFCLKALEVKNSSGVYSGCGIVYCRMRDVCDQLAIELSYRGVK 283
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 284 AKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 343
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K + + T + S K ++ F +V+
Sbjct: 344 ESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKELANIQEKKGTLKESDKAVMTAFDAIVN 403
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
+CE GCR I + FG+ P C CD CK+P + + L L N +S+ I
Sbjct: 404 FCEELGCRHAAIAKYFGDVTPP--CNKCCDYCKNPGAVKRQLESLERCT---NSWSKTCI 458
Query: 352 ----SSQD-----MTDGGQYS--EFWNRDDEASGSEEDISD 381
SS+D + +GG+ F + D+E+SG+ ++ ++
Sbjct: 459 GPTGSSRDNYDPELYEGGRRGCRGFSSYDEESSGNGDEANE 499
>gi|395533035|ref|XP_003768569.1| PREDICTED: ATP-dependent DNA helicase Q5 [Sarcophilus harrisii]
Length = 995
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 236/392 (60%), Gaps = 20/392 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K KI DL++ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 108 QEKKKILMDLENEKPQTKLLYITPEMAASASFQPILNSLVSRHLLSYLVVDEAHCVSQWG 167
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR +P P +ALTATA +VQ+DV+ +L L+ P+ + K+ R NLF
Sbjct: 168 HDFRPDYLRLGALRKRIPHAPCVALTATATQQVQEDVVTALKLRQPIAIFKTPCFRANLF 227
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++KDLL D Y +L LKA G C IVYC R C++++ LS+ GI
Sbjct: 228 YDVQFKDLLGDPYGNLKDFCLKALGQKNDKGAFPGCGIVYCRMREACEQVAKELSSRGIK 287
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL + R V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 288 AKAYHAGLKTEDRMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 347
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K SK + ++ K S++ F +VD
Sbjct: 348 ESGRAGRDGQPSWCRLYYSRNDRDQVCFLIKKEISKLQEKRGNKD-CDKASMAAFESLVD 406
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELT-SAVLQKNHF--SQ 348
+CE GCR I + FG+ P C CD CK P + K L L S+ K S+
Sbjct: 407 FCEKVGCRHAAIAKYFGDAPPS--CSKGCDHCKSPGAVRKQLDALERSSSWSKTQIRSSR 464
Query: 349 IFISSQDMTDGGQ--YSEF--WNRDDEASGSE 376
S ++ +GG+ Y F ++ D E++G+E
Sbjct: 465 GNDSDSELYEGGRRGYDGFGRYDEDSESNGAE 496
>gi|281350039|gb|EFB25623.1| hypothetical protein PANDA_008576 [Ailuropoda melanoleuca]
Length = 979
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 210/345 (60%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 98 QEKKELLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 157
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 158 HDFRPDYLRLGTLRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 217
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G+S
Sbjct: 218 YDVQFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSHRGVS 277
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 278 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 337
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V
Sbjct: 338 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAVLAFDALVT 396
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CEG GCR I + FG+ P C CD C+ P L K L L
Sbjct: 397 FCEGLGCRHAAIAKYFGDAPPA--CTKGCDHCRDPGALRKQLDAL 439
>gi|301768981|ref|XP_002919891.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Ailuropoda
melanoleuca]
Length = 985
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 210/345 (60%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 104 QEKKELLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 163
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 164 HDFRPDYLRLGTLRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 223
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G+S
Sbjct: 224 YDVQFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSHRGVS 283
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 284 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 343
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V
Sbjct: 344 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAVLAFDALVT 402
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CEG GCR I + FG+ P C CD C+ P L K L L
Sbjct: 403 FCEGLGCRHAAIAKYFGDAPPA--CTKGCDHCRDPGALRKQLDAL 445
>gi|348533151|ref|XP_003454069.1| PREDICTED: ATP-dependent DNA helicase Q5 [Oreochromis niloticus]
Length = 1040
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/386 (40%), Positives = 224/386 (58%), Gaps = 17/386 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I DL S P L+LLY+TPE+ A+P F L + SRGLL+ +A+DEAHC+S WGHDFRP
Sbjct: 101 ILADLGSSNPKLKLLYITPEMVASPSFHPCLMDLCSRGLLSYLAVDEAHCVSQWGHDFRP 160
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y KL LR L VP LALTATA VQ+D+++SL L +PL + R NL Y+V ++
Sbjct: 161 DYLKLGELRARLQGVPCLALTATAPKNVQEDIIQSLKLSSPLSFLTPVFRSNLHYDVIFR 220
Query: 127 DLLDDAYADLCSVLK--------ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
+LL + Y L + +K +NG C IVYC R C+ ++ L+ G+ YHAG
Sbjct: 221 ELLPNPYVHLHAFIKKTLSLGAGSNGQGCGIVYCRTREGCETVAHQLTKLGVVAKPYHAG 280
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+N+ KS+ ++YQESGRAGR
Sbjct: 281 LKPTDRTGVQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGR 340
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LPS YY D+ ++ F++ + ++ + + S K +++DF MV +CE GC
Sbjct: 341 DGLPSACRTYYSPRDKEQINFLIRQEVARKQEKRGFAKDSDKTAMTDFEAMVSFCEQEGC 400
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQ------IFIS 352
R I + FG P C +CD C++P L+ L E +A+ K +Q F
Sbjct: 401 RHATISKFFGNTAPN--CAGACDYCRNPKLVRAQL-ERAAALSTKIGAAQSSEPKGAFGF 457
Query: 353 SQDMTDGGQYSEFWNRDDEASGSEED 378
D GG+ + R DE G ED
Sbjct: 458 QPDTYGGGKKGYGFERYDEGEGYSED 483
>gi|432870056|ref|XP_004071785.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Oryzias latipes]
Length = 989
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/335 (41%), Positives = 206/335 (61%), Gaps = 10/335 (2%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I DL S P L+LLY+TPE+ A+P F L + SR LL+ VA+DEAHC+S WGHDFRP
Sbjct: 100 ILADLGSSSPKLKLLYITPEMVASPSFQPCLTDLCSRSLLSYVAVDEAHCVSQWGHDFRP 159
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y KL LR +P VP LALTATA VQ+D+++SL L +PL + R NL+Y+V ++
Sbjct: 160 DYLKLGELRARMPGVPCLALTATAPKNVQEDIVKSLRLSSPLSFVTPVFRSNLYYDVIFR 219
Query: 127 DLLDDAYADLCSVLK--------ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
DLL + Y L + ++ +NG C IVYC R C+ ++ L+ G+ YHAG
Sbjct: 220 DLLPNPYVHLHAFIRKALEMENGSNGQGCGIVYCRTREGCETVAYQLTKLGVLAKPYHAG 279
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L R+ ++W+ + V+VAT++FGMG+D+ +VR V H+N+ KS+ ++YQESGRAGR
Sbjct: 280 LKAGDRTEAQNEWMQGKVLVIVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGR 339
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LPS YY D+ ++ F++ + ++ + + + S K +I+DF MV +CE C
Sbjct: 340 DGLPSSCRTYYSPKDKEQINFLIRQEVNRRQEKRGSAKESDKSAITDFEAMVLFCEQESC 399
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
R I + FG + P C +CD C++P ++ L
Sbjct: 400 RHASISKFFGNKTPN--CAGACDFCRNPKMVRAQL 432
>gi|410981700|ref|XP_003997204.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Felis catus]
Length = 960
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 211/345 (61%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 77 QEKKELLSDLEQEKPQTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWG 136
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 137 HDFRPDYLRLGTLRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 196
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 197 YDVQFKELLSDPYGNLKDFCLKALGQKTAKGSLSGCGIVYCRTREACEQLATELSYRGVN 256
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 257 AKAYHAGLKPSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 316
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + ++ S K ++ F +V
Sbjct: 317 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKA-SDKAAVLAFDALVA 375
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD C++P L K L L
Sbjct: 376 FCEELGCRHAAIAKYFGDAPPA--CTKGCDHCRNPVALRKQLEAL 418
>gi|410902085|ref|XP_003964525.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Takifugu rubripes]
Length = 954
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/386 (38%), Positives = 225/386 (58%), Gaps = 18/386 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I DL S P L+LLY+TPE+ A+P F L + SRGLL+ +A+DEAHC+S WGHDFRP
Sbjct: 102 ILADLGSSSPKLKLLYITPEMVASPSFQPCLTDLCSRGLLSYLAVDEAHCVSQWGHDFRP 161
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y KL SLR +P VP LALTATA VQ+D+++SL + +PL + R NL Y+V ++
Sbjct: 162 DYLKLGSLRARMPGVPCLALTATAPKNVQEDIVKSLNMCSPLSFLTPVFRSNLHYDVIFR 221
Query: 127 DLLDDAYADLCSVLK--------ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
+++ + Y L + +K +N C IVYC R C+ ++ L+ G+ AYHAG
Sbjct: 222 EIVPNPYVHLYAFIKKALEQEKNSNPQGCGIVYCRTREACETVAYQLTKLGVLAKAYHAG 281
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L R+ V ++W+ + V+VAT++FGMG+D+ VR V H+N+ KS+ ++YQESGRAGR
Sbjct: 282 LKAGDRTEVQNEWMQGKVLVIVATISFGMGVDKATVRFVAHWNLAKSLASYYQESGRAGR 341
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LPS +YY D+ ++ F++ + + + + + K +I+DF MV +C C
Sbjct: 342 DGLPSSCRIYYSPRDKEQINFLIHQEVKRKQEKRGFEKDTDKAAITDFEAMVSFCVQEAC 401
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVL------QKNHFSQIFIS 352
R I FG++ P C +CD C++P + L ++AVL Q N F
Sbjct: 402 RHGTISRFFGDKAPN--CAGACDYCRNPKAVRAQLE--SAAVLSTKLQAQSNEPRGAFGF 457
Query: 353 SQDMTDGGQYSEFWNRDDEASGSEED 378
D+ +GG+ + R ++ S +D
Sbjct: 458 QSDLYEGGKKGYGFERQEDGGHSGDD 483
>gi|410981698|ref|XP_003997203.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Felis catus]
Length = 987
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 211/345 (61%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 104 QEKKELLSDLEQEKPQTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWG 163
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 164 HDFRPDYLRLGTLRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 223
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 224 YDVQFKELLSDPYGNLKDFCLKALGQKTAKGSLSGCGIVYCRTREACEQLATELSYRGVN 283
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 284 AKAYHAGLKPSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 343
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + ++ S K ++ F +V
Sbjct: 344 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKA-SDKAAVLAFDALVA 402
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD C++P L K L L
Sbjct: 403 FCEELGCRHAAIAKYFGDAPPA--CTKGCDHCRNPVALRKQLEAL 445
>gi|426346800|ref|XP_004041059.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Gorilla gorilla
gorilla]
Length = 979
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 235/397 (59%), Gaps = 26/397 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 140 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 260 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFIS 352
CE GCR I + FG+ +P C CD C++P + + L A+ + + +S+ I
Sbjct: 379 CEELGCRHAAIAKYFGDVLPA--CAKGCDHCQNPTAVRRQL----EALERSSSWSKTCIG 432
Query: 353 SQ-------DMTDGGQ--YSEFWNRDDEASGSEEDIS 380
++ +GG+ Y F +R DE SG D S
Sbjct: 433 PSQGNGFDPELYEGGRKGYGGF-SRYDEGSGGSGDES 468
>gi|426346798|ref|XP_004041058.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Gorilla gorilla
gorilla]
Length = 1006
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 235/397 (59%), Gaps = 26/397 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFIS 352
CE GCR I + FG+ +P C CD C++P + + L A+ + + +S+ I
Sbjct: 406 CEELGCRHAAIAKYFGDVLPA--CAKGCDHCQNPTAVRRQL----EALERSSSWSKTCIG 459
Query: 353 SQ-------DMTDGGQ--YSEFWNRDDEASGSEEDIS 380
++ +GG+ Y F +R DE SG D S
Sbjct: 460 PSQGNGFDPELYEGGRKGYGGF-SRYDEGSGGSGDES 495
>gi|440895196|gb|ELR47457.1| ATP-dependent DNA helicase Q5 [Bos grunniens mutus]
Length = 987
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 212/345 (61%), Gaps = 12/345 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 105 VQERKELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQW 164
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L D P +ALTATA P+V++DV +L L+ P+ K+ R NL
Sbjct: 165 GHDFRPDYLRLGALRSRLADAPCVALTATATPQVREDVFAALHLKQPVATFKTPCFRANL 224
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGIS 171
FY+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 225 FYDVQFKELLPDPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLATELSYRGVN 284
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 285 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 344
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY DR ++ F++ K +K + + S K ++ F +V
Sbjct: 345 ESGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAVLAFDALVA 403
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE SGCR I + FG+ P C CD C++P + K L L
Sbjct: 404 FCEESGCRHAAIAKYFGDSPPA--CTKGCDCCQNPTDVRKQLDAL 446
>gi|300796980|ref|NP_001179255.1| ATP-dependent DNA helicase Q5 [Bos taurus]
gi|296476023|tpg|DAA18138.1| TPA: RecQ protein-like 5-like [Bos taurus]
Length = 987
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/345 (42%), Positives = 212/345 (61%), Gaps = 12/345 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 105 VQERKELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQW 164
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L D P +ALTATA P+V++DV +L L+ P+ K+ R NL
Sbjct: 165 GHDFRPDYLRLGALRSRLADAPCVALTATATPQVREDVFAALHLKQPVATFKTPCFRANL 224
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGIS 171
FY+V++K+LL D Y +L LKA G C I+YC R C++L+ LS G++
Sbjct: 225 FYDVQFKELLPDPYGNLRDFCLKALGQKADKGLSGCGIIYCRTREACEQLATELSYRGVN 284
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 285 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 344
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY DR ++ F++ K +K + + S K ++ F +V
Sbjct: 345 ESGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAVLAFDALVA 403
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE SGCR I + FG+ P C CD C++P + K L L
Sbjct: 404 FCEESGCRHAAIAKYFGDSPPA--CTKGCDCCQNPTGVRKQLDAL 446
>gi|18485510|ref|NP_569721.1| ATP-dependent DNA helicase Q5 [Mus musculus]
gi|17511226|dbj|BAB79232.1| RecQ helicase protein-like 5 beta [Mus musculus]
gi|148702584|gb|EDL34531.1| RecQ protein-like 5, isoform CRA_b [Mus musculus]
gi|162317946|gb|AAI56759.1| RecQ protein-like 5 [synthetic construct]
Length = 982
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 214/346 (61%), Gaps = 13/346 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 106 VQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLVSRNLLSYLVVDEAHCVSQW 165
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNL 119
GHDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NL
Sbjct: 166 GHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVASFKTPCFRANL 225
Query: 120 FYEVRYKDLLDDAYADLCSV-LKA------NGDT--CAIVYCLERTTCDELSAYLSAGGI 170
FY+V++K+L+ D Y +L LKA NG + C IVYC R C++L+ LS+ G+
Sbjct: 226 FYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYCRTREACEQLAIELSSRGV 285
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
+ AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +Y
Sbjct: 286 NAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYY 345
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V
Sbjct: 346 QESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKLQEKRGNKP-SDKATLLAFDALV 404
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD C++P + K L L
Sbjct: 405 TFCEEVGCRHAAIAKYFGDAPPA--CAKGCDYCQNPAAITKKLDAL 448
>gi|23503567|dbj|BAC20378.1| RECQL5 protein [Gallus gallus]
Length = 446
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 203/334 (60%), Gaps = 12/334 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K I DL S KP ++LLY+TPE+ A F L + SR LL+ + IDEAHC+S WG
Sbjct: 112 QEKKTILADLASEKPQIKLLYITPEMAAASSFQPTLNSLVSRNLLSYLIIDEAHCVSQWG 171
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR +P+ P +ALTATA + Q D++ +L L+ PL K+ R NLF
Sbjct: 172 HDFRPDYLRLGTLRTRIPNTPCVALTATATKQDQDDIVTALKLKQPLATFKTPCFRSNLF 231
Query: 121 YEVRYKDLLDDAYA---DLC-SVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D YA D C L+ T C IVYC R CD+L+ LS G+
Sbjct: 232 YDVQFKELLTDPYAHLKDFCLKALEVKNTTGVYSGCGIVYCRMRDVCDQLAIELSYRGVK 291
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+SV ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 292 AKAYHAGLKAADRTSVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 351
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD P LYY +DR ++ F++ K SK + T + S K ++ F +V
Sbjct: 352 ESGRAGRDGKPPCCRLYYSRNDRDQVSFLIKKELSKIQEKKGTLKESDKSVMTAFDAIVS 411
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKH 325
+CE GCR I + FG+ P C CD CK+
Sbjct: 412 FCEELGCRHAAIAKYFGDVTPP--CNKCCDYCKN 443
>gi|221044892|dbj|BAH14123.1| unnamed protein product [Homo sapiens]
Length = 1018
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 212/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ +P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEAL 447
>gi|444727835|gb|ELW68313.1| ATP-dependent DNA helicase Q5 [Tupaia chinensis]
Length = 973
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLCDLEQDKPRTKLLYITPEMAASASFQPTLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 167 HDFRPDYLRLGVLRSRLGHTPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKA-------NGDTCAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G+S
Sbjct: 227 YDVQFKELISDPYGNLRDFCLKALGQKADEGGSGCGIVYCRTREACEQLAIELSCRGVSA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +W+ R V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKAAERTLVQSEWMEERVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIKKEIAKLQEKRGNKA-SDKATLLAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + LG L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPAAVRRQLGAL 447
>gi|148342513|gb|ABQ59039.1| RECQL5 protein [Homo sapiens]
Length = 991
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 212/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ +P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEAL 447
>gi|148612816|ref|NP_004250.4| ATP-dependent DNA helicase Q5 isoform 1 [Homo sapiens]
gi|22654276|sp|O94762.2|RECQ5_HUMAN RecName: Full=ATP-dependent DNA helicase Q5; AltName: Full=DNA
helicase, RecQ-like type 5; Short=RecQ5; AltName:
Full=RecQ protein-like 5
gi|7959113|dbj|BAA95953.1| DNA helicase recQ5 beta [Homo sapiens]
gi|119609695|gb|EAW89289.1| RecQ protein-like 5, isoform CRA_a [Homo sapiens]
gi|119609697|gb|EAW89291.1| RecQ protein-like 5, isoform CRA_a [Homo sapiens]
Length = 991
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 212/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ +P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEAL 447
>gi|39645296|gb|AAH63440.1| RecQ protein-like 5 [Homo sapiens]
gi|119609698|gb|EAW89292.1| RecQ protein-like 5, isoform CRA_c [Homo sapiens]
Length = 964
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 212/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 140 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 260 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ +P C CD C++P + + L L
Sbjct: 379 CEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEAL 420
>gi|73965025|ref|XP_540436.2| PREDICTED: ATP-dependent DNA helicase Q5 [Canis lupus familiaris]
Length = 989
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 209/345 (60%), Gaps = 13/345 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+P F L + SR LL+ + +DEAHC+S WG
Sbjct: 103 QEKKELLSDLEREKPQTKLLYITPEMAASPSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 162
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA +VQ+DV +L L+ P+ K+ R NLF
Sbjct: 163 HDFRPDYLRLGTLRSRLAHAPCIALTATATLQVQEDVFAALHLKQPVATFKTPCFRANLF 222
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 223 YDVQFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSYRGVN 282
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 283 AKAYHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 342
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V
Sbjct: 343 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAILAFDALVT 401
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD C+ P L K L L
Sbjct: 402 FCEELGCRHAAIAKYFGDAPPA--CTKGCDHCRDPAALRKRLDAL 444
>gi|338711535|ref|XP_001492159.3| PREDICTED: ATP-dependent DNA helicase Q5, partial [Equus caballus]
Length = 955
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/344 (42%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 106 QEKKELLSDLEQEKPRTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 165
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+V++DV +L L+ P+ + K+ R NLF
Sbjct: 166 HDFRPDYLRLGALRSRLAHAPCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANLF 225
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 226 YDVQFKELLSDPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSYRGVNA 285
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 286 KAYHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 345
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V +
Sbjct: 346 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAVVAFDALVSF 404
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + K L L
Sbjct: 405 CEELGCRHAAIAKYFGDAPPA--CTKGCDHCQNPAAVRKQLSAL 446
>gi|156363725|ref|XP_001626191.1| predicted protein [Nematostella vectensis]
gi|156213059|gb|EDO34091.1| predicted protein [Nematostella vectensis]
Length = 424
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 205/330 (62%), Gaps = 12/330 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ +DL KP+++LLY+TPEL ATPGF L ++ R LL+L A+DEAHC+S WGHD
Sbjct: 98 RKRVMKDLYFVKPTVKLLYITPELAATPGFQKVLDSLYKRKLLSLFAVDEAHCVSQWGHD 157
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ-NPLVLKSSFNRPNLFYE 122
FRP Y +L LRN DV +ALTATA +V++D++ +L +Q N V KS RPNL+Y+
Sbjct: 158 FRPDYLRLGKLRNKYKDVAWVALTATATSRVKEDILTALHMQSNVAVFKSQCYRPNLYYD 217
Query: 123 VRYKDLLDDAYADLCSVLKA--------NGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
+ +K+LL+D YADL A I+YC R C E+++ LS G+S
Sbjct: 218 ISFKELLEDPYADLKQFADAALEDEDSGEAKGSGIIYCRTRDACQEVASRLSRKGLSAKP 277
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R V +W+ + V+ AT++FGMG+D+ DVR V H+++P+SME +YQESG
Sbjct: 278 YHAGLKSDKRDKVQQEWMEGKVAVICATISFGMGVDKGDVRFVAHWSLPQSMEGYYQESG 337
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +R ++ F++ + K + + +++ +S F +V+YCE
Sbjct: 338 RAGRDGQPSYCRLYYSRAERDQVLFLIKNDMKKRLKKANAAQKNKAVQVS-FQAVVEYCE 396
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACK 324
CR +I + FG+++P C CD CK
Sbjct: 397 EPSCRHGRIAKYFGDEMP--QCNKGCDYCK 424
>gi|114670488|ref|XP_001144082.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Pan
troglodytes]
gi|410207584|gb|JAA01011.1| RecQ protein-like 5 [Pan troglodytes]
gi|410261024|gb|JAA18478.1| RecQ protein-like 5 [Pan troglodytes]
gi|410299660|gb|JAA28430.1| RecQ protein-like 5 [Pan troglodytes]
gi|410336147|gb|JAA37020.1| RecQ protein-like 5 [Pan troglodytes]
Length = 991
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 12/342 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WGHD
Sbjct: 109 RKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHD 168
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLFY+
Sbjct: 169 FRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYD 228
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++ A
Sbjct: 229 VQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKA 288
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQESG
Sbjct: 289 YHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 348
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +DR ++ F++ K +K Q + S K +I F +V +CE
Sbjct: 349 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK-LQVKRGNKASDKATIMAFDALVTFCE 407
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
GCR I + FG+ +P C CD C++P + + L L
Sbjct: 408 ELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRQLEAL 447
>gi|332849063|ref|XP_001143872.2| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Pan
troglodytes]
Length = 964
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 12/342 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WGHD
Sbjct: 82 RKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHD 141
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLFY+
Sbjct: 142 FRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYD 201
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++ A
Sbjct: 202 VQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKA 261
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQESG
Sbjct: 262 YHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 321
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +DR ++ F++ K +K Q + S K +I F +V +CE
Sbjct: 322 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK-LQVKRGNKASDKATIMAFDALVTFCE 380
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
GCR I + FG+ +P C CD C++P + + L L
Sbjct: 381 ELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRQLEAL 420
>gi|397484324|ref|XP_003813327.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Pan paniscus]
Length = 991
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 12/342 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WGHD
Sbjct: 109 RKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHD 168
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLFY+
Sbjct: 169 FRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYD 228
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++ A
Sbjct: 229 VQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKA 288
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQESG
Sbjct: 289 YHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 348
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +DR ++ F++ K +K Q + S K +I F +V +CE
Sbjct: 349 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK-LQVKRGNKASDKATIMAFDALVTFCE 407
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
GCR I + FG+ +P C CD C++P + + L L
Sbjct: 408 ELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRQLEAL 447
>gi|397484326|ref|XP_003813328.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Pan paniscus]
Length = 964
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 211/342 (61%), Gaps = 12/342 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WGHD
Sbjct: 82 RKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHD 141
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLFY+
Sbjct: 142 FRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYD 201
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++ A
Sbjct: 202 VQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKA 261
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQESG
Sbjct: 262 YHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 321
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +DR ++ F++ K +K Q + S K +I F +V +CE
Sbjct: 322 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK-LQVKRGNKASDKATIMAFDALVTFCE 380
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
GCR I + FG+ +P C CD C++P + + L L
Sbjct: 381 ELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRQLEAL 420
>gi|197102262|ref|NP_001126651.1| ATP-dependent DNA helicase Q5 [Pongo abelii]
gi|55732243|emb|CAH92825.1| hypothetical protein [Pongo abelii]
Length = 990
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 212/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNTLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQETDKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNNWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKP-SDKATVMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ +P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRQLEAL 447
>gi|403280534|ref|XP_003931772.1| PREDICTED: ATP-dependent DNA helicase Q5 [Saimiri boliviensis
boliviensis]
Length = 990
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGRAPCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQKADKRLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K SI F +V +
Sbjct: 347 SGRAGRDGNPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKASIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPTAVRRQLEAL 447
>gi|426238468|ref|XP_004013175.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Ovis aries]
Length = 958
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 212/345 (61%), Gaps = 12/345 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 78 VQERKELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQW 137
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L D P +ALTATA P+V++DV +L L+ P+ + K+ R NL
Sbjct: 138 GHDFRPDYLRLGALRSRLADAPCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANL 197
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDTC-------AIVYCLERTTCDELSAYLSAGGIS 171
FY+V++K+LL D Y +L LKA G I+YC R C++L+ LS G++
Sbjct: 198 FYDVQFKELLPDPYGNLRDFCLKALGQKADKGLSGGGIIYCRTREACEQLAIELSYRGVN 257
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 258 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 317
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY DR ++ F++ K +K + + S K ++ F +V
Sbjct: 318 ESGRAGRDGKPSWCRLYYSRSDRDQVSFLIKKEVAKLQEKRGNKA-SDKAAVLAFDALVA 376
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE SGCR I + FG+ P C CD C++P + K L L
Sbjct: 377 FCEESGCRHAAIAKYFGDLPPA--CTKGCDCCQNPAGVRKQLDAL 419
>gi|292612098|ref|XP_694922.4| PREDICTED: ATP-dependent DNA helicase Q5-like [Danio rerio]
Length = 936
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/392 (40%), Positives = 230/392 (58%), Gaps = 16/392 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I DL+S P L+LLY+TPE+ A+P F L + SRGLL +A+DEAHC+S WGHD
Sbjct: 97 RRQILADLESETPRLKLLYITPEMVASPSFQPVLSSLSSRGLLGYLAVDEAHCVSQWGHD 156
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y KL LR+ L + +ALTATA +V++D+ SL L++PLV + R NL Y+V
Sbjct: 157 FRPDYLKLGDLRSRLQGIRCIALTATAPKRVKEDIERSLRLRSPLVFSTPVFRKNLKYDV 216
Query: 124 RYKDLLDDAYADLCSVLKA--NGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
++DLL + Y L + K G+T C IVYC R +C+E++ L+ GI+
Sbjct: 217 IFRDLLPEPYVHLLAFAKEALGGNTAEKGFAGCGIVYCRTRESCEEVAHKLTKLGIAAKP 276
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL RS DW++ + ++VAT++FGMG+D+ +VR V H+N+ KS+ ++YQESG
Sbjct: 277 YHAGLKSGDRSENQADWMADKVPIIVATISFGMGVDKANVRFVVHWNLAKSLASYYQESG 336
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD LPS +YY DR ++ F++ K S+ + + + K I DF MV +CE
Sbjct: 337 RAGRDGLPSSCRIYYSPKDRDQLNFLIRKEISRKQEKRGSEKEQDKAPILDFEAMVAFCE 396
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKN--HFSQ---I 349
GCR I FG + P C +CD C+ P L+ L + + N H ++
Sbjct: 397 QEGCRHATISTFFGNEKPN--CAGACDFCRDPKLVRAQLARAAALSTRTNPTHSAEPRGP 454
Query: 350 FISSQDMTDGGQYSEFWNRDDEASGSEEDISD 381
F ++ GG+ + R DE GSEED S+
Sbjct: 455 FGFDPELYAGGRKGYGFERHDEEYGSEEDDSE 486
>gi|355754382|gb|EHH58347.1| hypothetical protein EGM_08175 [Macaca fascicularis]
Length = 991
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 211/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKDLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + ++ S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGSKA-SDKATILAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 447
>gi|426238466|ref|XP_004013174.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Ovis aries]
Length = 985
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 212/345 (61%), Gaps = 12/345 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 105 VQERKELLSDLEQEKPQTKLLYITPEMAASTSFQPTLNSLVSRHLLSYLVVDEAHCVSQW 164
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L D P +ALTATA P+V++DV +L L+ P+ + K+ R NL
Sbjct: 165 GHDFRPDYLRLGALRSRLADAPCVALTATATPQVREDVFAALHLKQPVAIFKTPCFRANL 224
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDTC-------AIVYCLERTTCDELSAYLSAGGIS 171
FY+V++K+LL D Y +L LKA G I+YC R C++L+ LS G++
Sbjct: 225 FYDVQFKELLPDPYGNLRDFCLKALGQKADKGLSGGGIIYCRTREACEQLAIELSYRGVN 284
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 285 AKAYHAGLKAPERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 344
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY DR ++ F++ K +K + + S K ++ F +V
Sbjct: 345 ESGRAGRDGKPSWCRLYYSRSDRDQVSFLIKKEVAKLQEKRGNKA-SDKAAVLAFDALVA 403
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE SGCR I + FG+ P C CD C++P + K L L
Sbjct: 404 FCEESGCRHAAIAKYFGDLPPA--CTKGCDCCQNPAGVRKQLDAL 446
>gi|380790165|gb|AFE66958.1| ATP-dependent DNA helicase Q5 isoform 1 [Macaca mulatta]
gi|383412321|gb|AFH29374.1| ATP-dependent DNA helicase Q5 isoform 1 [Macaca mulatta]
Length = 991
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 210/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKDLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 447
>gi|355568922|gb|EHH25203.1| hypothetical protein EGK_08985 [Macaca mulatta]
Length = 991
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 210/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKDLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 447
>gi|351707850|gb|EHB10769.1| ATP-dependent DNA helicase Q5 [Heterocephalus glaber]
Length = 989
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 211/342 (61%), Gaps = 12/342 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
MQ + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 106 MQERKELLSDLEQEKPQTKLLYITPEMAASTSFQPILSSLVSRHLLSYLVVDEAHCVSQW 165
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L P +ALTATA +VQ+DV +L L+ P+ K+ R NL
Sbjct: 166 GHDFRPDYLRLGALRSRLAHAPCVALTATATRQVQEDVFAALHLKQPVATFKTPCFRANL 225
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGIS 171
FY+V++K+L+ D Y +L LKA G C IVYC R +C++L+ LS+ G++
Sbjct: 226 FYDVQFKELISDPYGNLRDFCLKALGQKTDKGLSGCGIVYCRTRESCEQLAIELSSRGVN 285
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 286 AKAYHAGLKASDRTQVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 345
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V
Sbjct: 346 ESGRAGRDGKPSWCRLYYSRNDRDQVSFLIKKEVAKLQEKRGNKS-SDKATLLAFDALVT 404
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
+CE GCR I + FG+ P C CD C++P + + L
Sbjct: 405 FCEELGCRHAAIAKYFGDAPPA--CTKGCDHCQNPAAVRRQL 444
>gi|348551294|ref|XP_003461465.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Cavia porcellus]
Length = 989
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/347 (42%), Positives = 209/347 (60%), Gaps = 16/347 (4%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 105 VQEKKELLSDLEREKPQTKLLYITPEMAASTSFQPILSSLVSRHLLSYLVVDEAHCVSQW 164
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNL 119
GHDFRP Y +L +LR+ L P LALTATA P+VQ+DV +L L+ P+ K+ R NL
Sbjct: 165 GHDFRPDYLRLGALRSRLVHAPCLALTATATPQVQEDVFAALHLKQPVATFKTPCFRANL 224
Query: 120 FYEVRYKDLLDDAYA---DLCSVLKANGDT-------CAIVYCLERTTCDELSAYLSAGG 169
FY+V++K+L+ D Y D C KA G C IVYC R C++L+ LS+ G
Sbjct: 225 FYDVQFKELISDPYGNLRDFCR--KALGQKTDKMLSGCGIVYCRTREACEQLAIELSSRG 282
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
++ AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +
Sbjct: 283 VNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGY 342
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD PS LYY DR ++ F++ K +K + + K ++ F +
Sbjct: 343 YQESGRAGRDGKPSWCRLYYSRIDRDQVSFLIRKEVAKLQEKRGNKS-FDKATLLAFDAL 401
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
V +CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 402 VTFCEAQGCRHAAIAKYFGDAPPA--CSKGCDYCQNPAAVQRQLDAL 446
>gi|296203191|ref|XP_002748782.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Callithrix
jacchus]
Length = 963
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKELLADLKQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 140 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDPYGNLKDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 260 KAYHAGLKVSERMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K SI F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKASIMAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 379 CEELGCRHAAISKYFGDAPPA--CAKGCDHCQNPTAVRRQLEAL 420
>gi|109118218|ref|XP_001098200.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Macaca mulatta]
Length = 991
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 210/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ +P ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKDLLADLEREEPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 447
>gi|402901083|ref|XP_003913486.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Papio anubis]
Length = 991
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKDLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRCRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 447
>gi|109118220|ref|XP_001097819.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Macaca mulatta]
Length = 964
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 210/344 (61%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ +P ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKDLLADLEREEPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 140 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 260 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 379 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 420
>gi|402901085|ref|XP_003913487.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Papio anubis]
Length = 964
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + + DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKDLLADLEREKPQTKILYITPEMAASSSFQPSLNSLLSRHLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 140 HDFRPDYLRLGALRCRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 260 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVIHWNIAKSMAGYYQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATILAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 379 CEELGCRHAAIAKYFGDAPPA--CAKGCDHCQNPMAVRRQLEAL 420
>gi|296203193|ref|XP_002748783.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Callithrix
jacchus]
Length = 990
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLKQEKPQTKILYITPEMAASSSFQPTLNSLVSRYLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKQPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKVSERMLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K SI F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKASIMAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAISKYFGDAPPA--CAKGCDHCQNPTAVRRQLEAL 447
>gi|260806927|ref|XP_002598335.1| hypothetical protein BRAFLDRAFT_119181 [Branchiostoma floridae]
gi|229283607|gb|EEN54347.1| hypothetical protein BRAFLDRAFT_119181 [Branchiostoma floridae]
Length = 425
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/307 (46%), Positives = 197/307 (64%), Gaps = 16/307 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S KP +LLY+TPEL ATPGF L+ + SR LL +A+DEAHC+S WGHD
Sbjct: 105 RKRVLADLRSSKPKTKLLYITPELAATPGFQQLLETLKSRKLLAHLAVDEAHCVSQWGHD 164
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL SLR L DVP +ALTATA VQKD++ SL LQ P+ K+S RPNLFY+
Sbjct: 165 FRPDYLKLGSLREKLEDVPCIALTATATSAVQKDIINSLHLQEPVQKFKTSVFRPNLFYD 224
Query: 123 VRYKDLLDDAYADLCS-VLKANGDT-----------CAIVYCLERTTCDELSAYLSAGGI 170
V+YK++LDD Y DL +KA G+ C IVYC R C E++A L+ G+
Sbjct: 225 VKYKEVLDDPYEDLKDFAVKALGEEGVEPVKGPHKGCGIVYCRTRDGCTEVAARLTKKGL 284
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
AYHAGL D R V DW+ + V+VAT++FGMG+D+ VR V H+NIPKSM +Y
Sbjct: 285 LSKAYHAGLKDSTREEVQMDWMEGKVPVIVATISFGMGVDKATVRFVAHWNIPKSMAGYY 344
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTR---ERSSKKSISDFS 287
QESGRAGRD + LYY +R ++ F++ ++ S+ +++ + ++K +++ F
Sbjct: 345 QESGRAGRDGKQAFCRLYYSRHERDQVCFLIKQDISRPNKANGPKGVLGPNAKSAMASFE 404
Query: 288 QMVDYCE 294
+V YCE
Sbjct: 405 TLVKYCE 411
>gi|431908771|gb|ELK12363.1| ATP-dependent DNA helicase Q5 [Pteropus alecto]
Length = 991
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 216/359 (60%), Gaps = 16/359 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A F L + SR LL+ + +DEAHC+S WG
Sbjct: 106 QEKKELLSDLEQEKPRTKLLYITPEMAAAASFQPTLNSLVSRRLLSYLVVDEAHCVSQWG 165
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 166 HDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVAAFKTPCFRANLF 225
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+LL D + +L +KA G C IVYC R C++L+ LS G++
Sbjct: 226 YDVQFKELLFDPFGNLRDFCIKALGQKADKRLSGCGIVYCRTREACEQLAIELSYRGVNA 285
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 286 KAYHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 345
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K + F +V +
Sbjct: 346 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKSAFLAFDALVTF 404
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
CE GCR I + FG+ P C CD C++P + K L A+ Q++ +S+ I
Sbjct: 405 CEELGCRHAAIAKYFGDAPPT--CTRGCDHCQNPAAVQKQL----DALEQRSSWSKTCI 457
>gi|327265015|ref|XP_003217304.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Anolis carolinensis]
Length = 1026
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 225/402 (55%), Gaps = 26/402 (6%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + I DL S P +LLY+TPE+ ++ F L+ + SR LL+ + +DEAHC+S W
Sbjct: 102 VQERKAIITDLMSDTPKTKLLYITPEMASSSSFQPTLEVLVSRSLLSYLIVDEAHCVSQW 161
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNL 119
GHDFRP Y +L SLR +P+ P +ALTATA +VQ D++ SL L+ P+ K+ R NL
Sbjct: 162 GHDFRPDYLRLGSLRCRIPNTPCIALTATATKRVQDDIIASLKLKLPVTTFKTPCFRSNL 221
Query: 120 FYEVRYKDLLDDAY---ADLCSVLKANGDT------CAIVYCLERTTCDELSAYLSAGGI 170
FY+V+YK+LL D Y D C D C I+YC R C++++ L+ G+
Sbjct: 222 FYDVQYKELLTDPYENLKDFCLNSLGKHDISGAYSGCGIIYCRMREVCEQVAIELNYRGL 281
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
AYHAGL R+SV +W+ + Q++VAT++FGMG+D+ +VR V H+NIPKSM +Y
Sbjct: 282 RAKAYHAGLKAAERTSVQSEWMEEKVQIIVATISFGMGVDKANVRFVAHWNIPKSMAGYY 341
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD PS LYY DR ++ F++ K +K + T + S K ++DF +V
Sbjct: 342 QESGRAGRDGKPSSCRLYYSRADRDQVSFLIKKEIAKLQEKRGTLKESDKAMMTDFDAVV 401
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIF 350
+ E CR I FG+ IP C CD C++ + K + L + +S+
Sbjct: 402 AFSEELSCRHAAIANFFGDAIPE--CNKCCDYCRNSAAVKKKVEALQQGT---SAWSRTC 456
Query: 351 ISSQ---------DMTDGGQ--YSEFWNRDDEASGSEEDISD 381
I D+ +GG+ Y F D++ G E D
Sbjct: 457 IGPSASSWNSYDPDLYEGGKRGYRSFIRYDEDGGGVSEAHED 498
>gi|198433869|ref|XP_002126337.1| PREDICTED: similar to RecQ protein-like 5 [Ciona intestinalis]
Length = 1114
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 205/336 (61%), Gaps = 15/336 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S S RLLY+TPE TAT FM + K+H+R ++++ IDEAHC+S WGHD
Sbjct: 106 RNEVLADLFSPDSSCRLLYITPEQTATAAFMELVMKLHARSKISMLIIDEAHCVSQWGHD 165
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKSSFNRPNLFYE 122
FRP Y KL SLR L +V +ALTATA +VQKD+ L L + + + RPNL+Y+
Sbjct: 166 FRPDYMKLGSLRQKLVNVQCIALTATATAEVQKDIFNLLHLPTSTAIFNTGVFRPNLYYD 225
Query: 123 VRYKDLLDDAYADL---------CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCA 173
V+ K+L+ D Y DL S+ K+ + IVYC +R C +SA L G+
Sbjct: 226 VKVKELVGDCYLDLQKFCQKALKISIAKSKPEGAGIVYCHKREDCMTISAELLKRGLLAK 285
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGL++K R SV DW S + ++VATV+FGMG+D+ +VR V H+ IPKSM +YQES
Sbjct: 286 PYHAGLSNKERESVQTDWTSGKVPIIVATVSFGMGVDKSNVRFVAHWTIPKSMAGYYQES 345
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKN---QSKNSQSFSTRERSSKKSISDFSQMV 290
GRAGRD S LYY DR + F++ K+ + S+S + ++ + +FS +V
Sbjct: 346 GRAGRDGEQSLCRLYYSRTDRNNINFLIRKDFDRKRAKSKSETQFKKHVQAITENFSSLV 405
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHP 326
+YCEGS CR I F + +P C + CD+CK+P
Sbjct: 406 NYCEGSKCRHAAIAAFFNDAMPD--CNDQCDSCKNP 439
>gi|395825934|ref|XP_003786175.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Otolemur
garnettii]
Length = 960
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP RLLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 80 QERKELLSDLEREKPQTRLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 139
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 140 HDFRPDYLRLGTLRSRLGRTPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 199
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 200 YDVQFKELISDLYGNLRDFCLKALGQKTDKGLSGCGIVYCRTREACEQLAVELSCRGVNA 259
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM + QE
Sbjct: 260 KAYHAGLKASERTLVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYCQE 319
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V +
Sbjct: 320 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATLLAFDALVTF 378
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 379 CEELGCRHAAIAKYFGDAPPT--CVKGCDHCQNPLAVRRQLDAL 420
>gi|395825932|ref|XP_003786174.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Otolemur
garnettii]
Length = 987
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 145/344 (42%), Positives = 209/344 (60%), Gaps = 12/344 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP RLLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLSDLEREKPQTRLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NLF
Sbjct: 167 HDFRPDYLRLGTLRSRLGRTPCVALTATATPQVQEDVFAALHLKQPVATFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDLYGNLRDFCLKALGQKTDKGLSGCGIVYCRTREACEQLAVELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM + QE
Sbjct: 287 KAYHAGLKASERTLVQNEWMEEKIPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYCQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATLLAFDALVTF 405
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CE GCR I + FG+ P C CD C++P + + L L
Sbjct: 406 CEELGCRHAAIAKYFGDAPPT--CVKGCDHCQNPLAVRRQLDAL 447
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 198/322 (61%), Gaps = 11/322 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTAT-PGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K++ DL S P RLLYVTPE A+ FM L ++ +G + IDEAHC+S WGHDF
Sbjct: 90 KVFRDLRSNSPKTRLLYVTPERVASNETFMDILGDLYQKGKFMRIVIDEAHCVSQWGHDF 149
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y++LS LR P VPILALTATA KV+ D++ +L ++ P+ K SFNRPNL+Y V
Sbjct: 150 RPDYKELSILRKNFPSVPILALTATATEKVRNDIILNLNMKKPVCFKQSFNRPNLYYHVM 209
Query: 125 YKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDK 182
K D + +K D I+YCL + C+++S L+ GI A YHAG+
Sbjct: 210 KKP--KDVSKQMAEFIKKQYPDKSGIIYCLSKYDCEKISGDLNTEYGIKSAYYHAGMEIH 267
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
+R+ V D W R +V+VAT+AFGMGI++ DVR V H +IPKS+E +YQESGRAGRD L
Sbjct: 268 SRNQVQDRWQKGRIKVIVATIAFGMGINKPDVRFVFHHSIPKSLEGYYQESGRAGRDGLK 327
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S +LYY D+ R+E ++ + +N ++ +E S ++ ++MV YCE + CRR
Sbjct: 328 SHCILYYKWADKLRIETLIMLSSKENGTHYNLKE-----SKTNLNKMVSYCENDTDCRRS 382
Query: 302 KILESFGEQIPVSLCKNSCDAC 323
L FGE+ S C +CD C
Sbjct: 383 LQLSYFGEKFDKSKCGKTCDNC 404
>gi|167540323|ref|XP_001741831.1| ATP-dependent DNA helicase recQ [Entamoeba dispar SAW760]
gi|165893416|gb|EDR21673.1| ATP-dependent DNA helicase recQ, putative [Entamoeba dispar SAW760]
Length = 508
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 202/343 (58%), Gaps = 22/343 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ L+S P L LLYVTPE T F + +KK++S L + A+DEAHCIS WGHDF
Sbjct: 116 TKVLSLLNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSIKKLGMFAVDEAHCISQWGHDF 175
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RPSY +LS L+ PD+PI+ALTATA PKV++D+++SL L+NP + SSF+RPN++++V
Sbjct: 176 RPSYLELSYLKKTYPDIPIIALTATATPKVKEDIIKSLELKNPKIFTSSFDRPNIYFKVI 235
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
YKDL + L +L + I+YC R C+ + Y+S G A YHAG+ + R
Sbjct: 236 YKDLYETPIQILTQILHQHEKEGGIIYCSTRMECELIEKYISTNGYPVAKYHAGMKSEER 295
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ W + VVVAT+AFGMGIDR DVR V H+NIPK++E F QE+GRAGRD P++
Sbjct: 296 ETIQKKWENGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEAGRAGRDGKPAE 355
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
S++ + DD R E L++ S+ + + C CRRK +L
Sbjct: 356 SIILFSNDDFER-EVALNQETSE--------------------VIRELCVECSCRRKCLL 394
Query: 305 ESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFS 347
+ FGE K CD C + L +L +++KN +
Sbjct: 395 KYFGE-TSFKPNKRCCDLCNENTRVKDDLEKLRIRLIKKNTIT 436
>gi|67475629|ref|XP_653505.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|56470462|gb|EAL48119.1| recQ family DNA helicase [Entamoeba histolytica HM-1:IMSS]
gi|449702365|gb|EMD43019.1| ATP-dependent DNA helicase recQ, putative [Entamoeba histolytica
KU27]
Length = 509
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 208/363 (57%), Gaps = 26/363 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ L+S P L LLYVTPE T F + +KK++S L + A+DEAHCIS WGHDF
Sbjct: 116 TKVLSILNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSIKKLGMFAVDEAHCISQWGHDF 175
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RPSY +LS L+ PD+PI+ALTATA KV++D+++SL L+NP + SSF+RPN++++V
Sbjct: 176 RPSYLELSYLKKTYPDIPIIALTATATSKVKEDIIKSLELKNPQIFTSSFDRPNIYFKVI 235
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
YKDL + L +L + I+YC R C+ + Y+S G A YHAG+ + R
Sbjct: 236 YKDLYETPIQILTQILHQHEKEGGIIYCSTRMECELIEKYISTNGYPVAKYHAGMKSEER 295
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ W S VVVAT+AFGMGIDR DVR V H+NIPK++E F QE+GRAGRD P++
Sbjct: 296 ETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEAGRAGRDGKPAE 355
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
S++ + DD R E L++ S+ + + C CRRK +L
Sbjct: 356 SIILFSNDDFER-EVALNQETSE--------------------IIRELCVECSCRRKCLL 394
Query: 305 ESFGEQI--PVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQY 362
+ FGE P C CD C + L +L +++KN + + +G Q
Sbjct: 395 KYFGETTFKPNKRC---CDLCNENTRVKDDLEKLRMRLIKKNTIRVKHPTPKRSPNGSQC 451
Query: 363 SEF 365
S F
Sbjct: 452 SGF 454
>gi|407040860|gb|EKE40365.1| recQ family DNA helicase [Entamoeba nuttalli P19]
Length = 508
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 208/363 (57%), Gaps = 26/363 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ L+S P L LLYVTPE T F + +KK++S L + A+DEAHCIS WGHDF
Sbjct: 116 TKVLSILNSSNPELYLLYVTPEQIKTQRFQNIMKKLYSVKKLGMFAVDEAHCISQWGHDF 175
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RPSY +LS L+ PD+PI+ALTATA KV++D+++SL L+NP + SSF+RPN++++V
Sbjct: 176 RPSYLELSYLKKTYPDIPIIALTATATSKVKEDIIKSLELKNPQIFTSSFDRPNIYFKVI 235
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
YKDL + L +L + I+YC R C+ + Y+S G A YHAG+ + R
Sbjct: 236 YKDLYETPIQILTQILHQHEKEGGIIYCSTRMECELIEKYISTNGYPVAKYHAGMKSEER 295
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ W S VVVAT+AFGMGIDR DVR V H+NIPK++E F QE+GRAGRD P++
Sbjct: 296 ETIQKKWESGEVNVVVATIAFGMGIDRGDVRFVIHWNIPKTIEGFMQEAGRAGRDGKPAE 355
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
S++ + DD R E L++ S+ + + C CRRK +L
Sbjct: 356 SIILFSNDDFER-EVALNQETSE--------------------IIRELCVECSCRRKCLL 394
Query: 305 ESFGEQI--PVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQY 362
+ FGE P C CD C + L +L +++KN + + +G Q
Sbjct: 395 KYFGETTFKPNKRC---CDLCNENTRVKDDLEKLRMRLIKKNTIRVKHPTPKRSPNGSQC 451
Query: 363 SEF 365
S F
Sbjct: 452 SGF 454
>gi|157786722|ref|NP_001099323.1| ATP-dependent DNA helicase Q5 [Rattus norvegicus]
gi|149054808|gb|EDM06625.1| RecQ protein-like 5 (predicted) [Rattus norvegicus]
Length = 973
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 213/346 (61%), Gaps = 13/346 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 106 VQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLSRNLLSYLVVDEAHCVSQW 165
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNL 119
GHDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ K+ R NL
Sbjct: 166 GHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAALHLKQPVASFKTPCFRANL 225
Query: 120 FYEVRYKDLLDDAYADLCSV-LKA------NGDT--CAIVYCLERTTCDELSAYLSAGGI 170
FY+V++K+L+ D Y +L LKA NG + C IVYC R C++L+ LS+ G+
Sbjct: 226 FYDVQFKELIPDVYGNLRDFCLKALGQKADNGSSSGCGIVYCRTREACEQLAIELSSRGV 285
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
+ AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +Y
Sbjct: 286 NAKAYHAGLKASERTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYY 345
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD PS LYY +DR ++ F++ K +K + + S K ++ F +V
Sbjct: 346 QESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKLQEKRGNKP-SDKATLLAFDALV 404
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+CE GCR I + FG+ P C CD C+ P + K L L
Sbjct: 405 TFCEEVGCRHAAIAKYFGDAPPA--CAKGCDCCQSPAAIRKKLDAL 448
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 201/321 (62%), Gaps = 11/321 (3%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y+D+ S P +RLLY+TPE + + + L + +GL + + IDEAHC+S WGHDFR
Sbjct: 608 VYKDIRSNSPKIRLLYLTPERVVKSDSLIEILANLDQKGLFSRIVIDEAHCVSQWGHDFR 667
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++LS LR P VPILALTATA +V+ DV+ +L ++NP+ K SFNRPNL Y+V
Sbjct: 668 PDYKELSILRRKFPKVPILALTATATERVRNDVIYNLSMRNPVCFKQSFNRPNLIYQVLK 727
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ K ++DD + S D IVYC+ + C+ ++ L IS A YHAGL +
Sbjct: 728 KTKQVVDDMSKFIHSTYP---DKSGIVYCISKYDCENVAKRLRELKISAAHYHAGLENDE 784
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ V +W R +V+VAT+AFGMGI++ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 785 RAKVQANWQKGRIKVIVATIAFGMGINKADVRFVIHHSVPKSLEGYYQESGRAGRDGGIS 844
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKK 302
LLY+ D+ R + ++ +N + Q S R ++ S+ ++MV+YCE + CRR+
Sbjct: 845 HCLLYFSWADKLRNDLLI-QNSFTSGQGSSHNTRETRDSL---NKMVNYCENETDCRRQL 900
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
L FGE S CK +CD C
Sbjct: 901 QLAYFGENFEKSGCKKTCDNC 921
>gi|298251484|ref|ZP_06975287.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
gi|297546076|gb|EFH79944.1| ATP-dependent DNA helicase RecQ [Ktedonobacter racemifer DSM 44963]
Length = 739
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 137/312 (43%), Positives = 187/312 (59%), Gaps = 12/312 (3%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+L+YV PE T F++ L ++ R L L+A+DEAHC+S WGHDFRP YR+L LR
Sbjct: 107 LKLVYVAPERLLTQTFLTFLDEVQERVGLGLIAVDEAHCVSEWGHDFRPEYRQLGRLRVR 166
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA +VQ+D++ L L +P V +S+NRPNL+YEVR K + Y++L
Sbjct: 167 YPQVPAMALTATATERVQEDILTQLKLNDPYVEVASYNRPNLYYEVRQKH--QNTYSELV 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ D I+YC R D ++ L GI YHAGL+ R+ D +I
Sbjct: 225 QFLREQSDAPVIIYCQSRKNVDTIADSLQHHGIRALPYHAGLSTDERTRNQDSFIHDDVP 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI + DVR V H+++PKS+E +YQESGRAGRD L ++ +L+Y DR +
Sbjct: 285 VLVATIAFGMGIAKPDVRAVIHYDMPKSLEGYYQESGRAGRDGLEARCILFYQHGDRMKY 344
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
EFIL++ + E K+ Q++ Y E +GCRRK +L FGE C
Sbjct: 345 EFILAQKED---------EHELLKARQQIQQVITYSESTGCRRKALLAYFGENFTEENCG 395
Query: 318 NSCDACKHPNLL 329
N CD C P L
Sbjct: 396 N-CDNCLRPVTL 406
>gi|440799208|gb|ELR20268.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 608
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 197/321 (61%), Gaps = 19/321 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I D+ S +P +LLYVTPEL T GF++ L + + L + +DEAH IS WGHDFR
Sbjct: 82 IQRDITSKQPKTKLLYVTPELIDTQGFLNTLYSLRNNNKLAMFVVDEAHAISEWGHDFRF 141
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
+YRKLS + PI +VQ DV+ SL L PL++ SFNRPN++YEVR+K
Sbjct: 142 AYRKLSVFKERFNSTPIT--------RVQTDVVNSLRLDKPLIITLSFNRPNIYYEVRFK 193
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
DLL + + D+ S + C I+YC +R TC +++ L G++ AYHAGL D R++
Sbjct: 194 DLLGNVHNDIASFISNRAGACGIIYCHKRETCGHVASKLKERGVNAEAYHAGLRDADRTA 253
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
V W++ ++VAT+AFGMGID+ DVR V HF++PK++E FYQ G++ S SL
Sbjct: 254 VQTKWMTGEVDIIVATIAFGMGIDKPDVRFVIHFDVPKNLEGFYQAHGKS------SVSL 307
Query: 247 LYYGMDDRRRMEFILSK--NQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGS-GCRRKK 302
LYY DD+ F+L++ + + Q T + + +I++ + +MV+YCEG GC+RK+
Sbjct: 308 LYYSKDDKSLNSFLLAQAAQKQRERQGQQTGPQPRQNAINNSWEKMVEYCEGKPGCKRKR 367
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
+LE FGE +C N CD C
Sbjct: 368 LLEYFGENTTRLVCGN-CDYC 387
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 10/320 (3%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y DL S +P LRLLYVTPE + G + L ++H+ G L+ IDEAHC+S WGHDFR
Sbjct: 109 VYSDLRSTQPRLRLLYVTPEKVSASGRLLDALSRLHANGRLSRFVIDEAHCVSQWGHDFR 168
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KLS LR VP++ALTATA P+V+ D++ L +++P SFNRPNL YE+R
Sbjct: 169 PDYKKLSVLREKFSGVPMMALTATATPRVRTDILHQLGMRDPKWFLQSFNRPNLRYEIRL 228
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K ++ V++ I+YC R CD+L+ LS G+ AYHAGL+D R
Sbjct: 229 KSGKVGTAREVLEVVEGKFARQSGIIYCFSRKECDDLAEELSKNGVPAVAYHAGLDDPKR 288
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++V WI + +VV AT+AFGMG+D+ DVR V H+ +PKSME FYQESGRAGRD P+
Sbjct: 289 NAVQQRWIDDKVRVVCATIAFGMGVDKPDVRFVVHYTLPKSMEGFYQESGRAGRDGRPAS 348
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D +R+ ++ +++ N + T +S+ MV++CE + CRR ++
Sbjct: 349 CLLFYSFADVQRIRRMVEMDKASNYAAKQTH-------LSNLWHMVNFCENRTDCRRAQV 401
Query: 304 LESFGEQIPVSLCKNSCDAC 323
+F + +CD C
Sbjct: 402 SRNFDRTFCERNRRFACDNC 421
>gi|158338684|ref|YP_001519861.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
gi|158308925|gb|ABW30542.1| ATP-dependent DNA helicase RecQ [Acaryochloris marina MBIC11017]
Length = 736
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 198/318 (62%), Gaps = 8/318 (2%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
++ SGK ++LLYV PE F++ L ++ ++ L A+DEAHC+S WGHDFRP YR
Sbjct: 112 EIYSGK--IKLLYVAPERLLNESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEYR 169
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+L+ +R VP+ ALTATA +V++D+++ L L+ P V +SFNRPNL+YEVR K
Sbjct: 170 RLAEVRQRYTQVPVYALTATATERVRQDIIQQLQLRQPFVHVASFNRPNLYYEVRPKS-- 227
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
YADL ++ +G IVYCL R +E+SA L A GIS YHAG++D AR+ +
Sbjct: 228 RQVYADLYREIRQHGQDSGIVYCLSRREVNEISARLQADGISALPYHAGMSDSARTLNQE 287
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I QV+VATVAFGMGID+ DVR V H+N+P+++E +YQESGRAGRD PSK LL++
Sbjct: 288 RFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRNIEGYYQESGRAGRDGEPSKCLLFF 347
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D +E+++ + + ++ + E + + Q++DY E + CRR L FGE
Sbjct: 348 STKDIHTIEWLIERK--ADPETGNPLENEQRIARQQLRQVIDYAESTVCRRTVQLGYFGE 405
Query: 310 QIPVSLCKNSCDACKHPN 327
C CD C HP
Sbjct: 406 TF-AGDC-GGCDNCCHPK 421
>gi|213982753|ref|NP_001135548.1| RecQ protein-like 5 [Xenopus (Silurana) tropicalis]
gi|195539645|gb|AAI68026.1| Unknown (protein for MGC:185094) [Xenopus (Silurana) tropicalis]
Length = 1050
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 210/343 (61%), Gaps = 12/343 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ KI +DL+S P ++LLY+TPE+ A+ F L ++ SR LL+ + IDEAHC+S WGHD
Sbjct: 110 RKKIIQDLESEAPQIKLLYITPEMAASASFQPILAQLLSRSLLSYLIIDEAHCVSEWGHD 169
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L SLR+ +P P +ALTATA +VQ D++ SL L+ P+ + K+ R NLFY+
Sbjct: 170 FRPDYLRLGSLRSRIPHTPCVALTATATKQVQDDIIASLKLRQPVSMFKTPCFRSNLFYD 229
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGISCA 173
V+ KDL+ D Y DL LKA G C IVYC R C+E++ LS G+
Sbjct: 230 VQLKDLVGDPYGDLKEFCLKALGTKTPQGGFPGCGIVYCRTRDACEEVAVQLSQRGVLSK 289
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGL R ++ +DW+ V+VAT++FGMG+D+ +VR V H+NI KS+ +YQES
Sbjct: 290 PYHAGLKAGDRVTIQNDWMDGTVPVIVATISFGMGVDKANVRFVAHWNIAKSLAGYYQES 349
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD + LYY DR ++ F++ K ++ + S K ++ F MV +C
Sbjct: 350 GRAGRDGKQAFCRLYYSRTDRDQVGFLIRKEIAQAQAKRGDNKASDKAGMAGFDAMVSFC 409
Query: 294 EGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
E +GCR I FG++ P C SCD+CK+P + + + +L
Sbjct: 410 EDTGCRHAAIAAYFGDEKP--QCNKSCDSCKNPLAVKRQVEQL 450
>gi|300868275|ref|ZP_07112904.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
gi|300333710|emb|CBN58088.1| ATP-dependent DNA helicase [Oscillatoria sp. PCC 6506]
Length = 726
Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 200/318 (62%), Gaps = 14/318 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F+ L ++ + ++ AIDEAHC+S WGHDFRP YR++ +R+
Sbjct: 118 IKLLYVAPERLLSERFLPFLDQVAASLGISAFAIDEAHCVSEWGHDFRPDYRQILQVRDR 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P +PI+ALTATA +V+ D+M+ L L+ P + +SFNRPNL+YEVR K ++A+L
Sbjct: 178 YPHIPIMALTATATDRVRLDIMQQLALREPYIHVASFNRPNLYYEVRAKT--KHSFAELL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++ NG + I+YCL R DEL+ L GIS YHAGLND R+S +I Q
Sbjct: 236 QIIDKNGGS-GIIYCLSRKNVDELAYKLQQVGISALPYHAGLNDSDRTSNQTRFIRDDVQ 294
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGI++ DVR V H+N+P+++E +YQESGRAGRD P++ +L+ G DR+ +
Sbjct: 295 IMVATVAFGMGINKPDVRFVVHYNLPRNLEGYYQESGRAGRDGEPAQCILFLGYGDRKTI 354
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+++ + Q +T++ F +++DY E S CRR L FGE P + C
Sbjct: 355 EYLIEQKPDPQEQRIATQQ---------FRRVIDYAEASDCRRTIQLSYFGEAFPGN-C- 403
Query: 318 NSCDACKHPNLLAKYLGE 335
+ CD C++ L + E
Sbjct: 404 SQCDNCRNQKPLEDWTIE 421
>gi|443725010|gb|ELU12752.1| hypothetical protein CAPTEDRAFT_102278, partial [Capitella teleta]
Length = 622
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 192/333 (57%), Gaps = 18/333 (5%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
DL+ +P +LLY+TPE AT GF+S + + + L+ +DEAHC+S WGHDFRP Y
Sbjct: 108 DLNRERPHTKLLYITPEQAATSGFISITEMLMKKKLVEFFVVDEAHCVSQWGHDFRPDYL 167
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYEVRYKDL 128
KL + R L VP +ALTATA P V D+ SL L+ P+ K++ RPNLFY+V +KDL
Sbjct: 168 KLGTYRKKLLGVPCIALTATATPHVVGDIKNSLKLKAPVASFKATCFRPNLFYDVVFKDL 227
Query: 129 LDDAYADLCSV--------LKA-------NGDTCAIVYCLERTTCDELSAYLSAGGISCA 173
L+D Y DL LKA N C IVYC R +C E+++ L++ G+
Sbjct: 228 LNDPYEDLRRFSLKSLDVDLKADLKEVDWNTKGCGIVYCRTRESCGEVASRLTSKGVPAK 287
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGLN R+ DW+ R V+ AT++FGMG+D+ +VR V H+ +PKSM +YQES
Sbjct: 288 PYHAGLNASLRTETQTDWMEGRVAVIAATISFGMGVDKANVRFVAHWTLPKSMAGYYQES 347
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD S LYY DDR + F+L K + S+ ++ E +K ++ F +V
Sbjct: 348 GRAGRDGRRSFCRLYYTKDDRNTVAFLLRKENIRPSKEGASAEARTKAALQSFECLVTMV 407
Query: 294 EGSGCRRKKILESFGEQIPVSLCKNSCDACKHP 326
E CR I F + P C SCD C +P
Sbjct: 408 ETPQCRHAAIARYFCDDPP--FCSKSCDFCSNP 438
>gi|375149593|ref|YP_005012034.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
gi|361063639|gb|AEW02631.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
Length = 763
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 198/325 (60%), Gaps = 24/325 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPG--FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++++DL SG+ ++LYV PE LT F S LK L+ A+DEAHCIS WGH
Sbjct: 134 EVHDDLLSGRT--KMLYVAPETLTKQENLEFFSDLK-------LSFFAVDEAHCISEWGH 184
Query: 63 DFRPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR+L + + PD+P++ALTATA PKVQ D++++L L++P + SSFNRPNL+Y
Sbjct: 185 DFRPEYRRLREMMTQINPDIPVIALTATATPKVQSDIIKNLALKDPEIYISSFNRPNLYY 244
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
E++ K D ++ + + I+Y L R T +EL+ L A GI AYHAGL+
Sbjct: 245 EIQPKIKKDQTIKNIVRFIVSMKGKSGIIYTLNRKTTEELADMLMANGIKAVAYHAGLDS 304
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ D +++ QV+VAT+AFGMGID+ D+R V HFNIPKS+E +YQE+GRAGRD L
Sbjct: 305 KLRAERQDLFLNEDVQVIVATIAFGMGIDKPDIRFVIHFNIPKSIENYYQETGRAGRDGL 364
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
K +LYY D ++E ++ + S RE ++ S+ V Y E CRRK
Sbjct: 365 EGKCILYYSHKDVSKLEHLM------RDKPLSEREVGAQL----ISETVAYSESGVCRRK 414
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
++ FGE+ C CD C HP
Sbjct: 415 ILMSYFGEEYSEPNC-GQCDNCLHP 438
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/309 (43%), Positives = 196/309 (63%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++LYV PE S LKK G +++ A+DEAHCIS WGHDFRP YR+L+ L+
Sbjct: 104 IKILYVAPERLIMSDTFSYLKK----GKVSMFAVDEAHCISEWGHDFRPEYRRLNILKKR 159
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+VPI+ALTATA+PKV+KD+++ L L++ ++SFNR NLFY V+ K D Y L
Sbjct: 160 FRNVPIVALTATASPKVEKDIVKQLSLEDCRTYRASFNRKNLFYHVKTKK---DTYRQLK 216
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ LK + I+YC R+ + LS L+ G AYHAGL+D R + +I
Sbjct: 217 AYLKKHRGESGIIYCQSRSMVETLSKRLNKDGFKTLAYHAGLSDFKREYNQNSFIQDNTD 276
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGID+ DVR V H+++PK++E++YQE+GR GRD LP + +L++ D+ ++
Sbjct: 277 IIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQETGRGGRDGLPCECVLFFSYADKYKI 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ + + ++K ER + ++ QM++YCE + CRRK +LE FGE P S CK
Sbjct: 337 EYFIEQKKTK-------EERDA--ALMQLRQMINYCESNQCRRKVLLEYFGETYPESNCK 387
Query: 318 NSCDACKHP 326
CD C +P
Sbjct: 388 -KCDVCLNP 395
>gi|427707114|ref|YP_007049491.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
gi|427359619|gb|AFY42341.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7107]
Length = 718
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 207/325 (63%), Gaps = 17/325 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QV+++ E + +GK +RLLYV PE + F+ L +H + ++ AIDEAHC+S WG
Sbjct: 97 QVRSR-EEAILNGK--VRLLYVAPERLMSERFLPFLDLVHHQVGISTFAIDEAHCVSEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L SLR+ P VP++ALTATA +V+ D+++ + L+ P + +SFNR NL+Y
Sbjct: 154 HDFRPEYRQLRSLRSRYPHVPMIALTATATERVRSDIIQQIGLKQPSIHIASFNRQNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K AYA+L +++ D AI+YCL R DEL+ L +S AYHAGL+D
Sbjct: 214 EVRPKT--KYAYAELLELIR-EIDGSAIIYCLTRKKVDELTFKLQNDKVSVLAYHAGLSD 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ RS +I +V+VAT+AFGMGI++ DVRLV HF+IP+++E++YQESGRAGRD
Sbjct: 271 EERSKNQTRFIRDDARVMVATIAFGMGINKPDVRLVIHFDIPRNLESYYQESGRAGRDGE 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+ +++ D + +E+ +++ Q + ++ QM+DY EG+ CRR
Sbjct: 331 PSRCTIFFSFGDIKTIEWSINQKTDAQEQLIAKQQ---------LRQMIDYAEGTDCRRT 381
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
L FGE+ + C N CD C+HP
Sbjct: 382 IQLSYFGERF-LGNCAN-CDNCRHP 404
>gi|425461242|ref|ZP_18840722.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
gi|389825935|emb|CCI23927.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9808]
Length = 701
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEVR K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDASIHIASFNRPNLYYEVRAKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ +L GI+ YHAG+ND+ RS +I Q
Sbjct: 228 QYIKGKKGS-GIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 193/312 (61%), Gaps = 17/312 (5%)
Query: 19 RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+L+YVTPE + A+ ++ +++RGLL+ IDEAHC+S WGHDFRP Y++LS LR +
Sbjct: 814 KLIYVTPERIAASHRLKQTMQNLYTRGLLSRFVIDEAHCVSQWGHDFRPDYKRLSCLREW 873
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR----YKDLLDDAY 133
P VP++ALTATA +V++D++ +L + N LV + SFNRPNLFYEVR YK +++
Sbjct: 874 FPTVPMMALTATATKRVKRDILMNLKMTNALVFEQSFNRPNLFYEVRKKSSYKKCVEEIG 933
Query: 134 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
++ + + + C IVYCL R C+ +S L+ G YHAG++ R + D W S
Sbjct: 934 KEIRTRFR---NKCGIVYCLSRKECETVSQALNQSGHKSLFYHAGMDPADREAYQDQWQS 990
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ ++ AT+AFGMGID+ DVR V HF++PKSME +YQE+GRAGRD P+ +LYY D
Sbjct: 991 GKVNIMCATIAFGMGIDKPDVRFVFHFSLPKSMEGYYQEAGRAGRDGKPAVCVLYYNYGD 1050
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
+ + ++ + Q R S+ +Q+V YCE CRR + L FGE
Sbjct: 1051 KAKHMRLIDIGEGSYEQKEQHR--------SNLNQVVQYCENFQDCRRVQQLAYFGEDFD 1102
Query: 313 VSLCKNSCDACK 324
C+N+CD CK
Sbjct: 1103 KRDCRNNCDVCK 1114
>gi|443668675|ref|ZP_21134223.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
gi|159029588|emb|CAO90247.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443330750|gb|ELS45444.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa DIANCHI905]
Length = 701
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEVR K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDASIHIASFNRPNLYYEVRAKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ +L GI+ YHAG+ND+ RS +I Q
Sbjct: 228 QYIKGKKGS-GIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|359458485|ref|ZP_09247048.1| ATP-dependent DNA helicase RecQ [Acaryochloris sp. CCMEE 5410]
Length = 739
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 196/318 (61%), Gaps = 8/318 (2%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
++ SGK ++LLYV PE F++ L ++ ++ L A+DEAHC+S WGHDFRP YR
Sbjct: 112 EIYSGK--IKLLYVAPERLLHESFLNLLDQVQAQVGLAAFAVDEAHCVSEWGHDFRPEYR 169
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+L+ +R VP+ LTATA +V++D+++ L L+ P V +SFNRPNL+YEVR K
Sbjct: 170 RLAEVRQRYAQVPVYTLTATATERVRQDIIQQLQLRQPFVHVASFNRPNLYYEVRPKS-- 227
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
AYADL ++ +G IVYCL R +E+SA L GI YHAG++D AR+ +
Sbjct: 228 RQAYADLYREIRQHGQDSGIVYCLSRREVNEISARLQGDGIRALPYHAGMSDSARTLNQE 287
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I QV+VATVAFGMGID+ DVR V H+N+P+++E +YQE+GRAGRD PSK LL++
Sbjct: 288 RFIRDDVQVMVATVAFGMGIDKPDVRFVIHYNLPRNIEGYYQEAGRAGRDGEPSKCLLFF 347
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D +E+++ + + ++ + E + + Q++DY E + CRR L FGE
Sbjct: 348 STKDIHTLEWLIERK--VDPETGNPLENEQRIARQQLRQVIDYAESTVCRRTVQLGYFGE 405
Query: 310 QIPVSLCKNSCDACKHPN 327
C CD C HP
Sbjct: 406 TFGGD-C-GGCDNCCHPK 421
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 196/326 (60%), Gaps = 15/326 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY ++ P L+LLYVTPE L+A+ + L ++ RGLL IDEAHC+S WGHDFR
Sbjct: 566 IYREMSKKDPVLKLLYVTPEKLSASQKLCNALTALYERGLLGRFVIDEAHCVSQWGHDFR 625
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P+VP +ALTATA P+V+ D++ L +Q+P SSFNRPNL Y V
Sbjct: 626 PDYKKLQVLRVKYPNVPTMALTATATPRVRTDILHQLGMQSPKWFMSSFNRPNLRYSVIS 685
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +A ++ ++KA D C IVYCL R CD + + GI YHAGL+DK R
Sbjct: 686 KKG-KNASDEVIGLIKAKFKDDCGIVYCLSRNDCDTYAEQMKINGIKAMGYHAGLSDKQR 744
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S + WIS + +VV AT+AFGMGID+ +VR V H ++PKS+E +YQESGRAGRD ++
Sbjct: 745 SDIQGRWISEQIKVVCATIAFGMGIDKPNVRFVIHASLPKSIEGYYQESGRAGRDSENAE 804
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
+L+Y D R ++ + + N + + K + + +MV +CE + CRR
Sbjct: 805 CILFYNYADMYRHRKMIEMDVASN-------KTAQKTHMDNLFKMVTFCENTTDCRRALQ 857
Query: 304 LESFGEQIPVSLC----KNSCDACKH 325
L FGE +C + +CD C++
Sbjct: 858 LNYFGELFDREICIANKQTACDNCRN 883
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 195/310 (62%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEVR K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDASIHIASFNRPNLYYEVRAKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ L GI+ YHAG+ND+ RS +I Q
Sbjct: 228 QYIKGQKGS-GIVYCISRKTVDQVAEQLQKDGINALPYHAGMNDQERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 195/330 (59%), Gaps = 15/330 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++YEDL +P L+LLYVTPE L A+ + +K+H R L IDEAHC+S WGHDF
Sbjct: 648 EVYEDLRRAEPLLKLLYVTPEKLAASNLLKNTFEKLHRRNQLARFVIDEAHCVSQWGHDF 707
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
R Y KL LR P VPI+ALTATA+P V+KD+++ L ++ P SFNRPNL Y++
Sbjct: 708 RVDYHKLGQLRQTFPGVPIMALTATASPSVRKDILKQLLMKEPKWFLQSFNRPNLRYQI- 766
Query: 125 YKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + ++ + IVYCL R CD+ +A L + GIS +YHAG+ND
Sbjct: 767 VKYFSGSPVTHIIKLISNKYFEKSGIVYCLSRKDCDQTAAKLESAGISAVSYHAGMNDAE 826
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RSS+ D WI+ RK VV AT+AFGMGID+ +VR V H +PKS+E +YQE+GRAGRD LPS
Sbjct: 827 RSSIQDMWINGRKHVVCATIAFGMGIDKANVRFVFHTGLPKSVEGYYQETGRAGRDGLPS 886
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKK 302
+L+Y D R + +++ T S K +++ MV +C C RK
Sbjct: 887 DCVLFYRFADYIRWQKLITGGA-------ETTASSRKIHLANLWHMVRFCMNEIDCIRKL 939
Query: 303 ILESFGEQIPVSLC----KNSCDACKHPNL 328
IL FG++ LC + +C+ C+ L
Sbjct: 940 ILRYFGQEFDKKLCSVNFETTCENCRRQKL 969
>gi|218438410|ref|YP_002376739.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
gi|218171138|gb|ACK69871.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 7424]
Length = 709
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 197/309 (63%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F L I + ++ AIDEAHC+S WGHDFRP YR+L LR
Sbjct: 111 IKLLYVAPERLLSEKFTPFLDTIAQQVGISAFAIDEAHCVSEWGHDFRPEYRQLRQLRKR 170
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP+ ALTATA +VQ+D++ L L+NP + +SFNR NL+Y+++ K+ +Y L
Sbjct: 171 YPNVPMFALTATATKRVQQDIILQLDLKNPGIHIASFNRTNLYYDIKPKE--KRSYNQLL 228
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++A+ + IVYC+ R DE++ L GIS YHAGL D+AR+ +I +
Sbjct: 229 KYIRAHQGS-GIVYCMSRRNVDEIAFRLQNDGISALPYHAGLTDEARTLNQTRFIRDDVR 287
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGI++ DVR V HF++P+++E++YQESGRAGRD P+K LL Y + D +++
Sbjct: 288 VMVATVAFGMGINKPDVRFVVHFDLPRNLESYYQESGRAGRDGEPAKCLLLYSLGDLKKI 347
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+I+ + + Q + ++ Q++DY EG+ CRR +L FGE+ + C
Sbjct: 348 EYIIEQKTNPQEQKIARQQ---------LRQVIDYAEGTECRRTIVLRYFGERFKGN-C- 396
Query: 318 NSCDACKHP 326
N+CD C+HP
Sbjct: 397 NNCDNCRHP 405
>gi|281204428|gb|EFA78623.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 1358
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 204/327 (62%), Gaps = 15/327 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+T+I+++L S P+++LLY+TPE + + +S +++SRG L IDEAHC+S WGH
Sbjct: 767 QTRIFKELRSDNPTIKLLYLTPEKVVQSTSIISLFHQLNSRGKLIRAVIDEAHCVSQWGH 826
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y++L+ L+ P +PILALTATA +V++DV+ +L +++ + K SFNRPNL Y
Sbjct: 827 DFRPDYKQLAILKREFPKLPILALTATATERVKQDVIFNLSMKDSITFKQSFNRPNLIYA 886
Query: 123 V--RYKDLLDDAYADLCSVLKANG--DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
V + K ++DD + + ANG I+YC C++++ L++ G+ YHA
Sbjct: 887 VVKKKKSIIDD----IIEFITANGYKQKSGIIYCFSTFECEKVAQELNSKGLKVKFYHAK 942
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
+ + R ++W R +++V+T+AFGMGI++ DVR V H ++PKS+E +YQESGRAGR
Sbjct: 943 MTPEDRQRTQENWTRDRVKIIVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGR 1002
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-G 297
D + +LYY D+ R++ +L + + S S RE + ++MV YCE S
Sbjct: 1003 DSQTAHCILYYSYADKYRIDSLLESSSGQGSTYQSIRENK-----DNLNKMVSYCENSVD 1057
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACK 324
CRR+ L+ GEQ ++C +CD CK
Sbjct: 1058 CRRQLQLQYLGEQFDRTICAKTCDNCK 1084
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 15/320 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L S PS RLLYVTPE ++ + F++ L+++H RGL V +DEAHC+S+WGHDFR
Sbjct: 107 IYRELGSRNPSFRLLYVTPEKISRSETFLNILRRLHERGLFKRVVVDEAHCVSNWGHDFR 166
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRKL ++ PDVP++ALTATA VQ+D++ L ++N + LK SFNR NL+YEVR
Sbjct: 167 PDYRKLGIFKDEFPDVPLIALTATATGIVQEDIIHQLKIKNCVSLKGSFNRTNLYYEVRK 226
Query: 126 KDLLDDAYADLCSVL-KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L+ ++ + K + I+YCL + C++++ L+ G Y++ + +
Sbjct: 227 KQTLEKTAKEISEFINKKYPNQSGIIYCLSKKDCEKMAEELTTLGHDVGVYNSDIKAADK 286
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V + W +++VAT+AFGMGI++ DVR V H ++PKS+E +YQESGRAGRD LPS
Sbjct: 287 QEVHEKWSRDELKIIVATIAFGMGINKPDVRFVIHHSLPKSIEDYYQESGRAGRDGLPSH 346
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKI 303
+L+Y D+ R Q F E ++K + +++V YCE CRR
Sbjct: 347 CILFYSYADKAR------------QQKFLENENTNKSGYENINKIVSYCENDCECRRVVQ 394
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGE +C CD C
Sbjct: 395 LRHFGESFDPKVCSKMCDNC 414
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 150/332 (45%), Positives = 200/332 (60%), Gaps = 24/332 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ KIY +L SG PS++LLYVTPE ++A+ S +H RGLL IDEAHC+S WGH
Sbjct: 326 QEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFDLHRRGLLARFVIDEAHCVSQWGH 385
Query: 63 DFRPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
DFRP Y KLSSLR P VPI+ALTATA PK+ D + L +QN + SSF R NL
Sbjct: 386 DFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTDARDHLKMQNSKLFISSFVRDNLK 445
Query: 121 YEVRYKDLLDDAYADLCSVLKANGD----TCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y DL+ A L +V++ IVYCL R C+ + L+ G+S YH
Sbjct: 446 Y-----DLIPKAARSLINVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYH 500
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AGLND R SV WI+++ V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRA
Sbjct: 501 AGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRA 560
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG- 295
GRD +PS L+ Y D R+ ++ + + +T RS +++ Q+V YCE
Sbjct: 561 GRDGMPSYCLMLYSYHDSIRLRRMIEEGNT------TTGVRSMH--LNNVLQVVAYCENV 612
Query: 296 SGCRRKKILESFGEQIPVSLCKNS---CDACK 324
S CRRK ++E FGE C+NS CD C+
Sbjct: 613 SVCRRKMLVEHFGEVYDEQSCRNSKTPCDICE 644
>gi|335297361|ref|XP_003358019.1| PREDICTED: ATP-dependent DNA helicase Q5 [Sus scrofa]
Length = 451
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/311 (43%), Positives = 196/311 (63%), Gaps = 10/311 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP +LLY+TPE+ A+ F LK + +R LL+ + +DEAHC+S WG
Sbjct: 103 QERKELLSDLEQEKPRTKLLYITPEMAASASFQPTLKSLLARHLLSYLVVDEAHCVSQWG 162
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA +VQ+DV +L L+ P+ K+ R NLF
Sbjct: 163 HDFRPDYLRLGALRSRLAHAPCVALTATATLQVQEDVFAALHLKQPVATFKTPCFRANLF 222
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+LL D Y +L LKA G C IVYC R C++L+ LSA G++
Sbjct: 223 YDVQFKELLSDPYGNLRDFCLKALGQKADKGLSGCGIVYCRTREACEQLAIELSARGVNA 282
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 283 KAYHAGLKAAERTLVQNEWMEGKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 342
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K ++S F +V +
Sbjct: 343 SGRAGRDGRPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKAALSAFDALVAF 401
Query: 293 CEGSGCRRKKI 303
CE SG R +
Sbjct: 402 CEESGRSRAAL 412
>gi|425433706|ref|ZP_18814184.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
gi|389675683|emb|CCH95185.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9432]
Length = 701
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDASIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ +L GI+ YHAG+ND+ RS +I Q
Sbjct: 228 QYIKGKKGS-GIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|425450984|ref|ZP_18830806.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
gi|389767941|emb|CCI06812.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 7941]
Length = 701
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDASIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ +L GI+ YHAG+ND+ RS +I Q
Sbjct: 228 QYIKGKKGS-GIVYCISRKTVDQVAEHLQKDGINALPYHAGMNDQERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|428213965|ref|YP_007087109.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
gi|428002346|gb|AFY83189.1| ATP-dependent DNA helicase RecQ [Oscillatoria acuminata PCC 6304]
Length = 836
Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 199/310 (64%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F+ + + ++ ++ AIDEAHC+S WGHDFRP YR++ LR
Sbjct: 118 IKLLYVAPERLLSERFLPFMDLVRAQVGISGFAIDEAHCVSEWGHDFRPEYRQMQLLRQR 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P++P++ALTATA +V++D+ + L L++P + +SFNRPNL+YEVR K+ +Y +L
Sbjct: 178 YPEIPMMALTATATDRVRQDITQQLALRDPKIHIASFNRPNLYYEVRQKN--KQSYRELV 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + + I+YCL R DE++ L GI YHAG+ND+ RSS +I Q
Sbjct: 236 KLIRESKGS-GIIYCLSRRRVDEVAYKLQREGIDAIPYHAGMNDQERSSNQTRFIRDDAQ 294
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+ +++G D + +
Sbjct: 295 VIVATIAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRAGRDGEPANCTMFFGYGDIKTI 354
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+I+ + + Q + ++ Q+++Y E + CRR L FGE+ P + C+
Sbjct: 355 EYIIDQKTDVDEQRIARQQ---------LRQIINYSESTVCRRTIQLGYFGERFPGN-CE 404
Query: 318 NSCDACKHPN 327
N CD C+HPN
Sbjct: 405 N-CDNCRHPN 413
>gi|307106002|gb|EFN54249.1| hypothetical protein CHLNCDRAFT_16802, partial [Chlorella
variabilis]
Length = 351
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 132/271 (48%), Positives = 180/271 (66%), Gaps = 12/271 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ EDL +P +LLYVTPEL AT GFM L+ ++ G L LVA+DEAH IS+ GHD
Sbjct: 83 RRRLLEDLQQHRPDTQLLYVTPELLATAGFMRCLRGAYAAGALQLVAVDEAHSISAMGHD 142
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE- 122
FRP+YR+L ++R LP +P++ALTATA+ +VQ+D++ L ++ P +L++SF+RPN+ YE
Sbjct: 143 FRPAYRQLGAVRRELPRLPLMALTATASDRVQRDIVRQLGMREPRLLRTSFDRPNIRYEG 202
Query: 123 ---VRYKDLLDDAYADLCSVLKANGD------TCAIVYCLERTTCDELSAYLSAGGISCA 173
+ + LL A CS + C ++YC R D ++A L A GI+ A
Sbjct: 203 GCPLASRRLL--ALHACCSRRQPGEQQGKVPVPCTVIYCHRREDVDRVAAALRAHGIAAA 260
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
AYHAGL RS VL DW + R VV ATVAFGMGIDR DVR V H ++P S+EA+YQE+
Sbjct: 261 AYHAGLPGATRSRVLQDWQAGRLAVVAATVAFGMGIDRADVRYVLHHSLPGSLEAYYQEA 320
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKN 264
GRAGRD PS+S++YY DR R EF+L +
Sbjct: 321 GRAGRDGAPSRSIVYYSRRDRERHEFVLRRQ 351
>gi|75908908|ref|YP_323204.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
gi|75702633|gb|ABA22309.1| ATP-dependent DNA helicase RecQ [Anabaena variabilis ATCC 29413]
Length = 718
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 209/334 (62%), Gaps = 17/334 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QV+++ E + +GK +RLLYV PE + F+ L ++ + +++ AIDEAHC+S WG
Sbjct: 97 QVRSR-EEAILNGK--VRLLYVAPERLLSERFLPFLDLVNEKVGISIFAIDEAHCVSEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L SLR P+VP+LALTATA +V+ D+++ L L+ P + +SFNR NL+Y
Sbjct: 154 HDFRPEYRQLKSLRKRYPNVPVLALTATATDRVRSDIIQQLGLKQPSIHLASFNRQNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K AYA+L +++ N + AI+YCL R +EL+ L IS +YHAGL D
Sbjct: 214 EVRPKS--KQAYAELLELIRDN-EGSAIIYCLTRKKVEELTFKLQKDKISALSYHAGLPD 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
RS +I +V+VAT+AFGMGI++ DVRLV HF+IP+++E++YQESGRAGRD
Sbjct: 271 DERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGE 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+ +++ D + +E+ + + Q + ++ QM+DY EG+ CRR
Sbjct: 331 PSRCTIFFSFGDIKTIEWSIEQKTDPQEQLIAKQQ---------LRQMIDYAEGTDCRRT 381
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
L FGE+ + C N CD C++P + + E
Sbjct: 382 IQLGYFGERFAGN-CGN-CDNCRYPKPMQDWTIE 413
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 193/330 (58%), Gaps = 15/330 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L P+++LLY TPE G M S L+ ++ RGLL + IDEAHC+S WGHDF
Sbjct: 759 RIYMQLSRKDPAIKLLYATPEKVCASGRMISALQNLYERGLLARLVIDEAHCVSQWGHDF 818
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y++L LR P+VPI+ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 819 RPDYKRLHELRRMFPNVPIMALTATATPRVQKDILNQLAMTRPQVFTMSFNRNNLKYSVL 878
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + + K IVYCL R CD L+ L GI+ AYHAGL+D R
Sbjct: 879 PKKPKKVDEECIQWIKKYYPRDSGIVYCLSRNDCDTLADSLQRAGIAALAYHAGLSDSDR 938
Query: 185 SSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
V + WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 939 EYVQNKWINQDGCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEIS 998
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKK 302
+L+Y D R++ +++ ++ N QS +T I++ MV +CE + CRR +
Sbjct: 999 HCVLFYSYSDVIRIKRLIAMDKDGNQQSKATH-------INNLHSMVHFCENVAECRRIQ 1051
Query: 303 ILESFGEQ-IPVSLCKNS----CDACKHPN 327
+L FGE S CK CD C PN
Sbjct: 1052 LLAYFGEHTFNTSFCKEHPEVICDNCARPN 1081
>gi|119510429|ref|ZP_01629563.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
gi|119464958|gb|EAW45861.1| ATP-dependent DNA helicase [Nodularia spumigena CCY9414]
Length = 721
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 200/318 (62%), Gaps = 16/318 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + +GK +RLLYV PE + F+ L +H + ++ AIDEAHC+S WGHDFRP Y
Sbjct: 103 EAIRNGK--VRLLYVAPERLLSERFLPFLDLVHHQIGISTFAIDEAHCVSEWGHDFRPEY 160
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R+L SLR PDVP +ALTATA +V+ D+++ L L+ P + +SFNR NL+YEVR K
Sbjct: 161 RQLKSLRKRYPDVPTIALTATATDRVRGDIIQQLGLKQPSIHLASFNRQNLYYEVRPKT- 219
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
AYA++ +++ D I+YCL R DEL+ L + +YHAGL+D+ RS
Sbjct: 220 -KSAYAEILELIRET-DGSTIIYCLTRKKVDELTFKLQNDKVVALSYHAGLSDEERSKNQ 277
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+I +V+VAT+AFGMGI++ DVRLV HF++P+++E++YQESGRAGRD PS+ ++
Sbjct: 278 TRFIRDDVRVIVATIAFGMGINKPDVRLVVHFDLPRNLESYYQESGRAGRDSEPSRCTMF 337
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D + +E+ +++ Q + ++ Q++DY EG+ CRR L FG
Sbjct: 338 FSFSDIKTIEWSINQKADPQEQLIAKQQ---------LRQVIDYAEGTDCRRTIQLGYFG 388
Query: 309 EQIPVSLCKNSCDACKHP 326
E+ P + C N CD C++P
Sbjct: 389 ERFPGN-CDN-CDNCRYP 404
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 200/325 (61%), Gaps = 17/325 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L P L+LLYVTPE ++++ +S L+ ++SRG+L+ IDEAHC+S WGHDFR
Sbjct: 548 IYRELSRRDPQLKLLYVTPEKISSSSKLVSTLENLYSRGMLSRFVIDEAHCVSQWGHDFR 607
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L+ LR P VPI+ALTATA P+V+ D+++ L +++P+ SFNR NL Y + Y
Sbjct: 608 PDYKRLNKLRELFPTVPIMALTATATPRVRADIVKQLKIRSPIWFIQSFNRSNLKYSI-Y 666
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
D ++++A I+YCL R C++++A LS+ GIS AYHAGL +R
Sbjct: 667 PKKPSKVTQDCINLIQARFAGESGIIYCLSRNECEKVAAELSSAGISAKAYHAGLESNSR 726
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ W+ +VV AT+AFGMGID+ DVR V H ++PKS+E FYQESGRAGRD +
Sbjct: 727 TYTQQAWVRDEYKVVCATIAFGMGIDKPDVRFVIHHSLPKSIEGFYQESGRAGRDGNIAH 786
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R+ ++ + ++ N ++ I + +MV YCE + CRR ++
Sbjct: 787 CILFYSYQDMTRLRKVMER-ENDNFEAIRVH-------IENLQRMVQYCENETDCRRSQL 838
Query: 304 LESFGEQ-IPVSLC----KNSCDAC 323
LE GE+ I LC +CD C
Sbjct: 839 LEYLGEKVISYDLCSGIVSTACDNC 863
>gi|332260119|ref|XP_003279133.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 1 [Nomascus
leucogenys]
gi|332260121|ref|XP_003279134.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 2 [Nomascus
leucogenys]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 191/305 (62%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRTRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKSSERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|51242947|ref|NP_001003715.1| ATP-dependent DNA helicase Q5 isoform 2 [Homo sapiens]
gi|5410448|gb|AAD43061.1|AF135183_1 Recq helicase 5 [Homo sapiens]
gi|7959115|dbj|BAA95954.1| DNA helicase recQ5 gamma [Homo sapiens]
gi|16877308|gb|AAH16911.1| RECQL5 protein [Homo sapiens]
gi|119609699|gb|EAW89293.1| RecQ protein-like 5, isoform CRA_d [Homo sapiens]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 192/305 (62%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|426346802|ref|XP_004041060.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 3 [Gorilla gorilla
gorilla]
gi|426346804|ref|XP_004041061.1| PREDICTED: ATP-dependent DNA helicase Q5 isoform 4 [Gorilla gorilla
gorilla]
Length = 435
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 192/305 (62%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|307152715|ref|YP_003888099.1| RecQ family ATP-dependent DNA helicase [Cyanothece sp. PCC 7822]
gi|306982943|gb|ADN14824.1| ATP-dependent DNA helicase, RecQ family [Cyanothece sp. PCC 7822]
Length = 717
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 191/313 (61%), Gaps = 14/313 (4%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++LLYV PE + F L KI ++ AIDEAHC+S WGHDFRP YR+L L
Sbjct: 116 KNKIKLLYVAPERLLSEKFTPFLDKIALDVGISAFAIDEAHCVSEWGHDFRPEYRQLRQL 175
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P VP+ LTATA +VQ+D++ L L+NP V +SFNRPNL+Y+VR K +Y
Sbjct: 176 RQRYPSVPMFGLTATATKRVQEDIIVQLGLKNPGVHIASFNRPNLYYDVRPKQ--QRSYD 233
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L ++ + IVYCL R DE++ L GIS YHAG+ D+AR+ +I
Sbjct: 234 QLLKYIRTQKGS-GIVYCLSRRNVDEIAFRLQKDGISALPYHAGMTDEARTLNQTRFIRD 292
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
QV+VAT+AFGMGI++ DVR V HF++P+++E++YQESGRAGRD P+K ++ G D
Sbjct: 293 DAQVMVATIAFGMGINKLDVRFVVHFDLPRNLESYYQESGRAGRDGEPAKCTIFLGFGDL 352
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+++E+I+ Q N Q K + Q+++Y EG+ CRR +L FGE+ +
Sbjct: 353 KKIEYIIE--QKSNPQ-------EKKIAQQQLRQVINYAEGTECRRTIVLRYFGERFQGN 403
Query: 315 LCKNSCDACKHPN 327
C N CD C+HP
Sbjct: 404 -CDN-CDNCRHPQ 414
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/308 (43%), Positives = 188/308 (61%), Gaps = 9/308 (2%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L LLY++PE LTA+ F + L K+H L +A+DEAHC+S+WGHDFRP Y+ L R
Sbjct: 327 LDLLYISPEMLTASKKFKTTLDKLHKSRKLARIAVDEAHCLSNWGHDFRPDYKNLDYFRI 386
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+PI+ALTATA VQ D++ +L L PLVLK SFNR NLFYEV KD
Sbjct: 387 NYPDIPIVALTATANNLVQDDIIRNLRLGRPLVLKQSFNRNNLFYEVLPKDKKIVTSQIA 446
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+L IVYC + TC+++S L+ G+ + YHAG+ +K R V W S+R
Sbjct: 447 SYILNDFKSQSGIVYCHSKDTCEKVSMALTQMGVKASFYHAGMTNKQRDHVQKLWQSNRY 506
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QV+ ATVAFGMGID+ DVR V H+ +P+S+E +YQE+GRAGRD S + +Y +D R
Sbjct: 507 QVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQETGRAGRDGNFSYCITFYSFNDVRS 566
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSL 315
++ ++ ++ N ++ T + ++ YCE + CRRK+IL F E+ V+L
Sbjct: 567 LQKLIQTDKGLNKENKLTH-------LDKLQHVMAYCENTINCRRKQILSYFNEEFDVNL 619
Query: 316 CKNSCDAC 323
C +CD C
Sbjct: 620 CHKNCDNC 627
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 194/323 (60%), Gaps = 20/323 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ +D+ SG+ +LLYV PE + + L+ I ++ VA+DEAHCIS WGHDF
Sbjct: 102 AKVKQDVLSGET--KLLYVAPESLSKQENIDFLRDID----ISFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + L ++PI+ALTATA PKVQ+D+ ++L +QN V KSSFNRPNLFYE+
Sbjct: 156 RPEYRKIRQIIGQLGENIPIIALTATATPKVQQDIQKNLQMQNSQVFKSSFNRPNLFYEI 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ +K+ I+YCL R +E++ L+ GI YHAGL+
Sbjct: 216 RPKK---NELKEIIKYIKSQNGKAGIIYCLSRKKVEEVAETLNVNGIKALPYHAGLDANT 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R++ D ++ QV+VAT+AFGMGID+ DVR V H+++PKSME +YQE+GRAGRD
Sbjct: 273 RATTQDKFLMEDVQVIVATIAFGMGIDKPDVRFVIHYDMPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ + + S RE ++ +++DY E S CRRK+I
Sbjct: 333 NCIAFYDQKDIDKLAKFMK------DKPVSEREIGTQI----LKEVIDYAESSVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE S C N CD C+ P
Sbjct: 383 LHYFGESYNESSCSNMCDNCRSP 405
>gi|193786741|dbj|BAG52064.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 192/305 (62%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 190/311 (61%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L ++R
Sbjct: 773 IQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMRE 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 833 KYPGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKDI 892
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + D C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 893 ADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSG 952
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ +VR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 953 KHNVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDS 1012
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +++ KN+ + R+R + ++ F CE + CRR +IL F E+
Sbjct: 1013 TSIGYMIKKNKETTYEQ-KQRQRQMLRHVTQF------CENITDCRRAQILAYFDEKFKR 1065
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1066 EDCNRTCDNCK 1076
>gi|428224630|ref|YP_007108727.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
gi|427984531|gb|AFY65675.1| ATP-dependent DNA helicase RecQ [Geitlerinema sp. PCC 7407]
Length = 741
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 206/334 (61%), Gaps = 10/334 (2%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+V+++ E LD ++LLYV PE F+ L + + L+ IDEAHC+S WG
Sbjct: 105 EVRSRQNEILDG---RIKLLYVAPERLLNEQFLLWLNDVRQQVGLSTFVIDEAHCVSEWG 161
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L +R P+VP++ALTATA +V++D+ E L L+ P V +SFNRPNL+Y
Sbjct: 162 HDFRPEYRQLLQIRQRFPEVPVMALTATATDRVRQDMGEQLALRQPYVHIASFNRPNLYY 221
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K ++Y +L ++ +C IVYCL R +EL+ L GI YHAGL+D
Sbjct: 222 EVRPKG--KNSYDELLQKIRHVEGSC-IVYCLSRRRVNELTTRLQQEGIEALPYHAGLSD 278
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+ +I +V+VAT+AFGMGI++ DVRLV H+++P+++EA+YQESGRAGRD
Sbjct: 279 DVRTENQTRFIRDDVRVIVATIAFGMGINKPDVRLVMHYDLPRNIEAYYQESGRAGRDGE 338
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
++ LL+YG D + +++I+ +Q + + E+ + + Q++DY E + CRR
Sbjct: 339 TAQCLLFYGPGDIKSLDWII--DQKVHPVTGEPLEQEQRIARQQLRQVIDYAESTVCRRT 396
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
L FGE+ P + C+N CD C HP L + E
Sbjct: 397 IQLSYFGEEFPGN-CQN-CDNCLHPKPLEDWTIE 428
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 190/311 (61%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L ++R
Sbjct: 804 IQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMRE 863
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 864 KYPGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKDI 923
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + D C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 924 ADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSG 983
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ +VR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 984 KHNVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDS 1043
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +++ KN+ + R+R + ++ F CE + CRR +IL F E+
Sbjct: 1044 TSIGYMIKKNKETTYEQ-KQRQRQMLRHVTQF------CENITDCRRAQILAYFDEKFKR 1096
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1097 EDCNRTCDNCK 1107
>gi|313223438|emb|CBY40419.1| unnamed protein product [Oikopleura dioica]
Length = 636
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 198/339 (58%), Gaps = 14/339 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I +DL SG P R+LYVTPE T F+ + ++SR L++LVAIDEAHC+S WGHDFRP
Sbjct: 186 IMDDLYSGVPKTRILYVTPEQVQTQRFIKLARWMNSRCLIHLVAIDEAHCVSQWGHDFRP 245
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y KL LR +P+ +A TATA K+++DV L ++ V ++ R NL+Y+V+ K
Sbjct: 246 DYLKLGLLREIIPNARFVACTATATKKIEEDVCRILKMKKCAVFRTGITRENLYYDVKMK 305
Query: 127 DLLDDAYADLCSVLK---------ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
D+L + + L + + + + IVYC R C+E++ L+ G+ YHA
Sbjct: 306 DILPNPHKHLANFARECIGKQRPDGSYEGAGIVYCFRRDDCEEMAVSLTRLGVEAEPYHA 365
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL + R+ V +DW R V+ AT++FGMG+D+++VR V H+ +PKS+ + QESGRAG
Sbjct: 366 GLKPETRTRVQEDWTEGRVPVICATISFGMGVDKENVRFVAHWTLPKSLAGYLQESGRAG 425
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKK---SISDFSQMVDYCE 294
RD PSK LYY +++R + FI+ K + E++ KK + F + YCE
Sbjct: 426 RDNKPSKCRLYYSREEQRSLIFIIKKPLMWKKKDIGNAEQNKKKVMIQLRQFESVTKYCE 485
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
+ CR + + + FGE CK +CD C + +A+ L
Sbjct: 486 ATDCRHRTMAKFFGEN--TDDCKTNCDGCTNKVQVAREL 522
>gi|51242943|ref|NP_001003716.1| ATP-dependent DNA helicase Q5 isoform 3 [Homo sapiens]
gi|5410449|gb|AAD43062.1|AF135183_2 Recq helicase 5 [Homo sapiens]
gi|4191812|dbj|BAA74454.1| DNA helicase [Homo sapiens]
gi|7959111|dbj|BAA95952.1| DNA helicase recQ5 alpha [Homo sapiens]
gi|119609700|gb|EAW89294.1| RecQ protein-like 5, isoform CRA_e [Homo sapiens]
gi|119609701|gb|EAW89295.1| RecQ protein-like 5, isoform CRA_e [Homo sapiens]
Length = 410
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/305 (43%), Positives = 192/305 (62%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY +DR ++ F++ K +K + + S K +I F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAKLQEKRGNKA-SDKATIMAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|407928616|gb|EKG21469.1| Helicase [Macrophomina phaseolina MS6]
Length = 492
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 203/358 (56%), Gaps = 31/358 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
KT I EDL G P RLLY+TPE F L+ IH+ L +AIDEAHCIS WGHD
Sbjct: 109 KTAIMEDLQCGHPRTRLLYITPEYCQLDSFRRILRIIHTHRELARIAIDEAHCISEWGHD 168
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK---SSFNRPNLF 120
FRPS++ LS ++ PDVPI+ LTATA +V+ D++ +L L +P LK S +RPNL
Sbjct: 169 FRPSFKNLSFFKHEFPDVPIICLTATATAQVRDDIVRTLAL-DPATLKLYTMSTSRPNLH 227
Query: 121 YEVRYKDLLDDAYAD----LCSV-------------LKANGDT----CAIVYCLERTTCD 159
YEVR+K +D Y D LC+V L+A+G IVY L R +C+
Sbjct: 228 YEVRFKSDEEDHYDDFVRWLCAVQARRTADPERASALRASGKRPEALSGIVYTLFRRSCE 287
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
L+ L A GI YHAGL++ + + L W+++ ++VVAT AFGMGID++DVR V
Sbjct: 288 GLAERLRASGIGARPYHAGLSNAEKDAALSGWVANAPGYEIVVATTAFGMGIDKEDVRFV 347
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN---QSKNSQSFST 274
H+ +PKS E FYQE+GRAGRD + +LYY +DR R +++++ + S
Sbjct: 348 VHWELPKSFEGFYQEAGRAGRDGKAAACILYYSREDRDRAAGMMARDMPSECAGGGGVSA 407
Query: 275 RERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
+ ++VDYCE + CR K I E FGE C+ +CD CK L +
Sbjct: 408 AMEKHRSRAESLKKLVDYCEETRRCRHKMIAEYFGENGEAVPCEWACDWCKDAKALKR 465
>gi|430812018|emb|CCJ30545.1| unnamed protein product [Pneumocystis jirovecii]
Length = 704
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 206/360 (57%), Gaps = 35/360 (9%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
++ + +I EDL G P +RLLYVTPEL +T F +KL ++ G L+ IDEAHC+S W
Sbjct: 102 IENRKRILEDLACGHPQVRLLYVTPELLSTENFRNKLLNVYQHGELHRFVIDEAHCVSEW 161
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK---SSFNRP 117
GHDFR Y+ LS LR P +PI+ALTATA KV+ D+ + L L P LK F+R
Sbjct: 162 GHDFRKDYKLLSFLRKKYPKIPIMALTATATEKVRLDIAKILGLPAPPTLKVFIEPFSRK 221
Query: 118 NLFYEVRYKDLLDDAYAD----LCSV---------------LKANG-------DTCAIVY 151
NL +EVR+K D Y D + SV + NG C I+Y
Sbjct: 222 NLHFEVRFKSDGKDHYEDFRKFILSVYARKKKRLFLENKNFIDQNGGNYDIPVSICGIIY 281
Query: 152 CLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDR 211
+R TC+E++ L GI+ +YHAGL+ R + W + ++VAT+AFGMG+D+
Sbjct: 282 AKKRGTCEEVAERLKNDGINAQSYHAGLSSTMRDKTMKLWYEGKIDIIVATIAFGMGVDK 341
Query: 212 KDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS 271
+DVR V H+++ KSMEA+YQE+GRAGRD S+ +LYY +DR + +IL + + + +
Sbjct: 342 EDVRFVVHWDMSKSMEAYYQEAGRAGRDNKTSRCILYYSREDRDKTRYILHQEKEQKKRK 401
Query: 272 FSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS----LCKNSCDACKHP 326
+ E + +I+ F +V YCE + CR ++E F E I + C SCD CK+P
Sbjct: 402 RES-EGNDLSNINSFEMLVKYCENVTKCRHLFLVEYFSETISENSNNQYCIKSCDICKNP 460
>gi|186683728|ref|YP_001866924.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
gi|186466180|gb|ACC81981.1| ATP-dependent DNA helicase RecQ [Nostoc punctiforme PCC 73102]
Length = 719
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 203/327 (62%), Gaps = 16/327 (4%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + SGK +RLLYV PE + F+ L + + + AIDEAHC+S WGHDFRP Y
Sbjct: 103 EAILSGK--VRLLYVAPERLLSERFLPFLDLVKEKIGIAAFAIDEAHCVSEWGHDFRPEY 160
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R++ SLR PDVP LALTATA +V+ D+++ L L+ P + +SFNR NL+YEVR K
Sbjct: 161 RQMKSLRKRYPDVPTLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRSKT- 219
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
AYA+L +++ N + AI+YCL R DEL+ L IS +YHAGL+D+ RSS
Sbjct: 220 -KSAYAELLELIREN-EGSAIIYCLTRKKVDELTFKLQNDKISALSYHAGLSDEERSSNQ 277
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+I +V+VAT+AFGMGI++ DVRLV HF++P+++E++YQESGRAGRD PS+ L+
Sbjct: 278 TRFIRDDVRVMVATIAFGMGINKPDVRLVIHFDLPRNLESYYQESGRAGRDSEPSRCTLF 337
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D + +E+ + + Q + ++ Q++DY +G+ CRR L FG
Sbjct: 338 FSFSDIKTIEWSIDQKTDPQEQLIAKQQ---------LRQVIDYAQGTVCRRTIQLGYFG 388
Query: 309 EQIPVSLCKNSCDACKHPNLLAKYLGE 335
E+ + C N CD C++P + + E
Sbjct: 389 ERFDGN-CAN-CDNCRYPKPMQDWTIE 413
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 198/329 (60%), Gaps = 24/329 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL S P+++LLYVTPE ++A+ +S +H RGLL IDEAHC+S WGHDFR
Sbjct: 363 IYSDLTSENPTIKLLYVTPEKISASGRLISVFYTLHRRGLLARFVIDEAHCVSQWGHDFR 422
Query: 66 PSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
P Y KLS+LR P VPI+ALTATA PK+ D +L +QN + SSF R NL Y
Sbjct: 423 PDYTKLSTLREKFHNPPVPIIALTATATPKIVTDARYNLKMQNSKLFISSFVRDNLKY-- 480
Query: 124 RYKDLLDDAYADLCSVLKANGD----TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
DL+ A L +V++ IVYCL R C+ + L+ G+S YHAGL
Sbjct: 481 ---DLIPKAAKSLINVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGL 537
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
ND R SV W++++ V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 538 NDGLRVSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRD 597
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
+PS L+ Y D R+ ++ + + +T RS +++ Q+V YCE S C
Sbjct: 598 GMPSYCLMLYSYHDSIRLRRMIEEGNT------TTGVRSMH--LNNVLQVVAYCENVSVC 649
Query: 299 RRKKILESFGEQIPVSLCKNS---CDACK 324
RRK ++E FGE C+NS CD C+
Sbjct: 650 RRKMLVEHFGEVYDEQSCRNSKTPCDVCE 678
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 195/328 (59%), Gaps = 14/328 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++E L S + ++ YVTPEL A G F + + RG L IDEAHC+S WGHDFR
Sbjct: 315 VFEALGSDELICKIFYVTPELIAKSGHFHEVVSGLVRRGRLKRFVIDEAHCVSQWGHDFR 374
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L S+R P VPI+ALTATA KV+ D++E+L ++ K SFNR NL YEVR
Sbjct: 375 PDYKELGSIRRRYPSVPIIALTATATKKVELDILENLGIRGCETFKMSFNRANLRYEVRA 434
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ S ++ + D C I+YC + C+ +S L + A YHAGL+ R
Sbjct: 435 K--TSTVELDIVSFVQTHFPDCCGIIYCTSKKECEMISEKLKKH-MKTAFYHAGLSKNER 491
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+SV + W +V+VAT+AFGMGID+KDVR V H+ IPKS+E +YQE+GRAGRD L S
Sbjct: 492 NSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESV 551
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D++++ F++ K Q +E D ++ +CE + CRR ++
Sbjct: 552 CVLFYTYGDKKKISFMIEKGDGGYEQKQRQKE--------DLEAVIQFCENKTDCRRMQV 603
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAK 331
L FGE+ LC+ +CD C+ ++ +
Sbjct: 604 LAHFGEKFDPQLCRKTCDNCRRETIVKR 631
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/328 (41%), Positives = 195/328 (59%), Gaps = 14/328 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++E L S + ++ YVTPEL A G F + + RG L IDEAHC+S WGHDFR
Sbjct: 319 VFEVLGSEELICKIFYVTPELIAKSGHFHDVVSGLVRRGRLKRFVIDEAHCVSQWGHDFR 378
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L S+R P VPI+ALTATA KV+ D++E+L ++ K SFNR NL YEVR
Sbjct: 379 PDYKELGSIRARYPSVPIIALTATATKKVELDILENLGIRGCETFKMSFNRSNLRYEVRA 438
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ S ++ + D C I+YC + C+ +S L + A YHAGL+ R
Sbjct: 439 K--TSTVELDIVSFVQTHFPDCCGIIYCTSKKECEMISDRLKKY-MKTAFYHAGLSKNER 495
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+SV + W +V+VAT+AFGMGID+KDVR V H+ IPKS+E +YQE+GRAGRD L S
Sbjct: 496 NSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESV 555
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D++++ F++ K Q RE D ++ +CE + CRR ++
Sbjct: 556 CVLFYTYGDKKKISFMIEKGDGGYEQKQRQRE--------DLEAVIQFCENKTDCRRMQV 607
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAK 331
L FGE+ +CK +CD C+ ++ K
Sbjct: 608 LAHFGEKFDPQMCKKTCDNCRREAIVKK 635
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 196/330 (59%), Gaps = 15/330 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
QV + +Y DL P +LLYVTPE ++++ +S LK ++ RGLL+ IDEAHC+S W
Sbjct: 101 QVASGVYMDLARRTPQTKLLYVTPEKVSSSEKLLSTLKSLYQRGLLDRFVIDEAHCVSQW 160
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+KL LR P VP++ALTATA P+V++D++ L + +P SFNR NL
Sbjct: 161 GHDFRPDYKKLCVLRKSFPGVPMMALTATATPRVRRDILHQLGMTDPRWFVQSFNRTNLH 220
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
Y V K + L + IVYCL R C+ +S L G S AYHAG++
Sbjct: 221 YSVMPKKVKSATKEVLELINSRFRSKTGIVYCLSRKECETVSDELCRNGTSACAYHAGMS 280
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
DK R+ + D W K V+ AT+AFGMGID+ DVR V H+++PKS+E +YQESGRAGRD
Sbjct: 281 DKERARIQDLWPEHYK-VICATIAFGMGIDKPDVRFVIHYSLPKSVEGYYQESGRAGRDG 339
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCR 299
S +L+Y D+ RM+ ++ ++ + S K + + +MV YCE S CR
Sbjct: 340 EASDCILFYNYHDKMRMQKLIHMDKEATYE-------SRKVHMDNLLRMVQYCENESDCR 392
Query: 300 RKKILESFGE-----QIPVSLCKNSCDACK 324
R ++L FGE ++ S + +CD CK
Sbjct: 393 RAQLLHYFGETDFNPELCTSDPRTTCDNCK 422
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 190/311 (61%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L ++R
Sbjct: 804 IQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMRE 863
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 864 KYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKDI 923
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + D C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 924 ADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSG 983
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 984 KHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDS 1043
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +++ KN+ + + R+R + ++ F CE + CRR +IL F E+
Sbjct: 1044 TSIGYMIKKNK-ETTHEQKQRQRQMLRHVTQF------CENITDCRRAQILAYFDEKFKR 1096
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1097 EDCNRTCDNCK 1107
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 196/329 (59%), Gaps = 22/329 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY DL S +P ++LLYVTPE ++ G F + L +H+ L IDEAHC+S+WGHDF
Sbjct: 754 RIYYDLQSPRPKMKLLYVTPEKISSSGRFQNVLSGLHAMKQLARFVIDEAHCVSAWGHDF 813
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYEV 123
RP Y+KLS LR P +PI+ALTATA P+V+ DV++ L L++ SFNRPNL Y V
Sbjct: 814 RPDYKKLSVLREQFPSIPIMALTATANPRVRVDVIKQLRLKSDTKWFLCSFNRPNLKYIV 873
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + + + K IVYCL + CD+L+A + + GIS +YHAGL+D
Sbjct: 874 RPKQGVATKQEIIDLIKKKYPRASGIVYCLAKKDCDQLAAEMKSAGISAKSYHAGLSDSQ 933
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R S DWI+ + +VV AT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S
Sbjct: 934 RESTQKDWIADKTKVVCATIAFGMGIDKPDVRYVIHHSIPKSIEGYYQEAGRAGRDGDFS 993
Query: 244 KSLLYYGMDD----RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
+LYY D R+ M+F +S F + K +++ +MVDYCE + C
Sbjct: 994 TCILYYNYSDMLRFRKMMDF-------DSSIPFEAK----KVHVNNLFRMVDYCENVTDC 1042
Query: 299 RRKKILESFGEQIPVSLC----KNSCDAC 323
RR + L F E C +CD C
Sbjct: 1043 RRSQQLNYFAEHFTREQCLENRATACDNC 1071
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 200/339 (58%), Gaps = 15/339 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++E L S + ++ YVTPEL A G F + ++ RG L IDEAHC+S WGHDFR
Sbjct: 318 VFEALRSDELICKIFYVTPELIAKSGHFHDVVSELVRRGRLKRFVIDEAHCVSQWGHDFR 377
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L S+R P VPI+ALTATA KV+ D++E+L ++ K SFNR NL YEVR
Sbjct: 378 PDYKELGSIRIRYPSVPIIALTATATKKVELDILENLGIRGCETFKMSFNRSNLRYEVRA 437
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ S ++ + D C I+YC + C+ +S L + A YHAGL+ R
Sbjct: 438 K--TSTVELDIVSFVQTHFPDCCGIIYCTSKKECEMISDKLKKY-MKTAFYHAGLSKNER 494
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+SV + W +V+VAT+AFGMGID+KDVR V H+ IPKS+E +YQE+GRAGRD L S
Sbjct: 495 NSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESV 554
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D++++ F++ K Q RE D ++ +CE + CRR ++
Sbjct: 555 CVLFYTYGDKKKISFMIEKGDGGYEQKQRQRE--------DLEAVIQFCENKTDCRRMQV 606
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAK-YLGELTSAVL 341
L FGE+ +C+ +CD C+ ++ K Y E +L
Sbjct: 607 LGHFGEKFDPQMCRKTCDNCRREAMVKKDYTKEARDLIL 645
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 190/311 (61%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L ++R
Sbjct: 775 IQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMRE 834
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 835 KYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKDI 894
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + D C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 895 ADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSG 954
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 955 KHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDS 1014
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +++ KN+ + + R+R + ++ F CE + CRR +IL F E+
Sbjct: 1015 TSIGYMIKKNK-ETTHEQKQRQRQMLRHVTQF------CENITDCRRAQILAYFDEKFKR 1067
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1068 EDCNRTCDNCK 1078
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 197/327 (60%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L +P+L++LYVTPE ++A+ F + L ++ R LL IDEAHC+S WGHDFR
Sbjct: 611 IYRELSKKEPALKILYVTPEKISASQKFCNTLTILYERELLTRFVIDEAHCVSQWGHDFR 670
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y+KL LRN P VP +ALTATA P+V+ D++ L + NP SSFNRPNL Y +
Sbjct: 671 PDYKKLKCLRNNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLRYSIIS 730
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A + + K +TC IVYCL R C++ +A++ GI +YHAGL+D
Sbjct: 731 KKGKNCSDEIVAMIMTKFK---NTCGIVYCLSRKDCEDYAAHMKKNGIKVLSYHAGLSDT 787
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+ WIS V+ AT+AFGMGID+ +VR V H +PKS+E++YQESGRAGRD
Sbjct: 788 QRSNCQGKWISDEVHVICATIAFGMGIDKPNVRFVIHAALPKSIESYYQESGRAGRDGEI 847
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +L+Y D R+ + ++ + N Q ST + + +MV +CE + CRR
Sbjct: 848 ADCILFYHYADMHRIRKMFEQD-NPNPQVISTH-------MDNLFKMVAFCENRTDCRRS 899
Query: 302 KILESFGEQIPVSLCKN----SCDACK 324
L FGE C + +CD C+
Sbjct: 900 LQLNYFGEIFDRQQCISNKIATCDNCR 926
>gi|428310069|ref|YP_007121046.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
gi|428251681|gb|AFZ17640.1| ATP-dependent DNA helicase RecQ [Microcoleus sp. PCC 7113]
Length = 757
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 196/310 (63%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F+ L+K+ ++ ++ AIDEAHC+S WGHDFRP YR++ LR
Sbjct: 158 IKLLYVAPERLLGEKFLPFLEKVRAQIGISAFAIDEAHCVSEWGHDFRPEYRQMKQLRQR 217
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PD+PILALTATA +VQ+D++E L L+ P + +SFNRPNL+YEV+ K+ +Y L
Sbjct: 218 YPDIPILALTATATKRVQQDILEQLTLRQPGIHIASFNRPNLYYEVQPKE--RHSYNQLL 275
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K++ + IVYCL R DE++ L GI YHAG++D+AR++ +I Q
Sbjct: 276 KKIKSHKGS-GIVYCLSRRAVDEVAFRLQKDGIDALPYHAGMSDEARATNQTRFIRDDVQ 334
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P ++E +YQESGRAGRD P+ L++G + R +
Sbjct: 335 VMVATIAFGMGINKPDVRFVIHYDLPHNLERYYQESGRAGRDGEPAHCTLFFGAGNIRTI 394
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++ + Q + ++ Q++DY EG+ CRR L FGE+ + C
Sbjct: 395 DYLIEQKPDPKEQRVARQQ---------LRQVIDYAEGTDCRRTIQLRYFGERFKGN-CG 444
Query: 318 NSCDACKHPN 327
N CD C++P
Sbjct: 445 N-CDNCRNPK 453
>gi|223558023|gb|ACM91029.1| ATP-dependent DNA helicase RecQ [uncultured bacterium URE4]
Length = 731
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 194/330 (58%), Gaps = 22/330 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ EDL SG +LLYV PE ++ LK+IH ++ A+DEAHCIS WGHDF
Sbjct: 104 AEVREDLLSG--VTKLLYVAPESLTKEENIALLKEIH----ISFYAVDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YRK+ S+ + P++ALTATA PKVQ D++++L + + V KSSFNRPNL+YEVR
Sbjct: 158 RPEYRKIRSIIEDIQPAPVIALTATATPKVQSDILKNLRISDATVFKSSFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D D+ ++ N I+YCL R +EL+ LS GI YHAGL+ K R
Sbjct: 218 DKV---DTEKDIIRFIRQNPGKSGIIYCLSRKKVEELAQLLSINGIQALPYHAGLDAKTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ QV+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AENQDRFLMEDIQVIVATIAFGMGIDKPDVRFVIHYDIPKSIEGYYQETGRAGRDGQEGL 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+ YY D +++E K Q E+ K + ++ V Y E S CRRK +L
Sbjct: 335 CITYYSYKDIQKLE--------KFMQGKPVAEQEIGKQL--LAETVAYAESSQCRRKLLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHPNLLAKYLG 334
FGE P C CD C HP AK+ G
Sbjct: 385 NYFGEDYPQDNC-GCCDNCLHPK--AKFDG 411
>gi|440748399|ref|ZP_20927652.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
gi|436483223|gb|ELP39291.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
Length = 725
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 201/331 (60%), Gaps = 22/331 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ +++ SGK +LLYV PE ++ LK+ L+ VAIDEAHCIS WGHDF
Sbjct: 97 TKVKKEVLSGKT--KLLYVAPESLTKDENIAFLKE----AKLSFVAIDEAHCISEWGHDF 150
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ S+ + P++PI+ALTATA PKVQ+D+ +L ++ + KSSFNRPNLFYEV
Sbjct: 151 RPEYRKIKSIIGQIGPELPIVALTATATPKVQQDIQRNLQMEEADIFKSSFNRPNLFYEV 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ + +K+ I+YCL R +E++ L GIS A YHAGL+
Sbjct: 211 RPK-VKNETKKAIIKYIKSQKGKSGIIYCLSRKKVEEIAELLKVNGISAAPYHAGLDQAV 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R DD+++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 270 RIKNQDDFLNEEIDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y DD ++E K ++ ER + K + +M Y E S CRR+ +
Sbjct: 330 HCLMFYRYDDIIKLE--------KFNKDKPVTERENAKVL--LEEMAAYAESSMCRRRVL 379
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLG 334
L FGE + C CD CK P + K+ G
Sbjct: 380 LHYFGEMLEED-C-GYCDNCKKP--MEKFEG 406
>gi|17227701|ref|NP_484249.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
gi|17135183|dbj|BAB77729.1| ATP-dependent DNA helicase [Nostoc sp. PCC 7120]
Length = 718
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 140/334 (41%), Positives = 207/334 (61%), Gaps = 17/334 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QV+++ E + +GK +RLLYV PE + F+ L + + +++ AIDEAHC+S WG
Sbjct: 97 QVRSR-EEAILNGK--VRLLYVAPERLLSERFLPFLDLVKEKVGISIFAIDEAHCVSEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L SLR P+VP+LALTATA +V+ D+++ L L+ P + +SFNR NL+Y
Sbjct: 154 HDFRPEYRQLKSLRKRYPNVPVLALTATATDRVRADIIQQLGLKQPSIHLASFNRQNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K AYA+L +++ N + I+YCL R +EL+ L IS +YHAGL D
Sbjct: 214 EVRPKS--KQAYAELLELIRDN-EGSTIIYCLTRKKVEELTFKLQKDKISALSYHAGLPD 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
RS +I +V+VAT+AFGMGI++ DVRLV HF+IP+++E++YQESGRAGRD
Sbjct: 271 DERSKNQTRFIRDDVRVMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGE 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
S+ +++ D + +E+ + + Q + ++ QM+DY EG+ CRR
Sbjct: 331 ASRCTIFFSFGDIKTIEWSIEQKTDPQEQLIAKQQ---------LRQMIDYAEGTDCRRT 381
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
L FGE+ P + C N CD C++P + + E
Sbjct: 382 IQLGYFGERFPGN-CGN-CDNCRYPKPMQDWTIE 413
>gi|427727826|ref|YP_007074063.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
gi|427363745|gb|AFY46466.1| ATP-dependent DNA helicase RecQ [Nostoc sp. PCC 7524]
Length = 718
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 197/318 (61%), Gaps = 14/318 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+RLLYV PE + F+ L +H + +++ AIDEAHC+S WGHDFRP YR+L SLR
Sbjct: 110 VRLLYVAPERLLSERFLPFLDLVHEKIGISIFAIDEAHCVSEWGHDFRPEYRQLKSLRKR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP+LALTATA +V+ D+++ L L+ P + +SFNR NL+YEVR K AYA+L
Sbjct: 170 YPNVPMLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRAKS--KQAYAELL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + + I+YCL R +EL+ L I+ YHAGL D RS +I +
Sbjct: 228 ELIR-DTEGSVIIYCLTRKKVEELTFKLQNDKIAVLPYHAGLPDAERSQNQTRFIRDDVR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVRLV HF+IP+++E++YQESGRAGRD PS+ +++ D + +
Sbjct: 287 VMVATIAFGMGINKPDVRLVVHFDIPRNLESYYQESGRAGRDGEPSRCTIFFSFADIKTI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ + + Q + ++ QM+DY EG+ CRR L FGE+ + C
Sbjct: 347 EWSIEQKTEPQEQLIARQQ---------LRQMIDYAEGTDCRRTIQLGYFGERFAGN-CG 396
Query: 318 NSCDACKHPNLLAKYLGE 335
N CD C++P L + E
Sbjct: 397 N-CDNCRYPKPLEDWTIE 413
>gi|332849065|ref|XP_003339348.1| PREDICTED: ATP-dependent DNA helicase Q5 [Pan troglodytes]
gi|332849067|ref|XP_003315779.1| PREDICTED: ATP-dependent DNA helicase Q5 [Pan troglodytes]
Length = 435
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 133/303 (43%), Positives = 191/303 (63%), Gaps = 10/303 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+ KP ++LY+TPE+ A+ F L + SR LL+ + +DEAHC+S WGHD
Sbjct: 109 RKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEAHCVSQWGHD 168
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y +L +LR+ L P +ALTATA P+VQ+DV +L L+ P+ + K+ R NLFY+
Sbjct: 169 FRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTPCFRANLFYD 228
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAA 174
V++K+L+ D Y +L LKA G C IVYC R C++L+ LS G++ A
Sbjct: 229 VQFKELISDPYGNLKDFCLKALGQEADKGLSGCGIVYCRTREACEQLAIELSCRGVNAKA 288
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL R+ V +DW+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQESG
Sbjct: 289 YHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESG 348
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD PS LYY +DR ++ F++ K +K Q + S K +I F +V +CE
Sbjct: 349 RAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK-LQVKRGNKASDKATIMAFDALVTFCE 407
Query: 295 GSG 297
G
Sbjct: 408 ELG 410
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 138/311 (44%), Positives = 189/311 (60%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L +R
Sbjct: 800 IQLLYVTPEMLAKSRAMESALLQLHSNKKLARIVIDEAHCVSQWGHDFRPDYTALGKMRE 859
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 860 RYTGVPVMALTATATPNVQVDVIHNLHMKGCDVFTQSFNRPNLTYEVRKKGRAQDALKDI 919
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 920 ADLITTDYSGKCGIIYCLSRKTCERVAMQLSSKFGVKTAHYHAGLSSKERFAVQRDWQSG 979
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ +VR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 980 RHTVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYHDS 1039
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++++KN+ +Q R+R + ++ F CE + CRR +IL F E+
Sbjct: 1040 VSINYMINKNKD-TTQEQKHRQRQMLRHVTQF------CENITDCRRVQILAYFDEKFKR 1092
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1093 EDCNRTCDNCK 1103
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 194/310 (62%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ L GI+ YHAG+ D+ RS +I Q
Sbjct: 228 QYIKGQKGS-GIVYCISRKTVDQVAEQLQKDGINALPYHAGMEDRERSQNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 194/308 (62%), Gaps = 14/308 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K IVYC+ R T D+++ L GI+ YHAG+ D+ RS+ +I Q
Sbjct: 228 QYIKGQ-KGAGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR ++L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSRVLGYFGESFAGN-CG 396
Query: 318 NSCDACKH 325
N CD C++
Sbjct: 397 N-CDNCRN 403
>gi|240960494|ref|XP_002400557.1| DNA helicase, putative [Ixodes scapularis]
gi|215490700|gb|EEC00343.1| DNA helicase, putative [Ixodes scapularis]
Length = 981
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 222/379 (58%), Gaps = 26/379 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S P RLLYVTPE AT GF LK +H G L AIDEAHC+S WGHD
Sbjct: 105 RDRVRSDLLSMSPETRLLYVTPEQVATEGFQGILKALHRIGKLARFAIDEAHCVSEWGHD 164
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y KL +R+ PDVP++ALTATA+ KV D++ L L+ P+ + K+S R NL+Y+
Sbjct: 165 FRPDYLKLGRVRDMFPDVPVVALTATASAKVFDDILVQLRLRQPVAIFKTSSFRANLYYD 224
Query: 123 VRYKDLLDDAYADLCS-VLKANG-----DTC-----AIVYCLERTTCDELSAYLSAGGIS 171
V +K+ L++ + +L LKA G + C IVYC R C+E+S L++ G+
Sbjct: 225 VEFKEALEEPFENLKGFALKALGADWDSEDCKRRGSGIVYCRTRDACEEVSLKLTSLGLL 284
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
YH G+ R +W R V+ ATV+FGMG+DR VR V H+++P+S+ A+YQ
Sbjct: 285 TKPYHGGMKPSEREENQAEWTEGRLPVIAATVSFGMGVDRAMVRFVAHWSVPQSVPAYYQ 344
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN--QSKNSQSFSTRERSSKKSISDFSQM 289
ESGRAGRD PS +YY DR+ + F++ ++ +++N++ ++ + F +M
Sbjct: 345 ESGRAGRDGRPSYCRIYYSRRDRKAITFLIQQDGKRARNNRGKV----VAEAAAKAFEKM 400
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDAC-KHPNL---LAKYLGELTSAVLQKNH 345
V++CEG+ CR + FG+ + C +CDAC K +L L+ + G L + +K
Sbjct: 401 VEFCEGTTCRHAVLCREFGDDL--DRCGKNCDACAKSKSLEARLSAFRGTLLTGKFEKTS 458
Query: 346 FSQIFISSQDMTDGGQYSE 364
S F S ++ GG++ +
Sbjct: 459 RSNGFDS--ELYGGGRHGQ 475
>gi|321476989|gb|EFX87948.1| DNA helicase RecQ5 [Daphnia pulex]
Length = 997
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 215/392 (54%), Gaps = 19/392 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K ++ DL + P+ +LLY+TPE AT F L +H ++ +DEAHC+S WGHD
Sbjct: 103 KRRVCNDLKTKCPNTQLLYITPEQAATSTFQEILAHLHKHKQISYFVVDEAHCVSQWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL LR D+P +ALTATA +V+KD+ E L L++P+ K+S R NLFY+
Sbjct: 163 FRPDYLKLGKLREKYMDIPCIALTATATAQVEKDIYEQLSLKSPVARFKTSCFRSNLFYD 222
Query: 123 VRYKDLLDDAYADLC----SVLKANGDT-------CAIVYCLERTTCDELSAYLSAGGIS 171
+ +++ D DL L + DT C I+YC R + L+ L+ GI
Sbjct: 223 IAFQNTSADPETDLSLYASEWLGDDWDTQPLKTRPCGIIYCRTRESTGTLAEILTKKGIH 282
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL D+ R+ V D+W++ + V+ AT++FGMG+D+ VR V H+ +P+S+ +YQ
Sbjct: 283 TKAYHAGLKDRERAEVQDEWMTGKIPVITATISFGMGVDKASVRFVAHWCMPQSVAGYYQ 342
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS ++Y +R +EF+L ++ SK ++ + E+ +K+ + + MV
Sbjct: 343 ESGRAGRDGQPSGCRIFYSRKERNAVEFLLKQDVSKKTKKGAKYEKQAKQMMKSYEAMVR 402
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
YCE CR FG+ P C+ CD C P S+ + K +F
Sbjct: 403 YCEIPQCRHAIFSSYFGDSPPD--CQKKCDFCLDPKATEDKTQAYFSSDVGKVPSLNLFD 460
Query: 352 SSQDMTDGG-----QYSEFWNRDDEASGSEED 378
D+ GG + ++++ + E G ++D
Sbjct: 461 DDSDLYGGGRRGQEKEADYYRKSKEEGGPKKD 492
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 194/308 (62%), Gaps = 14/308 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K IVYC+ R T D+++ L GI+ YHAG+ D+ RS+ +I Q
Sbjct: 228 QYIKGQ-KGAGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR ++L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSRVLGYFGESFAGN-CG 396
Query: 318 NSCDACKH 325
N CD C++
Sbjct: 397 N-CDNCRN 403
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 194/310 (62%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K IVYC+ R T D+++ L GI+ YHAG+ D+ RS+ +I Q
Sbjct: 228 QYIKGQ-KGAGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFSGN-CA 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 194/310 (62%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ L GI YHAG++D+ RS +I Q
Sbjct: 228 QYIKGQKGS-GIVYCISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFSGN-CG 396
Query: 318 NSCDACKHPN 327
N CD C++ N
Sbjct: 397 N-CDNCRNGN 405
>gi|256419821|ref|YP_003120474.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
gi|256034729|gb|ACU58273.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
Length = 733
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 196/326 (60%), Gaps = 18/326 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+K K+ DL SGK ++LYV PE + +++ ++ +A+DEAHCIS WG
Sbjct: 101 QIK-KVRTDLLSGKT--KMLYVAPETLTKQENLDFFRELE----ISFIAVDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
HDFRP YR+L + + D +PI+ALTATA PKVQ D++++L L++P V SSFNR NL+
Sbjct: 154 HDFRPEYRRLKEMIEQINDSLPIIALTATATPKVQSDIVKNLELRDPQVFLSSFNRSNLY 213
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YE+R K D ++ + + I+Y L R T +EL+ L A I AYHAGL+
Sbjct: 214 YEIRPKRKKDQTIREIVKFIHQHKGKSGIIYTLNRKTTEELADMLVANNIKAVAYHAGLD 273
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
R+ D ++ V+VAT+AFGMGID+ DVR V H+NIPKS+E +YQE+GRAGRD
Sbjct: 274 AGTRAQRQDMFLHEDVDVIVATIAFGMGIDKPDVRFVIHYNIPKSLENYYQETGRAGRDG 333
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
L + +Y D +++E ++ + S RE ++ ++ V Y E S CRR
Sbjct: 334 LEGICVCFYSYKDVQKLEHLM------RDKPLSEREMGAQL----INETVAYAESSACRR 383
Query: 301 KKILESFGEQIPVSLCKNSCDACKHP 326
K IL FGE+ S C N+CD C++P
Sbjct: 384 KVILHYFGEKYEESQCNNACDNCRNP 409
>gi|167535712|ref|XP_001749529.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771921|gb|EDQ85580.1| predicted protein [Monosiga brevicollis MX1]
Length = 2199
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 186/326 (57%), Gaps = 23/326 (7%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
LLY+TPE + + +H+RGLL IDEAHC+S WGHDFRP Y++L +R + P
Sbjct: 704 LLYITPERLKSSMMRQTFESLHARGLLARFVIDEAHCVSQWGHDFRPDYKELQIVRQWFP 763
Query: 80 DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 139
VP++ALTATA P+V++DV+ L +Q + +SSFNR NLFYEVR K +AD+ ++
Sbjct: 764 RVPLMALTATATPRVKEDVLNILGMQRAVTFQSSFNRTNLFYEVRPKK--KSLFADIAAI 821
Query: 140 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVV 199
+ N + IVYC+ R + + L GI AYHAGL+ RS V D W SR ++
Sbjct: 822 VAKNRGSSGIVYCMSRRDAETTALDLQRRGIKALAYHAGLDPGLRSEVQDVWARSRADII 881
Query: 200 VATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEF 259
AT+AFGMGID+ DVR V H +PKSME +YQE+GRAGRD P++ +L+Y D+ R EF
Sbjct: 882 CATIAFGMGIDKPDVRYVIHATLPKSMEGYYQEAGRAGRDGQPAQCILFYTFADKARHEF 941
Query: 260 ILSKNQSKNSQSFSTRERSSKKSIS-------------------DFSQMVDYCEG--SGC 298
+++K+ Q R S + + + + G S C
Sbjct: 942 MINKSDGDWRQREQHRFFLSLSLSLSLSLLLFFFLSCFVVEVQIEVALTLHFALGIISNC 1001
Query: 299 RRKKILESFGEQIPVSLCKNSCDACK 324
RRK+ L F EQ C ++CD CK
Sbjct: 1002 RRKQQLAYFDEQFDARDCNDNCDVCK 1027
>gi|354489423|ref|XP_003506862.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Cricetulus griseus]
Length = 411
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 192/307 (62%), Gaps = 11/307 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 106 VQERKQLLSDLERDKPRTKLLYITPEMAASASFQPTLNSLMSRNLLSYLVVDEAHCVSQW 165
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNL 119
GHDFRP Y +L +LR+ L P +ALTATA P+VQ+DV SL L+ P+ K+ R NL
Sbjct: 166 GHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFASLHLKQPVASFKTPCFRANL 225
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGI 170
FY+V++K+L+ D Y +L LKA G C IVYC R C++++ LS+ G+
Sbjct: 226 FYDVQFKELIPDLYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQVAVELSSRGV 285
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
+ AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +Y
Sbjct: 286 NAKAYHAGLKAPDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYY 345
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD PS LYY DR ++ F++ K K + ++ S K ++ F +V
Sbjct: 346 QESGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEIDKLQEKRGSKP-SDKATLLAFDALV 404
Query: 291 DYCEGSG 297
+CE G
Sbjct: 405 TFCEELG 411
>gi|434406622|ref|YP_007149507.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
gi|428260877|gb|AFZ26827.1| ATP-dependent DNA helicase RecQ [Cylindrospermum stagnale PCC 7417]
Length = 723
Score = 263 bits (673), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 137/318 (43%), Positives = 196/318 (61%), Gaps = 16/318 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E L GK ++LLYV PE + F+ L + + ++ AIDEAHC+S WGHDFRP Y
Sbjct: 103 EALLQGK--IKLLYVAPERLLSERFLPLLDLVKEKIGISTFAIDEAHCVSEWGHDFRPEY 160
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R++ SLR PDVP LALTATA +V+ D+++ L L+ P + +SFNR NL+YEVR K
Sbjct: 161 RQMKSLRKRYPDVPTLALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEVRTKT- 219
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
AYA+L +++ N + I+YCL R DEL+ L IS +YHAGL D RS
Sbjct: 220 -KTAYAELLGIIRENQGS-GIIYCLTRKKVDELTLKLQHDKISVLSYHAGLTDDERSKNQ 277
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+I +V+VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD PS+ L+
Sbjct: 278 TRFIRDDVRVMVATIAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRDDEPSRCTLF 337
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D + +E+ +++ Q S ++ Q++DY EG+ CRR L FG
Sbjct: 338 FSFSDIKTIEWSINQKTDPQEQLISKQQ---------LRQVIDYAEGTDCRRTIQLGYFG 388
Query: 309 EQIPVSLCKNSCDACKHP 326
E+ P + C N CD C +P
Sbjct: 389 ERFPGN-CGN-CDNCLYP 404
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 137/311 (44%), Positives = 190/311 (61%), Gaps = 11/311 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ A M S L ++HS L + IDEAHC+S WGHDFRP Y L ++R
Sbjct: 804 IQLLYVTPEMLAKSRAMESVLLQLHSNDKLARIVIDEAHCVSQWGHDFRPDYTALGTMRE 863
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
VP++ALTATA P VQ DV+ +L ++ V SFNRPNL YEVR K DA D+
Sbjct: 864 KYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQDALKDI 923
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
++ + + C I+YCL R TC+ ++ LS+ G+ A YHAGL+ K R +V DW S
Sbjct: 924 ADLITNDYPEKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSG 983
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H +IP+S+E +YQE+GRAGRD S+ LYY D
Sbjct: 984 KHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDS 1043
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +++ KN+ + + R+R + ++ F CE + CRR +IL F E+
Sbjct: 1044 TSIGYMIKKNK-ETTHEQKQRQRQMLRHVTQF------CENITDCRRAQILAYFDEKFKR 1096
Query: 314 SLCKNSCDACK 324
C +CD CK
Sbjct: 1097 EDCNRTCDNCK 1107
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 189/316 (59%), Gaps = 14/316 (4%)
Query: 19 RLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++ YVTPEL A G F L + RG L IDEAHC+S WGHDFRP Y++L S+R
Sbjct: 331 KIFYVTPELIAKSGHFHDVLSGLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRAR 390
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPI+ALTATA KV+ D++E+L ++ K SFNR NL YEVR K D+
Sbjct: 391 YPSVPIIALTATATQKVEMDILENLGIRGCETFKMSFNRSNLRYEVRAK--TSTVELDIA 448
Query: 138 SVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
S ++ + D C I+YC + C+ +S L + A YHAGL+ R+SV + W
Sbjct: 449 SFVQTHFPDCCGIIYCTSKKECEMISEKLGKY-MGTAFYHAGLSKNERNSVQEKWNRGEF 507
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+V+VAT+AFGMGID+KDVR V H+ IPKS+E +YQE+GRAGRD L S +L+Y D+++
Sbjct: 508 KVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKK 567
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSL 315
+ F++ K Q RE D ++ +CE + CRR ++L FGE+ +
Sbjct: 568 ISFMIEKGDGGYEQKQRQRE--------DLEAVIQFCENKTDCRRMQVLAHFGERFDPQM 619
Query: 316 CKNSCDACKHPNLLAK 331
C+ +CD C+ ++ K
Sbjct: 620 CRKTCDNCRREGVVKK 635
>gi|344248551|gb|EGW04655.1| ATP-dependent DNA helicase Q5 [Cricetulus griseus]
Length = 409
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 192/307 (62%), Gaps = 11/307 (3%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S W
Sbjct: 89 VQERKQLLSDLERDKPRTKLLYITPEMAASASFQPTLNSLMSRNLLSYLVVDEAHCVSQW 148
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNL 119
GHDFRP Y +L +LR+ L P +ALTATA P+VQ+DV SL L+ P+ K+ R NL
Sbjct: 149 GHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFASLHLKQPVASFKTPCFRANL 208
Query: 120 FYEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGI 170
FY+V++K+L+ D Y +L LKA G C IVYC R C++++ LS+ G+
Sbjct: 209 FYDVQFKELIPDLYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQVAVELSSRGV 268
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
+ AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +Y
Sbjct: 269 NAKAYHAGLKAPDRTQVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYY 328
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD PS LYY DR ++ F++ K K + ++ S K ++ F +V
Sbjct: 329 QESGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEIDKLQEKRGSKP-SDKATLLAFDALV 387
Query: 291 DYCEGSG 297
+CE G
Sbjct: 388 TFCEELG 394
>gi|397564928|gb|EJK44405.1| hypothetical protein THAOC_37057 [Thalassiosira oceanica]
Length = 746
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/380 (38%), Positives = 217/380 (57%), Gaps = 29/380 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY TPEL T F + L K+H L + A+DEAHC+S+WGHDFR SYRKL+ LR
Sbjct: 211 IKLLYCTPELIETERFRAILIKLHRMKRLQMFAVDEAHCLSTWGHDFRKSYRKLTWLRQT 270
Query: 78 LPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFYEVRYKDLLD----- 130
P VP+LA T TA KV D+ + L L ++ +L SFNRPN+ YEVR+KD L+
Sbjct: 271 FPSVPVLAATGTATAKVIDDIRDVLKLDRRSCQLLMGSFNRPNISYEVRFKDSLNAKKSK 330
Query: 131 DAYADLCSVLKANGDTC-----AIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
A DL +++ + I+Y +R C+ ++ + ISC AYHAGL D R+
Sbjct: 331 GALLDLIGEVRSQHEGAKEPRSGIIYVHKREDCEAIAKEIRTTEISCLAYHAGLKDAERA 390
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
W QVVVATVAFGMG+D VR V H+ + KS+E FYQESGR GRD +KS
Sbjct: 391 ETQKKWTEGTCQVVVATVAFGMGVDLPHVRYVIHWTMAKSLEGFYQESGRGGRDGREAKS 450
Query: 246 LLYYGMDDRRRMEFILSKN-QSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
++Y+ DD F++ KN + K S+ + ++ + + M YC+ +GC+R+ +L
Sbjct: 451 IVYFSKDDASLFAFLVKKNAERKASKEGAGVQQQRADQLVEIESMARYCQIAGCKRQFVL 510
Query: 305 ESFGEQI-PVSLCKNSCDACKHPNLLAKYL--GELTSAVLQKNHFSQIFISSQDMTDGGQ 361
FGE I ++CK +CD C++P +++ + E SAV + S+ M+ +
Sbjct: 511 AHFGETIDAATVCKKTCDYCRNPGKVSREIQASECMSAV----------VGSRKMSSQQK 560
Query: 362 YSEFWNR---DDEASGSEED 378
++ + D++ G++ED
Sbjct: 561 EKKYHHNPLDDEDEKGADED 580
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 191/327 (58%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L +PSL+LLYVTPE ++A+ F + L ++ RGLL IDEAHC+S WGHDFR
Sbjct: 722 IYRELSKKEPSLKLLYVTPEKISASQKFCNLLTTLYERGLLARFVIDEAHCVSQWGHDFR 781
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y+KL+ LR P VP++ALTATA P+V+ D++ L L P SSFNRPNL Y +
Sbjct: 782 PDYKKLNRLRENYPKVPVIALTATATPRVRTDILHQLGLSVPKWFMSSFNRPNLRYSIIA 841
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A L K + C IVYCL R CD+ + + GI +YHAG D
Sbjct: 842 KKGKNCSDEVIAMLKMKYK---NECGIVYCLSRKDCDDYAMQMRKNGIKALSYHAGHTDS 898
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
+R+ + WIS +VV AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 899 SRTDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGEN 958
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +L+Y D R+ ++ + + +K I + +MV +CE + CRR
Sbjct: 959 ADCILFYNYADMHRIRKMIELDNPNPT--------VTKTHIDNLYKMVSFCENKTDCRRA 1010
Query: 302 KILESFGEQIPVSLC----KNSCDACK 324
+ L FGE C SCD C+
Sbjct: 1011 QQLHYFGEMFDRQQCIANKATSCDNCR 1037
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 193/308 (62%), Gaps = 14/308 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHTASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + IVYC+ R T D+++ L GI YHAG++D+ RS +I Q
Sbjct: 228 QYIKGQKGS-GIVYCISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGTECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKH 325
N CD C++
Sbjct: 397 N-CDNCRN 403
>gi|324502133|gb|ADY40940.1| ATP-dependent DNA helicase Q5 [Ascaris suum]
Length = 662
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/425 (35%), Positives = 226/425 (53%), Gaps = 69/425 (16%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ I EDL + P +R+LY+TPE ATP + ++ RGLLN + +DEAHC++ WGHD
Sbjct: 198 RASIIEDLRAASPQIRMLYITPESAATPNIQRLISNLNKRGLLNYLVVDEAHCVTHWGHD 257
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y KL +LR+ P+V +ALTATA PK Q+D+++ L L N + K+S R NL Y+V
Sbjct: 258 FRPDYLKLGNLRSLAPEVRWIALTATANPKAQEDILKQLRLSNVRIFKASTFRANLHYDV 317
Query: 124 RYKDLL---------------------------DDAYADLCS--------------VLKA 142
KDL+ D D+CS V
Sbjct: 318 ILKDLIECVPERHLALFMMKALSRIEKKHNDTKDSTIVDVCSPSTSADKRESHGQRVFTG 377
Query: 143 NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVAT 202
+G IVYC R C +++ L+ G+ AYHAGL++K R SV + W+ + V+ AT
Sbjct: 378 SG----IVYCRTREECGKMAMRLTEEGVPACAYHAGLSNKVRDSVQEKWMKNEIPVLAAT 433
Query: 203 VAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILS 262
++FGMGID+ DVR+V H+ +++ A+YQESGRAGRD S +YY DDR+ + F+++
Sbjct: 434 ISFGMGIDKADVRVVVHWTASQNLAAYYQESGRAGRDGKRSFCRIYYSRDDRQLLNFLIN 493
Query: 263 KNQSKNSQSFSTRERSSKKSISD---------FSQMVDYCEGSGCRRKKILESFGEQIPV 313
++ K TR + K + D F +M+++CE GCR + FG++
Sbjct: 494 QDIRK------TRAKKIDKKLIDEQIKAAQHGFEKMIEFCEKPGCRHVAFAKYFGDE-DT 546
Query: 314 SLCKNSCDACKHP----NLLAKYLGELTSAVLQKNHFSQIFISSQD--MTDGGQYS--EF 365
C+ SCD CK P + +A++ E + + + I+ D + +GG+ + E
Sbjct: 547 RPCRVSCDYCKDPKACEDAIARFSEESWKTAISSGYRKRGHINDDDSFLYEGGKRAQNEH 606
Query: 366 WNRDD 370
W+ DD
Sbjct: 607 WDADD 611
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 189/316 (59%), Gaps = 14/316 (4%)
Query: 19 RLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++ YVTPEL A G F L + RG L IDEAHC+S WGHDFRP Y++L S+R
Sbjct: 331 KIFYVTPELIAKSGHFHDVLSGLVCRGRLKRFVIDEAHCVSQWGHDFRPDYKELGSMRAR 390
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPI+ALTATA KV+ D++E+L ++ K SFNR NL YEVR K D+
Sbjct: 391 YPSVPIIALTATATQKVEMDILENLGIRGCETFKMSFNRSNLRYEVRAK--TSTVELDIA 448
Query: 138 SVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
S ++ + D C I+YC + C+ +S L + A YHAGL+ R+SV + W
Sbjct: 449 SFVQTHFPDCCGIIYCTSKKECEMISEKLRKY-MGTAFYHAGLSKNERNSVQEKWNRGEF 507
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+V+VAT+AFGMGID+KDVR V H+ IPKS+E +YQE+GRAGRD L S +L+Y D+++
Sbjct: 508 KVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGRDGLESVCVLFYTYGDKKK 567
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSL 315
+ F++ K Q RE D ++ +CE + CRR ++L FGE+ +
Sbjct: 568 ISFMIEKGDGGYEQKQRQRE--------DLEAVIQFCENKTDCRRMQVLAHFGERFDPQM 619
Query: 316 CKNSCDACKHPNLLAK 331
C+ +CD C+ ++ K
Sbjct: 620 CRKTCDNCRREGVVKK 635
>gi|428184941|gb|EKX53795.1| hypothetical protein GUITHDRAFT_52059, partial [Guillardia theta
CCMP2712]
Length = 340
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/238 (51%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYVTPE + L +++ + L+L AIDEAHCISSWGHDFRP++RKLS L+ +
Sbjct: 103 IKLLYVTPEALSGSTLFPYLNRLNEQNKLSLFAIDEAHCISSWGHDFRPAFRKLSILKRF 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDA--YAD 135
VP++ALTATA +V+ D+ +L L NP L ++FNRPN+ YEVR+K+ + D+ D
Sbjct: 163 YSKVPVIALTATATKRVRDDIASTLMLNNPEFLIATFNRPNITYEVRFKEQVPDSDVQGD 222
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ L C I+YC +RT C E++ YL G S AYHAGL + RS +L +W +
Sbjct: 223 IARFLSKMKGQCGIIYCFKRTECSEIAMYLKGKGFSIEAYHAGLKNDERSEILQNWTEGK 282
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+V ATVAFGMGID+ DVR V H +PKSME+FYQESGRAGRD PS S+LYY DD
Sbjct: 283 IHIVAATVAFGMGIDKADVRFVIHQTMPKSMESFYQESGRAGRDGKPSVSVLYYSEDD 340
>gi|196013025|ref|XP_002116374.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
gi|190580965|gb|EDV21044.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
Length = 752
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 210/352 (59%), Gaps = 38/352 (10%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 59
M+ ++Y++L PS+ LLY+TPE L+A+ +S L+ +H R +L+ IDEAHCIS
Sbjct: 158 MKENNEMYQELYKRIPSISLLYLTPEKLSASSKLLSVLRSLHLRKMLSRFVIDEAHCISQ 217
Query: 60 --------------------WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVM 99
WGHDFRP Y+KLS++R P VP++ALTATA P+V+KD++
Sbjct: 218 VTTYASCSLCIYNISCTYLQWGHDFRPDYKKLSAIRENFPGVPVMALTATATPRVRKDIL 277
Query: 100 ESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTC 158
L + NP+ SFNRPNL Y V K+ ++ ++ + + IVYCL R C
Sbjct: 278 NQLKVPNPIWFVQSFNRPNLQYSVLPKNKC--TAQEIIKIVNSQFRNESGIVYCLSRNEC 335
Query: 159 DELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS-SRKQVVVATVAFGMGIDRKDVRLV 217
D +S+ L GI+ +YHAGL+ K R++V WI+ +R ++V AT+AFGMGID+ DVR V
Sbjct: 336 DRVSSTLREAGIAALSYHAGLDAKERTNVQKRWITENRCKIVCATIAFGMGIDKADVRFV 395
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRER 277
H+++PKS E +YQESGRAGRD + +K +L+Y D R+ +++ + +N +
Sbjct: 396 IHYSLPKSTEGYYQESGRAGRDGMLAKCILFYTYGDACRIRRMINSERDQN-------QE 448
Query: 278 SSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQ-IPVSLCKN----SCDAC 323
+ + + + +MV YCE S CRR ++LE FGE C+N SCD C
Sbjct: 449 TKRVHLDNLYRMVQYCENVSDCRRVQLLEYFGESTFKRETCRNNRATSCDNC 500
>gi|113476788|ref|YP_722849.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
gi|110167836|gb|ABG52376.1| ATP-dependent DNA helicase RecQ [Trichodesmium erythraeum IMS101]
Length = 731
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 206/346 (59%), Gaps = 18/346 (5%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ GK ++LLYV PE + F+ L+ I S+ ++ AIDEAHC+S WGHDFRP YR
Sbjct: 111 DIILGK--IKLLYVAPERLLSEKFLEFLELISSQQGISTFAIDEAHCVSEWGHDFRPEYR 168
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+L LR PDVPI+ALTATA +V++D+ L LQ P + +SF R NL+YEVR K
Sbjct: 169 QLKLLRETYPDVPIMALTATATKRVREDITTQLNLQKPYIHIASFFRSNLYYEVRQKTSA 228
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+ +A++ +++ G + IVYC R DE++ L +S AYHAG+ D+ R++
Sbjct: 229 KNTFAEILQIIRTIGGS-GIVYCNSRKRVDEIAYKLRQNNVSALAYHAGMTDEERTTNQT 287
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I V+VATVAFGMGID+ DVR V H+++ K++E +YQE+GR+GRD P++ +L++
Sbjct: 288 KFIRDDVDVIVATVAFGMGIDKPDVRFVIHYDLSKNIEGYYQETGRSGRDGEPAQCILFF 347
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D+R +E+++ + + Q + ++ ++++Y E + CR + +L FGE
Sbjct: 348 SYGDKRSIEYLIGQKVDEQEQRIAEQQ---------LRRIINYAEATECRHRVLLSYFGE 398
Query: 310 QIPVSLCKNSCDACKHPNLLAKYLGE----LTSAVLQKNHFSQIFI 351
P + C N CD CK+P + + E L+ K F +I
Sbjct: 399 DFPGN-CGN-CDNCKYPKPIEDWTIEAMKFLSCVARTKERFGMTYI 442
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 193/308 (62%), Gaps = 14/308 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +P F+ L I + L +A+DEAHC+S WGHDFRP YR++ +R
Sbjct: 110 IKLLYVAPERLLSPSFLDFLAVIDNYLGLACLAVDEAHCVSDWGHDFRPEYRQIKQVRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPILALTATA +V++D+++ L L++ + +SFNRPNL+YEV+ K +Y L
Sbjct: 170 FPSVPILALTATATQQVREDIIQQLGLRDTSIHIASFNRPNLYYEVQPKT--SKSYQQLY 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K IVYC+ R T D+++ L GI+ YHAG+ D+ RS+ +I Q
Sbjct: 228 QYIKGQ-KGAGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+K L++ D R++
Sbjct: 287 IMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +++ +N Q +K+ Q++DY EG+ CRR +L FGE + C
Sbjct: 347 EYFINQKTEQNEQ---------QKARQQLRQVLDYAEGNECRRSSVLGYFGESFAGN-CG 396
Query: 318 NSCDACKH 325
N CD C++
Sbjct: 397 N-CDNCRN 403
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 198/330 (60%), Gaps = 24/330 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY DL S P+++LLYVTPE + G +S + +H RGLL IDEAHC+S WGHDF
Sbjct: 319 EIYSDLSSENPTIKLLYVTPEKISASGRLSSVFYTLHRRGLLARFVIDEAHCVSQWGHDF 378
Query: 65 RPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
RP Y KL++LR P VPI+ALTATA PK+ D + L +Q+ + SSF R NL Y
Sbjct: 379 RPDYTKLNTLREKYNNPPVPIIALTATATPKIVTDARDHLKMQDSKLFISSFVRDNLKY- 437
Query: 123 VRYKDLLDDAYADLCSVLKANGD----TCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
DL+ A L +V++ IVYCL R C+ + L+ G+S YHAG
Sbjct: 438 ----DLIPKAAKSLVNVVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAG 493
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
LND R SV W++++ V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGR
Sbjct: 494 LNDNLRVSVQKSWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGR 553
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SG 297
D +PS L+ Y D R+ ++ + + +T RS +++ Q+V YCE S
Sbjct: 554 DGMPSYCLMLYSYHDSIRLRRMIEEGNT------TTGVRSMH--LNNVLQVVAYCENVSV 605
Query: 298 CRRKKILESFGEQIPVSLCKNS---CDACK 324
CRRK ++E FGE C+NS CD C+
Sbjct: 606 CRRKMLVEHFGEVYDEQSCRNSKTPCDICE 635
>gi|321478461|gb|EFX89418.1| DNA helicase bloom's syndrome protein A [Daphnia pulex]
Length = 1276
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/324 (43%), Positives = 193/324 (59%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLY+TPE L+A+ ++ L ++ R LL +DEAHC+S WGHDFR
Sbjct: 596 IYARLSMRNPDIKLLYITPEKLSASMKLLNALNALNGRQLLARFVVDEAHCVSQWGHDFR 655
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KLS L+ P VP +ALTATA P+V+ D++ L ++NP SSFNRPNL Y V
Sbjct: 656 PDYKKLSVLKEKFPTVPTMALTATATPRVRFDILRQLNMRNPKWFLSSFNRPNLKYCVLP 715
Query: 126 KDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + ++ ++ D IVYCL R CDE++ L + I +YHAGL+D+ R
Sbjct: 716 KKMKAGVLTEIAELITKRFDRKSGIVYCLSRRECDEVAQSLQSSRIKAISYHAGLSDELR 775
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S WI+ QVV AT+AFGMGID+ DVR V HF++PKS+E +YQESGRAGRD S+
Sbjct: 776 SESQLKWINGTVQVVCATIAFGMGIDKPDVRFVIHFSLPKSIEGYYQESGRAGRDGELSQ 835
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LYY D RM ++ ++ ++F+ R+ I + +MV +CE + CRR
Sbjct: 836 CYLYYSYKDVLRMRRMIEMDR----ENFAARQ----THIDNLWRMVAFCENKTDCRRSLQ 887
Query: 304 LESFGEQIPVSLCKNS----CDAC 323
L FGE CK++ CD C
Sbjct: 888 LGYFGEHFDSQTCKSNTKSVCDNC 911
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 192/325 (59%), Gaps = 13/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y +L +PSL+LLY+TPE ++A+ L+ ++ RG+L IDEAHC+S WGHDFR
Sbjct: 760 VYRELAKKEPSLKLLYLTPEKISASQKIGDALRALYERGMLARFVIDEAHCVSQWGHDFR 819
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P VP +ALTATA P+V+ D++ L + NP SSFNRPNL Y V
Sbjct: 820 PDYKKLQLLRKNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLHYVVTS 879
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + + + + + C IVYCL R CD + + + GI +YHAGL+D R
Sbjct: 880 KKGKNSTEEIIEMIKRDFRNDCGIVYCLSRKDCDSFADTMKSNGIKALSYHAGLSDHQRL 939
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ WIS + +VV AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD ++
Sbjct: 940 EIQGRWISEQIKVVCATIAFGMGIDKPNVRFVIHATLPKSIEGYYQESGRAGRDGENAEC 999
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKIL 304
+L+Y D R ++ + + N + + K + + ++V +CE + CRR L
Sbjct: 1000 ILFYHYGDMMRHRKMIEGDSTSNWE-------AQKTHMDNLFKIVAFCENKTDCRRGLQL 1052
Query: 305 ESFGEQIPVSLC----KNSCDACKH 325
FGE S+C + +CD C++
Sbjct: 1053 NYFGEMFDRSICIARKQTTCDNCRN 1077
>gi|409098551|ref|ZP_11218575.1| ATP-dependent DNA helicase RecQ [Pedobacter agri PB92]
Length = 729
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 201/359 (55%), Gaps = 31/359 (8%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ DL SG+ +LLYV PE A + L I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TQVKSDLLSGQT--KLLYVAPESLAKQDNIEFLNLIK----ISFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + L + +PI+ALTATA PKVQ+D+M++L + + KSSFNRPNLFYE+
Sbjct: 156 RPEYRKIKQVIAGLGNNIPIIALTATATPKVQQDIMKNLGMTEATLFKSSFNRPNLFYEI 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K D ++ +K+N I+YCL R +E++ L+ GIS YHAGL K
Sbjct: 216 RPKR---DITKEIIKYIKSNPGKSGIIYCLSRKKVEEVAEALNLNGISALPYHAGLEPKV 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H ++PKSME +YQE+GRAGRD
Sbjct: 273 RAETQDKFLMEDAEVIVATIAFGMGIDKPDVRFVIHHDVPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E CRRK+I
Sbjct: 333 VCIAFYAQKDVDKL--------AKFMKDKPVSEREIGTQI--LKEVIDYAESGVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACKHP----------NLLAKYLGELTSAVLQKNHFSQIFIS 352
L FGE + C CD CK P ++L K++ E T H +F+
Sbjct: 383 LHYFGENFNETGCNCMCDNCKKPKKQFDAEEQLSILLKFI-EKTGEKFDDTHLLNVFLG 440
>gi|403418217|emb|CCM04917.1| predicted protein [Fibroporia radiculosa]
Length = 842
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 208/392 (53%), Gaps = 37/392 (9%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I EDL+SG P +RLLYV+PE TP F L ++ R LN + +DEAHCIS WGHDFR
Sbjct: 136 ILEDLNSGHPEIRLLYVSPEKFCTPEFNKLLGRLDERAQLNRLVVDEAHCISEWGHDFRE 195
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK--SSFNRPNLFYEVR 124
YR+L S R+ P +PI+ALTATA P VQ+D++ SL + + K FNR NLFYEVR
Sbjct: 196 EYRRLGSFRDRFPYIPIMALTATATPVVQEDIVRSLHMPRERLFKVVHPFNRANLFYEVR 255
Query: 125 YKDLLDDAYADLCSVL--------KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y D A A + + + + I+YC R TCD L+ YL G++ YH
Sbjct: 256 YLSSADPA-AHMVDIFDYISNLHHRRGRPSSGIIYCRTRATCDNLAHYLRGKGLNARPYH 314
Query: 177 AGLNDKARSSVLDDWISSRK-----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
G+ L +W VV AT+AFGMGID+ DVR + H+++PKS E +YQ
Sbjct: 315 RGIGSIVLDRTLAEWERGGSGQGGIDVVCATIAFGMGIDKADVRYILHYDLPKSFEGYYQ 374
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRE--RSSKKSISDFSQM 289
E+GR GRD LPSK +L+Y +D R+ +S + +K + + E S++++ + +
Sbjct: 375 ETGRGGRDGLPSKCILFYSREDVIRVRNWVSGSHAKRLERAESLEGPMPSQRAVDSLTAL 434
Query: 290 VDYCEGSG-CRRKKILESFGEQIPVS-------LCKNSCDACKHPNLLAKYLGELTSAVL 341
+++ EG CR I FGE I + C CD CK P+ + +L+ L
Sbjct: 435 INFAEGVNVCRHITICRYFGEHIDTNSPEVAKGYCDGMCDVCKSPDKTKRRKSDLSPEAL 494
Query: 342 QKNHFSQIFISSQDMTDGGQYSEFWNRDDEAS 373
+ + + Q N+DDE S
Sbjct: 495 VSSQIAVL-----------QRQAGSNKDDEGS 515
>gi|432104137|gb|ELK30964.1| ATP-dependent DNA helicase Q5 [Myotis davidii]
Length = 410
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/306 (43%), Positives = 189/306 (61%), Gaps = 11/306 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 106 QEKKELLSDLEQEKPRTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 165
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA P+V++DV +L L+ P+ K+ R NLF
Sbjct: 166 HDFRPDYLRLGALRSRLAHAPCVALTATATPQVREDVFAALHLKQPVAAFKTPCFRANLF 225
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGIS 171
Y+V++K+LL D Y +L LKA G C I+YC R C++L+ L G+S
Sbjct: 226 YDVQFKELLSDPYGNLRDFCLKALGQKAGKGVLSGCGIIYCRTREACEQLAIELGYRGLS 285
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V ++W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQ
Sbjct: 286 AKAYHAGLKASERTLVQNEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQ 345
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD PS LYY DR ++ F++ K +K + + S K ++ F +V
Sbjct: 346 ESGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKA-SDKAALQAFEALVT 404
Query: 292 YCEGSG 297
+CE G
Sbjct: 405 FCEELG 410
>gi|411116551|ref|ZP_11389038.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
gi|410712654|gb|EKQ70155.1| ATP-dependent DNA helicase RecQ [Oscillatoriales cyanobacterium
JSC-12]
Length = 741
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 192/309 (62%), Gaps = 9/309 (2%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++L+Y+ PE G +L S+ + +AIDEAHC+S WGHDFRP YR+LS LR +
Sbjct: 117 MKLVYIAPERLLNEG---RLAGWLSQVYVAAIAIDEAHCVSEWGHDFRPEYRQLSQLRQW 173
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+VPI+ALTATA +V+ D++E L LQ+P++ S+FNRPNL+YEVR K +Y +L
Sbjct: 174 FANVPIMALTATATERVRYDIIEQLNLQDPVLHVSTFNRPNLYYEVRPKH--KQSYRELL 231
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ I+YCL R DEL+ L GIS YHAG++++ RS +I Q
Sbjct: 232 QLIRQQAGASGIIYCLSRKRVDELTTKLQRDGISALPYHAGMDNQLRSENQSRFIRDNVQ 291
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P++ L++ M D + +
Sbjct: 292 VMVATIAFGMGINKPDVRFVVHYDLPRNIEGYYQESGRAGRDGEPARCTLFFSMGDVKTV 351
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
EF++S+ N+ E + + ++++Y E + CRR L FGE + C
Sbjct: 352 EFLISQKVDPNTG--EPLEDEQRIATQQLRRVINYAEATECRRIIQLGYFGETFSGN-CG 408
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 409 N-CDNCLQP 416
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS 8797]
Length = 1373
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 212/360 (58%), Gaps = 25/360 (6%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ ++K+H G L V IDEAHC+S+WGHDFRP Y++L +
Sbjct: 716 LDLIYISPEMISASEQCKKAIRKLHEDGNLARVVIDEAHCVSNWGHDFRPDYKELKIFKR 775
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+NP+ LK SFNR NLFYEV+ K + ++
Sbjct: 776 EFPDIPMMALTATASEQVRMDIIHNLELKNPVFLKQSFNRTNLFYEVKKKS--KNTIYEI 833
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K + I+YC + +C++ + L I CA YHAGL + R + W +
Sbjct: 834 CDEIKRKFRNQTGIIYCHSKNSCEQTATQLQRNRIKCAYYHAGLEPEERFKIQKSWQTDE 893
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF IP+++E +YQE+GRAGRD S Y+ D R
Sbjct: 894 IQVICATVAFGMGIDKPDVRFVYHFTIPRTLEGYYQETGRAGRDGKYSYCTTYFSFRDIR 953
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E +
Sbjct: 954 NMQTMIQKDENLDRE-------NKEKHLAKLQQVLGYCDNMTDCRRKLVLSYFNEDFDAA 1006
Query: 315 LCKNSCDACKHPN----------LLAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQYSE 364
LC +CD CK+ +++++GEL ++ N I QD+ G + S+
Sbjct: 1007 LCHKNCDNCKNRQSSQTEERDMTEISRHIGELMESL---NGSRVTLIQCQDIFKGSRSSK 1063
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 183/309 (59%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++LY+ PE A G +S + K ++L AIDE+HCIS WGHDFRP YRKLS L+
Sbjct: 104 IKILYMAPERLAMSGTLSMITKAK----VSLFAIDESHCISEWGHDFRPEYRKLSMLKKK 159
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPI+ALTATA PKV++D + L L NP +SFNR NL YE+R K + Y +
Sbjct: 160 FPKVPIIALTATATPKVREDTLNQLGLTNPKTYIASFNRSNLLYEIRPKK---ETYDQIL 216
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ N I+YC R D ++A L G + YHAGL+D R + +I +
Sbjct: 217 QYLRRNKGKGGIIYCQSRKNVDTVTAKLRKAGFNALPYHAGLSDTQRGRNQEAFIKDKAD 276
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGID+ +VR V H+++PK++E +YQE+GR GRD L + +L++ DR R+
Sbjct: 277 IIVATIAFGMGIDKPNVRFVIHYDLPKNLEGYYQETGRGGRDGLECECILFFSHGDRYRI 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ + + K + + ++ MV+YC + CRRK +L FGE++ C
Sbjct: 337 EYFVKQKGRKEERDIALKQ---------LQDMVNYCVSTTCRRKALLSYFGEELEEDNC- 386
Query: 318 NSCDACKHP 326
CDAC P
Sbjct: 387 GGCDACLRP 395
>gi|302689945|ref|XP_003034652.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
gi|300108347|gb|EFI99749.1| hypothetical protein SCHCODRAFT_15081 [Schizophyllum commune H4-8]
Length = 702
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 210/370 (56%), Gaps = 26/370 (7%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
VK + DL S +P RLLYV+PE T F + L+ +H G+LN + +DEAHCIS WGH
Sbjct: 155 VKNAVINDLRSARPKTRLLYVSPERFCTADFQAILEGLHDNGMLNRLVVDEAHCISQWGH 214
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS--SFNRPNLF 120
DFR YRKL R+ P+VPI+ALTATA P VQ D++ SL + + + K+ FNR NL+
Sbjct: 215 DFRAEYRKLGMFRDNFPEVPIMALTATATPAVQSDILRSLNMTDDRLFKALHPFNRANLY 274
Query: 121 YEVRYK----DLLDDAYADLCSVL--KANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
YEVRY + D Y DL S L + + IVYC R TCDEL+ +L G++
Sbjct: 275 YEVRYSCSATGQMKDIY-DLISRLHERRGRPSSGIVYCRRRDTCDELAEFLRKRGMNARP 333
Query: 175 YHAGLNDKARSSVLDDWISSRK-----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
YH G+ L +W + + VVVAT+AFG+GID+ DVR + H+++P S E +
Sbjct: 334 YHRGIKGPTLDKTLAEWTAGGQVEGDLHVVVATIAFGLGIDKPDVRYIIHYDLPTSFEGY 393
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN-QSKNSQSFSTRERSSKKSISDFSQ 288
YQE+GRAGRD PS+ +LYY +D + ++ + ++ S + S++S+ F +
Sbjct: 394 YQETGRAGRDGAPSRCILYYSREDAYNAKKLVQMSLANRASHVGANGPAPSQRSVDSFDE 453
Query: 289 MVDYC-EGSGCRRKKILESFGEQIPV-------SLCKNSCDACKHPN---LLAKYLGELT 337
+V + + CR I FGE I C CD CK+P+ LL + L + +
Sbjct: 454 LVTFAHKADTCRHVAICRYFGEHIDARDPAVVKQYCDKMCDVCKNPDKTRLLQQRLSDDS 513
Query: 338 SAVLQKNHFS 347
+A+ + + ++
Sbjct: 514 TALTRTSSWA 523
>gi|428201759|ref|YP_007080348.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
gi|427979191|gb|AFY76791.1| ATP-dependent DNA helicase RecQ [Pleurocapsa sp. PCC 7327]
Length = 708
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 192/310 (61%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F + L ++ + AIDEAHC+S WGHDFRP YR+L LR
Sbjct: 110 IKLLYVAPERLLSERFRNFLDLAATKISITAFAIDEAHCVSEWGHDFRPEYRQLIQLRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP+ ALTATA +VQ+D+++ L L+ P + +SFNRPN++YEV+ K+ +Y L
Sbjct: 170 YPHVPMFALTATATKRVQEDIIQQLGLRQPGIHLASFNRPNIYYEVQPKE--RRSYNQLL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + IVYCL R DE++ L GIS YHAG+ D+AR+ +I +
Sbjct: 228 KLIRTQQGS-GIVYCLSRRNVDEIAFRLQKDGISTVPYHAGITDEARTLNQTRFIRDDVK 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V H+++P+++E++YQESGRAGRD P+ L+ + D +R+
Sbjct: 287 VIVATIAFGMGIDKPDVRFVIHYDLPRNLESYYQESGRAGRDGEPANCTLFLSLGDFKRI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+I+ + Q + ++ Q+++Y EG+ CRR IL FGE+ P +
Sbjct: 347 EYIIDQKSDPQEQRIARQQ---------LRQVINYAEGTECRRTIILRYFGERFPGNCA- 396
Query: 318 NSCDACKHPN 327
SCD C++P
Sbjct: 397 -SCDNCRNPK 405
>gi|427717685|ref|YP_007065679.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
gi|427350121|gb|AFY32845.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 7507]
Length = 720
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 195/309 (63%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F+ L I+ + ++ AIDEAHC+S WGHDFRP YR+L SLR
Sbjct: 110 VKLLYVAPERLLSERFLPFLDLINHQIGISSFAIDEAHCVSEWGHDFRPEYRQLKSLRKR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PD+P +ALTATA +V+ D+++ L L+ P + +SFNR NL+YE+R K AYA+L
Sbjct: 170 YPDIPTVALTATATDRVRADIIQQLGLKQPSIHIASFNRQNLYYEIRSKT--KYAYAELL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + AIVYCL R DEL+ L ++ YHAGL+D+ RS +I +
Sbjct: 228 ELIRET-EGSAIVYCLTRKKVDELTFKLQNDKVAALPYHAGLSDEERSKNQTRFIRDDVR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVRLV HF+IP+++E++YQESGRAGRD PS+ +++ D + +
Sbjct: 287 VMVATIAFGMGINKPDVRLVIHFDIPRNLESYYQESGRAGRDGEPSRCTVFFSFGDIKTI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ + + Q + ++ QM+DY EG+ CRR L FGE+ P + C
Sbjct: 347 EWSIDQKTDPQEQLIAKQQ---------LRQMIDYAEGTDCRRTIQLGYFGERFPGN-CG 396
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 397 N-CDNCRYP 404
>gi|402218656|gb|EJT98732.1| ATP-dependent DNA helicase [Dacryopinax sp. DJM-731 SS1]
Length = 966
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 208/353 (58%), Gaps = 19/353 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIH-SRGLLNLVAIDEAHCISSWGH 62
K++I +DL SG P +RLLY+TPE A+ F + K++ +R ++ L+ +DEAHCI+ WG
Sbjct: 147 KSRITKDLSSGHPRIRLLYITPEKLASAEFSKLMMKVYDNRQVMRLI-VDEAHCITEWGW 205
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK--SSFNRPNLF 120
DFRP YR L + R P+VPI+ALTA+A VQ D++ SL + + +L+ FNR NLF
Sbjct: 206 DFRPEYRTLGNFRQKYPEVPIMALTASATAAVQDDIVSSLKMSSEHLLRVVHPFNRKNLF 265
Query: 121 YEVRYKD------LLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCA 173
YE+++ ++ D + + + G +C I+YC R CD+++ +L GI+
Sbjct: 266 YEIKFVANTEPHLIMQDLVDYILKLTERRGRASCGIIYCRARAACDQVAGFLRRKGITAK 325
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YH G++ K ++ L +W+ + +VVVATVAFGMGID+ DVR + H+++PKS E +YQE+
Sbjct: 326 PYHRGVSPKVLATTLQEWLDDKVEVVVATVAFGMGIDKPDVRYILHYDLPKSFEGYYQET 385
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD SK +LYY ++D RR F++ ++ K + + S+++ ++
Sbjct: 386 GRAGRDGSASKCILYYSIEDARRAMFLVQQDLQKRIKGANKTATPSQRAPKSLELLIRMA 445
Query: 294 EG-SGCRRKKILESFGEQIP-------VSLCKNSCDACKHPNLLAKYLGELTS 338
E CR I FGE I + C CD CKHP + + + +L S
Sbjct: 446 ENIKTCRHVSICRYFGESIDDKDRDVLKTYCDKMCDVCKHPEKVRQRIQDLAS 498
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 198/333 (59%), Gaps = 21/333 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L +P ++LLYVTPE ++A+ +S L+ ++ RGLL IDEAHC+S WGHDF
Sbjct: 724 RIYMQLSRKEPIVKLLYVTPEKVSASNKLISALQNLYERGLLARFVIDEAHCVSQWGHDF 783
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV- 123
RP Y+KL LR P VP++ALTATA P+VQKD+ L + P V SFNR NL Y V
Sbjct: 784 RPDYKKLHELRKKFPQVPMMALTATATPRVQKDIHNQLNMNRPQVFTMSFNRTNLKYAVL 843
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+ K + +D + + K I+YCL R CD ++ L G+ +YHAGL+D
Sbjct: 844 PKKPKKVDEDC---ISWIKKHYPRDSGIIYCLSRNDCDAMAESLQRAGLLALSYHAGLSD 900
Query: 182 KARSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 901 GNREYVQTKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDG 960
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCR 299
S +L+Y D R++ I+S ++ +SQ+ +T ++ MV +CE S CR
Sbjct: 961 EISHCILFYSYADVHRIKRIISMDREGDSQTKATH-------YNNLHSMVHFCENSMECR 1013
Query: 300 RKKILESFGE-QIPVSLCKN----SCDACKHPN 327
R ++L FGE + S CK SCD C PN
Sbjct: 1014 RIQLLAYFGELKFNRSFCKEHADVSCDNCAKPN 1046
>gi|440296127|gb|ELP88968.1| ATP-dependent DNA helicase recQ, putative [Entamoeba invadens IP1]
Length = 517
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 221/408 (54%), Gaps = 46/408 (11%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+++ L+S P L LLYVTPE T F + + K++ G + L AIDEAHCIS WGHDF
Sbjct: 115 SRVLAILNSTSPELYLLYVTPEQIKTQRFQNIMNKLNDNGKIGLFAIDEAHCISQWGHDF 174
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RPSY +LS L+ P +P++ALTATA KV+ D++++L L++P + S+F+RPN+++ V
Sbjct: 175 RPSYLELSYLKQTFPQIPVIALTATATEKVKDDIIKALGLKDPNIFTSTFDRPNIYFRVL 234
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
YKDL ++ +L L + IVYC R C+ L YL + G YHAG++ R
Sbjct: 235 YKDLYENPQEELLKYLTQHQQEGGIVYCSTRNECELLEKYLKSKGFRVGKYHAGMSASDR 294
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
SV W +V+ATVAFGMGIDR DVR V H+NIPK++E F QE+GRAGRD P++
Sbjct: 295 ESVQKMWERKETGIVIATVAFGMGIDRSDVRFVVHWNIPKNIEGFIQEAGRAGRDGKPAE 354
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
S++++G DD FS R+++ + S+ ++ + C CRRK IL
Sbjct: 355 SVIFFGNDD------------------FS-RDKALEGEKSE--EIRELCVECVCRRKCIL 393
Query: 305 ESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL------------------------TSAV 340
+ F E + + CD C + + L ++ T++V
Sbjct: 394 KHFCETLERK-NERCCDLCNEMGRVKEDLEKVKIKLSRGNTRTTTKPLTIKNPEFKTASV 452
Query: 341 LQKNHFSQIFISSQDMTDGGQYSEFWNRDDEASGSEEDISDCDGNINL 388
+ +N + F S+ + + ++++ NR E E C G+ L
Sbjct: 453 ITENERTNSFQSASQLLEKQKHAKRENRSIEKKECESKPRKCKGDEGL 500
>gi|126661004|ref|ZP_01732090.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
gi|126617703|gb|EAZ88486.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. CCY0110]
Length = 710
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 191/312 (61%), Gaps = 14/312 (4%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++L+YV PE F++ L + + L+ AIDEAHC+S+WGHDFRP YR+L L
Sbjct: 108 KGKIKLVYVAPERLLNDNFLNFLDFLKQKVGLSAFAIDEAHCVSAWGHDFRPEYRQLKQL 167
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P VP+ ALTATA +V+ D++E L LQNP V +SF+RPNL+YEV+ K +Y
Sbjct: 168 RFRYPKVPMFALTATATKRVRADIIEQLGLQNPTVHVASFDRPNLYYEVQQKS--RRSYT 225
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L + ++ N + I+YCL R + ++ L GI YHAG+ D R++ +I
Sbjct: 226 QLLNYIR-NQEGSGIIYCLSRKNVETIALRLQQDGIDALPYHAGMYDDERATNQTRFIRD 284
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+++VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD P+ L++ D
Sbjct: 285 DVRIIVATIAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDL 344
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+R+E+++ + + Q ++ Q+VDY EG+ CRR +L FG+Q
Sbjct: 345 KRLEYLIDQKIDEKEQRVGRQQ---------LRQVVDYAEGTECRRSIVLRYFGQQYK-G 394
Query: 315 LCKNSCDACKHP 326
C N CD CKHP
Sbjct: 395 KCDN-CDNCKHP 405
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 194/318 (61%), Gaps = 7/318 (2%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + L +H + AIDEAHC+S WGHDFRP YRKL+ LR+Y
Sbjct: 114 IKLLYVAPERLNQEFISNFLVDLHQEVGIAGFAIDEAHCVSEWGHDFRPDYRKLAQLRHY 173
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP L LTATA +V+ D++ L L+ P V +SFNRPNL+YEVR K Y +L
Sbjct: 174 FPKVPWLGLTATATDRVRSDIINQLELREPHVHIASFNRPNLYYEVRRKTTA--PYKELL 231
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ +K + + I+YCL R DEL+ L GI YHAGL+ + R+ + +I +
Sbjct: 232 AQVKQS-EGSGIIYCLSRKKVDELTTKLKQDGIKVVPYHAGLDGETRTKNQNSFIRDDVK 290
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+ LY+GM D + +
Sbjct: 291 VIVATVAFGMGINKPDVRFVIHYDLPRNIEGYYQESGRAGRDGEPAHCTLYFGMGDIKTI 350
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E++++ Q + ++ E + + ++++Y E + CRR L FGE P + C
Sbjct: 351 EYLIA--QKVDPETGMALEDEQRIATQQLRRVINYAEATECRRIIQLGYFGESFPGN-CD 407
Query: 318 NSCDACKHPNLLAKYLGE 335
N CD CK+P ++ + E
Sbjct: 408 N-CDNCKYPRPISDWTIE 424
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 199/324 (61%), Gaps = 15/324 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T+IY DL P+L+LLY+TPE + +P M + +++ GLL IDEAHC+S WGHD
Sbjct: 570 TQIYRDLRQTPPTLKLLYLTPEKVVQSPAIMDLFRNLNNNGLLARAVIDEAHCVSQWGHD 629
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP+Y++L L+ P +PILALTATA +V+KDV+ +L ++NP+ K SFNRPNL Y V
Sbjct: 630 FRPNYKELKLLKTEFPSLPILALTATATERVKKDVIFNLHMKNPITFKQSFNRPNLQYAV 689
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+ K ++DD A+ + K IVYC+ R C +++ L G+ YHA +
Sbjct: 690 VKKSKKIVDDI-AEFIN--KFYPGKSGIVYCISRNDCVTVASELRKKGLRANFYHANMEP 746
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R + W R +++V+T+AFGMGI++ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 747 DERQRTQESWTRDRIKIIVSTIAFGMGINKPDVRFVIHHSLPKSLEGYYQESGRAGRDGN 806
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
S +LYY D+ R E +L KN + ++ + S ++++ + +++V YCE CRR
Sbjct: 807 LSHCILYYSFGDKFRQE-VLIKNSTGSTHA------SIRENMENLNRIVGYCENPVDCRR 859
Query: 301 KKILESFGE-QIPVSLCKNSCDAC 323
K L+ GE +CK +CD C
Sbjct: 860 KLQLQYLGEDSFDKEMCKKTCDNC 883
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 196/311 (63%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELT-ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ A+ + K++ G L + +DEAHC+S+WGHDFRP Y++LS +
Sbjct: 690 LELVYISPEMIKASVQCKKAISKLYEHGKLARIVVDEAHCVSNWGHDFRPDYKELSFFKQ 749
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L NP+ LK SFNR NLFY+V K+ ++ +
Sbjct: 750 EYPDIPMIALTATASEQVRMDIIHNLQLNNPVFLKQSFNRTNLFYQVLKKE--KNSIFQM 807
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +++ + I+YC + +C++ SA + G+ CA YHAG++ R V DW + R
Sbjct: 808 CDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHAGMDPDERFQVQQDWQADR 867
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S+ ++YY D R
Sbjct: 868 VQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGNFSQCIMYYSFRDVR 927
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ K+++ + + +K + Q++ YC+ + CRR+ +L F EQ
Sbjct: 928 TIQTMIQKDKNLDM-------INKEKHLDKLQQVMQYCDNRTDCRRQLVLSYFNEQFDPK 980
Query: 315 LCKNSCDACKH 325
C +CD CK+
Sbjct: 981 DCGKNCDNCKN 991
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 203/324 (62%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++P F L ++++ ++ IDEAHC+S WGHDFR
Sbjct: 732 IYRDLESHPPLVKLLYVTPEKISSSPRFQDTLDQLNANNYISRFVIDEAHCVSQWGHDFR 791
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P+VP +ALTATA P+V++D+++ L L + SSFNR NL Y+V
Sbjct: 792 PDYKKLGILRKRFPNVPTMALTATATPRVRQDILQQLNLTHCKWFLSSFNRRNLRYQVLP 851
Query: 126 KDLLDDAYADLCSVLKANGDTCA-IVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + D+ + +++ T + I+YCL R CDE++ + A GI +YHAGL D R
Sbjct: 852 KKGVS-TLDDMRNFIQSRPATASGIIYCLSRKECDEVAKKMCAVGIRALSYHAGLTDVVR 910
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DWI+++ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 911 ESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIAD 970
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D +R++ ++ ++ + + K I + +++V YCE + CRR +
Sbjct: 971 CILYYNYSDMQRLKKMMDADR-------ALQYHVKKIHIENLNRIVGYCENITDCRRAQQ 1023
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L+ FGE C + +CD C
Sbjct: 1024 LDYFGEHFTSEQCLEDRRTACDNC 1047
>gi|194747940|ref|XP_001956407.1| GF25191 [Drosophila ananassae]
gi|190623689|gb|EDV39213.1| GF25191 [Drosophila ananassae]
Length = 1091
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 201/343 (58%), Gaps = 19/343 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ DL + K +LR LY+TPE AT F L +H L A+DEAHC+S WGHDFR
Sbjct: 103 RVIMDLRAVKTTLRFLYITPEQAATKFFQELLHTLHKHKKLAYFAVDEAHCVSQWGHDFR 162
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV--LKSSFNRPNLFYEV 123
P Y KL LR+ PD+ LALTATA+ +V++D+ + L L+ P+ SF R NLFY++
Sbjct: 163 PDYLKLGELRSKYPDITWLALTATASKEVREDIYKQLRLKQPVAQFTTPSF-RKNLFYDI 221
Query: 124 RYKDLLDDAYADLCSVLKA-NGDT------------CAIVYCLERTTCDELSAYLSAGGI 170
YK+ ++D + L + GD C IVYC R + ++ ++ GI
Sbjct: 222 VYKNSIEDDFQHLADFARHCFGDPKEFKEQSKPQRGCGIVYCRTREQVERMAIGVTKQGI 281
Query: 171 SCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
+ AYHAGL R+ V + W+ K ++ AT +FGMG+D+ VR V H+++P+++ A+Y
Sbjct: 282 AAVAYHAGLKTAERTEVQEAWMRGDKPIICATNSFGMGVDKATVRFVIHWDVPQNVAAYY 341
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
QESGRAGRD LPS LYYG +D R + F+L +N ++ ++ +E +++++ F ++
Sbjct: 342 QESGRAGRDGLPSFCRLYYGREDVRSIRFLL-QNDAQRARGRGDKEMLTERALKQFEKIT 400
Query: 291 DYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C + CD CK P K L
Sbjct: 401 EFCERTTCRHKLFSDFFGD--PPPQCNSQCDVCKRPKKAEKAL 441
>gi|288800855|ref|ZP_06406312.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332316|gb|EFC70797.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
Length = 725
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/322 (43%), Positives = 188/322 (58%), Gaps = 19/322 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ D+ SGK +LLYV PE P + LK + ++ AIDEAHCIS WGHDF
Sbjct: 102 TQVMADIRSGKT--KLLYVAPESLIKPENVEFLKTVK----ISFYAIDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR + + N + + P++ALTATA KV+ D+ +SL + + KSSFNR NL+YEVR
Sbjct: 156 RPEYRNIRPMINNIGEAPVIALTATATDKVRTDIKKSLGILDAKEFKSSFNRANLYYEVR 215
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +D +L +K N IVYCL R +ELSA L A I AAYHAGL++ R
Sbjct: 216 PK--TNDVDKELIKFIKKNEGKSGIVYCLSRKKVEELSAILQANNIKAAAYHAGLDNIPR 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 274 SQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVVHYDIPKSLEGYYQETGRAGRDGGEGH 333
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 334 CLAFYSYKDIQKLE--------KFMEGKPVAEQDIGRQL--LKETAAYAESSVCRRKMLL 383
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE+ P C N CD C P
Sbjct: 384 HYFGEEYPKENCGN-CDNCNRP 404
>gi|195019459|ref|XP_001984985.1| GH16802 [Drosophila grimshawi]
gi|193898467|gb|EDV97333.1| GH16802 [Drosophila grimshawi]
Length = 1110
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 202/344 (58%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K ++R LY+TPE AT F L +H L A+DEAHC+S WGHD
Sbjct: 108 RERVITDLRAIKTNIRFLYITPEQAATKFFQDLLHSLHKHKKLAYFAVDEAHCVSQWGHD 167
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR PDV LALTATA+ +V++D+ + L L+ P+ S+ + R NL+Y+
Sbjct: 168 FRPDYLKLGELRAKYPDVVWLALTATASREVREDIYKQLKLRQPVAQFSTPSFRSNLYYD 227
Query: 123 VRYKDLLDD------AYADLC-------SVLKANGDTCAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D A+A C L C I+YC R + ++ +S G
Sbjct: 228 IVYKNSIEDDFQHLAAFAQHCLGDEEQFKALPKPKRGCGIIYCRTRDQVERVAVGVSKQG 287
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I+ AYHAGL R V + W+ K ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 288 IAAIAYHAGLKTADRVEVQEAWMRGDKAIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 347
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD LPS LYYG +D R + F+L ++ ++ ++ RE +++++ F ++
Sbjct: 348 YQESGRAGRDNLPSYCRLYYGREDVRSIRFLL-QHDAQRARGRGDREMLTERALRQFERI 406
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
VD+CE + CR K + FG+ P C+ CD CK P K L
Sbjct: 407 VDFCEQTRCRHKLFADYFGD--PAPDCRGQCDVCKRPKQATKAL 448
>gi|392591898|gb|EIW81225.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 777
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 201/368 (54%), Gaps = 24/368 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ KI +DL G P RLLY TPE T L+ ++ LN + +DEAHCIS WGHD
Sbjct: 93 RQKIIDDLVYGDPQNRLLYTTPEKLCTKDITRLLQVVYDDHKLNRLVVDEAHCISEWGHD 152
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFY 121
FR YRKL R+ P+VP++ALTATA P VQ+D++ SL + QN FNR NLFY
Sbjct: 153 FRAEYRKLGHFRDRFPEVPVMALTATATPSVQRDIIRSLRMDEQNMYKAVHPFNRDNLFY 212
Query: 122 EVRYKDLLDD-----AYADLCSVL--KANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
EVRYK +D D + L + + I+YC R TCD+LSA+L G+S
Sbjct: 213 EVRYKSGVDPLSRMAEVLDFITTLYRRRERPSSGIIYCRTRATCDDLSAFLRGKGLSARP 272
Query: 175 YHAGLNDKARSSVLDDWISSRK-----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
YH G+ + L W + VV AT+AFGMGID+ DVR V H+++P S+E +
Sbjct: 273 YHRGIKSNVLDTTLKQWENGGNGEGGVDVVCATIAFGMGIDKADVRYVIHYDLPHSLEGY 332
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRE--RSSKKSISDFS 287
YQE+GRAGRD S+ +LYY +D + + +++ + K S + S++SI+ FS
Sbjct: 333 YQETGRAGRDGAASRCILYYSREDAYQAQRLVADSHIKRQTSAEEMNGPQPSQRSINSFS 392
Query: 288 QMVDYCEGSG-CRRKKILESFGEQIPV-------SLCKNSCDACKHPNLLAKYLGELTSA 339
++D+ E CR I FGE + + S C CD CK+P + ELTS
Sbjct: 393 TLIDFAENVNICRHVLICRYFGEVVDISDRDQLQSYCDGMCDVCKYPEKTRRRKQELTSE 452
Query: 340 VLQKNHFS 347
L +S
Sbjct: 453 ELTFAEYS 460
>gi|343429696|emb|CBQ73268.1| related to SGS1-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1258
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 188/312 (60%), Gaps = 11/312 (3%)
Query: 15 KPSLRLLYVTPELTAT-PGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSS 73
K SLRLLY+TPE T P L +++SR L +DEAHC+S WGHDFRP Y +L +
Sbjct: 444 KSSLRLLYLTPEFIRTSPQAQLLLDELYSRKQLARFVVDEAHCVSQWGHDFRPHYTELGA 503
Query: 74 LRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAY 133
LR P VPI+ALTATA +V KDV L ++N L L SSFNRPNL Y+VR K A
Sbjct: 504 LRKQYPTVPIMALTATANARVVKDVEACLQMKNVLQLSSSFNRPNLEYQVRSKPR-SKAV 562
Query: 134 ADLCS-VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
D+ S +L ++ D C IVYCL R TC+ ++A L GIS YHA L R+ V D W
Sbjct: 563 DDIASFILASHKDECGIVYCLSRETCETVAADLIKHGISAHHYHARLQKDDRAMVQDKWQ 622
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
S+ +V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +LYY
Sbjct: 623 SNEFKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKSSACILYYSYG 682
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQI 311
D ++E ++ + K+ + +S+ M +CE CRR ++L FGE
Sbjct: 683 DVLKIEKMVRGEEDKSQDAID-------RSLDSLRMMQMFCENVIECRRVQVLRYFGEDF 735
Query: 312 PVSLCKNSCDAC 323
C ++CD C
Sbjct: 736 SADQCHSTCDNC 747
>gi|428307721|ref|YP_007144546.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
gi|428249256|gb|AFZ15036.1| ATP-dependent DNA helicase RecQ [Crinalium epipsammum PCC 9333]
Length = 728
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 189/309 (61%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++LYV PE T F L+++ + ++ AIDEAHC+S WGHDFRP YR+L LR
Sbjct: 110 IKILYVAPERLLTDKFTLFLEQVQRQVGISAFAIDEAHCVSQWGHDFRPEYRQLKQLRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
DVPI ALTATA +V++D+++ L L+ P + SSFNRPNL+YEV+ K AY L
Sbjct: 170 YRDVPIFALTATATNRVREDIIQQLALRQPSIHISSFNRPNLYYEVQLKQ--KQAYLQLL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + IVYCL R DE++ L GIS YHAG+ D+ R+ +I Q
Sbjct: 228 KLIR-QYEGSGIVYCLSRRHVDEVAFRLQKDGISALPYHAGMTDEERAYNQTRFIRDDVQ 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P++ L +G D R +
Sbjct: 287 VMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPARCTLLFGTGDLRTI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+++ + Q + ++ +M+DY EG+ CRRK L FGE+ + C
Sbjct: 347 NYLIEQKSDAQEQRVARQQ---------LQKMIDYAEGTDCRRKIQLSYFGERFAGN-CD 396
Query: 318 NSCDACKHP 326
N CD C+ P
Sbjct: 397 N-CDNCRDP 404
>gi|344291164|ref|XP_003417306.1| PREDICTED: ATP-dependent DNA helicase Q5 [Loxodonta africana]
Length = 410
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 189/305 (61%), Gaps = 10/305 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q K ++ DL+ KP +LLY+TPE+ A+ F L + SR LL+ + +DEAHC+S WG
Sbjct: 107 QEKKEVLSDLEREKPQTKLLYITPEMAASASFQPTLNSLVSRHLLSYLVVDEAHCVSQWG 166
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLF 120
HDFRP Y +L +LR+ L P +ALTATA +VQ+DV +L L+ P+ K+ R NLF
Sbjct: 167 HDFRPDYLRLGALRSRLSHAPCVALTATATLQVQEDVFAALHLKPPVATFKTPCFRANLF 226
Query: 121 YEVRYKDLLDDAYADLCSV-LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISC 172
Y+V++K+LL D Y +L LKA G+ C IVYC R C++L+ LS G++
Sbjct: 227 YDVQFKELLSDPYGNLRDFCLKALGEKADKGPSGCGIVYCRTREACEQLAIELSYRGVNA 286
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYHAGL R V +W+ + V+VAT++FGMG+D+ +VR V H+NI KSM +YQE
Sbjct: 287 KAYHAGLKAPDRMLVQSEWMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQE 346
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD PS LYY DR ++ F++ K +K + + S K +IS F +V +
Sbjct: 347 SGRAGRDGKPSWCRLYYSRSDRDQVSFLIRKEVAKLQEKRGNKA-SDKAAISAFDALVTF 405
Query: 293 CEGSG 297
CE G
Sbjct: 406 CEELG 410
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 189/325 (58%), Gaps = 19/325 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I +++S RLLYVTPE L + FM+KL+K + GLL L+AIDE HC S WGHDF
Sbjct: 169 RILAEMNSPGCKFRLLYVTPERLAKSKRFMAKLEKAYQAGLLKLIAIDEVHCCSQWGHDF 228
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L LR PD PIL LTATA V +D+ E L + L ++SFNRPNLFY+V+
Sbjct: 229 RPDYKFLGVLRRQFPDTPILGLTATATVAVLQDIKEILNIPMALEFRASFNRPNLFYQVQ 288
Query: 125 YK-DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K D ++ +C +LK I+YC + + + L G+ YHA ++
Sbjct: 289 QKPDRPEELLQIVCKLLKGQFSGQSGIIYCFSKKDSETFAQNLRTNGVKAEHYHADMDPN 348
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W+S++ QV+VATVAFGMGID+ DVR+V H +PKS+E +YQESGRAGRD P
Sbjct: 349 ERGMVHRKWLSNKCQVIVATVAFGMGIDKADVRVVIHLALPKSVENYYQESGRAGRDGQP 408
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ LLY+G D R+ + + + + + +M+ YC G + CRR+
Sbjct: 409 ASCLLYFGFADLFRLSVTVC---------------NERNGLENLYKMLAYCTGLASCRRR 453
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+ F EQ + C+++CD C+ P
Sbjct: 454 YFADHFDEQWKPTWCQSACDNCQRP 478
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 202/318 (63%), Gaps = 17/318 (5%)
Query: 11 LDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
L + K ++LLYVTPE A+ G +S+ L+ +++R LL + IDEAHC+S WGHDFRP Y+
Sbjct: 569 LMAKKVQVKLLYVTPEGLASNGAISRVLESLYTRKLLARIVIDEAHCVSHWGHDFRPDYK 628
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+L LR+ VP++ALTATA V+KDV+ +L ++N + +KSSFNRPNL+YE++ K
Sbjct: 629 QLGILRDKYRGVPVMALTATANEIVKKDVITTLRMENCIEMKSSFNRPNLYYEIKPK--- 685
Query: 130 DDAYADLCSVLKANG--DTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSS 186
D +A++ + +NG D I+YCL RT+C++++A L + G+ YHAGL+ R
Sbjct: 686 KDVFAEMHRFI-SNGRLDQSGIIYCLSRTSCEQVAAKLRNEYGLKAWHYHAGLDKAERQR 744
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
+ W + +V+VAT+AFGMG+D+ DVR V H + PKS+E +YQE+GRAGRD P+ +
Sbjct: 745 IQSSWQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFPKSLEGYYQETGRAGRDGKPAHCI 804
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILE 305
++Y D + +++ + T+ER + Q++ +CE S CRRK+IL
Sbjct: 805 MFYSYKDSITFQKLITSGEG----DAETKERQRQM----LRQVIQFCENKSDCRRKQILS 856
Query: 306 SFGEQIPVSLCKNSCDAC 323
FGE +LC CD C
Sbjct: 857 YFGESFDKALCNRGCDIC 874
>gi|384253210|gb|EIE26685.1| ATP-dependent DNA helicase, partial [Coccomyxa subellipsoidea
C-169]
Length = 513
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 190/327 (58%), Gaps = 13/327 (3%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGF-MSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I + L P +R+L+VTPE A + M L +HSR LL+ VA+DEAHC+S WGHDFR
Sbjct: 95 IMQRLQQTPPDIRVLFVTPEKVARSDYLMRTLDVLHSRRLLDRVAVDEAHCVSQWGHDFR 154
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY---E 122
P Y+ LS + P VP+LALTATA P+VQ DV++ L L++ +V +SSFNR NL Y +
Sbjct: 155 PDYKGLSVFKRRYPMVPLLALTATATPRVQHDVVQQLSLKHCVVFRSSFNRQNLRYGKFD 214
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCA-AYHAGLND 181
K++ D + C + C IVYCL R C++++A L C YHA L
Sbjct: 215 DAIKEMEDRIARNFCHHGRVQ---CGIVYCLSRNDCEKVAAELQEYSRGCVFHYHAALTQ 271
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R V +W R Q++VAT+AFGMGI++ DVR V HF++PKS+E ++QE+GR GRD
Sbjct: 272 QEREEVQANWTHDRMQIIVATIAFGMGINKPDVRFVMHFSVPKSLEGYHQETGRGGRDGK 331
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
+ +LYY D RM +L QS Q+ S + ++ + M+ YCE CRR
Sbjct: 332 VATCILYYSYADAVRMRHML--KQSAEEQNTSPAQLQC--NMDSLNHMIAYCEEQVECRR 387
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPN 327
+L FGE V C +CD C N
Sbjct: 388 SVLLAHFGESFDVKRCHGTCDVCASRN 414
>gi|299743122|ref|XP_001835556.2| hypothetical protein CC1G_03338 [Coprinopsis cinerea okayama7#130]
gi|298405510|gb|EAU86127.2| hypothetical protein CC1G_03338 [Coprinopsis cinerea okayama7#130]
Length = 787
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/385 (38%), Positives = 215/385 (55%), Gaps = 31/385 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I EDL+S P LRLLYVTPE +T F+ + +H G LN + +DEAHCIS WGHD
Sbjct: 112 RQEITEDLESDTPQLRLLYVTPEKLSTQEFLRLMDHLHDVGQLNRLVVDEAHCISEWGHD 171
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS--SFNRPNLFY 121
FR YR++ S RN PDVPI+ALTATA P VQ D++ +L L + + ++ FNR NL+Y
Sbjct: 172 FRAEYRRIGSFRNRYPDVPIMALTATATPDVQSDIIHNLKLSSDNLFRALHPFNRANLYY 231
Query: 122 EVRY------KDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCAA 174
EVRY K ++D + + ++ G +C I+YC + C+EL+ +L GI+ +
Sbjct: 232 EVRYLSDRNPKTRMEDIHKYIKTLYTRRGKVSCGIIYCRTKAACEELTQFLRKNGINAGS 291
Query: 175 YHAGLNDKARSSVLDDWI--SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
Y+ G+ + L W+ S VVVAT+AFGMGID+ DVR + HF++PKS E FYQE
Sbjct: 292 YYRGIPPTKLDATLRRWLDGSGEIDVVVATIAFGMGIDKGDVRYIIHFDLPKSFEGFYQE 351
Query: 233 SGRAGRDQLPSKSLLYYGMDD--RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
+GRAGRD LP+K +LY+ +D R + K++ ++ + + S+ +
Sbjct: 352 TGRAGRDGLPAKCVLYFSREDCIDVRKWVMSPKDRVRDEYHGPPPTQRAGDSLDALFKFA 411
Query: 291 DYCEGSGCRRKKILESFGEQIPV-------SLCKNSCDACKHPNLLAKY--------LGE 335
+ S CR I FGE I LC + CD CK+P A +G+
Sbjct: 412 E--SPSLCRHVSICRYFGETIDTIDKEAMKELCNDMCDVCKYPEKTAMRHARLSPIEVGD 469
Query: 336 LTSAVLQK-NHFSQIFISSQDMTDG 359
S VL + N+++ + + T G
Sbjct: 470 CRSIVLARSNNYNTMNAQTSSTTSG 494
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 128/329 (38%), Positives = 200/329 (60%), Gaps = 22/329 (6%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+L+Y++PE+ T + ++ +++ L V +DEAHC+SSWGHDFRP Y+ +S +
Sbjct: 844 LQLVYLSPEMVNTSQHIQRIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQ 903
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK-----DLLDD 131
P VP++ALTATA KV+ D++ L + +P++LK SFNR NLFYE+++K D + D
Sbjct: 904 QFPQVPVMALTATANEKVRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRD 963
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
+L + I+YC + +C+ S L+ G+ C+ YHAGL+ R + DW
Sbjct: 964 Y------ILTKQQNKTGIIYCHSKQSCEVTSDRLNQWGVRCSYYHAGLSPTERFQIQTDW 1017
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
+R QV+ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD LPS+ +++Y
Sbjct: 1018 QQNRIQVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSY 1077
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKS-ISDFSQMVDYCEG-SGCRRKKILESFGE 309
D R ++ ++ ++ S +R K+S ++ Q+V YCE S CRRK++L F E
Sbjct: 1078 KDARSLQNMIQRD--------SELDREGKESHLAKLRQVVQYCENTSDCRRKQVLHYFNE 1129
Query: 310 QIPVSLCKNSCDACKHPNLLAKYLGELTS 338
+ + C CD C + N + ++T+
Sbjct: 1130 RFDPAHCARKCDNCLNNNSANAVIHDVTA 1158
>gi|371777407|ref|ZP_09483729.1| ATP-dependent DNA helicase [Anaerophaga sp. HS1]
Length = 726
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 191/321 (59%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ ED+ +G+ RLLYV PE + LK++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 KVKEDVIAGRT--RLLYVAPESLTKEENIQFLKQVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + + P++ALTATA PKVQ D+ ++L + N V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGEAPVIALTATATPKVQHDIQKNLGMLNARVFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +A ++ +LK N AI+YCL R +EL+ L GI AYHAG++ RS
Sbjct: 217 KV---NATREIIKILKDNPGKSAIIYCLSRKKVEELAETLVVNGIKALAYHAGMDAATRS 273
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR+V H++IPKS+E +YQE+GRAGRD K
Sbjct: 274 KNQDKFLMEEIDVIVATIAFGMGIDKPDVRMVIHYDIPKSLEGYYQETGRAGRDGGEGKC 333
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 334 IAFYSYKDIQKLE--------KFMQGKPLAEQEIGKQL--LLETVAYAESSLCRRKTLLH 383
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C +CD C +P
Sbjct: 384 YFGESYTEENC-GACDNCLNP 403
>gi|374375555|ref|ZP_09633213.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
gi|373232395|gb|EHP52190.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
Length = 751
Score = 260 bits (665), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 194/325 (59%), Gaps = 24/325 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPG--FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++++DL +GK +LLYV PE LT F S LK ++ A+DEAHCIS WGH
Sbjct: 122 EVHDDLLTGKT--KLLYVAPETLTKQENLTFFSDLK-------ISFFAVDEAHCISEWGH 172
Query: 63 DFRPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR+L + N + P+ ++ALTATA PKVQ D++++L L++ + SSFNR NL+Y
Sbjct: 173 DFRPEYRRLREMMNQINPEAAVIALTATATPKVQSDIVKNLALKDANIFISSFNRDNLYY 232
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
E+ K + +K + I+Y L R T +EL+ L A GI AYHAGL+
Sbjct: 233 EIVPKVSKKQTNESMVRFIKGMKNKSGIIYTLNRKTTEELADILMANGIKAVAYHAGLDS 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ D +++ QV+VAT+AFGMGID+ D+R V H+NI KS+E +YQE+GRAGRD L
Sbjct: 293 KLRAERQDQFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNISKSIENYYQETGRAGRDGL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
K LLYY D ++E ++ + S RE ++ ++ V + E CRRK
Sbjct: 353 EGKCLLYYSHKDVSKLEHLM------RDKPLSEREVGAQL----INETVAFAESGVCRRK 402
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
IL FGEQ V C CD C+HP
Sbjct: 403 VILSYFGEQYTVENC-GLCDNCRHP 426
>gi|326800755|ref|YP_004318574.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
gi|326551519|gb|ADZ79904.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
Length = 729
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/320 (42%), Positives = 190/320 (59%), Gaps = 20/320 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ +D+ GK +LLYV PE A + LK I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TRVKQDVLDGKT--KLLYVAPESLAKTDNIEFLKLI----TVSFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + N + ++PI+ALTATA PKVQ D+ ++L + + + KSSFNRPNL+YEV
Sbjct: 156 RPEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMNDATLFKSSFNRPNLYYEV 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ +K N I+YCL R +E++ L+ GIS YHAGL+ K
Sbjct: 216 RPKK---NVVKEIVKFIKNNPSKSGIIYCLSRKKVEEIAEVLNINGISALPYHAGLDAKT 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RAETQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E S CRRK+I
Sbjct: 333 VCIAFYSEKDIEKL--------TKFMKDKPVSEREIGTQI--LKEVIDYSESSVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGE + C N CD C
Sbjct: 383 LHYFGENFNEAGCNNMCDNC 402
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 191/327 (58%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L P+L+LLYVTPE ++A+P F + L +++R LL IDEAHC+S WGHDFR
Sbjct: 567 IYRELSKKDPALKLLYVTPEKISASPKFCNILSSLYNRRLLARFVIDEAHCVSQWGHDFR 626
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y+KL+ LR P VP++ LTATA P+V+ D++ L + P SSFNRPNL Y +
Sbjct: 627 PDYKKLNCLRENYPKVPVIVLTATATPRVRSDILHQLRITTPKWFMSSFNRPNLRYSIIA 686
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A + + K + C IVYCL R CD+ + ++ I +YHAGL D
Sbjct: 687 KKSKNCSDEVIAMIKTKYK---NDCGIVYCLSRKDCDDYAMHMRKNSIKALSYHAGLTDN 743
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS + WIS +VV AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 744 NRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGEN 803
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +L+Y D R+ ++ + S + K I + +MV +CE + CRR
Sbjct: 804 ADCILFYNYTDMHRIRKMIELDNSNPT--------IIKTHIDNLFKMVSFCENKTDCRRT 855
Query: 302 KILESFGEQIPVSLC----KNSCDACK 324
+ L FGE C SCD C+
Sbjct: 856 QQLNYFGEIFDREQCIANKVTSCDNCR 882
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 192/326 (58%), Gaps = 15/326 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I+ L +P L++LYVTPE + A+ L +H RG L + IDEAHC+S WGHDFR
Sbjct: 536 IFTKLCMSEPGLKMLYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWGHDFR 595
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L R PDVPI+ALTATA +V++DV+ L + + SSFNRPNL Y+V
Sbjct: 596 PDYKRLGEFRKKYPDVPIMALTATATTRVREDVLHQLQISGTKLFLSSFNRPNLLYKVVP 655
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K A A++ +++K + IVYCL R CD + Y+ GI +YHAGL+D R
Sbjct: 656 KKG-KSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSDPKR 714
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ V WI+++ +V AT+AFGMGID+ DVR V H+++PKS+E +YQESGRAGRD S
Sbjct: 715 NDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGKTSH 774
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
LYY D R+ ++ + S N + S K + + ++V YCE CRR
Sbjct: 775 CFLYYSYQDMHRIRKLIELDDSGNHE-------SKKVHMQNLFRIVSYCENKADCRRTLQ 827
Query: 304 LESFGEQIPVSLC----KNSCDACKH 325
L FGE + C + +CD C++
Sbjct: 828 LNYFGETFDDNKCISNKETACDNCQN 853
>gi|254413079|ref|ZP_05026851.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
gi|196180243|gb|EDX75235.1| ATP-dependent DNA helicase RecQ [Coleofasciculus chthonoplastes PCC
7420]
Length = 731
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 195/310 (62%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F L+++ S+ ++ A+DEAHC+S+WGHDFRP YR++ LR
Sbjct: 132 IKLLYVAPERLLAERFAPFLEQVRSQVGISAFAVDEAHCVSAWGHDFRPEYRQIKQLRQR 191
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PD+PILALTATA +VQ+D+++ L L+ P + +SFNRPNL+YE++ K +Y L
Sbjct: 192 YPDIPILALTATATKRVQQDIVQQLTLRQPSIHIASFNRPNLYYEIQPKQ--RQSYNQLF 249
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++++ + I+YCL R + DE++ L GIS YHAG++D RSS + +I Q
Sbjct: 250 KKVQSHKGS-GIIYCLSRRSVDEVAFRLQKDGISALPYHAGMSDIDRSSNQNRFIRDDVQ 308
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P+ ++Y D R+
Sbjct: 309 VIVATIAFGMGINKLDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAYCTIFYRPGDVPRL 368
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++ + Q + ++ Q+ DY EG+ CRR +L FGE+ + C
Sbjct: 369 DYLIDQKPDPREQRVARQQ---------LQQIRDYAEGTDCRRTILLRYFGERFKGN-CD 418
Query: 318 NSCDACKHPN 327
N CD C HP
Sbjct: 419 N-CDNCCHPK 427
>gi|427788647|gb|JAA59775.1| Putative atp-dependent dna helicase [Rhipicephalus pulchellus]
Length = 924
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/352 (38%), Positives = 204/352 (57%), Gaps = 20/352 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S P RLLYVTPE A+ F + L ++ G L+ +DEAHC+S WGHD
Sbjct: 120 RQRVRRDLMSMSPETRLLYVTPEQVASEKFQAVLSALYKIGKLSRFVVDEAHCVSEWGHD 179
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FRP Y KL +R+ PDVP++ALTATA+ KV D++ L L+ P+ + K+S R NL+Y+
Sbjct: 180 FRPDYLKLGKVRDMFPDVPMVALTATASAKVFDDILVQLRLRQPVAIFKTSSFRANLYYD 239
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT----------CAIVYCLERTTCDELSAYLSAGGIS 171
V +K+ LD+ + +L + ++A G+ IVYC R C+E+S L++ G+
Sbjct: 240 VEFKEALDEPFENLKNFSIRALGEGWEEEDPKKRGSGIVYCRTRDACEEVSMKLTSLGLL 299
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
YH G+ R D+W + ++ ATV+FGMG+DR VR V H+++P+S+ A+YQ
Sbjct: 300 TKPYHGGMKAAERKENQDEWTRGQVPIIAATVSFGMGVDRAMVRFVAHWSVPQSIPAYYQ 359
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQ--SKNSQSFSTRERSSKKSISDFSQM 289
ESGRAGRD PS +YY DR+ + ++L +++ +K ++ E ++K F +M
Sbjct: 360 ESGRAGRDGRPSYCRIYYSRKDRKSITYLLKRDEQGAKTKRAKIVAEMATKA----FEKM 415
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVL 341
YCEG CR + FG+ + C +CDAC P L L + +L
Sbjct: 416 ASYCEGMTCRHTVLCREFGDDL--KGCGKNCDACTKPKQLEGRLSSFQATLL 465
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 192/326 (58%), Gaps = 15/326 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I+ L +P L++LYVTPE + A+ L +H RG L + IDEAHC+S WGHDFR
Sbjct: 536 IFTKLCMSEPGLKMLYVTPEKIAASMKLGQILNNLHCRGKLARLVIDEAHCVSHWGHDFR 595
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L R PDVPI+ALTATA +V++DV+ L + + SSFNRPNL Y+V
Sbjct: 596 PDYKRLGEFRKKYPDVPIMALTATATTRVREDVLHQLQISGTKLFLSSFNRPNLLYKVVP 655
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K A A++ +++K + IVYCL R CD + Y+ GI +YHAGL+D R
Sbjct: 656 KKG-KSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSDPKR 714
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ V WI+++ +V AT+AFGMGID+ DVR V H+++PKS+E +YQESGRAGRD S
Sbjct: 715 NDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGKTSH 774
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
LYY D R+ ++ + S N + S K + + ++V YCE CRR
Sbjct: 775 CFLYYSYQDMHRIRKLIELDDSGNHE-------SKKVHMQNLFRIVSYCENKADCRRTLQ 827
Query: 304 LESFGEQIPVSLC----KNSCDACKH 325
L FGE + C + +CD C++
Sbjct: 828 LNYFGETFDDNKCISNKETACDNCQN 853
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 190/331 (57%), Gaps = 29/331 (8%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + ++L SGKPS +LLYVTPE + F+ L +H RGLL IDEAHC+S WGHD
Sbjct: 267 SAVIQELRSGKPSFKLLYVTPERMAGNSSFIGILIGLHQRGLLARFVIDEAHCVSQWGHD 326
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L L+ P VPI+ALTATA V KD++ +L + N VLK SF+R NL YEV
Sbjct: 327 FRPDYRGLGCLKQNFPRVPIMALTATATASVCKDILSTLRIPNATVLKRSFDRTNLNYEV 386
Query: 124 RYK---------DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCA 173
K DLL + + ++ IVYCL + C + + +L I CA
Sbjct: 387 IGKTKTPQKQLGDLLKERFMNM----------SGIVYCLSKNECADTAKFLREKYKIKCA 436
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGL + RS+V W S +V+ AT+AFGMGID+ DVR V H + KS+E++YQES
Sbjct: 437 HYHAGLAARQRSNVQGKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQES 496
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD LP+ ++ Y D R+ +L + + S+SF +KK M YC
Sbjct: 497 GRAGRDNLPAHCIVLYQKKDLGRIVCMLRNSGNFKSESFKVAMEQAKK-------MQTYC 549
Query: 294 E-GSGCRRKKILESFGEQIPVSLCKNSCDAC 323
E + CRR+ +L FGEQ CK+ C C
Sbjct: 550 ELKTECRRQTLLGHFGEQYDRQRCKHGCSPC 580
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 196/325 (60%), Gaps = 18/325 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+V+TKI DL +GK +RLL+V+PE GF+ +K R L+A+DEAHCIS WG
Sbjct: 93 RVRTKIEADLKNGK--IRLLFVSPERCMQAGFLDLIKAAPIR----LIAVDEAHCISEWG 146
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
H+FRP YR+L+ L+ P VP++ALTATA P+V++D+ + L + + SFNR NL Y
Sbjct: 147 HNFRPEYRQLAQLKKLFPAVPLVALTATAIPEVRRDICQQLGISDAHEFVGSFNRKNLMY 206
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K + L + L + I+YC+ + +E++ L G + AYHAGL+
Sbjct: 207 RVVEK---KNPKILLLTFLSRHQHESGIIYCMSKKETEEVARDLRRRGYNAQAYHAGLSK 263
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ V D +I + +V AT+AFGMGID+ DVR V H++IPK++E++YQE+GRAGRD
Sbjct: 264 QVRTKVQDGFIKNTITIVCATIAFGMGIDKPDVRFVIHYDIPKTVESYYQETGRAGRDGR 323
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
PS+ +L+Y D R+ +L + ER+ + S+ +M +YCE CRR+
Sbjct: 324 PSECVLFYSRGDIARVRSMLEHDHMT--------ERNLRASLRKLQEMTEYCEAITCRRR 375
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+L FGE+ P C SCD C HP
Sbjct: 376 FLLSYFGEESPDEHC-TSCDNCNHP 399
>gi|374853612|dbj|BAL56515.1| ATP-dependent DNA helicase RecQ [uncultured Bacteroidetes
bacterium]
Length = 717
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 186/310 (60%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F L ++ ++ VA+DEAHCIS WGHDFRP YR++
Sbjct: 107 VKLLYVAPETLLSESFAEVLAQLQ----ISFVAVDEAHCISEWGHDFRPEYRRIRHALRD 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
LP +PI+ALTATA P+VQ+D++E+L + + +V ++SFNRPNL+Y++ K ++
Sbjct: 163 LPPMPIIALTATATPRVQRDILENLEILDAVVFRTSFNRPNLYYQITPKRSHQATLKEIV 222
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ IVYC R ++++ L A GI YHAG++ R+ D +++ Q
Sbjct: 223 QYIRSRPGQAGIVYCHSRRRVEDVANILQANGIKALPYHAGMDAATRTRNQDAFLNEEIQ 282
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V HF++PKS+E +YQE+GRAGRD LP+ +LYY +D
Sbjct: 283 VIVATIAFGMGIDKPDVRFVIHFDVPKSIENYYQETGRAGRDGLPADCILYYDYND---- 338
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
IL ++ + S RE + +M +CE CRRK +L+ FGE C
Sbjct: 339 --ILKLDRFLKDKPASERE----AIVFLLQEMAYFCETGQCRRKFLLQYFGESYDTHKCN 392
Query: 318 NSCDACKHPN 327
CD C++P
Sbjct: 393 GMCDNCRYPK 402
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/324 (42%), Positives = 198/324 (61%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 779 IYRDLESHPPLVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 838
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P+VP +ALTATA P+V+ D++ L L SSFNR NL Y+V
Sbjct: 839 PDYKKLGILRKRFPNVPTMALTATATPRVRLDILSQLNLTQCKWFLSSFNRSNLRYKVLP 898
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ + +K+ ++ I+YCL R CD++S + GI AYHAGL+D R
Sbjct: 899 KKGAS-TLEDISAFIKSRPANSSGIIYCLSRKECDDVSQKMCKAGIRSVAYHAGLSDTER 957
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DWI S+ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD ++
Sbjct: 958 ESRQKDWILSKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDIAE 1017
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D R++ +L +++ N ++ + K I + ++V YCE + CRR +
Sbjct: 1018 CILYYNYSDMLRLKKMLDGDRALN---YNVK----KMHIDNLYRIVGYCENITDCRRAQQ 1070
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L+ FGE C K +CD C
Sbjct: 1071 LDYFGEHFTSEQCLENRKTACDNC 1094
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 195/324 (60%), Gaps = 22/324 (6%)
Query: 8 YEDLDSGKPSL-----RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
Y ++D+ + SL ++LY+ PE P F+ L+ + ++L AIDE+HCIS WGH
Sbjct: 89 YSEIDAKRQSLLNNEIKILYIAPERLFMPEFLQFLQGLK----ISLFAIDESHCISEWGH 144
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP YR+L L+ P VP++ALTATA P VQKD++ L L + + K+SFNR NL+Y+
Sbjct: 145 DFRPEYRQLEILKEKFPKVPVMALTATATPAVQKDIILQLKLSDCRIFKASFNRKNLYYQ 204
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
++ KD + Y + LK+ I+YC R T + L+ L A G YHAGL +
Sbjct: 205 IKPKD---NPYHQILHYLKSRKKDSGIIYCQSRKTVESLTTSLQAEGYRVLPYHAGLPAE 261
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R+ + +I +++VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 262 VRTENQERFIHDDVEIIVATIAFGMGIDKPDVRYVIHYDLPKSIEGYYQETGRAGRDGLK 321
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
S +L + D+ ++E+ + + +N + + ++ + +YCEG+ CRRK
Sbjct: 322 SDCILLFSYADKFKIEYFIHQKIDENEKLIAYKQ---------LRHLTNYCEGNICRRKL 372
Query: 303 ILESFGEQIPVSLCKNSCDACKHP 326
+L+ FGE+ C N+CD C P
Sbjct: 373 LLDYFGEKFDEPNC-NNCDVCLEP 395
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 197/332 (59%), Gaps = 17/332 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
++IY L P ++LLYVTPE L+A+ +S L+ ++ RGLL IDEAHC+S WGHD
Sbjct: 738 SRIYMQLSRKDPIIKLLYVTPEKLSASNRLISALQNLYERGLLARFIIDEAHCVSQWGHD 797
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y+KL LR P+V ++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 798 FRPDYKKLHELRQKFPNVAMMALTATATPRVQKDILNQLNMSRPQVFTMSFNRTNLKYAV 857
Query: 124 RYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K D S +K + IVYCL R CD ++ L G+S +YHAGL+D
Sbjct: 858 LPKK-PKKVDEDCTSWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAGLSALSYHAGLSDS 916
Query: 183 ARSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 917 DREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSMEGYYQESGRAGRDGE 976
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
S +L+Y D +R++ I+S ++ + + +T ++ MV +CE CRR
Sbjct: 977 ISHCILFYSYTDVQRIKRIISMDREGDRHTKATH-------YNNLHSMVHFCENVMECRR 1029
Query: 301 KKILESFGE-QIPVSLCKN----SCDACKHPN 327
++L FGE + + CK+ SCD C PN
Sbjct: 1030 IQLLAYFGELKFNRNFCKDHPDVSCDNCTKPN 1061
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 200/329 (60%), Gaps = 22/329 (6%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+L+Y++PE+ T + ++ +++ L V +DEAHC+SSWGHDFRP Y+ +S +
Sbjct: 835 LQLVYLSPEMVNTSQHIQRIIARLYESRQLARVVVDEAHCVSSWGHDFRPDYKGMSLFKQ 894
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK-----DLLDD 131
P VP++ALTATA KV+ D++ L + +P++LK SFNR NLFYE+++K D + D
Sbjct: 895 QFPQVPVIALTATANEKVRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAANFLDWIRD 954
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
+L + I+YC + +C+ + L+ G+ C+ YHAGL+ R + DW
Sbjct: 955 Y------ILTKQQNKTGIIYCHSKQSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQTDW 1008
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
+R QV+ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD LPS+ +++Y
Sbjct: 1009 QQNRIQVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMFYSY 1068
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKS-ISDFSQMVDYCEG-SGCRRKKILESFGE 309
D R ++ ++ ++ S +R K+S ++ Q+V YCE S CRRK++L F E
Sbjct: 1069 KDARSLQNMIQRD--------SELDREGKESHLAKLRQVVQYCENTSDCRRKQVLHYFNE 1120
Query: 310 QIPVSLCKNSCDACKHPNLLAKYLGELTS 338
+ + C CD C + N + ++T+
Sbjct: 1121 RFDPAHCARKCDNCLNNNSANAVIHDVTA 1149
>gi|414079433|ref|YP_007000857.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
gi|413972712|gb|AFW96800.1| ATP-dependent DNA helicase RecQ [Anabaena sp. 90]
Length = 729
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/318 (42%), Positives = 196/318 (61%), Gaps = 16/318 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + +GK ++LLYV PE + F+ L + + ++ AIDEAHC+S WGHDFRP Y
Sbjct: 103 EAIMNGK--IKLLYVAPERLVSERFLPLLDVVKEKVGISTFAIDEAHCVSEWGHDFRPEY 160
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R+L LR PDVP +ALTATA +V+ D++E L L+ P + +SFNR NL YEVR K
Sbjct: 161 RQLRLLRKRYPDVPTIALTATATDRVRADIIEQLGLKQPSIHIASFNRQNLHYEVRSKS- 219
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
+ AYA+L +++ N + I+YCL R DE++ L +S YHAGL+D+ RS
Sbjct: 220 -NRAYAELLEIVREN-EGSGIIYCLTRKKVDEITLKLQNDKVSVLPYHAGLSDEERSKNQ 277
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+I +V+VATVAFGMGI++ DVR V H ++P+++E++YQESGRAGRD PSK L+
Sbjct: 278 TRFIRDDVRVMVATVAFGMGINKPDVRFVVHSDLPRNLESYYQESGRAGRDDEPSKCTLF 337
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D + +E+ +++ Q + ++ Q++DY EG+ CRR L FG
Sbjct: 338 FNYGDIKTIEWSINQKPDPQEQLIAKQQ---------LRQVIDYAEGTDCRRTIQLSYFG 388
Query: 309 EQIPVSLCKNSCDACKHP 326
E+ P + C N CD C +P
Sbjct: 389 ERFPGN-CGN-CDNCLYP 404
>gi|313677434|ref|YP_004055430.1| ATP-dependent DNA helicase recQ [Marivirga tractuosa DSM 4126]
gi|312944132|gb|ADR23322.1| ATP-dependent DNA helicase RecQ [Marivirga tractuosa DSM 4126]
Length = 725
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 186/310 (60%), Gaps = 19/310 (6%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L+LLYV PE + LK+ + ++ AIDEAHCIS WGHDFRP YR++ S+
Sbjct: 111 NLKLLYVAPESLTKEENVEFLKQAN----ISFAAIDEAHCISEWGHDFRPEYRRIKSILQ 166
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
+ ++PI+ALTATA PKVQ D+ ++L ++ V KSSFNR NL+YEVR K+ A L
Sbjct: 167 QISNIPIIALTATATPKVQLDIQKNLNMEEANVFKSSFNRENLYYEVRPKN---QAKKQL 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L C ++YCL R +E++ +L+ G + A YHAGL R DD+++
Sbjct: 224 IRFLNERKGKCGVIYCLSRKKVEEIAEFLNVNGFNAAPYHAGLEGATRMKNQDDFLNEDV 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
++VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L L++Y +D +
Sbjct: 284 DIIVATIAFGMGIDKPDVRFVIHYDTPKSVEGYYQETGRAGRDGLVGDCLMFYSYNDILK 343
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+E K ++ E+ + K + +M Y E S CRRK++L FGE+ C
Sbjct: 344 LE--------KFNKDKPVTEKENAKLL--LEEMSSYAESSVCRRKQLLHYFGEEF-ADYC 392
Query: 317 KNSCDACKHP 326
CD C+HP
Sbjct: 393 -GKCDNCRHP 401
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/333 (40%), Positives = 200/333 (60%), Gaps = 21/333 (6%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 59
M+ IY DL+ P ++LLYVTPE ++++ F L + + ++ IDEAHC+S
Sbjct: 719 MEDTMAIYRDLEGHSPLVKLLYVTPEKISSSARFQDTLDHLSANNFISRFVIDEAHCVSQ 778
Query: 60 WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNL 119
WGHDFRP Y+KL LR P+VP +ALTATA P+V++D+++ L L + SSFNR NL
Sbjct: 779 WGHDFRPDYKKLGILRKRFPNVPTMALTATATPRVRQDILQQLNLTHCKWFLSSFNRSNL 838
Query: 120 FYEVRYK---DLLDDAYADLCSVLKANGDTCA-IVYCLERTTCDELSAYLSAGGISCAAY 175
++V K LD+ + S ++ T + I+YCL R CDE++ +SA GI AY
Sbjct: 839 RFQVLPKKGASTLDE----MRSFIQTRPITASGIIYCLSRKECDEVAHKMSAAGIRAVAY 894
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL D AR S DWI+++ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GR
Sbjct: 895 HAGLTDTARESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGR 954
Query: 236 AGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG 295
AGRD + +LYY D R++ ++ ++ + K I + ++V YCE
Sbjct: 955 AGRDGEIADCILYYNYSDMMRLKKMMDADR-------ALEYHVKKIHIDNLHRIVGYCEN 1007
Query: 296 -SGCRRKKILESFGEQIPVSLC----KNSCDAC 323
+ CRR + L+ FGE C + +CD C
Sbjct: 1008 ITDCRRAQQLDYFGEHFTSEQCLENRRTACDNC 1040
>gi|50557416|ref|XP_506116.1| YALI0F31977p [Yarrowia lipolytica]
gi|49651986|emb|CAG78930.1| YALI0F31977p [Yarrowia lipolytica CLIB122]
Length = 1300
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/348 (40%), Positives = 206/348 (59%), Gaps = 27/348 (7%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLYV+PE+ M + L K+H + L + IDEAHC+SSWGHDFRP Y+ L ++++
Sbjct: 601 IALLYVSPEMFQQSNIMQNTLHKLHEQNRLARIVIDEAHCVSSWGHDFRPDYKALVNVKS 660
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQ-NPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
LP VPI+ALTATA KV+ D+ CL+ N K SFNRPNL+YEVR K + +
Sbjct: 661 RLPGVPIMALTATANEKVRMDIQG--CLRPNRRFFKQSFNRPNLYYEVRLK--TKNFQQE 716
Query: 136 LCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
+ +L+ G T I+YC + C+ S +L GI YHAG+ + R+ V +W S
Sbjct: 717 ITDMLRGRYRGQT-GIIYCHSKKLCETTSEFLKEAGIKADFYHAGMETEQRTYVQGNWQS 775
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ QVV AT+AFGMGID+ DVR V H +P++ME +YQE+GRAGRD LPSK ++Y+ D
Sbjct: 776 GKIQVVCATIAFGMGIDKADVRYVIHCTVPRNMEGYYQETGRAGRDGLPSKCIVYFSQKD 835
Query: 254 RRRMEFILSKNQ-----SKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESF 307
R+M F ++ ++ K + + R+R+ + + +++YCE CRR ++L F
Sbjct: 836 ARQMLFNIANDEFLGENGKVDWALTQRQRTHHREL--MQGVINYCENRVDCRRVQVLRYF 893
Query: 308 GEQIPVSLCKNSCDACKHPNL----------LAKYLGELTSAVLQKNH 345
E LC+NSCD C++ + +AK + +L SA Q N
Sbjct: 894 NETFDPKLCRNSCDNCQYGHEYTRETRDVTDVAKNIIKLVSAATQDNQ 941
>gi|354566185|ref|ZP_08985358.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
gi|353546693|gb|EHC16141.1| ATP-dependent DNA helicase RecQ [Fischerella sp. JSC-11]
Length = 719
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 191/309 (61%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F+ L IH + ++ AIDEAHC+S WGHDFRP YR+L LR
Sbjct: 110 VKLLYVAPERLVSDRFLPFLDLIHHQVGISAFAIDEAHCVSEWGHDFRPEYRQLILLRKR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
DVP A TATA +V+ D+++ L LQNP + +SFNR NL+YEVR K +AYA+L
Sbjct: 170 YADVPTWAFTATATDRVRNDIIQQLGLQNPSIHIASFNRQNLYYEVRPKK--KNAYAELL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + + I+YCL R DE++ L +S YHAGL D+ R+ +I +
Sbjct: 228 ELIR-DSEGSGIIYCLTRKKVDEITFKLQHDQVSALPYHAGLTDEERTQNQTRFIRDDVR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V HF+IP+++E++YQESGRAGRD S+ L++ D + +
Sbjct: 287 VMVATIAFGMGINKPDVRFVIHFDIPRNLESYYQESGRAGRDGEASRCTLFFSYADVKII 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
EF++++ Q + ++ QM+DY EG+ CRR L FGE+ + C
Sbjct: 347 EFLINQKSEPQEQLIAKQQ---------LRQMIDYAEGTDCRRTIQLSYFGERF-LGNCD 396
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 397 N-CDNCRYP 404
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 193/327 (59%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L +P+L++LYVTPE ++A+P S L ++ R LL IDE HC+S WGHDFR
Sbjct: 602 IYRELSKKEPALKILYVTPEKISASPKLCSTLTNLYERELLARFVIDEVHCVSQWGHDFR 661
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++L LR+ P VP +ALTATA P+V+ D++ L + NP SSFNRPNL Y +
Sbjct: 662 PDYKRLRCLRDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLRYSIIA 721
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A + + K + C IVYCL R CD+ +A + GI +YHAGL+D
Sbjct: 722 KKGKNCSDEIVAMIMTKFK---NACGIVYCLSRKDCDDYAAQMKKNGIKALSYHAGLSDV 778
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+ WIS +V+ AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 779 QRSNCQGKWISDEIRVICATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGET 838
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRK 301
+ +L+Y D R+ +L + + + Q +T + + +MV +CE S CRR
Sbjct: 839 ADCILFYNYSDMHRIRKMLELD-NPSPQVINTH-------MDNLFKMVAFCENSTDCRRS 890
Query: 302 KILESFGEQIPVSLC----KNSCDACK 324
L FGE C +CD C+
Sbjct: 891 LQLNYFGEIFDRQQCIMNKITACDNCR 917
>gi|223940604|ref|ZP_03632448.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
gi|223890722|gb|EEF57239.1| ATP-dependent DNA helicase RecQ [bacterium Ellin514]
Length = 728
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 131/312 (41%), Positives = 188/312 (60%), Gaps = 17/312 (5%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K RLLYV PE GF+ L++ + +NL AIDEAHC+S WGHDFRP YR +S L
Sbjct: 112 KGEFRLLYVAPERLMLSGFLEDLRRWN----VNLFAIDEAHCVSEWGHDFRPEYRAISKL 167
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P+VP +ALTATA +V++D++ +L L+ P + +SFNRPNL Y V K AY
Sbjct: 168 RELFPEVPFMALTATATERVREDIIRALSLREPQIFVASFNRPNLTYRVHAKS---GAYE 224
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
S ++A IVYC R T + ++ L+ G+S YHAGL + RS + ++
Sbjct: 225 QTLSFIRARPRESGIVYCHSRKTAESVAQKLNEDGVSARPYHAGLPGEERSRNQELFLRD 284
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+VV AT+AFGMGI++ +VR V H+++PK++E +YQE+GRAGRD LPS+ LL + D
Sbjct: 285 EVRVVCATIAFGMGINKPNVRFVIHYDLPKNVEGYYQETGRAGRDGLPSECLLLFSPGDV 344
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+ +++ + Q + RE+ QMV Y E + CRR +L+ FGE+ PV+
Sbjct: 345 VKQTGFINEKTDPHEQQLA-REQ--------LQQMVHYAEIASCRRASLLDYFGEEFPVA 395
Query: 315 LCKNSCDACKHP 326
C+ +CD C P
Sbjct: 396 NCE-ACDNCLSP 406
>gi|396461165|ref|XP_003835194.1| similar to ATP-dependent DNA helicase recQ [Leptosphaeria maculans
JN3]
gi|312211745|emb|CBX91829.1| similar to ATP-dependent DNA helicase recQ [Leptosphaeria maculans
JN3]
Length = 518
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 210/359 (58%), Gaps = 34/359 (9%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I EDL G P RLLYVTPE F L+ IHS+ L +A+DEAHC+S WGHD
Sbjct: 119 RARIIEDLQCGHPLTRLLYVTPEFCQGDHFRKILRVIHSQRELARIAVDEAHCVSEWGHD 178
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFY 121
FRPS+++LS + PDVPI+ LTATA +V+ D++++L L Q + + + +RPNL Y
Sbjct: 179 FRPSFQQLSFFKKEFPDVPIICLTATATSRVRDDIIKTLALNPQKLRMFRMTTSRPNLHY 238
Query: 122 EVRYKDLLD-DAYADLCSVLKA---------------------NGDTCAIVYCLERTTCD 159
EVR+K + D Y D S LKA + + I+Y L R C+
Sbjct: 239 EVRFKSEENGDHYDDFLSWLKAAHARRADNAARASQLASTNQRSTNVAGIIYTLFRRDCE 298
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
L+A L A GI YHAGL+ R+ L W+++++ VVVAT AFGMGID+++VR V
Sbjct: 299 SLAARLRADGIGAVPYHAGLSHAERADALAGWVANKEGYDVVVATTAFGMGIDKENVRFV 358
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQS-FSTRE 276
H+ IPKS E FYQE+GRAGRD S +LYYG +DR R +L+++Q++ + S ++
Sbjct: 359 VHWQIPKSFEGFYQEAGRAGRDGKASVCILYYGREDRDRAANLLARDQARQAGGPASKKD 418
Query: 277 RSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
+ S + + + V +G R K L++ V C+ + DAC+H L+A+Y G+
Sbjct: 419 LHVRGSTAGYGEHVSAQQGMLQNRAKSLQAL-----VEYCERT-DACRH-GLIARYFGD 470
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/339 (40%), Positives = 202/339 (59%), Gaps = 14/339 (4%)
Query: 8 YEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
Y++L +++YVTPEL G F + L + RG L +DEAHC+S WGHDFRP
Sbjct: 131 YDELRKEPLPPKMIYVTPELVMRSGQFKTALNDLFRRGRLARFVVDEAHCVSQWGHDFRP 190
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y++LS+LR P VPI+ALTATA KV+ D+++ L + + SFNR NL Y+VR K
Sbjct: 191 DYKELSTLRVQYPTVPIIALTATANDKVKMDIIKVLNIPQCAKFQQSFNRSNLRYDVRKK 250
Query: 127 DLLDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
D DA D+ + +K + I+YC R C+ SA L GI A YHAGL+ + RS
Sbjct: 251 DKGLDA--DITAFIKTFYPNASGIIYCSSRKACEATSAKLCKLGIKAAFYHAGLDKEDRS 308
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ W ++ ++VAT+AFGMGID+ DVR V H++IP+S+E +YQE+GRAGRD S
Sbjct: 309 RIQTAWATNSVHIIVATIAFGMGIDKGDVRFVIHYSIPQSLEGYYQETGRAGRDGKDSMC 368
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKIL 304
+LYY D+ ++F++ + Q +ER ++ Q++ YCE CRR+++L
Sbjct: 369 ILYYAYKDKSTIDFLIENGEGNYEQ----KERQR----NNLRQIISYCENLVDCRRQQVL 420
Query: 305 ESFGEQIPVSLCKNSCDAC-KHPNLLAKYLGELTSAVLQ 342
FGE+ S C+ +CD C + K + E+T ++++
Sbjct: 421 AYFGERFDKSQCRQTCDNCQREGGATVKDITEITKSIIK 459
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 191/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ RGLL IDEAHC+S WGHD
Sbjct: 759 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERGLLARFVIDEAHCVSQWGHD 818
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 819 FRPDYKRMNILRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 878
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 879 LPKKPKKVAFDCLEWIRKYHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 938
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 939 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S +L+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 999 SHCILFYAYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1051
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE + CK SCD C
Sbjct: 1052 QLLAYFGENEFNPHFCKKYPDVSCDNC 1078
>gi|393212620|gb|EJC98120.1| ATP-dependent DNA helicase [Fomitiporia mediterranea MF3/22]
Length = 914
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 201/353 (56%), Gaps = 31/353 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K KI DL S P+ RLLY+TPE+ ++ F ++K+ RG LN + +DEAHCIS WGHD
Sbjct: 152 KKKIIADLRSSCPTTRLLYLTPEMLSSAEFNKVVEKLCRRGELNRLVVDEAHCISEWGHD 211
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSS--FNRPNLFY 121
FR YRKL S R PDVPI+ALTA+A VQ+D++ SL + +L+ + FNR NLFY
Sbjct: 212 FRSVYRKLGSFRENYPDVPIMALTASATKTVQEDIVNSLRMDRDRMLRVTHPFNRENLFY 271
Query: 122 EVRY------KDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAA 174
EVRY ++ + D + + + K G + IVYC R TCDEL+ YL G+S
Sbjct: 272 EVRYSTDMSQEERMVDVFQFISLLHKRRGRPSSGIVYCRLRATCDELARYLRCNGLSARP 331
Query: 175 YHAGLNDKARSSVLDDWISSRK-----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
YH GL + L +W VVVAT+AFGMGID+ DVR + H+++PKS+E +
Sbjct: 332 YHRGLKSRELDRTLQEWQEGGNGEGGCDVVVATIAFGMGIDKADVRYIVHYDLPKSLEGY 391
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSK--NQSKNSQS------FSTRERSSKK 281
YQE+GRAGRD P+K +LYY +D F + K N K +Q+ F E S++
Sbjct: 392 YQETGRAGRDGDPAKCVLYYTREDALAANFFVKKSYNDRKETQAAQMLPMFCAPE-PSQR 450
Query: 282 SISDFSQMVDYCEG-SGCRRKKILESFGEQIP-------VSLCKNSCDACKHP 326
+ FS +++ E CR I FGE I S C CD CK+P
Sbjct: 451 CLDSFSALINLAENIDVCRHISICRYFGELIDENDEAVRKSYCDRMCDVCKYP 503
>gi|255531959|ref|YP_003092331.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
gi|255344943|gb|ACU04269.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
Length = 729
Score = 258 bits (659), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 191/326 (58%), Gaps = 20/326 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ DL +G+ +LLYV PE + + LK I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TQVKSDLLNGQT--KLLYVAPESLSKQDNIDFLKLIK----ISFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + + L + +PI+ALTATA PKVQ+D++++L + + + KSSFNRPNLFYE+
Sbjct: 156 RPEYRKIRQVISGLGEGIPIIALTATATPKVQQDIIKNLGMSDATLFKSSFNRPNLFYEI 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K D ++ +K N I+YCL R +E++ L+ GI YHAGL K
Sbjct: 216 RPKR---DVLKEIIRYIKYNTGKSGIIYCLSRKKVEEVAESLNLNGIKALPYHAGLEPKV 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RAETQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E CRRK+I
Sbjct: 333 VCIAFYAQKDVDKL--------AKFMKDKPVSEREIGTQI--LKEVIDYAESGVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLL 329
L FGE + C CD CK P L
Sbjct: 383 LHYFGENFNETGCNCMCDNCKKPKKL 408
>gi|428778146|ref|YP_007169933.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
gi|428692425|gb|AFZ45719.1| ATP-dependent DNA helicase RecQ [Halothece sp. PCC 7418]
Length = 709
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 190/309 (61%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY+ PE +P + L+ + + L+L AIDEAHCIS WGHDFRP YR+L +LR+
Sbjct: 107 MKLLYLAPEKLVSPASKTFLQAVQEKHGLSLFAIDEAHCISEWGHDFRPEYRQLKTLRSL 166
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P +P++ALTATA +V+ D++ L L P V +SF+RPNL+YEV+ K Y L
Sbjct: 167 FPKIPMIALTATATERVRSDIIHQLTLDQPKVQITSFDRPNLYYEVQPKQ--RQHYNQLF 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++ + IVYCL R +E++ L GIS YHAG++D RS ++ Q
Sbjct: 225 KFIRHQTGS-GIVYCLSRRRVEEVAFRLKKDGISALPYHAGMSDGNRSDYQTRFLRDDVQ 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ D+R V H+++P+++E +YQE+GRAGRD P++ LL +G D +
Sbjct: 284 VMVATIAFGMGIDKPDIRFVVHYDLPRNLENYYQEAGRAGRDSEPAQCLLLFGAKDIHTI 343
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ +S+ + + SQ + ++ +++DY EG+ CRR L FGE + C
Sbjct: 344 EYFISQKEDEKSQRLARQQ---------LRKVIDYAEGTDCRRTIQLSYFGEHFAGN-CG 393
Query: 318 NSCDACKHP 326
N CD C +P
Sbjct: 394 N-CDNCLNP 401
>gi|300771774|ref|ZP_07081645.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
gi|300761160|gb|EFK57985.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
Length = 729
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 190/321 (59%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ +D+ GK +LLYV PE + + L++I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TKVKQDVTQGKT--KLLYVAPESLSKDENIEFLRQI----TVSFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + N + ++PI+ALTATA PKVQ D+ ++L + + + KSSFNR NL+YEV
Sbjct: 156 RPEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMTDATLFKSSFNRTNLYYEV 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ +K N IVYCL R +E++ L+ GI YHAGL+ K
Sbjct: 216 RTKK---NVVKEIVRFIKNNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYHAGLDAKT 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E + CRRK+I
Sbjct: 333 VCVTFYSEKDVEKL--------TKFMKDKPVSEREIGTQI--LKEVIDYSESAVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE + C N CD CK
Sbjct: 383 LHYFGENFDEAGCNNMCDNCK 403
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 193/327 (59%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ +++R LL IDEAHC+S WGHD
Sbjct: 759 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYNRKLLARFVIDEAHCVSQWGHD 818
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 819 FRPDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFTMSFNRHNLKYYV 878
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 879 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 938
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 939 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S+ LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 999 SQCLLFYTYHDVTRLKRLILMEKDGNHHTKETH-------FNNLYSMVHYCENIAECRRI 1051
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE + + CK SCD C
Sbjct: 1052 QLLAYFGENEFNPNFCKKYPDVSCDNC 1078
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 196/321 (61%), Gaps = 14/321 (4%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++LLYV PE F L I + ++ AIDEAHC+S WGHDFRP YR+L L
Sbjct: 107 KGKIKLLYVAPERLLNDKFTPFLDFIAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQL 166
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P VP+LALTATA +V++D++ L L+ P + +SFNRPNL Y+V++K+ +Y
Sbjct: 167 RQRYPQVPMLALTATATKRVREDIIHQLELKQPGIHITSFNRPNLDYDVQFKE--RRSYN 224
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L S ++ + IVYCL R + D+++ L GI YHAG+ D+AR+ + +I
Sbjct: 225 KLLSYIRQQKGS-GIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRD 283
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
QV+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P++ L++ + D
Sbjct: 284 DVQVMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDL 343
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+++E+++ + + Q + ++ Q+VDY EG+ CRR +L FGE+ +
Sbjct: 344 KKIEYLIDQKSTPQEQKIARQQ---------LRQVVDYAEGTECRRTIVLRYFGERFAGN 394
Query: 315 LCKNSCDACKHPNLLAKYLGE 335
K CD C+ P L + E
Sbjct: 395 CGK--CDNCRDPKPLEDWTIE 413
>gi|401626200|gb|EJS44156.1| sgs1p [Saccharomyces arboricola H-6]
Length = 1463
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 196/311 (63%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 786 LDLVYISPEMISASEQCKRAISRLYTDGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 845
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV+ K + ++
Sbjct: 846 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVKKK--TKNTIFEI 903
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+N + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 904 CDAVKSNFKNQTGIIYCHSKKSCEQTSAQMQKNGIKCAYYHAGMEPDERLSVQKAWQADE 963
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 964 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKYSYCITYFSFRDIR 1023
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1024 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1076
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1077 LCHKNCDNCRN 1087
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/321 (39%), Positives = 196/321 (61%), Gaps = 14/321 (4%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++LLYV PE F L + + ++ AIDEAHC+S WGHDFRP YR+L L
Sbjct: 107 KGKIKLLYVAPERLLNDKFTPFLDFLAEKIGVSFFAIDEAHCVSEWGHDFRPEYRQLKQL 166
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P VP+LALTATA +V++D++ L L+ P + +SFNRPNL Y+V++K+ +Y
Sbjct: 167 RQRYPQVPMLALTATATKRVREDIIHQLALKQPGIHITSFNRPNLDYDVQFKE--RRSYN 224
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L S ++ + IVYCL R + D+++ L GI YHAG+ D+AR+ + +I
Sbjct: 225 KLLSYIRQQKGS-GIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRD 283
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
QV+VAT+AFGMGI++ DVR V H+++P+++E +YQESGRAGRD P++ L++ + D
Sbjct: 284 DVQVMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDL 343
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+++E+++ + + Q + ++ Q+VDY EG+ CRR +L FGE+ +
Sbjct: 344 KKIEYLIDQKSTPQEQKIARQQ---------LRQVVDYAEGTECRRTIVLRYFGERFAGN 394
Query: 315 LCKNSCDACKHPNLLAKYLGE 335
K CD C+ P L + E
Sbjct: 395 CGK--CDNCRDPKPLEDWTIE 413
>gi|195129147|ref|XP_002009020.1| GI13816 [Drosophila mojavensis]
gi|193920629|gb|EDW19496.1| GI13816 [Drosophila mojavensis]
Length = 1052
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 210/373 (56%), Gaps = 18/373 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K +++ LY+TPE AT F L +H L A+DEAHC+S WGHD
Sbjct: 101 RERVIMDLRAIKTNIKFLYITPEQAATKFFQDLLHSLHKHKKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR PDV LALTATA+ +V++D+ + L L+ P+ S+ + R NL+Y+
Sbjct: 161 FRPDYLKLGDLRAKYPDVVWLALTATASKEVREDIYKQLRLRQPVAQFSTPSFRSNLYYD 220
Query: 123 VRYKDLLDDAYADLC----------SVLKANGDT---CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L S KA C I+YC R + ++ +S G
Sbjct: 221 IVYKNSIEDDFHHLATFAQHCLGDESEFKATPKAKRGCGIIYCRTRDQVERVAVGVSKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
+ AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 VGAVAYHAGLKTAERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N ++ ++ RE +++++ F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAQRARGRGDREMLTERALRQFERI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
VD+CE + CR K + FG+ P C CD CK P K L + S I
Sbjct: 400 VDFCEQTRCRHKLFADYFGD--PAPDCNAQCDVCKRPKQATKALETFQKLCMDATFKSDI 457
Query: 350 FISS-QDMTDGGQ 361
+ D+ +GG+
Sbjct: 458 SLQDCADLYEGGR 470
>gi|149276388|ref|ZP_01882532.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232908|gb|EDM38283.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 729
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 138/326 (42%), Positives = 189/326 (57%), Gaps = 20/326 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ DL SG+ +LLYV PE + LK I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TQVKSDLLSGQT--KLLYVAPESLGKQDNIEFLKLIK----ISFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYLP-DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + + L +PI+ALTATA PKVQ+D++++L + + + KSSFNRPNLFYE+
Sbjct: 156 RPEYRKIRQVISGLGVGIPIIALTATATPKVQQDIIKNLQMSDATLFKSSFNRPNLFYEI 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K D ++ +K N I+YCL R +E++ L+ GI YHAGL K
Sbjct: 216 RPKR---DVIKEIIRYIKYNTGKSGIIYCLSRKKVEEVAESLNLNGIKALPYHAGLEPKV 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E CRRK+I
Sbjct: 333 VCIAFYAQKDVDKL--------AKFMKDKPVSEREIGTQI--LKEVIDYAESGVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLL 329
L FGE + C CD CK P L
Sbjct: 383 LHYFGENFNETGCNCMCDNCKKPKQL 408
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 205/339 (60%), Gaps = 14/339 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSW 60
Q + + + GK L L+Y++PE+ A+ + +KK++ G L + +DEAHC+SSW
Sbjct: 555 QQRKQTFSLFSQGK--LDLIYISPEMIASSKQCKRVIKKLYQEGNLARIIVDEAHCVSSW 612
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y++L ++ P +P++ LTATA V++D++ +L L+NP+ LK SFNR NLF
Sbjct: 613 GHDFRPDYKELYFFKSEYPKIPMMVLTATANEHVRQDIVTNLRLRNPVFLKQSFNRTNLF 672
Query: 121 YEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
YEV KD D+ ++ +K + + I+YC + +C++++ L I C YHAG+
Sbjct: 673 YEVLRKD--KDSIDEMIDAIKYHFTEQSGIIYCHSKNSCEKVALQLQNNQIRCGYYHAGM 730
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R + DW ++ QV+ ATVAFGMGID+ DVR + HF +P+++E +YQE+GRAGRD
Sbjct: 731 DPDERMMIQRDWQRNKLQVICATVAFGMGIDKSDVRFIYHFTVPRTLEGYYQETGRAGRD 790
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
PS + YY M D R ++ ++ K+ S + + S +K +++ YCE C
Sbjct: 791 GKPSYCIGYYSMKDVRAIQKMIQKDSSLD-------KISREKHFDKLQEVMKYCENIKEC 843
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELT 337
RRK +L F E+ +LC +CD CK + ++ ++T
Sbjct: 844 RRKLVLSYFNEEFDRNLCHENCDNCKKCQDVVSHMEDIT 882
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 195/312 (62%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ ++ ++ +G L + +DEAHC+SSWGHDFRP Y++L+ +N
Sbjct: 445 LDLIYISPEMISASKQCKRAIQTLYQQGKLARIVVDEAHCVSSWGHDFRPDYKQLNFFKN 504
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA V+KD++++L L++PL LK SFNR NLFYEVR K D ++
Sbjct: 505 EYPNIPMMALTATANEHVRKDIIQNLQLRSPLFLKQSFNRINLFYEVRKK--TKDCMVEI 562
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+K I+YC + +C+++SAYL + I YHAG++ R + DW +++
Sbjct: 563 ADAIKFQFTGQSGIIYCHSKNSCEQVSAYLQSKQIRSGFYHAGMDANERLMIQQDWQANK 622
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD PS + YY D R
Sbjct: 623 LQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKPSYCITYYSFKDVR 682
Query: 256 RMEFILSKNQSKNSQSFSTRERSSK-KSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
++ ++ +++ +R++K K Q++ YC+ CRRK +L F E
Sbjct: 683 TIQKMIQRDKD--------LDRANKEKHFDKLQQVMSYCDNIHECRRKLVLSYFNEAFDP 734
Query: 314 SLCKNSCDACKH 325
C +CD C++
Sbjct: 735 VACDKNCDNCRN 746
>gi|291514588|emb|CBK63798.1| ATP-dependent DNA helicase RecQ [Alistipes shahii WAL 8301]
Length = 730
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 191/322 (59%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ +D+ GK +LLY PE ++ L+KI ++ AIDEAHCIS WGHDF
Sbjct: 104 AQVRQDVLDGKT--KLLYFAPESLTKEDNVAFLRKIK----VSFYAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YE+R
Sbjct: 158 RPEYRRIRPIINEIGSAPLIALTATATPKVQLDIQKNLGMSDASVFKSSFNRPNLYYEIR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +D D+ +K N I+YCL R +EL+ L A GI AYHAG++ R
Sbjct: 218 PKHNVDH---DIIRFIKQNEGKSGIIYCLSRKKVEELTELLVANGIRALAYHAGMDASTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ DD++ R +V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AANQDDFLMERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGY 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 335 CLTFYSYKDIQKLE--------KFMQGKPIAEQEIGKLL--LLETVSYAESSMCRRKTLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE C N CD C++P
Sbjct: 385 HYFGEDYTEDNCGN-CDNCRNP 405
>gi|432332157|ref|YP_007250300.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
gi|432138866|gb|AGB03793.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
Length = 611
Score = 258 bits (658), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 183/310 (59%), Gaps = 16/310 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+LRLL+++PE PGF+S L R L+AIDEAHCIS WGH+FRP YR+L+ ++
Sbjct: 106 NLRLLFISPEKCLQPGFLSSLATARVR----LIAIDEAHCISEWGHNFRPEYRQLARIKE 161
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA P V++D+ + L ++ SFNR NL Y V K + L
Sbjct: 162 VFPGIPLIALTATAIPGVRRDIRQQLKMECAREFTGSFNRKNLRYRVVPKK---NPLVFL 218
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L + + IVYCL R+ + ++ L G S AAYHAGL+ + R V + +I R
Sbjct: 219 ADYLGQHREESGIVYCLSRSETETVAGDLQQRGFSAAAYHAGLSRQERERVQESFIRDRV 278
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV ATVAFGMGID+ DVR V H+++PK++E +YQE+GRAGRD S+ +L Y D R
Sbjct: 279 QVVCATVAFGMGIDKPDVRFVIHYDLPKTLEGYYQETGRAGRDGQYSECVLLYSRGDYAR 338
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ +L + S K S++ M +YCE +GCRRK +L FGE P C
Sbjct: 339 IRSLLEQGDSGGQH--------LKVSLAKLRDMQEYCETTGCRRKFLLTYFGEDYPEENC 390
Query: 317 KNSCDACKHP 326
SCD C HP
Sbjct: 391 -GSCDTCDHP 399
>gi|443324439|ref|ZP_21053192.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
gi|442795958|gb|ELS05292.1| ATP-dependent DNA helicase RecQ [Xenococcus sp. PCC 7305]
Length = 709
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 134/318 (42%), Positives = 193/318 (60%), Gaps = 16/318 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + +GK ++LLYV PE T F S L ++ + LN +AIDEAHC+S WGHDFRP Y
Sbjct: 101 EAILAGK--IKLLYVAPERLLTEKFRSFLLRVANGLGLNAIAIDEAHCVSEWGHDFRPEY 158
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R+L LR+ P PI A TATA +VQ D+++ L L++ V +SFNRPNL YEV+ KD
Sbjct: 159 RQLKQLRSQFPQTPIFAFTATATKRVQDDIIQQLGLRDANVHLASFNRPNLHYEVKSKD- 217
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
++Y L ++ + IVYCL R +E++ L GI YHAGL + RS
Sbjct: 218 -KNSYYQLLKDIRRQSGS-GIVYCLSRRRVEEIALKLKHDGIDALPYHAGLEAEVRSHNQ 275
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
++ +V+VATVAFGMGI++ DVR V HF++P+S+E+FYQESGRAGRD +KS L+
Sbjct: 276 TRFLRDDARVIVATVAFGMGINKPDVRFVFHFDLPRSLESFYQESGRAGRDGETAKSTLF 335
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D +++++++ + N Q + ++ +Q++DY EG+ CRR IL FG
Sbjct: 336 FSFGDIKKVDYLIEQKPDPNEQRIARQQ---------LNQVIDYAEGTVCRRTIILRYFG 386
Query: 309 EQIPVSLCKNSCDACKHP 326
E+ + CD C P
Sbjct: 387 ERFGGDCGR--CDNCLEP 402
>gi|409195579|ref|ZP_11224242.1| putative ATP-dependent DNA helicase [Marinilabilia salmonicolor JCM
21150]
Length = 726
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 190/321 (59%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SGK RLLYV PE + LK++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKDDVISGKT--RLLYVAPESLTKEDNIQFLKQVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + + + D P++ALTATA PKVQ D+ ++L + N V KSSFNR NLFYEVR
Sbjct: 157 PEYRRIRPIISEIGDAPVIALTATATPKVQHDIQKNLGMLNAHVYKSSFNRANLFYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +A ++ +LK N AI+YCL R +EL+ L GI YHAG++ RS
Sbjct: 217 KV---NATREIIKILKENTGKSAIIYCLSRKKVEELAETLVVNGIKALPYHAGMDAATRS 273
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR+V H++IPKS+E +YQE+GRAGRD +
Sbjct: 274 GNQDKFLMEEIDVIVATIAFGMGIDKPDVRIVIHYDIPKSLEGYYQETGRAGRDGGEGRC 333
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 334 IAFYSYKDIQKLE--------KFMQGKPLAEQEIGKQL--LLETVAYAESSVCRRKMLLH 383
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C ++CD C HP
Sbjct: 384 YFGETYTEENC-STCDNCVHP 403
>gi|227540043|ref|ZP_03970092.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
gi|227240118|gb|EEI90133.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
Length = 729
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 189/321 (58%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ +D+ GK +LLYV PE + + L+ I ++ VA+DEAHCIS WGHDF
Sbjct: 102 TKVKQDVTQGKT--KLLYVAPESLSKEENIEFLRHI----TVSFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + N + ++PI+ALTATA PKVQ D+ ++L + + + KSSFNR NL+YEV
Sbjct: 156 RPEYRKIRQVINGIGENIPIIALTATATPKVQSDIRKNLQMTDATLFKSSFNRTNLYYEV 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ +K N IVYCL R +E++ L+ GI YHAGL+ K
Sbjct: 216 RTKK---NVVKEIVRFIKNNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYHAGLDAKT 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ +V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E + CRRK+I
Sbjct: 333 VCVTFYSEKDVEKL--------TKFMKDKPVSEREIGTQI--LKEVIDYSESAVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE + C N CD CK
Sbjct: 383 LHYFGENFDEAGCNNMCDNCK 403
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 142/313 (45%), Positives = 190/313 (60%), Gaps = 17/313 (5%)
Query: 17 SLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
SLRLLYVTPE + + M L ++S+ L + +DEAHC+S WGHDFRP Y +L +LR
Sbjct: 511 SLRLLYVTPEFIRQSNQAMELLDLLYSQKRLARIVVDEAHCVSQWGHDFRPHYTELGALR 570
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK--DLLDDAY 133
+ P VPI+ALTATA +V KDV L ++N L L SSFNRPNL Y+VR K L D
Sbjct: 571 DKYPQVPIMALTATANARVIKDVKSCLKMRNVLQLSSSFNRPNLEYQVRKKPKSKLIDEI 630
Query: 134 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
A +L ++ D C IVYC R +C+ ++ L GI+ YHA L RS V W +
Sbjct: 631 ASF--ILTSHKDECGIVYCFSRESCETVADDLKKHGITAHHYHAKLGKDDRSKVQQRWKN 688
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD L S +LYY D
Sbjct: 689 GEYKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGLDSVCILYYSWTD 748
Query: 254 RRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQ- 310
RRME +LS+ +S + + +SI +M +CE CRR ++L FGE
Sbjct: 749 VRRMENMMLSEEKS---------QEAIDRSIDSLREMQRFCENEIECRRVQVLRYFGESG 799
Query: 311 IPVSLCKNSCDAC 323
C+++CD C
Sbjct: 800 FTSEQCRSTCDNC 812
>gi|325103763|ref|YP_004273417.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
gi|324972611|gb|ADY51595.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
Length = 728
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 186/321 (57%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ ED+ SGK +LLYV PE + LK + ++ VA+DEAHCIS WGHDF
Sbjct: 102 NRVKEDVISGKT--KLLYVAPESLIKQENIDFLKSV----TVSFVAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ + N + D+PI+ALTATA PKVQ D+ ++L + N V KSSFNR NLFYEV
Sbjct: 156 RPEYRKIRQVVNNIREDIPIIALTATATPKVQTDIQKNLGMMNANVFKSSFNRGNLFYEV 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + + D+ +K N IVYCL R +E++ L GI YHAGL+ K
Sbjct: 216 RPKG---NVFKDIIKYIKNNPGKSGIVYCLSRKKVEEVANALEINGIRSLPYHAGLDAKV 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ V+VAT+AFGMGID+ DVR V H +IPKSME +YQE+GRAGRD
Sbjct: 273 RADTQDKFLMEEVDVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +Y D ++ +K + ER I +++DY E + CRRK+I
Sbjct: 333 YCIAFYSEKDVDKL--------AKFMKDKPVSEREIGTQI--LKEVIDYSESAVCRRKQI 382
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE + C CD C+
Sbjct: 383 LHYFGENFNEAGCGEMCDNCR 403
>gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
gi|19918649|gb|AAM07847.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
Length = 909
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 194/315 (61%), Gaps = 24/315 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L++LY+ PE PG ++ LKK G ++L AIDEAHCIS WGHDFRP YRKL LR+
Sbjct: 128 LKILYIAPERLMMPGTITFLKK----GKISLFAIDEAHCISEWGHDFRPEYRKLKLLRDP 183
Query: 78 ---LPDVPILALTATAAPKVQKDVMESLCLQ-NPL--VLKSSFNRPNLFYEVRYKDLLDD 131
PDVP++ALTATA +V+KD++ L L +P + +SFNR NL+YEVR K D
Sbjct: 184 KTGFPDVPVIALTATATGRVRKDIIVQLGLDLDPEKGLYVASFNRSNLYYEVRPKK---D 240
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
++++ L + I+YC R + L+ L+ G YHAGL+D RS + +
Sbjct: 241 TFSEITDYLLRHRGEAGIIYCQSRNNVETLTKKLNLAGFRALPYHAGLSDSERSRNQEMF 300
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
I ++VAT+AFGMGID+ +VR V H+++P+++E++YQE+GR GRD P + +L++
Sbjct: 301 IKDDVDIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSR 360
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
DR ++E+ +++ T E+ S+ QMV YCEG+ CRR+ +LE FGE++
Sbjct: 361 GDRFKIEYFIAQK---------TNEKEKDISLVQLRQMVAYCEGNKCRRQALLEYFGEEL 411
Query: 312 PVSLCKNSCDACKHP 326
S C N CD C P
Sbjct: 412 SAS-CGN-CDTCLRP 424
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 257 bits (657), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 199/327 (60%), Gaps = 21/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+ P ++LLYVTPE ++++ F L ++ + ++ IDEAHC+S WGHDFR
Sbjct: 650 IYRDLECHPPLVKLLYVTPEKISSSARFQDTLDQLSANNYISRFVIDEAHCVSQWGHDFR 709
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P+VP +ALTATA P+V++D+++ L L + SSFNR NL Y+V
Sbjct: 710 PDYKKLGILRKRFPNVPSMALTATATPRVRQDILQQLNLTHCKWFLSSFNRSNLRYQVLP 769
Query: 126 K---DLLDDAYADLCSVLKANGDTCA-IVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K LDD + S ++ T + I+YCL R CDE++ + A GI AYHAGL D
Sbjct: 770 KKGASTLDD----IRSFIQTRAVTASGIIYCLSRKECDEVAQKMCAVGIRAVAYHAGLTD 825
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR S DWI+++ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 826 AARESRQKDWITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGE 885
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
+ +LYY D R++ ++ ++ + + K I + ++V YCE + CRR
Sbjct: 886 IADCILYYNYSDMLRLKKMMDADR-------ALQYHVKKIHIDNLHRIVGYCENITDCRR 938
Query: 301 KKILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C + +CD C
Sbjct: 939 AQQLDYFGEHFTSEQCLENRRTACDNC 965
>gi|366993190|ref|XP_003676360.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
gi|342302226|emb|CCC69999.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
Length = 1344
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/311 (40%), Positives = 193/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + K+HS G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 681 LDLIYISPEMISASEQCKRAISKLHSDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKR 740
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PDVP++ALTATA+ +V+ D++ +L L++P+ LK SFNR NL+YEV+ K +A ++
Sbjct: 741 EYPDVPMIALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVKKK--TKNAIFEI 798
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+K + I+YC + +C++ S L GI CA YHAG+ R V W +
Sbjct: 799 IDSIKTKFRNQTGIIYCHSKNSCEQTSDKLQRQGIKCAFYHAGMEPDDRLKVQKAWQADE 858
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 859 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYFSFRDVR 918
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + Q + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 919 TMQTMIQKDENLDRQ-------NKEKHLNKLQQVMSYCDNMTDCRRKLVLSYFNEDFDSK 971
Query: 315 LCKNSCDACKH 325
LC +CD CK+
Sbjct: 972 LCHKNCDNCKN 982
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 257 bits (656), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 190/327 (58%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L P+L+LLYVTPE ++A+P F + L +++R LL IDEAHC+S WGHDFR
Sbjct: 696 IYRELSKKDPALKLLYVTPEKISASPKFCNILSSLYNRRLLARFVIDEAHCVSQWGHDFR 755
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++L+ LR P VP++ LTATA P+V+ D++ L + P SSFNRPNL Y +
Sbjct: 756 PDYKRLNCLRENYPKVPVIVLTATATPRVRSDILHQLRITTPKWFMSSFNRPNLRYSIIA 815
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ + + K + C IVYCL R CD+ + ++ I +YHAGL D
Sbjct: 816 KKGKNCSDEVIGMIKTKYK---NDCGIVYCLSRKDCDDYAMHMRKNSIKALSYHAGLTDN 872
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS + WIS +VV AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 873 NRSDIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGEN 932
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +L+Y D R+ ++ + S + K I + +MV +CE + CRR
Sbjct: 933 ADCILFYNYTDMHRIRKMIELDNSNPT--------IIKTHIDNLFKMVSFCENKTDCRRT 984
Query: 302 KILESFGEQIPVSLC----KNSCDACK 324
+ L FGE C SCD C+
Sbjct: 985 QQLNYFGEIFDREQCIANKVTSCDNCR 1011
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 198/311 (63%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ +K+++ L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 641 LDLVYISPEMMSASQQCKRAIKRLYETNKLARIVVDEAHCVSNWGHDFRPDYKELKLFKR 700
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA +VQ D++ +L ++NPL+LK SFNR NL Y +R K + ++
Sbjct: 701 EYPTIPLIALTATANEQVQLDIINNLGVRNPLLLKQSFNRTNLDYIIRTKS--KNTVNEI 758
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
CS LK + + I+YC + +C++++ +++ I A YHAG+ R + W +++
Sbjct: 759 CSSLKTDFKNQSGIIYCNSKISCEQVAQQIASQKIRTAFYHAGMTPSERLKIQKAWQNNQ 818
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF IP+++E +YQE+GRAGRD LP++ + Y+ D R
Sbjct: 819 VQVICATVAFGMGIDKPDVRFVIHFTIPRTLEGYYQETGRAGRDGLPAQCITYFSFKDVR 878
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ +++S N + + K + Q+V YC+ + CRR+++L+ F E I S
Sbjct: 879 SLQTMIQRDKSLNKE-------NKLKHLEKLQQVVSYCDNVTTCRRQQVLKYFNEDIDPS 931
Query: 315 LCKNSCDACKH 325
+C CD C++
Sbjct: 932 VCLKQCDNCRN 942
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 22/320 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+I +++ GK +++LY+ PE A+ GF + L+ + +L+A+DEAHCIS WGHDFR
Sbjct: 94 RIQKEIKEGK--VKILYIAPERMASNGFENFLQNLKP----SLIAVDEAHCISEWGHDFR 147
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L L++ P VPI+ALTATA KV++D++ L +NP + SSFNR NLF+ V
Sbjct: 148 PDYRNLRRLKDIFPGVPIMALTATATEKVRQDILNQLNFENPNIFISSFNRDNLFFRVIE 207
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +++ L +L+ I+YC R + L+ L + G S AYHAGL+ R
Sbjct: 208 KK---NSFEKLLKLLENRRKESVIIYCFSRKDTENLALNLRSEGFSALAYHAGLDSAKRK 264
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+D+I + ++VAT+AFGMGID+ DVR+V H+ PKS+E +YQE GRAGRD LP++
Sbjct: 265 KTQEDFIQDKINIIVATIAFGMGIDKPDVRMVVHYTFPKSLEGYYQEVGRAGRDGLPAEC 324
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y D R+ + ++ +N + + R+ +++DY + + CRR+ IL
Sbjct: 325 VMFYTFADARKHRYFINVMDDENLKRQTERK---------LQEVMDYADLNSCRRRHILS 375
Query: 306 SFGEQIPVSLCKNSCDACKH 325
FGE+ K +C C H
Sbjct: 376 YFGEKYE----KENCGGCDH 391
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 190/318 (59%), Gaps = 19/318 (5%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
DL GK +++LY+ PE A F+ L+++ ++L AIDE+HCIS WGHDFRP YR
Sbjct: 156 DLLEGK--IKILYIAPERLAMREFLQFLQELK----VSLFAIDESHCISEWGHDFRPEYR 209
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+L LR P P +ALTATA P VQKD++ L L + V +SFNR NLFY++ KD
Sbjct: 210 QLKMLREKFPKTPFMALTATATPSVQKDIVTQLKLTDYKVFNASFNRKNLFYQIIPKD-- 267
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+ Y + VLK I+YC R T + L+ L G YHAGL+ + R+ +
Sbjct: 268 -NPYHQILCVLKERKKESGIIYCQGRKTVESLAGSLQGEGYRALPYHAGLSAEMRTENQE 326
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I +++VAT+AFGMGID+ +VR V H+++PKS+E +YQE+GRAGRD L S +L +
Sbjct: 327 RFIREDIEIIVATIAFGMGIDKPNVRYVIHYDLPKSIEGYYQETGRAGRDGLKSDCILLF 386
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D+ ++E+ + + + +N + + + +V YCEG+ CRRK +L+ FGE
Sbjct: 387 SYADKIKIEYFIHQKEDENEK---------QAAYQQLKALVSYCEGNVCRRKILLDYFGE 437
Query: 310 QIPVSLCKNSCDACKHPN 327
+ C+N CD C +P
Sbjct: 438 KFTTHNCEN-CDTCLNPK 454
>gi|346225175|ref|ZP_08846317.1| putative ATP-dependent DNA helicase [Anaerophaga thermohalophila
DSM 12881]
Length = 726
Score = 257 bits (656), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 189/321 (58%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ SGK RLLYV PE + LK++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKEDVISGKT--RLLYVAPESLTKDENIQFLKQVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNLFYE+R
Sbjct: 157 PEYRRIRPIINEIGEAPLIALTATATPKVQHDIQKNLGMLDANVFKSSFNRPNLFYEIRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +A D+ VLK N I+YCL R +EL+ L GI YHAG++ RS
Sbjct: 217 KV---NATRDIIKVLKENPGKSVIIYCLSRKKVEELAETLVVNGIKALPYHAGMDAATRS 273
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR+V H++IPKS+E +YQE+GRAGRD +
Sbjct: 274 GNQDKFLMEDIDVIVATIAFGMGIDKPDVRMVIHYDIPKSLEGYYQETGRAGRDGGEGRC 333
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 334 IAFYSYKDIQKLE--------KFMQGKPLAEQEIGKQL--LLETVAYAESSLCRRKTLLH 383
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C SCD C +P
Sbjct: 384 YFGETYTEENC-GSCDNCINP 403
>gi|345485326|ref|XP_001600102.2| PREDICTED: ATP-dependent DNA helicase Q5 [Nasonia vitripennis]
Length = 1040
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/389 (36%), Positives = 219/389 (56%), Gaps = 23/389 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I D+ S KP ++LLYVTPEL T F L +I +L+ IDEAHC+S WGHDFRP
Sbjct: 108 IKTDMLSSKPKMKLLYVTPELCDTSTFQLMLSQIKP-NVLSYFVIDEAHCLSQWGHDFRP 166
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
SYRKL LR P+VPI+ALTATAA +V++D+ ++L +++P++ + R NLFY+V +
Sbjct: 167 SYRKLIELRKKRPEVPIIALTATAAKEVKEDIFKTLKMESPMIFSTPVFRTNLFYDVWFI 226
Query: 127 DLLDDAYADLCSV----LKANGDT-------CAIVYCLERTTCDELSAYLSAGGISCAAY 175
D + D + L L N D+ C I+YC ++ T + L+ LS+ GI +Y
Sbjct: 227 DAIPDPFEHLKKFINDSLGPNDDSVPKEKKNCGIIYCRKKETTETLARKLSSMGIPTLSY 286
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL K R V D W + V+ AT +FGMG+D+ VR V H+ +P+++ ++YQESGR
Sbjct: 287 HAGLKSKERMEVQDSWTNGVVPVIAATCSFGMGVDKGSVRFVAHWTVPQTIASYYQESGR 346
Query: 236 AGRDQLPSKSLLYYGMDDRRRMEFIL--SKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
AGRD S +Y+ ++ + F+ + + ++ + +R+ + + F Q+V+
Sbjct: 347 AGRDGKQSYCRVYFSREEFNAISFLCQNAAEEELSTSQYKSRQDYQQAKMKSFKQIVESF 406
Query: 294 EGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISS 353
G CR + FG+ PV CKN CD CK+ + + + + S+ NH+S+
Sbjct: 407 TGVKCRHALFSKYFGD--PVPQCKNRCDVCKNKDAVREKILHFESS----NHYSRPKNRK 460
Query: 354 QDMTDGG--QYSEF-WNRDDEASGSEEDI 379
+ + G +Y ++ D E SG E +
Sbjct: 461 EPLESFGMDKYDNVTYDSDSEGSGEREQL 489
>gi|389744568|gb|EIM85750.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 814
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 203/356 (57%), Gaps = 23/356 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+I EDL SG+PS RLLY+TPE +T L ++ LN + +DEAHCIS WGHDFR
Sbjct: 111 EIKEDLSSGEPSNRLLYITPERLSTGEIHRLLTVVYEANNLNRLVVDEAHCISEWGHDFR 170
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKSSFNRPNLFYEVR 124
YR+L + R P VPI+ALTA+A P VQ D+++SL + ++ L FNR NLFYEVR
Sbjct: 171 AEYRQLGAFRRKFPGVPIMALTASATPTVQDDIIKSLRMSEDHCKLVHPFNRSNLFYEVR 230
Query: 125 YKD------LLDDAYADLCSV-LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
Y ++D ++ + S+ + N + IVYC R TC+ELS +L G++ YH
Sbjct: 231 YHASNDTMVQMEDVFSYISSLHRRRNRPSSGIVYCRTRATCNELSHFLRGRGLNSKPYHK 290
Query: 178 GLNDKARSSVLDDWISSRK-----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
G+ A L DW+ +V AT+AFGMGID+ DVR + HF++PKS E +YQE
Sbjct: 291 GIKPDALDKTLTDWLKGGDGEEGIDIVCATIAFGMGIDKSDVRYIIHFDLPKSFEGYYQE 350
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRER--SSKKSISDFSQMV 290
+GRAGRD L +K +LY+ +D R++ +++K+QS + + S+++++ ++
Sbjct: 351 TGRAGRDDLAAKCVLYFSREDALRVKSLVAKSQSVRQITAESAHAPPPSQRAVNSLGSLI 410
Query: 291 DYCEGSG-CRRKKILESFGEQIPV-------SLCKNSCDACKHPNLLAKYLGELTS 338
+ E CR I FGE I + C CD CK+P K L+S
Sbjct: 411 KFAENVDICRHLLICRYFGEVIDANDTELVKTFCDGMCDVCKYPEKTKKRREALSS 466
>gi|260591259|ref|ZP_05856717.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
gi|260537124|gb|EEX19741.1| ATP-dependent DNA helicase RecQ [Prevotella veroralis F0319]
Length = 727
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 211/381 (55%), Gaps = 26/381 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ D+ SG+ +LLYV PE M+ LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 KVRADIVSGRT--KLLYVAPESLNKEENMAFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRYAIDTIGAAPVIALTATATDKVRTDIIRSLGIEDCAEFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KRSDDDTSKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGKEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y +D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 IVFYSKNDLKKLE--------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFI---SSQDMT 357
FGE+ P C CD C HP + + +L VLQ K +F Q ++ T
Sbjct: 387 YFGEEYPKDNC-CMCDNCLHPKKKIEAMNQLL-IVLQAVKALKENFRQEYVIDFVKGRAT 444
Query: 358 DGGQYSEFWNRDDEASGSEED 378
D + + DD +G +ED
Sbjct: 445 DDQKDHKHNELDDFGAGEDED 465
>gi|391330518|ref|XP_003739707.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Metaseiulus
occidentalis]
Length = 876
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 201/345 (58%), Gaps = 20/345 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K ++ DL S P +LLYVTPE AT GF+ + + LL +DEAHC+ WGHD
Sbjct: 99 KRRVRGDLMSMSPKTQLLYVTPEQIATEGFLEIARALDRLKLLKRFVVDEAHCVLEWGHD 158
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y KL R P VP ALTATA+ K ++ ++++L L+N +++S R NLFY+V
Sbjct: 159 FRPDYMKLGRARTEFPQVPWAALTATASKKDEEGIIDALKLRNVFKIRTSSFRKNLFYDV 218
Query: 124 RYKDLLD-DAYADLCSVL-----------KANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
Y++ L + +A L + K C IVYC R C ++++ L G++
Sbjct: 219 YYRETLHGEEFAHLAGFISDALGKGWEDEKPEKRGCGIVYCRTRQDCHDVASELQKLGVT 278
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL R+ V + W+ + + AT++FGMGID+ VR V H++ KS+++FYQ
Sbjct: 279 SGAYHAGLRPAERTEVQEGWMKGKYSTIAATISFGMGIDKATVRFVAHWSPSKSLKSFYQ 338
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFI--LSKNQSKNSQSFSTRERSSKKSISDFSQM 289
ESGRAGRD P++ +YY + D+R + F+ + N+SK+ + +++ S+ ++ +F +
Sbjct: 339 ESGRAGRDGKPARCRVYYSLKDKRSISFLIQMEANKSKSER----KKKHSEIAMKEFDSV 394
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLG 334
V E + CR K + FG++IP CK CD+C +P + K LG
Sbjct: 395 VSMFEANSCRHKVLCSEFGDKIPE--CKTQCDSCTNPKDVDKRLG 437
>gi|443476000|ref|ZP_21065927.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
gi|443019101|gb|ELS33248.1| ATP-dependent DNA helicase RecQ [Pseudanabaena biceps PCC 7429]
Length = 769
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 187/319 (58%), Gaps = 5/319 (1%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++L+YV PE F+ L + ++ + AIDEAHC+S WGHDFRP YR+LS LR
Sbjct: 136 AIKLIYVAPERLFAEQFIEFLNIVKNKIGIAGFAIDEAHCVSEWGHDFRPEYRQLSRLRQ 195
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
+ PDVP++ LTATA +V++D+++ L LQ P V +SFNR NL+YEV K + +Y +L
Sbjct: 196 FYPDVPVIGLTATATERVREDIIQQLDLQQPYVHVASFNRDNLYYEVVPKQGTEQSYVNL 255
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+K IVYCL R +E++ L GI+ YHAGL+ K R WI
Sbjct: 256 LQQIK-RMQGSGIVYCLSRKRVNEIAERLREDGIAAIPYHAGLSAKEREENQTRWIRDDV 314
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QV+VAT+AFGMGI++ DVR V H+++PK++E +YQESGRAGRD S L+ G D
Sbjct: 315 QVMVATIAFGMGINKPDVRFVIHYDLPKNIEGYYQESGRAGRDGEDSHCTLFLGYQDLET 374
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
++++++ Q + + E + + Q+VDY EG CRR +L FGE C
Sbjct: 375 IKYLIA--QKVDPHTNEPLEAEQRIAQQQLRQVVDYAEGLACRRTILLRYFGEHFSGD-C 431
Query: 317 KNSCDACKHPNLLAKYLGE 335
N CD C P + + E
Sbjct: 432 AN-CDNCLTPKPMEDWTVE 449
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 177/307 (57%), Gaps = 17/307 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
SL+LLY++PE P F+ LK ++L AIDEAHCIS WGH+FRP YRKLS +R
Sbjct: 110 SLKLLYISPERLVQPSFIEFLKSTR----ISLFAIDEAHCISQWGHEFRPEYRKLSIIRR 165
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
DVPI+ALTATA P V+ D++ L L NP V SFNR NL Y + K+ D L
Sbjct: 166 TFADVPIIALTATATPSVRSDIISELSLHNPAVFVGSFNRENLIYRIVKKE---DGEQQL 222
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
LK++ + IVYC + +L+ L G S YHA L R D ++
Sbjct: 223 VQFLKSHQNESGIVYCFSKRQVTDLARVLQKNGFSALPYHADLPKSVRHETQDRFLRDEV 282
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+++VATVAFGMGI++ DVR V HF++PK++E +YQE+GRAGRD P++ LL Y D R+
Sbjct: 283 RIIVATVAFGMGINKPDVRFVVHFDLPKNLEHYYQETGRAGRDGDPAECLLLYSRGDFRK 342
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+E+++ + + S R+ +MV YCE CRR +L FGE C
Sbjct: 343 IEYLIEQMAEGTERQVSLRK---------LHEMVGYCESRACRRAVLLTYFGESWDKPSC 393
Query: 317 KNSCDAC 323
N CD+C
Sbjct: 394 GN-CDSC 399
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 200/328 (60%), Gaps = 21/328 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P +++LYVTPE ++A+ +S ++ +++RGLL+ IDEAHC+S WGHDFR
Sbjct: 863 IYRQLCMRDPVVKMLYVTPEKISASQKLLSTMEHLYTRGLLSRFVIDEAHCVSQWGHDFR 922
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L LR P VP++ALTATA P+V+ D++ +L ++ P VL SSF+R NL + V
Sbjct: 923 PDYKRLCKLREKFPGVPMMALTATATPRVKTDILHALKMKKPQVLTSSFDRSNLMFRVEK 982
Query: 126 KD---LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K ++++ + S K IVYCL R C++++ LS GI + YHAG +DK
Sbjct: 983 KQPSKMIENITKLINSQFKGK---SGIVYCLSRNECEKVADDLSNAGIKASPYHAGQSDK 1039
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+V WI+ + +VV AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 1040 ERSTVQTRWINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEGYYQEAGRAGRDGGL 1099
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRK 301
+ +LY+ D R+ ++ KN ++K + + MV YC+ CRR
Sbjct: 1100 AHCVLYFSYQDVTRLRRMIEKN--------GDNYNATKVHVDNLYGMVQYCDNKADCRRV 1151
Query: 302 KILESFGEQ-IPVSLCK----NSCDACK 324
+L FGE ++C+ +CD C+
Sbjct: 1152 IMLSYFGETGYDRAICRRRRETACDNCQ 1179
>gi|73668704|ref|YP_304719.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
gi|72395866|gb|AAZ70139.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
Length = 881
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/332 (40%), Positives = 202/332 (60%), Gaps = 34/332 (10%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
VKT E+ L++LYV PE PG ++ LKK G ++L+AIDEAHCIS WGH
Sbjct: 102 VKTAFLEN------RLKVLYVAPERLMMPGTLAFLKK----GKVSLLAIDEAHCISEWGH 151
Query: 63 DFRPSYRKLSSLRNY---LPDVPILALTATAAPKVQKDVMESLCL-----QNPLVLKSSF 114
DFRP YRKL LR+ PD+PI+ALTATA +V++D++ L L + P V +SF
Sbjct: 152 DFRPEYRKLKLLRDPKTGFPDIPIIALTATATERVREDIISQLNLHLPPEKGPYV--ASF 209
Query: 115 NRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
NR NL+YEVR K + ++++ L+ + I+YC R + + L+ L+ G
Sbjct: 210 NRKNLYYEVRPKK---ETFSEITDYLRRHRGEAGIIYCQSRNSVEALTKKLNLAGFRALP 266
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL+D R+ + +I +++VAT+AFGMGID+ +VR V H+++P+++E++YQE+G
Sbjct: 267 YHAGLSDTERNRNQEMFIKDDVEIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETG 326
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
R GRD P + +L++ DR ++E+ +S+ T E+ S+ QMV YCE
Sbjct: 327 RGGRDGSPCECILFFSRGDRFKIEYFISQK---------TNEKEKDISLVQLRQMVAYCE 377
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHP 326
G+ CRR+ ++E FGE++ C N CD C P
Sbjct: 378 GNKCRRQTLMEYFGEELS-EPCGN-CDCCLTP 407
>gi|334121014|ref|ZP_08495090.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
gi|333455733|gb|EGK84376.1| ATP-dependent DNA helicase RecQ [Microcoleus vaginatus FGP-2]
Length = 731
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 191/306 (62%), Gaps = 14/306 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F+ L + ++ ++ AIDEAHC+S WGHDFRP YR++ +R+
Sbjct: 118 IKLLYVAPERLLGERFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDR 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PD+PI+ LTATA +V++D+++ L L+NP + +SFNRPNL+YEVR K ++A++
Sbjct: 178 YPDIPIMGLTATATERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKT--KHSFAEVL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++K G + I+YCL R DE++ L GI YHAG+ND R++ +I Q
Sbjct: 236 QIIKKKGGS-GIIYCLSRKKVDEVAYKLQQSGIQALPYHAGMNDVDRATNQTRFIRDDVQ 294
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++PK++E +YQESGRAGRD P+ L++G D + +
Sbjct: 295 VMVATIAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMI 354
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++I+ + Q + ++ ++++Y E + CRR L FG+ P + C
Sbjct: 355 DYIIEQKPDPQEQRIARQQ---------LRRVINYAESTDCRRTIQLSYFGDSFPGN-C- 403
Query: 318 NSCDAC 323
+CD C
Sbjct: 404 GTCDNC 409
>gi|261880042|ref|ZP_06006469.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
gi|270333282|gb|EFA44068.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
Length = 742
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 203/364 (55%), Gaps = 35/364 (9%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q T++ ED+ SGK +LLYV PE P + + ++ AIDEAHCIS WG
Sbjct: 99 QAITQVEEDVHSGKT--KLLYVAPESLNKPDNLEFFQSFR----ISFYAIDEAHCISEWG 152
Query: 62 HDFRPSYR-------KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSF 114
HDFRP YR K++S R PI+ALTATA KV+ D+ +SL + + KSSF
Sbjct: 153 HDFRPEYRNIRPTIDKIASSRGE-KRAPIIALTATATDKVRSDIKKSLGIVDARDFKSSF 211
Query: 115 NRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
NRPNL+YEVR K +DA + + LK + I+YCL R +ELS L G A
Sbjct: 212 NRPNLYYEVRQKASEEDADSQIIRFLKQHEGKSGIIYCLSRKKVEELSKKLQINGYKAAP 271
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL+ + R+ DD++ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+G
Sbjct: 272 YHAGLDTEVRTQTQDDFLREDIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETG 331
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDY 292
RAGRD + + +Y D +++E F+ + ++K IS + Y
Sbjct: 332 RAGRDGGEGRCIAFYSPKDLKKLE------------KFTDNKGEAEKEISRQLLEETKAY 379
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFS 347
E S CRRK +L FGE+ C+N CD CKHP + GE AVL+ K F
Sbjct: 380 AESSVCRRKFLLHYFGEEYTKENCEN-CDNCKHPQKTEE-AGEALLAVLKAIKAVKEEFD 437
Query: 348 QIFI 351
Q +I
Sbjct: 438 QSYI 441
>gi|383810866|ref|ZP_09966350.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356505|gb|EID34005.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
Length = 727
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/381 (39%), Positives = 211/381 (55%), Gaps = 26/381 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ D+ SG+ +LLYV PE M+ LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 KVRADIVSGRT--KLLYVAPESLNKEENMAFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRYAIDTIGAAPVIALTATATDKVRTDIIRSLGIEDCAEFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KRSDDDTSKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y +D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 IVFYSKNDLKKLE--------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFI---SSQDMT 357
FGE+ P C CD C HP + + +L VLQ K +F Q ++ T
Sbjct: 387 YFGEEYPKDNC-CMCDNCLHPKKKIEAMNQLL-IVLQAVKALKENFRQEYVIDFVKGRAT 444
Query: 358 DGGQYSEFWNRDDEASGSEED 378
D + + DD +G +ED
Sbjct: 445 DDQKDHKHNELDDFGAGEDED 465
>gi|21227319|ref|NP_633241.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
gi|20905673|gb|AAM30913.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
Length = 896
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 192/317 (60%), Gaps = 28/317 (8%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR-- 75
L++LY+ PE PG + LKK G ++L AIDEAHCIS WGHDFRP YRKL LR
Sbjct: 128 LKVLYIAPERLMMPGTFAFLKK----GKVSLFAIDEAHCISEWGHDFRPEYRKLKLLRDP 183
Query: 76 -NYLPDVPILALTATAAPKVQKDVMESLCL-----QNPLVLKSSFNRPNLFYEVRYKDLL 129
N PDVP++ALTATA +V+KD++ L L + P V +SFNR NL+YEVR K
Sbjct: 184 KNGFPDVPVIALTATATERVKKDIVSQLGLNIDPEKGPYV--ASFNRSNLYYEVRPKK-- 239
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D ++++ L + I+YC R + L+ L+ G YHAGL+D RS +
Sbjct: 240 -DTFSEITDYLLRHRGEAGIIYCQSRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQE 298
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I ++VAT+AFGMGI++ +VR V H+++P+++E++YQE+GR GRD P + +L++
Sbjct: 299 MFIRDDVDIIVATIAFGMGINKSNVRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFF 358
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
DR ++E+ +++ T E+ S+ QMV YCEG+ CRR+ ++E FGE
Sbjct: 359 SRGDRFKIEYFIAQK---------TNEKEKDISLVQLRQMVAYCEGNKCRRQTLMEYFGE 409
Query: 310 QIPVSLCKNSCDACKHP 326
++ C N CD C P
Sbjct: 410 ELSTP-CGN-CDTCLRP 424
>gi|344231853|gb|EGV63732.1| ATP-dependent DNA helicase [Candida tenuis ATCC 10573]
Length = 1031
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 193/312 (61%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ + + ++ K+++ LN V +DEAHCISSWGHDFRP Y+ +S R
Sbjct: 451 LDLVYLSPEMVNSSAQIQRIIKQLYDTKQLNKVIVDEAHCISSWGHDFRPDYKAMSIFRQ 510
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD--LLDDAYA 134
PD+PI+ALTATA KV+ D++ L +++P V K SFNR NL+YE+R K ++D
Sbjct: 511 NYPDIPIMALTATANDKVRLDILHLLNMKSPKVFKQSFNRINLYYEIRMKKAGFVEDIRD 570
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
++L + I+YC + +C+++S L+ GI A YHAG++ + R V D W
Sbjct: 571 ---TILAKYKNQTGIIYCHSKQSCEQISMKLNQFGIESAFYHAGMSTEDRFEVQDSWQQE 627
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R +V+ AT+AFGMGID+ +VR V H +P+++E +YQE+GRAGRD L S ++YY D
Sbjct: 628 RLRVICATIAFGMGIDKPNVRFVIHSFLPRNLEGYYQETGRAGRDGLHSDCIMYYSYKDA 687
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPV 313
R ++ ++ K++ N + + +S Q++ YCE + CRR+++L+ F E
Sbjct: 688 RNLQLMIQKDEEYN-------QATKDNHLSKLRQVIQYCENNHDCRRRQVLQYFNENFDP 740
Query: 314 SLCKNSCDACKH 325
C+ CD+C +
Sbjct: 741 KDCQKQCDSCNN 752
>gi|169603998|ref|XP_001795420.1| hypothetical protein SNOG_05008 [Phaeosphaeria nodorum SN15]
gi|160706490|gb|EAT87399.2| hypothetical protein SNOG_05008 [Phaeosphaeria nodorum SN15]
Length = 413
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/346 (40%), Positives = 199/346 (57%), Gaps = 29/346 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I EDL G P RLLYVTPE F L+ IHS+ L +A+DEAHC+S WGHD
Sbjct: 39 RRRILEDLQCGHPLTRLLYVTPEFCQGDQFRRILRVIHSQKELARIAVDEAHCVSEWGHD 98
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV--LKSSFNRPNLFY 121
FRPS+++LS + PDVPI+ LTATA +V+ D++++L L + + + +RPNL Y
Sbjct: 99 FRPSFQQLSFFKEEFPDVPIICLTATATARVRDDIIKTLALDTTKLKMFRMTTSRPNLHY 158
Query: 122 EVRYKDLLDDAYADLCSVLK-------ANGDTCA-----------IVYCLERTTCDELSA 163
E+R+K+ +D Y D LK AN + A I+Y L R C+ L+A
Sbjct: 159 EIRFKNDQEDQYPDFLRWLKAAHARRAANPERLATQNQRADNVPGIIYTLFRKDCESLAA 218
Query: 164 YLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVCHFN 221
L + GI YHAGL R+ L+ W++++ VVVAT AFGMGID+++VR V H+
Sbjct: 219 RLRSDGIGAKPYHAGLPHAERADALEGWVANKAGYDVVVATTAFGMGIDKENVRFVAHWQ 278
Query: 222 IPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKK 281
+PKS E FYQE+GRAGRD S +LYYG +DR R +++++ ++ + T + +
Sbjct: 279 LPKSFEGFYQEAGRAGRDGKASVCMLYYGREDRDRAGQMMARDHARQPKG-GTMQVQLQH 337
Query: 282 SISDFSQMVDYCEGSG-CRRKKILESFG--EQIPVSLCKNSCDACK 324
+ +V YCE + CR K I F E P C +CD CK
Sbjct: 338 RQNSLVALVKYCEATNVCRHKLIARYFADDENPP---CDYACDWCK 380
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 195/312 (62%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + K+H G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 695 LDLIYISPEMISASEQCKRAIAKLHEDGNLARIVVDEAHCVSNWGHDFRPDYKELKFFKG 754
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYA 134
P++P++ALTATA+ +V+ D++ +L L++P+ LK SFNR NL+YE+ + K+ + +
Sbjct: 755 EYPNIPMMALTATASEQVRMDIIHNLKLKDPVFLKQSFNRTNLYYEIIKKSKNTIFEMSD 814
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
D+ + + I+YC + +C++ SA + GI CA YHAG+ R V W +
Sbjct: 815 DIKRRFR---NQTGIIYCHSKNSCEQTSAQMERAGIKCAYYHAGMEPDDRLKVQKAWQAD 871
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + YY D
Sbjct: 872 EVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCITYYSFKDV 931
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
R ++ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F EQ
Sbjct: 932 RTIQTMIQKDENLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEQFDS 984
Query: 314 SLCKNSCDACKH 325
LCK +CD C++
Sbjct: 985 KLCKKNCDNCRN 996
>gi|242008765|ref|XP_002425170.1| DNA helicase recq5, putative [Pediculus humanus corporis]
gi|212508872|gb|EEB12432.1| DNA helicase recq5, putative [Pediculus humanus corporis]
Length = 853
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/387 (36%), Positives = 220/387 (56%), Gaps = 19/387 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+T L + K + L YV PE + F+S L ++S+ +++ +DEAHCIS WGHD
Sbjct: 98 RTATINGLKAVKCDISLFYVAPEQIKSATFLSLLTYLYSKKMISYFVVDEAHCISQWGHD 157
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYE 122
FR Y KL SLR P +P +ALTATA+ +V+KD++ +L L P K R NL+Y+
Sbjct: 158 FRSEYLKLGSLRIKFPGIPYIALTATASCEVEKDIINNLKLNRPFGKFKVPCFRKNLYYD 217
Query: 123 VRYKDLLDD------AYADLCSVLKANGDT-----CAIVYCLERTTCDELSAYLSAGGIS 171
V ++D+LDD + D C + + I+YC R + +++ L G++
Sbjct: 218 VVFRDILDDDVEHLKTFIDKCLAQTSKTEKKSMLPSGIIYCRTRESTEDIVKLLLKKGLT 277
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL+DK R V +DW+S + V+ ATV+FGMGID+ VR V H+ +P+S+ A+YQ
Sbjct: 278 IQAYHAGLSDKQRIQVQNDWMSGKCPVISATVSFGMGIDKAAVRFVVHWGMPQSVAAYYQ 337
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD LPS +YY +R R++FIL K +++ +++ E+ +K + + +MV
Sbjct: 338 ESGRAGRDGLPSLCRIYYSKIERDRVDFIL-KTEARKAKTEDKVEK-AKLAYKSYERMVR 395
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFI 351
YCE CR E FG+ P CK +CD CK ++ + E + + Q +++ I
Sbjct: 396 YCEEVKCRHSVFAEYFGDDKPP--CKKNCDVCKDSKTISDQINEFQTKISQYGS-TKLHI 452
Query: 352 SSQD--MTDGGQYSEFWNRDDEASGSE 376
+ D + GG+ + DD S ++
Sbjct: 453 TEDDGELYGGGKQGQRLEADDYFSSAD 479
>gi|428302021|ref|YP_007140327.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
gi|428238565|gb|AFZ04355.1| ATP-dependent DNA helicase RecQ [Calothrix sp. PCC 6303]
Length = 724
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 198/309 (64%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++L+YV PE + F+ L ++ + + AIDEAHC+S WGHDFRP YR+L +LR
Sbjct: 110 VKLVYVAPERLVSERFLPFLDLVNHQVGIAGFAIDEAHCVSEWGHDFRPEYRQLITLRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+P+ ALTATA +V+ D++E L LQ P + +SFNR NL+YEVR K YA++
Sbjct: 170 YSGIPLFALTATATDRVRADIIEQLGLQEPSIHIASFNRQNLYYEVRPKT--KTVYAEVL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ + + I+YCL R DEL+ L IS AYHAGL+D+ R++ +I +
Sbjct: 228 ELIRES-EASTIIYCLTRKQVDELTFKLQHDKISALAYHAGLSDEERTNNQTRFIRDDVR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVRLV H+N+P+++E +YQESGRAGRD PS+ +++G+ D + +
Sbjct: 287 VMVATVAFGMGIDKPDVRLVIHYNLPRNIEGYYQESGRAGRDGEPSRCTMFFGVGDIKTI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+ S NQ +SQ + +K+ + Q++D+ EG+ CRR L FGE+ + C
Sbjct: 347 EW--SINQKTDSQE----QLIAKQQL---RQVIDFAEGTDCRRTIQLGYFGERF-LGNCG 396
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 397 N-CDNCRYP 404
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 144/347 (41%), Positives = 198/347 (57%), Gaps = 23/347 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ GK +LLYV PE ++ LK I ++ AIDEAHCIS WGHDFRP YR
Sbjct: 107 DIRVGKT--KLLYVAPESLNKEDNIAFLKTIK----VSFYAIDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + + + PI+ALTATA KV+ D++ SL ++ L KSSFNRPNL+YEVR+K
Sbjct: 161 KIRTAIDEIGKAPIIALTATATDKVRTDIVRSLGIEGCLEFKSSFNRPNLYYEVRFKKNE 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
DD + +K + I+YCL R +EL+A L A I AAYHAGL+ + RS D
Sbjct: 221 DDTNKQIIRFIKQHSGKSGIIYCLSRKKVEELAAILIANDIKAAAYHAGLDSETRSKTQD 280
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + +Y
Sbjct: 281 QFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICIAFY 340
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
+D +++E K + E+ + + + Y E S CRRK +L FGE
Sbjct: 341 SRNDLKKLE--------KFMEGKPIAEQDIGRQL--LQETEAYAESSVCRRKLLLHYFGE 390
Query: 310 QIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFI 351
+ P C CD C++P L + L VLQ K +F Q +I
Sbjct: 391 EYPKDNC-GMCDNCRNPKTLIEAKDPL-KIVLQAIKELKENFRQEYI 435
>gi|395330800|gb|EJF63182.1| ATP-dependent DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 805
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 27/356 (7%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
+DL S +PS+RLLY++PE + L ++ + LN + +DEAHCIS WGHDFR Y
Sbjct: 96 QDLRSDEPSIRLLYISPEKYCSTEIRHLLNGLYEKDALNRLVVDEAHCISEWGHDFREEY 155
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFYEVRYK 126
R+L S R+ P++PI+ALTATA VQ+DV+ +L + + V FNR NLFYEVRY+
Sbjct: 156 RRLGSFRDKYPNIPIMALTATATDTVQQDVIRTLKMSAKRLFVAVHPFNRANLFYEVRYQ 215
Query: 127 D------LLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
+ D Y + ++ + G + IVYC R CDEL+ +LS GI AYH GL
Sbjct: 216 SNPNPTAHMMDVYEYIENLHRRRGRASSGIVYCRTRALCDELALFLSKKGIQAKAYHRGL 275
Query: 180 NDKARSSVLDDW------ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
++ L DW + VV AT+AFGMGID+ DVR V HFN+PKS+E +YQE+
Sbjct: 276 SNAVLDKTLKDWDAGGNGVPGGVDVVCATIAFGMGIDKADVRYVLHFNLPKSIEGYYQET 335
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSK---NSQSFSTRERSSKKSISDFSQMV 290
GRAGRD LP+K +L+Y +D R++ +S + SK ++S + E S+++ S ++
Sbjct: 336 GRAGRDGLPAKCILFYSREDAARVKQFVSDSHSKRVVRAESGNGPE-PSQRAADSVSALL 394
Query: 291 DYCEGSG-CRRKKILESFGEQIPV-------SLCKNSCDACKHPNLLAKYLGELTS 338
D+ E CR I FGE+I + C CD CK+P+ K L+S
Sbjct: 395 DFAENVNICRHVLICRYFGEKIDLRDPEVTKQYCSQMCDVCKYPDKARKRKLHLSS 450
>gi|334366676|ref|ZP_08515601.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
gi|313157180|gb|EFR56610.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
Length = 730
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 189/322 (58%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ D+ SGK +LLY PE ++ L KI ++ AIDEAHCIS WGHDF
Sbjct: 104 AQVRADVLSGKT--KLLYFAPESLTKEDNVAFLHKIK----VSFYAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YE+R
Sbjct: 158 RPEYRRIRPIINEIGPAPLIALTATATPKVQLDIQKNLGMSDASVFKSSFNRPNLYYEIR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +D D+ +K N I+YCL R +EL+ L A GI AYHAG++ R
Sbjct: 218 PKHNVD---RDIIRFIKQNEGKSGIIYCLSRKKVEELTELLVANGIKALAYHAGMDAATR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ D ++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AANQDHFLMERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGY 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 335 CLTFYSYKDIQKLE--------KFMQGKPIAEQEIGKLL--LQETVSYAESSMCRRKTLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C++P
Sbjct: 385 HYFGEEYTEENCGN-CDNCRNP 405
>gi|308462738|ref|XP_003093650.1| CRE-HIM-6 protein [Caenorhabditis remanei]
gi|308249588|gb|EFO93540.1| CRE-HIM-6 protein [Caenorhabditis remanei]
Length = 1039
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 199/348 (57%), Gaps = 43/348 (12%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL S P+++LLYVTPE ++A+ +S +H RGLL IDEAHC+S WGHDFR
Sbjct: 363 IYSDLTSENPTIKLLYVTPEKISASGRLISVFYTLHRRGLLARFVIDEAHCVSQWGHDFR 422
Query: 66 PSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
P Y KLS+LR P VPI+ALTATA PK+ D ++L +QN + SSF R NL Y
Sbjct: 423 PDYTKLSTLREKFHNPPVPIIALTATATPKIVTDARDNLKMQNSKLFISSFVRDNLKY-- 480
Query: 124 RYKDLLDDAYADLCSVLKANGD----TCAIVYCLER-------------------TTCDE 160
DL+ A L +V++ IVYCL R C+
Sbjct: 481 ---DLIPKAAKSLINVVEKMKQLYPGKSGIVYCLSRYKILQKKRQKIYLTLAFFRKECET 537
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHF 220
+ L+ G+S YHAGLND R SV W++++ V+ AT+AFGMGID+ DVR V H+
Sbjct: 538 VQMMLTKAGLSAEVYHAGLNDGLRVSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHY 597
Query: 221 NIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSK 280
++PKS+E +YQE+GRAGRD +PS L+ Y D R+ ++ + + +T RS
Sbjct: 598 SLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNT------TTGVRS-- 649
Query: 281 KSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNS---CDACK 324
+++ Q+V YCE S CRRK ++E FGE C+NS CD C+
Sbjct: 650 MHLNNVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNSKTPCDVCE 697
>gi|452209801|ref|YP_007489915.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
gi|452099703|gb|AGF96643.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
Length = 876
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 192/317 (60%), Gaps = 28/317 (8%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR-- 75
L++LY+ PE PG + LKK G ++L AIDEAHCIS WGHDFRP YRKL LR
Sbjct: 108 LKVLYIAPERLMMPGTFAFLKK----GKVSLFAIDEAHCISEWGHDFRPEYRKLKLLRDP 163
Query: 76 -NYLPDVPILALTATAAPKVQKDVMESLCL-----QNPLVLKSSFNRPNLFYEVRYKDLL 129
N PDVP++ALTATA +V+KD++ L L + P V +SFNR NL+YEVR K
Sbjct: 164 KNGFPDVPVIALTATATERVKKDIVSQLGLNIDPEKGPYV--ASFNRSNLYYEVRPKK-- 219
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D ++++ L + I+YC R + L+ L+ G YHAGL+D RS +
Sbjct: 220 -DTFSEITDYLLRHRGEAGIIYCQSRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQE 278
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+I ++VAT+AFGMGI++ +VR V H+++P+++E++YQE+GR GRD P + +L++
Sbjct: 279 MFIRDDVDIIVATIAFGMGINKSNVRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFF 338
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
DR ++E+ +++ T E+ S+ QMV YCEG+ CRR+ ++E FGE
Sbjct: 339 SRGDRFKIEYFIAQK---------TNEKEKDISLVQLRQMVAYCEGNKCRRQTLMEYFGE 389
Query: 310 QIPVSLCKNSCDACKHP 326
++ C N CD C P
Sbjct: 390 ELSTP-CGN-CDTCLRP 404
>gi|428781470|ref|YP_007173256.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
gi|428695749|gb|AFZ51899.1| ATP-dependent DNA helicase RecQ [Dactylococcopsis salina PCC 8305]
Length = 713
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 193/319 (60%), Gaps = 14/319 (4%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LLY+ PE + G L+ + + L+L A+DEAHCIS WGHDFRP YR+L +LR
Sbjct: 108 NIKLLYLAPEKLVSSGAKKFLQAVSEKQGLSLFAVDEAHCISEWGHDFRPEYRQLETLRQ 167
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VP +ALTATA +V+ D++ L L+ P + +SF+RPNL+YEV+ K Y L
Sbjct: 168 QFPEVPTIALTATATEQVRGDIIRQLKLKPPKIQITSFDRPNLYYEVQPKQ--RQHYNQL 225
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + IVYCL R +E++ L GIS YHAG+ D R ++
Sbjct: 226 FKFIR-HQNGSGIVYCLSRRRVEEVAFRLEKDGISALPYHAGMTDGNRRDYQTRFLRDDV 284
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QV+VAT+AFGMGID+ D+R V H+++P+++E +YQE+GRAGRD P++ LL +G D
Sbjct: 285 QVMVATIAFGMGIDKPDIRFVAHYDLPRNLENYYQEAGRAGRDNEPAQCLLLFGAKDIHT 344
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+E+++S+ + + SQ + ++ +M+DY EG+ CRR L FGE + C
Sbjct: 345 IEYLISQKEEEKSQRLARQQ---------LRKMIDYAEGTDCRRTIQLSYFGEHFAGN-C 394
Query: 317 KNSCDACKHPNLLAKYLGE 335
N CD C +P + + E
Sbjct: 395 GN-CDNCLNPKPIEDWTVE 412
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 194/327 (59%), Gaps = 14/327 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ KIY DL S KP L+LLYVTPE ++ G F + L +++ L IDEAHC+S+WGH
Sbjct: 775 QQKIYADLSSPKPVLKLLYVTPEKISSSGRFQNILTELYRMKQLGRFVIDEAHCVSAWGH 834
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKSSFNRPNLFY 121
DFRP Y+KLS LR P +P++ALTATA P+V+ DV++ L L +N SFNRPNL Y
Sbjct: 835 DFRPDYKKLSVLREQFPTIPVMALTATANPRVRIDVLKQLGLGRNTKWFLCSFNRPNLKY 894
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+R K + + + K IVYCL + CD+LSA + GI +YHAGL D
Sbjct: 895 IIRPKQGVATKAEIMELIKKKFPRATGIVYCLSKKDCDQLSAEMRCAGIKAKSYHAGLGD 954
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R + DWI+ + +VV AT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD
Sbjct: 955 AEREATQKDWITDKIKVVCATIAFGMGIDKPDVRYVIHHSMPKSIEGYYQEAGRAGRDGE 1014
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
+ +L+Y D R ++ + +S F ++ + + +MV+YCE + CRR
Sbjct: 1015 LATCVLFYNYSDMLRYRKMMDHD---SSIPFEAKQ----VHLHNLFRMVNYCENVADCRR 1067
Query: 301 KKILESFGEQIPVSLC----KNSCDAC 323
+ L+ F E C ++CD C
Sbjct: 1068 TQQLDYFAEHFTREQCLENRASACDNC 1094
>gi|428320783|ref|YP_007118665.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
gi|428244463|gb|AFZ10249.1| ATP-dependent DNA helicase RecQ [Oscillatoria nigro-viridis PCC
7112]
Length = 731
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 121/306 (39%), Positives = 193/306 (63%), Gaps = 14/306 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F+ L + ++ ++ AIDEAHC+S WGHDFRP YR++ +R+
Sbjct: 118 IKLLYVAPERLLGERFLPFLDIVANKLGISAFAIDEAHCVSEWGHDFRPEYRQMQRVRDR 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PD+PI+ALTATA +V++D+++ L L+NP + +SFNRPNL+YEVR K ++A++
Sbjct: 178 YPDIPIMALTATATERVRQDIIQQLTLRNPYIHVASFNRPNLYYEVRPKT--KHSFAEVL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ G + I+YCL R +E++ L GI+ YHAG+ND R++ +I Q
Sbjct: 236 QIIQKKGGS-GIIYCLSRKKVEEVAYKLQQSGIAALPYHAGMNDVDRATNQTRFIRDDVQ 294
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++PK++E +YQESGRAGRD P+ L++G D + +
Sbjct: 295 VMVATIAFGMGINKPDVRFVIHYDLPKNLEGYYQESGRAGRDNEPAHCSLFFGYGDVKMI 354
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++I+ + Q + ++ ++++Y E + CRR L FG+ P + C
Sbjct: 355 DYIIEQKPDPQEQRIARQQ---------LRRVINYAESTDCRRTIQLSYFGDSFPGN-C- 403
Query: 318 NSCDAC 323
+CD C
Sbjct: 404 GTCDNC 409
>gi|441498157|ref|ZP_20980358.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441438064|gb|ELR71407.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 728
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 184/310 (59%), Gaps = 18/310 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
S++LLYV PE + LKK + ++ VA+DEAHCIS WGHDFRP YR++ +
Sbjct: 111 SIKLLYVAPESLTKEENIDFLKKAN----VSFVAVDEAHCISEWGHDFRPEYRRIKEIIG 166
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
L ++PI+ALTATA PKVQ D+ ++L ++ V KSSFNR NLFYEVR K A L
Sbjct: 167 LLGNLPIIALTATATPKVQLDIQKNLHMEGADVFKSSFNRTNLFYEVRQKK---HAKKQL 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L+ + IVYCL R E++ L+ G A YHAGL R DD+++
Sbjct: 224 IQFLRDHKGKSGIVYCLSRKKVVEIAELLNVNGFKAAPYHAGLEPAVREKNQDDFLNEDV 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+VVAT+AFGMGID+ DVR V H+++PKS+E +YQE+GR+GRD L K L++Y +D +
Sbjct: 284 DIVVATIAFGMGIDKPDVRFVVHYDVPKSLEGYYQETGRSGRDGLEGKCLMFYSHNDINK 343
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+E K ++ +ER + + + +M Y E CRRK++L FGE+ C
Sbjct: 344 LE--------KFNKDKPVQERENARVL--LQEMSFYAESPVCRRKQLLHYFGEEFTFDNC 393
Query: 317 KNSCDACKHP 326
+ CD C P
Sbjct: 394 E-MCDNCVVP 402
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 143/326 (43%), Positives = 191/326 (58%), Gaps = 16/326 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + ++L G PS +LLYVTPE + A FM L+ + RGLL IDEAHC+S WGHD
Sbjct: 305 SAVIQELRYGTPSFKLLYVTPERIAANYSFMEMLRGLDQRGLLARFVIDEAHCVSQWGHD 364
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L L+ P VPI+ALTATA V+KDV+ +L + N ++LK SF+R NL YEV
Sbjct: 365 FRPDYRGLGCLKQNFPRVPIMALTATATESVRKDVLSALRIPNAVILKRSFDRLNLNYEV 424
Query: 124 RYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLND 181
K L +LK + IVYCL + C + + +L I CA YHAGL
Sbjct: 425 IGK--TKTPQKQLGDLLKERFMNKSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAA 482
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+SV + W S +V+ AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD L
Sbjct: 483 RQRTSVQEKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDDL 542
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRR 300
P+ ++ Y D R+ +L + S+SF +KK M YCE + CRR
Sbjct: 543 PAHCIVLYQKKDFSRIVCMLRNADNFKSESFKVAMEQAKK-------MQTYCELKTECRR 595
Query: 301 KKILESFGEQIPVSLCKNS---CDAC 323
+ +LE FGEQ C++ CD C
Sbjct: 596 QALLEHFGEQYNRQRCRDGPSPCDNC 621
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 194/312 (62%), Gaps = 19/312 (6%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE A+ G +++ LK ++ R LL + IDEAHC+S WGHDFRP Y++L LR+
Sbjct: 616 VKLLYVTPEGLASNGAITRVLKSLYERKLLARIVIDEAHCVSHWGHDFRPDYKQLGLLRD 675
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
+P +ALTATA V+KD++ +L ++N L LKSSFNRPNLFYE++ K D Y +L
Sbjct: 676 RYQGIPFMALTATANEIVKKDIINTLRMENCLELKSSFNRPNLFYEIKPK---KDLYTEL 732
Query: 137 CSVLKANG--DTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWIS 193
+ +NG I+YCL RT+C++++A L G+ YHAGL R + ++W S
Sbjct: 733 YRFI-SNGHLHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVERQRIQNEWQS 791
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+++VAT+AFGMG+D+ DVR V H + PKS+E +YQE+GRAGRD P+ +++Y D
Sbjct: 792 GSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKD 851
Query: 254 RRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQI 311
+ I+S + T+ER + Q++ +CE + CRRK++L FGE
Sbjct: 852 HVTFQKLIMSGDGDA-----ETKERQRQM----LRQVIQFCENKTDCRRKQVLAYFGENF 902
Query: 312 PVSLCKNSCDAC 323
C+ CD C
Sbjct: 903 DKVHCRKGCDIC 914
>gi|427385455|ref|ZP_18881762.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425727099|gb|EKU89960.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 727
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 216/383 (56%), Gaps = 31/383 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVKSDILSGKT--KLLYVAPESLTKEENVEFLKTV----TISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPVIALTATATPKVQHDIQKNLGMVDAEVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 K--TNNVDRDIIKFIKNNQEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLA---KYLGELTSAVLQ-KNHFSQIFISSQDMTDGGQ 361
FGE+ C N CD C +P + L + A+L K +F +I D+ G +
Sbjct: 386 YFGEEYMEENCGN-CDNCLNPKKQVEAQELLCTVIEAILAVKENFKADYII--DIIQGRE 442
Query: 362 YSEF---WNRDDEASGS---EED 378
+E + D EA GS EED
Sbjct: 443 TTEVQAHLHEDLEAFGSGMGEED 465
>gi|172036703|ref|YP_001803204.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|354554517|ref|ZP_08973821.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
gi|171698157|gb|ACB51138.1| ATP-requiring DNA helicase [Cyanothece sp. ATCC 51142]
gi|353553326|gb|EHC22718.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. ATCC 51472]
Length = 711
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 189/312 (60%), Gaps = 14/312 (4%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++LLYV PE F++ L + + L+ AIDEAHC+S+WGHDFRP YR+L L
Sbjct: 108 KGKIKLLYVAPERLLNDNFLNFLDFLRQKVGLSGFAIDEAHCVSAWGHDFRPEYRQLKQL 167
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R P VP+ ALTATA +V+ D++E L LQNP V +SF+RPNL+YEV+ K +Y
Sbjct: 168 RFRYPQVPMFALTATATKRVRADIIEQLGLQNPTVHVASFDRPNLYYEVQEKS--RRSYT 225
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L + +++ + I+YCL R + ++ L GI YHAG+ D R+ +I
Sbjct: 226 QLLNYVRSQ-EGSGIIYCLSRKNVETIAFRLQQDGIEALPYHAGMYDDERAVNQTRFIRD 284
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+++VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD P+ L++ D
Sbjct: 285 DVRIIVATIAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRDGEPANCALFFSFGDL 344
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+R+E+++ + + Q ++ Q+VDY EG+ CRR IL FG+Q
Sbjct: 345 KRLEYLIDQKIDEKEQRVGRQQ---------VRQVVDYAEGTECRRSIILRYFGQQYK-G 394
Query: 315 LCKNSCDACKHP 326
C N CD C +P
Sbjct: 395 KCDN-CDNCNYP 405
>gi|189502511|ref|YP_001958228.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497952|gb|ACE06499.1| hypothetical protein Aasi_1165 [Candidatus Amoebophilus asiaticus
5a2]
Length = 724
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 185/309 (59%), Gaps = 19/309 (6%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY- 77
++LYV PE ++ LK + L+ +A+DEAHCIS WGHDFRP YR + + N
Sbjct: 113 KMLYVAPETLNKEDNLAFLK----QAKLSFIAVDEAHCISDWGHDFRPEYRNIRYVANQQ 168
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
L VPI+ALTATA P+VQ D++ +L + + +SSFNRPNL+YE+RYK+ + A L
Sbjct: 169 LGRVPIIALTATATPRVQLDILNNLDINDATTFQSSFNRPNLYYEIRYKE--EQANKQLI 226
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++K IVYC R DEL+A L+ I A YHAGL+ R + ++ +
Sbjct: 227 KLIKEQPQIMGIVYCQSRKQVDELAALLNLNDIKAAPYHAGLDANVRVKNQEAFLQKQYN 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID DVR V H+++PKS+EA+YQE+GRAGRD LPS L+ Y +D R+
Sbjct: 287 VIVATIAFGMGIDTPDVRFVIHYDMPKSLEAYYQETGRAGRDSLPSTCLMLYNPEDFIRL 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E + N+SK ER K + +M Y CRRK++L FGE C
Sbjct: 347 ERL---NKSK-----PNGEREKSKVL--LEEMKGYITSGVCRRKQLLYYFGESF-ADHC- 394
Query: 318 NSCDACKHP 326
N+CD CK P
Sbjct: 395 NNCDNCKKP 403
>gi|319900082|ref|YP_004159810.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
gi|319415113|gb|ADV42224.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
Length = 727
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 189/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVKSDIVSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDARVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 KTANVDR--DIIKFIKNNSEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 386 YFGEEYTEENCGN-CDNCLNP 405
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 760 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 819
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 820 FRPDYKRMNILRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 879
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 880 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S +L+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1052
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE + CK SCD C
Sbjct: 1053 QLLAYFGENEFNPHFCKKYPDVSCDNC 1079
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 760 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 819
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 820 FRPDYKRMNILRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 879
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 880 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S +L+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1052
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE + CK SCD C
Sbjct: 1053 QLLAYFGENEFNPHFCKKYPDVSCDNC 1079
>gi|357627528|gb|EHJ77194.1| DNA helicase recq5 [Danaus plexippus]
Length = 1133
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 202/349 (57%), Gaps = 15/349 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S KP+ R LYVTPE AT F + ++ + ++ V +DEAHC+S WGHD
Sbjct: 98 RERVLNDLRSMKPNTRFLYVTPEQAATGTFKALMEHLVKYKKVSYVVVDEAHCVSEWGHD 157
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL +LR +P +ALTATA+ +V KD++E+L L NP+ K+ R NL+Y+
Sbjct: 158 FRPDYLKLGNLREKFKSIPWVALTATASAEVTKDILENLKLLNPVAQYKTPSFRRNLYYD 217
Query: 123 VRYKDLLDDAYADLCSVLKAN----------GDTCAIVYCLERTTCDELSAYLSAGGISC 172
V Y++ + D DL LK N + AIVYC R +++++ L+ G++C
Sbjct: 218 VVYQNCIQDEIGDLVEFLKKNLKDEISVKPKDKSAAIVYCRTREQTEDIASMLTKRGLNC 277
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYH GL R SV D W + V ATV+FGMG+D+ VR V H+ +P+++ A+YQE
Sbjct: 278 LAYHGGLKSSERVSVQDRWSNGEVPCVSATVSFGMGVDKASVRAVVHWGLPQNVAAYYQE 337
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD P+ +YY +R ++F+L K++ S++ ++R K + F MV Y
Sbjct: 338 SGRAGRDGKPAFCRIYYCRSERNAVDFLL-KSEIARSKTPEQKQR-CKNAYKSFEVMVKY 395
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVL 341
CE CR K + FGE++P C CD+C + + L + T +
Sbjct: 396 CEEVRCRHKIFADFFGEEVP--QCITRCDSCTDERAVRRALDQHTRRAM 442
>gi|333029342|ref|ZP_08457403.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332739939|gb|EGJ70421.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 727
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 190/321 (59%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ EDL SGK +LLYV PE + LK I ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKEDLVSGKT--KLLYVAPESLTKEDNVDFLKSIK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + + + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEV+
Sbjct: 157 PEYRRIRPIIDEIGKAPLIALTATATPKVQHDIQKNLGIVDAKVFKSSFNRPNLYYEVKA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ +YHAG++ R+
Sbjct: 217 K--TKDVDKDVILFIKNNPNKSGIIYCLSRKKVEELTKILQANGINARSYHAGMDAATRN 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD K
Sbjct: 275 QNQDDFLMERVDVIVATIAFGMGIDKPDVRFVLHYDMPKSLEGYYQETGRAGRDGGEGKC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + Y E S CRRK +L
Sbjct: 335 VTFYSNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLDTAAYAESSLCRRKSLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE V C++ CD C +P
Sbjct: 385 YFGEDYEVENCEH-CDNCLNP 404
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 190/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L P L+LLYVTPE + A+ + L +H R LL + IDEAHC+S WGHDFR
Sbjct: 480 IYSELWGADPGLKLLYVTPEKVAASNKLIQVLNNLHCRNLLARIVIDEAHCVSQWGHDFR 539
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L + +VPI+ALTATA +V+KDV+ L ++ SSFNRPNL YEV
Sbjct: 540 PDYKRLGVFKQNYQNVPIMALTATATQRVRKDVLHQLNIEETKWFVSSFNRPNLVYEVIP 599
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + ++ ++K+ I+YC+ + CD + ++S GI +YHAGL DK R
Sbjct: 600 KKG-KSSLLEIAKLIKSKFARQSGIIYCMTKKECDNTAIFMSGEGIKAVSYHAGLTDKKR 658
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ V W S++ VV AT+AFGMGID+ DVR V H+++P+S+E FYQESGRAGRD +
Sbjct: 659 NDVQMQWTSNKSNVVCATIAFGMGIDKPDVRYVIHYSLPQSIEGFYQESGRAGRDGDVAY 718
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKI 303
L+YY D R++ ++ + ++ T+ K + ++V YCE CRR
Sbjct: 719 CLIYYNYSDMHRIKKLI---EIGGGATYETK----KVRFHNLCRIVSYCENKMDCRRAMQ 771
Query: 304 LESFGEQIPVSLC----KNSCDACK 324
L F EQ + C K +CD C+
Sbjct: 772 LNYFDEQFDKAQCIANEKTTCDNCR 796
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 187/324 (57%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y L + + +L+LLYVTPE ++ + F L +++ G L IDE HC+S WGHDFR
Sbjct: 609 VYRKLYNTESNLKLLYVTPEKISKSTKFCDSLLRLYRDGKLARFVIDEVHCVSQWGHDFR 668
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KLS LR P VPI+ALTATA +V+ D++ L LQ+P SSFNRPNL Y V
Sbjct: 669 PDYKKLSMLRERFPGVPIIALTATATQRVRSDILHQLHLQSPKWFISSFNRPNLRYTVTL 728
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
+ Y + ++K + C I+YC R CD L+ L GI +YHAGL+DK R
Sbjct: 729 RKS-KYPYQLVLDLIKTKFPNDCGIIYCFSRNDCDNLAEALKKEGIQALSYHAGLDDKVR 787
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ W+S + +V+ AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD P+
Sbjct: 788 TDRQIQWVSEKVKVICATIAFGMGIDKPNVRYVIHATMPKSIEGYYQESGRAGRDGEPAD 847
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L Y D R ++ N+ N ++ T + + ++V +CE + CRR
Sbjct: 848 CILLYNYSDMHRYRTMMESNEYANKEALKTH-------LDNLFKIVHFCENMADCRRALQ 900
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L FGE LC + +CD C
Sbjct: 901 LNYFGEMFDRQLCIANMETTCDNC 924
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 760 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 819
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 820 FRPDYKRMNILRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 879
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 880 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSA 939
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 940 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 999
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S +L+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 1000 SHCILFYTYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1052
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE + CK SCD C
Sbjct: 1053 QLLAYFGENEFNPHFCKKYPDVSCDNC 1079
>gi|449548620|gb|EMD39586.1| hypothetical protein CERSUDRAFT_111898 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 197/361 (54%), Gaps = 30/361 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K +I DL SG P +RLLYV+PE TP + + ++G LN + +DEAHCIS WGHD
Sbjct: 146 KQEIMRDLSSGSPEIRLLYVSPEKFCTPELKRLFETLSTQGELNRLVVDEAHCISEWGHD 205
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK--SSFNRPNLFY 121
FR YR+L S R+ P +PI+ALTATA P VQ D++ SL + +LK FNR NLFY
Sbjct: 206 FRAEYRRLGSFRDRYPTIPIMALTATATPIVQDDIVRSLKMAEDHMLKVVHPFNRSNLFY 265
Query: 122 EVRYKDLLDDAYAD---------LCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGIS 171
EV+Y L +Y D + + + G + I+YC R TCDELS +L G++
Sbjct: 266 EVQY---LASSYQDAHMSEIHKYISRLHERRGRPSSGIIYCRTRKTCDELSQFLRGKGLN 322
Query: 172 CAAYHAGLNDKARSSVLDDW-ISSRKQ----VVVATVAFGMGIDRKDVRLVCHFNIPKSM 226
YH G+ L DW I + VV ATVAFGMGID+ DVR + H+++PKS
Sbjct: 323 ARPYHRGIPPATLDRTLADWEIGGSDEGGVDVVCATVAFGMGIDKADVRYIIHYDLPKSF 382
Query: 227 EAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFST--RERSSKKSIS 284
E +YQE+GRAGRD PSK +L+Y +D R+ ++S ++ T S++++
Sbjct: 383 EGYYQETGRAGRDGSPSKCILFYSREDVVRVRKLVSGAHARRVVQVDTFGGPVPSQRAVD 442
Query: 285 DFSQMVDYCEG-SGCRRKKILESFGE-------QIPVSLCKNSCDACKHPNLLAKYLGEL 336
+ +++Y E CR I FGE I C CD CK+P G L
Sbjct: 443 SLTALINYAENVHTCRHVTICRYFGEIIDTEDPDIAARYCHGMCDVCKYPEKTKGRKGRL 502
Query: 337 T 337
T
Sbjct: 503 T 503
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/328 (42%), Positives = 192/328 (58%), Gaps = 20/328 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY +L P+L+LLYVTPE ++A+ F + L ++ RGLL IDEAHC+S WGHDFR
Sbjct: 723 IYRELSKKDPALKLLYVTPEKISASQKFCNLLSSLYERGLLAKFVIDEAHCVSQWGHDFR 782
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++L LR V ++ALTATA P+V+ D++ L L P SSFNRPNL Y +
Sbjct: 783 PDYKRLKMLRENYTKVGMIALTATATPRVRTDILHQLGLTRPKWFMSSFNRPNLRYSIIT 842
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A + + K + C IVYCL R CD+ + + GI YHAGL D
Sbjct: 843 KKGKNCSDEVIAMIKTKYK---NDCGIVYCLSRKECDDYAVQMRKNGIKALGYHAGLTDN 899
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS++ WIS +VV AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 900 NRSNIQGRWISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGEN 959
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +L+Y D R+ ++ + S N + T +I + +MV +CE + CRR
Sbjct: 960 ADCILFYNYADMHRIRKMIEMDNS-NPDAIKT-------NIDNLFKMVSFCENKTDCRRS 1011
Query: 302 KILESFGE----QIPVSLCKNSCDACKH 325
L FGE Q +S SCD C++
Sbjct: 1012 LQLNYFGEIFDRQQCISNKATSCDNCRN 1039
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 206/356 (57%), Gaps = 28/356 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE ++ L +I +NL AIDE+HCIS WGHDFRP YRKLS L+
Sbjct: 104 IKLLYVAPERLTLSSTLTLLDRIK----VNLFAIDESHCISEWGHDFRPEYRKLSILKRK 159
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P +PI+ALTATA PKV+KD + L +++ +SFNR NL Y+VR K + Y +
Sbjct: 160 YPHIPIIALTATATPKVRKDTISQLHIEDCNTYVASFNRKNLLYQVRPKK---ETYEQIV 216
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ D I+YC R T DEL+ L G + YHAGL+D ARS D +I +
Sbjct: 217 EFLRKRKDKSGIIYCQSRKTVDELTGKLRKSGFNALPYHAGLSDAARSRNQDIFIKDDAE 276
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGID+ +VR V H+++P+++E++YQE+GR GRD L + +L++ D+ ++
Sbjct: 277 IIVATIAFGMGIDKPNVRFVIHYDLPRNLESYYQETGRGGRDGLECECILFFSRGDKYKI 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++ + Q + ER + + +++DYC+ + CRRK +L FGE++ C
Sbjct: 337 DYFI-------DQIAKSEEREAAR--LKLKEVMDYCQSTICRRKMLLRYFGEELQEENC- 386
Query: 318 NSCDACKHPNLL------AKYLGELTSAVLQK---NHFSQIFI--SSQDMTDGGQY 362
CD C P + AK L V Q+ H ++I +S+ +T+ G +
Sbjct: 387 GGCDVCLQPVKITDATEEAKLLIRCVKEVSQRYGITHVTEILTGSNSKKITEKGHH 442
>gi|387132182|ref|YP_006298154.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
gi|386375030|gb|AFJ09244.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
Length = 727
Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 184/319 (57%), Gaps = 21/319 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SGK +LLYV PE + K + ++ AIDEAHCIS WGHDFRP YR
Sbjct: 107 DIQSGKT--KLLYVAPESLNKEDSIEFFKTVK----VSFYAIDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + + PI+ALTATA KV+ D+++SL +++ KSSFNRPNL+YEVR K
Sbjct: 161 KIRQAVDQIGKAPIIALTATATDKVRTDIVKSLGIEDCAEFKSSFNRPNLYYEVRPKKNE 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+D + +K N I+YCL R +EL+A L A I YHAGL+ + RS D
Sbjct: 221 EDTNRQIIKFIKQNLGKSGIIYCLSRKKVEELAAVLQANEIKAEPYHAGLDSETRSKTQD 280
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
D++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD K +++Y
Sbjct: 281 DFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGKCIVFY 340
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESF 307
SKN K ++F + +++ I + Y E S CRRK +L F
Sbjct: 341 ------------SKNDLKKLENFMEGKPVAEQDIGRQLLQETETYAESSVCRRKLLLHYF 388
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE+ P C CD C HP
Sbjct: 389 GEEYPKDNC-GMCDNCLHP 406
>gi|195494335|ref|XP_002094796.1| GE20014 [Drosophila yakuba]
gi|194180897|gb|EDW94508.1| GE20014 [Drosophila yakuba]
Length = 1069
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/344 (38%), Positives = 199/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K SL+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVKTSLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ PDV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYPDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGDPKEFKDTPKSQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D + + F+L +N + ++ +E +++++ F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVKSIRFLL-QNDAHRARGRGDKELLTERAVKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PAPDCNGQCDVCKRPKKAEKAL 441
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 181/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 794 IQLLYVTPEMVNKNGALLGALSHLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 853
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L ++N V SFNRPNL YEVR K + +
Sbjct: 854 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 913
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+ + I+YCL R +C++++A L I A YHAGL + R S+ DW S
Sbjct: 914 AETINESYSGQAGIIYCLSRQSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 973
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD S LYYG D
Sbjct: 974 KYNVIVATIAFGMGIDKADVRFVIHHTIPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1033
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + SF ++R + +V +CE S CRR +IL F E+
Sbjct: 1034 GPLRHMIDKGEG----SFEQKKRQRQM----LRHVVQFCENESDCRRVQILAYFNEKFER 1085
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1086 ENCNRSCDNCK 1096
>gi|390945503|ref|YP_006409263.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
gi|390422072|gb|AFL76578.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
Length = 730
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 189/322 (58%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ D+ SGK +LLY PE ++ L KI ++ AIDEAHCIS WGHDF
Sbjct: 104 AQVRADVLSGKT--KLLYFAPESLTKEDNVAFLHKIK----VSFYAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YE+R
Sbjct: 158 RPEYRRIRPIINEIGPAPLIALTATATPKVQLDIQKNLGMSDASVFKSSFNRPNLYYEIR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +D D+ +K N I+YCL R +EL+ L A GI AYHAG++ R
Sbjct: 218 PKHNVD---RDIIRFIKQNEGKSGIIYCLSRKKVEELTELLVANGIKALAYHAGMDAATR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ D ++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AANQDHFLMERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGY 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 335 CLTFYSYKDIQKLE--------KFMQGKPIAEQEIGKLL--LLETVSYAESSMCRRKTLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C++P
Sbjct: 385 HYFGEEYTEENCGN-CDNCRNP 405
>gi|29349252|ref|NP_812755.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|380693604|ref|ZP_09858463.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
gi|383120164|ref|ZP_09940895.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|29341160|gb|AAO78949.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837322|gb|EES65422.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 726
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 216/384 (56%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVDFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 217 K--TNNIDKDIIKFIKNNSEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSMTRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + +V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 LTFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 182/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L ++HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 795 IQLLYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 854
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L ++N V SFNRPNL YEVR K + +
Sbjct: 855 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 914
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+ + I+YCL R +C++++A L I A YHAGL + R S+ DW S
Sbjct: 915 AETINESYSGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 974
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 975 KYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1034
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + SF ++R + +V +CE S CRR +IL F E+
Sbjct: 1035 GPLRHMIDKGEG----SFEQKKRQRQM----LRHVVQFCENESDCRRVQILAYFNEKFEP 1086
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1087 ENCNRSCDNCK 1097
>gi|347835082|emb|CCD49654.1| similar to recQ family helicase RecQ [Botryotinia fuckeliana]
Length = 480
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/378 (39%), Positives = 208/378 (55%), Gaps = 45/378 (11%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL+SG P RLLYVTPE +T F L+ +H + L +A+DEAHCIS WGHD
Sbjct: 107 RQRLLADLESGHPLTRLLYVTPEYCSTDNFRKHLRTVHEQRELARIAVDEAHCISEWGHD 166
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ--NPLVLKSSFNRPNLFY 121
FR S++ LS R PD+PI+ LTATA +V+KDV+ ++CL N V + + NR NL Y
Sbjct: 167 FRKSFKNLSWFRQTFPDIPIICLTATATDQVRKDVIGTMCLSETNLKVFRMTTNRENLHY 226
Query: 122 EVRYKDLLDDAYADLCSVLKAN---------------------GDTCAIVYCLERTTCDE 160
EVR+K D + D LK + I+Y L R C+
Sbjct: 227 EVRFKSDESDHFNDFLHWLKGVHRNRMENPERRAELEQKRERLDNVSGIIYTLFRQDCEN 286
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVC 218
L++ L GI AYHAGL + ++ L+ WI++ K V+VAT AFGMGID+++VR V
Sbjct: 287 LASRLRHSGIGARAYHAGLTHEEKTETLNRWINNDKGYDVIVATTAFGMGIDKENVRFVI 346
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERS 278
H+ IPKS E FYQE+GRAGRD S ++YY +DR R + N S +ER
Sbjct: 347 HWQIPKSFEGFYQEAGRAGRDGKASIHIMYYSREDRDR---------AYNRVSRDAKERV 397
Query: 279 SKKS-ISDFSQMVDYCEGSG-CRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+ ++ I+ +V YCE + CR K I + FGE V C +CD H ++ A +L
Sbjct: 398 NLEARINSLKALVSYCEETDECRHKLICKYFGEN-EVPACDYACDW--HKDVKALKRAKL 454
Query: 337 TSAVLQKNHFSQIFISSQ 354
N ++ F+S+Q
Sbjct: 455 N------NLMTEEFVSTQ 466
>gi|440680362|ref|YP_007155157.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
gi|428677481|gb|AFZ56247.1| ATP-dependent DNA helicase RecQ [Anabaena cylindrica PCC 7122]
Length = 724
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 194/318 (61%), Gaps = 16/318 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + +GK +RLLYV PE + F+ L + + ++ AIDEAHC+S WGHDFRP Y
Sbjct: 103 EAIMNGK--VRLLYVAPERLVSDRFLPLLDVVKEKIGISTFAIDEAHCVSEWGHDFRPEY 160
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R+L LR PDVP +ALTATA +V+ D++E L L+ P + +SFNR NL+YEVR K
Sbjct: 161 RQLKLLRKRYPDVPTIALTATATDRVRADIIEQLGLKQPSIHIASFNRQNLYYEVRAKS- 219
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
AYA++ +++ N + I+YCL R DEL+ L ++ YHAGL+D RS
Sbjct: 220 -KRAYAEILEIVREN-EGSGIIYCLTRKKVDELTFKLQKDKVAALPYHAGLSDDERSKNQ 277
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+I +V+VAT+AFGMGI++ DVR V H ++P+++E +YQESGRAGRD PS+ L+
Sbjct: 278 TRFIRDDVRVMVATIAFGMGINKPDVRFVIHSDLPRNIEGYYQESGRAGRDDEPSRCTLF 337
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ D + +E+ +++ Q + ++ Q++DY EG+ CRR L FG
Sbjct: 338 FSFADVKTIEWSINQKTDPQEQLIAKQQ---------LRQVIDYAEGTDCRRTIQLGYFG 388
Query: 309 EQIPVSLCKNSCDACKHP 326
E+ + C N CD C++P
Sbjct: 389 ERFAGN-CGN-CDNCRYP 404
>gi|345882276|ref|ZP_08833781.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
gi|343918032|gb|EGV28804.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
Length = 725
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 189/326 (57%), Gaps = 25/326 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LT--ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K+ +D+ SG+ +LLYV PE LT T F+ +K ++ A+DEAHCIS WGH
Sbjct: 103 KVMDDIRSGRT--KLLYVAPESLTKEETVAFLQTIK-------ISFYAVDEAHCISEWGH 153
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP YR + + N + + P++ALTATA KV+ D+ +SL + + +SSFNRPNL+YE
Sbjct: 154 DFRPEYRNIRPIINRIGNAPVIALTATATDKVRSDIKKSLGIADAKEFRSSFNRPNLYYE 213
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
VR K +D + ++ N I+YCL R +EL+ L A I A YHAGL
Sbjct: 214 VRPK--TNDIDKQIIKFIRQNAGKSGIIYCLSRKKVEELAEILRANDIKAAPYHAGLESG 271
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 272 VRSQTQDDFLMERLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGE 331
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
+ + +Y D +++E K + E+ + + + Y E S CRR+
Sbjct: 332 GQCIAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRRM 381
Query: 303 ILESFGEQIPVSLCKNSCDACKHPNL 328
+L FGE+ P C N CD C HP +
Sbjct: 382 LLHYFGEEYPYDNCHN-CDNCLHPKV 406
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 182/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L ++HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 795 IQLLYVTPEMVNKNGALLGALSRLHSRKKLARIVIDEAHCVSQWGHDFRPDYKELGNTRA 854
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L ++N V SFNRPNL YEVR K + +
Sbjct: 855 KFPGIPLMALTATATENVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPKNTNVIESI 914
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+ + I+YCL R +C++++A L I A YHAGL + R S+ DW S
Sbjct: 915 AETINESYSGQAGIIYCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSG 974
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 975 KYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDT 1034
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + SF ++R + +V +CE S CRR +IL F E+
Sbjct: 1035 GPLRHMIDKGEG----SFEQKKRQRQM----LRHVVQFCENESDCRRVQILAYFNEKFEP 1086
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1087 ENCNRSCDNCK 1097
>gi|189463687|ref|ZP_03012472.1| hypothetical protein BACINT_00018 [Bacteroides intestinalis DSM
17393]
gi|189438637|gb|EDV07622.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 727
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 216/383 (56%), Gaps = 31/383 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVKSDILSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPVIALTATATPKVQHDIQKNLGMVDAEVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 K--TNNIDRDIIKFIKNNSEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLA---KYLGELTSAVLQ-KNHFSQIFISSQDMTDGGQ 361
FGE+ C N CD C +P + L + A+L K +F +I D+ G +
Sbjct: 386 YFGEEYLEENCGN-CDNCLNPKKQVEAQELLCTVIEAILAVKENFKADYII--DIIQGRE 442
Query: 362 YSEF---WNRDDEASGS---EED 378
+E + D EA GS EED
Sbjct: 443 TTEVQAHLHEDLEAFGSGMGEED 465
>gi|255535742|ref|YP_003096113.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
gi|255341938|gb|ACU08051.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium
3519-10]
Length = 732
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 140/341 (41%), Positives = 198/341 (58%), Gaps = 22/341 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+K ++++D+ +G+ +LLYV PE ++ LK++ ++ VAIDEAHCIS WG
Sbjct: 101 QIK-QVFDDIRAGRT--KLLYVAPESLIKEDYLEFLKEVK----ISFVAIDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR L + + + DVP++ALTATA PKVQ D+ ++L + N LV K SFNRPNL+Y
Sbjct: 154 HDFRPEYRNLKLIIDKIADVPVIALTATATPKVQDDIQKTLGMSNALVFKESFNRPNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K +D ++ + A IVYCL R +E + L GI+ YHAGL+
Sbjct: 214 EVRPKVNID---REIVKFINARKGKSGIVYCLSRRKVEEFAQLLQVNGINALPYHAGLDQ 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD
Sbjct: 271 KTRVMNQDKFLMEEADVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L +Y D ++E L++ + S RE + +++ Y E S RR+
Sbjct: 331 EGYCLAFYDPKDIEKLEKFLAQ------KPVSEREI----GLQLLNEVQGYAETSMSRRQ 380
Query: 302 KILESFGEQI-PVS-LCKNSCDACKHPNLLAKYLGELTSAV 340
IL FGEQ PV+ CD +P L EL +
Sbjct: 381 YILYYFGEQFDPVNGAGARMCDNFTNPPTLKDATKELKQVL 421
>gi|195378226|ref|XP_002047885.1| GJ11681 [Drosophila virilis]
gi|194155043|gb|EDW70227.1| GJ11681 [Drosophila virilis]
Length = 1026
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/373 (36%), Positives = 214/373 (57%), Gaps = 18/373 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K ++ LY+TPE AT F L ++ L A+DEAHC+S WGHD
Sbjct: 101 RERVIMDLRAVKTKIKFLYITPEQAATKFFQELLHSLYKHKKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ PDV LALTATA+ +V++D+ + L L+ P+ S+ + R NL+Y+
Sbjct: 161 FRPDYLKLGELRSKYPDVVWLALTATASLEVREDIHKQLRLRQPVAHFSTPSFRSNLYYD 220
Query: 123 VRYKDLLDD------AYADLC----SVLKANGDT---CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D A+A C + KA C I+YC R + ++ +S G
Sbjct: 221 IVYKNSIEDDFQHLAAFAQHCLGDEAKFKAEPKPKRGCGIIYCRTRDQVERVAVGVSKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
+ AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 VGAVAYHAGLKTAERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N ++ ++ RE +++++ F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAQRARGRGDRELLTERALRQFERI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
VD+CE + CR K + FG+ P C CD CK P K L + + S +
Sbjct: 400 VDFCEQTRCRHKLFADYFGD--PTPDCSAQCDVCKRPKQAEKALETFQQLCMDASFKSHV 457
Query: 350 FISS-QDMTDGGQ 361
++ D+ +GG+
Sbjct: 458 SLADCADLYEGGR 470
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 214/361 (59%), Gaps = 25/361 (6%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE+ +A+ + K+++ G L V +DEAHC+S+WGHDFRP Y++L +
Sbjct: 648 LDVVYISPEMISASQQCKRAIDKLYTDGNLARVVVDEAHCVSNWGHDFRPDYKELKMFKV 707
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA+ +V D++ +L L+N + LK SFNR NL+YEV+ KD D ++
Sbjct: 708 EYPTIPMMALTATASKQVIMDIIHNLGLKNEVFLKQSFNRTNLYYEVKKKD--KDTMNNI 765
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C ++K + I+YC + +C+++S+ L I CA YHAG+ + RS+V W
Sbjct: 766 CDMIKNRFRNQTGIIYCHSKNSCEQVSSQLQRKNIRCAYYHAGMEPEERSAVQKAWQEDE 825
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V H+ +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 826 IQVICATVAFGMGIDKPDVRFVIHYTVPRTLEGYYQETGRAGRDGNYSYCVTYFHFKDIR 885
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+Q+ + + + +K ++ +++ YC+ + CRRK +L F E +
Sbjct: 886 TMQTMIQKDQNLDRE-------NKQKHLNKLQEVMAYCDNITDCRRKLVLSYFNEDFNPA 938
Query: 315 LCKNSCDACKH-PNL---------LAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQYSE 364
LC +CD CK+ N+ LAK + L A+ H I QD+ G + S+
Sbjct: 939 LCAKNCDNCKNRSNITLEKRDVTGLAKDIARLVEAI---QHDRVTLIHCQDIFKGSRNSK 995
Query: 365 F 365
Sbjct: 996 I 996
>gi|365875470|ref|ZP_09414998.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442588734|ref|ZP_21007544.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
gi|365756729|gb|EHM98640.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis Ag1]
gi|442561492|gb|ELR78717.1| ATP-dependent DNA helicase RecQ [Elizabethkingia anophelis R26]
Length = 735
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 203/351 (57%), Gaps = 22/351 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q KT + +D+ +G+ +LLYV PE ++ K++ ++ AIDEAHCIS WG
Sbjct: 101 QTKT-VMDDIRNGRT--KLLYVAPESLIKEEYIDFFKEVP----ISFFAIDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR L S+ + + DVP++ALTATA PKVQ D+ ++L + N LV K SFNRPNLFY
Sbjct: 154 HDFRPEYRNLKSIIDKIADVPVIALTATATPKVQDDIQKTLGMTNALVYKESFNRPNLFY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K +D ++ +KA IVYCL R +E + L G++ YHAGL+
Sbjct: 214 EVRPKVNID---KEIVKFIKAQNGKSGIVYCLSRRKVEEFAQLLQVNGLNALPYHAGLDA 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R + D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD
Sbjct: 271 KTRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+ +Y D ++E L++ + S RE + +++V Y E S RR+
Sbjct: 331 EGHCIAFYDPKDIEKLEKFLAQ------KPVSEREI----GLQLLNEVVGYVETSMSRRQ 380
Query: 302 KILESFGEQI-PVS-LCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIF 350
+L FGE+ P++ CD +P +L +LT + N Q F
Sbjct: 381 YLLYYFGEKFDPINGAGAKMCDNSVNPPVLKDASKDLTKILSLVNDLGQKF 431
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 139/381 (36%), Positives = 207/381 (54%), Gaps = 28/381 (7%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ K +I D P + LLYVTPE+ + F + ++ ++ RG + IDEAHC+S
Sbjct: 918 EYKRQIMSTFDEPSPEHFIELLYVTPEMVSMNSAFNNAMQTLYQRGKFARLVIDEAHCVS 977
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + +R P VP +ALTATA V D+ +L + N V SFNRPN
Sbjct: 978 QWGHDFRPDYKTIGQVRMRFPRVPFMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPN 1037
Query: 119 LFYEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
L+YEVR K +A + S++ A +T IVY L R +E++ L+ GI+ YHA
Sbjct: 1038 LYYEVRTKKSHANATESIASLINAKYHNTTGIVYTLSRKQAEEVAQTLAGYGIAARHYHA 1097
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
++ +A+ V W +VVVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAG
Sbjct: 1098 AIDPQAKVDVQRSWQKGDIKVVVATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAG 1157
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-S 296
RD PS +L+YG D R ++ +++ N+Q ++ + +++ +C+ S
Sbjct: 1158 RDGKPSDCILFYGKADIRVLKKMIADGDGNNAQ--------KERQMVMLNRVTAFCDNKS 1209
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKY-LGELTSAVLQKNHFSQIFISSQ- 354
CRR ++L FGE S C+ SCD C+ + + E A +Q H + +SQ
Sbjct: 1210 DCRRTEVLRYFGEDFVPSQCQKSCDNCRAGLVFEQQDFSEYAIAAIQVVHTQRRLTASQC 1269
Query: 355 -------------DMTDGGQY 362
++ GGQY
Sbjct: 1270 ADILLGKKSPAHEELVSGGQY 1290
>gi|224535963|ref|ZP_03676502.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226021|ref|ZP_17212487.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522418|gb|EEF91523.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630878|gb|EIY24859.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 727
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/383 (39%), Positives = 216/383 (56%), Gaps = 31/383 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVKSDILSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPVIALTATATPKVQHDIQKNLGMIDAEVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 K--TNNIDRDIIKFIKNNSEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLA---KYLGELTSAVLQ-KNHFSQIFISSQDMTDGGQ 361
FGE+ C N CD C +P + L + A+L K +F +I D+ G +
Sbjct: 386 YFGEEYMEENCGN-CDNCLNPKKQVEAQELLCTVIEAILAVKENFKADYII--DIIQGRE 442
Query: 362 YSEF---WNRDDEASGS---EED 378
+E + D EA GS EED
Sbjct: 443 TTEVQAHLHEDLEAFGSGMGEED 465
>gi|359474777|ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 202/361 (55%), Gaps = 32/361 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G L++LYVTPE ++ + F+SKL+K H G L+L++IDEAHC S WGHDFR
Sbjct: 171 IYKALEKGDGDLKILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFR 230
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ PDVP++ALTATA KVQ D+ME L + + S+ NRPNLFY VR
Sbjct: 231 PDYKNLGILKTQFPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVRE 290
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 291 KSSVGRVVIDEIAEYIQESYPNNES-GIVYCFSRKECEQVAKELRERGISADYYHADMDV 349
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W +S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 350 NARERVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 409
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
PS+ LLY+ D R S E S +++ D +V YC+ CRR
Sbjct: 410 PSECLLYFRPGDVPR------------QSSMVFYENSGLQNLYD---IVQYCQSKRECRR 454
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGG 360
F E P+ C CD C + + E+ + L K S + QDM D
Sbjct: 455 NAFFRHFAE--PLQDCNGMCDNCA----FSTEVKEVDVSCLAKAMISLL----QDMQDND 504
Query: 361 Q 361
Q
Sbjct: 505 Q 505
>gi|307107282|gb|EFN55525.1| hypothetical protein CHLNCDRAFT_133956 [Chlorella variabilis]
Length = 817
Score = 254 bits (649), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 191/327 (58%), Gaps = 25/327 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +L +P+++LLYVTPE L L+ +HS GLL + +DEAHC+S+WGHDFR
Sbjct: 372 VFLELGKARPTIKLLYVTPEQLVRGERLKGALRALHSHGLLARLVVDEAHCVSAWGHDFR 431
Query: 66 PSYRKLSSLRNY-LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P Y++L ++++ L VP++ALTATA PKV++D+M +L + P + SF RPNL +
Sbjct: 432 PDYKQLGAVKSSCLRGVPMMALTATATPKVRQDIMSTLHMAAPRQFQVSFFRPNLCFRKD 491
Query: 125 YK----DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
Y L+ ++ ++ + + IVYCL R + + AA HAG+
Sbjct: 492 YTRSEDSGLEGYMEEMMVYIQNHREGSGIVYCLSRDNTE-----------TSAAVHAGMT 540
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
K R V +DW + R QVVVAT+AFGMG+D+ DVR V HF + KSME +YQE+GRAGRD
Sbjct: 541 PKQRMQVQNDWRTGRVQVVVATIAFGMGVDKADVRYVIHFTLSKSMEGYYQEAGRAGRDG 600
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCR 299
P++ LLYY D R+ +L K + QSF ++ + QM YCE G CR
Sbjct: 601 GPAECLLYYAKRDVPRIVQLLHKGAKRAKQSF-------QRELDLLKQMQAYCEDGERCR 653
Query: 300 RKKILESFGEQIPVSLCKNSCDACKHP 326
++LE FGE+ C +CD C P
Sbjct: 654 HAQVLEYFGERWQQGSCGAACDVCCGP 680
>gi|434399695|ref|YP_007133699.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
gi|428270792|gb|AFZ36733.1| ATP-dependent DNA helicase RecQ [Stanieria cyanosphaera PCC 7437]
Length = 708
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 189/310 (60%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F + L KI + ++ +AIDEAHCIS WGHDFRP YR+L R
Sbjct: 107 IKLLYVAPERLLAEKFRTFLDKIANNIGISTIAIDEAHCISEWGHDFRPEYRQLKQFRQR 166
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP+LALTATA +VQ+D++E L LQNP V +SFNR N+ Y+V+ K +Y L
Sbjct: 167 YPQVPLLALTATATKRVQQDIIEQLGLQNPSVHLNSFNRFNIHYQVQPKQ--QRSYHQLL 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ IVYCL R +E++ L GI YHAG+ D+ R+ ++ Q
Sbjct: 225 QEIRSQSG-AGIVYCLSRRNVEEVAYKLQKDGIKALPYHAGMTDEKRTINQTRFLRDDVQ 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGI++ DVR V H+++P+S+E FYQESGRAGRD + S+L++ M D +++
Sbjct: 284 VMVATIAFGMGINKPDVRFVFHYDLPRSLENFYQESGRAGRDGESATSILFFSMGDWKKI 343
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++ + Q + ++ +Q++DY EG CRR +L FGE+ + C
Sbjct: 344 DYLIEQKPDPQEQRIARQQ---------LNQVIDYAEGVDCRRTILLRYFGERFSGN-C- 392
Query: 318 NSCDACKHPN 327
CD C +P+
Sbjct: 393 GQCDNCLNPH 402
>gi|393241346|gb|EJD48868.1| ATP-dependent DNA helicase [Auricularia delicata TFB-10046 SS5]
Length = 852
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 190/352 (53%), Gaps = 27/352 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
++ +I DL SG P RLLY+TPE + P F LK ++ + LN +DEAHCIS WG
Sbjct: 138 HMRQEIIRDLQSGHPRTRLLYITPESMSRPQFRGVLKVVYQQNELNRFVVDEAHCISEWG 197
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNP--LVLKSSFNRPNL 119
HDFR YRKL + R PDVPI+ALTA+A P V++D++ SL ++N L + FNR NL
Sbjct: 198 HDFREEYRKLGNFRQMFPDVPIMALTASATPYVREDIIRSLGMENDQLLTVVHPFNRHNL 257
Query: 120 FYEVRYKDLLDDAYADLCSVL--------KANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
FYE+RY D A + V K + ++YC +R TC+EL+A+L GI+
Sbjct: 258 FYEIRYMPSTWDQEAQMKHVQEYIQKLHDKRGCPSSGLIYCRKRDTCNELAAFLRKKGIN 317
Query: 172 CAAYHAGLNDKARSSVLDDWISSRK-------QVVVATVAFGMGIDRKDVRLVCHFNIPK 224
YH GL L W + V V TVAFGMGID+ DVR V HF++PK
Sbjct: 318 AKPYHKGLGAATLDLTLRQWEETTDGQGAGAVDVAVCTVAFGMGIDKPDVRYVIHFDLPK 377
Query: 225 SMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFIL--SKNQSKNSQSFSTRERSSKKS 282
S E +YQE+GRAGRD +K +LYY D + + ++N+ S S ++S
Sbjct: 378 SFEGYYQETGRAGRDGNSAKCILYYSRKDALSIRALQQRARNERVAKVSLEAAPESGERS 437
Query: 283 ISDFSQMVDYCEGSG-CRRKKILESFGEQ-------IPVSLCKNSCDACKHP 326
+ ++ Y E + CR I FGE+ I + C CD CK+P
Sbjct: 438 AESLAALLHYAEDTSVCRHVSICRFFGEEVNDKDEKIKSTYCNKMCDVCKYP 489
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 785 IQLLYVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 844
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L +++ V SFNRPNL YEVR K + +
Sbjct: 845 RFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGI 904
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWIS 193
+K NG I+YCL R +C+ ++ L I+ A YHAGL + R S+ DW S
Sbjct: 905 AETIKTSYNGQ-AGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQS 963
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 964 GKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQD 1023
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
+ ++ K + N Q R+ +V +CE S CRR +IL F E+
Sbjct: 1024 TATIRNMIDKGEGSNEQKSRQRQM--------LRHVVQFCENRSDCRRVQILAYFNEKFK 1075
Query: 313 VSLCKNSCDACK 324
C SCD CK
Sbjct: 1076 KENCNRSCDNCK 1087
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|240275770|gb|EER39283.1| RecQ family helicase MusN [Ajellomyces capsulatus H143]
Length = 1559
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 785 IQLLYVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 844
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L +++ V SFNRPNL YEVR K + +
Sbjct: 845 RFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGI 904
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWIS 193
+K NG I+YCL R +C+ ++ L I+ A YHAGL + R S+ DW S
Sbjct: 905 AETIKTSYNGQ-AGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQS 963
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 964 GKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQD 1023
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
+ ++ K + N Q R+ +V +CE S CRR +IL F E+
Sbjct: 1024 TATIRNMIDKGEGSNEQKSRQRQM--------LRHVVQFCENRSDCRRVQILAYFNEKFK 1075
Query: 313 VSLCKNSCDACK 324
C SCD CK
Sbjct: 1076 KENCNRSCDNCK 1087
>gi|325093139|gb|EGC46449.1| RecQ family helicase MusN [Ajellomyces capsulatus H88]
Length = 1559
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 785 IQLLYVTPEMVNKNGALLDILSHLHSRHKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 844
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L +++ V SFNRPNL YEVR K + +
Sbjct: 845 RFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGI 904
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWIS 193
+K NG I+YCL R +C+ ++ L I+ A YHAGL + R S+ DW S
Sbjct: 905 AETIKTSYNGQ-AGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQS 963
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 964 GKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQD 1023
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
+ ++ K + N Q R+ +V +CE S CRR +IL F E+
Sbjct: 1024 TATIRNMIDKGEGSNEQKSRQRQM--------LRHVVQFCENRSDCRRVQILAYFNEKFK 1075
Query: 313 VSLCKNSCDACK 324
C SCD CK
Sbjct: 1076 KENCNRSCDNCK 1087
>gi|296085510|emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 202/361 (55%), Gaps = 32/361 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G L++LYVTPE ++ + F+SKL+K H G L+L++IDEAHC S WGHDFR
Sbjct: 171 IYKALEKGDGDLKILYVTPEKISKSKRFVSKLEKCHHSGCLSLISIDEAHCCSQWGHDFR 230
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ PDVP++ALTATA KVQ D+ME L + + S+ NRPNLFY VR
Sbjct: 231 PDYKNLGILKTQFPDVPVVALTATATKKVQNDLMEMLHIPKCIKFVSTVNRPNLFYMVRE 290
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 291 KSSVGRVVIDEIAEYIQESYPNNES-GIVYCFSRKECEQVAKELRERGISADYYHADMDV 349
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W +S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 350 NARERVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 409
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
PS+ LLY+ D R S E S +++ D +V YC+ CRR
Sbjct: 410 PSECLLYFRPGDVPR------------QSSMVFYENSGLQNLYD---IVQYCQSKRECRR 454
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGG 360
F E P+ C CD C + + E+ + L K S + QDM D
Sbjct: 455 NAFFRHFAE--PLQDCNGMCDNCA----FSTEVKEVDVSCLAKAMISLL----QDMQDND 504
Query: 361 Q 361
Q
Sbjct: 505 Q 505
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|225563190|gb|EEH11469.1| RecQ family helicase MusN [Ajellomyces capsulatus G186AR]
Length = 1559
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 181/312 (58%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 785 IQLLYVTPEMVNKNGALLDILSHLHSRRKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 844
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L +++ V SFNRPNL YEVR K + +
Sbjct: 845 RFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKGTNVVDGI 904
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWIS 193
+K NG I+YCL R +C+ ++ L I+ A YHAGL + R S+ DW S
Sbjct: 905 AETIKTSYNGQ-AGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISIQTDWQS 963
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 964 GKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQD 1023
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
+ ++ K + N Q R+ +V +CE S CRR +IL F E+
Sbjct: 1024 TATIRNMIDKGEGSNEQKSRQRQM--------LRHVVQFCENRSDCRRVQILAYFNEKFK 1075
Query: 313 VSLCKNSCDACK 324
C SCD CK
Sbjct: 1076 KENCNRSCDNCK 1087
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo abelii]
Length = 1398
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 728 TNIYLQLSKKDPIIKLLYVTPEKICASNRLVSTLENLYERKLLARFVIDEAHCVSQWGHD 787
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 788 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 847
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 848 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 907
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 908 RDEVQQKWINQDDCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEM 967
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 968 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1020
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1021 QLLAYFGENGFNPDFCKKHPDVSCDNC 1047
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 194/326 (59%), Gaps = 16/326 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY+DL S P L+LLYVTPE ++++ F + L +H R L + IDEAHC+S+WGHDF
Sbjct: 684 RIYDDLYSSCPVLKLLYVTPEKISSSAKFQNLLSALHRRRQLGRIVIDEAHCVSAWGHDF 743
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ-NPLVLKSSFNRPNLFYEV 123
RP Y++L LR PDVPI+ALTATA +V+ DV+ L LQ + SSFNRPNL Y V
Sbjct: 744 RPDYKRLYMLREQFPDVPIIALTATANTRVRMDVITQLKLQPDTRWFLSSFNRPNLKYLV 803
Query: 124 RYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K ++ +++KA IVYCL + CD+L+ GI +YHAGL D
Sbjct: 804 LPKKGAS-TKGEMINLIKAKFARDTGIVYCLSKKECDQLATDFRKAGIKAKSYHAGLTDT 862
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R + +WI R +VV AT+AFGMGID+ DVR V H+ +PKS+E +YQESGRAGRD
Sbjct: 863 IREATQKEWIGDRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEI 922
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +LYY D +R ++ + S SF ++ +++ +MV+YCE + CRR
Sbjct: 923 ATCILYYNYSDMQRYRKMMDND---TSISFEAKQ----IHMNNLLRMVNYCENVTDCRRT 975
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ LE F E C +CD C
Sbjct: 976 QQLEYFAEYFTSEQCLSNRDTACDNC 1001
>gi|167518966|ref|XP_001743823.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777785|gb|EDQ91401.1| predicted protein [Monosiga brevicollis MX1]
Length = 453
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 188/328 (57%), Gaps = 20/328 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
LRLLY+TPE T ++ ++ +L L+A+DEAHC+S WGHDFRP++R+L+ LR
Sbjct: 118 LRLLYLTPETLQTDEMQQLIQALYDDSVLRLMAVDEAHCVSEWGHDFRPAFRRLAVLRRL 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P P++ALTATA +VQ D++ +L L+NP V++ S R NL EVR KD+ + D+
Sbjct: 178 CPTTPVMALTATAQAQVQSDIITTLKLRNPAVVRRSTYRDNLTLEVRMKDMYPNLMGDIT 237
Query: 138 SVLKANGDTC--------AIVYCLERTTCDELSA----YLSAGGISCAAYHAGLNDKARS 185
+ ++A + I+Y R C+ ++ +L+ GI CAAYHAGLN + R+
Sbjct: 238 TFIEAQHEAATARGQAASGIIYAFRREDCEAVAGAVQRHLTRAGIRCAAYHAGLNAEERN 297
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ +W VV AT+AFGMGID+ +VR V H + KS+EA+YQE+GRAGRD P+
Sbjct: 298 RIQHEWTVGHIHVVAATIAFGMGIDKANVRYVVHATMSKSLEAYYQEAGRAGRDGQPAVC 357
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LYY D +++ Q K ++S +E+ + M YC + CR I
Sbjct: 358 RLYYAQSDMSLFQYL----QQKEAKSRQNKEQPDRG--DHLRHMQHYCLAATCRHAVIAR 411
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYL 333
FGE + S C+ CD C+ P + K L
Sbjct: 412 HFGEAL--SPCQTRCDCCREPESVQKQL 437
>gi|329962624|ref|ZP_08300572.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328529655|gb|EGF56553.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 727
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 188/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVKSDILSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVEAQVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 KTANVDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKALLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 386 YFGEEYTEENCGN-CDNCLNP 405
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 754 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 813
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 814 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYV 873
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 874 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 933
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 934 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 993
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T I++ MV YCE + CRR
Sbjct: 994 SHCLLFYTYHDVTRLKRLILMEKEGNHHTRETH-------INNLYSMVHYCENITECRRI 1046
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE+ CK SCD C
Sbjct: 1047 QLLAYFGEKGFNPDFCKKYPDVSCDNC 1073
>gi|270295711|ref|ZP_06201911.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270273115|gb|EFA18977.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 727
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 189/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVRSDILSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 KTANVDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKALLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 386 YFGEEYMEENCGN-CDNCLNP 405
>gi|298480171|ref|ZP_06998369.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273452|gb|EFI15015.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 726
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ AR+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLART 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|262408128|ref|ZP_06084675.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|294645124|ref|ZP_06722849.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294809724|ref|ZP_06768411.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|336403758|ref|ZP_08584467.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|345508918|ref|ZP_08788536.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|229447212|gb|EEO53003.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|262353680|gb|EEZ02773.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|292639548|gb|EFF57841.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294443058|gb|EFG11838.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|335945112|gb|EGN06928.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
Length = 726
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ AR+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLART 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|160890574|ref|ZP_02071577.1| hypothetical protein BACUNI_03017 [Bacteroides uniformis ATCC 8492]
gi|317479884|ref|ZP_07939001.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|423304003|ref|ZP_17282002.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423307273|ref|ZP_17285263.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|156859573|gb|EDO53004.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
gi|316903958|gb|EFV25795.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|392685931|gb|EIY79239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392690525|gb|EIY83788.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 727
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 189/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 104 QVRSDILSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 218 KTANVDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 336 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKALLH 385
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 386 YFGEEYIEENCGN-CDNCLNP 405
>gi|423211952|ref|ZP_17198481.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295088062|emb|CBK69585.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens XB1A]
gi|392695316|gb|EIY88539.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 726
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ AR+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLART 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|399927001|ref|ZP_10784359.1| ATP-dependent DNA helicase RecQ1 [Myroides injenensis M09-0166]
Length = 731
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 20/307 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ ED+ SG +LLYV PE ++S LK++ L+ VAIDEAHCIS WGHDF
Sbjct: 103 NQVKEDIKSG--VTKLLYVAPESLTKEEYVSFLKEVK----LSFVAIDEAHCISEWGHDF 156
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR L ++ L D+P++ LTATA PKVQ+D++++L + + V K+SFNRPNLFYE+R
Sbjct: 157 RPEYRNLRNIIRQLGDIPMIGLTATATPKVQEDILKNLEIPDANVFKASFNRPNLFYEIR 216
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + +D+ +K N ++YCL R +E++ L GIS YHAGL+ K R
Sbjct: 217 PK--TKNIESDIIRFIKQNAGKSGVIYCLSRKKVEEIANVLQVNGISAVPYHAGLDAKTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 275 AKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAGRDGGEGH 334
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L YY D ++E F+ K ++ F+ ++V Y E S RRK +
Sbjct: 335 CLAYYSYKDIEKLEKFMAGKPIAEQEIGFAL-----------LQEVVGYAETSMSRRKFL 383
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 384 LHYFGEE 390
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/326 (43%), Positives = 190/326 (58%), Gaps = 16/326 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATP-GFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + ++L GKP+ +LLYVTPE T FM L+ + RGLL IDEAHC+S WGHD
Sbjct: 299 SAVIQELRCGKPAFKLLYVTPERIVTNYSFMETLRGLDQRGLLARFVIDEAHCVSQWGHD 358
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L L+ P VPI+ALTATA V+KDV+ +L + N +VLK SF+R NL YEV
Sbjct: 359 FRPDYRGLGCLKQNFPRVPIMALTATATESVRKDVLGALRIPNAVVLKRSFDRLNLNYEV 418
Query: 124 RYK-DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLND 181
K DL N IVYCL + C + + +L I CA YHA L
Sbjct: 419 IGKTKTFQKQLGDLLKERFMN--ESGIVYCLSKNECADTAKFLREKYKIKCAHYHASLAA 476
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+SV + W S +V+ AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD+L
Sbjct: 477 RQRTSVQEKWHSGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDEL 536
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRR 300
P+ ++ Y D R+ +L ++ S+SF +KK M YCE + CRR
Sbjct: 537 PAHCIVLYQKKDFSRIVCMLRNGENFRSESFRVAMEQAKK-------MQAYCELKTECRR 589
Query: 301 KKILESFGEQIPVSLCKNS---CDAC 323
+ +L+ FGEQ C++ CD C
Sbjct: 590 QALLQHFGEQYDRRRCRDGPSPCDNC 615
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 195/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE+ +A+ +K++HS G L V +DEAHC+S+WGHDFRP Y++L +
Sbjct: 763 LDVVYISPEMISASEQCKRAIKRLHSDGKLARVVVDEAHCVSNWGHDFRPDYKELKYFKR 822
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PDVP++ALTATA+ +V+ D++ +L L++P+ LK SFNR NL+YEVR K+ + ++
Sbjct: 823 EYPDVPMMALTATASEQVRMDIIHNLELKDPVFLKQSFNRTNLYYEVRKKN--KNTIFEI 880
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
++K+ + I+YC + +C++ S + GI A YHAG+ R + W +
Sbjct: 881 ADMIKSKFRNQTGIIYCHSKNSCEQTSNQMQRAGIKSAYYHAGMEPDDRLKIQKAWQADE 940
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 941 IQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAGRDGKYSYCITYFCFRDVR 1000
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1001 TMQTMIQKDENLDRE-------NKEKHLNKLQQVMAYCDNATDCRRKLVLSYFNEDFDSK 1053
Query: 315 LCKNSCDACKH 325
LC +CD CK+
Sbjct: 1054 LCHKNCDNCKN 1064
>gi|451846770|gb|EMD60079.1| hypothetical protein COCSADRAFT_100311 [Cochliobolus sativus
ND90Pr]
Length = 485
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 196/357 (54%), Gaps = 30/357 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I DL G P RLLYVTPE F L+ IHS+ L +A+DEAHC+S WGHD
Sbjct: 103 RKRILADLQCGHPLTRLLYVTPEFCQGDHFRKILRVIHSQRELARIAVDEAHCVSEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFY 121
FRPS+++LS + PD+P++ LTATA +V+ D++ +L L + + S +RPNL Y
Sbjct: 163 FRPSFQQLSFFKTEFPDIPVICLTATATARVRDDIINTLALDPKKLATFRMSSSRPNLHY 222
Query: 122 EVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCDE 160
EVR+K +D Y D S+LK + I+Y L R C+
Sbjct: 223 EVRFKSDEEDHYDDFLSLLKGIYARRAERPERVTQLASQNQRTDNVPGIIYTLFRKDCES 282
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVC 218
L+ L + GI YHAGL+ R+ L WI+++ ++VAT AFGMGID+++VR V
Sbjct: 283 LAERLRSDGIGAKPYHAGLSVSERADALSSWIANKPGYDIIVATTAFGMGIDKENVRFVV 342
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN---QSKNSQSFSTR 275
H+ IPKS E FYQE+GRAGRD S +LYYG +DR R +++++ Q S +
Sbjct: 343 HWQIPKSFEGFYQEAGRAGRDGKASLCILYYGREDRDRAANMMARDTARQPSKSGGPDAQ 402
Query: 276 ERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
++ +V YCE + CR K I + F ++ P C +CD CK L +
Sbjct: 403 QQQLMNRARSLQALVGYCEATDKCRHKIIAKYFADEAPAP-CDFACDWCKDAEALVR 458
>gi|332707801|ref|ZP_08427828.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
gi|332353504|gb|EGJ33017.1| ATP-dependent DNA helicase RecQ [Moorea producens 3L]
Length = 709
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 197/318 (61%), Gaps = 14/318 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV+PE F+ L ++ S+ + AIDEAHC+S WGHDFRP YR+L LRN
Sbjct: 110 IKLLYVSPERLLAEQFIPFLDRVRSQIGIPTFAIDEAHCVSQWGHDFRPDYRQLKLLRNR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+ +LALTATA +VQ+D+++ L L+ P V +SFNRPNL+Y+V+ K +Y L
Sbjct: 170 YPNSSVLALTATATNRVQQDIIQQLELRQPKVHIASFNRPNLYYDVQPKQ--RQSYQQLL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++++ + IVYC R + +E++ L GIS YH G+ DKAR++ + +I +
Sbjct: 228 KQIRSHQGS-GIVYCTSRRSVEEVAFRLQNDGISALPYHGGMTDKARATNQNRFIRDDVR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGI++ DVR V H+++P+++E++YQESGRAGRD P+ + Y D ++
Sbjct: 287 VIVATVAFGMGINKPDVRFVIHYDLPRNIESYYQESGRAGRDGEPATCTVLYSASDISKL 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+++ + Q + ++ +Q+VDY EG+ CRR+ +L FGE+ P + K
Sbjct: 347 HYLIDQKPDPKEQRIAYQQ---------LNQIVDYAEGTDCRRRILLGYFGERFPGNCEK 397
Query: 318 NSCDACKHPNLLAKYLGE 335
CD C +P L + E
Sbjct: 398 --CDNCCYPKPLEDWTIE 413
>gi|406603614|emb|CCH44869.1| bloom syndrome protein [Wickerhamomyces ciferrii]
Length = 1521
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 192/309 (62%), Gaps = 10/309 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + + +++ +G L V +DEAHC+SSWGHDFRP Y+ LS +
Sbjct: 799 LDLVYLSPEMISASNQAKNAIDRLYRQGKLARVVVDEAHCVSSWGHDFRPDYKHLSYFKT 858
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA V+ D++ +L L++P+ LK SFNR NLFYEV KD + ++
Sbjct: 859 NYPEIPVMALTATANDHVKMDIIHNLNLKDPVFLKQSFNRTNLFYEVLNKDKDHMKHIEM 918
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
S+L D I+YC + C++ S L GI CA YHAG+ + R + W +
Sbjct: 919 -SILGKFKDQTGIIYCHSKNACEQTSDKLINSGIKCAFYHAGMTPEDRLDIQKAWQNGTI 977
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+V+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S ++YG D R
Sbjct: 978 KVICATIAFGMGIDKADVRFVIHLTLPRTLEGYYQETGRAGRDGNYSYCTMFYGFRDART 1037
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVSL 315
++ ++S+++ + + +K ++ Q++ YCE S CRR+++L+ F EQ
Sbjct: 1038 LQNMISRDKDLD-------KAGKEKHLTKLRQVIQYCENSTDCRRQQVLQYFNEQFHKDQ 1090
Query: 316 CKNSCDACK 324
C +CD CK
Sbjct: 1091 CAKNCDNCK 1099
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 667 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 726
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 727 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 784
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 785 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 844
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 845 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 904
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 905 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 957
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 958 LCHKNCDNCRN 968
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP binding
site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|317504966|ref|ZP_07962914.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
gi|315663848|gb|EFV03567.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
Length = 725
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 185/321 (57%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +++ SGK +LLYV PE ++ LK IH ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDNVRSGKT--KLLYVAPESLNKEEYVEFLKSIH----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + + P++ALTATA KV+ D+ +SL + + KSSFNR NL+YEVR
Sbjct: 157 PEYRNIRPTINKIGNAPVIALTATATDKVRTDIKKSLGIMDAHEFKSSFNRANLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D + ++ + I+YCL R +EL+ L A I A YHAGL+ RS
Sbjct: 217 K--TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANNIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ P C N CD C HP
Sbjct: 385 YFGEEYPHDNCHN-CDNCLHP 404
>gi|406866234|gb|EKD19274.1| QDE3-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1765
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 199/331 (60%), Gaps = 17/331 (5%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+VK+ I+ L P ++LLY+TPE+ +P ++ L +++ +G L + IDEAHC+S
Sbjct: 980 EVKSDIWSALREENPEQYIQLLYITPEMINKSPPMIAALTRLYKKGKLARIVIDEAHCVS 1039
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y L LR+ P VP++ALTATA V+ DVM +L ++ V SFNRPN
Sbjct: 1040 QWGHDFRPDYVALGRLRSDFPRVPLMALTATATSNVKDDVMTNLGMKGCPVFTQSFNRPN 1099
Query: 119 LFYEVRY---KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLS-AGGISCA 173
L+YEVR K +L ++ +++ + I+Y L + C++L+ L+ +
Sbjct: 1100 LYYEVRLKRGKGVLAKMVTEIVELVRDTYKNQTGIIYALSQKGCEDLAQKLANEHNLRAY 1159
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAG+N + +++VL DW + + QVVVAT+AFGMGID+ DVR V H ++PKS+E +YQE+
Sbjct: 1160 HYHAGMNREDKATVLQDWQTGKIQVVVATIAFGMGIDKPDVRFVIHSSVPKSLEGYYQET 1219
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD S LY+G D ++ + ++ Q R+R+ K+ MV YC
Sbjct: 1220 GRAGRDGKRSGCYLYFGYQDTSTLKKFIEDSEGNEDQ--KNRQRNMLKN------MVGYC 1271
Query: 294 EG-SGCRRKKILESFGEQIPVSLCKNSCDAC 323
E + CRR ++L FGE+ C+ SCD C
Sbjct: 1272 ENRTDCRRSQVLRYFGEKFSREDCRQSCDNC 1302
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|443316688|ref|ZP_21046123.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
gi|442783715|gb|ELR93620.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 6406]
Length = 720
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 199/328 (60%), Gaps = 19/328 (5%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
M+ +++ Y DL G+ +LLYV PE + F L ++ + L AIDEAHC+S W
Sbjct: 101 MEARSREY-DLLQGR--TKLLYVAPERLLSENFWPFLTRLQQQVGLAGFAIDEAHCVSEW 157
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP YR+L LR+ +P+LALTATA +V++D+++ L LQ P VL +SFNRPNL+
Sbjct: 158 GHDFRPEYRQLHRLRSAFAGIPMLALTATATERVRQDIVQQLQLQKPEVLVASFNRPNLY 217
Query: 121 YEVRYKDLLDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
YEVR KD Y L +++ NG I+YCL R DE++ L GI+ YHAGL
Sbjct: 218 YEVRPKD--RQTYGHLLQQVQSING--AGIIYCLSRKRVDEIALRLQNDGIAALPYHAGL 273
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
D R+ +I +V+VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD
Sbjct: 274 PDLTRAENQRRFIRDDVRVMVATIAFGMGINKPDVRFVVHYDLPRTLESYYQESGRAGRD 333
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCR 299
P+ +Y+G D + +++ + + Q+ + ++ Q++DY E + CR
Sbjct: 334 GEPAHCTVYFGYADVSTVNYLIDQKPDEREQNIARQQ---------LRQVIDYAESTVCR 384
Query: 300 RKKILESFGEQIPVSLCKNSCDACKHPN 327
R+ L FGE + S C + CD C+ P
Sbjct: 385 RQIQLGYFGEFLSES-C-DRCDNCRFPK 410
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 190/309 (61%), Gaps = 12/309 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ +KK+H+ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 656 LDLIYISPEMISASEQCKRGIKKLHNDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKR 715
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA+ +V+ DV+ +L L++P+ LK SFNR NLFY V K + A++
Sbjct: 716 EYPHVPMMALTATASEQVRLDVIHNLELKDPVFLKQSFNRKNLFYGVVRK--TKNTIAEI 773
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C + + I+YC + +C++ +A + GI CA YHAG+ RS V W +
Sbjct: 774 CESINTRFANQTGIIYCHSKNSCEQTAAQIQRNGIRCAFYHAGMEPDERSDVQRAWQNDD 833
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V H+ +P+++E +YQE+GRAGRD PS + YY D R
Sbjct: 834 LQVICATVAFGMGIDKADVRFVYHYTVPRTLEGYYQETGRAGRDGKPSFCITYYTFRDVR 893
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKKILESFGEQIPVS 314
++ ++ K+++ + + +K ++ ++ YCE G CRRK +L F E+
Sbjct: 894 SIQTMIQKDKNLDKD-------NKEKHLNKLQNVMMYCENGLDCRRKLVLSYFNEEFDAK 946
Query: 315 LCKNSCDAC 323
C +CD C
Sbjct: 947 DCHKNCDNC 955
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|325280334|ref|YP_004252876.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
gi|324312143|gb|ADY32696.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
Length = 727
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 196/360 (54%), Gaps = 32/360 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ED+ SGK ++LYV PE + LKKI ++ A+DEAHCIS WGHDFR
Sbjct: 104 VKEDILSGKT--KMLYVAPESLTKESNVEFLKKIK----ISFFAVDEAHCISEWGHDFRT 157
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YRK+ + + PI+ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR K
Sbjct: 158 EYRKIRPIVEEIGKAPIIALTATATPKVQNDIQKNLDMMDAQVFKSSFNRPNLYYEVRPK 217
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D D+ +K + I+YCL R +EL+ LS GI A YHAG++ RS+
Sbjct: 218 Q--GDVTKDIIKFIKNHEGKSGIIYCLSRKKVEELAEVLSINGIKAAPYHAGMDASTRST 275
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD L
Sbjct: 276 NQDRFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGICL 335
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
YY D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 336 TYYSFKDIQKLE--------KFMQGKPIAEQEIGKQL--LMETVAYAETSLCRRKVLLHY 385
Query: 307 FGEQIPVSLCKNSCDACKHPNLLAKYLGE--------LTSAVLQK---NHFSQIFISSQD 355
FGE C CD C +P ++ GE L S V +K H I I D
Sbjct: 386 FGETYEEDNC-GCCDNCLYPK--KEFEGEDYMVDALQLVSDVKEKFKIEHLVNILIGEAD 442
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance of
genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 184/310 (59%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLYVTPE+ + P F + ++ ++ RG + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 936 IELLYVTPEMVSMNPAFNNAMQTLYQRGKFARLVIDEAHCVSQWGHDFRPDYKSLGQVRM 995
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VPI+ALTATA V D+ +L + N V SFNRPNL+YEVR K +A +
Sbjct: 996 KFPEVPIMALTATATQNVIVDIKHNLNMANCQVFSQSFNRPNLYYEVRTKTSNSNATESI 1055
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S++ A + IVY + R +E++ L+ GI+ YHA ++ + + V W
Sbjct: 1056 ASLINAKYRNITGIVYTISRKQAEEVARKLAGHGIAARHYHAAIDPQEKVEVQTSWQKGD 1115
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ +VR V H +PKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 1116 IKVVVATIAFGMGIDKPNVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKADIR 1175
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ +++ N Q ++ + +++ +C+ S CRR ++L FGE S
Sbjct: 1176 VLKKLITDGDGNNEQ--------KERQMVMLNRVTAFCDNKSDCRRTEVLRYFGEDFVPS 1227
Query: 315 LCKNSCDACK 324
C+ SCD C+
Sbjct: 1228 QCRKSCDNCR 1237
>gi|156844324|ref|XP_001645225.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156115884|gb|EDO17367.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 1280
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 197/311 (63%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + K++S L+ + +DEAHC+S+WGHDFRP Y+ LS +
Sbjct: 627 LDLVYISPEMISASQQCKRAINKLYSSSKLSRIVVDEAHCVSNWGHDFRPDYKSLSFFKR 686
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA+ +V+ D++ +L + NPL LK SFNR NL Y+V+ K + ++
Sbjct: 687 EYPNIPLVALTATASEQVRMDIIANLEMHNPLTLKQSFNRTNLNYQVKAKS--KETINEI 744
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C++LK + I+YC + +C++++ +S I CA YHAG++ R + W ++
Sbjct: 745 CTLLKGRFKNQSGIIYCHSKNSCEQVAEQISQHKIRCAFYHAGIDPAERLQIQKAWQKNQ 804
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V H+ +P+++E +YQE+GRAGRD L S + Y+ D R
Sbjct: 805 IQVICATVAFGMGIDKPDVRYVFHYTVPRTLEGYYQETGRAGRDGLYSYCICYFSFKDVR 864
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ K+++ + + +K + Q+ YC+ + CRR +IL+ F E S
Sbjct: 865 TLQTMIQKDKNLD-------RINKQKHLEKLQQVASYCDNVTDCRRHQILKYFNEDFDPS 917
Query: 315 LCKNSCDACKH 325
LC+ +CD CK+
Sbjct: 918 LCEKNCDNCKN 928
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 187/309 (60%), Gaps = 18/309 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK+ + ++ VAIDEAHCIS WGHDFRP YR++ S+ +
Sbjct: 109 KLLYVAPESLTKEENVKFLKEAN----ISFVAIDEAHCISEWGHDFRPEYRRIKSIIAQI 164
Query: 79 PD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+ +PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NL+YEVR K + ++ +
Sbjct: 165 GEKLPIIALTATATPKVQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPK-IKNETKKQII 223
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K I+YCL R +E+++ L GI+ A YHAGL+ R DD+++
Sbjct: 224 KYIKGQKGKSGIIYCLSRKKVEEIASLLKVNGINAAPYHAGLDQNVRIKNQDDFLNEELD 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L L++Y DD ++
Sbjct: 284 VIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEGHCLMFYKYDDIIKL 343
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+ K ++ ER + K + +M Y E S CRRK +L FGE + C
Sbjct: 344 D--------KFNKDKPVTERENAKIL--LQEMAAYAESSICRRKTLLHYFGEYMEKD-C- 391
Query: 318 NSCDACKHP 326
CD CKHP
Sbjct: 392 GFCDNCKHP 400
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|224074554|ref|XP_002304389.1| predicted protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 191/323 (59%), Gaps = 24/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G+ L++LYVTPE ++ + FMSKL+K H+ G L+L++IDEAHC S WGHDFR
Sbjct: 175 IYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFR 234
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ +VP++ALTATA KVQ DVME L + + S+ NRPNLFY VR
Sbjct: 235 PDYKSLSILKTQFSNVPVVALTATATQKVQYDVMEMLRIPKCVKFVSTVNRPNLFYTVRS 294
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ +N ++ IVYC R C++++A L GI+ YHA ++
Sbjct: 295 KSSVGKVVVDEIAEFIQESYSNSES-GIVYCFSRKECEQVAAELRERGIAADYYHADMDV 353
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 354 NAREKVHTWWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 413
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
PS+ +L+Y D R S E S +++ D +V YC+ CRR
Sbjct: 414 PSECVLFYRPADVPR------------QSSMVFYENSGLQNLYD---IVRYCQSKRQCRR 458
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
F E P+ C CD C
Sbjct: 459 NAFFRHFAE--PLQDCNGMCDNC 479
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/315 (44%), Positives = 189/315 (60%), Gaps = 15/315 (4%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ + G M L ++ R L IDEAHC+S WGHDFR Y LS LR
Sbjct: 898 IQLLYVTPEMVSQSGQMGDILSSLNQRSKLARFVIDEAHCVSQWGHDFRKEYIALSRLRK 957
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK------DLLD 130
P VPI+ALTATA V+ DV+ +L + P + SFNRPNL+YEVR K +LL
Sbjct: 958 DFPSVPIMALTATATENVKNDVISNLGMGKPPIFSQSFNRPNLYYEVRPKSGRKMPELLK 1017
Query: 131 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLD 189
+ ADL + K G T I+Y L R C++++ LS IS YHAG+ + ++ V
Sbjct: 1018 E-IADLVT-RKYRGQT-GIIYTLSRKGCEDMAKKLSKEFNISVHYYHAGMKSEEKTKVTR 1074
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
DW S + QVVVAT+AFGMGID+ DVR V H+ IPKS+E +YQE+GRAGRD S LYY
Sbjct: 1075 DWQSGKLQVVVATIAFGMGIDKPDVRFVIHYTIPKSLEGYYQETGRAGRDGKKSGCYLYY 1134
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFG 308
D + + ++ +KN Q ST ++ + ++ M+ YC+ + CRR ++L FG
Sbjct: 1135 SWGDTVMLRKFIFESDTKNDQK-STDQKEREWAM--LQTMIGYCDNRADCRRMQVLRYFG 1191
Query: 309 EQIPVSLCKNSCDAC 323
E C++SCD C
Sbjct: 1192 ETFSKDNCRHSCDNC 1206
>gi|393789452|ref|ZP_10377573.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392650900|gb|EIY44566.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 726
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ ++ N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 217 KTTNIDR--DIIKFIRNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD K
Sbjct: 275 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVMHYDIPKSLEGYYQETGRAGRDGGEGKC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEDNCGN-CDNCLNPKKQVE-AQELLCAVIEAVIAVKENFKADYII--DILQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEIQAHLHEDLEVFGSGMGEED 464
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|326428091|gb|EGD73661.1| hypothetical protein PTSG_12303 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 195/340 (57%), Gaps = 11/340 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + I DL+S P+L+L+Y+TPE P +L+++ LL + A+DEAHC+S WG
Sbjct: 115 QQQGAILSDLESAAPTLKLVYITPESLLHPEMQRRLRRLDHLNLLGIFAVDEAHCVSQWG 174
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP++ +L L+ P +P+LA TATA V +DV+ L + P V++ + +RPNLFY
Sbjct: 175 HDFRPAFTRLGDLKAQFPHIPLLAATATAKRDVVRDVISILHMTQPTVIRGTVDRPNLFY 234
Query: 122 EVRYK-----DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
+ + +L+ + C IVY +R CD L+ L+ + AAYH
Sbjct: 235 QGTHAMEAWLELMPPRLSSRHRCCPVGPLPCGIVYVHKREDCDSLAGALAGCKLRTAAYH 294
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AG++ K R+ + W +R Q++VAT+AFGMGID+ DVR V H+N+ KSMEA+YQE+GRA
Sbjct: 295 AGVSPKQRADLQQQWTDNRIQIIVATIAFGMGIDKPDVRFVVHWNMSKSMEAYYQEAGRA 354
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD S LY+ ++D+ EF K ++ + + + + + + YC+ +
Sbjct: 355 GRDGKQSYCRLYFSLEDKSLHEFFFKKEVARAAAASK----KTSANPNSLHALGMYCQTA 410
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
CR + + FGE++ C + CD C P+ + + LG +
Sbjct: 411 ACRHVMLAQYFGEKL--KACASMCDFCTEPDAVRESLGRM 448
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 773 LDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 832
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV K + ++
Sbjct: 833 EYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKK--TKNTIFEI 890
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K+ + I+YC + +C++ SA + GI CA YHAG+ R SV W +
Sbjct: 891 CDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHAGMEPDERLSVQKAWQADE 950
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 951 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIR 1010
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1011 TMQTMIQKDKNLDRE-------NKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSK 1063
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 1064 LCHKNCDNCRN 1074
>gi|53715360|ref|YP_101352.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60683329|ref|YP_213473.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|265767847|ref|ZP_06095379.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|336412096|ref|ZP_08592554.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|375360137|ref|YP_005112909.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|383119914|ref|ZP_09940651.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|423252209|ref|ZP_17233211.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423252529|ref|ZP_17233460.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|423261243|ref|ZP_17242144.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267768|ref|ZP_17246748.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|423272323|ref|ZP_17251291.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423276779|ref|ZP_17255711.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|423283055|ref|ZP_17261940.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|52218225|dbj|BAD50818.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60494763|emb|CAH09569.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
gi|251944080|gb|EES84599.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|263252519|gb|EEZ24047.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|301164818|emb|CBW24378.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|335939268|gb|EGN01145.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|387774395|gb|EIK36507.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392647821|gb|EIY41518.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392660605|gb|EIY54214.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|392695515|gb|EIY88727.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392695991|gb|EIY89195.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392696027|gb|EIY89229.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|404581329|gb|EKA86028.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 726
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAHVFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 217 K--TQNVDKDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIETIIAVKENFKADYII--DVLQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|225450636|ref|XP_002282715.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Vitis
vinifera]
Length = 602
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 192/321 (59%), Gaps = 13/321 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+ ++L KPS +LLYVTPE + F LK +H +G L +DEAHC+S WGHDFR
Sbjct: 285 VLKELRKDKPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFR 344
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR+L L+ PDVP++ALTATA V+KD++ SL + + LVL++SF+R NL YEV
Sbjct: 345 PDYRELGCLKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIG 404
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKA 183
K + L +LK + C IVYCL ++ C E+S +L+ I YHAGL+ +
Sbjct: 405 K--TKEPLKQLGQLLKDRFKNLCGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQ 462
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R V W + + ++ AT+AFGMGI++ +VR V H + KS+E +YQESGRAGRD LP+
Sbjct: 463 RIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPA 522
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKK 302
+ Y D R+ +L S++F K++++ +M YCE + CRR+
Sbjct: 523 VCMALYQKKDFSRVVCMLRNGHGCKSETF-------KEAMTQARKMQQYCELKTECRRQT 575
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
+LE FGE + CKN C+ C
Sbjct: 576 LLEHFGESLDRKACKNGCNPC 596
>gi|395645604|ref|ZP_10433464.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
gi|395442344|gb|EJG07101.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
Length = 506
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 187/308 (60%), Gaps = 16/308 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+LRLL+++PE PG ++ L + R L+AIDEAHCIS+WGH FRP YR+LS L+
Sbjct: 106 ALRLLFLSPEKCMQPGLLTYLVQFPVR----LIAIDEAHCISAWGHTFRPEYRQLSGLKR 161
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
Y PDVPI+ALTATA P+V+ D+ + L L +P +F+RPNL Y V K+ A L
Sbjct: 162 YFPDVPIVALTATAIPEVRADIAQHLGLSDPGEFVGTFDRPNLRYAVVPKE---KPMALL 218
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + + IVYC + T ++L+ L G S AAYHAGL R V DD++S R
Sbjct: 219 LACINRHRKESGIVYCSSKKTAEDLARDLRKYGYSAAAYHAGLPTAVRERVQDDFLSGRV 278
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
Q V ATVAFGMGID+ DVR V H+++PK++E++YQE+GRAGRD L S+ LL Y +
Sbjct: 279 QTVCATVAFGMGIDKPDVRYVVHYDLPKNLESYYQETGRAGRDGLDSECLLLYSPGEYGA 338
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ ++ ++ + R ++ ++ +M+ YCE + CRRK +L FGE C
Sbjct: 339 VRSMIERDTPDS--------RQARIAVRKLDEMIGYCETTVCRRKYLLNYFGEAHAPETC 390
Query: 317 KNSCDACK 324
CD C+
Sbjct: 391 -GMCDTCE 397
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 192/327 (58%), Gaps = 18/327 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T + ++L KPS +LLYVTPE + F+ LK +H +G L +DEAHC+S WGHD
Sbjct: 291 TAVLQELRKDKPSCKLLYVTPERIAGNQSFLEILKFMHQKGQLAGFVVDEAHCVSQWGHD 350
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L SL+ + PDVP++ALTATA V++D++++L + + LVL+ SF+RPNL YEV
Sbjct: 351 FRPDYRGLGSLKLHFPDVPVMALTATATHAVREDILKALRIPHALVLERSFDRPNLKYEV 410
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLN 180
+ K+ L L + + C IVYCL ++ C E+S +L+ I YHAGL
Sbjct: 411 IAKTKEPLKQLGQLLIDRFR---NQCGIVYCLSKSECVEVSKFLNEKCKIKTVYYHAGLA 467
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
+ R +V W +V AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD
Sbjct: 468 ARQRVAVQKKWYDGEVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDN 527
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCR 299
PS + Y D R+ ++ Q +SF T +KK M +YCE + CR
Sbjct: 528 FPSVCIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKK-------MQEYCEIKAECR 580
Query: 300 RKKILESFGEQIPVSLCK---NSCDAC 323
R+ +L+ FGE CK + CD C
Sbjct: 581 RQTLLKHFGESFDRKDCKYGSSPCDNC 607
>gi|345317380|ref|XP_001519897.2| PREDICTED: ATP-dependent DNA helicase Q5 [Ornithorhynchus anatinus]
Length = 412
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/298 (44%), Positives = 184/298 (61%), Gaps = 11/298 (3%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
+L +P L+LLYVTPE+ A P F L + SR LL + +DEAHC+S WGHDFRP Y
Sbjct: 108 ELGRPEPRLKLLYVTPEMVAAPSFQPILNSLVSRRLLAYLVVDEAHCVSQWGHDFRPDYL 167
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL-VLKSSFNRPNLFYEVRYKDL 128
+L +LR LP P +ALTATA +V+ DV+ +L L+ P+ ++ R NLFY+V +KDL
Sbjct: 168 QLGALRARLPHTPCVALTATAPRQVRDDVVAALGLRQPIATFQTPCFRANLFYDVCFKDL 227
Query: 129 LDDAYADLCSV-LKANGDT--------CAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
L D +ADL L+A G+ C IVYC R CD+L+ LS G+ AYHAGL
Sbjct: 228 LSDPFADLWDFCLQALGERDARGAFSGCGIVYCRTREACDQLARELSYRGLEAKAYHAGL 287
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
R V ++W+ + V+VAT++FGMG+D+ +VR V H++I KSM +YQESGRAGRD
Sbjct: 288 KAAERVLVQNEWMEEKVPVIVATISFGMGVDKANVRCVAHWHIAKSMAGYYQESGRAGRD 347
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG 297
S LYY DR ++ F++ K ++ QS + S K ++ F +V +CE SG
Sbjct: 348 GKASWCRLYYSRKDRDQISFLIKKEIAR-LQSKRGHKDSDKAALKAFDVLVAFCEESG 404
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 194/325 (59%), Gaps = 14/325 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY+DL S P L+LLYVTPE ++++ F + L ++ R LL + IDEAHC+S+WGHDF
Sbjct: 734 RIYDDLYSSCPELKLLYVTPEKISSSAKFQNLLSALYRRSLLGRIVIDEAHCVSAWGHDF 793
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKSSFNRPNLFYEV 123
RP Y+KLS+LR P VPI+ALTATA P+V+ D++ L L ++ SFNRPNL Y V
Sbjct: 794 RPDYKKLSALREQFPTVPIIALTATANPRVRMDILAQLKLARDTRWFLCSFNRPNLKYLV 853
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + + + K IVYCL + CD+L+ GI +YHAGL+D
Sbjct: 854 LPKKGVSTKAEMIELIRKRFPRDTGIVYCLSKKECDQLADEFRRAGIKAKSYHAGLSDGV 913
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R + +WI R +VV AT+AFGMGID+ DVR V H+ +PKS+E +YQESGRAGRD +
Sbjct: 914 REATQKEWIGDRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEIA 973
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKK 302
+LYY D R ++ + S + + + + +++ +MV+YCE + CRR +
Sbjct: 974 TCVLYYNYSDMLRYRKMMDNDTSISLE-------AKQIHMNNLFRMVNYCENVTDCRRTQ 1026
Query: 303 ILESFGEQIPVSLC----KNSCDAC 323
LE F E C + +CD C
Sbjct: 1027 QLEYFAEYFTSEQCLANRETACDNC 1051
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 193/333 (57%), Gaps = 21/333 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L P ++LLYVTPE + G +S L+ ++ RGLL IDEAHC+S WGHDF
Sbjct: 727 RIYMQLSRKDPLIKLLYVTPEKVSASGRLISALQNLYERGLLARFIIDEAHCVSQWGHDF 786
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV- 123
RP +++L LR P V ++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 787 RPDFKRLHELRQKFPSVRMMALTATATPRVQKDILNQLNMMRPQVFTMSFNRSNLKYSVL 846
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+ K + +D + + K IVYCL R CD ++ L GI +YHAGL+D
Sbjct: 847 PKKPKKVDEDC---IGWIKKHYPRDSGIVYCLSRNDCDAMAESLKRAGIQALSYHAGLSD 903
Query: 182 KARSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 904 GDREYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDG 963
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCR 299
S +L+Y D R++ I+S ++ +S + +T ++ MV +CE CR
Sbjct: 964 EISHCILFYSYTDVHRIKRIISMDREGDSHTKATH-------FNNLHSMVHFCENVMECR 1016
Query: 300 RKKILESFGE-QIPVSLCKN----SCDACKHPN 327
R ++L FGE + CK+ SCD C PN
Sbjct: 1017 RIQLLAYFGELNFNRNFCKDHPDVSCDNCAKPN 1049
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 189/323 (58%), Gaps = 15/323 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ++L KPS +LLYVTPE AT F+ L+ +H + L +DEAHC+S WGHDFRP
Sbjct: 283 VLQELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLASFVVDEAHCVSQWGHDFRP 342
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L L+ PDVP++ALTATA V++DV+++L + + L+L+ SF+RPNL YEV K
Sbjct: 343 DYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCK 402
Query: 127 DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKAR 184
+ L +K + C IVYCL ++ C E+S L+ I A YHAGL + R
Sbjct: 403 --TKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQR 460
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V W Q+V AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD P+
Sbjct: 461 VLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPAS 520
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKKI 303
++ Y D R+ +L Q S+SF K S+S +M +CE CRR+ +
Sbjct: 521 CIVLYQKKDFSRVVCMLRNAQGFKSESF-------KMSMSQGKKMQQFCELKDQCRRQML 573
Query: 304 LESFGEQIPVSLCK---NSCDAC 323
L+ FGE CK N CD C
Sbjct: 574 LQHFGESFDRKACKYGSNPCDNC 596
>gi|440297665|gb|ELP90322.1| ATP-dependent RNA helicase DBP3, putative [Entamoeba invadens IP1]
Length = 809
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 179/316 (56%), Gaps = 11/316 (3%)
Query: 9 EDLDSGKPSLRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
ED+ + R++YV PEL + F+S +K+I+ +GL + + IDE HC+S WGHDFR S
Sbjct: 446 EDVRFNRRKYRVVYVAPELLDMSSNFISLMKQINEKGLFSYLVIDEVHCVSQWGHDFRES 505
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
Y KL R P V + TATA +V+ DV+ SL L+ LV +FNR NL Y+++YK
Sbjct: 506 YVKLRDFRKKFPSVQTIMFTATATERVKNDVLISLGLEEALVFNQTFNRVNLTYQIKYKS 565
Query: 128 LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSV 187
D D+ +K + C IV+C R C+++ L + I YHAG+ + R S+
Sbjct: 566 SQDQCVTDIIQYIKEHAGQCGIVFCFSRKDCEKMDESLKSSKIKSEYYHAGMKAEERKSI 625
Query: 188 LDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLL 247
D W+ VV ATVAFGMGID+ DVR V H +P S+E F+QESGRAGRD PS+ ++
Sbjct: 626 QDGWMKGTYDVVCATVAFGMGIDKADVRFVIHQTMPSSVEQFFQESGRAGRDGKPSECIV 685
Query: 248 YYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESF 307
YY D +++ ++ S + +N + R + M+D C+ CRR L F
Sbjct: 686 YYSQVDVKKIIWLKSGGKPENIEKVVER---------SLNAMIDLCQNKKCRRVAQLNYF 736
Query: 308 GEQIPVSLCKNSCDAC 323
GE+ + C + CD C
Sbjct: 737 GEKFEEAEC-SGCDVC 751
>gi|153809072|ref|ZP_01961740.1| hypothetical protein BACCAC_03380 [Bacteroides caccae ATCC 43185]
gi|423216745|ref|ZP_17203241.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149128405|gb|EDM19624.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392629275|gb|EIY23282.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 726
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/384 (39%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKSDILAGKT--KLLYVAPESLTKEENVDFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + IVYCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIVYCLSRKRVEELAEILQANGINARPYHAGMDSLTRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + +V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/324 (43%), Positives = 188/324 (58%), Gaps = 16/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+ ++L +G PS +LLYVTPE + FM L+ +H RGLL IDEAHC+S WGHDFR
Sbjct: 280 VMQELRNGTPSFKLLYVTPERMVGNYSFMEILRGLHQRGLLARFVIDEAHCVSQWGHDFR 339
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L L+ P VPI+ALTATA V+KD++ +L + N LVLK SF+R NL Y V
Sbjct: 340 PDYRALGCLKQNFPRVPIMALTATATEAVRKDILSTLRVPNALVLKRSFDRLNLNYMVIG 399
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKA 183
K L +LK + IVYCL + C + + +L I CA YHAGL +
Sbjct: 400 KT--KTPQMQLGELLKERFMNMSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQ 457
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+SV + W +V+ AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD LP+
Sbjct: 458 RTSVQEKWHRGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDDLPA 517
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKK 302
++ Y D R+ +L + S++F +KK M YCE + CRR+
Sbjct: 518 HCVVLYQKKDFSRIVCMLRNGDNFKSETFKVAMDQAKK-------MQAYCELKTECRRQT 570
Query: 303 ILESFGEQIPVSLCKNS---CDAC 323
+L FGEQ CK+ CD C
Sbjct: 571 LLAHFGEQYDRQRCKDGPSPCDNC 594
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 203/361 (56%), Gaps = 32/361 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G+ L++LYVTPE ++ + FMSKL+K H RG L+++AIDEAHC S WGHDFR
Sbjct: 178 IYKALEKGEEMLKILYVTPEKVSKSKRFMSKLEKCHHRGHLSIIAIDEAHCCSQWGHDFR 237
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+VP+LALTATA KVQ D+ME L + + S+ NRPNLFY VR
Sbjct: 238 PDYKNLGILKIQFPNVPVLALTATATQKVQYDLMEMLHIPKCVRFVSTVNRPNLFYMVRE 297
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ IVYC R C++++A L GIS YHA ++
Sbjct: 298 KSSVGKVVIDEIAEFIRESYPNNES-GIVYCFSRKECEQVAADLRERGISADYYHADMDV 356
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD
Sbjct: 357 NAREKVHMRWSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGA 416
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRR 300
PS+ +L++ D R S E S +++ D +V YC+ CRR
Sbjct: 417 PSECVLFFRPGDVPR------------QSSMVFYENSGLQNLYD---IVRYCQSKRTCRR 461
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGG 360
F E P+ C CD C N + + ++TS H + QDM D
Sbjct: 462 SAFFRHFSE--PLQDCNGMCDNCAFSNEVMEV--DVTS------HAKTMVSLLQDMHDND 511
Query: 361 Q 361
Q
Sbjct: 512 Q 512
>gi|167765436|ref|ZP_02437549.1| hypothetical protein BACSTE_03826 [Bacteroides stercoris ATCC
43183]
gi|167697064|gb|EDS13643.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 727
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 181/308 (58%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK + ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 115 KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + V KSSFNRPNL+YEVR K D D+
Sbjct: 171 GKAPLIALTATATPKVQHDIQKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDK--DIIK 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K N + I+YCL R +EL+ L A GI+ AYHAG++ R+ DD++ + V
Sbjct: 229 FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + + +Y D +++E
Sbjct: 289 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ C N
Sbjct: 349 --------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLHYFGEEYTEENCGN 398
Query: 319 SCDACKHP 326
CD C +P
Sbjct: 399 -CDNCLNP 405
>gi|329957341|ref|ZP_08297861.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328523054|gb|EGF50157.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 727
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 181/308 (58%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK + ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 115 KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + V KSSFNRPNL+YEVR K D D+
Sbjct: 171 GKAPLIALTATATPKVQHDIQKNLGMVEAQVFKSSFNRPNLYYEVRPKTANVDK--DIIK 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K N + I+YCL R +EL+ L A GI+ AYHAG++ R+ DD++ + V
Sbjct: 229 FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + + +Y D +++E
Sbjct: 289 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ C N
Sbjct: 349 --------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLHYFGEEYTEENCGN 398
Query: 319 SCDACKHP 326
CD C +P
Sbjct: 399 -CDNCLNP 405
>gi|344302418|gb|EGW32692.1| hypothetical protein SPAPADRAFT_49652 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1278
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/324 (38%), Positives = 190/324 (58%), Gaps = 12/324 (3%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE+ K ++K+++ G L V IDEAHC+SSWGHDFRP Y+ + +
Sbjct: 634 LDIVYLSPEMVIKSAMFQKVIEKLYNEGQLARVVIDEAHCLSSWGHDFRPDYKGMGLFKT 693
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD-DAYAD 135
P+VP++ALTATA +V+ DV+ L L NP+ K SFNR NLFYEV++K+ D D
Sbjct: 694 KFPNVPVMALTATANERVRADVITHLNLNNPVFFKQSFNRTNLFYEVQWKNANHLDVIKD 753
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ + + I+YC + +C++ S L+ G+ A YHAG++ + R V W ++
Sbjct: 754 Y--IFRKFKNKTGIIYCHSKQSCEQTSQRLNQLGLHSAYYHAGMSSEDRIEVQTQWQENK 811
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
V+ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD PS+ L+++ D
Sbjct: 812 VYVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECLMFFNTRDAH 871
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
+ ++ +++S N S RE K Q+V YCE CRRK++L F E
Sbjct: 872 HLRSMIIRDKSLNKMS---RESHMVK----LKQVVQYCENVIDCRRKQVLHYFNETFDPK 924
Query: 315 LCKNSCDACKHPNLLAKYLGELTS 338
LC CD C++ + + T+
Sbjct: 925 LCHQQCDNCRNSGSTTSFEKDFTT 948
>gi|429724940|ref|ZP_19259801.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
gi|429151402|gb|EKX94270.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
Length = 728
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 206/370 (55%), Gaps = 26/370 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I D+ +GK +LLYV+PEL F+ LK + ++ +A+DEAHCIS WGHDFRP
Sbjct: 104 IMNDVTTGK--TKLLYVSPELFNKDSFVDFLKTVR----VSFIAVDEAHCISEWGHDFRP 157
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YRKL + N + VPI+ALTATA KV+ D+ ++L + L KSSFNRPNL+YEVR K
Sbjct: 158 EYRKLRPIINEIGQVPIIALTATATDKVRMDIKKNLGIPEALEFKSSFNRPNLYYEVRQK 217
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D D+ +K + I+YCL R +EL+ L I+ AYHAGL+ + RS+
Sbjct: 218 TAKVDY--DVIRFIKNHPHVSGIIYCLSRKRVEELTEVLRTNDINACAYHAGLDAQVRSN 275
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 276 TQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCI 335
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKIL 304
+Y D +++E F + S++ I + Y E + CRRK +L
Sbjct: 336 AFYSHKDLQKLE------------KFMEGKPISEQDIGRQLLKETAAYAESAVCRRKLLL 383
Query: 305 ESFGEQIPVSLCKNSCDACKHPNLLAK---YLGELTSAVLQ-KNHFSQIFISSQDMTDGG 360
FGEQ +CD CKHP+ + YL + VL K +F +I + M +
Sbjct: 384 HYFGEQYESPDGCGNCDNCKHPHKQVEGKDYLCRVIETVLDCKENFRDDYIKNILMGNAT 443
Query: 361 QYSEFWNRDD 370
+ + DD
Sbjct: 444 EEIVAHHHDD 453
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 187/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LRN
Sbjct: 104 IKLLYISPERLLIETNFL--LKDIQ----ISLFAIDEAHCISQWGHDFRPEYTQLKVLRN 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA +KD+++ L L++P + SSF+RPNL EV+ D +
Sbjct: 158 QFPKVPIVALTATADKITRKDIVQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKMRTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + C I+YC+ R+ + ++A L GI YHAGL+ R +D+I+ R
Sbjct: 218 LEFIEKHKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+T + ++ +M Y E CRR+ +L FGE + C
Sbjct: 336 --VMLSK--------FATESSQQEINLEKLHRMQQYAESDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|355778305|gb|EHH63341.1| Bloom syndrome protein [Macaca fascicularis]
Length = 1338
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 726 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 785
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 786 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 845
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 846 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 905
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 906 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 965
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 966 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1018
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1019 QLLAYFGENGFNPDFCKKHPDVSCDNC 1045
>gi|317475725|ref|ZP_07934984.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316908108|gb|EFV29803.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 727
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 182/308 (59%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK + ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 115 KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR K D D+
Sbjct: 171 GKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDK--DIIK 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K N + I+YCL R +EL+ L A GI+ AYHAG++ R+ DD++ + V
Sbjct: 229 FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + + +Y D +++E
Sbjct: 289 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ C N
Sbjct: 349 --------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLHYFGEEYMEENCGN 398
Query: 319 SCDACKHP 326
CD C +P
Sbjct: 399 -CDNCLNP 405
>gi|218128449|ref|ZP_03457253.1| hypothetical protein BACEGG_00017 [Bacteroides eggerthii DSM 20697]
gi|217989340|gb|EEC55653.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 727
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 182/308 (59%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK + ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 115 KLLYVAPESLTKEENVEFLKTVK----ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR K D D+
Sbjct: 171 GKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRPKTANVDK--DIIK 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K N + I+YCL R +EL+ L A GI+ AYHAG++ R+ DD++ + V
Sbjct: 229 FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + + +Y D +++E
Sbjct: 289 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ C N
Sbjct: 349 --------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLHYFGEEYMEENCGN 398
Query: 319 SCDACKHP 326
CD C +P
Sbjct: 399 -CDNCLNP 405
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 746 TNIYLQLSKKDPIIKLLYVTPEKICASNRLVSTLENLYERKLLARFVIDEAHCVSQWGHD 805
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 806 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 865
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 866 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 986 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1038
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1039 QLLAYFGENGFNPDFCKEHPDVSCDNC 1065
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 187/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LRN
Sbjct: 104 IKLLYISPERLLIETNFL--LKDIQ----ISLFAIDEAHCISQWGHDFRPEYTQLKVLRN 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA +KD+++ L L++P + SSF+RPNL EV+ D +
Sbjct: 158 QFPKVPIVALTATADKITRKDIVQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKMRTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + C I+YC+ R+ + ++A L GI YHAGL+ R +D+I+ R
Sbjct: 218 LEFIEKHKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+T + ++ +M Y E CRR+ +L FGE + C
Sbjct: 336 --VMLSK--------FATESSQQEINLEKLHRMQQYAESDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 746 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERRLLARFVIDEAHCVSQWGHD 805
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 806 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 865
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G+S AYHAGL+D A
Sbjct: 866 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLSALAYHAGLSDSA 925
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R + WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 926 RDEIQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 986 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1038
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1039 QLLAYFGENGFNPDFCKKHADVSCDNC 1065
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 189/323 (58%), Gaps = 15/323 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ++L KPS +LLYVTPE AT F+ L+ +H + L +DEAHC+S WGHDFRP
Sbjct: 283 VLQELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRP 342
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L L+ PDVP++ALTATA V++DV+++L + + L+L+ SF+RPNL YEV K
Sbjct: 343 DYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCK 402
Query: 127 DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKAR 184
+ L +K + C IVYCL ++ C E+S L+ I A YHAGL + R
Sbjct: 403 --TKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQR 460
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V W Q+V AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD P+
Sbjct: 461 VLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPAS 520
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKKI 303
++ Y D R+ +L Q S+SF K S+S +M +CE CRR+ +
Sbjct: 521 CIVLYQKKDFSRVVCMLRNAQGFKSESF-------KMSMSQGKKMQQFCELKDECRRQML 573
Query: 304 LESFGEQIPVSLCK---NSCDAC 323
L+ FGE CK N CD C
Sbjct: 574 LQHFGESFDRKACKYGSNPCDNC 596
>gi|452005277|gb|EMD97733.1| hypothetical protein COCHEDRAFT_1190502 [Cochliobolus
heterostrophus C5]
Length = 485
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 30/357 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I DL G P RLLYVTPE F L+ IHS+ L +A+DEAHC+S WGHD
Sbjct: 103 RKRILADLQCGHPLTRLLYVTPEFCQGDHFRKILRVIHSQRELARIAVDEAHCVSEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFY 121
FRPS+++LS + PDVP++ LTATA +V+ D++ +L L + + + + +RPNL Y
Sbjct: 163 FRPSFQQLSFFKTEFPDVPVICLTATATARVRDDIINTLALDPKKLAMFRMTSSRPNLHY 222
Query: 122 EVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCDE 160
EVR+K +D Y D S+LK + I+Y L R C+
Sbjct: 223 EVRFKSDEEDHYDDFLSLLKGIYARRAERPERVTQLASQNQRTDNVPGIIYTLFRKDCES 282
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVC 218
L+ L + GI YHAGL+ R+ L WI+++ ++VAT AFGMGID+++VR V
Sbjct: 283 LAERLRSDGIGAKPYHAGLSVFERADALSGWIANKPGYDIIVATTAFGMGIDKENVRFVV 342
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN---QSKNSQSFSTR 275
H+ IPKS E FYQE+GRAGRD S +LYYG +DR R +++++ Q S +
Sbjct: 343 HWQIPKSFEGFYQEAGRAGRDGKASLCILYYGREDRDRAANMMARDMTRQPSKSGGADYQ 402
Query: 276 ERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
++ +V YCE + CR K I + F ++ P C +CD CK L +
Sbjct: 403 QQQLMNRARSLQALVGYCEATDKCRHKIIAKYFADEAPAP-CDFACDWCKDAEALVR 458
>gi|150003035|ref|YP_001297779.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212690531|ref|ZP_03298659.1| hypothetical protein BACDOR_00013 [Bacteroides dorei DSM 17855]
gi|237708012|ref|ZP_04538493.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|265754201|ref|ZP_06089390.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294775659|ref|ZP_06741167.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|319642190|ref|ZP_07996850.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|345515920|ref|ZP_08795417.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|345518199|ref|ZP_08797654.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|423229918|ref|ZP_17216323.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423241571|ref|ZP_17222683.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|423247008|ref|ZP_17228059.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|423314860|ref|ZP_17292792.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149931459|gb|ABR38157.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212666880|gb|EEB27452.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229436550|gb|EEO46627.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|229457998|gb|EEO63719.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|254836466|gb|EET16775.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|263234910|gb|EEZ20465.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294450503|gb|EFG18995.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|317386176|gb|EFV67095.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|392632709|gb|EIY26667.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|392633769|gb|EIY27707.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392641157|gb|EIY34942.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392681042|gb|EIY74404.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 726
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/390 (37%), Positives = 209/390 (53%), Gaps = 52/390 (13%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKSDILSGKT--KLLYVAPESLTKEENVDFLKGVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKV+ D+ ++L +Q+ KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPVIALTATATPKVRMDIQKNLGMQDAQEFKSSFNRPNLYYEVRS 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +KAN I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 217 K--TNNIDRDIIKFIKANPGKSGIIYCLSRKKVEELAEVLQANGINARAYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 ANQDGFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYSNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSICRRKSLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP----------------------NLLAKY-----LGELTS 338
FGE+ C N CD C +P N A Y LG+ TS
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVEAQDSLCAVIEAIIAVKENFKADYIIDILLGKETS 443
Query: 339 AVLQKNHFS-QIFISSQDMTDGGQYSEFWN 367
VL H ++F S G+ + WN
Sbjct: 444 EVLAHKHEELEVFGSGM-----GEEEKMWN 468
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 746 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 805
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 806 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 865
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 866 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1038
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1039 QLLAYFGENGFNPDFCKKHPDVSCDNC 1065
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 746 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 805
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 806 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 865
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 866 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1038
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1039 QLLAYFGENGFNPDFCKKHPDVSCDNC 1065
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 116 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 175
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 176 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 235
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 236 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 295
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 296 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 355
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 356 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 408
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 409 QLLAYFGENGFNPDFCKKHPDVSCDNC 435
>gi|395645903|ref|ZP_10433763.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
gi|395442643|gb|EJG07400.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
Length = 724
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/313 (41%), Positives = 185/313 (59%), Gaps = 16/313 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++R+L+++PE P F+S + + R L+AIDEAHCIS WGH+FRP YR+LS+LR
Sbjct: 106 TVRMLFISPEKCMQPSFLSFINRFPVR----LIAIDEAHCISEWGHNFRPEYRQLSALRE 161
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
+ P VPI+ALTATA P V++D+ L L + SFNRPNL Y V K+ + D
Sbjct: 162 HFPPVPIVALTATAIPAVREDICTQLQLSDVREYIGSFNRPNLSYRVVPKNKPVEFILDY 221
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + + I+YCL R ++L+ L G +AYHAGL + R V + +I
Sbjct: 222 ---IGQHPNDSGIIYCLSRKATEDLAETLVEHGHMASAYHAGLLPEVRKKVQEAFIKDDI 278
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
++ ATVAFGMGID+ DVR V H ++PKS+EA+YQESGRAGRD P + +L Y D +
Sbjct: 279 SIICATVAFGMGIDKPDVRYVIHHDLPKSVEAYYQESGRAGRDGQPGECILLYSRGDLAK 338
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ ++L + Q S + ++VDYCE + CRRK +L FGE+ P C
Sbjct: 339 VRYLLEHDDQDEEQ--------SGIAFKKMQEVVDYCETNSCRRKYLLAYFGEEYPGETC 390
Query: 317 KNSCDACKHPNLL 329
++CD C HP L
Sbjct: 391 -DACDNCTHPQEL 402
>gi|160882388|ref|ZP_02063391.1| hypothetical protein BACOVA_00337 [Bacteroides ovatus ATCC 8483]
gi|156112201|gb|EDO13946.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
Length = 749
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 214/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 126 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 179
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 180 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 239
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 240 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLTRT 297
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 298 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 357
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 358 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 407
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 408 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 463
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 464 ETSEVQAHLHEDLEVFGSGMGEED 487
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 185/324 (57%), Gaps = 17/324 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ D+ GK +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 KVRTDIREGKT--KLLYVAPESLNKEDNIEFLKTVK----VSFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + + PI+ALTATA KV+ D++ SL ++ +SSFNRPNL+YEVR
Sbjct: 157 PEYRKIRNAIEVIGRAPIIALTATATAKVRTDIVRSLGIEGCAEFRSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KKSEDDTNKQIIRFIKQHTGKSGIIYCLSRKKVEELAAVLLANDIKAAPYHAGLDSEVRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDQFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L++Y +D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 LVFYSRNDLKKLE--------KFMEGKPIAEQDIGRQL--LQETEAYAESSVCRRKLLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHPNLL 329
FGE+ P C CD C+HP L
Sbjct: 387 YFGEEYPKENC-GMCDNCRHPKTL 409
>gi|237719061|ref|ZP_04549542.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|293369500|ref|ZP_06616079.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|299148144|ref|ZP_07041206.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|336415756|ref|ZP_08596095.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423292370|ref|ZP_17270948.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|229451440|gb|EEO57231.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|292635385|gb|EFF53898.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|298512905|gb|EFI36792.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|335940635|gb|EGN02502.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392661779|gb|EIY55352.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 726
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 214/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLTRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 189/328 (57%), Gaps = 13/328 (3%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ K ++ + G P + LLYVTPE+ + F + ++ +H RG L + IDEAHCIS
Sbjct: 785 EYKRQVMAAFEEGIPEHHVELLYVTPEMVGKSTAFNNGMQTLHGRGKLARIVIDEAHCIS 844
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L +R P VP++ALTATA V D+ +L + SFNRPN
Sbjct: 845 QWGHDFRPDYKALGQVRQRYPGVPVMALTATATQNVIADIRHNLGMDRCQTFSQSFNRPN 904
Query: 119 LFYEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
L+YEVR K + + S+++ + IVY + R ++++ L+ GI YHA
Sbjct: 905 LYYEVRPKTTNNKTIDSIASLIRLQYRNQSGIVYTISRKNAEKVAESLTKQGIMARHYHA 964
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
++ + + V D W + +VVVATVAFGMGID+ DVR V H +PKS+E +YQE+GRAG
Sbjct: 965 HVDPREKVEVQDGWQRGQVKVVVATVAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAG 1024
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-S 296
RD PS +L+YG D R ++ +++ + Q ++ +S +++ +C+ S
Sbjct: 1025 RDGNPSDCILFYGKGDIRVLKKLIADGEGSEEQ--------KERQMSMLNRVTTFCDNRS 1076
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACK 324
CRR +IL FGE+ C+ +CD CK
Sbjct: 1077 DCRRAEILRYFGEEFTAGQCRKTCDNCK 1104
>gi|118579582|ref|YP_900832.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
gi|118502292|gb|ABK98774.1| ATP-dependent DNA helicase RecQ [Pelobacter propionicus DSM 2379]
Length = 714
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 183/309 (59%), Gaps = 18/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE P F+ +L + L L AIDEAHCIS WGHDFRP Y KL LR
Sbjct: 108 LDLLYVAPERLLLPDFLERLGGLK----LALFAIDEAHCISQWGHDFRPDYVKLGRLREL 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPI+A+TATA P+ ++D++ L ++ + + F+RPN+ Y V K L
Sbjct: 164 FPSVPIVAMTATADPETRRDIIRQLGIERATLFVAGFDRPNITYAVIPKQ---KPVNQLL 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
S LK GD IVY L R ++++ L G AAYHAGL D+ RS V D + +
Sbjct: 221 SFLKGRGDESGIVYALSRKRVEQVTERLQQAGFDAAAYHAGLPDRERSRVQDAFRRDDLR 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VVVATVAFGMGID+ +VR V H+++PKS+E++YQE+GRAGRD LPS++L+ +GM D
Sbjct: 281 VVVATVAFGMGIDKPNVRFVVHYDLPKSVESYYQETGRAGRDGLPSQALMLFGMGD---- 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+ +++ +NS + ER + + + MV Y E CRR+ +L FGEQ C
Sbjct: 337 -VMTARSLIENSDNA---ER-VRIELQKLNAMVSYAEALTCRRRALLAYFGEQRDDD-CG 390
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 391 N-CDICNDP 398
>gi|302811147|ref|XP_002987263.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
gi|300144898|gb|EFJ11578.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
Length = 711
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 144/344 (41%), Positives = 195/344 (56%), Gaps = 25/344 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L+ G +LR+LYVTPE A + FMSKL+K + G L+LVAIDEAHC S WGHDF
Sbjct: 158 EIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDF 217
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P VP++ALTATA +VQ+D+ E L + SS NRPNLFYEVR
Sbjct: 218 RPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVR 277
Query: 125 -YKDLLDDAYADLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K + D D+ +K + IVYC R C++++ L IS A YHA ++
Sbjct: 278 DKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDS 337
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R++V W S++ QV+V TVAFGMGI++ DVR V H + KS+E +YQESGRAGRD L
Sbjct: 338 GLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGL 397
Query: 242 PSKSLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CR 299
PS+ +LY+ D R + S+N + + M YC+ CR
Sbjct: 398 PSRCVLYFRPADVPRQSCMVFSEN----------------TGLQNLYAMARYCQSKQRCR 441
Query: 300 RKKILESFGEQIPVSLCKNSCDACKHPN-LLAKYLGELTSAVLQ 342
R + F EQ V C CD C N ++ K + E +++Q
Sbjct: 442 RAAFFQYFAEQ--VQECNGMCDTCAFENDVVEKDVTEYGKSLVQ 483
>gi|383114099|ref|ZP_09934864.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|423294544|ref|ZP_17272671.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|313694193|gb|EFS31028.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|392675735|gb|EIY69176.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 726
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 150/384 (39%), Positives = 214/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHAGMDSLTRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGK 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 746 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 805
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 806 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 865
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 866 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 925
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 926 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 985
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 986 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1038
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1039 QLLAYFGENGFNPDFCKKHPDVSCDNC 1065
>gi|50292717|ref|XP_448791.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528104|emb|CAG61761.1| unnamed protein product [Candida glabrata]
Length = 1371
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 124/327 (37%), Positives = 197/327 (60%), Gaps = 12/327 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ + + + ++K++ L + +DEAHC+S+WGHDFRP Y++LS +
Sbjct: 722 LDLIYLSPEMISVSEKCKTAIEKLYQNKQLARIVVDEAHCVSNWGHDFRPDYKQLSYFKV 781
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +VQ D++ +L L++ L L+ SFNR NL+YEVR K + ++
Sbjct: 782 QYPDIPMMALTATASEQVQMDIVFNLKLKDNLFLRQSFNRTNLYYEVRKK--TKNTIFEI 839
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K + I+YC + +C++ + + GI CA YHAG+ R V +W +
Sbjct: 840 CDTIKQQFRNQTGIIYCHSKNSCEQTAQQMQRNGIKCAYYHAGMEADERLQVQREWQNDN 899
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + YY D R
Sbjct: 900 LQVICATVAFGMGIDKADVRFVFHFTVPRTLEGYYQETGRAGRDGNYSYCITYYSFRDVR 959
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+ KN + +K + Q+ YCE + CRRK +L F E+
Sbjct: 960 TMQTMIQKD--KNLDGI-----NKQKHLDKLQQVTAYCENDTDCRRKLVLSYFSEEFDPI 1012
Query: 315 LCKNSCDACKHPNLLAKYLGELTSAVL 341
C +CD C++ + + K ++TS +
Sbjct: 1013 NCNKNCDNCRNSSSVTKEERDVTSTAI 1039
>gi|30692489|ref|NP_174421.2| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2
gi|11121445|emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana]
gi|332193225|gb|AEE31346.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 705
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 190/323 (58%), Gaps = 24/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y+ L+ G+ L++LYVTPE ++ + FMSKL+K H+ G L+L++IDEAHC S WGHDFR
Sbjct: 171 VYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFR 230
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ P VP++ALTATA KVQ D++E L + + SS NRPNLFY VR
Sbjct: 231 PDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVRE 290
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K L+ D A+ +N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 291 KSAVGKLVVDEIAEFIRESYSNNES-GIVYCFSRKECEQIAGDLRERGISADYYHADMDA 349
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 350 NMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 409
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
PS+ +L++ D R S E S +++ D +V YC+ + CRR
Sbjct: 410 PSECILFFRSADVPR------------QSSMVFYEYSGLQNLYD---IVRYCQSKTKCRR 454
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
FGE P C CD C
Sbjct: 455 SAFFRHFGE--PSQDCNGMCDNC 475
>gi|282896865|ref|ZP_06304871.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
gi|281198274|gb|EFA73164.1| ATP-dependent DNA helicase RecQ [Raphidiopsis brookii D9]
Length = 719
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 136/335 (40%), Positives = 202/335 (60%), Gaps = 19/335 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSR-GLLNLVAIDEAHCISSW 60
QV+++ E + +GK ++LLYV PE + F+ L + + GL N V IDEAHC+S W
Sbjct: 96 QVRSR-EEAIMNGK--VKLLYVAPERLVSERFLPILDVVKEKFGLANFV-IDEAHCVSEW 151
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP YR+L LR VP +ALTATA +V+ D+++ L L+ P V +SFNR NL+
Sbjct: 152 GHDFRPEYRQLILLRKRFSHVPTIALTATATDRVRADIIQQLGLKQPAVHIASFNRQNLY 211
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YEVR K+ ++Y ++ ++K N + I+YCL R DEL+ L I+ YHAGL
Sbjct: 212 YEVRPKN--RNSYGEILEIIKKN-EGSGIIYCLTRKNVDELTLKLQNSQIAALPYHAGLV 268
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
D+ R+ +I +++VAT+AFGMGI++ DVR V H ++P+++E++YQESGRAGRD
Sbjct: 269 DQERAKNQTRFIRDDVRIMVATIAFGMGINKPDVRFVIHCDLPRNLESYYQESGRAGRDG 328
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
PS+ L++ D + +E+ + K Q + ++ Q++DY EG+ CRR
Sbjct: 329 EPSRCTLFFSFSDVKTIEWSIGKKTDPQEQLIAKQQ---------LRQVIDYAEGTDCRR 379
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
L FGE+ P C N CD C++P L + E
Sbjct: 380 TIQLGYFGERFPGG-CAN-CDNCRYPKPLQDWTVE 412
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 372 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 431
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 432 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 491
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 492 LPKKPKKVAFDCLEWIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 551
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD
Sbjct: 552 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEI 611
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 612 SHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 664
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 665 QLLAYFGENGFNPDFCKKHPDVSCDNC 691
>gi|282898834|ref|ZP_06306821.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
gi|281196361|gb|EFA71271.1| ATP-dependent DNA helicase RecQ [Cylindrospermopsis raciborskii
CS-505]
Length = 719
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 202/335 (60%), Gaps = 19/335 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSR-GLLNLVAIDEAHCISSW 60
QV+++ E + +GK ++LLYV PE + F+ L + + GL N V IDEAHC+S W
Sbjct: 96 QVRSR-EEAIMNGK--VKLLYVAPERLVSERFLPILDVVKEKFGLANFV-IDEAHCVSEW 151
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP YR+L LR VP +ALTATA +V+ D+++ L L+ P V +SFNR NL+
Sbjct: 152 GHDFRPEYRQLILLRKRFSHVPTIALTATATDRVRADIIQQLGLKQPAVHIASFNRQNLY 211
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YEVR K+ ++Y ++ ++K N + I+YCL R DEL+ L I+ YHAGL
Sbjct: 212 YEVRPKN--RNSYGEILEIIKEN-EGSGIIYCLTRKNVDELTLKLQNSQIAALPYHAGLV 268
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
D R+ +I +++VAT+AFGMGI++ DVR V H ++P+++E++YQESGRAGRD
Sbjct: 269 DYERAKNQTRFIRDDVRIMVATIAFGMGINKPDVRFVIHCDLPRNLESYYQESGRAGRDG 328
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
PS+ L++ D + +E+ + K Q + ++ Q++DY EG+ CRR
Sbjct: 329 EPSRCTLFFSFGDVKTIEWSIGKKTDPQEQLIAKQQ---------LRQVIDYAEGTDCRR 379
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
L FGE+ P S C N CD C++P L + E
Sbjct: 380 TIQLGYFGERFPGS-CAN-CDNCRYPKPLQDWTVE 412
>gi|145324100|ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|332193226|gb|AEE31347.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 580
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 190/323 (58%), Gaps = 24/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y+ L+ G+ L++LYVTPE ++ + FMSKL+K H+ G L+L++IDEAHC S WGHDFR
Sbjct: 46 VYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFR 105
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ P VP++ALTATA KVQ D++E L + + SS NRPNLFY VR
Sbjct: 106 PDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVRE 165
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K L+ D A+ +N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 166 KSAVGKLVVDEIAEFIRESYSNNES-GIVYCFSRKECEQIAGDLRERGISADYYHADMDA 224
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 225 NMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 284
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
PS+ +L++ D R S E S +++ D +V YC+ + CRR
Sbjct: 285 PSECILFFRSADVPR------------QSSMVFYEYSGLQNLYD---IVRYCQSKTKCRR 329
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
FGE P C CD C
Sbjct: 330 SAFFRHFGE--PSQDCNGMCDNC 350
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 372 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 431
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 432 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 491
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 492 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 551
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 552 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 611
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 612 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 664
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 665 QLLAYFGENGFNPDFCKKHPDVSCDNC 691
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQGGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|340348782|ref|ZP_08671813.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
gi|339613206|gb|EGQ17991.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
Length = 727
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 184/319 (57%), Gaps = 21/319 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ +GK +LLYV PE + K + ++ AIDEAHCIS WGHDFRP YR
Sbjct: 107 DIQNGKT--KLLYVAPESLNKEESIEFFKTVK----VSFYAIDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + + PI+ALTATA KV+ D+++SL +++ KSSFNRPNL+YEVR K
Sbjct: 161 KIRQAIDQIGKAPIIALTATATDKVRTDIVKSLGIEDCAEFKSSFNRPNLYYEVRPKKNE 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+D + +K N I+YCL R +EL+A L A I A YHAGL+ + RS D
Sbjct: 221 EDTNRQIIKFIKQNLGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHAGLDSETRSKTQD 280
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
D++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD K +++Y
Sbjct: 281 DFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGKCIVFY 340
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESF 307
SKN K ++F + +++ I + Y E S CRRK +L F
Sbjct: 341 ------------SKNDLKKLENFMEGKPVAEQDIGRQLLQETETYAESSVCRRKLLLHYF 388
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE+ C CD C HP
Sbjct: 389 GEEYTKDNC-GMCDNCLHP 406
>gi|406901072|gb|EKD43834.1| hypothetical protein ACD_72C00100G0005 [uncultured bacterium]
Length = 619
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 24/320 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE--LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+YE LD + ++LLYV+PE L F+ L+ ++ ++L AIDEAHCISSWGHDF
Sbjct: 98 LYEQLD--RHEIKLLYVSPERLLGNNQQFLVYLRDLN----ISLFAIDEAHCISSWGHDF 151
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR LSSL+ PDVP +ALTATA + D++ L L+NP + SSFNRPN+ Y V
Sbjct: 152 RPEYRMLSSLKKDFPDVPTIALTATADNLTRDDILNKLKLKNPSIFVSSFNRPNINYSVE 211
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + Y ++ S LK + I+Y L R + ++++ L G S YHAGLN++ R
Sbjct: 212 PKRKM---YEEIVSYLKKHRSDSGIIYVLSRNSAEKMAEKLKKDGFSTKPYHAGLNNEKR 268
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ +I + +++VAT+AFGMGI++ +VR V H ++PK++E++YQE+GRAGRD L S+
Sbjct: 269 QRHQEMFIKDQVKIMVATIAFGMGINKSNVRFVIHADLPKNIESYYQETGRAGRDGLKSE 328
Query: 245 SLLYY-GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
++LYY G D + F + +N + ++ + SQM CE + CRR+ I
Sbjct: 329 AILYYSGGDVVKLKRFAMVENNPEQTRVM----------LHKLSQMATLCEANACRRRAI 378
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGE+ P C +SCD C
Sbjct: 379 LNYFGEEAP-DKC-DSCDVC 396
>gi|170092068|ref|XP_001877256.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648749|gb|EDR12992.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 758
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 215/422 (50%), Gaps = 47/422 (11%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K I +D+ S +P +RLLYVTPE T F L+ + LNL+ +DEAHC+S WGHD
Sbjct: 104 KKGIIKDMSSSRPKIRLLYVTPEKLLTQEFQPLLEGLFDDEQLNLLVVDEAHCVSEWGHD 163
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ--NPLVLKSSFNRPNLFY 121
FRP YR++ R +PI+ALTATA VQ+D++ SL + N FNR NL+Y
Sbjct: 164 FRPEYRRIGEFREKYVGIPIMALTATATEAVQEDIVRSLKMSKDNLFCALHPFNRDNLYY 223
Query: 122 EVRY------KDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCAA 174
+++Y + + D + + ++ + G + I+YC +R TCDELS+YL G+S
Sbjct: 224 QIKYLSAPDDRSKMADVFDYITTLYRRRGRASSGIIYCRKRVTCDELSSYLRGKGLSARP 283
Query: 175 YHAGLNDKARSSVLDDWISSRKQV-----------------------VVATVAFGMGIDR 211
YH G+ + L W V+AT+AFG+GID+
Sbjct: 284 YHRGIGSATLDATLKRWTGGGSGEEGSVDLVSFSHNYAHISTGIFLKVIATIAFGLGIDK 343
Query: 212 KDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---RRRMEFILSKNQSKN 268
DVR + H+++PKS E +YQE+GRAGRD LPSK +LYY +D +R+ I + N+ K
Sbjct: 344 GDVRYIIHYDVPKSFEGYYQETGRAGRDGLPSKCILYYSREDALYSKRLATISNANRVKE 403
Query: 269 SQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV-------SLCKNSC 320
++++I S ++ + E S CR I FGE I V + C C
Sbjct: 404 DNEGLP---PTQRAIDSISALIQFAESSTICRHVSICRYFGEAIDVTDKELVKTFCNRMC 460
Query: 321 DACKHPNLLAKYLGELTSAVLQKNHFSQIFI-SSQDMTDGGQYSEFWNRDDEASGSEEDI 379
D CK+PN + + + L+S + I ++Q+ G + W ++++ S
Sbjct: 461 DVCKYPNKVQQQISNLSSLEHASSRVDGYIIKAAQNNAHSGGDQQAWQKNNQRPQSRNSF 520
Query: 380 SD 381
D
Sbjct: 521 GD 522
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 185/309 (59%), Gaps = 13/309 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+RLLYVTPEL + F LK ++ + IDEAHC+S WGHDFRP Y++LS LR
Sbjct: 369 IRLLYVTPELLNNSDRFKGILKSLYCENKVCRFVIDEAHCVSQWGHDFRPDYKELSKLRQ 428
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA KV+ D++ L +QN + KSSFNRPNL Y V K D+
Sbjct: 429 SYPTVPIIALTATATKKVEVDIINVLNIQNCKIFKSSFNRPNLIYRVLPKTAT--TILDI 486
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S + ++ D+ I+YC + C++++ LS + YH GL+ R + + W +
Sbjct: 487 VSFINSHYADSPGIIYCTSKKECEKMAEELSR-DLKITYYHGGLSKYDRIRIQEQWNNKT 545
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+++ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L S +LYY D +
Sbjct: 546 YNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGLESICILYYSYADTK 605
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
+ F++++ S++T ++ + +V YCE CRRK++L+ F E+
Sbjct: 606 VINFLITR-------SYNTTAEQKQRQKEELFNVVKYCENKVECRRKQVLKYFNEEFSSD 658
Query: 315 LCKNSCDAC 323
+C +CD C
Sbjct: 659 MCNKTCDNC 667
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 760 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 819
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 820 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 879
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 880 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARD 939
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD S
Sbjct: 940 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISH 999
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T+E +++ MV YCE + CRR ++
Sbjct: 1000 CVLFYTYHDVTRLKRLIMMEKDGN---YHTKE----THVNNLYSMVHYCENITECRRIQL 1052
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1053 LAYFGEKGFNPDFCKKYPDVSCDNC 1077
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 191/325 (58%), Gaps = 25/325 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++++D+ SGK +LLYV PE ++ LK++ ++ AIDEAHCIS WGHDFR
Sbjct: 104 QVFDDIKSGKT--KLLYVAPESLIKDDYLDFLKEVK----ISFFAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L + + + +VP++ALTATA PKVQ D+ ++L + N LV K SFNRPNL+YEVR
Sbjct: 158 PEYRNLKQIIDKIANVPVIALTATATPKVQDDIQKTLGMTNALVFKESFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D ++ + + IVYCL R +E + L GI+ YHAGL+ K R
Sbjct: 218 KVNVD---KEIVKFINQHKGKSGIVYCLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRV 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 275 ANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L +Y D ++E L++ + S RE + +++V Y E S RR+ IL
Sbjct: 335 LAFYDPKDIEKLEKFLAQ------KPVSEREI----GLQLLNEVVGYAETSMSRRQYILY 384
Query: 306 SFGEQI-PVS-----LCKNSCDACK 324
FGE PV +C NS + K
Sbjct: 385 YFGESFDPVKGEGARMCDNSSNPPK 409
>gi|195172475|ref|XP_002027023.1| GL20982 [Drosophila persimilis]
gi|194112795|gb|EDW34838.1| GL20982 [Drosophila persimilis]
Length = 1017
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 200/347 (57%), Gaps = 17/347 (4%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
++ + ++ DL + K +L+ LY+TPE AT F L+ +H L A+DEAHC+S W
Sbjct: 98 LKERDRVIMDLRAVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQW 157
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNL 119
GHDFRP Y KL LR+ P++ LALTATA+ +V++D+ + L L P+ S+ + R NL
Sbjct: 158 GHDFRPDYLKLGELRSKYPEIVWLALTATASREVREDIYKQLRLHQPVAQFSTPSFRKNL 217
Query: 120 FYEVRYKDLLDDAYADLCSVLKA-NGDT------------CAIVYCLERTTCDELSAYLS 166
FY++ YK+ ++D + L + GD C I+YC R + ++ +S
Sbjct: 218 FYDIVYKNSIEDDFQHLADFAQHCLGDAKEFKAMPKPQRGCGIIYCRTRENVERVAVGVS 277
Query: 167 AGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSM 226
GI AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++
Sbjct: 278 KRGIGAVAYHAGLKTAERTGVQEAWMRGDQPIICATNSFGMGVDKASVRFVIHWDVPQNV 337
Query: 227 EAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDF 286
A+YQESGRAGRD L S LYYG +D R + F+L +N ++ +E +++++ F
Sbjct: 338 AAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDIHRARGRGDKELLTERALKQF 396
Query: 287 SQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++ ++CE + CR K + FG+ P C CD CK P K L
Sbjct: 397 EKISEFCEHTSCRHKLFADFFGD--PAPPCNGQCDVCKRPKNAEKAL 441
>gi|448524540|ref|XP_003871523.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis Co 90-125]
gi|380353345|emb|CCG26101.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis]
Length = 1068
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 190/314 (60%), Gaps = 14/314 (4%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE + K+ K++ R L V IDEAHC+SSWGHDFRP Y+ + +
Sbjct: 648 LDIVYLSPEKANKSTMIQKIIGKLYDRNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKE 707
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK--DLLDDAYA 134
P VPI+ALTATA KV+ D++ L + +P+ LK SFNR NL+YE+R+K + L+
Sbjct: 708 RFPAVPIMALTATANEKVRMDIVHHLKMNSPVYLKQSFNRTNLYYEIRWKSGNYLESMKD 767
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ S K + C I+YC + +C++ SA L++ G+ + YHAG+ + R + +W +
Sbjct: 768 YILSRYK---NKCGIIYCHSKQSCEQTSAKLNSFGLKTSFYHAGMTPEDRFKIQTNWQKN 824
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ Q++ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD PS+ ++YY D
Sbjct: 825 KIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDA 884
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
R ++ ++ ++ E + ++ Q+V YCE + CRRK++L F E
Sbjct: 885 RSLQNMIHRDA-------DLTEEGKENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFNP 937
Query: 314 SLCKNSCDACKHPN 327
CK CD CK+ N
Sbjct: 938 INCKKQCDNCKNYN 951
>gi|198465617|ref|XP_001353701.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
gi|198150241|gb|EAL29434.2| GA18497 [Drosophila pseudoobscura pseudoobscura]
Length = 1034
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 200/347 (57%), Gaps = 17/347 (4%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
++ + ++ DL + K +L+ LY+TPE AT F L+ +H L A+DEAHC+S W
Sbjct: 98 LKERDRVIMDLRAVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQW 157
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNL 119
GHDFRP Y KL LR+ P++ LALTATA+ +V++D+ + L L P+ S+ + R NL
Sbjct: 158 GHDFRPDYLKLGELRSKYPEIVWLALTATASREVREDIYKQLRLHQPVAQFSTPSFRKNL 217
Query: 120 FYEVRYKDLLDDAYADLCSVLKA-NGDT------------CAIVYCLERTTCDELSAYLS 166
FY++ YK+ ++D + L + GD C I+YC R + ++ +S
Sbjct: 218 FYDIVYKNSIEDDFQHLADFAQHCLGDAKEFKAMPKPQRGCGIIYCRTRENVERVAVGVS 277
Query: 167 AGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSM 226
GI AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++
Sbjct: 278 KRGIGAVAYHAGLKTAERTGVQEAWMRGDQPIICATNSFGMGVDKASVRFVIHWDVPQNV 337
Query: 227 EAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDF 286
A+YQESGRAGRD L S LYYG +D R + F+L +N ++ +E +++++ F
Sbjct: 338 AAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDIHRARGRGDKELLTERALKQF 396
Query: 287 SQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++ ++CE + CR K + FG+ P C CD CK P K L
Sbjct: 397 EKISEFCEHTSCRHKLFADFFGD--PAPPCNGQCDVCKRPKNAEKAL 441
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 747 TNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 806
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 807 FRQDYKRMNILRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 866
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 867 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSA 926
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 927 RDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 986
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 987 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 1039
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1040 QLLAYFGENGFNPDFCKKHPDVSCDNC 1066
>gi|189196824|ref|XP_001934750.1| ATP-dependent DNA helicase recQ [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980629|gb|EDU47255.1| ATP-dependent DNA helicase recQ [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 490
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 205/359 (57%), Gaps = 34/359 (9%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+T+I DL G P RLLYVTPE F L+ IHS+ L +A+DEAHC+S WGHD
Sbjct: 108 RTRIIADLQCGHPLTRLLYVTPEFCQGDNFRKILRIIHSQRELARIAVDEAHCVSEWGHD 167
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLK---SSFNRPNLF 120
FRPS+++LS + PDVP++ LTATA +V+ D++++L L +P LK S +RPNL
Sbjct: 168 FRPSFQQLSFFKTEFPDVPVICLTATATARVRDDIIKTLAL-DPKTLKMFRMSTSRPNLH 226
Query: 121 YEVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCD 159
YEVR+K +D Y + S LK+ + + I+Y L R C+
Sbjct: 227 YEVRFKSDDEDHYDNFISWLKSTHARRAADPERASQLSTQKQRSDNVPGIIYTLFRKDCE 286
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
L+A L A GI YHAGL+ R+ L W++++ VVVAT AFGMGID+++VR V
Sbjct: 287 SLAARLRADGIGAKPYHAGLSVSERADALSGWVANKAGYDVVVATTAFGMGIDKENVRFV 346
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRER 277
H+ IPKS E FYQE+GRAGRD S +LYYG +DR R +++++ ++ + +
Sbjct: 347 VHWQIPKSFEGFYQEAGRAGRDGKASLCILYYGREDRDRAASMMARDAARQPTKGAGVQV 406
Query: 278 SSKKSIS---DFSQMVDYCEGS-GCRRKKILESFG-EQIPVSLCKNSCDACKHPNLLAK 331
++ ++ +V YCE + CR K I + F E+ P C +CD CK L +
Sbjct: 407 QQQQLMNRAKSLQALVGYCEATDKCRHKLIAKYFADEEDPP--CDFACDWCKDAEGLVR 463
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 185/310 (59%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L LLYVTPE+ + F + L+ +H +G + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 932 LELLYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQ 991
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V D+ +L + + SFNRPNL+YEVR K + +
Sbjct: 992 KYPGVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESI 1051
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S++++N + IVY + R + ++++ LS GI+ YHAG + + + V + W +
Sbjct: 1052 ASLIQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQ 1111
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 1112 VKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIR 1171
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ +++ + Q ++ +S +++ +C+ S CRR +IL FGE +
Sbjct: 1172 VLKKLIADGDGSHEQ--------KERQMSMLNRVTAFCDNKSDCRRTEILRYFGEDFSPA 1223
Query: 315 LCKNSCDACK 324
C SCD CK
Sbjct: 1224 ECHKSCDNCK 1233
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 757 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 816
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 817 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 876
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 877 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARD 936
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD S
Sbjct: 937 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISH 996
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T+E +++ MV YCE + CRR ++
Sbjct: 997 CVLFYTYHDVTRLKRLIMMEKDGN---YHTKE----THVNNLYSMVHYCENITECRRIQL 1049
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1050 LAYFGEKGFNPDFCKKYPDVSCDNC 1074
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 761 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 820
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 821 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 880
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 881 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARD 940
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD S
Sbjct: 941 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISH 1000
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T+E +++ MV YCE + CRR ++
Sbjct: 1001 CVLFYTYHDVTRLKRLIMMEKDGN---YHTKE----THVNNLYSMVHYCENITECRRIQL 1053
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1054 LAYFGEKGFNPDFCKKYPDVSCDNC 1078
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 757 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 816
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 817 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 876
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 877 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARD 936
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD S
Sbjct: 937 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISH 996
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T+E +++ MV YCE + CRR ++
Sbjct: 997 CVLFYTYHDVTRLKRLIMMEKDGN---YHTKE----THVNNLYSMVHYCENITECRRIQL 1049
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1050 LAYFGEKGFNPDFCKKYPDVSCDNC 1074
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 185/310 (59%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L LLYVTPE+ + F + L+ +H +G + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 931 LELLYVTPEMVSKNANFNNGLQTLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQ 990
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V D+ +L + + SFNRPNL+YEVR K + +
Sbjct: 991 KYPGVPVMALTATATKNVIVDIRHNLGMDDCQTFSQSFNRPNLYYEVRPKSTGEKTIESI 1050
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S++++N + IVY + R + ++++ LS GI+ YHAG + + + V + W +
Sbjct: 1051 ASLIQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHAGCDPQEKVDVQNAWQRGQ 1110
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 1111 VKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAGRDGNPSDCILFYGKADIR 1170
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ +++ + Q ++ +S +++ +C+ S CRR +IL FGE +
Sbjct: 1171 VLKKLIADGDGSHEQ--------KERQMSMLNRVTAFCDNKSDCRRTEILRYFGEDFSPA 1222
Query: 315 LCKNSCDACK 324
C SCD CK
Sbjct: 1223 ECHKSCDNCK 1232
>gi|404406052|ref|ZP_10997636.1| ATP-dependent DNA helicase RecQ [Alistipes sp. JC136]
Length = 730
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 189/322 (58%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ D+ +GK +LLY PE ++ L KI ++ AIDEAHCIS WGHDF
Sbjct: 104 AQVRADVLAGKT--KLLYFAPESLTKEDNVAFLHKIK----VSFYAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 158 RPEYRRIRPIINEIGAAPLIALTATATPKVQLDIQKNLGMSDASVFKSSFNRANLYYEIR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +D D+ +K N I+YCL R +EL+ L A GI AYHAG++ R
Sbjct: 218 PKRNVD---RDIIRFIKQNEGKSGIIYCLSRKKVEELTELLVANGIRALAYHAGMDAVTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ DD++ R +V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AANQDDFLMERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGY 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 335 CLTFYSYKDIQKLE--------KFMQGKPIAEQEIGKLL--LLETVSYAESSMCRRKTLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE C N CD C++P
Sbjct: 385 HYFGEDYTEDNCGN-CDNCRNP 405
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 749 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLLSTLENLYERKLLARFVIDEAHCVSQWGHD 808
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 809 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYV 868
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 869 LPKKPKKVAFDCLEWIRKYHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 928
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 929 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 988
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 989 SHCLLFYTYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1041
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1042 QLLAYFGESGFNPDFCKKYPDVSCDNC 1068
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 188/325 (57%), Gaps = 16/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y +L +P L++LYVTPE ++A+ + L ++ R LL IDEAHC+S WGHDFR
Sbjct: 716 VYRELAKKEPILKILYVTPEKISASTKLCNTLTILYERELLARFVIDEAHCVSQWGHDFR 775
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L LR+ P VP +ALTATA P+V+ D++ L + NP S FNRPNL Y +
Sbjct: 776 PDYKRLKCLRDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSGFNRPNLRYSIIT 835
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + + + ++ +TC IVYCL R CD+ +A + GI +YHAGL D RS
Sbjct: 836 KKGKNCSDEVIAMIMTKYRNTCGIVYCLSRKDCDDYAAQMKKNGIKALSYHAGLTDNQRS 895
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ WI+ V+ AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD +
Sbjct: 896 NCQGRWIADEIHVICATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGEIADC 955
Query: 246 LLYYGMDDRRRM-EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
+L+Y D R+ + I NQS Q T + + +MV +CE + CRR
Sbjct: 956 ILFYHYADMHRIRKMIELDNQS--PQVIGTH-------MDNLFKMVAFCENTTDCRRSLQ 1006
Query: 304 LESFGE----QIPVSLCKNSCDACK 324
L FGE Q +S +CD C+
Sbjct: 1007 LNYFGEIFDRQQCISNKTTACDNCR 1031
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 195/327 (59%), Gaps = 11/327 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI+++L+S +LLYVTPE A + + L+ ++SRGLL IDEAHC+S WGHDF
Sbjct: 532 KIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDF 591
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 592 RPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 651
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D+ +K N D C I+YCL R C+++S L G A YH + +
Sbjct: 652 PK--TKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKTAFYHGSMEPEQ 709
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ + W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 710 RAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 769
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSF---STRERSSKKSISDFSQMVDYCEGS- 296
+LYYG D R++ ++S+ +QS + + ++ R + + + +MV YCE
Sbjct: 770 SCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASLGRILETNTENLLRMVSYCENEV 829
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L FGE+ + CK +CD C
Sbjct: 830 ECRRFLQLVHFGEKFDSTNCKKTCDNC 856
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 190/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 169 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 228
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y+V
Sbjct: 229 QDYKRMNVLRQKFPSVPVMALTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYDVLP 288
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 289 KKPKKVAFDCLSWIRKHHPYDSGIIYCLSRRECDTMALTLRKDGLAALAYHAGLSDSARD 348
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 349 EVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISH 408
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D R++ ++ + NS + T ++ MV YCE + CRR ++
Sbjct: 409 CLLFYSYHDVIRLKRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENIAECRRIQL 461
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE + CK +CD C
Sbjct: 462 LSYFGENGFNPNFCKEHLDVACDNC 486
>gi|296089753|emb|CBI39572.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 188/321 (58%), Gaps = 29/321 (9%)
Query: 15 KPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSS 73
KPS +LLYVTPE + F LK +H +G L +DEAHC+S WGHDFRP YR+L
Sbjct: 282 KPSCKLLYVTPERIAGNSTFFEILKSLHWKGQLAGFVVDEAHCVSQWGHDFRPDYRELGC 341
Query: 74 LRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK------- 126
L+ PDVP++ALTATA V+KD++ SL + + LVL++SF+R NL YEV K
Sbjct: 342 LKQNFPDVPVMALTATATQPVRKDILNSLRIPHALVLETSFDRSNLKYEVIGKTKEPLKQ 401
Query: 127 --DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKA 183
LL D + +L C IVYCL ++ C E+S +L+ I YHAGL+ +
Sbjct: 402 LGQLLKDRFKNL----------CGIVYCLSKSECAEVSKFLNGKCKIKTVYYHAGLSARQ 451
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R V W + + ++ AT+AFGMGI++ +VR V H + KS+E +YQESGRAGRD LP+
Sbjct: 452 RIDVQKKWHTGKVHIICATIAFGMGINKPNVRFVIHNTMSKSIENYYQESGRAGRDDLPA 511
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKK 302
+ Y D R+ +L S++F K++++ +M YCE + CRR+
Sbjct: 512 VCMALYQKKDFSRVVCMLRNGHGCKSETF-------KEAMTQARKMQQYCELKTECRRQT 564
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
+LE FGE + CKN C+ C
Sbjct: 565 LLEHFGESLDRKACKNGCNPC 585
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/325 (40%), Positives = 193/325 (59%), Gaps = 15/325 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K I +DL KP RLLYVTPE L + F LK++H++ L +DEAHC+S WGH
Sbjct: 456 KRAIQDDLRRPKPITRLLYVTPEMLGQSNAFKDILKQLHAKDQLARFVVDEAHCVSQWGH 515
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y L LR+ P VP +ALTATA +V+ D+ SL ++ + LKSSFNR NLFYE
Sbjct: 516 DFRPDYTNLGQLRDDFPGVPFMALTATANERVKSDIKNSLRMKGCVELKSSFNRKNLFYE 575
Query: 123 VRYKDLLDDAYADLCSVL--KANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGL 179
++ K+ YAD+ +++ K G T I+YC + C+++++ L G+ YHAGL
Sbjct: 576 IKPKN-GKTVYADIQNLINNKFRGQT-GIIYCSSKRACEDVASKLRHEYGLPAQHYHAGL 633
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R+ + +W +R ++ ATVAFGMGID+ DVR V HF++P+S+E +YQE+GRAGRD
Sbjct: 634 SRDDRTKIQINWQKNRFLIICATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQETGRAGRD 693
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGC 298
S +LY+ D + +++ + + Q + R S+ Q+V +C + C
Sbjct: 694 GEHSNCILYFAYKDTITINYLIDNGEGTHEQKATQR--------SNLRQVVQFCLNKTDC 745
Query: 299 RRKKILESFGEQIPVSLCKNSCDAC 323
RR ++L FGE C +CD C
Sbjct: 746 RRTQVLNYFGEHFDPRKCHKTCDNC 770
>gi|423239789|ref|ZP_17220905.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392645829|gb|EIY39552.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
Length = 605
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 186/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LRN
Sbjct: 104 IKLLYISPERLLIETNFL--LKDIQ----ISLFAIDEAHCISQWGHDFRPEYTQLKVLRN 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA +KD+ + L L++P + SSF+RPNL EV+ D +
Sbjct: 158 QFPKVPIVALTATADKITRKDIAQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKARTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + C I+YC+ R+ + ++A L GI YHAGL+ R +D+I+ R
Sbjct: 218 LEFIEKHKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+T + ++ +M Y E CRR+ +L FGE + C
Sbjct: 336 --VMLSK--------FATESSQQEINLEKLHRMQQYAESDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|357043893|ref|ZP_09105579.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
gi|355367947|gb|EHG15373.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
Length = 727
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/376 (39%), Positives = 206/376 (54%), Gaps = 24/376 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SG+ +LLYV PE M LK + ++ AIDEAHCIS WGHDFRP YR
Sbjct: 107 DILSGRT--KLLYVAPESLNKEENMEFLKSVK----ISFYAIDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR K
Sbjct: 161 KIRHAIETIGLAPVIALTATATDKVRTDIIRSLGIEDCAEFKSSFNRPNLYYEVRPKKND 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS D
Sbjct: 221 DDTNKQIIKFIKQHAGKSGIIYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRSKTQD 280
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
D++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +++Y
Sbjct: 281 DFLMEEIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICVVFY 340
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
+D +++E K + E+ + + + Y E S CRRK +L FGE
Sbjct: 341 SKNDLKKLE--------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLHYFGE 390
Query: 310 QIPVSLCKNSCDACKHPNLLAK---YLGELTSAVLQ-KNHFSQIFI---SSQDMTDGGQY 362
+ C CD C HP + YL + AV + K +F Q ++ TD +
Sbjct: 391 EYAKCNC-GMCDNCLHPKTKIEGKDYLLTILKAVKELKENFRQEYVIDFVKGRATDDQKD 449
Query: 363 SEFWNRDDEASGSEED 378
+ DD +G +ED
Sbjct: 450 HKHDELDDFGAGEDED 465
>gi|313149548|ref|ZP_07811741.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313138315|gb|EFR55675.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 734
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 111 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 164
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 165 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAHVFKSSFNRPNLYYEVRP 224
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 225 K--TQNVDKDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 282
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D+++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 283 QNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 342
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 343 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 392
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 393 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIETIIAVKENFKADYII--DVLQGR 448
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 449 ETSEVQAHLHEDLEVFGSGMGEED 472
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 183/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ +LY+TPE L+ + + L+K+H R L + IDEAHC+S WGHDFRP Y++L +R
Sbjct: 745 MEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKELGEVRA 804
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V+ DVM +L + + V SFNRPNL YEVR K D+ A +
Sbjct: 805 RFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKNDEVLASM 864
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+ ++ + C I+YCL R TCD+++ L + AYHAG++ K +S W
Sbjct: 865 AETITSSYQNQCGIIYCLSRKTCDKVAEDLQKKYHLKALAYHAGMSAKVKSEAQRKWQMG 924
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R ++VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LY+G D
Sbjct: 925 RVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAGRDGKRSGCYLYFGYKDT 984
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
++ ++ Q ++ +K + +V YCE S CRR ++L F E
Sbjct: 985 ATLKRMIDAGDGNGQQ------KARQKQM--LRNVVQYCENRSDCRRVQVLAYFAEYFRR 1036
Query: 314 SLCKNSCDACK 324
C N+CD CK
Sbjct: 1037 EDCNNTCDNCK 1047
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 183/310 (59%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L LLYVTPE+ + F S L+ +H +G + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 926 LELLYVTPEMVSKNVNFNSGLETLHRKGKFARLVIDEAHCVSQWGHDFRPDYKILGQVRQ 985
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V D+ +L + N + SFNRPNL+YEVR K + +
Sbjct: 986 KYPGVPVMALTATATKNVIVDIRHNLGMDNCQIFSQSFNRPNLYYEVRPKTTNEKVMDAI 1045
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S++ + + IVY + R ++++ LS GI+ YHAG + + + V + W
Sbjct: 1046 SSLIHSRYANQSGIVYTISRKNAEKVAESLSGNGITARFYHAGCDPQEKVEVQNSWQRGH 1105
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 1106 VKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGNPSDCILFYGKADIR 1165
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ +++ + Q ++ +S +++ +C+ S CRR +IL FGE +
Sbjct: 1166 VLKKLIADGDGSHDQ--------KERQMSMLNRVTAFCDNKSDCRRTEILRYFGEDFSAA 1217
Query: 315 LCKNSCDACK 324
C+ SCD CK
Sbjct: 1218 QCRKSCDNCK 1227
>gi|423280579|ref|ZP_17259491.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|424665170|ref|ZP_18102206.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404575034|gb|EKA79779.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404583786|gb|EKA88459.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 726
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAHVFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + D+ +K N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 217 K--TQNVDKDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D+++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 QNQDNFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYTEENCGN-CDNCLNPKKQVE-AQELLCAVIETIIAVKENFKADYII--DVLQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 195/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + K++ L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 731 LDLIYISPEMISASEQCKKAIGKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKYFKR 790
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA+ +V+ D++ +L L NP+ LK SFNR NL+YEV K + D+
Sbjct: 791 EYPDIPMIALTATASEQVRLDIVHNLQLNNPVFLKQSFNRTNLYYEVLKKS--KNVVFDI 848
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C+ +K + I+YC + +C++ ++ L GI+ A YHAG+ R V W ++R
Sbjct: 849 CNAVKTRFKNQTGIIYCHSKNSCEQTASLLQRNGINSAYYHAGMEPDERLEVQQAWQANR 908
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+++ ATVAFGMGID+ DVR V H IP+++E +YQE+GRAGRD S ++YY D R
Sbjct: 909 IRIICATVAFGMGIDKPDVRFVYHLTIPRTLEGYYQETGRAGRDGKFSFCIMYYTFRDVR 968
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
M+ ++ K+++ + + + +K ++ Q++ YCE + CRR+ +L F E +
Sbjct: 969 TMQTMIQKDKNLDRE-------NKEKHLTKLQQVMQYCENLADCRRQLVLSYFNENFDSA 1021
Query: 315 LCKNSCDACKH 325
LC+ +CD CK+
Sbjct: 1022 LCRRNCDNCKN 1032
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 189/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 783 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 842
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++L+ LR+ P V ++ALTATA P+VQKD++ L + NP V SFNR NL Y V
Sbjct: 843 QDYKRLNMLRHKFPSVSMMALTATANPRVQKDILTQLKILNPQVFSMSFNRHNLKYSVLP 902
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 903 KKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARD 962
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 963 EVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGEMSH 1022
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D R++ ++ + NS + T ++ MV YCE CRR ++
Sbjct: 1023 CLLFYNYHDVTRLKRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENIIECRRIQL 1075
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE + CK +CD C
Sbjct: 1076 LSYFGESGFNPNFCKEYPDVTCDNC 1100
>gi|212693848|ref|ZP_03301976.1| hypothetical protein BACDOR_03370 [Bacteroides dorei DSM 17855]
gi|237708472|ref|ZP_04538953.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
gi|212663600|gb|EEB24174.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229457401|gb|EEO63122.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
Length = 605
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 186/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LRN
Sbjct: 104 IKLLYISPERLLIETNFL--LKDIQ----ISLFAIDEAHCISQWGHDFRPEYTQLKVLRN 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA +KD+ + L L++P + SSF+RPNL EV+ D +
Sbjct: 158 QFPKVPIVALTATADKITRKDIAQQLVLKDPKIFISSFDRPNLSLEVKRGYQQKDKARTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + C I+YC+ R+ + ++A L GI YHAGL+ R +D+I+ R
Sbjct: 218 LEFIEKHKNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+T + ++ +M Y E CRR+ +L FGE + C
Sbjct: 336 --VMLSK--------FATESSQQEINLEKLHRMQQYAESDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|5410427|gb|AAD43051.1|AF134239_1 Recq helicase 5 [Drosophila melanogaster]
Length = 1057
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL 441
>gi|344201636|ref|YP_004786779.1| RecQ familyATP-dependent DNA helicase [Muricauda ruestringensis DSM
13258]
gi|343953558|gb|AEM69357.1| ATP-dependent DNA helicase, RecQ family [Muricauda ruestringensis
DSM 13258]
Length = 733
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 23/307 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ G +LLYV PE + LK + L+ VA+DEAHCIS WGHDFR
Sbjct: 104 QVKEDITKG--VTKLLYVAPESLTKEENVDFLKNVK----LSFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L + N L D +PI+ LTATA PKVQ+D++++L + + V K+SFNRPNLFYEVR
Sbjct: 158 PEYRNLRGIINRLGDNIPIIGLTATATPKVQEDIIKNLGMTDAKVFKASFNRPNLFYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D AD+ +K N I+YCL R +EL+ L G+S YHAG + K R
Sbjct: 218 PK--TKDVDADIIRFVKQNQGKSGIIYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 SKYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L YY D ++E F + + +++ I + ++V Y E S RRK
Sbjct: 336 CLAYYAYKDVEKLE------------KFMSGKPVAEQEIGNALLQEIVAYAETSMSRRKF 383
Query: 303 ILESFGE 309
IL FGE
Sbjct: 384 ILHYFGE 390
>gi|189182194|gb|ACD81873.1| RE21659p [Drosophila melanogaster]
Length = 1058
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL 441
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 191/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 758 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 817
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 818 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 877
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 878 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARD 937
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKSME +YQESGRAGRD S
Sbjct: 938 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISH 997
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T+E +++ MV YCE + CRR ++
Sbjct: 998 CVLFYTYHDVTRLKRLIMMEKDGN---YHTKE----THVNNLYSMVHYCENITECRRIQL 1050
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1051 LAYFGEKGFNPDFCKKYPDVSCDNC 1075
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 188/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 758 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 817
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 818 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYV 877
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 878 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 937
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 938 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 997
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 998 SHCLLFYTYHDVTRLKRLILMEKDGNRHTRETH-------FNNLYSMVHYCENITECRRI 1050
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1051 QLLAYFGENGFNPDFCKKYPDVSCDNC 1077
>gi|24664226|ref|NP_729983.1| homolog of RecQ, isoform B [Drosophila melanogaster]
gi|6573299|dbj|BAA88313.1| DNA helicase RECQE [Drosophila melanogaster]
gi|23093483|gb|AAN11801.1| homolog of RecQ, isoform B [Drosophila melanogaster]
Length = 1058
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL 441
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 186/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LRN
Sbjct: 104 IKLLYISPERLLIETNFL--LKDIQ----ISLFAIDEAHCISQWGHDFRPEYTQLKVLRN 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA +KD+ + L L++P + SSF+RPNL EV+ D +
Sbjct: 158 QFPKVPIVALTATADKITRKDIAQQLALKDPKIFISSFDRPNLSLEVKRGYQQKDKARTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + + C I+YC+ R+ + ++A L GI YHAGL+ R +D+I+ R
Sbjct: 218 LEFIEKHKNECGIIYCMSRSKTESVAAMLMKQGIRATVYHAGLSSDMRDKAQNDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+T + ++ +M Y E CRR+ +L FGE + C
Sbjct: 336 --VMLSK--------FATESSQQEINLEKLHRMQQYAESDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|154253433|ref|YP_001414257.1| ATP-dependent DNA helicase RecQ [Parvibaculum lavamentivorans DS-1]
gi|154157383|gb|ABS64600.1| ATP-dependent DNA helicase RecQ [Parvibaculum lavamentivorans DS-1]
Length = 633
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 190/323 (58%), Gaps = 25/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I E L +G+ L LLYVTPE A+ GF+S L ++ L L AIDEAHCIS WGHDFRP
Sbjct: 132 IREALTAGE--LDLLYVTPERLASDGFISFLARVP----LALFAIDEAHCISQWGHDFRP 185
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y +L L+ PDVP LALTATA P+ + D++ L L + + +SF+RPN+ Y + K
Sbjct: 186 EYLQLGRLKERFPDVPRLALTATADPQTRDDLVHRLQLDDARIFSASFDRPNIRYTIVRK 245
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D +A + L LKA+ IVYCL R +E + +L+A GI YHAGL+ R
Sbjct: 246 D---NAKSQLRDFLKAHEGASGIVYCLSRKKVEETADWLTAQGILALPYHAGLDRSIRDK 302
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ V+VAT+AFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS +
Sbjct: 303 HQDAFLKDEGPVLVATIAFGMGIDKPDVRFVAHLDLPSSIEAYYQETGRAGRDGLPSDAW 362
Query: 247 LYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +GM D RRRM ++ + + ER+ ++ CE + CRR+ +
Sbjct: 363 MAWGMSDVSLRRRM-----IDEGASPELVKQVERTK------LDALLHVCETATCRRQAL 411
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C N CDAC P
Sbjct: 412 LAHFGES-HAGACGN-CDACLTP 432
>gi|255690572|ref|ZP_05414247.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|423301599|ref|ZP_17279622.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|260624034|gb|EEX46905.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|408471592|gb|EKJ90123.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 726
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 188/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVRSDILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQVFKSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N + I+YCL R +EL+ L A GI+ YHAG++ R+
Sbjct: 217 KTANIDR--DIIKFIKNNPEKSGIIYCLSRKRVEELAEILQANGINARPYHAGMDSVTRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 KNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 385 YFGEEYTEENCGN-CDNCLNP 404
>gi|313205605|ref|YP_004044782.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383484930|ref|YP_005393842.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312444921|gb|ADQ81276.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459615|gb|AFD55299.1| ATP-dependent DNA helicase recq [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 734
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 191/314 (60%), Gaps = 21/314 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+K +++ D++SG+ +LLYV PE ++ LK+ + ++ VAIDEAHCIS WG
Sbjct: 101 QIK-QVFNDINSGRT--KLLYVAPESLIKEDYLDFLKQAN----ISFVAIDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR L + + + +VP++ALTATA PKVQ D+ ++L + + +V K SFNRPNLFY
Sbjct: 154 HDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMSDAVVFKESFNRPNLFY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K D ++ + N IVYCL R +E + L GI+ YHAGL+
Sbjct: 214 EVRPKV---DVEKEIVKFINKNKGKSGIVYCLSRKKVEEFAQTLQVNGINALPYHAGLDQ 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R + D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 271 KTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L +Y D ++E L++ +S S +E + +++V Y E S RR+
Sbjct: 331 EGHCLAFYDPKDIEKLEKFLAQ------KSVSEKEV----GLQLLNEVVGYAETSMSRRQ 380
Query: 302 KILESFGEQI-PVS 314
IL FGE+ P++
Sbjct: 381 YILYYFGEEFDPIN 394
>gi|297851930|ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 190/323 (58%), Gaps = 24/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y+ L+ G+ L++LYVTPE ++ + FMSKL+K H+ G L+L++IDEAHC S WGHDFR
Sbjct: 170 VYKALEKGEHDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFR 229
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ P VP++ALTATA KVQ D++E L + + SS NRPNLFY VR
Sbjct: 230 PDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVRE 289
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ +N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 290 KSAVGKVVVDEIAEFIRESYSNNES-GIVYCFSRKECEQIAGDLRERGISADYYHADMDA 348
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 349 NMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 408
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
PS+ +L++ D R S E S +++ D +V YC+ + CRR
Sbjct: 409 PSECILFFRSADVPR------------QSSMVFYEYSGLQNLYD---IVRYCQSKTKCRR 453
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
FGE P C CD C
Sbjct: 454 SAFFRHFGE--PSQDCNGMCDNC 474
>gi|302789379|ref|XP_002976458.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
gi|300156088|gb|EFJ22718.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
Length = 711
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 195/344 (56%), Gaps = 25/344 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L+ G +LR+LYVTPE A + FMSKL+K + G L+LVAIDEAHC S WGHDF
Sbjct: 158 EIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDF 217
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P VP++ALTATA +VQ+D+ E L + SS NRPNLFYEVR
Sbjct: 218 RPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVR 277
Query: 125 -YKDLLDDAYADLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K + D D+ +K + IVYC R C++++ L IS A YHA ++
Sbjct: 278 DKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDS 337
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R++V W S++ QV+V TVAFGMGI++ DVR V H + KS+E +YQESGRAGRD L
Sbjct: 338 GLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGL 397
Query: 242 PSKSLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CR 299
PS+ +L++ D R + S+N + + M YC+ CR
Sbjct: 398 PSRCVLFFRPADVPRQSCMVFSEN----------------TGLQNLYAMARYCQSKQRCR 441
Query: 300 RKKILESFGEQIPVSLCKNSCDACKHPN-LLAKYLGELTSAVLQ 342
R + F EQ V C CD C N ++ K + E +++Q
Sbjct: 442 RAAFFQYFAEQ--VQECNGMCDTCAFENDVVEKDVTEYGKSLVQ 483
>gi|195454807|ref|XP_002074414.1| GK10589 [Drosophila willistoni]
gi|194170499|gb|EDW85400.1| GK10589 [Drosophila willistoni]
Length = 983
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 138/375 (36%), Positives = 212/375 (56%), Gaps = 22/375 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K +++ LY+TPE AT F L+ ++ L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVKTNIKFLYITPEQAATKFFQDLLQLLYKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS--SFNRPNLFY 121
FRP Y KL LR DV LALTATA+ +V++D+ + L LQ P+ S SF R NLFY
Sbjct: 161 FRPDYLKLGDLRIKYKDVVWLALTATASKEVREDIYKQLRLQTPVAQFSTPSFRR-NLFY 219
Query: 122 EVRYKDLLDDAYADLCSV----------LKANGDT---CAIVYCLERTTCDELSAYLSAG 168
++ YK+ ++D + L K + C I+YC R + ++ +S
Sbjct: 220 DIVYKNSIEDDFQHLAEFAHHCLGDPKEFKGTPKSQRGCGIIYCRTRDQVERVAVGVSKQ 279
Query: 169 GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEA 228
G+ AYHAGL R+ V + W+ ++ AT +FGMG+D+ VR V H++ P+++ A
Sbjct: 280 GVGAVAYHAGLKTAERTQVQESWMEGVHPIICATNSFGMGVDKPSVRFVIHWDCPQNIAA 339
Query: 229 FYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQ 288
+YQESGRAGRD L S LYYG +D + + F+L ++ S+ ++ RE +++++ F +
Sbjct: 340 YYQESGRAGRDGLQSYCRLYYGREDVKSIRFLLQQD-SQRARGRGDRELLTERALKQFEK 398
Query: 289 MVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHF-S 347
+VD+CE CR + + FG+ P C CD CK P + K L E+ + N F S
Sbjct: 399 IVDFCERVSCRHRLFADFFGD--PPPQCNGQCDVCKRPKRVEKAL-EMFHRLCMDNQFKS 455
Query: 348 QIFISS-QDMTDGGQ 361
QI + D+ +GG+
Sbjct: 456 QISLQDCADLYEGGR 470
>gi|386320424|ref|YP_006016586.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|416111385|ref|ZP_11592598.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|442315223|ref|YP_007356526.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
gi|315022665|gb|EFT35690.1| ATP-dependent DNA helicase RecQ [Riemerella anatipestifer RA-YM]
gi|325334967|gb|ADZ11241.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-GD]
gi|441484146|gb|AGC40832.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-2]
Length = 734
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 191/314 (60%), Gaps = 21/314 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+K +++ D++SG+ +LLYV PE ++ LK+ + ++ VAIDEAHCIS WG
Sbjct: 101 QIK-QVFSDINSGRT--KLLYVAPESLIKEDYLDFLKQAN----ISFVAIDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR L + + + +VP++ALTATA PKVQ D+ ++L + + +V K SFNRPNLFY
Sbjct: 154 HDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMSDAVVFKESFNRPNLFY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K D ++ + N IVYCL R +E + L GI+ YHAGL+
Sbjct: 214 EVRPKV---DVEKEIVKFINKNKGKSGIVYCLSRKKVEEFAQTLQVNGINALPYHAGLDQ 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R + D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 271 KTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L +Y D ++E L++ +S S +E + +++V Y E S RR+
Sbjct: 331 EGHCLAFYDPKDIEKLEKFLAQ------KSVSEKEV----GLQLLNEVVGYAETSMSRRQ 380
Query: 302 KILESFGEQI-PVS 314
IL FGE+ P++
Sbjct: 381 YILYYFGEEFDPIN 394
>gi|407452782|ref|YP_006724507.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
gi|403313766|gb|AFR36607.1| Superfamily II DNA helicase [Riemerella anatipestifer RA-CH-1]
Length = 734
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 188/309 (60%), Gaps = 20/309 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q+K +++ D++SG+ +LLYV PE ++ LK+ + ++ VAIDEAHCIS WG
Sbjct: 101 QIK-QVFSDINSGRT--KLLYVAPESLIKEDYLDFLKQAN----ISFVAIDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR L + + + +VP++ALTATA PKVQ D+ ++L + + +V K SFNRPNLFY
Sbjct: 154 HDFRPEYRNLKGIIDKIANVPVIALTATATPKVQDDIQKTLGMSDAVVFKESFNRPNLFY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K D ++ + N IVYCL R +E + L GI+ YHAGL+
Sbjct: 214 EVRPKV---DVEKEIVKFINKNKGKSGIVYCLSRKKVEEFAQTLQVNGINALPYHAGLDQ 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R + D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 271 KTRVANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L +Y D ++E L++ +S S +E + +++V Y E S RR+
Sbjct: 331 EGHCLAFYDPKDIEKLEKFLAQ------KSVSEKEV----GLQLLNEVVGYAETSMSRRQ 380
Query: 302 KILESFGEQ 310
IL FGE+
Sbjct: 381 YILYYFGEE 389
>gi|367009466|ref|XP_003679234.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
gi|359746891|emb|CCE90023.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
Length = 1364
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 194/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + K+++ G L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 704 LDLIYISPEMISASEQCKRGINKLYNDGKLARIVVDEAHCVSNWGHDFRPDYKELKYFKR 763
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PDVP++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NLFYE+ K ++ ++
Sbjct: 764 EYPDVPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLFYEILKK--TKNSIFEI 821
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C +K + I+YC + +C++ +A + GI CA YHAG+ R ++ W +
Sbjct: 822 CDTIKIRFRNQTGIIYCHSKNSCEQTAAQMQRSGIKCAFYHAGMEPDDRLTIQKAWQADE 881
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 882 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSYCMAYFSFRDVR 941
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ K+++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 942 TIQTMIQKDKNLDRE-------NKEKHLNKLQQVMSYCDNETDCRRKLVLSYFNEDFDSK 994
Query: 315 LCKNSCDACKH 325
LC +CD C++
Sbjct: 995 LCGKNCDNCRN 1005
>gi|399024201|ref|ZP_10726247.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
gi|398081075|gb|EJL71860.1| ATP-dependent DNA helicase RecQ [Chryseobacterium sp. CF314]
Length = 734
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 192/325 (59%), Gaps = 25/325 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++++D+ SGK +LLYV PE ++ LK++ ++ AIDEAHCIS WGHDFR
Sbjct: 104 QVFDDIKSGKT--KLLYVAPESLIKEDYLDFLKEV----TISFFAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L + + + +VP++ALTATA PKVQ D+ ++L + N LV K SFNRPNL+YEVR
Sbjct: 158 PEYRNLKLIIDKIANVPVIALTATATPKVQDDIQKTLGMANALVFKESFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D ++ + + IVYCL R +E + L GI+ YHAGL+ K R
Sbjct: 218 KVNVD---KEIVKFINQHKGKSGIVYCLSRRKVEEFAQLLQVNGINALPYHAGLDQKVRV 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 275 ANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGYC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L +Y D ++E L++ + S RE + +++V Y E S RR+ IL
Sbjct: 335 LAFYDPKDIEKLEKFLAQ------KPVSEREI----GLQLLNEVVGYAETSMSRRQYILY 384
Query: 306 SFGEQI-PVS-----LCKNSCDACK 324
FGE PV+ +C N+ D K
Sbjct: 385 YFGEIFDPVTGEGAKMCDNASDPPK 409
>gi|336365577|gb|EGN93927.1| hypothetical protein SERLA73DRAFT_78305 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378141|gb|EGO19300.1| hypothetical protein SERLADRAFT_443341 [Serpula lacrymans var.
lacrymans S7.9]
Length = 804
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 199/355 (56%), Gaps = 23/355 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K +I +DL SG+P RLLY+TPE T M L ++ R +VA+ +AHCIS WGHD
Sbjct: 133 KQEILDDLLSGQPQNRLLYITPERLFTKDIMRLLTIVYERQR-QVVAL-QAHCISEWGHD 190
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS--SFNRPNLFY 121
FR YRKL + R+ P VPI+ALTATA P VQ+D++ SL + + K+ FNRPNLFY
Sbjct: 191 FRAEYRKLGNFRDRFPGVPIMALTATATPGVQQDIIRSLKMDRNSLFKAVHPFNRPNLFY 250
Query: 122 EVRYKDLLDD--AYADLCSVL-----KANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
EVRY D AD+ + + + IVYC R CDELSAYL G++
Sbjct: 251 EVRYASAPDSLSQMADILEFITSLHRRRERPSSGIVYCRTRVVCDELSAYLRGKGLNSRP 310
Query: 175 YHAGLNDKARSSVLDDWISSRK----QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFY 230
YH G+ K L +W VV AT+AFGMGID+ DVR + HF++PKS E +Y
Sbjct: 311 YHRGIPAKTLDKTLKEWEQGGSGEGVDVVCATIAFGMGIDKSDVRYIIHFDLPKSFEGYY 370
Query: 231 QESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNS--QSFSTRERSSKKSISDFSQ 288
QE+GRAGRD PS+ +LYY +D R+ ++S + ++ + S++SI FS
Sbjct: 371 QETGRAGRDDAPSRCILYYSREDAFRLRRLVSGSHARRQFAADAADGPAPSQRSIDSFSS 430
Query: 289 MVDYCEGSG-CRR-----KKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELT 337
++++ E + CR + +S I + CD CK+P+ + +LT
Sbjct: 431 LINFAENTHICRHVVCFFTSLFKSSARLIISKVNLQMCDVCKYPDKTKRRKQKLT 485
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 190/327 (58%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ ++ L+ ++ R LL IDEAHC+S WGHD
Sbjct: 753 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLITTLENLYERKLLARFVIDEAHCVSQWGHD 812
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + +P V SFNR NL Y V
Sbjct: 813 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILSPQVFSMSFNRHNLKYYV 872
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 873 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 932
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R +V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 933 RDAVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 992
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 993 SHCLLFYTYHDVTRLKRLILMEKDGNHHTKETH-------FNNLYSMVHYCENIAECRRI 1045
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1046 QLLAYFGEHGFNPDFCKKYPDVSCDNC 1072
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/351 (38%), Positives = 201/351 (57%), Gaps = 14/351 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L+S +LLYVTPE A + + L +H R LL + IDEAHC+S WGH
Sbjct: 489 QQEILRELNSDYCKYKLLYVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGH 548
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P+ P+LALTATA V++DV+++L L N ++ + SFNRPNL+Y
Sbjct: 549 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYS 608
Query: 123 VRYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K D+ ++ N D C I+YCL R C++++ L G CA YH ++
Sbjct: 609 VVPK--TKKCLEDIDKFIRVNHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDP 666
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+SV W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 667 AQRASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 726
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--------KKSISDFSQMVDYC 293
S +LYY D R++ +LS+ + S S RS+ + + + +MV YC
Sbjct: 727 RSSCILYYNYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYC 786
Query: 294 EGS-GCRRKKILESFGEQIPVSLCKNSCDAC-KHPNLLAKYLGELTSAVLQ 342
E CRR L FGE+ S C+ +CD C K + + K + E+ + +++
Sbjct: 787 ENDVDCRRLLQLAHFGEKFNSSTCQKTCDNCLKITSFIEKDVTEIANQLVE 837
>gi|6567200|dbj|BAA88312.1| DNA helicase RECQE [Drosophila melanogaster]
Length = 1058
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKADKAL 441
>gi|383450034|ref|YP_005356755.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
gi|380501656|emb|CCG52698.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
Length = 731
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 184/306 (60%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE ++ L ++ L+ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKADIVSGKT--KLLYVAPESLTKEEYIQFLNEVK----LSFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L DVPI+ LTATA PKVQ+D++++L + + V K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLRNIIRQLGDVPIIGLTATATPKVQEDILKNLDMPDANVFKASFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + AD+ +K + ++YCL R +E++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNVEADIIRFIKQHKGKSGVIYCLSRKKVEEIAQVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ +VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ ++ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDIEKLEKFMAGKPVAEQEIGYAL-----------LQEVVAYAETSMSRRKYLL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|374385551|ref|ZP_09643054.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
gi|373225253|gb|EHP47587.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
Length = 735
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 183/321 (57%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ ED+ GK +LLYV PE + LKKI ++ A+DEAHCIS WGHDFR
Sbjct: 114 KVKEDILEGKT--KLLYVAPESLTKDSNVEFLKKIK----ISFFAVDEAHCISEWGHDFR 167
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
YRK+ + + PI+ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 168 TEYRKIRPIVEQIGKAPIIALTATATPKVQHDIQKNLDMLDAEVFKSSFNRPNLYYEVRP 227
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ D D+ +K + I+YCL R +EL+ L GI A YHAG++ RS
Sbjct: 228 KN---DPTKDIIKFIKKHEGKSGIIYCLSRKKVEELAEVLCINGIKAAPYHAGMDATTRS 284
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 285 ANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 344
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ YY D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 345 ITYYSYKDIQKLE--------KFMQGKPIAEQEIGKQL--LMETVSYAETSLCRRKVLLH 394
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C CD C +P
Sbjct: 395 YFGEDFDEDNC-GCCDNCLYP 414
>gi|354548256|emb|CCE44993.1| hypothetical protein CPAR2_407960 [Candida parapsilosis]
Length = 1080
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 191/314 (60%), Gaps = 14/314 (4%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE + K+ +++ R L V IDEAHC+SSWGHDFRP Y+ + +
Sbjct: 659 LDIVYLSPEKANKSTMIQKIIGRLYERNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKE 718
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK--DLLDDAYA 134
P VPI+ALTATA KV+ D++ L + +P+ LK SFNR NL+YE+R+K + L+
Sbjct: 719 RFPAVPIMALTATANEKVRMDIVHHLKMDSPVYLKQSFNRTNLYYEIRWKSGNYLESMKD 778
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ S K + C I+YC + +C++ SA L++ G+ + YHAG++ + R + +W +
Sbjct: 779 YILSRYK---NKCGIIYCHSKQSCEQTSAKLNSFGLKTSFYHAGMSPEDRFKIQTNWQKN 835
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ Q++ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD PS+ ++YY D
Sbjct: 836 KIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDA 895
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
R ++ ++ ++ E + ++ Q+V YCE + CRRK++L F E
Sbjct: 896 RSLQNMIHRDA-------DLTEEGKENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFDP 948
Query: 314 SLCKNSCDACKHPN 327
CK CD CK+ N
Sbjct: 949 INCKKQCDNCKNYN 962
>gi|294495880|ref|YP_003542373.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
gi|292666879|gb|ADE36728.1| ATP-dependent DNA helicase RecQ [Methanohalophilus mahii DSM 5219]
Length = 599
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 195/322 (60%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+ + + L GK L LLYV PE A P + L K++ +NL A+DEAHCIS WGHDF
Sbjct: 93 SHVKDSLIRGK--LDLLYVAPERLAMPSTLKLLAKVN----VNLFAVDEAHCISQWGHDF 146
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YRKL +LR+ P+VP++ALTATA P V +D+ + L + +SFNR NL+YEV+
Sbjct: 147 RPEYRKLGALRSGFPNVPLIALTATATPAVARDITKQLNMVRSEKYVASFNRSNLYYEVK 206
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
+ +A + S L+++ ++C I+YC R + + L+ L G++ A YHAG++D+ R
Sbjct: 207 SGE---NADQQITSYLRSHPESCGIIYCQTRKSVEGLAGRLKKLGVNAAFYHAGMSDELR 263
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ ++ +VVVATVAFGMGID+ +VR V H+++P +E++YQ++GR GRD P
Sbjct: 264 HRAQEKFLDGTIRVVVATVAFGMGIDKSNVRFVMHYDLPADLESYYQQTGRGGRDGQPCD 323
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+L++ D + ++ + + SK + ++S M+DYCE CRRK +L
Sbjct: 324 CILFFKRGDWYKQQYFIEQMSSKKEREI---------ALSKLRHMMDYCESVTCRRKILL 374
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
E FGE S C + CD C +P
Sbjct: 375 EYFGESAE-SDC-DYCDVCLNP 394
>gi|405951075|gb|EKC19019.1| ATP-dependent DNA helicase Q5 [Crassostrea gigas]
Length = 1138
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 195/339 (57%), Gaps = 21/339 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ K+ EDL+ KP +LLY+TPE A+ G + ++ + R +L +DEAHC+S WGHD
Sbjct: 98 RAKVVEDLNRAKPKTKLLYITPEQAASEGCRTLIEGLVKRQMLTYFVVDEAHCVSQWGHD 157
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL S R +P+VP +ALTATA + +D+++ L L+N L K+S R N++Y+
Sbjct: 158 FRPDYLKLGSFRKIMPNVPCVALTATATAQTVEDIVQQLKLKNQLTKFKTSCFRSNIYYD 217
Query: 123 VRYKDLLDDAYADLCSV-LKANGDT-----------------CAIVYCLERTTCDELSAY 164
+ KD++ D Y DL L + G C IVYC R C E++++
Sbjct: 218 IVMKDVVHDPYEDLMKFGLTSLGREMFTKEDNSLIENWSEFGCGIVYCRTRDACAEVASH 277
Query: 165 LSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPK 224
L+ GI YHAGL R +V DW+ R V+ AT++FGMG+D+ +VR V H+ IPK
Sbjct: 278 LTRKGILTKPYHAGLKADVRETVQSDWMEGRFPVIAATISFGMGVDKPNVRFVAHWTIPK 337
Query: 225 SMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSIS 284
SM +YQESGRAGRD S LYY + + F+++K SK +++ ++ K + S
Sbjct: 338 SMSGYYQESGRAGRDGAQSFCRLYYSKREMDTVAFLINKENSKFTKNTEAQKIRKKAAES 397
Query: 285 DFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDAC 323
F +V YCE CR I + FG++ P C SCD C
Sbjct: 398 GFDAIVKYCENLSCRHWSIAKYFGDEKPE--CNKSCDCC 434
>gi|339239889|ref|XP_003375870.1| ATP-dependent DNA helicase RecQ [Trichinella spiralis]
gi|316975445|gb|EFV58885.1| ATP-dependent DNA helicase RecQ [Trichinella spiralis]
Length = 440
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 184/317 (58%), Gaps = 20/317 (6%)
Query: 16 PSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
P+ +LLY+TPE T S L +H R LLN VA+DEAHC+S WGHDFRP Y L +LR
Sbjct: 86 PNTKLLYITPEQAETATCRSVLDSLHQRQLLNYVAVDEAHCVSQWGHDFRPKYLNLGALR 145
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYEVRYKDLLDDA-- 132
DVP +ALTATA KV D++ L L+ P+ K RPNLFY+V++KD + D
Sbjct: 146 QRYDDVPWIALTATATGKVVGDILRLLKLKPPVAEFKHPCYRPNLFYDVQFKDTIADGEK 205
Query: 133 -YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
AD + IVYC R C+ +A +S GI CAAYHAGL++K R V +DW
Sbjct: 206 HVADFLKQIFTEQGGSGIVYCRTRERCESFAADISGYGIRCAAYHAGLSNKVREKVYNDW 265
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
+ + V+VAT++FGMG+D+ DVR V H+++PK++ +YQESGRAGRD S +YY
Sbjct: 266 MVGKVHVIVATISFGMGVDKSDVRCVVHWDLPKTLTGYYQESGRAGRDGNRSYCRIYYCR 325
Query: 252 DDRRRMEFILSKN--QSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
++RR E+ ++ K S+ FS + K +F ++V +CE FG
Sbjct: 326 EERRVGEYFTKQSILNKKMSKDFSPHAEKAMK--MEFEEIVSFCE----------TYFGG 373
Query: 310 QIPVSLCKNSCDACKHP 326
+ C ++CD C P
Sbjct: 374 TL--DRCGDNCDFCTDP 388
>gi|356531519|ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
Length = 695
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 188/323 (58%), Gaps = 24/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G+ L++LYVTPE ++ + FMSKL+K H G L+L++IDEAHC S WGHDFR
Sbjct: 169 IYKTLEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFR 228
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ P VPI+ALTATA +VQ D++E L + + S+ NRPNLFY V+
Sbjct: 229 PDYKSLSILKTQFPRVPIVALTATATQRVQNDLIEMLHIPRCVKFVSTVNRPNLFYMVKE 288
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 289 KSSVGKVVIDEIAEFIQESYPNNES-GIVYCFSRKECEQVAKELRERGISADYYHADMDV 347
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W +++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 348 NAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 407
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRR 300
PS+ LLY+ D R S E S +++ D +V YC CRR
Sbjct: 408 PSECLLYFRPGDAPR------------QSSMVFYENSGLQNLYD---IVRYCLSKRQCRR 452
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
F E P+ C CD C
Sbjct: 453 SAFFHHFAE--PLQECNGMCDIC 473
>gi|363580854|ref|ZP_09313664.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium HQM9]
Length = 702
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 188/309 (60%), Gaps = 23/309 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE +S+L+ I ++ L+L+AIDEAHCIS+WGHDFRP+Y +L L+N
Sbjct: 112 IKLLYVAPE------SLSQLEGILNQTTLSLIAIDEAHCISAWGHDFRPAYTQLGFLKNR 165
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P PI+ALTATA ++D+ + L L +P + SSF+RPNL VR D +
Sbjct: 166 FPHTPIIALTATADKATREDISKQLNLNHPTLHLSSFDRPNLSLSVRPGI---DRVKKIL 222
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + + I+YCL R T + L+ L + G AYHAGL R V +++I+ + Q
Sbjct: 223 EFVDDHPNDSGIIYCLSRKTTENLAEKLDSAGFKAKAYHAGLGHHVREQVQNEFINDQLQ 282
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
+V ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD +PS+++L++ D ++
Sbjct: 283 IVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGVPSETILFHSYADVVQL 342
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
Q F+T+ +++ ++ +M Y + CRRK +L FGE +P C
Sbjct: 343 ------------QQFATKSGNTEVQLAKLDRMQQYADALSCRRKVLLSYFGE-LPEKDCG 389
Query: 318 NSCDACKHP 326
N CD CKHP
Sbjct: 390 N-CDVCKHP 397
>gi|156848959|ref|XP_001647360.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156118046|gb|EDO19502.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 1332
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 195/311 (62%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE+ +A+ +KK++ L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 653 LDIIYISPEMVSASEQCKKAIKKLYVDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKR 712
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA +V D+ +L L++P+ LK SFNR NLFYE+R K+ ++ ++
Sbjct: 713 EYPDIPLMALTATANERVILDINHNLSLKDPVFLKQSFNRTNLFYEIRIKN--KNSIFEM 770
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
C+ +K + I+YC + +C++ ++ + G+ C YHAG+ + R V W +
Sbjct: 771 CNDIKTRFRNQTGIIYCHSKNSCEQTASLIERSGVKCTYYHAGMEPEDRMKVQQAWQEDK 830
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 831 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFKDIR 890
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ K+Q+ + + + +K ++ Q++ YC+ + CRRK +L F E+ +
Sbjct: 891 SIQTMIQKDQNLDRE-------NKEKHLNKLKQVISYCDNIADCRRKLVLSYFNEKFDEA 943
Query: 315 LCKNSCDACKH 325
C+ +CD CK+
Sbjct: 944 KCQKNCDNCKN 954
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 185/309 (59%), Gaps = 13/309 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+RLLYVTPEL + F LK ++ + IDEAHC+S WGHDFRP Y++LS L+
Sbjct: 369 IRLLYVTPELLNNSDRFKGILKSLYCENKVCRFVIDEAHCVSQWGHDFRPDYKELSKLKQ 428
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA KV+ D++ L +QN + KSSFNRPNL Y V K D+
Sbjct: 429 SYPTVPIIALTATATKKVEVDIINVLNIQNCKIFKSSFNRPNLIYRVLPKTAT--TILDI 486
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S + ++ D+ I+YC + C++++ LS + YH GL+ R + + W +
Sbjct: 487 VSFINSHYADSPGIIYCTSKKECEKMAEELSR-DLKITYYHGGLSKYDRIRIQEQWNNKT 545
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+++ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L S +LYY D +
Sbjct: 546 YNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGLESICILYYSYADTK 605
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
+ F++++ S++T ++ + +V YCE CRRK++L+ F E+
Sbjct: 606 VINFLITR-------SYNTTAEQKQRQKEELFNVVKYCENKVECRRKQVLKYFNEEFSSD 658
Query: 315 LCKNSCDAC 323
+C +CD C
Sbjct: 659 MCNKTCDNC 667
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 737 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 796
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 797 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYV 856
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D
Sbjct: 857 LPKKPKKVAFDCLEWIRKYHPYDSGIIYCLSRRECDTMAGTLRKDGLAALAYHAGLSDSE 916
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ ATVAFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 917 RDEVQHKWINQDGCQVICATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEM 976
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 977 SHCLLFYTYHDVTRLKRLIMMEKDGNHHTKETH-------FNNLYSMVHYCENITECRRI 1029
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1030 QLLAYFGENGFNPDFCKKYPDVSCDNC 1056
>gi|393785533|ref|ZP_10373683.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392662288|gb|EIY55852.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 726
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 215/384 (55%), Gaps = 33/384 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKADILAGKT--KLLYVAPESLTKEENVEFLRSVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPLIALTATATPKVQHDIQKNLGMVDAQIFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ ++ N + I+YCL R +EL+ L A GI+ AYHAG++ R+
Sbjct: 217 KTANIDR--DIIKFIRNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 QNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGRC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYTNKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAESSVCRRKTLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL AV++ K +F +I D+ G
Sbjct: 385 YFGEEYLEDNCGN-CDNCLNPKKQVE-AQELLCAVIEAIIAVKENFKADYII--DILQGR 440
Query: 361 QYSEF---WNRDDEASGS---EED 378
+ SE + D E GS EED
Sbjct: 441 ETSEVQAHLHEDLEVFGSGMGEED 464
>gi|119943986|ref|YP_941666.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
gi|119862590|gb|ABM02067.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
Length = 602
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 24/327 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q + ++ D+ SG+ L+L+Y+ PE P F+S+L + +NL AIDEAHCIS WG
Sbjct: 98 QQQNQVLNDMHSGQ--LKLVYMAPERLLRPDFLSRLDNLP----INLFAIDEAHCISQWG 151
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP Y L L+ PD+P++ALTATA Q+D++ L +PL+ SF+RPN+ Y
Sbjct: 152 HDFRPEYALLGQLKQRFPDIPLVALTATADYATQQDILARLQFNDPLIAIHSFDRPNIEY 211
Query: 122 EV--RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
+ +Y+ L L + L + + I+YC R +EL+ L G+S YHAG+
Sbjct: 212 LLIEKYRPL-----NQLANYLDEHKNESGIIYCTSRRRTEELAEKLRVKGLSVRCYHAGM 266
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R SV D +I + +VVATVAFGMGID+ +VR V H+ IPK++E++YQE+GRAGRD
Sbjct: 267 MIEERQSVQDLFIKDKVDIVVATVAFGMGIDKPNVRFVVHYEIPKNIESYYQETGRAGRD 326
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCR 299
LP++++L+Y D R+ +L KN T E+ + + + MV + E CR
Sbjct: 327 GLPAQAMLFYDPADAGRVRSMLEKN---------TNEQQQRIELHKLNTMVAFAEAQTCR 377
Query: 300 RKKILESFGEQIPVSLCKNSCDACKHP 326
R+ +L FGE S C N CD C P
Sbjct: 378 RQVLLNYFGEYSHKS-CGN-CDVCLDP 402
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 133/329 (40%), Positives = 195/329 (59%), Gaps = 11/329 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ KI+++L+S +LLYVTPE A + + L+ ++SRGLL IDEAHC+S WGH
Sbjct: 203 QLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGH 262
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y
Sbjct: 263 DFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYS 322
Query: 123 VRYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K D+ +K N D C I+YCL R C+++S L G A YH +
Sbjct: 323 VVPKT--KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEP 380
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ + W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 381 EQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQ 440
Query: 242 PSKSLLYYGMDDRRRMEFILSK---NQSKNSQSF---STRERSSKKSISDFSQMVDYCEG 295
S +LYYG D R++ ++S+ +QS + + ++ R + + + +MV YCE
Sbjct: 441 RSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCEN 500
Query: 296 S-GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L GE+ + CK +CD C
Sbjct: 501 EVECRRFLQLVHLGEKFDSTNCKKTCDNC 529
>gi|24664230|ref|NP_524070.2| homolog of RecQ, isoform A [Drosophila melanogaster]
gi|23093484|gb|AAF49724.2| homolog of RecQ, isoform A [Drosophila melanogaster]
Length = 470
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 19/369 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
++CE + CR K + FG+ P C CD CK P K L E+ + + F
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL-EIFHRLCMDDAFKS- 455
Query: 350 FISSQDMTD 358
IS QD D
Sbjct: 456 HISLQDCAD 464
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 204/329 (62%), Gaps = 14/329 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++K++ L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 659 LDLVYISPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKV 718
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P+LALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV KD ++ D+
Sbjct: 719 EYPDIPMLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKD--KNSLKDI 776
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+K G T I+YC + +C++ +A + G+ CA YHAG+ R ++ W S
Sbjct: 777 SHSIKTRFKGQT-GIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSD 835
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ QV+ ATVAFGMGID+ DVR V H+ +P+++E +YQE+GRAGRD S ++YY D
Sbjct: 836 KIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDV 895
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ K+++ + + + +K ++ Q++ YCE + CRR+ +L F EQ
Sbjct: 896 RNIQSMIQKDKNLDRE-------NKEKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSS 948
Query: 314 SLCKNSCDACKHPNLLAKYLGELTSAVLQ 342
C +CD C++ + + ++T LQ
Sbjct: 949 QECSKNCDNCQNGSNVEYEERDVTDEALQ 977
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 204/329 (62%), Gaps = 14/329 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ + ++K++ L + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 659 LDLVYISPEMVSASVQCRNAIQKLYRDKKLARIVVDEAHCVSNWGHDFRPDYKELKFFKV 718
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P+LALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+YEV KD ++ D+
Sbjct: 719 EYPDIPMLALTATASEQVRMDIIHNLHLKEPVFLKQSFNRSNLYYEVLRKD--KNSLKDI 776
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+K G T I+YC + +C++ +A + G+ CA YHAG+ R ++ W S
Sbjct: 777 SHSIKTRFKGQT-GIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQQQWQSD 835
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ QV+ ATVAFGMGID+ DVR V H+ +P+++E +YQE+GRAGRD S ++YY D
Sbjct: 836 KIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMYYSFRDV 895
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ K+++ + + + +K ++ Q++ YCE + CRR+ +L F EQ
Sbjct: 896 RNIQSMIQKDKNLDRE-------NKEKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSS 948
Query: 314 SLCKNSCDACKHPNLLAKYLGELTSAVLQ 342
C +CD C++ + + ++T LQ
Sbjct: 949 QECSKNCDNCQNGSNVEYEERDVTDEALQ 977
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 250 bits (638), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 191/324 (58%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 600 IYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 659
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V
Sbjct: 660 PDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLP 719
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + D+ +++ I+YCL R CDE S + GI +YHAGL D R
Sbjct: 720 KKGVS-TLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDGIRAVSYHAGLTDTER 778
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DW++ + +V+ ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 779 ESRQKDWLTGKIRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDMAD 838
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D R++ +L ++ + + K + + ++V YCE + CRR +
Sbjct: 839 CILYYNYSDMLRIKKMLDSDK-------ALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQ 891
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L+ FGE C + +CD C
Sbjct: 892 LDYFGEHFTSEQCLENRETACDNC 915
>gi|5410429|gb|AAD43053.1|AF134239_3 Recq helicase 5 [Drosophila melanogaster]
Length = 470
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 19/369 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
++CE + CR K + FG+ P C CD CK P K L E+ + + F
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL-EMFHRLCMDDAFKS- 455
Query: 350 FISSQDMTD 358
IS QD D
Sbjct: 456 HISLQDCAD 464
>gi|340351994|ref|ZP_08674884.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
gi|339615729|gb|EGQ20399.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
Length = 727
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 183/319 (57%), Gaps = 21/319 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ +GK +LLYV PE + K + ++ AIDEAHCIS WGHDFRP YR
Sbjct: 107 DILNGKT--KLLYVAPESLNKEESIEFFKTVK----VSFYAIDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + + PI+ALTATA KV+ D+++SL +++ KSSFNRPNL+YEVR K
Sbjct: 161 KIRQAVDLIGKAPIIALTATATDKVRTDIVKSLGIEDCAEFKSSFNRPNLYYEVRSKKNE 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+D + +K N I+YCL R +EL+A L A I YHAGL+ + RS D
Sbjct: 221 EDTNRQIIKFIKQNPGKSGIIYCLSRKKVEELAAVLQANDIKAEPYHAGLDSETRSRTQD 280
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
D++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + +++Y
Sbjct: 281 DFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGQCIVFY 340
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESF 307
SKN K ++F + +++ I + Y E S CRRK +L F
Sbjct: 341 ------------SKNDLKKLENFMDGKPVAEQDIGRQLLQETETYAESSVCRRKLLLHYF 388
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE P C CD C HP
Sbjct: 389 GEDYPKDNC-GMCDNCLHP 406
>gi|154150635|ref|YP_001404253.1| ATP-dependent DNA helicase RecQ [Methanoregula boonei 6A8]
gi|153999187|gb|ABS55610.1| ATP-dependent DNA helicase, RecQ family [Methanoregula boonei 6A8]
Length = 451
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/320 (43%), Positives = 188/320 (58%), Gaps = 18/320 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+++I + G+ LR+L+V+PE PGF+ L++ R LVAIDEAHCIS WGHD
Sbjct: 110 RSRIEAAMRDGR--LRILFVSPEKCLQPGFLEFLQEFPVR----LVAIDEAHCISEWGHD 163
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L+ LR P P++ALTATA P+V+KD+ L L P SF R NL Y V
Sbjct: 164 FRPEYRDLARLRKCFPSAPVIALTATAVPEVRKDISRQLGLVKPQSFVGSFCRENLEYRV 223
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K AD+C K + IVYCL + +E +A L G + AYHAGL+
Sbjct: 224 IKKKNPLVQLADICCRHK---NESGIVYCLSKKETEECAADLKKRGFTALAYHAGLSRPV 280
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R +V D ++ + ++V ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD P+
Sbjct: 281 REAVQDAFLKNTSRIVCATVAFGMGIDKPDVRFVVHYDLPKSVEGYYQETGRAGRDGKPA 340
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ +L Y D R+ ++L + + S R ++K + D M YCE GCRR +
Sbjct: 341 ECVLLYSRGDAVRIRYMLDHDGAGEQAS-----RIAQKKLRD---MTGYCETIGCRRNFL 392
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGEQ C SCDAC
Sbjct: 393 LAYFGEQPARKNC-GSCDAC 411
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
Length = 1394
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 205/328 (62%), Gaps = 14/328 (4%)
Query: 18 LRLLYVTPELT-ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ A+ + ++K++ L+ + +DEAHC+S+WGHDFRP Y++L +
Sbjct: 725 LDLVYISPEMICASVQCKNAIQKLYRDHKLSRIVVDEAHCVSNWGHDFRPDYKELKFFKE 784
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA+ +V+ D++ +L L+ P+ LK SFNR NL+Y+V K ++ ++
Sbjct: 785 EYPNIPMMALTATASEQVRMDIIHNLQLRQPVFLKQSFNRTNLYYQVLRKS--KNSMDEI 842
Query: 137 CSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
C +K G T IVYC + +C++ +A + G+ CA YHAG++ R V W S+
Sbjct: 843 CETIKTKFRGQT-GIVYCHSKNSCEQTAATMVRSGVKCAYYHAGMDPDERLQVQQGWQSN 901
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S ++YY D
Sbjct: 902 KVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGSYSHCIMYYSFRDV 961
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ K+++ + + + +K ++ Q++ YCE + CRR+ +L F E
Sbjct: 962 RTIQSMIQKDKNLDRE-------NKEKHLNKLQQVMQYCENTTDCRRQLVLSYFNESFNS 1014
Query: 314 SLCKNSCDACKHPNLLAKYLGELTSAVL 341
S C +CD C++ + + ++TS L
Sbjct: 1015 SDCTKNCDNCRNGHNIEYEDRDVTSEAL 1042
>gi|62472181|ref|NP_001014584.1| homolog of RecQ, isoform C [Drosophila melanogaster]
gi|61678462|gb|AAX52745.1| homolog of RecQ, isoform C [Drosophila melanogaster]
Length = 468
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 19/369 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
++CE + CR K + FG+ P C CD CK P K L E+ + + F
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL-EIFHRLCMDDAFKS- 455
Query: 350 FISSQDMTD 358
IS QD D
Sbjct: 456 HISLQDCAD 464
>gi|194870876|ref|XP_001972738.1| GG13718 [Drosophila erecta]
gi|190654521|gb|EDV51764.1| GG13718 [Drosophila erecta]
Length = 1068
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 208/373 (55%), Gaps = 18/373 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVKTNLKFLYITPEQAATKFFQELLQTLHKHKKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYTDVIWLALTATASSEVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVLKA-NGDT------------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L + GD C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGDPKEFKEAPKSQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
+ AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 VGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
++CE + CR K + FG+ P C CD CK P K L + S I
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PPPDCNGQCDVCKRPKKAEKTLEMFHRLCMDDTFKSHI 457
Query: 350 FISS-QDMTDGGQ 361
+ D+ +GG+
Sbjct: 458 SLQDCADLYEGGR 470
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 200/328 (60%), Gaps = 18/328 (5%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 59
+Q + ++++ L+SG L L+Y++PE+ +A+ S LK++H G L + +DEAHC+SS
Sbjct: 623 VQERRQMFDLLNSG--DLDLIYLSPEMISASNQARSSLKRLHRIGKLARIVVDEAHCVSS 680
Query: 60 WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNL 119
WGHDFRP Y+ L+ + PD+P++ALTATA V D++ +L L P K SFNR NL
Sbjct: 681 WGHDFRPDYKTLNYFKKEYPDIPVMALTATANEHVVMDIVHNLGLNKPQCFKQSFNRTNL 740
Query: 120 FYEVRYKDLLDDAYADLCSVLKANG---DTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
FY+V+ K + D + + NG + I+YC + +C++ SA L GI C+ YH
Sbjct: 741 FYKVQVKT---KTHLDEITNM-INGQYRNQTGIIYCHSKNSCEQTSARLIQNGIKCSFYH 796
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AG+ + R +V W S + +V+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRA
Sbjct: 797 AGMTTEDRFAVQSAWQSDKIRVICATIAFGMGIDKPDVRFVIHLTVPRTLEGYYQETGRA 856
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-G 295
GRD S +++Y D R ++ ++ K+ TRE + + ++ +++ YCE G
Sbjct: 857 GRDGNHSDCIMFYSYRDVRTLQTMIQKDVD------LTRE-NKENHLNKLRKVIQYCENG 909
Query: 296 SGCRRKKILESFGEQIPVSLCKNSCDAC 323
+ CRR+++L+ F E C+ CD C
Sbjct: 910 TDCRRQQVLQYFNENFDKKDCQKQCDNC 937
>gi|5410428|gb|AAD43052.1|AF134239_2 Recq helicase 5 [Drosophila melanogaster]
Length = 468
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 208/369 (56%), Gaps = 19/369 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L+ +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLQTLHKHNKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGNPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
++CE + CR K + FG+ P C CD CK P K L E+ + + F
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PTPDCSGQCDVCKRPKKAEKAL-EMFHRLCMDDAFKS- 455
Query: 350 FISSQDMTD 358
IS QD D
Sbjct: 456 HISLQDCAD 464
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 188/325 (57%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 733 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 792
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 793 QDYKRMNMLRQKFPSVPMMALTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYSVLP 852
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ +YHAGL+D AR
Sbjct: 853 KKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALSYHAGLSDSARD 912
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 913 EVQHKWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGEMSH 972
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D R++ ++ + NS + T ++ MV YCE CRR ++
Sbjct: 973 CLLFYNYHDVTRLKRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENIIECRRIQL 1025
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE + CK +CD C
Sbjct: 1026 LSYFGENGFNPNFCKEYPDVTCDNC 1050
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 204/352 (57%), Gaps = 18/352 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I+ DL S +LLYVTPE A + L+ +++R LL + IDEAHC+S WGH
Sbjct: 596 QQEIFRDLSSDCSKYKLLYVTPEKVAKSDVLLRHLESLNARHLLARIVIDEAHCVSQWGH 655
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P +P+LALTATA V++DV+++L L N ++ + SFNRPNL+Y
Sbjct: 656 DFRPDYQGLGILKQKFPKIPVLALTATATASVKEDVVQALGLINCIIFRQSFNRPNLWYS 715
Query: 123 V--RYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V + K +DD + +K N D C IVYCL R C++++ L G A YH +
Sbjct: 716 VIPKTKKCVDD----IDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSM 771
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ RS + W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 772 DPAQRSFIQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRD 831
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--------KKSISDFSQMVD 291
L S +LYY D R++ ++S+ ++ S S R++ + + + +MV
Sbjct: 832 GLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVS 891
Query: 292 YCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC-KHPNLLAKYLGELTSAVL 341
YCE CRR L FGE+ CK +CD C K NL+ K + +++ ++
Sbjct: 892 YCENDVDCRRLLQLVHFGEKFDPGNCKKTCDNCLKSTNLIEKDVTDISKQLV 943
>gi|67924781|ref|ZP_00518182.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|416405865|ref|ZP_11687987.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
gi|67853376|gb|EAM48734.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[Crocosphaera watsonii WH 8501]
gi|357261215|gb|EHJ10512.1| ATP-dependent DNA helicase RecQ [Crocosphaera watsonii WH 0003]
Length = 710
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 194/309 (62%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE F++ L ++ + L+ AIDEAHC+S+WGHDFRP YR+L LR
Sbjct: 111 IKLLYVAPERLLNDSFLNFLDFLNQKIGLSSFAIDEAHCVSAWGHDFRPEYRQLKQLRFR 170
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA +V++D++E L L+ P V +SF+RPNL+YEV+ K +YA L
Sbjct: 171 YPTVPVVALTATATKRVREDIIEQLGLEKPSVHLASFDRPNLYYEVQQKS--RRSYAQLL 228
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ +++ + IVYCL R + ++ L GI YHAG+ D R++ +I +
Sbjct: 229 NYIRSQ-EGSGIVYCLSRKNVETVAFRLQQDGIEALPYHAGMYDDERATNQTRFIRDDVR 287
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGI++ DVR V H+++P+++E++YQESGRAGRD P+ L+ D +++
Sbjct: 288 IIVATVAFGMGINKPDVRFVVHYDLPRNLESYYQESGRAGRDGEPANCALFLSFGDLKKI 347
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++ + S Q + ++ ++VDY E + CRR IL FG+Q + C+
Sbjct: 348 DYLIDQKSSPKEQKIARQQ---------LRKVVDYAEANECRRTIILRYFGQQHNGN-CE 397
Query: 318 NSCDACKHP 326
N CD CK+P
Sbjct: 398 N-CDNCKNP 405
>gi|195590258|ref|XP_002084863.1| GD12613 [Drosophila simulans]
gi|194196872|gb|EDX10448.1| GD12613 [Drosophila simulans]
Length = 1009
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 197/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L +H L A+DEAHC+S WGHD
Sbjct: 51 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLHTLHKHKKLAYFAVDEAHCVSQWGHD 110
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 111 FRPDYLKLGELRSTYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 170
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 171 IVYKNSIEDDFQHLADFARHCLGDPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 230
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 231 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 290
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 291 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 349
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 350 TEFCERTTCRHKLFSDFFGD--PTPDCNGQCDVCKRPKKAEKAL 391
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 19/326 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L +++ ++ IDEAHC+S WGHDFR
Sbjct: 671 IYRDLESHPPMVKLLYVTPEKISSSARFQDILDTLNANNYISRFVIDEAHCVSQWGHDFR 730
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y+V
Sbjct: 731 PDYKKLGILKKRFPNVPTIALTATATPRVRLDILSQLNLKNCKWFLSSFNRSNLRYKVLP 790
Query: 126 K---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K +DD A + ++ I+YCL R CDE++ + G+ AYHAGL D
Sbjct: 791 KKGASTIDDMSA---YIRTKPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTDS 847
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R DW++++ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 848 EREGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEV 907
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +LYY D R++ ++ ++ + + K I + ++V YCE + CRR
Sbjct: 908 ADCILYYNYSDMLRLKKMMDGDK-------ALQYNVKKMHIDNLYRIVGYCENITDCRRA 960
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C +CD C
Sbjct: 961 QQLDYFGEHFTSEQCLENRATACDNC 986
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 759 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYQRTLLARFVIDEAHCVSQWGHD 818
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 819 FRQDYKRMNMLRQKFPLVPVMALTATANPRVQKDILTQLKILKPQVFSMSFNRHNLKYYV 878
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 879 LPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMAETLKKNGLAALAYHAGLSDCA 938
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ ATVAFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 939 RDEVQHKWINQDGCQVICATVAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 998
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 999 SHCLLFYTYHDVTRLKRLILTEKDGNQHTKETH-------FNNLYSMVHYCENITECRRI 1051
Query: 302 KILESFGEQ-IPVSLCKN----SCD-ACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQD 355
++L FGE CK SCD CK + + ++T V F Q + SSQ
Sbjct: 1052 QLLAYFGENGFNPYFCKKYPEVSCDNCCKTKDFKTR---DVTDDVKNIVRFVQEYNSSQG 1108
Query: 356 MTD 358
M +
Sbjct: 1109 MKN 1111
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 188/332 (56%), Gaps = 32/332 (9%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I ++L KPS +LLYVTPE + P F+ LK +H +G L +DEAHC+S WGHDFR
Sbjct: 269 ILQELRHDKPSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFR 328
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L L+ P VP++ALTATA V++D++++L + LVL++SF+RPNL YEV
Sbjct: 329 PDYKRLGCLKQNFPVVPVMALTATATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIG 388
Query: 126 K---------DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAY 175
K DLL D + + C IVYCL + C E+S +L+ I Y
Sbjct: 389 KTKESLKQLGDLLRDRFK----------NQCGIVYCLSKNECVEVSKFLNEKCKIKAVYY 438
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL + R V W + +V AT+AFGMGID+ DVR V H + KS+E++YQESGR
Sbjct: 439 HAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGR 498
Query: 236 AGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE- 294
AGRD P+ + Y D R+ +L Q +SF K +++ +M YCE
Sbjct: 499 AGRDSHPATCIALYQKKDFSRVVCMLRSGQGYKRESF-------KPAMAQAQKMKSYCEL 551
Query: 295 GSGCRRKKILESFGEQIPVSLCK---NSCDAC 323
CRR+ +LE FGE CK N CD C
Sbjct: 552 KVECRRQVLLEHFGESFDQKACKFGSNPCDNC 583
>gi|320167845|gb|EFW44744.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1784
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 129/326 (39%), Positives = 196/326 (60%), Gaps = 17/326 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++++Y +L +++Y+TPE ++ + +S+L ++ L IDEAHC+S WGH
Sbjct: 915 QSRVYLELSRQDERCKVVYMTPEKISHSTRLLSQLDMLYQSKRLARFVIDEAHCVSQWGH 974
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y++L L + P VP++ALTATA +V+ D+M+ L + + SFNR NL Y+
Sbjct: 975 DFRPDYKQLRMLHDRFPTVPVMALTATATERVRSDIMKQLNIHQAEIFVQSFNRENLRYQ 1034
Query: 123 VRYKD--LLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V KD LDD + ++K IVYCL R C+ ++ L GI+ YHAG+
Sbjct: 1035 VYKKDKTTLDD----IARMIKKQWPKDSGIVYCLSRKDCETVARELVQRGIAATFYHAGM 1090
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R+ V DWI +RKQV+VAT+AFGMGI++ DVR V H+++PKS+E +YQESGRAGRD
Sbjct: 1091 DPGDRAVVQRDWIGNRKQVIVATIAFGMGINKPDVRYVFHYSLPKSLEGYYQESGRAGRD 1150
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
+ ++YY D+ +ME ++ K S Q ++ + ++M+ YCE C
Sbjct: 1151 GYEAHCIMYYSYGDKSKMESMIEKGDSSAEQKRIHKD--------NLAKMIMYCENVVEC 1202
Query: 299 RRKKILESFGEQIPVSLCKNSCDACK 324
RR + L FGE+ +LCK +CD C+
Sbjct: 1203 RRVQQLAYFGEKFDRALCKRTCDNCR 1228
>gi|410095931|ref|ZP_11290923.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409227962|gb|EKN20857.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 727
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/384 (38%), Positives = 215/384 (55%), Gaps = 30/384 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + L+ ++ ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 114 KLLYVAPESLTKEENVEFLRNVN----ISFYAVDEAHCISEWGHDFRPEYRRIRPIINEI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YEVR KD ++ ++
Sbjct: 170 GKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEVRPKD--ENVDREIIK 227
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+KAN IVYCL R +E + L A GI AYHAG++ RS+ D ++ + V
Sbjct: 228 YIKANEGKSGIVYCLSRKKVEEFADILKANGIKALAYHAGMDSGQRSANQDAFLLEKADV 287
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + + +Y D +++E
Sbjct: 288 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLE 347
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ C N
Sbjct: 348 --------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLHYFGEEYLEENCGN 397
Query: 319 SCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGGQYSEFWN-RDDE- 371
CD C +P + EL SAVL+ K F +I +M G + SE + + +E
Sbjct: 398 -CDNCLNPKKQVE-AKELLSAVLEVISTLKEKFKADYIV--NMLVGNETSEIQSYKHNEL 453
Query: 372 ---ASGSEEDISDCDGNINLVIIS 392
SG++ED + I +I+
Sbjct: 454 EVFGSGTDEDDKTWNAVIRQALIA 477
>gi|24646066|ref|NP_524319.2| bloom syndrome helicase ortholog [Drosophila melanogaster]
gi|17366114|sp|Q9VGI8.1|BLM_DROME RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName:
Full=Mutagen-sensitive protein 309; AltName: Full=RecQ
helicase homolog
gi|7299503|gb|AAF54691.1| bloom syndrome helicase ortholog [Drosophila melanogaster]
Length = 1487
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 191/324 (58%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 819 IYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 878
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V
Sbjct: 879 PDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLP 938
Query: 126 KDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + D+ +++ I+YCL R CDE S + G+ +YHAGL D R
Sbjct: 939 KKGVS-TLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDR 997
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DW++ + +V+ ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 998 ESRQKDWLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVAD 1057
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D R++ +L ++ + + K + + ++V YCE + CRR +
Sbjct: 1058 CILYYNYSDMLRIKKMLDSDK-------ALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQ 1110
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L+ FGE C + +CD C
Sbjct: 1111 LDYFGEHFTSEQCLENRETACDNC 1134
>gi|167747470|ref|ZP_02419597.1| hypothetical protein ANACAC_02191 [Anaerostipes caccae DSM 14662]
gi|167652832|gb|EDR96961.1| ATP-dependent DNA helicase RecQ [Anaerostipes caccae DSM 14662]
Length = 616
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 192/317 (60%), Gaps = 13/317 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGL-LNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++YV PE T GF L+ S G+ ++ +A+DEAHC+S WG DFRPSY K+ S
Sbjct: 108 KIIYVAPERLETEGF---LRFALSPGVDISFLAVDEAHCVSQWGQDFRPSYLKILSFLEK 164
Query: 78 LPDVPIL-ALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP P+L A TATA +V++DV++ L L++PLV+ + F+R NLF+ V+ D Y +L
Sbjct: 165 LPRRPVLGAYTATATVEVKEDVLDILNLRDPLVVTTGFDRANLFFGVKKPR---DKYREL 221
Query: 137 CSVLKANGD----TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
S L+ + + IVYCL R + +E+ L G S YHAGL+D R DD+I
Sbjct: 222 ESYLREKEEKMPGSSGIVYCLSRKSVEEVCYQLREAGFSVTRYHAGLSDTERRENQDDFI 281
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
R+Q++VAT AFGMGID+ DVR V H+N+PK+ME++YQE+GRAGRD P++ +LY+G
Sbjct: 282 YDRRQIMVATNAFGMGIDKPDVRFVIHYNMPKNMESYYQEAGRAGRDGEPAECILYFGAA 341
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D+R F++ + TR +K + QM YC SGC R IL+ FGE+
Sbjct: 342 DQRTNRFLIEHGEDNQELDEETRRIVMEKDLGRLKQMTFYCATSGCLRHYILDYFGEESS 401
Query: 313 VSLCKNSCDACKHPNLL 329
C+N + + +LL
Sbjct: 402 AE-CRNCSNCLEEFDLL 417
>gi|332882051|ref|ZP_08449686.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357048209|ref|ZP_09109763.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332679975|gb|EGJ52937.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355528792|gb|EHG98270.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 608
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/311 (42%), Positives = 186/311 (59%), Gaps = 23/311 (7%)
Query: 18 LRLLYVTPE--LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
L+LLY++PE + P + +K ++L A+DEAHCIS WGHDFRP Y +L LR
Sbjct: 104 LKLLYISPERLMLELPYLIRDMK-------VSLFAVDEAHCISQWGHDFRPEYAQLGLLR 156
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
PDVPI+ALTATA ++D+ + L L +P+V SSF+RPNL +V+ D
Sbjct: 157 QTFPDVPIVALTATADRLTREDIQKQLALSDPVVFISSFDRPNLSLDVKRGYQKKDKDRA 216
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ ++ + D C I+YCL + T + ++ L I+ AYHAGL + R DD+I R
Sbjct: 217 ILELIARHPDDCGIIYCLSKKTTESVAEMLRGHDIAAVAYHAGLPTEERERAQDDFIHDR 276
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QVV ATVAFGMGID+ +VR V H+N+PKS+E FYQE GRAGRD LP++++L+Y + D
Sbjct: 277 VQVVCATVAFGMGIDKSNVRFVIHYNLPKSIEGFYQEIGRAGRDGLPAETVLFYSLGDLV 336
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSL 315
++ SK +Q RE + +K +M +Y E CRR+ +L FGE
Sbjct: 337 QL--------SKFAQESGQREINMEK----LRRMQEYAESDVCRRRILLNYFGEHTDGD- 383
Query: 316 CKNSCDACKHP 326
C N CD CK+P
Sbjct: 384 CGN-CDVCKNP 393
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 19/326 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L +++ ++ IDEAHC+S WGHDFR
Sbjct: 671 IYRDLESHPPMVKLLYVTPEKISSSARFQDILDTLNANNYISRFVIDEAHCVSQWGHDFR 730
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y+V
Sbjct: 731 PDYKKLGILKKRFPNVPTIALTATATPRVRLDILSQLNLKNCKWFLSSFNRSNLRYKVLP 790
Query: 126 K---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K +DD A + ++ I+YCL R CDE++ + G+ AYHAGL D
Sbjct: 791 KKGASTIDDMSA---YIRTKPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTDS 847
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R DW++++ +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 848 EREGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEV 907
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +LYY D R++ ++ ++ + + K I + ++V YCE + CRR
Sbjct: 908 ADCILYYNYSDMLRLKKMMDGDK-------ALQYNVKKMHIDNLYRIVGYCENITDCRRA 960
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C +CD C
Sbjct: 961 QQLDYFGEHFTSEQCLENRATACDNC 986
>gi|428170384|gb|EKX39309.1| hypothetical protein GUITHDRAFT_76434 [Guillardia theta CCMP2712]
Length = 434
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/267 (46%), Positives = 171/267 (64%), Gaps = 18/267 (6%)
Query: 16 PSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
P +RLLYVTPEL T F L ++ G +NL+AIDEAHC+S WGH+FRP +RKL S+
Sbjct: 147 PMMRLLYVTPELLCTSNFQQDLSILYDGGYINLIAIDEAHCVSEWGHEFRPCFRKLGSIH 206
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL---DDA 132
P VP LALTATA +V++DV+ L ++ + SF+RPN+ Y+VRYKDL+ +
Sbjct: 207 QRFPSVPWLALTATATEQVRRDVVNILKIKVDKIFMQSFDRPNIRYQVRYKDLIGEDEQV 266
Query: 133 YADLCSVLKAN------GDTCA---------IVYCLERTTCDELSAYLSAGGISCAAYHA 177
+ D+ S + + G+ A I+YC + +CD L+ LSA G+ AYHA
Sbjct: 267 FEDIASFVGESLNSLPRGEPVAAGLQYACSGIIYCHTKASCDALAQQLSAIGVKAKAYHA 326
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL + R V D+W+ +VV AT+AFGMGID+KDVR V H ++PKS+EA+YQE+GRAG
Sbjct: 327 GLRPRERMQVQDEWMEGVTKVVCATIAFGMGIDKKDVRFVIHQSMPKSLEAYYQETGRAG 386
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKN 264
RD S++L+Y+ DD F+L K+
Sbjct: 387 RDGGESEALMYFSEDDANLHRFLLRKS 413
>gi|126179265|ref|YP_001047230.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862059|gb|ABN57248.1| ATP-dependent DNA helicase, RecQ family [Methanoculleus marisnigri
JR1]
Length = 419
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/318 (43%), Positives = 183/318 (57%), Gaps = 18/318 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+I +L G +++LYV+PE F+ + + + L+A+DEAHCIS WGH FR
Sbjct: 97 RILSELKEGL--IQILYVSPEKAVGEDFIDLMASLP----VTLIAVDEAHCISMWGHQFR 150
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR LS L+ P VP++ALTATA P V+ D+ L L +P V SFNR NL Y V
Sbjct: 151 PEYRSLSVLKERFPGVPMVALTATATPDVRDDIARQLNLSDPSVYVGSFNRENLRYVVVG 210
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ +DAY L + L+ IVY R + L+A L AGGI YHAG+ AR
Sbjct: 211 KE--EDAYERLRAYLRGRRGDAGIVYVATRDGAETLAARLRAGGIPALPYHAGMTAAARR 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D +I + VV AT AFGMGID+ DVR V H+++PK++EA+YQESGRAGRD S
Sbjct: 269 ETQDRFIGGKVPVVCATSAFGMGIDKPDVRFVVHYDMPKTLEAYYQESGRAGRDGKESDC 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+LYY +D RR+ + ++ + Q K + S MVDYC + CRRK +L
Sbjct: 329 ILYYSDEDARRLRSFIDRDLASEFQ--------RKVARSKLQSMVDYCTTTECRRKALLG 380
Query: 306 SFGEQIPVSLCKNSCDAC 323
FGE+I C N CDAC
Sbjct: 381 YFGERIE-EPC-NGCDAC 396
>gi|429750375|ref|ZP_19283426.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429165304|gb|EKY07364.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 727
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 102 EVMEDISNGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L + + V KSSFNRPNL+YEVR
Sbjct: 156 PEYRNIKTIIERLGTNIPIVALTATATPKVQEDILKNLAMTDANVFKSSFNRPNLYYEVR 215
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R +EL+ L GIS YHAGL+ K R
Sbjct: 216 PK--TKNVDADIIRFVKQNPKKSGIIYCLSRKKVEELTQTLQVNGISAVPYHAGLDAKTR 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 274 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 333
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 334 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 382
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 383 LHYFGEE 389
>gi|427416527|ref|ZP_18906710.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
gi|425759240|gb|EKV00093.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7375]
Length = 736
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 186/309 (60%), Gaps = 14/309 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY+ PE P F L++I L+ AIDEAHC+S WGHDFRP YR+L L+
Sbjct: 116 IKLLYLAPERLMNPSFWPLLEQIQQTVGLSAFAIDEAHCVSEWGHDFRPEYRQLFQLKQQ 175
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA +V++D+++ L L +P V S FNR NL+YEV K +Y L
Sbjct: 176 FPQVPVMALTATATERVRQDIIQQLRLNDPQVFVSGFNRQNLYYEVTPKT--KQSYDHLL 233
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++K I+YCL R +E++ L GIS YHAGL+ K R + +I +
Sbjct: 234 KLVKQQSG-AGIIYCLSRKRVNEIAFRLKQDGISALPYHAGLSAKERQGNQEQFIRDDVR 292
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD P+ +++ D +
Sbjct: 293 IIVATIAFGMGINKPDVRFVIHYDLPRTIESYYQESGRAGRDGDPANCTVFFSYADVATV 352
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E+++S+ + Q + ++ +++Y E + CRRK L FGE P + C+
Sbjct: 353 EYLISQKPDEQEQRIARQQ---------LRHVINYAESAVCRRKIQLSYFGESFPGN-CQ 402
Query: 318 NSCDACKHP 326
N CD C +P
Sbjct: 403 N-CDNCLNP 410
>gi|325268722|ref|ZP_08135351.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
gi|324988966|gb|EGC20920.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
Length = 727
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/308 (42%), Positives = 178/308 (57%), Gaps = 15/308 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ LK + ++ AIDEAHCIS WGHDFRP YRK+ +
Sbjct: 114 KLLYVAPESLNKEENIAFLKSVK----ISFYAIDEAHCISEWGHDFRPEYRKIRHAIEAI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D++ SL +++ + KSSFNRPNL+YEVR K DD +
Sbjct: 170 GVAPVIALTATATDKVRTDIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTDRQIIK 229
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K + I+YCL R +EL+A L A I A YHAGL+ + RS DD++ V
Sbjct: 230 FIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHAGLDSETRSKTQDDFLMEDLDV 289
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +++Y D ++E
Sbjct: 290 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGICIVFYSKKDLNKLE 349
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + + Y E S CRRK +L FGE+ P C
Sbjct: 350 --------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLHYFGEEYPKDNC-G 398
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 399 MCDNCLHP 406
>gi|315223920|ref|ZP_07865765.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
gi|314946092|gb|EFS98096.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
Length = 729
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L +Q V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 336 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|420158748|ref|ZP_14665562.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
gi|394763235|gb|EJF45355.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
Length = 727
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 102 EVMEDISAGKT--KLLYVAPESLIKEKYANFLKTVP----ISFVAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L +Q V KSSFNRPNL+YEVR
Sbjct: 156 PEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVR 215
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 216 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 274 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 333
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 334 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 382
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 383 LHYFGEE 389
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 189/327 (57%), Gaps = 20/327 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y +L +P+L++LYVTPE ++A+ F + + ++ R LL IDEAHC+S WGHDFR
Sbjct: 491 VYRELCKKEPALKILYVTPEKISASQKFCNTMTTLYERDLLTRFVIDEAHCVSQWGHDFR 550
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y+KL LR P VP +ALTATA P+V+ D++ L + P SSFNRPNL Y +
Sbjct: 551 PDYKKLKCLRKNYPKVPTMALTATATPRVRTDILHQLDMTKPKWFMSSFNRPNLRYSIIS 610
Query: 124 -RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+ K+ D+ A + + K + C IVYCL R C++ +A+L I +YHAGL D
Sbjct: 611 KKGKNCSDEVVAMIKTKFK---NVCGIVYCLSRKDCEDYAAHLKKNCIKALSYHAGLTDN 667
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R++ WI V+ AT+AFGMGID+ +VR V H +PKS+E +YQESGRAGRD
Sbjct: 668 QRNNCQGKWILDEIHVICATIAFGMGIDKPNVRYVIHAALPKSIEGYYQESGRAGRDGEI 727
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRK 301
+ +L+Y D R+ ++ + S N Q T + + +MV +CE + CRR
Sbjct: 728 ADCILFYNYADMHRIRKMIEMDNS-NPQVIRTH-------MDNLFKMVAFCENTTDCRRS 779
Query: 302 KILESFGEQIPVSLCKNS----CDACK 324
L FGE C +S CD C+
Sbjct: 780 LQLNYFGEVFNREQCASSKITACDNCR 806
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 11/327 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI+++L+S +LLYVTPE A + + L+ ++SRGLL IDEAHC+S WGHDF
Sbjct: 534 KIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDF 593
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 594 RPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 653
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D+ +K N D C I+YCL R C+++S L G A YH + +
Sbjct: 654 PK--TKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQ 711
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ + W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 712 RAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 771
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSSK---KSISDFSQMVDYCEGS- 296
+LYYG D R++ ++S+ +QS + ++ S + + + +MV YCE
Sbjct: 772 SCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEV 831
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L GE+ + CK +CD C
Sbjct: 832 ECRRFLQLVHLGEKFDSTNCKKTCDNC 858
>gi|56461647|ref|YP_156928.1| superfamily II DNA helicase [Idiomarina loihiensis L2TR]
gi|56180657|gb|AAV83379.1| Superfamily II DNA helicase, RecQ [Idiomarina loihiensis L2TR]
Length = 614
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 187/321 (58%), Gaps = 26/321 (8%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
+ L SG ++LLYV+PE P F+ +L+ + LN +A+DEAHCIS WGHDFRP Y
Sbjct: 110 QGLQSG--DIKLLYVSPERVLQPTFIERLQTLK----LNFIAVDEAHCISQWGHDFRPEY 163
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
KL LRNYLP+VP +ALTATA Q D++E LCL+ PLV +SSF+RPN+ Y V+ K
Sbjct: 164 GKLGVLRNYLPNVPFMALTATADSATQHDIIERLCLREPLVHRSSFDRPNIRYVVQEK-- 221
Query: 129 LDDAYADLCSV---LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
Y L V +K I+YC R +ELS L G+ A YHAG+ + +
Sbjct: 222 ----YKPLKQVRDYVKKQKGAAGIIYCGSRKKTEELSESLQQAGVRAAPYHAGIEHQIKE 277
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S L ++ VVVATVAFGMGI++ ++R V HF+IP+S+E++YQE+GRAGRD LP+++
Sbjct: 278 STLRQFLRDDIDVVVATVAFGMGINKPNIRFVIHFDIPRSVESYYQETGRAGRDGLPAEA 337
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
++ Y D + + ++ +++ + ++ FS M E CRR +L
Sbjct: 338 VMLYDPRDAQWIRRMIEDQENEQRRLVEAQK---------FSAMQAMAEAQTCRRLVVLN 388
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
F E C N CD C P
Sbjct: 389 YFNEYSDKE-CGN-CDLCLDP 407
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 189/332 (56%), Gaps = 32/332 (9%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I ++L KPS +LLYVTPE + P F+ LK +H +G L +DEAHC+S WGHDFR
Sbjct: 298 ILQELRKDKPSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHDFR 357
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L L+ P VP++ALTATA V++D++++L + LVL++SF+RPNL YEV
Sbjct: 358 PDYKRLGCLKQNFPVVPVMALTATATHSVREDILKTLRIPGALVLETSFDRPNLKYEVIG 417
Query: 126 K---------DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAY 175
K DLL D + + C IVYCL + C E+S +L+ I Y
Sbjct: 418 KTKESLKQLGDLLRDRFK----------NQCGIVYCLSKNECVEVSKFLNEKCKIKAVYY 467
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL + R V W + +V AT+AFGMGID+ DVR V H + KS+E++YQESGR
Sbjct: 468 HAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGR 527
Query: 236 AGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE- 294
AGRD P+ + Y D R+ +L Q +SF K +++ +M YCE
Sbjct: 528 AGRDSHPATCIALYQKKDFSRVVCMLRSGQGYKRESF-------KPAMAQAQKMKSYCEL 580
Query: 295 GSGCRRKKILESFGEQIPVSLCK---NSCDAC 323
+ CRR+ +LE FGE CK + CD C
Sbjct: 581 KAECRRQVLLEHFGESFDQKACKFGSHPCDNC 612
>gi|256820777|ref|YP_003142056.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429746398|ref|ZP_19279750.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429756068|ref|ZP_19288682.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|256582360|gb|ACU93495.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429166284|gb|EKY08277.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429172170|gb|EKY13749.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 729
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L +Q V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 336 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/321 (42%), Positives = 188/321 (58%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ +++ SG + +LLYV PE + LK L+ VAIDEAHCIS WGHDF
Sbjct: 97 NKVKKEVLSG--ATKLLYVAPESLTKEENVEFLKSAQ----LSFVAIDEAHCISEWGHDF 150
Query: 65 RPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ S+ + D +PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NLFYEV
Sbjct: 151 RPEYRKIKSIIAQIGDALPIIALTATATPKVQQDIQRNLNMEEADLFKSSFNRTNLFYEV 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K D L +K+ I+YCL R +E++ L GI+ A YHAGL
Sbjct: 211 RPK-AKSDTKKHLIKYVKSQKGKSGIIYCLSRKKVEEIAELLKVNGINAAPYHAGLESAM 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R DD+++ VVVAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 270 RIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y +D ++E K ++ ER + K + +M Y E S CRR+ +
Sbjct: 330 HCLMFYKYEDIVKLE--------KFNKDKPVNERENAKVL--LQEMAAYAESSVCRRRVL 379
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE + C CD CK
Sbjct: 380 LHYFGESLNED-C-GFCDNCK 398
>gi|402846704|ref|ZP_10895013.1| putative ATP-dependent DNA helicase RecQ [Porphyromonas sp. oral
taxon 279 str. F0450]
gi|402267396|gb|EJU16791.1| putative ATP-dependent DNA helicase RecQ [Porphyromonas sp. oral
taxon 279 str. F0450]
Length = 539
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 187/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ G+ +LLYV PE + L++I ++ A+DEAHCIS WGHDFR
Sbjct: 102 EVKEDVRQGRT--KLLYVAPESLHKKENIKLLQEIP----ISFYAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ ++ + D PI+ALTATA PKVQ D+M++L +++ V +SSFNRPNL Y +
Sbjct: 156 PEYRRIRAIVTEIADRPIMALTATATPKVQHDIMKNLGMESAAVFQSSFNRPNLLYRIHP 215
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ + +N IVYC+ RT L+ L A GI YHAGL+ K R+
Sbjct: 216 KTA--ESERDIVRYILSNPKKSGIVYCMRRTQVMNLTEVLQANGIKALPYHAGLDAKERA 273
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D +I R +V+VAT+AFGMGID+ DVR V HF++PKS+E +YQE+GRAGRD
Sbjct: 274 ENQDAFIEERAEVIVATIAFGMGIDKPDVRYVIHFDMPKSLEGYYQETGRAGRDGGEGVC 333
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ YY DD ++E +K +S Q + + + DY E S CRR +L
Sbjct: 334 IAYYDHDDLEKLER-FTKGKSVADQEIAR---------ALLRETADYAETSICRRSFLLN 383
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C SCD C P
Sbjct: 384 YFGERYEAENC-GSCDNCLVP 403
>gi|404449892|ref|ZP_11014879.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
gi|403764371|gb|EJZ25272.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
Length = 726
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 197/339 (58%), Gaps = 26/339 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPG--FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K+ +++ SGK +LLYV PE LT F+ K L+ VAIDEAHCIS WGH
Sbjct: 98 KVKKEVLSGKT--KLLYVAPESLTKEENVLFLKDAK-------LSFVAIDEAHCISEWGH 148
Query: 63 DFRPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YRK+ ++ + ++PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NL+Y
Sbjct: 149 DFRPEYRKIKTIIAQIGSNLPIVALTATATPKVQQDIQRNLQMEEADLFKSSFNRTNLYY 208
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K + ++ + +K+ I+YCL R +E++ L GI A YHAGL
Sbjct: 209 EVRPK-VKNETKKQIIKYIKSQKGKSGIIYCLSRKKVEEIANLLKVNGIKAAPYHAGLEQ 267
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R DD+++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 268 NVRVKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGL 327
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L++Y DD ++E K ++ ER + K + +M Y E S CRRK
Sbjct: 328 EGHCLMFYKYDDIVKLE--------KFNKDKPVTERENAKIL--LQEMAAYAESSICRRK 377
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAV 340
+L FGE + C CD CK P + LT+ +
Sbjct: 378 FLLHYFGEMLEDD-C-GHCDNCKKPKEKFDGIEHLTAVI 414
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 185/310 (59%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPELTATP-GFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLYVTPE+ + F + ++ +H +G L + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 178 IELLYVTPEMVSKNITFNNGMRTLHDKGKLARIVIDEAHCVSQWGHDFRPDYKTLGQVRQ 237
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V D+ +L + N SFNRPNL+YEVR K ++
Sbjct: 238 RYPGVPVMALTATATQNVIVDIRHNLGMDNCQTFSQSFNRPNLYYEVRGKTTNAKCMDEI 297
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
S++K+ + IVY + R ++++ LS GI+ YHAG++ + ++ V W +
Sbjct: 298 ASLIKSKYANQSGIVYTVSRKNAEKVAESLSDQGITARHYHAGVDPQEKAEVQIAWQQGQ 357
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+++VAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 358 IKIIVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGDPSDCILFYGKQDIR 417
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++++ Q ++ +S +++ +C+ S CRR +IL FGE +
Sbjct: 418 ILKKLIAEGDGNKEQ--------KERQMSMLNRVTAFCDNKSDCRRAEILRYFGEDFSAA 469
Query: 315 LCKNSCDACK 324
C +CD CK
Sbjct: 470 QCGKTCDNCK 479
>gi|357113938|ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 191/329 (58%), Gaps = 26/329 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ IY+ L+ G+ L++LYVTPE ++ + FMSKL+K H G L+LVAIDEAHC S W
Sbjct: 166 EVEKLIYKALEKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLVAIDEAHCCSQW 225
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNL+
Sbjct: 226 GHDFRPDYKNLGILKIQFPSVPMIALTATATSKVQMDLIEMLHIPRCVKFVSTVNRPNLY 285
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ + N ++ IVYC R C++++ L GI+ YH
Sbjct: 286 YKVYEKSSVGKVVIDEIANFITESYPNKES-GIVYCFSRKECEQVAKELRERGIAADYYH 344
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ AR V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 345 ADMDSVAREKVHMRWSKSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 404
Query: 237 GRDQLPSKSLLYYGMDD-RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG 295
GRD LPS+ +LYY D R+ + +N + + +V YC+
Sbjct: 405 GRDGLPSECVLYYRPGDVPRQSSMVFYENC----------------GLQNLYDIVRYCQS 448
Query: 296 -SGCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR + FGE V C CD C
Sbjct: 449 KKSCRRGAFFQHFGE--AVQECNGMCDNC 475
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 190/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 740 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 799
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 800 QDYKRMNMLRQRFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 859
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 860 KKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARD 919
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 920 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISH 979
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + TRE +++ MV YCE + CRR ++
Sbjct: 980 CVLFYTYHDVTRLKRLIMMEKDGN---YHTRE----THVNNLYSMVHYCENITECRRIQL 1032
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1033 LAYFGEKGFNPDFCKKHPDVSCDNC 1057
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 187/327 (57%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 628 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 687
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 688 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFTMSFNRHNLKYYV 747
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G+ AYHAGL+D A
Sbjct: 748 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKNGLPALAYHAGLSDSA 807
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 808 RDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEI 867
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R++ ++ + N + T ++ MV YCE + CRR
Sbjct: 868 SHCLLFYTYYDVTRLKRLILMEKDGNHHTRETH-------FNNLYSMVHYCENITECRRI 920
Query: 302 KILESFGE-QIPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 921 QLLAYFGEIGFNPDFCKKHPEVSCDNC 947
>gi|328787553|ref|XP_624695.3| PREDICTED: ATP-dependent DNA helicase Q5 [Apis mellifera]
Length = 849
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 199/342 (58%), Gaps = 21/342 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I +DL S P ++LLYVTPE+ A F + K++ + L+ IDEAHC+S WGHDFRP
Sbjct: 113 IIKDLTSNSPKIKLLYVTPEMGAQQHFQDIIIKLNKKKTLSYFVIDEAHCLSQWGHDFRP 172
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
SYR+L + P++PI+ALTATAA +V+ D+++ L ++NP + R NL+Y+V +
Sbjct: 173 SYRQLGIFKKLCPNIPIIALTATAAKEVKDDILQCLNMKNPAIFSVPVFRSNLYYDVWFL 232
Query: 127 DLLDDAYADLCS-VLKANG----------DTCAIVYCLERTTCDELSAYLSAGGISCAAY 175
++LD + L + ++++ G C I+YC ++ + ++ LS GIS AY
Sbjct: 233 EILDKPFEHLKNFIIESLGCQDKSIPKVKKGCGIIYCRKKEATEIIAHKLSNSGISTLAY 292
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL ++ R+ V + W S V+ AT +FGMG+D+ VR V H+ +P+++ A+YQESGR
Sbjct: 293 HAGLKNQERNEVQNKWTSGEVPVIAATCSFGMGVDKGSVRFVVHWTVPQNIAAYYQESGR 352
Query: 236 AGRDQLPSKSLLYYGMDDRRRMEFILSKN-QSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
AGRD P+ +Y+ ++ + F++ + KNS+ R + +F + V YC
Sbjct: 353 AGRDGKPAFCRIYFSNEEYAPIAFLIKEEITKKNSELVKLRWK-------NFEKTVSYCL 405
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
+ CR + FG+ P CK+ CD CK +++ + +
Sbjct: 406 EAKCRHAVFSKYFGDNPP--QCKDRCDVCKDKDIVQTRISQF 445
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 193/327 (59%), Gaps = 11/327 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI+++L+S +LLYVTPE A + + L+ ++SRGLL IDEAHC+S WGHDF
Sbjct: 528 KIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLNSRGLLARFVIDEAHCVSQWGHDF 587
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 588 RPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 647
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D+ +K N D C I+YCL R C+++S L G A YH + +
Sbjct: 648 PK--TKKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQ 705
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ + W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 706 RAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 765
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSSK---KSISDFSQMVDYCEGS- 296
+LYYG D R++ ++S+ +QS + ++ S + + + +MV YCE
Sbjct: 766 SCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEV 825
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L GE+ + CK +CD C
Sbjct: 826 ECRRFLQLVHLGEKFDSTNCKKTCDNC 852
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 190/325 (58%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 740 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 799
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 800 QDYKRMNMLRQRFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLP 859
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 860 KKPKKVALDCLEWIRKHHPYDSGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARD 919
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 920 EVQHKWINQDNCQVICATIAFGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISH 979
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + TRE +++ MV YCE + CRR ++
Sbjct: 980 CVLFYTYHDVTRLKRLIMMEKDGN---YHTRE----THVNNLYSMVHYCENITECRRIQL 1032
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE+ CK SCD C
Sbjct: 1033 LAYFGEKGFNPDFCKKHPDVSCDNC 1057
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 191/323 (59%), Gaps = 20/323 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ +++ SGK +LLYV PE + LK L+ VAIDEAHCIS WGHDF
Sbjct: 97 NKVKKEVLSGKT--KLLYVAPESLTKEENILFLKD----AKLSFVAIDEAHCISEWGHDF 150
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ S+ L ++PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NL+YE+
Sbjct: 151 RPEYRKIKSIIAQLGKELPIIALTATATPKVQQDIQRNLQMEEADLFKSSFNRTNLYYEI 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K L ++ + +K+ I+YCL R +E++ L GI A YHAGL+
Sbjct: 211 RPK-LKNETKKQIIKYIKSQKGKSGIIYCLSRKKVEEIAELLKVNGIKAAPYHAGLDQSV 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R DD+++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 270 RIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y +D ++E K ++ ER + K + +M Y E S CRRK +
Sbjct: 330 HCLMFYRYEDIIKLE--------KFNKDKPVTERENAKIL--LQEMAAYAESSICRRKFL 379
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE I C CD CK P
Sbjct: 380 LHYFGE-ILEEDC-GFCDNCKKP 400
>gi|397781220|ref|YP_006545693.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396939722|emb|CCJ36977.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 604
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 178/309 (57%), Gaps = 16/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+R+LYV+PE P F+S LKK R L+AIDEAHCIS WGH+FRP YR+L L+
Sbjct: 107 IRVLYVSPERAVQPFFLSLLKKADVR----LIAIDEAHCISMWGHNFRPEYRRLRVLKER 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P VQ D+ + L L+NP SFNR NL Y V K + L
Sbjct: 163 FPAVPVIALTATAIPAVQDDIAKQLALKNPARFVGSFNRTNLTYRVVPKTRY---FPRLV 219
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + D I+YC + ++L+ L G S YHAGL D R + +
Sbjct: 220 RYLNEHRDDAGIIYCFSQKATEDLAEKLRGKGFSALPYHAGLPDAVRDEHQEAFSHGDVG 279
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++ ATVAFGMGID+ DVR V H ++PK +E++YQE+GRAGRD P+ +L+Y D +
Sbjct: 280 IICATVAFGMGIDKPDVRFVIHTDLPKDLESYYQETGRAGRDGEPADCILFYSRGDYNTI 339
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+++ K + +TR+ ++ + M+DYCE +GCRRK +L FGE P C
Sbjct: 340 RYLIEKECAD-----ATRKDAAYRKA---GAMLDYCETTGCRRKFLLTYFGEAYPEERC- 390
Query: 318 NSCDACKHP 326
CD C+ P
Sbjct: 391 GGCDRCETP 399
>gi|420149707|ref|ZP_14656877.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753188|gb|EJF36768.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 732
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 107 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 160
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L +Q V KSSFNRPNL+YEVR
Sbjct: 161 PEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVR 220
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 221 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 278
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 279 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 338
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 339 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 387
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 388 LHYFGEE 394
>gi|374629362|ref|ZP_09701747.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
gi|373907475|gb|EHQ35579.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
Length = 1165
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 189/306 (61%), Gaps = 15/306 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++L+V+PE F+S LKK+ ++L+A+DEAHCIS WGH+FRP YR++ LR+
Sbjct: 117 IKILFVSPERVTNNDFISFLKKLK----ISLIAVDEAHCISMWGHNFRPEYREIRVLRDT 172
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PDVPI+ALTATA P+V+ D+++ L L++P V SFNR NL+Y V+ K A +
Sbjct: 173 FPDVPIIALTATAIPEVRNDIIKQLELRDPNVYVGSFNRENLYYYVKEKK---KAKEQIL 229
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L N +C I+YCL R T +E++ +L G + +HA L + + ++++ +
Sbjct: 230 QYLNENHGSCGIIYCLSRKTTEEIAGFLRNNGFNAKPFHANLQEDVKRETQEEFLYGKTP 289
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++ +TVAFGMG+D+ D+R V H++ PK +E++YQE+GRAGRD+ S + +Y + D ++
Sbjct: 290 IICSTVAFGMGVDKPDIRFVIHYDPPKDLESYYQETGRAGRDRENSDCIFFYSLGDFSKI 349
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++ + S NS R + K I+D ++++CE S CRRK +L FGE C
Sbjct: 350 RNMVYEENSGNS----GRRSIAMKRIND---LINFCETSQCRRKYLLSYFGEDYNEEPCP 402
Query: 318 NSCDAC 323
CD C
Sbjct: 403 -GCDNC 407
>gi|340723100|ref|XP_003399935.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Bombus terrestris]
Length = 1011
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 196/335 (58%), Gaps = 25/335 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+T I +DL S P ++LLYVTPE+ A F + + +++ L+ +DEAHC+S WGHD
Sbjct: 96 RTAIMKDLASNSPKIKLLYVTPEMGAQQHFQATITRLNKIKALSYFVVDEAHCLSQWGHD 155
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYR+L + P++PI+ALTATAA +V+ D+++ L ++NP + RPNL+Y+V
Sbjct: 156 FRPSYRELGKFKKLCPNIPIIALTATAAKEVKDDILQCLNMKNPAIFSVPVFRPNLYYDV 215
Query: 124 RYKDLLDDAYADL------------CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
+ ++LD + L S+ KA + C I+YC ++ + ++ LS+ GI
Sbjct: 216 WFLEILDKPFEHLRNFVIEALNSQDRSIPKAKKN-CGIIYCRKKEATEIIAHKLSSSGIP 274
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AYHAGL ++ R+ V + W S V+ AT +FGMG+D+ VR V H+ +P+++ A+YQ
Sbjct: 275 ALAYHAGLKNQERNEVQNKWTSGEVPVIAATCSFGMGVDKGSVRFVVHWTVPQNIAAYYQ 334
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--KKSISDFSQM 289
ESGRAGRD P+ +Y+ + + F++ + TR++S K + +F +
Sbjct: 335 ESGRAGRDGKPAFCRIYFSNKEYSAIAFLIKEE--------VTRKKSELVKLNWKNFEKT 386
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACK 324
V YC + CR + FG+ P C++ CD CK
Sbjct: 387 VSYCLEAKCRHAVFSKYFGDNPPP--CEDRCDVCK 419
>gi|255037353|ref|YP_003087974.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
gi|254950109|gb|ACT94809.1| ATP-dependent DNA helicase RecQ [Dyadobacter fermentans DSM 18053]
Length = 737
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 204/362 (56%), Gaps = 23/362 (6%)
Query: 12 DSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
D+ +L+LLY+ PE + LK++ ++ VAIDEAHCIS WGHDFRP YR++
Sbjct: 110 DALDGTLKLLYIAPESLTKEDNLDFLKRVK----ISFVAIDEAHCISEWGHDFRPEYRRI 165
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
+ + ++PI+ALTATA PKVQ+D+ ++L ++ KSSFNR NL+YE+R K D
Sbjct: 166 HGIIENIGNLPIIALTATATPKVQQDIRKNLQMEEAETFKSSFNRKNLYYEIRPKK---D 222
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
L ++ N IVYCL R T +E++ L+ + YHAGL+ R + D +
Sbjct: 223 VKKQLIRYIRNNKGKSGIVYCLSRKTVEEVAELLNVNDVRALPYHAGLDANTRMANQDAF 282
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L L++Y
Sbjct: 283 LNEECDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRAGRDGLEGNCLMFYSY 342
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
DD +++E K ++ + ER + + + ++MV Y CRR+++L FGE +
Sbjct: 343 DDIQKLE--------KFNKDKTVTERDNARHL--LNEMVAYSTLGVCRRRQLLSYFGEYL 392
Query: 312 PVSLCKNSCDACKHPNLLAKYLGE----LTSAVLQKNHFSQIFISSQDMTDGGQYSEFWN 367
C CD C P K + L S +L + F I+ + QY + +
Sbjct: 393 EKD-C-GYCDNCNKPTEKIKVQDDVILILKSVLLTEQRFDADHIADLLTSTDNQYVKSYE 450
Query: 368 RD 369
D
Sbjct: 451 HD 452
>gi|393779596|ref|ZP_10367834.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609916|gb|EIW92711.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 727
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 186/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 102 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L +Q V KSSFNRPNL+YEVR
Sbjct: 156 PEYRNIRTIIERLGSNIPIVALTATATPKVQEDILKNLGMQEANVFKSSFNRPNLYYEVR 215
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 216 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 274 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 333
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 334 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 382
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 383 LHYFGEE 389
>gi|91772141|ref|YP_564833.1| ATP-dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
gi|91711156|gb|ABE51083.1| ATP dependent DNA helicase RecQ [Methanococcoides burtonii DSM
6242]
Length = 647
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 185/307 (60%), Gaps = 17/307 (5%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
+LYV PE M +++ S ++L AIDEAHCIS WGHDFRP YR++ L+ P
Sbjct: 106 ILYVAPERLC----MKSTQELLSHVNVSLFAIDEAHCISEWGHDFRPEYRRMGFLKKKYP 161
Query: 80 DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 139
DVP++ALTATA KV+++ ++ L L +P V +SF+R NL YE+R K+ + Y D+ S
Sbjct: 162 DVPVIALTATATAKVKENTIKQLDLVSPSVYVASFDRANLSYEIRPKN---NTYGDMVSY 218
Query: 140 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVV 199
LK I+YC R + + +S L+ G YHAGLND R + +I ++
Sbjct: 219 LKGQRGNSGIIYCNSRKSVESVSTKLNREGFHALPYHAGLNDAKRQDNQERFIRDDVDII 278
Query: 200 VATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEF 259
VATVAFGMGID+ +VR V H+++PK++E +YQE+GR GRD L +LY+ D ++++
Sbjct: 279 VATVAFGMGIDKPNVRFVIHYDLPKNLEGYYQETGRGGRDGLECDCILYFSRADWYKIKY 338
Query: 260 ILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNS 319
++ + K+ + +++ +M+DYCE + CRRK +L FGE++ C S
Sbjct: 339 LIDQKPKKSERDI---------AMTKLQEMIDYCESTSCRRKALLHYFGEELESDNC-GS 388
Query: 320 CDACKHP 326
CD C +P
Sbjct: 389 CDVCLNP 395
>gi|443322394|ref|ZP_21051417.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
gi|442787869|gb|ELR97579.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 73106]
Length = 701
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 191/310 (61%), Gaps = 14/310 (4%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LLYV PE + GF L +I ++ +AIDEAHC+S WG DFRP YR++ LR
Sbjct: 106 NIKLLYVAPERLLSEGFSVFLTQIQQDVGISALAIDEAHCVSEWGQDFRPEYRQIKGLRQ 165
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA +V++D+++ L L P V SFNRPNL+YEV KD D Y L
Sbjct: 166 RYPQVPMVALTATATTRVRQDIIQQLGLIKPGVYVDSFNRPNLYYEVVSKDKRD--YPQL 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+K + IVYCL R +E+++ L A GIS YH G++D RS + +I
Sbjct: 224 LKYIKLQQGS-GIVYCLSRRRVEEVASRLQADGISSLPYHGGMDDTVRSVYQNRFIGDDV 282
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+V+VAT+AFGMGI++ DVR V H+++P+++E++YQE GRAGRD + +L++ D R
Sbjct: 283 RVMVATIAFGMGINKPDVRFVFHYDLPRNLESYYQEVGRAGRDGERAICVLFFSRGDIRT 342
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+++++ + ++Q + + SS MVDY E + CRRK L FGE+ S C
Sbjct: 343 IDYLIKQKSDPSAQRLARQGLSS---------MVDYAESTVCRRKIQLSYFGERFSGS-C 392
Query: 317 KNSCDACKHP 326
+N CD C +P
Sbjct: 393 QN-CDNCLNP 401
>gi|379729697|ref|YP_005321893.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
gi|378575308|gb|AFC24309.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
Length = 737
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 204/349 (58%), Gaps = 28/349 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTA--TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++ +D+ SG + +LLY+ PE LT T F+S++K ++ VA+DEAHCIS WGH
Sbjct: 104 EVKQDIVSG--ATKLLYIAPETLTKEDTLRFLSQIK-------VSFVAVDEAHCISEWGH 154
Query: 63 DFRPSYRKLSSL-RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR++ S+ N ++PI+ALTATA PKV+ D++++L L+ P SFNR NLFY
Sbjct: 155 DFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMDIVKTLRLEEPREFMDSFNRDNLFY 214
Query: 122 EVRYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
EV+ K +D + +K + I+Y R T +E++ LS I A YHAGL
Sbjct: 215 EVQPKGKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVNDIKAAPYHAGLE 274
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
K RS D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQETGRAGRDG 334
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
+ L +Y D R+E L + + RE ++ ++M+ Y E + CRR
Sbjct: 335 QHAHCLTFYSYKDILRLEKFL------RDKPVAEREMGAQL----LAEMIAYAETTACRR 384
Query: 301 KKILESFGEQIPVSLCKNS--CDACK--HPNLLAKYLGELTSAVLQKNH 345
+ +L FGE+ +C+ CD CK HP AK +L V++ H
Sbjct: 385 RFLLHYFGEKYKDEVCRRDQMCDNCKKQHPTENAKEALQLLLQVVKDLH 433
>gi|196005803|ref|XP_002112768.1| hypothetical protein TRIADDRAFT_25695 [Trichoplax adhaerens]
gi|190584809|gb|EDV24878.1| hypothetical protein TRIADDRAFT_25695 [Trichoplax adhaerens]
Length = 388
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/278 (45%), Positives = 175/278 (62%), Gaps = 12/278 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + +DL +P++RLLYVTPEL AT F LK + R LN IDEAHC+S WGHD
Sbjct: 104 RNAVIKDLHDPEPTIRLLYVTPELAATSDFKRLLKHLFDRSRLNYFTIDEAHCVSHWGHD 163
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESL-CLQNPLVLKSSFNRPNLFYE 122
FRP YRKL +LR Y P VPI+ALTATA VQ+DV++SL + +SS R NL+Y+
Sbjct: 164 FRPDYRKLGNLREYFPSVPIIALTATANKTVQEDVIKSLHFRSSFQSFRSSCFRSNLYYD 223
Query: 123 VRYKDLLDDAYADL-----------CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
V +KDLL DA +L ++ + C I+YC R CD +S L+ GIS
Sbjct: 224 VIFKDLLTDALDNLRNFVLSSISGSIALNSTSSQGCGIIYCRTRDDCDNISDKLAGYGIS 283
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
C +YHAGL+ K R + +W+ +V+VAT++FGMG+D+ VR V H+ +PKSME++YQ
Sbjct: 284 CKSYHAGLSGKIREQIQREWMDGIVKVIVATISFGMGVDKASVRFVAHWCLPKSMESYYQ 343
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNS 269
ESGRAGRD + LYY ++R ++++L K + S
Sbjct: 344 ESGRAGRDGKLAFCRLYYSREERNVVQYLLKKEVKRQS 381
>gi|195327576|ref|XP_002030494.1| GM24539 [Drosophila sechellia]
gi|194119437|gb|EDW41480.1| GM24539 [Drosophila sechellia]
Length = 1059
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 197/344 (57%), Gaps = 17/344 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + +L+ LY+TPE AT F L +H L A+DEAHC+S WGHD
Sbjct: 101 RDRVIMDLKAVRTNLKFLYITPEQAATKFFQDLLHTLHKHKKLAYFAVDEAHCVSQWGHD 160
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN-RPNLFYE 122
FRP Y KL LR+ DV LALTATA+ +V++D+ + L L P+ S+ + R NLFY+
Sbjct: 161 FRPDYLKLGELRSKYSDVIWLALTATASREVKEDIYKQLRLHQPVAQFSTPSFRKNLFYD 220
Query: 123 VRYKDLLDDAYADLCSVL-------KANGDT------CAIVYCLERTTCDELSAYLSAGG 169
+ YK+ ++D + L K DT C IVYC R + ++ ++ G
Sbjct: 221 IVYKNSIEDDFQHLADFARHCLGDPKEFKDTPKPQRGCGIVYCRTRDQVERMAIGVTKQG 280
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I AYHAGL R+ V + W+ + ++ AT +FGMG+D+ VR V H+++P+++ A+
Sbjct: 281 IGAVAYHAGLKTGERTEVQEAWMRGDQPIICATNSFGMGVDKPSVRFVIHWDVPQNVAAY 340
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L S LYYG +D R + F+L +N + ++ +E ++++I F ++
Sbjct: 341 YQESGRAGRDGLQSYCRLYYGREDVRSIRFLL-QNDAHRARGRGDKELLTERAIKQFEKI 399
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
++CE + CR K + FG+ P C CD CK P K L
Sbjct: 400 TEFCERTTCRHKLFSDFFGD--PPPDCNGQCDVCKRPKKAEKAL 441
>gi|373957711|ref|ZP_09617671.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373894311|gb|EHQ30208.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 731
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 189/324 (58%), Gaps = 28/324 (8%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGL--LNLVAIDEAHCISSWGH 62
TK+ ED+ SGK +LLYV PE ++K + I L ++ VA+DEAHCIS WGH
Sbjct: 103 TKVKEDVLSGKT--KLLYVAPE------SLTKQENIDFLRLNSVSFVAVDEAHCISEWGH 154
Query: 63 DFRPSYRKLSS-LRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YRK+ + N ++PI+ALTATA PKVQ+D+ ++L + N + KSSFNR NLFY
Sbjct: 155 DFRPEYRKIRQVISNIGENIPIIALTATATPKVQQDIQKNLQMNNATIYKSSFNRGNLFY 214
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K + ++ +K + I+YCL R +E++ LS G+ YHAGL+
Sbjct: 215 EVRAKR---NVLKEIVRFVKQHTGKSGIIYCLSRKKVEEVAEALSLNGVKALPYHAGLDA 271
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ D ++ V+VAT+AFGMGID+ DVR V H ++PKSME +YQE+GRAGRD
Sbjct: 272 KVRADTQDRFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGRAGRDGG 331
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCR 299
L +Y D ++ Q F + +++ I +++DY E + CR
Sbjct: 332 EGVCLAFYSEKDIDKL------------QKFMKDKPVAEREIGTQILKEVIDYAESAVCR 379
Query: 300 RKKILESFGEQIPVSLCKNSCDAC 323
RK+IL FGE + C CD C
Sbjct: 380 RKQILHYFGENFNEAGCNCMCDNC 403
>gi|365961574|ref|YP_004943141.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
gi|365738255|gb|AEW87348.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
Length = 731
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/305 (42%), Positives = 183/305 (60%), Gaps = 20/305 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE ++ LK+ H ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKKDIASG--FTKLLYVAPESLTKEEYIDFLKE-HK---ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L ++PI+ LTATA PKVQ+D++++L + + V K+SFNRPNLFYEVR
Sbjct: 158 PEYRNLRNIIRALGEIPIIGLTATATPKVQEDILKNLEMSDANVFKASFNRPNLFYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + AD+ +K + ++YCL R +E++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNVEADIIRFIKQHKGKSGVIYCLSRKKVEEIAEVLKVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFMAGKPIAEQEVGFAL-----------LQEVVSYAETSMSRRKFLL 384
Query: 305 ESFGE 309
FGE
Sbjct: 385 HYFGE 389
>gi|224026746|ref|ZP_03645112.1| hypothetical protein BACCOPRO_03503 [Bacteroides coprophilus DSM
18228]
gi|224019982|gb|EEF77980.1| hypothetical protein BACCOPRO_03503 [Bacteroides coprophilus DSM
18228]
Length = 608
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 188/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L + F+ LK I ++L AIDEAHCIS WGHDFRP Y +L LR
Sbjct: 104 VKLLYISPERLLSELNFL--LKDIR----VSLFAIDEAHCISQWGHDFRPEYTQLKVLRQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VPI+ALTATA ++D+++ L ++NP V SSF+RPNL EV+ + +
Sbjct: 158 QFPNVPIVALTATADKITRQDIVQQLAMRNPQVFISSFDRPNLSLEVKRGYQQKEKIRSI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R T ++++ L G+ A YHAGL+ AR + DD+I+ R
Sbjct: 218 LQFIDRHPGESGIIYCMSRNTTEKVAEMLEDHGLHVAVYHAGLSTAARDAAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
Q+V AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y D
Sbjct: 278 QIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFGDI-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+ + ++ ++M Y E CRR+ +L FGE + C
Sbjct: 336 --VLLSK--------FAAESNQQEINLEKLNRMQQYAETDICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 185/324 (57%), Gaps = 6/324 (1%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K I E LD +LLYVTPE T F+ L+ +++ L + IDEAHCIS WGHD
Sbjct: 473 KKIIKELLDPAGCPYKLLYVTPERMKTQEFIDILEHLNNTSQLKRLVIDEAHCISEWGHD 532
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR YRKLS R P++PI+ALTATA PKV+ D+ + L + N + ++ SF R NL YEV
Sbjct: 533 FRKDYRKLSKFREMFPNIPIVALTATATPKVELDIKQQLSMHNTINIRGSFIRSNLKYEV 592
Query: 124 RYKDLLDD-AYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
R K + + D+ + N ++ IVYC C+ L YL+ G+S YHA LN
Sbjct: 593 RKKSTEPEFCFNDIYHFVNRNHKNSSGIVYCSTIAECESLCEYLTDRGLSVDFYHASLNA 652
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R + WI+ + ++V T+AFGMGID+ D R V H +IP S+E++YQ++GRAGRD
Sbjct: 653 AQRVDTQERWITGKFKIVCTTIAFGMGIDKPDTRFVIHHSIPSSIESYYQQTGRAGRDGK 712
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
S +LYY +D R+M I + +QS ++ + + + YC GS CRR
Sbjct: 713 LSDCILYYNKNDIRKMLKISTMGIV--AQSHEEYQKIMESKTENIDTVTSYCVGSECRRV 770
Query: 302 KILESFGEQIPVSLCKNSCDACKH 325
++E FGE+ CK CD C +
Sbjct: 771 SLMEYFGEE--TKPCKTMCDNCTY 792
>gi|393784306|ref|ZP_10372471.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392666082|gb|EIY59599.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 601
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 185/310 (59%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L ++ L+ +H L+L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLITEIDYL--LRDMH----LSLFAIDEAHCISQWGHDFRPEYAQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P V SSF+RPNL V+ + +
Sbjct: 158 VFPHIPIIALTATADKITREDIIRQLHLTDPKVFISSFDRPNLSLAVKRGYQQKEKSRTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + C I+YC+ R+ + ++ L GI C YHAGL+ + R + DD+I+ R
Sbjct: 218 LEFIDRHAGECGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSTQQRDATQDDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E + CRR+ +L FGE++ C
Sbjct: 336 --ILLTK--------FATESNQQSINLEKLQRMQQYAEANICRRRILLSYFGEKVEKD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 186/327 (56%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
++IY L P ++LLYVTPE + G MS L+ ++ R LL IDEAHC+S WGHD
Sbjct: 726 SRIYMQLSKKDPIIKLLYVTPEKVCSSGRLMSTLENLYQRQLLARFVIDEAHCVSQWGHD 785
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD++ L + P V SFNR NL Y+V
Sbjct: 786 FRQDYKRLNMLRKKFASVPMMALTATANPRVQKDILNQLEMLKPQVFSMSFNRHNLKYDV 845
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +++ L G+S AYHAGL D+
Sbjct: 846 LPKRPKSVALDCLQWIRKYHPYDSGIIYCLSRYECDSMASNLQKAGLSALAYHAGLPDET 905
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V WI+ Q++ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 906 RDIVQQKWINQDGCQIICATIAFGMGIDKPDVRFVIHASLPKSIEGYYQESGRAGRDGER 965
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 966 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVECRRI 1018
Query: 302 KILESFGEQ-IPVSLCKN----SCDAC 323
++L FGE CK SCD C
Sbjct: 1019 QLLAYFGETGFNPKFCKEYPEVSCDNC 1045
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 187/327 (57%), Gaps = 20/327 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L P + LLYVTPE + A+ + +H RGLL IDEAHCIS WGHDF
Sbjct: 398 RIYAALSETNPKINLLYVTPEKIAASEKLNNVFASLHRRGLLTRFVIDEAHCISQWGHDF 457
Query: 65 RPSYRKLSSLRN-YL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
RP Y KL SLR Y+ P VPI+ALTATA PK+ D + L + N + SSF R NL Y+
Sbjct: 458 RPDYTKLHSLRKVYINPRVPIMALTATATPKIATDARDHLSMPNSKLFISSFVRSNLKYD 517
Query: 123 VRYKDLLDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K + + + +KA IVYCL R C+ +S L GIS YHAGL D
Sbjct: 518 VIAKR--PKSLSAVMERMKALYPGKSGIVYCLSRKECETVSKSLQNQGISADVYHAGLPD 575
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R +V WI++ V+ AT+AFGMGID+ DVR V HF++PKS+E +YQE+GRAGRD L
Sbjct: 576 KQRQNVQAKWINNHINVICATIAFGMGIDKPDVRFVIHFSMPKSIEGYYQETGRAGRDGL 635
Query: 242 PSK-SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCR 299
S +LLY D R + I N + +S +++ Q+V YCE S CR
Sbjct: 636 TSYCALLYCYNDSIRARKMIEGDNSTVGVRSM---------HLNNLMQVVAYCENVSVCR 686
Query: 300 RKKILESFGEQIPVSLCKNS---CDAC 323
RK ++E FGE C+ S CD C
Sbjct: 687 RKVLVEHFGEVYDAEACRTSATPCDIC 713
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 19/326 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL++ P ++LLYVTPE ++++ F L +++ ++ IDEAHC+S WGHDFR
Sbjct: 771 IYRDLEAQPPMVKLLYVTPEKISSSARFQDTLDTLNANNYISRFVIDEAHCVSQWGHDFR 830
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L++ SSFNR NL Y+V
Sbjct: 831 PDYKKLGILKKRFPNVPTIALTATATPRVRLDILAQLNLKHCKWFLSSFNRSNLRYKVMP 890
Query: 126 K---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K LDD + S + I+YCL R CD+++ + G+ AYHAGL D
Sbjct: 891 KKGASTLDDISGYIRS---KPAHSSGIIYCLSRKECDDVAKKMCKDGVRAVAYHAGLTDN 947
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R + DW++ + +V+ AT+AFGMGID+ DVR V H+++PKS+E FYQE+GRAGRD
Sbjct: 948 ERETRQKDWLTGKLRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGFYQEAGRAGRDGEV 1007
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +LYY D R++ +L ++ + + K I + +++V YCE CRR
Sbjct: 1008 ADCILYYNYADMLRIKKMLDADK-------ALQYNVKKMHIDNLNRIVGYCENLMDCRRA 1060
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C + +CD C
Sbjct: 1061 QQLDYFGEHFTSEQCLENRQTACDNC 1086
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 192/310 (61%), Gaps = 7/310 (2%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F + L+ IH ++ + +DEAHC+S WGHDFRP YR+LS LR
Sbjct: 106 VKLLYVAPERLVSDSFTALLETIHQTVGISSIVVDEAHCVSEWGHDFRPDYRQLSRLRER 165
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P +P++ALTATA +V+ D+ E L L+ P V +SFNRPNL+YEV K + ++L
Sbjct: 166 FPTIPVIALTATATHRVRTDITEQLSLKKPFVHVASFNRPNLYYEVIEKSRGKVSLSELT 225
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + I+YC+ R ++L++ L+ GIS YHAGL+++ R+ +I Q
Sbjct: 226 GYIKET-EGSGIIYCMSRKQVEKLASELNENGISALPYHAGLSNETRTDHQTRFIRDDVQ 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGI++ DVR V H+++P+++E +YQESGRAGRD P++ L++ D ++
Sbjct: 285 IMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFFSPGDIKQA 344
Query: 258 E-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ FI +K + ++ +R +++ + Q+ Y + + CRR +L FGE + C
Sbjct: 345 DWFIQNKVHPETNEPLEDEQRIARQQL---RQIAAYADSTLCRRTTLLGYFGEVFGGN-C 400
Query: 317 KNSCDACKHP 326
CD C+ P
Sbjct: 401 -GQCDNCRFP 409
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 183/317 (57%), Gaps = 12/317 (3%)
Query: 12 DSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRK 70
++G + +LY+TPE L+ + + L+K+H R L + IDEAHC+S WGHDFRP Y++
Sbjct: 665 NAGGEGMEVLYITPEMLSKSQALIRALEKLHGRNRLARLVIDEAHCVSQWGHDFRPDYKE 724
Query: 71 LSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD 130
L +R P VP++ALTATA V+ DVM +L + + V SFNRPNL YEVR K D
Sbjct: 725 LGEVRARFPGVPVMALTATATENVKVDVMHNLKITDCEVFLQSFNRPNLTYEVRSKGKND 784
Query: 131 DAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVL 188
+ A + + ++ + C I+YCL R TC++ + L + AYHAG++ A++
Sbjct: 785 EVLASMAETISSSYRNQCGIIYCLSRKTCEKTAEDLRTKYRLKAQAYHAGMSATAKTEAQ 844
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+W R ++VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LY
Sbjct: 845 RNWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAGRDGKRSGCYLY 904
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESF 307
+G D ++ ++ Q ++ +V +CE S CRR ++L F
Sbjct: 905 FGYKDTATLKRMIDAGDGNGQQKGRQKQM--------LRNVVQFCENRSDCRRVQVLAYF 956
Query: 308 GEQIPVSLCKNSCDACK 324
E C N+CD CK
Sbjct: 957 AEYFRQEDCNNTCDNCK 973
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 200/356 (56%), Gaps = 41/356 (11%)
Query: 16 PSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
P ++LLY+TPE + A+ S L+ ++ R +L IDEAHC+S WGHDFRP Y+KL+ L
Sbjct: 104 PPVKLLYLTPEKIVASAKLNSVLENLYRRKMLARFIIDEAHCVSQWGHDFRPDYKKLNGL 163
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV---RYKDLLDD 131
R P VP++A+TATA P+V+KD++ L + +P SFNR NL YEV + K L D
Sbjct: 164 RERFPGVPMIAVTATATPRVRKDILHQLGMNSPKWFMQSFNRVNLKYEVLPKKPKSLTSD 223
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
+ S + IVYCL R CD +S L+ GI AYHAGL D RSSV W
Sbjct: 224 VINMIHSRF---SNQSGIVYCLSRRECDTVSTDLTKAGIQAKAYHAGLTDAQRSSVQQKW 280
Query: 192 ISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYG 250
++ +VV AT+AFGMGID+ DVR V H+++PKS+E +YQESGRAGRD + + +L+Y
Sbjct: 281 LNEDGCKVVCATIAFGMGIDKPDVRFVVHYSLPKSIEGYYQESGRAGRDGILATCVLFYS 340
Query: 251 MDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGE 309
D R+ R S+ + + +M++YCE CRR + + FGE
Sbjct: 341 YSDVSRLR----------------RMIESEVHLDNLFRMINYCENKADCRRSQQMSYFGE 384
Query: 310 --------QIPVSLCKN--------SCDACKHPNLLAKYLGELTSAVLQKNHFSQI 349
Q+P ++C N DA + ++ + + ++T+ Q+ F+ I
Sbjct: 385 ILDRRHCAQMPRAVCDNCSSTETFTEIDATEIAKVIVRGVRDVTATSTQRQRFTLI 440
>gi|350425370|ref|XP_003494100.1| PREDICTED: ATP-dependent DNA helicase Q5-like [Bombus impatiens]
Length = 1010
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 199/344 (57%), Gaps = 25/344 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I +DL S P ++LLYVTPE+ A F + + +++ L+ +DEAHC+S WGHDFRP
Sbjct: 99 IMKDLASNSPKIKLLYVTPEMGAQQHFQATITRLNKIKALSYFVVDEAHCLSQWGHDFRP 158
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
SYR+L + P++PI+ALTATAA +V+ D+++ L ++NP + RPNL+Y+V +
Sbjct: 159 SYRELGKFKKLCPNIPIIALTATAAKEVKDDILQCLNMKNPAIFSVPVFRPNLYYDVWFL 218
Query: 127 DLLDDAYADL------------CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
++LD + L S+ KA + C I+YC ++ + ++ LS+ GI A
Sbjct: 219 EILDKPFEHLRNFVIEALDSQDKSIPKAKKN-CGIIYCRKKEATEIIAHKLSSSGIPALA 277
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YHAGL ++ R+ V + W S ++ AT +FGMG+D+ VR V H+ +P+++ A+YQESG
Sbjct: 278 YHAGLKNQERNEVQNKWTSGEVPIIAATCSFGMGVDKGSVRFVVHWTVPQNIAAYYQESG 337
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--KKSISDFSQMVDY 292
RAGRD P+ +Y+ + + F++ + TR++S K + +F + V Y
Sbjct: 338 RAGRDGKPAFCRIYFSNKEYSAIAFLIKEE--------ITRKKSELVKLNWKNFEKTVSY 389
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
C + CR + FG+ P CK+ CD CK + + + + +
Sbjct: 390 CLEAKCRHAVFSKYFGDNPPP--CKDRCDVCKKKDAVQERISKF 431
>gi|327312566|ref|YP_004328003.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
gi|326944958|gb|AEA20843.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
Length = 727
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 178/308 (57%), Gaps = 15/308 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ L+ + ++ AIDEAHCIS WGHDFRP YRK+ + +
Sbjct: 114 KLLYVAPESLNKEENIAFLRSVK----ISFYAIDEAHCISEWGHDFRPEYRKIRHAIDAI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D++ SL +++ + KSSFNRPNL+YEVR K DD +
Sbjct: 170 GVAPVIALTATATDKVRTDIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTDRQIIK 229
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K + I+YCL R +EL+A L A I A YHAGL+ + RS DD++ V
Sbjct: 230 FIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHAGLDSETRSRTQDDFLMEELDV 289
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +++Y D ++E
Sbjct: 290 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGLCIVFYSKKDLNKLE 349
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + + Y E S CRRK +L FGE P C
Sbjct: 350 --------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLHYFGEDYPKDNC-G 398
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 399 MCDNCLHP 406
>gi|168029873|ref|XP_001767449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681345|gb|EDQ67773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 655
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 188/322 (58%), Gaps = 22/322 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY+ L+ G+ L++LYVTPE A + F+SKL+K + G L+L+AIDEAHC S WGHDFR
Sbjct: 166 IYKSLEKGEGDLKILYVTPEKVAKSKRFVSKLEKCNHGGRLSLIAIDEAHCCSQWGHDFR 225
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L L+ P VP++ALTATA +VQ D+ E L + S+ NRPNLFYEVR
Sbjct: 226 PDYKQLGILKKQFPRVPMIALTATATERVQTDLREMLQITRCEKFVSTVNRPNLFYEVRE 285
Query: 126 KDLLDDAYAD-LCSVL--KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K A D + S + K + IVYC R C++++A L GIS A YHA + +
Sbjct: 286 KKANGSAAIDDIASFILDKYSKKESGIVYCFSRKECEQVAAELRKRGISAAHYHADMKPE 345
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RSSV W +++ QV+V TVAFGMGI++ DVR V H ++ KS+E +YQESGRAGRD LP
Sbjct: 346 TRSSVHMRWSTNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRAGRDGLP 405
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ LLY+ D R ++S F + + + + +C+ CRR
Sbjct: 406 AHCLLYFRPADLPR----------QSSMVF-----AEMAGLHNLYAICRFCQSKQACRRA 450
Query: 302 KILESFGEQIPVSLCKNSCDAC 323
FGE+I C CD C
Sbjct: 451 AFFRHFGEKI--QKCNGMCDNC 470
>gi|150866421|ref|XP_001386017.2| ATP-dependent DNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149387677|gb|ABN67988.2| ATP-dependent DNA helicase, partial [Scheffersomyces stipitis CBS
6054]
Length = 1148
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 193/312 (61%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE T + K+ K++ L V IDEAHC+SSWGHDFRP Y+ + +
Sbjct: 564 LDLVYLSPEKANTSNVVQKIISKLYETNRLARVVIDEAHCLSSWGHDFRPDYQSMGLFKE 623
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VPI+ALTATA KV+ D++ +L ++N ++LK SFNR NL+YE+++K Y +
Sbjct: 624 RYPNVPIMALTATANEKVRLDIVHNLKMENAVLLKQSFNRTNLYYEIKWKAA---NYVEW 680
Query: 137 CS--VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+LK + I+YC + +C++ SA L++ G+ A YHAG++ + R + W +
Sbjct: 681 IKDYILKNQNNKTGIIYCHSKQSCEQTSAKLNSFGLHTAFYHAGMSPQDRFDIQSQWQTG 740
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R Q++ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD S +++Y D
Sbjct: 741 RIQLICATIAFGMGIDKPDVRYVIHLFIPRSLEGYYQETGRAGRDGKQSDCIMFYSYKDA 800
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ +++ T+E + ++ Q+V YCE + CRR+++L+ F E
Sbjct: 801 RSLQSMIQRDEEL------TKE-GKENHLAKLRQVVQYCENTTDCRRQQVLQYFNESFSP 853
Query: 314 SLCKNSCDACKH 325
+ C+ CD C++
Sbjct: 854 ADCRKQCDNCQN 865
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/328 (40%), Positives = 192/328 (58%), Gaps = 14/328 (4%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++Y L +LLYVTPE + A+ L++++ R LL IDEAHC+S WGHDF
Sbjct: 298 RVYASLHLATLRTKLLYVTPEKIAASDKLKGCLEQLYRRNLLQRFVIDEAHCVSQWGHDF 357
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR LS LR P VP++A+TATA P+V++D++ L ++N SFNR NL +EVR
Sbjct: 358 RPDYRNLSILRTNFPKVPMMAMTATATPRVREDILHQLKMKNTKWFIQSFNRTNLKFEVR 417
Query: 125 YKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K L ++ V+ + IVYCL R CD ++ LS G++ +AYHAG+ D
Sbjct: 418 PKK-LKSCTKEIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRAGLAASAYHAGMTDAQ 476
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R + + WI K ++V AT+AFGMGID+ DVR V H ++PKS+E +YQE+GR+GRD LP
Sbjct: 477 RRRIQEAWIQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRSGRDGLP 536
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRK 301
+ +LYY D R+ ++ + + S +F+ + + +MV YCE CRR+
Sbjct: 537 ATCILYYHWHDVVRLRKLI-QGDTPGSNAFANVQLHEEA----LFRMVSYCENQIDCRRR 591
Query: 302 KILESFGEQIPVSLCKN----SCDACKH 325
+IL FGE + C CD C+
Sbjct: 592 QILSHFGEAFDAADCGLVVGCMCDNCQQ 619
>gi|323343308|ref|ZP_08083535.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
gi|323095127|gb|EFZ37701.1| ATP-dependent helicase RecQ [Prevotella oralis ATCC 33269]
Length = 725
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 209/379 (55%), Gaps = 32/379 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + L+ ++ ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDVRNGRT--KLLYVAPESLNKEENVEFLRGVN----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + + P++ALTATA KV+ D+ +SLC+ KSSFNRPNL+YEVR
Sbjct: 157 PEYRNIRPTINKIGNAPVIALTATATDKVRTDIKKSLCITEAKEFKSSFNRPNLYYEVRQ 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D + +K + I+YCL R +EL+A L A I A YHAGL+ RS
Sbjct: 217 KS--NDIDRQVIKFIKQHPCKSGIIYCLSRKKVEELAAILLANEIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAQKDLQKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELT---SAVLQ-KNHFSQIFI-------SSQ 354
FGE+ C N CD C HP + LT SA++ K +F Q +I S+
Sbjct: 385 YFGEEYTKDNCHN-CDNCLHPKEKREAKDALTIVLSAIIAVKENFRQNYIVDFVKGRSTD 443
Query: 355 DMTD--GGQYSEFWNRDDE 371
D+ Q EF + +DE
Sbjct: 444 DIVSHKHDQLEEFGSGEDE 462
>gi|325855159|ref|ZP_08171782.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
gi|325483896|gb|EGC86840.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
Length = 727
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 178/308 (57%), Gaps = 15/308 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ L+ + ++ AIDEAHCIS WGHDFRP YRK+ + +
Sbjct: 114 KLLYVAPESLNKEENIAFLRSVK----ISFYAIDEAHCISEWGHDFRPEYRKIRHAIDAI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D++ SL +++ + KSSFNRPNL+YEVR K DD +
Sbjct: 170 GVAPVIALTATATDKVRTDIVRSLGIEDCVEFKSSFNRPNLYYEVRAKKSDDDTDRQIIK 229
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K + I+YCL R +EL+A L A I A YHAGL+ + RS DD++ V
Sbjct: 230 FIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHAGLDSETRSRTQDDFLMEELDV 289
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +++Y D ++E
Sbjct: 290 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGLCIVFYSKKDLNKLE 349
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + + Y E S CRRK +L FGE P C
Sbjct: 350 --------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLHYFGEDYPKDNC-G 398
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 399 MCDNCLHP 406
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 191/328 (58%), Gaps = 13/328 (3%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
Q K ++ D P + LLYVTPE+ + F + ++ +HS+G + IDEAHC+S
Sbjct: 916 QYKRQVMSAFDERSPEHFIELLYVTPEMVSKNVAFNNGMRTLHSKGKFARLVIDEAHCVS 975
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L +R P VP++ALTATA V D+ +L + N SFNRPN
Sbjct: 976 QWGHDFRPDYKTLGQVRQRYPGVPVMALTATATQNVIVDIRHNLGMDNCQTFCQSFNRPN 1035
Query: 119 LFYEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
L+YEVR K D + S++++ + IVY + R ++++ LS GI+ + YHA
Sbjct: 1036 LYYEVRPKTTNDKTIEAIASLVQSKYPNQSGIVYTISRKNAEKVAESLSQHGIAASHYHA 1095
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
++ + + V + W ++VVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAG
Sbjct: 1096 HVDPQEKVEVQNAWQRGEIKIVVATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAG 1155
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-S 296
RD PS +L+YG D R ++ +++ + Q ++ ++ +++ +C+ S
Sbjct: 1156 RDGKPSDCILFYGKQDIRVLKRLIADGDGSHEQ--------KERQMAMLNRVTAFCDNKS 1207
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACK 324
CRR +IL FGE+ + C +CD CK
Sbjct: 1208 DCRRAEILRYFGEEFTGAQCNKTCDNCK 1235
>gi|304383399|ref|ZP_07365865.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
gi|304335567|gb|EFM01831.1| ATP-dependent helicase RecQ [Prevotella marshii DSM 16973]
Length = 726
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 179/308 (58%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++S LK + ++ AIDEAHCIS WGHDFRP YR++ L N +
Sbjct: 115 KLLYVAPESLTKEEYVSFLKGVK----ISFYAIDEAHCISEWGHDFRPEYRRIRPLINEI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D+ ++L + + KSSFNRPNL+YEVR K D +
Sbjct: 171 GIAPVIALTATATDKVRTDIKKNLGIADAKEFKSSFNRPNLYYEVRAK--TQDIDKQIIK 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
++ + IVYCL R T +EL+A L A I A YHAGL+ RS D ++ R V
Sbjct: 229 FIRQHQGKSGIVYCLSRKTVEELAAVLCANDIKAAPYHAGLDSAKRSQTQDAFLMERIDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + +Y +D R++E
Sbjct: 289 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCITFYSNNDLRKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + + Y E S CRRK +L FGE + C N
Sbjct: 349 --------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLHYFGETYEKANCGN 398
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 399 -CDNCLHP 405
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 192/315 (60%), Gaps = 12/315 (3%)
Query: 13 SGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
S + ++RL+YVTPE + + + L +H R + +DEAHC+S WGHDFRP Y +L
Sbjct: 742 SSQSAVRLIYVTPEFIRQSNQAKTLLNDLHRRKRIARFVVDEAHCVSQWGHDFRPHYTEL 801
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
+LR+ P+VPI+ALTATA +V KDV E L +++ + L SFNRPNL Y+VR K +
Sbjct: 802 GALRDDYPNVPIMALTATANERVIKDVKEHLHMKDVIQLSQSFNRPNLEYQVRPKP-GNK 860
Query: 132 AYADLCS-VLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLD 189
++ S +L ++ D C I+YC R +C+ ++ LS GIS YHA L+ R+ V
Sbjct: 861 VLEEISSLILTSHKDQCGIIYCFSRESCETVAHDLSTKYGISAHHYHAKLSADDRAMVQQ 920
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
W ++ +V+VAT+AFGMGID+ DVR V H + PKS+E +YQE+GRAGRD S +LYY
Sbjct: 921 KWQQNKFRVIVATIAFGMGIDKPDVRFVIHHSAPKSLEGYYQETGRAGRDGKSSVCILYY 980
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG 308
D +M+ ++ K + K+ + + +++I + +C CRR ++L FG
Sbjct: 981 NYADINKMKSMIEKEEDKSPE-------AKERAIQSLDDIARFCNNKIECRRVQVLRYFG 1033
Query: 309 EQIPVSLCKNSCDAC 323
E ++C N+CD C
Sbjct: 1034 ETFSAAMCHNTCDNC 1048
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 188/325 (57%), Gaps = 18/325 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+ ++L KPS +LLYVTPE + F+ LK +H +G L +DEAHC+S WGHDFR
Sbjct: 284 VLQELRKDKPSCKLLYVTPERIAGNQSFVGILKCMHQKGQLAGFVVDEAHCVSQWGHDFR 343
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE--V 123
P YR L SL+ P VP++ALTATA V++D++ +L + + +VL+ SF+RPNL YE V
Sbjct: 344 PDYRGLGSLKQNFPRVPVMALTATATHPVREDILNALRIPHAIVLERSFDRPNLKYEVIV 403
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDK 182
+ K+ L L K+ C IVYCL ++ C ++S +L+ I A YHAGL +
Sbjct: 404 KTKEPLKQLGQLLMDRFKSQ---CGIVYCLSKSECVDVSKFLNEKCKIKAAYYHAGLAAR 460
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R +V W +V AT+AFGMGID+ DVR V H + KS+E++YQESGRAGRD LP
Sbjct: 461 QRVAVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTMSKSIESYYQESGRAGRDNLP 520
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRK 301
+ + Y D R+ ++ Q +SF T +KK M YCE CRR+
Sbjct: 521 AVCIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKK-------MQQYCELKDECRRQ 573
Query: 302 KILESFGEQIPVSLCK---NSCDAC 323
+LE FGE CK + CD C
Sbjct: 574 TLLEHFGESFDRKNCKYGSSPCDNC 598
>gi|352085481|ref|ZP_08953101.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 2APBS1]
gi|351681902|gb|EHA65016.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 2APBS1]
Length = 612
Score = 248 bits (633), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 184/309 (59%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE TP F+ L+ I + L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 111 LNLLYVAPERLLTPRFLGLLESIE----VALFAIDEAHCVSQWGHDFRPEYRELAILHQR 166
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P P +ALTATA P+ +++++E L LQ+ SSF+RPN+ Y V L +A L
Sbjct: 167 FPHAPRIALTATADPRTREEIVERLSLQHARQFVSSFDRPNIGYRV---GLRHNAKRQLT 223
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + IVYCL R D+ +A+L+ G+ YHAGL+ R+ ++
Sbjct: 224 EFLQGHQGESGIVYCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGV 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+++ + YG+ D M
Sbjct: 284 VMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTM 343
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E +GCRR+ +L +FGE P C
Sbjct: 344 SQMIAQSESADERKRVERQK--------LESLLAYAEATGCRRQLLLGAFGEVYP-GPCG 394
Query: 318 NSCDACKHP 326
+ CD C P
Sbjct: 395 H-CDNCLAP 402
>gi|408379129|ref|ZP_11176723.1| ATP-dependent DNA helicase RecQ [Agrobacterium albertimagni AOL15]
gi|407746613|gb|EKF58135.1| ATP-dependent DNA helicase RecQ [Agrobacterium albertimagni AOL15]
Length = 618
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 186/325 (57%), Gaps = 25/325 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I LD G+ L LYVTPE TATPGF+ ++ + + L AIDEAHC+S WGHDF
Sbjct: 111 VEIRRALDRGE--LDFLYVTPERTATPGFIEMMQGVE----IALFAIDEAHCVSQWGHDF 164
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR+L L + P VP LALTATA P ++D++ L L V +SF+RPN+ YE+
Sbjct: 165 RPEYRELGKLADLFPGVPRLALTATADPHTREDIIARLRLDEAQVFTTSFDRPNIAYEIV 224
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
+D L L + + IVYCL R +E++++L GI YHAG++ R
Sbjct: 225 ERD---QPRQQLLRFLSRHKGSSGIVYCLSRAKVEEIASWLDDQGIRALPYHAGMDRAIR 281
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ +VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS+
Sbjct: 282 DANQDAFLKEEDLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSE 341
Query: 245 SLLYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+ YGM D R RM ++ + ER+ + ++ CE GCRR+
Sbjct: 342 VWMAYGMADVIQRGRM-----IDEGGAADDIKRVERAK------LNALLAICETPGCRRQ 390
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
IL+ FGE P C N CD C P
Sbjct: 391 AILKHFGESHP-GQCGN-CDTCLKP 413
>gi|373461301|ref|ZP_09553043.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
gi|371952855|gb|EHO70688.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
Length = 725
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 182/321 (56%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDIRSGRT--KLLYVAPESLNKEESIDFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + D P++ALTATA KV+ D+ +SL + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRNIRPTINKIGDAPVIALTATATDKVRSDIKKSLAIIDAKEFKSSFNRPNLYYEVRQ 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D+ + ++ + I+YCL R +ELS L A I A YHAGL+ RS
Sbjct: 217 KS--DEVDKQIIKFIRQHEGKSGIIYCLSRKKVEELSEVLKANEIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y S CRRK +L
Sbjct: 335 IAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYATSSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C HP
Sbjct: 385 YFGEEYTQDNCHN-CDNCLHP 404
>gi|301096912|ref|XP_002897552.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
gi|262107012|gb|EEY65064.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
Length = 400
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 190/339 (56%), Gaps = 16/339 (4%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS 59
+ +K I +L PS++LLY+TPE + +P M LK +H +L IDEAHC+S
Sbjct: 67 LTLKRSITAELKRSAPSVKLLYLTPEKIIKSPEMMDLLKDLHRNKMLARFVIDEAHCVSQ 126
Query: 60 WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNL 119
WGHDFRP Y +L L+ P VP++ALTATA PKV V +SL + N V SFNR NL
Sbjct: 127 WGHDFRPEYNQLGLLKKTFPTVPLMALTATAPPKVIDHVKKSLLISNGHVFSMSFNRQNL 186
Query: 120 FYEVRYK------DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCA 173
+EVR K LD Y + D IVYC+ + C+ ++ YL G+S
Sbjct: 187 TFEVRDKPRGGDKKALDALYQLISKTYPP--DAVGIVYCMTKQDCENVANYLFDHGLSAD 244
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAG + R V + W + + +V AT+A+GMGI++ DVR V HF++ KS+E +YQE+
Sbjct: 245 FYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEA 304
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD PS+ +L+Y D +M ILS Q + +++ I M +YC
Sbjct: 305 GRAGRDGKPSQCILFYSPRDVSKMRNILSMPQKGMT------KKTRAVHIEKLRSMAEYC 358
Query: 294 E-GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
E + CRR+ ++ FG+Q S C +CD C+ A+
Sbjct: 359 EDDTTCRRQLLISYFGQQFQRSDCNQTCDNCRRTQRAAR 397
>gi|288803880|ref|ZP_06409305.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
gi|288333645|gb|EFC72095.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
Length = 727
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 182/321 (56%), Gaps = 17/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SG+ +LLYV PE M LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVRADIVSGRT--KLLYVAPESLNKEENMEFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRCAIETIGTAPVIALTATATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KKSDDDTNKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y D ++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 IVFYSKKDLNKLE--------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE P C CD C HP
Sbjct: 387 YFGEDYPKCNCA-MCDNCLHP 406
>gi|298675436|ref|YP_003727186.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
gi|298288424|gb|ADI74390.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
Length = 596
Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 181/307 (58%), Gaps = 17/307 (5%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
+LY+TPE + L+ ++ +NL AIDEAHCIS WG DFRP Y +L+ L+ P
Sbjct: 106 VLYITPERLTMSKTLDFLESVN----INLFAIDEAHCISEWGQDFRPEYLRLNMLKKKFP 161
Query: 80 DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 139
D+P++ALTATA P+VQ DV+ L L++ SSFNR NL+YEVR+K DAY +
Sbjct: 162 DIPLIALTATATPRVQNDVISLLELEDCRRYISSFNRDNLYYEVRHKK---DAYKQMVRY 218
Query: 140 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVV 199
LK + I+YC R ++L L G YHAGL K R + +I Q++
Sbjct: 219 LKTHRKYNGIIYCQSRRAVEDLYNKLKKEGFRVLPYHAGLPAKIREENQESFIRDDVQII 278
Query: 200 VATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEF 259
VAT+AFGMGI++ +VR V H+++PK++E +YQ++GR GRD L +L++ DR ++E+
Sbjct: 279 VATIAFGMGINKPNVRFVIHYDLPKNLENYYQQTGRGGRDGLDCDCILFFSYGDRYKIEY 338
Query: 260 ILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNS 319
+++ K+ + ++S + M+DYCE + CRRK +L FGE V C
Sbjct: 339 FINQKSRKSERDI---------ALSKLNMMIDYCESNVCRRKLLLNYFGEDFDVQNC-GK 388
Query: 320 CDACKHP 326
CD C P
Sbjct: 389 CDVCLEP 395
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 178/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + L+K++ L + IDEAHC+S WGHDFRP Y++L LRN
Sbjct: 731 IELLYITPEMINKSQAITRSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRN 790
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ V SFNRPNL YEVR K + A +
Sbjct: 791 QLPGVPMMALTATATENVKVDVIHNLKMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASI 850
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K + + IVYCL R TC+++++ L I YHAG++ R+ + DW +
Sbjct: 851 ADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAG 910
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 911 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDT 970
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+ +V YCE S CRR +IL F E
Sbjct: 971 STISSMIDKGEGSKQQKNRQRQM--------LHNVVQYCENRSDCRRVQILAYFNEYFRR 1022
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1023 QDCNASCDNCK 1033
>gi|338212508|ref|YP_004656563.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
gi|336306329|gb|AEI49431.1| ATP-dependent DNA helicase RecQ [Runella slithyformis DSM 19594]
Length = 746
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 190/316 (60%), Gaps = 19/316 (6%)
Query: 12 DSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
D+ +L+LLY+ PE + L+ R ++ VA+DEAHCIS WGHDFRP YR++
Sbjct: 109 DALDGTLKLLYIAPESLTKEENLDFLQ----RANISFVAVDEAHCISEWGHDFRPEYRRI 164
Query: 72 SSL-RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD 130
+ N PD+P++ALTATA PKVQ+D++++L ++ + K+SFNR NL+YE+R K L
Sbjct: 165 RGIIDNINPDLPLIALTATATPKVQQDIVKNLRMEEAAMFKTSFNRKNLYYEIRPK--LA 222
Query: 131 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDD 190
D L +K N I+YCL R T +E++ L+ + YHAGL+ R D
Sbjct: 223 DVNKQLIKYIKNNKGKSGIIYCLSRKTVEEVANLLNVNDVKALPYHAGLDSSTRMHNQDA 282
Query: 191 WISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYG 250
+++ V+VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L +++Y
Sbjct: 283 FLNEEADVIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNCVMFYC 342
Query: 251 MDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQ 310
+DD +++E K ++ S ER + + + ++MV Y CRR+++L FGE
Sbjct: 343 IDDIQKLE--------KFNKDKSVTERDNARHL--LNEMVAYANLGACRRRQLLSYFGEY 392
Query: 311 IPVSLCKNSCDACKHP 326
+ C CD C P
Sbjct: 393 MEKD-C-GFCDNCIKP 406
>gi|302345889|ref|YP_003814242.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
gi|302148973|gb|ADK95235.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
Length = 727
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 182/321 (56%), Gaps = 17/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SG+ +LLYV PE M LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVRADIVSGRT--KLLYVAPESLNKEENMEFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRCAIETIGTAPVIALTATATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KKSDDDTNKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y D ++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 VVFYSKKDLNKLE--------KFMEGKPVAEQDIGRQL--LQETEAYAESSVCRRKMLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE P C CD C HP
Sbjct: 387 YFGEDYPKCNCA-MCDNCLHP 406
>gi|336317637|ref|ZP_08572488.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
gi|335877984|gb|EGM75932.1| ATP-dependent DNA helicase RecQ [Rheinheimera sp. A13L]
Length = 599
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 188/311 (60%), Gaps = 22/311 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY+ PE FMS+L ++ ++L AIDEAHCIS WGHDFRP Y +L+ L++Y
Sbjct: 108 LKLLYLAPERLLQADFMSRLAEVG----VSLFAIDEAHCISQWGHDFRPHYTELAQLKHY 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P QKD+ L LQ P + SF+RPN+ Y V+ K +
Sbjct: 164 FPHVPMMALTATADPATQKDISRQLNLQQPYISVGSFDRPNIRYTVQEKF---RPLEQVV 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ LK I+YC R DEL+ L+ G AAYHAGL ++ R+SV + + + Q
Sbjct: 221 NYLKLQEQQSGIIYCASRRKVDELTEQLAGKGFQVAAYHAGLTNEQRNSVQEAFKKDQIQ 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
+++ATVAFGMG+++ ++R V HF +P+++EA+YQE+GRAGRD +P+++L+ D RM
Sbjct: 281 LIIATVAFGMGVNKSNIRFVIHFELPRTIEAYYQETGRAGRDGVPAEALMLVDPADIARM 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE--QIPVSL 315
+ K+++ NS++ +R F+QM + + CRR +L FGE Q P
Sbjct: 341 RSWIEKDEN-NSRTEVALQR--------FNQMAAFAQAQTCRRLVLLNYFGESSQKP--- 388
Query: 316 CKNSCDACKHP 326
C N CD C P
Sbjct: 389 CGN-CDICIDP 398
>gi|170593171|ref|XP_001901338.1| Bloom's syndrome protein homolog [Brugia malayi]
gi|158591405|gb|EDP30018.1| Bloom's syndrome protein homolog, putative [Brugia malayi]
Length = 1054
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 184/334 (55%), Gaps = 34/334 (10%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L+ P ++LLYVTPE + A+ + +H R LL +DEAHC+S WGHDF
Sbjct: 378 RIYSMLNESSPKIKLLYVTPEKIAASEKLNNMFFSLHRRDLLTRFVVDEAHCVSQWGHDF 437
Query: 65 RPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
RP Y KL SLR P VP++ALTATA PK+ D+ L +Q + SSF R NL Y+
Sbjct: 438 RPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDIRVHLAIQQSKLFISSFVRTNLKYD 497
Query: 123 V---------RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCA 173
V R D + Y D IVYCL R C+ +S L IS
Sbjct: 498 VIAKGPRSLVRVMDRMKILYPD----------KSGIVYCLSRRDCELVSKMLENHAISSE 547
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGL+DK R V WIS++ V+ AT+AFGMGID+ DVR V HF++PKS+EA+YQE+
Sbjct: 548 VYHAGLSDKKRLEVQTKWISNQVNVICATIAFGMGIDKPDVRFVIHFSMPKSIEAYYQET 607
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD L S + Y +D R+ ++ N+Q T +S Q+V YC
Sbjct: 608 GRAGRDGLNSYCAILYSYNDSVRIRKMIEG--ENNTQGVRTMHLNS------VLQIVAYC 659
Query: 294 EG-SGCRRKKILESFGEQIPVSLCKNS---CDAC 323
E S CRRK ++E FGE C+ S CD C
Sbjct: 660 ENVSICRRKLLVEHFGEVYDAEACRTSNSPCDVC 693
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 198/325 (60%), Gaps = 16/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L+ +P ++LLYVTPE + A+ + ++++R +L IDEAHC+S WGHDFR
Sbjct: 489 IYRKLNMPEPEIKLLYVTPEKVGASTSLRNIFSRLYNRNMLARFVIDEAHCVSQWGHDFR 548
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL LR P+V I+ALTATA P+V+ D++ L +++P SSFNR NL Y V+
Sbjct: 549 PDYKKLRELRENYPNVNIMALTATATPRVRIDILHQLKVKSPKWFLSSFNRSNLCYAVKE 608
Query: 126 KDLLDDAYADLCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D+ ++++ + DT I+YC R C++++ L GI YHAGLND
Sbjct: 609 KKG-KSTLKDIAALIQQEFSRDT-GIIYCFSRKECEDVARDLKVHGIGAIPYHAGLNDTE 666
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ + W++ + +VV AT+AFGMGID+ DVR V H+++PKS+E +YQESGRAGRD +
Sbjct: 667 RTKAQNLWMNGKVKVVCATIAFGMGIDKLDVRYVFHYSLPKSIEGYYQESGRAGRDGEKA 726
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKK 302
+LYY D+ RM +++ +QS ++ + + K I + ++V + E + CRR
Sbjct: 727 TCILYYSYRDKHRMLKLINMDQSMSNMA------AKKVHIDNLYRVVAFAENVTDCRRSL 780
Query: 303 ILESFGEQIPVSLC----KNSCDAC 323
L FGE+ +C + +CD C
Sbjct: 781 QLNYFGEKFDRKVCIENRETACDNC 805
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 187/310 (60%), Gaps = 13/310 (4%)
Query: 17 SLRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
S++++YVTPEL + F + L ++ RG L IDEAHC+S WGHDFRP Y++L ++
Sbjct: 262 SVKIVYVTPELLNKSTQFSNILHELDRRGRLCRFVIDEAHCVSQWGHDFRPDYKELGIIK 321
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
P +P++ALTATA KV+ DV+ SL ++ V + SFNRPNL Y V K + D
Sbjct: 322 RKFPRIPLIALTATATKKVELDVLNSLGIEGCKVFRQSFNRPNLKYYVMSK--TKKSLTD 379
Query: 136 LCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ S + ++ I+YC + C+E+S L+ + YHAGL+ + R+ V + W
Sbjct: 380 IVSFVHTYYPNSPGIIYCTSKKDCEEMSEKLNEH-LKTTFYHAGLSKRERNKVQEMWNDG 438
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+++VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L S +LYY D
Sbjct: 439 TIKIIVATIAFGMGIDKSDVRFVIHYSLPKSLEGYYQETGRAGRDGLESVCILYYNYGDT 498
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ +EF+++ N + S R+R K + V YCE + CRRK +L FGE
Sbjct: 499 KTIEFLIANNHNATSDQ-KNRQREELKYV------VQYCENKTDCRRKLVLSHFGENFDP 551
Query: 314 SLCKNSCDAC 323
+ C +CD C
Sbjct: 552 AECNKTCDNC 561
>gi|300728338|ref|ZP_07061703.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299774403|gb|EFI71030.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 726
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 183/321 (57%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKSDIRAGKT--KLLYVAPESLTKEDNVEFLKTVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + + + + P++ALTATA KV+ D+ SL + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIISQIGNAPVIALTATATDKVRTDIKRSLGIADAHEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D + +K + I+YCL R +EL+ L A I AAYHAGL+ RS
Sbjct: 217 K--TKDVDKQIIMFIKQHPGKSGIIYCLARKKVEELAEILKANDIKAAAYHAGLDSSTRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GR GRD K
Sbjct: 275 KTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRVGRDGGEGKC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAKKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD CKHP
Sbjct: 385 YFGEEYEQDNCGN-CDNCKHP 404
>gi|260949491|ref|XP_002619042.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
gi|238846614|gb|EEQ36078.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
Length = 1408
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 191/316 (60%), Gaps = 12/316 (3%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
+L SG+ L L+Y++PE+ + + + L K++ +L V +DEAHC+SSWGHDFRP Y
Sbjct: 761 ELTSGQ--LDLVYLSPEMVNSSNMIQRVLSKLYESNMLARVVVDEAHCVSSWGHDFRPDY 818
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
+ +S + P+VPI+ALTATA KV+ D++ L ++N ++LK SFNR NLFYEVR K
Sbjct: 819 QGMSLFKEKFPEVPIMALTATANEKVRLDIVHHLRMKNLVLLKQSFNRTNLFYEVRNKPP 878
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
+ + K G T I+YC + +C+ + L+ GI C YHAG++ R V
Sbjct: 879 NLYEWIRDYVMGKMAGKT-GIIYCHSKQSCETTAQKLNDWGIKCMYYHAGMDPNERFDVQ 937
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
W ++ Q++ AT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD S+ +++
Sbjct: 938 TQWQHNKIQLICATIAFGMGIDKPDVRFVIHMYIPKSLEGYYQETGRAGRDGKESECIMF 997
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESF 307
Y D R ++ ++ +++ + E + + +S Q+V YCE + CRRK++L F
Sbjct: 998 YSYKDARALQSLIQRDR-------NLEESARESHLSKLRQVVQYCENKTDCRRKQVLHFF 1050
Query: 308 GEQIPVSLCKNSCDAC 323
E + C CD C
Sbjct: 1051 NESFDPANCARKCDNC 1066
>gi|340618927|ref|YP_004737380.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
gi|339733724|emb|CAZ97101.1| ATP-dependent DNA helicase RecQ [Zobellia galactanivorans]
Length = 736
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 182/306 (59%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE ++ L+ + L+ +A+DEAHCIS WGHDFR
Sbjct: 109 QVKEDITNG--ITKLLYVAPESLTKEDYIDFLQSVK----LSFIAVDEAHCISEWGHDFR 162
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L ++ N L D +PI+ALTATA PKVQ+D++++L + + K+SFNRPNLFYEVR
Sbjct: 163 PEYRNLRTIVNRLDDDIPIIALTATATPKVQEDIIKNLGITDAQTYKASFNRPNLFYEVR 222
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ D+ +K N I+YCL R +EL+ L G+S YHAG + K R
Sbjct: 223 PKTANVDS--DIIRFVKKNAGKSGIIYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTR 280
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 281 SKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDDGEGH 340
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E +S N+ Q + ++V Y E S RRK +L
Sbjct: 341 CLAFYSYKDIEKLEKFMS-NKPVAEQEIGN---------ALLQEVVAYAETSMSRRKFML 390
Query: 305 ESFGEQ 310
FGE+
Sbjct: 391 HYFGEE 396
>gi|198276249|ref|ZP_03208780.1| hypothetical protein BACPLE_02441 [Bacteroides plebeius DSM 17135]
gi|198270691|gb|EDY94961.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 611
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 190/309 (61%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY++PE MS++ + ++L AIDEAHCIS WGHDFRP Y +L ++R Y
Sbjct: 108 VKLLYISPER-----LMSEMNYLLRDINISLFAIDEAHCISHWGHDFRPEYTQLKAIRQY 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L ++NP + SSF+RPNL EV+ + +
Sbjct: 163 FPNVPVVALTATADKITREDIIRQLEMRNPEIFISSFDRPNLSLEVKRGYQQKEKIKAIV 222
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + + I+YC+ R ++++ L G AAYHAG++++ R DD+I+ R Q
Sbjct: 223 KFLRRHRNESGIIYCMSRNGTEKVAQLLEKEGFDVAAYHAGMSNEQREITQDDFINDRVQ 282
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++ AT+AFGMGID+ +VR V H+N+PKS+E FYQE GRAGRD LPS++LL+Y D
Sbjct: 283 IICATIAFGMGIDKSNVRWVIHYNLPKSIENFYQEIGRAGRDGLPSETLLFYSFGDI--- 339
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+LS+ ++++Q E+ ++M Y E CRR+ +L FGE + C
Sbjct: 340 -ILLSRFAAESNQQGINLEK--------LNRMQQYAESDICRRRILLNYFGETMDHD-CG 389
Query: 318 NSCDACKHP 326
N CD CK+P
Sbjct: 390 N-CDVCKNP 397
>gi|449301478|gb|EMC97489.1| hypothetical protein BAUCODRAFT_68274 [Baudoinia compniacensis UAMH
10762]
Length = 481
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 138/355 (38%), Positives = 199/355 (56%), Gaps = 31/355 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K I +DL SG P +RLLYVTPE F L+ +H + L +AIDEAHCIS WGHD
Sbjct: 103 KNAILDDLKSGHPRIRLLYVTPEYCELDYFRKALRIVHEQCELARIAIDEAHCISEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS---SFNRPNLF 120
FRPS++KL + P VP++ TATA +V+ D++++L L + L L+S + +RPNL
Sbjct: 163 FRPSFKKLDFFKKEFPSVPMICCTATATQRVRDDIVDTLAL-DRLRLRSFTMTTHRPNLH 221
Query: 121 YEVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCD 159
YEVR+K+ +D Y D + LKA + I+Y L R +
Sbjct: 222 YEVRFKNDEEDHYHDFTNWLKACYNRRLNDPRRNLELTQRRERVTNVAGIIYTLFRKDTE 281
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
L+A L A GI YHAGL + + L W+++++ ++VAT AFGMGID+++VR V
Sbjct: 282 ALAARLCADGIGAKPYHAGLTTEQKDDHLAGWVANKEGYDIIVATTAFGMGIDKENVRFV 341
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKN--SQSFSTR 275
H+ IPKS E FYQE+GRAGRD + +LYY +DR R F+L + +N F+
Sbjct: 342 IHWQIPKSFEGFYQEAGRAGRDAKAACCILYYSREDRDRAAFLLGRENERNLSGPGFARG 401
Query: 276 ERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
+ +S + ++ YCE G CR + I + FG+ + C +CD K + L
Sbjct: 402 KEASVQRAKSLQALISYCENVGACRHQLIAQYFGD-TTLPKCDWACDWHKDADKL 455
>gi|94264239|ref|ZP_01288034.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
gi|93455350|gb|EAT05554.1| ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ
[delta proteobacterium MLMS-1]
Length = 605
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 183/309 (59%), Gaps = 18/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE F+ +L ++ L L AIDEAHCIS WGHDFRP Y KL LR
Sbjct: 107 LDLLYVAPERLLHSDFLGRLGQLK----LALFAIDEAHCISQWGHDFRPEYTKLGLLRQN 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P ++D++ L + + +SF+RPN+ Y VR K + L
Sbjct: 163 FPGVPLIALTATAEPHTRRDILARLQIADEAAFITSFDRPNIRYTVRDKK---RPFDQLL 219
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + + IVYCL R +E++A L+A G + AYHAGL + R + D ++
Sbjct: 220 AFVGSRPREAGIVYCLSRKRVEEVTARLNAAGFAARAYHAGLGAEEREAAQDAFLRDDTL 279
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGID+ ++R V H++IPK++E +YQE+GRAGRD LP+++LL +G D
Sbjct: 280 IIVATVAFGMGIDKSNIRYVVHYDIPKNIEGYYQETGRAGRDGLPAEALLLFGFGD---- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+++ NSQ+ R S K + MV + + SGCRR+ +L FGE P++
Sbjct: 336 -VAVARGLIDNSQNEERRRVESHK----LNAMVGFAQASGCRRRVLLGYFGE--PLNEDC 388
Query: 318 NSCDACKHP 326
+CD C P
Sbjct: 389 GNCDTCLEP 397
>gi|224133970|ref|XP_002327724.1| predicted protein [Populus trichocarpa]
gi|222836809|gb|EEE75202.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 118/181 (65%), Positives = 145/181 (80%), Gaps = 7/181 (3%)
Query: 216 LVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTR 275
+VCHFNIPKSME+FYQESGRAGRDQLPS+SLLYYG+DD ++MEFIL ++K QS S++
Sbjct: 1 MVCHFNIPKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILRNAENKKLQSSSSK 60
Query: 276 ERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGE 335
SKKS++DF+ M++YCEGSGCRRKKILESFGEQ+ +LCK SCDACKHPNL+AKYL E
Sbjct: 61 GELSKKSLTDFNLMIEYCEGSGCRRKKILESFGEQVSATLCKKSCDACKHPNLVAKYLEE 120
Query: 336 LTSAVL-QKNHFSQIFIS-SQDMTD-----GGQYSEFWNRDDEASGSEEDISDCDGNINL 388
LT+++ Q+N FS++F+S S DM D Q+SEFWNRDDE SEEDISD D +
Sbjct: 121 LTTSIARQRNGFSRVFMSRSTDMIDEEFRIDEQFSEFWNRDDEGKSSEEDISDFDDETEV 180
Query: 389 V 389
V
Sbjct: 181 V 181
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 186/317 (58%), Gaps = 21/317 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE +++ L+K ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKKDISSGLT--KLLYVAPESLTKEEYVTFLQKEK----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L DVPI+ LTATA PKVQ+D++++L + N K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLKNIIKLLGDVPIIGLTATATPKVQEDILKNLDMANANTFKASFNRPNLYYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K + I+YCL R + ++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNVESDIIRFIKQHKGKSGIIYCLSRKKVEAIAQVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFMSGKPVAEQEVGFAL-----------LQEVVAYAETSMSRRKFLL 384
Query: 305 ESFGEQIPVSLCKNSCD 321
FGE+ S + CD
Sbjct: 385 HYFGEEFD-SETGDGCD 400
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 792 IQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 851
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L + + V SFNRPNL YEVR K + A +
Sbjct: 852 KFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKGTNVVASI 911
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWISS 194
+K + I+YCL R +C+ ++ L I YHAGL R S+ DW
Sbjct: 912 AETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQRG 971
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 972 KYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYYGFQDT 1031
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + S+ ++S + + +V +CE + CRR ++L F E+
Sbjct: 1032 ASIRHMIDKGEG------SSEQKSRQHRM--LRHVVQFCENWTDCRRVQVLTYFNEKFKK 1083
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1084 ENCNRSCDNCK 1094
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 189/326 (57%), Gaps = 19/326 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 789 IYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 848
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V
Sbjct: 849 PDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLP 908
Query: 126 K---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K LDD + S I+YCL R CDE S + G+ AYHAGL D
Sbjct: 909 KKGASTLDDISRYIRS---KPAHFSGIIYCLSRKECDETSKRMCKDGVRAVAYHAGLTDT 965
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R DW++ + +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 966 EREGRQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDV 1025
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
+ +LYY D R++ ++ ++ + + K + + ++V YCE + CRR
Sbjct: 1026 ADCILYYNYADMLRIKKMMDSDK-------ALQYNVKKIHVDNLYRIVGYCENLTDCRRA 1078
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C + +CD C
Sbjct: 1079 QQLDYFGEHFTSEQCLANKETACDNC 1104
>gi|67605840|ref|XP_666710.1| DEAD/DEAH box helicase [Cryptosporidium hominis TU502]
gi|54657750|gb|EAL36476.1| DEAD/DEAH box helicase [Cryptosporidium hominis]
Length = 990
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 11/328 (3%)
Query: 11 LDSGKPSL--RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
L G P L+VTPE L + S LK+I+ L AIDEAHC+ WG DFRP
Sbjct: 327 LKKGDPETCPAFLFVTPEKLKHSKTLFSLLKQINDESRLLRFAIDEAHCVCQWGFDFRPD 386
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
Y +L LR P+VPI+ALTATA + DV++ L +++P + SF+RPNL YEVR K
Sbjct: 387 YIQLCKLREEFPNVPIIALTATATHSILSDVIKQLKMRSPTIFSLSFDRPNLKYEVRAKS 446
Query: 128 -LLDDAYADLCSVLKANG--DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
++C +L++ + +I+YCL R C+E+S L+ GIS YH + + R
Sbjct: 447 GSKKKMLNEICELLRSPRFCRSTSIIYCLSRNECEEVSKDLNKEGISATYYHGSMKEDKR 506
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ W++ KQV+VAT+AFGMGI++KDVRLV H ++PKS+E +YQESGRAGRD L SK
Sbjct: 507 NLAQRRWMNDEKQVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQESGRAGRDGLESK 566
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFST---RERSSKKSISDFSQMVDYCEGS-GCRR 300
+LYY D R++ + N K S+ + T ++K +I MV YCE CRR
Sbjct: 567 CILYYSYKDVSRLQTLAGVNIEKPSKKYYTSKNNSSNNKSTIDGLLGMVKYCEEQYKCRR 626
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNL 328
IL FGE CK CD C L
Sbjct: 627 TMILSHFGEDFK-GKCKVKCDNCMRSEL 653
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ G + L +HSR L + IDEAHC+S WGHDFRP Y++L + R
Sbjct: 792 IQLLYVTPEMVNKNGALLDILSHLHSRCKLARIVIDEAHCVSQWGHDFRPDYKELGNTRT 851
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +P++ALTATA V+ DV+ +L + + V SFNRPNL YEVR K + A +
Sbjct: 852 KFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKGTNVVASI 911
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWISS 194
+K + I+YCL R +C+ ++ L I YHAGL R S+ DW
Sbjct: 912 AETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISIQRDWQRG 971
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S LYYG D
Sbjct: 972 KYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYLYYGFQDT 1031
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + S+ ++S + + +V +CE + CRR ++L F E+
Sbjct: 1032 ASIRHMIDKGEG------SSEQKSRQHRM--LRHVVQFCENWTDCRRVQVLTYFNEKFKK 1083
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1084 ENCNRSCDNCK 1094
>gi|66475914|ref|XP_627773.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
gi|32399019|emb|CAD98259.1| DEAD/DEAH box helicase [Cryptosporidium parvum]
gi|46229189|gb|EAK90038.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
Length = 990
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 11/328 (3%)
Query: 11 LDSGKPSL--RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
L G P L+VTPE L + S LK+I+ L AIDEAHC+ WG DFRP
Sbjct: 327 LKKGDPETCPAFLFVTPEKLKHSKTLFSLLKQINDESRLLRFAIDEAHCVCQWGFDFRPD 386
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
Y +L LR P+VPI+ALTATA + DV++ L +++P + SF+RPNL YEVR K
Sbjct: 387 YIQLCKLREEFPNVPIIALTATATHSILSDVIKQLKMRSPAIFSLSFDRPNLKYEVRAKS 446
Query: 128 -LLDDAYADLCSVLKANG--DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
++C +L++ + +I+YCL R C+E+S L+ GIS YH + + R
Sbjct: 447 GSKKKMLNEICELLRSPRFCRSTSIIYCLSRNECEEVSKDLNKEGISATYYHGSMKEDKR 506
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ W++ KQV+VAT+AFGMGI++KDVRLV H ++PKS+E +YQESGRAGRD L SK
Sbjct: 507 NLAQRRWMNDEKQVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQESGRAGRDGLESK 566
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFST---RERSSKKSISDFSQMVDYCEGS-GCRR 300
+LYY D R++ + N K S+ + T ++K +I MV YCE CRR
Sbjct: 567 CILYYSYKDVSRLQTLAGVNIEKPSKKYYTSKNNSSNNKSTIDGLLGMVKYCEEQYKCRR 626
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNL 328
IL FGE CK CD C L
Sbjct: 627 TMILSHFGEDFK-GKCKVKCDNCMRSEL 653
>gi|150008998|ref|YP_001303741.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|255014829|ref|ZP_05286955.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_1_7]
gi|256841001|ref|ZP_05546508.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262383888|ref|ZP_06077024.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298375770|ref|ZP_06985726.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|301312048|ref|ZP_07217970.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|410102762|ref|ZP_11297687.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
gi|423330257|ref|ZP_17308041.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|423339397|ref|ZP_17317138.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|149937422|gb|ABR44119.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|256736844|gb|EEU50171.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262294786|gb|EEY82718.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298266807|gb|EFI08464.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|300830150|gb|EFK60798.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|409230778|gb|EKN23639.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|409231873|gb|EKN24721.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|409237889|gb|EKN30684.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
Length = 726
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 154/401 (38%), Positives = 221/401 (55%), Gaps = 36/401 (8%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QVK+ D+ SG+ +LLYV PE + L+++ ++ A+DEAHCIS WG
Sbjct: 103 QVKS----DILSGRT--KLLYVAPESLTKEENVDFLRQVK----ISFYAVDEAHCISEWG 152
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+Y
Sbjct: 153 HDFRPEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDATVFKSSFNRSNLYY 212
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K D ++ +KAN IVYCL R +E + L A GI YHAG++
Sbjct: 213 EVRPKGTNIDR--EIIKYIKANEGKSGIVYCLSRKKVEEFADILKANGIKALPYHAGMDS 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ RS+ D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 271 QVRSANQDAFLMEQADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+ + +Y D +++E K Q E+ K + + Y E S CRRK
Sbjct: 331 EGQCIAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRK 380
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDM 356
+L FGE+ C N CD C +P + EL SAVL+ K F +I ++
Sbjct: 381 VLLHYFGEEYLEDNCGN-CDNCLNPKKQVE-AKELLSAVLEVISTLKEKFKADYIV--NI 436
Query: 357 TDGGQYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
G + SE N + +E SG +ED + I +I+
Sbjct: 437 LVGNETSEIQNYKHNELEVFGSGQDEDDKTWNAVIRQALIA 477
>gi|312091032|ref|XP_003146836.1| RecQ helicase [Loa loa]
Length = 970
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 185/328 (56%), Gaps = 22/328 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L+ P ++LLYVTPE + A+ + +H RGLL +DEAHC+S WGHDF
Sbjct: 372 RIYGMLNENSPKIKLLYVTPEKIAASEKLNNVFHSLHRRGLLTRFVVDEAHCVSQWGHDF 431
Query: 65 RPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
RP Y KL SLR P VP++ALTATA PK+ D L +Q + SSF R NL Y+
Sbjct: 432 RPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDTRVHLAIQQSKLFISSFVRTNLKYD 491
Query: 123 VRYK---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V K LL D +L IVYCL R C+ ++ L + +S YHAGL
Sbjct: 492 VIAKGPRSLL--KVMDRMKILYPG--KSGIVYCLSRKDCESVAKMLESHSMSSEVYHAGL 547
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+DK R V WI++R V+ AT+AFGMGID+ DVR V HF+IPKS+E +YQE+GRAGRD
Sbjct: 548 SDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVRFVIHFSIPKSIEGYYQETGRAGRD 607
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
L S + Y +D R+ ++ N+Q T SS ++V YCE S C
Sbjct: 608 GLNSYCAILYSYNDSVRIRKMIEGEN--NTQGVRTMHLSS------VLEIVAYCENVSIC 659
Query: 299 RRKKILESFGEQIPVSLCKNS---CDAC 323
RRK ++E FGE C+ S CD C
Sbjct: 660 RRKWLVEHFGEVYDAEACRKSNSPCDIC 687
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ ++K L+K++ L + IDEAHC+S WGHDFRP Y++L LRN
Sbjct: 725 IELLYITPEMVNKSQAITKSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRN 784
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ V SFNRPNL YEVR K + A +
Sbjct: 785 QLPGVPMMALTATATENVKVDVIHNLRMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASI 844
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K + + IVYCL R TC+++++ L I YHAG++ R+ + DW +
Sbjct: 845 ADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAG 904
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 905 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDT 964
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+ +V YCE S CRR +I F E
Sbjct: 965 STISSMIDKGEGSKQQKNRQRQM--------LHNVVQYCENRSDCRRVQIFAYFNEYFRR 1016
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1017 QDCNASCDNCK 1027
>gi|374328402|ref|YP_005078586.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Pseudovibrio sp.
FO-BEG1]
gi|359341190|gb|AEV34564.1| DNA helicase, ATP-dependent, RecQ type, bacterial [Pseudovibrio sp.
FO-BEG1]
Length = 612
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 19/320 (5%)
Query: 8 YEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
Y DL +G+ L LLYV PE P F+ L++++ RGL+ L+AIDEAHCIS WGHDFRP
Sbjct: 110 YRDLRAGE--LDLLYVAPERLVRPEFVGLLEELNQRGLIALLAIDEAHCISQWGHDFRPE 167
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
YR+L+++R L VP LA+TATA +KD+ E L L P ++ S F+RPN+ Y V K
Sbjct: 168 YRELTNVRAKLEGVPCLAVTATADEPTRKDIQERLNL--PRLISSGFDRPNITYTVGIKH 225
Query: 128 LLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
+ L LK I+YCL R +E +A+L G YHAG ++ R +
Sbjct: 226 ---NPKQQLRRFLKERPAGESGIIYCLSRKKVEETAAWLVEEGFDALPYHAGFDNSVREA 282
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D +I ++VATVAFGMGID+ +VR V H ++PK++EA+YQE+GRAGRD LPS++
Sbjct: 283 NQDRFIKEEGLIMVATVAFGMGIDKPNVRFVAHLDLPKNIEAYYQETGRAGRDGLPSEAW 342
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
+ YGM D + ++ ++++ +Q R++ + YCE + CRR +L
Sbjct: 343 MIYGMQDVVLLNQMIDRSEAPENQKQIERQK--------LRSFLAYCETATCRRSVLLRY 394
Query: 307 FGEQIPVSLCKNSCDACKHP 326
FG++ C N CD C +P
Sbjct: 395 FGDE--CEPCGN-CDTCLNP 411
>gi|393911582|gb|EJD76373.1| CBR-HIM-6 protein [Loa loa]
Length = 1044
Score = 247 bits (630), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 142/328 (43%), Positives = 185/328 (56%), Gaps = 22/328 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+IY L+ P ++LLYVTPE + A+ + +H RGLL +DEAHC+S WGHDF
Sbjct: 372 RIYGMLNENSPKIKLLYVTPEKIAASEKLNNVFHSLHRRGLLTRFVVDEAHCVSQWGHDF 431
Query: 65 RPSYRKLSSLRNYL--PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
RP Y KL SLR P VP++ALTATA PK+ D L +Q + SSF R NL Y+
Sbjct: 432 RPDYTKLQSLRRMFTNPVVPVMALTATATPKIVTDTRVHLAIQQSKLFISSFVRTNLKYD 491
Query: 123 VRYK---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V K LL D +L IVYCL R C+ ++ L + +S YHAGL
Sbjct: 492 VIAKGPRSLL--KVMDRMKILYPG--KSGIVYCLSRKDCESVAKMLESHSMSSEVYHAGL 547
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+DK R V WI++R V+ AT+AFGMGID+ DVR V HF+IPKS+E +YQE+GRAGRD
Sbjct: 548 SDKKRLEVQTRWINNRVNVICATIAFGMGIDKPDVRFVIHFSIPKSIEGYYQETGRAGRD 607
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGC 298
L S + Y +D R+ ++ N+Q T SS ++V YCE S C
Sbjct: 608 GLNSYCAILYSYNDSVRIRKMIEGEN--NTQGVRTMHLSS------VLEIVAYCENVSIC 659
Query: 299 RRKKILESFGEQIPVSLCKNS---CDAC 323
RRK ++E FGE C+ S CD C
Sbjct: 660 RRKWLVEHFGEVYDAEACRKSNSPCDIC 687
>gi|224025973|ref|ZP_03644339.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
gi|224019209|gb|EEF77207.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
Length = 727
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 189/324 (58%), Gaps = 25/324 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATP--GFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++ D+ SGK +LLYV PE LT GF+ +K ++ A+DEAHCIS WGH
Sbjct: 103 QVKSDILSGKT--KLLYVAPESLTKEENVGFLKHVK-------ISFYAVDEAHCISEWGH 153
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP YR++ + N + P++ALTATA PKV+ D+ ++L + + + KSSFNRPNL+YE
Sbjct: 154 DFRPEYRRIRPIINEIGKAPVIALTATATPKVKMDIQKNLGMTDAVEFKSSFNRPNLYYE 213
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
VR K D D+ ++ N + I+YCL R +EL+ L A GI YHAG++
Sbjct: 214 VRAKTANVDR--DIIKFIRQNEEKSGIIYCLSRKKVEELAEVLQANGIKARPYHAGMDSA 271
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+ D ++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 272 TRSANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRAGRDGGE 331
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
+ + +Y D +++E K Q E+ K + + Y E S CRRK
Sbjct: 332 GQCITFYSNKDLQKLE--------KFMQGKPVSEQEIGKQL--LLETAAYAESSVCRRKI 381
Query: 303 ILESFGEQIPVSLCKNSCDACKHP 326
+L FGE+ C N CD C +P
Sbjct: 382 LLHYFGEEYTEDNCGN-CDNCLNP 404
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ ++K L+K++ L + IDEAHC+S WGHDFRP Y++L LRN
Sbjct: 813 IELLYITPEMVNKSQAITKSLEKLNRSRKLARIVIDEAHCVSQWGHDFRPDYKELGELRN 872
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ V SFNRPNL YEVR K + A +
Sbjct: 873 QLPGVPMMALTATATENVKVDVIHNLRMEGCEVFSQSFNRPNLTYEVRIKKKGTELLASI 932
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K + + IVYCL R TC+++++ L I YHAG++ R+ + DW +
Sbjct: 933 ADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSAERAKIQQDWQAG 992
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 993 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYCYKDT 1052
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+ +V YCE S CRR +I F E
Sbjct: 1053 STISSMIDKGEGSKQQKNRQRQM--------LHNVVQYCENRSDCRRVQIFAYFNEYFRR 1104
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1105 QDCNASCDNCK 1115
>gi|449453437|ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 188/329 (57%), Gaps = 28/329 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY++L+ G+ S+++LYVTPE ++ + FMSKL+K + G L+L+AIDEAHC S WGHDFR
Sbjct: 172 IYKNLEKGEGSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFR 231
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+ P++ALTATA +VQ D++E L + + S+ NRPNLFY VR
Sbjct: 232 PDYKNLGILKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVRE 291
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ I+YC R C++++ L GIS YHA ++
Sbjct: 292 KSSVSKVVIDQIAEFIQESYPNNES-GIIYCFSRKECEQVAKELRLRGISADHYHADMDS 350
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W +SR QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 351 VAREKVHMRWSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 410
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
PS+ LLYY D R ++ S + + +V YC+ CRR
Sbjct: 411 PSECLLYYRPGDVPRQSSMVFYENS---------------GLENLYGIVQYCQSRRQCRR 455
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNLL 329
F E + C+ P+ L
Sbjct: 456 SVFFRHFAEPL------KDCNGTSSPHFL 478
>gi|402495443|ref|ZP_10842169.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 702
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 185/308 (60%), Gaps = 23/308 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE +S+L+ I ++ L+L+AIDEAHCIS+WGHDFRP+Y +L L+N
Sbjct: 113 KLLYVAPE------SLSQLEGILNQVDLSLIAIDEAHCISAWGHDFRPAYTQLGYLKNRF 166
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P PI+ALTATA ++D+ + L L N + SSF+RPNL EVR D +
Sbjct: 167 PTTPIIALTATADKATREDISKQLNLNNATLHLSSFDRPNLSLEVRPG---IDRVKKILQ 223
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+ + + I+YCL R T + L+ L + G AYHAGL R V +++I+ + Q+
Sbjct: 224 FVDDHPNDSGIIYCLSRKTTESLAEKLESAGFKAKAYHAGLGHHIREQVQNEFINDQLQI 283
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
V ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD + SK++L++ D ++
Sbjct: 284 VCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGVASKTILFHSYADVVQL- 342
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
Q F+T +++ ++ +M Y + CRRK +L FGE IP C N
Sbjct: 343 -----------QQFATNSGNTEVQLAKLDRMQQYADALSCRRKVLLSYFGE-IPEKDCGN 390
Query: 319 SCDACKHP 326
CD CKHP
Sbjct: 391 -CDVCKHP 397
>gi|345885011|ref|ZP_08836404.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
gi|345042066|gb|EGW46174.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
Length = 727
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 183/321 (57%), Gaps = 17/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SG+ +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVRADIVSGRT--KLLYVAPESLNKEENVEFLKSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + P++ALTATA KV+ D++ SL +++ KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRCAIESIGTAPVIALTATATDKVRTDIVRSLGIEDCAEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DD + +K + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KKSDDDTNKQIIKFIKQHAGKSGIIYCLSRKKVEELAAILKANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 277 KAQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y D ++E K + E+ + + + Y E S CRRK +L
Sbjct: 337 IVFYSKKDLNKLE--------KFMEGKPIAEQDIGRQL--LQETEAYAESSVCRRKMLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE P C + CD C HP
Sbjct: 387 YFGEDYPKCNC-SMCDNCLHP 406
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 188/331 (56%), Gaps = 19/331 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
T IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 169 TSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHD 228
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 229 FRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILQPQVFSMSFNRHNLKYYV 288
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D A
Sbjct: 289 LPKKPKKVAFDCLEWIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSA 348
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHF----NIPKSMEAFYQESGRAGR 238
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGR
Sbjct: 349 RDEVQHKWVNQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVPKSVEGYYQESGRAGR 408
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SG 297
D S LL+Y D R++ ++ + N + T ++ MV YCE +
Sbjct: 409 DGETSHCLLFYTYHDVTRLKRLILMEKDGNHHTRETH-------FNNLYSMVHYCENITE 461
Query: 298 CRRKKILESFGEQ-IPVSLCKN----SCDAC 323
CRR ++L FGE CK SCD C
Sbjct: 462 CRRIQLLAYFGENGFNPDFCKKYPDVSCDNC 492
>gi|119355903|ref|YP_910547.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides DSM
266]
gi|119353252|gb|ABL64123.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides DSM
266]
Length = 619
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 180/302 (59%), Gaps = 17/302 (5%)
Query: 22 YVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDV 81
YV PE F LK+++ +++ IDEAHCIS WGHDFRP Y LS L PD+
Sbjct: 126 YVAPERFTLDQFQEMLKRVN----ISMAVIDEAHCISEWGHDFRPDYLSLSQLVTLFPDL 181
Query: 82 PILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLK 141
P+ A TATA +VQ+D+++ L L+NP V+++SF+R NL+Y++R+K ++A L ++LK
Sbjct: 182 PVAAFTATATHQVQRDILDKLALRNPFVVRASFDRANLYYDIRFK---ENASDQLVALLK 238
Query: 142 ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVA 201
N I+Y R + +E +A L A G YHAGL D R + +I V+VA
Sbjct: 239 QNSGKAGIIYRTSRKSVNETAALLKAKGFRVLPYHAGLGDDERKQNQEAFIRDEVDVIVA 298
Query: 202 TVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFIL 261
TVAFGMGID+ ++R V H ++PKS+E +YQE+GRAGRD ++ L + D ++ F +
Sbjct: 299 TVAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEAARCTLLFSQSDIPKVRFFI 358
Query: 262 SKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCD 321
Q + ++ +++ FS+++ + S CRRK +L+ FGE P C NSCD
Sbjct: 359 DAMQDETERA---------RALGAFSKVISFASTSVCRRKTLLDYFGETYPHDNC-NSCD 408
Query: 322 AC 323
C
Sbjct: 409 IC 410
>gi|282878161|ref|ZP_06286958.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
gi|281299739|gb|EFA92111.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
Length = 725
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/379 (38%), Positives = 204/379 (53%), Gaps = 32/379 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDVRSGRT--KLLYVAPESLNKEENIEFLKTVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + D P++ALTATA KV+ D+ SL + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRNIRPTINKIGDAPVIALTATATDKVRTDIKRSLGIADAREFKSSFNRPNLYYEVRQ 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D + ++ + I+YCL R +ELS L A I A YHAGL+ RS
Sbjct: 217 K--ASDIDRQIIMFIRQHEGKSGIIYCLSRKKVEELSEVLKANNIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 VAFYARKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAK----YLGELTSAVLQKNHFSQIFI-------SSQ 354
FGE C +SCD C HP + L L + V K F Q ++ S++
Sbjct: 385 YFGESYTQPNC-HSCDNCLHPKERREGKDALLIILKAIVALKEEFRQDYVVDFVMGQSTE 443
Query: 355 DMTD--GGQYSEFWNRDDE 371
D+T + EF + +DE
Sbjct: 444 DITSHKHDELEEFGSGEDE 462
>gi|218262311|ref|ZP_03476825.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
gi|218223462|gb|EEC96112.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
Length = 729
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + L++++ ++ A+DEAHCIS WGHDFR
Sbjct: 106 QVKDDIRSGRT--KLLYVAPESLTKDENVEFLRQVN----ISFYAVDEAHCISEWGHDFR 159
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 160 PEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEIRP 219
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K+N I+YCL R +E + L A GI YHAG++ + RS
Sbjct: 220 KTANIDR--EIIKYIKSNEGKSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRS 277
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 278 SNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 337
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 338 IAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLH 387
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL SAVL+ K F +I +M G
Sbjct: 388 YFGEEYLEENCGN-CDNCLNPKKKVE-AKELLSAVLEVIGTLKEKFKAEYIV--NMLVGN 443
Query: 361 QYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
+ SE + + +E SGS+E+ + I +I+
Sbjct: 444 ETSEIQSYKHNELEVFGSGSDEEEKTWNAVIRQALIA 480
>gi|124004539|ref|ZP_01689384.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123990111|gb|EAY29625.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 728
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 215/382 (56%), Gaps = 30/382 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ +D+ +G+ ++LLYV PE + LKK ++ VAIDEAHCIS WGHDF
Sbjct: 101 TRVKKDVLNGE--VKLLYVAPESLTKESNVDFLKKAQ----ISFVAIDEAHCISEWGHDF 154
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YRK+ + + L ++PI+ALTATA PKVQ+D+ +L +++ V KSSFNRPNL+YEVR
Sbjct: 155 RPEYRKIRQIIDNLGNLPIIALTATATPKVQQDIQRNLQMEDASVFKSSFNRPNLYYEVR 214
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + L LK I+YCL R +E+ +L I YHAGL+ R
Sbjct: 215 PKIHVK---KQLIKYLKNKKGESGIIYCLSRKKVEEIYEFLKVNDIKALPYHAGLDSSVR 271
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
D +++ ++VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L +
Sbjct: 272 MRNQDAFLNEDADIIVATIAFGMGIDKPDVRCVIHYDAPKSLEGYYQETGRAGRDGLNAD 331
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+++Y +D +++E K ++ ER + + + +M+DY CRR+++L
Sbjct: 332 CIMFYSPNDIQKLE--------KFNKDKPVTERDNARHL--LQEMMDYATSGVCRRRQLL 381
Query: 305 ESFGEQIPVSLCKN--------SCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDM 356
FGE++ N DA +H + + K + + T A +H S I + +
Sbjct: 382 HYFGEKMDKDGGFNDNTDQPTPKFDATEHVSWVLKAVAQ-TGARFHISHISDILMGKE-- 438
Query: 357 TDGGQYSEFWNRDDEASGSEED 378
TD + + D A GS +D
Sbjct: 439 TDYVKSYDHNKLDVFAKGSHKD 460
>gi|373111502|ref|ZP_09525757.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|423131855|ref|ZP_17119530.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|423135590|ref|ZP_17123236.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|423330145|ref|ZP_17307945.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
gi|371640169|gb|EHO05774.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|371640694|gb|EHO06290.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|371640856|gb|EHO06450.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|404602617|gb|EKB02313.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
Length = 731
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 181/306 (59%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ SG +LLYV PE ++S L+ L+ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKEDIKSG--ITKLLYVAPESLTKEEYVSFLQGEK----LSFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L D+PI+ LTATA PKVQ+D++++L + N K+SFNRPNLFYE+R
Sbjct: 158 PEYRNLRNIIRSLGDIPIIGLTATATPKVQEDILKNLEIPNANTFKASFNRPNLFYEIRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + D+ +K + ++YCL R +E++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNVETDIIRFIKQHQGKSGVIYCLSRKKVEEIANVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ ++ ++V Y E S RRK IL
Sbjct: 336 LAYYSYKDIEKLEKFMAGKPVAEQEIGYAL-----------LQEVVAYAETSMSRRKFIL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|126179385|ref|YP_001047350.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
gi|125862179|gb|ABN57368.1| ATP-dependent DNA helicase RecQ [Methanoculleus marisnigri JR1]
Length = 605
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 175/309 (56%), Gaps = 16/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+R+LYV+PE P F+S + K R L+AIDEAHCIS WGH+FRP YR+L L+
Sbjct: 107 IRILYVSPERAVQPFFLSLIAKADVR----LIAIDEAHCISMWGHNFRPEYRRLRVLKER 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P VQ D+ L L NP SFNR NL Y V K + L
Sbjct: 163 FPTVPVIALTATAIPAVQNDIAVELALSNPARFVGSFNRKNLTYRVVPKARY---FPRLV 219
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ L + + I+YC + EL+ L G S YHAGL D R+ + +
Sbjct: 220 AYLNEHKNDAGIIYCFSQKATVELAKKLQDKGFSALPYHAGLPDAVRAEHQEAFSRGDVA 279
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++ ATVAFGMGID+ DVR V H ++PK +E++YQE+GRAGRD P +LYY D +
Sbjct: 280 IICATVAFGMGIDKPDVRFVIHTDLPKDIESYYQETGRAGRDGEPGDCILYYSRGDYGTI 339
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+I+ K + +Q ++ + +K M+DYCE GCRRK +L FGE P C
Sbjct: 340 RYIIEKEGADATQ----KDVAYRK----VGAMLDYCETPGCRRKFLLAYFGESYPEERC- 390
Query: 318 NSCDACKHP 326
+CD C+ P
Sbjct: 391 GACDRCETP 399
>gi|317471202|ref|ZP_07930570.1| ATP-dependent DNA helicase RecQ [Anaerostipes sp. 3_2_56FAA]
gi|316901308|gb|EFV23254.1| ATP-dependent DNA helicase RecQ [Anaerostipes sp. 3_2_56FAA]
Length = 616
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 191/317 (60%), Gaps = 13/317 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGL-LNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++YV PE T GF L+ S G+ ++ +A+DEAHC+S WG DFRPSY K+ S
Sbjct: 108 KIIYVAPERLETEGF---LRFALSPGVDISFLAVDEAHCVSQWGQDFRPSYLKILSFLEK 164
Query: 78 LPDVPIL-ALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP P+L A TATA +V++DV++ L L++PLV+ + F+R NLF+ V+ D Y +L
Sbjct: 165 LPRRPVLGAYTATATVEVKEDVLDILNLRDPLVVTTGFDRANLFFGVKKPR---DKYREL 221
Query: 137 CSVLKANGD----TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
S L+ + + IVYCL R + +E+ L G S YHAGL+D R DD+I
Sbjct: 222 ESYLREKEEKMPGSSGIVYCLSRKSVEEVCYQLREAGFSVTRYHAGLSDTERRENQDDFI 281
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
R+Q++VAT AFGMGID+ DVR V H+N+PK+ME++YQE+GRAGRD P++ +LY+G
Sbjct: 282 YDRRQIMVATNAFGMGIDKPDVRFVIHYNMPKNMESYYQEAGRAGRDGEPAECILYFGAA 341
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D+R F++ + TR +K + QM YC S C R IL+ FGE+
Sbjct: 342 DQRTNRFLIEHGEDNQELDEETRRIVMEKDLGRLKQMTFYCATSSCLRHYILDYFGEESS 401
Query: 313 VSLCKNSCDACKHPNLL 329
C+N + + +LL
Sbjct: 402 AE-CQNCSNCLEEFDLL 417
>gi|330752412|emb|CBL87363.1| ATP-dependent DNA helicase RecQ [uncultured Flavobacteriia
bacterium]
Length = 739
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 175/292 (59%), Gaps = 17/292 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ LK ++ AIDEAHCIS WGHDFRP YR L + +
Sbjct: 124 KLLYVAPESLVKEENITFLKNTK----VSFFAIDEAHCISEWGHDFRPEYRNLRQVVKKI 179
Query: 79 PD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
D + I+ALTATA PKVQ D++++L + NP + K+SFNRPNLFYEVR K D+
Sbjct: 180 GDNISIIALTATATPKVQDDILKNLKMVNPEIFKASFNRPNLFYEVRQK--TSKVEYDIV 237
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
S +K+N I+YCL R +ELS +L I YHAGL+ K R D +++ +
Sbjct: 238 SFIKSNETKSGIIYCLSRKKVEELSQFLQVNEIRALPYHAGLDSKQRVKNQDSFLNEDCE 297
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD L +Y DD ++
Sbjct: 298 VIVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYDDIEKL 357
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
E +S + S +E S ++++ Y E SG RRK IL FGE
Sbjct: 358 EKFIS------GKPLSEKEVGQ----SLINEIIAYAETSGSRRKFILHYFGE 399
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 197/363 (54%), Gaps = 21/363 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I +L+S +LLYVTPE A + + L +H R LL + IDEAHC+S WGHDFR
Sbjct: 866 ILRELNSDYCKYKLLYVTPEKVARSDNLLRHLDNLHFRELLARIVIDEAHCVSQWGHDFR 925
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+ P+LALTATA V++DV+++L L N ++ + SFNRPNL Y V
Sbjct: 926 PDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLRYSVIP 985
Query: 126 KDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ ++ N D C IVYCL R C++++ L G CA YH ++ R
Sbjct: 986 K--TKKCLEDIDKFIRENHFDECGIVYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPVQR 1043
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+SV W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 1044 ASVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQHSS 1103
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS--------KKSISDFSQMVDYCEGS 296
+LYY D R++ +LS+ + S S RS+ + + + +MV YCE
Sbjct: 1104 CVLYYTYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYCEND 1163
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC--------KHPNLLAKYLGELTSAVLQKNHFS 347
CRR L FGE+ S C +CD C K +AK L EL Q+ S
Sbjct: 1164 VDCRRLLQLAHFGEKFNSSTCLKTCDNCLKITSFIEKDVTEIAKQLVELVKLTGQRFSSS 1223
Query: 348 QIF 350
I
Sbjct: 1224 HIL 1226
>gi|424842508|ref|ZP_18267133.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
gi|395320706|gb|EJF53627.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
Length = 737
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 198/335 (59%), Gaps = 28/335 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTA--TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++ +D+ SG + +LLY+ PE LT T F+S++K ++ VA+DEAHCIS WGH
Sbjct: 104 EVKQDIVSG--ATKLLYIAPETLTKEDTLRFLSQIK-------VSFVAVDEAHCISEWGH 154
Query: 63 DFRPSYRKLSSL-RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR++ S+ N ++PI+ALTATA PKV+ D++++L L+ P SFNR NLFY
Sbjct: 155 DFRPEYRRIRSMIENIEQEIPIIALTATATPKVRMDIVKTLRLEAPREFMDSFNRDNLFY 214
Query: 122 EVRYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
EV+ K +D + +K + I+Y R T +E++ LS I A YHAGL
Sbjct: 215 EVQPKGKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVNDIKAAPYHAGLE 274
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
K RS D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQETGRAGRDG 334
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
+ L +Y D R+E L + + RE ++ ++M+ Y E + CRR
Sbjct: 335 QHAHCLTFYSYKDILRLEKFL------RDKPVAEREMGAQL----LAEMIAYAETTACRR 384
Query: 301 KKILESFGEQIPVSLCKNS--CDACK--HPNLLAK 331
+ +L FGE+ +C+ CD CK HP AK
Sbjct: 385 RFLLHYFGEKYKDEVCRRDQMCDNCKKQHPTENAK 419
>gi|428773638|ref|YP_007165426.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
gi|428687917|gb|AFZ47777.1| ATP-dependent DNA helicase RecQ [Cyanobacterium stanieri PCC 7202]
Length = 713
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 200/324 (61%), Gaps = 17/324 (5%)
Query: 4 KTKIYE-DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+TKI + D+ +GK ++LLY+ PE + F L + + + AIDEAHCIS WGH
Sbjct: 94 QTKIRQRDILAGK--IKLLYLAPERLVSDTFQPFLVTLAQKIGIAAFAIDEAHCISEWGH 151
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFR YR++ LR P VPI ALTATA +VQ+D++E L L+NP + + SFNR NL+YE
Sbjct: 152 DFRQEYRQMRYLRQQFPQVPITALTATATVRVQRDIIEQLNLRNPQIHRFSFNRQNLYYE 211
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
V+ K+ AY L +++++ + IVYC+ R + +E++ L G+S YHAGL+DK
Sbjct: 212 VQEKE--RRAYNQLLHIIRSHQGS-GIVYCISRKSTEEIAERLVKDGVSALPYHAGLSDK 268
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS +I +++VATVAFGMGI++ DVRLV H+++P+++E++YQESGRAGRD
Sbjct: 269 VRSHYQTSFIRDDVRIMVATVAFGMGINKPDVRLVVHYDLPRNIESYYQESGRAGRDGEK 328
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
+ +L Y D++++ + + + T + K + + +++++Y + + CRR
Sbjct: 329 ANCILLYSRGDKQKIHYFIRQ---------KTNPQEQKIAYAQLAKVIEYADTNYCRRIP 379
Query: 303 ILESFGEQIPVSLCKNSCDACKHP 326
L FGE+ C N CD C +P
Sbjct: 380 QLSYFGEKFKGD-CGN-CDNCLNP 401
>gi|5281068|gb|AAD41441.1|U92536_1 RECQ helicase homolog [Drosophila melanogaster]
Length = 1487
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 190/324 (58%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 819 IYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 878
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V
Sbjct: 879 PDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLP 938
Query: 126 KDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + D+ +++ I+YCL R CDE S + G+ +YHAGL D R
Sbjct: 939 KKGVS-TLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDR 997
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S DW++ + +V+ ATVAFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 998 ESRQKDWLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVAD 1057
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D R++ +L ++ + + K + + ++V YCE + CRR +
Sbjct: 1058 CILYYNYSDMLRIKKMLDSDK-------ALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQ 1110
Query: 304 LESFGEQIPVSLC----KNSCDAC 323
L+ FG C + +CD C
Sbjct: 1111 LDYFGGHFTSEQCLENRETACDNC 1134
>gi|258647142|ref|ZP_05734611.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260853106|gb|EEX72975.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 726
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 185/323 (57%), Gaps = 23/323 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +GK +LLYV PE + L+ + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVKDDIRTGKT--KLLYVAPESLTKREQVEFLQSVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + + + PI+ALTATA KV+ D+ ++L + N KSSFNRPNL+YEVR
Sbjct: 157 PEYRKIRPIIDEIGRAPIIALTATATDKVRLDIKKNLGILNAKEFKSSFNRPNLYYEVRS 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ + + N I+YCL R +EL+ L A I AAYHAG++ + RS
Sbjct: 217 K--TKDIDKDIITYIHHNKGKSGIIYCLSRKKVEELAEVLRANNIKAAAYHAGMDPQTRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMESIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGVC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKI 303
L +Y DD +++E F + +++ I + Y E S CRRK +
Sbjct: 335 LAFYSPDDLKKLE------------KFMEGKPLAEQEIGRLLLKETAAYAESSVCRRKML 382
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C N CD C HP
Sbjct: 383 LHYFGEDYKKENCGN-CDNCLHP 404
>gi|373501519|ref|ZP_09591870.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
gi|371948172|gb|EHO66059.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
Length = 727
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 184/321 (57%), Gaps = 17/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SGK +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 RVKADISSGKT--KLLYVAPESLTKEENVEFLKTVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + + PI+ALTATA KV+ D+++SLC+ + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRFAIDEICKAPIIALTATATDKVRTDIIKSLCIDDCKEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D L ++ + I+YCL R +EL+A L A I A YHAGL+ + RS
Sbjct: 217 KRSDEDTNRQLIRFIRQHAGKSGIIYCLSRRKVEELAAVLQANDIKAAPYHAGLDSETRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR V H+NIPKS+E +YQE+GRAGRD
Sbjct: 277 KTQDGFLMEEIDVIVATIAFGMGIDKPDVRFVIHYNIPKSLEGYYQETGRAGRDGEEGIC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D ++++ K + E+ + + + Y E S CRR+ +L
Sbjct: 337 ITFYSQKDLKKLD--------KFMEGKPVAEQEIGRQL--LHETEAYAESSVCRRRLLLH 386
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE P C+ CD C HP
Sbjct: 387 YFGEIYPNPNCE-MCDNCLHP 406
>gi|157134860|ref|XP_001656478.1| werner syndrome helicase [Aedes aegypti]
gi|108881338|gb|EAT45563.1| AAEL003152-PA [Aedes aegypti]
Length = 968
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 189/315 (60%), Gaps = 16/315 (5%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ +GK R++Y+TPE L+++ ++ L L+AIDEAHC+S WGHDFRP+YR
Sbjct: 105 DIKAGK--FRVVYLTPEYVTGESGKYLLEQVANQ--LVLIAIDEAHCLSKWGHDFRPAYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
L +R + P VPILA+TATA P V+ D++ SL L NP VL + F+RPNL + V+ K L
Sbjct: 161 NLGVIRKWCPRVPILAVTATATPNVRDDIVTSLGLWNPQVLCTGFDRPNLQFHVKMKSSL 220
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+ D+ +L N + I+YCL R +E+ L + I C YHAGL K R V +
Sbjct: 221 G-IWEDVKGLLSRNVEGSIIIYCLTRKQTEEIVELLRSKKIDCEPYHAGLGLKQRREVHE 279
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
++ R Q++VAT+AFGMGID+ DVRLV H+ K +E++YQE+GRAGRD PSK ++++
Sbjct: 280 SFVRDRVQIIVATIAFGMGIDKPDVRLVVHYGASKDLESYYQEAGRAGRDGQPSKCVMFW 339
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESF-G 308
D + E + NQ ++ E SKK M +Y + CRR IL+ F G
Sbjct: 340 SRADFKTHEILREHNQGGVQKNL---EALSKK-------MYEYLDTRDCRRMFILKYFEG 389
Query: 309 EQIPVSLCKNSCDAC 323
+ + V KN CD C
Sbjct: 390 DVVKVDPRKNCCDNC 404
>gi|423343078|ref|ZP_17320792.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|409216754|gb|EKN09737.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 726
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + L++++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKDDIRSGRT--KLLYVAPESLTKDENVEFLRQVN----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 157 PEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEIRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K+N I+YCL R +E + L A GI YHAG++ + RS
Sbjct: 217 KTANIDR--EIIKYIKSNEGKSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 SNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 IAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL SAVL+ K F +I +M G
Sbjct: 385 YFGEEYLEENCGN-CDNCLNPKKKVE-AKELLSAVLEVIGTLKEKFKAEYIV--NMLVGN 440
Query: 361 QYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
+ SE + + +E SGS+E+ + I +I+
Sbjct: 441 ETSEIQSYKHNELEVFGSGSDEEEKTWNAVIRQALIA 477
>gi|307211690|gb|EFN87705.1| ATP-dependent DNA helicase Q5 [Harpegnathos saltator]
Length = 956
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 191/333 (57%), Gaps = 19/333 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
++ I +DL S P +RLLYVTPE+ A P F + + L+ IDEAHC+S WGHD
Sbjct: 95 RSMIMKDLMSNAPKIRLLYVTPEMGAQPHFQEIITHLRKAKALSYFVIDEAHCLSEWGHD 154
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYR+L + PD+P++ALTATAA +V+ D++++L +++PLV RPNLFY+V
Sbjct: 155 FRPSYRQLGVFKKLCPDIPVIALTATAAKQVKDDILQNLHMKDPLVFSQPVFRPNLFYDV 214
Query: 124 RYKDLLDDAYADLCS-VLKANGDT----------CAIVYCLERTTCDELSAYLSAGGISC 172
+ + LD + L + +L A G + C I+YC ++ + ++ LS GI+
Sbjct: 215 WFLETLDKPFVHLKNFILDALGPSDSSIPMDKRNCGIIYCRKKEATEIVAHKLSLSGIAT 274
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYH L + R+ V + W S V+ AT +FGMG+D+ VR V H+ +P+++ A+YQE
Sbjct: 275 LAYHGSLKAQERNEVQNKWTSGEVPVIAATCSFGMGVDKGPVRFVVHWTVPQNIAAYYQE 334
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD + +Y+ ++ + F++ + + + K ++F + V Y
Sbjct: 335 SGRAGRDGNSAFCRVYFSNEEFGPISFLIKEEIT------GKKTELVKIKWANFEKSVAY 388
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKH 325
C CR + FG+ P LCKN CD CK+
Sbjct: 389 CLEPKCRHAVFSKYFGDSPP--LCKNRCDVCKN 419
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 186/325 (57%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S ++ ++ R LL IDEAHC+S WGHDFR
Sbjct: 701 IYLQLSKKDPIIKLLYVTPEKVCASTRLISTMENLYERQLLARFVIDEAHCVSQWGHDFR 760
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++L+ LR VP++ALTATA P+V+KD++ L + P + SFNR NL YEV
Sbjct: 761 PDYKRLNVLRQKFQSVPMMALTATANPRVKKDILNQLKMTKPQIFTMSFNRDNLKYEVLP 820
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A + + K + + I+YCL R CD ++ L G++ AYHAGL D R
Sbjct: 821 KKPKRVALDCVEWIKKHHPNDSGIIYCLSRHECDTMADTLQKEGLAALAYHAGLADSNRD 880
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 881 YVQHKWINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSH 940
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D R+ ++ + NS + T ++ MV YCE CRR ++
Sbjct: 941 CLLFYSYHDVTRIRRLIQMEKDGNSHTKQTH-------FNNLYSMVHYCENVVECRRMQL 993
Query: 304 LESFGE-QIPVSLCKN----SCDAC 323
L FGE + CK +CD C
Sbjct: 994 LSYFGENNFNPNFCKEHTQVACDNC 1018
>gi|167381749|ref|XP_001735842.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902008|gb|EDR27948.1| hypothetical protein EDI_175610 [Entamoeba dispar SAW760]
Length = 765
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/316 (40%), Positives = 189/316 (59%), Gaps = 13/316 (4%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
D+++ K ++++YV PE ++ M++ +KK++ +GL + + IDEAHCIS WGHDFR SY
Sbjct: 442 DIETHKTKIKIVYVAPEFLSSSLKMNEVMKKLYDQGLFSYLVIDEAHCISQWGHDFRQSY 501
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
+L R P V + TATA +V+ D++ SL L+ +V +FNRPNL YE+R+K
Sbjct: 502 VELREFRKKFPSVQTIMFTATATERVKNDILLSLGLEEAIVFNQTFNRPNLRYEMRFK-- 559
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
L D+ ++ + + C IV+CL + C+ LS +L GI YHAGL+ K R V
Sbjct: 560 LPSVEFDIACYIQQHPNQCGIVFCLSKKDCENLSKFLVNYGIRATYYHAGLDPKRRKQVQ 619
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+DW++ VV ATVAFGMGID+ DVR V H +P S+E ++QE+GRAGRD PS ++Y
Sbjct: 620 NDWMNGIFLVVCATVAFGMGIDKPDVRFVIHQTMPSSIEQYFQEAGRAGRDGKPSDCIIY 679
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ +D R++++ +N +N + S ++SI + MV CE CRRK L F
Sbjct: 680 FNTNDIARVKWV-KRNMGENELT-----PSQEQSI---NAMVSLCETDECRRKIQLMYFD 730
Query: 309 EQIPVSLCKNSCDACK 324
E C CD C+
Sbjct: 731 ESFNEEKC-TGCDNCE 745
>gi|157110525|ref|XP_001651140.1| DNA helicase recq5 [Aedes aegypti]
gi|108878672|gb|EAT42897.1| AAEL005597-PA [Aedes aegypti]
Length = 846
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 196/342 (57%), Gaps = 16/342 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S + +R LY+TPE T F +K + + V +DEAHC+S WGHD
Sbjct: 332 RDRVLNDLKSIRTDIRFLYITPEQANTSTFKELMKMLVKHKKVAYVVVDEAHCVSEWGHD 391
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL LR+ P +P +ALTATA+ KV D+ ++L L+ P+ K+ R NL+Y+
Sbjct: 392 FRPDYLKLGYLRSEYPSIPWIALTATASKKVVDDIFKNLRLKEPIAKFKTPCFRKNLYYD 451
Query: 123 VRYKDLLDDAYADLCSVL-----------KANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
V +K+ + D Y L + K + C I+YC R T + ++ L+ G+
Sbjct: 452 VVFKNSIQDDYIHLRDYIESILDKDEKDIKPSKKACGIIYCRTRETTERVANSLTKLGLK 511
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AAYHAGL R +V +DW+ + + AT++FGMG+D+ VR V H++IP+S+ ++YQ
Sbjct: 512 TAAYHAGLKQSERVAVQEDWMDGKYAAISATISFGMGVDKGSVRFVIHWDIPQSVASYYQ 571
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVD 291
ESGRAGRD S +Y+ D + ++F+L ++ K S +E +K ++ +F ++V
Sbjct: 572 ESGRAGRDGKKSFCRVYHCRDQCKSIDFLLQQDLQKTKG--SAKEEKAKLAVKNFEKIVQ 629
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
YCE + CR + + FG+ P C N CD C +P + K +
Sbjct: 630 YCESANCRHRLFSDFFGDDPPD--CNNMCDVCSNPKKVEKAI 669
>gi|429753766|ref|ZP_19286544.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429171815|gb|EKY13407.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 729
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEANVFKSSFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 336 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|397779827|ref|YP_006544300.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396938329|emb|CCJ35584.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 780
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/323 (40%), Positives = 185/323 (57%), Gaps = 17/323 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K DL++G+ LRLLYV+PE P F++ L++ + LVA+DEAHCIS WGH F
Sbjct: 133 VKTLADLEAGR--LRLLYVSPERVVQPRFLAALRE----SGVTLVAVDEAHCISEWGHQF 186
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR+LS L+ P+VP++ALTATA P+V++D++ L L +P V S NR NL Y V
Sbjct: 187 RPEYRQLSVLKEQFPEVPMIALTATAIPEVRQDIIRQLSLADPAVYVGSSNRENLRYTVA 246
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K DAY L L++N + IVY + +E++ L G+ YHA L D R
Sbjct: 247 GKK---DAYPQLIDYLRSNPNRSGIVYFSSKKRTEEIAERLRNDGVRALPYHADLPDNYR 303
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V + +I VV AT AFGMGID+ DVR V H+++PKS+EA+ QE+GRAGRD S
Sbjct: 304 HRVQEQFIRDEIDVVCATNAFGMGIDKPDVRFVIHYDMPKSLEAYAQETGRAGRDGEASD 363
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+L+Y DRR+ + +L ++ + ++ + M +CE + CRR+ +L
Sbjct: 364 CILFYSPGDRRKNQVMLERDSLDRPDLYPV-------AVQKLNDMAAFCETTRCRREYLL 416
Query: 305 ESFGEQIPVSLCKNSCDACKHPN 327
FGE C CD C P+
Sbjct: 417 RYFGETFTGVPC-GGCDICLQPD 438
>gi|307175264|gb|EFN65310.1| ATP-dependent DNA helicase Q5 [Camponotus floridanus]
Length = 613
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 198/345 (57%), Gaps = 21/345 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ I EDL S P ++LLYVTPE+ A F + K+ + L+ IDEAHC+S WGHD
Sbjct: 96 RNTIMEDLMSNSPKIKLLYVTPEMGAQKHFQEIVTKLCKKKALSYFVIDEAHCLSEWGHD 155
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP+YR+L + + P +P++ALTATAA +V+ D+++SL +++ L+ RPNL+Y+V
Sbjct: 156 FRPTYRQLGTFKKLCPKIPMIALTATAAKQVKDDILQSLHMKDALIFSQPVFRPNLYYDV 215
Query: 124 RYKDLLDDAYADLCS-VLKANGDT----------CAIVYCLERTTCDELSAYLSAGGISC 172
+ + LD + L + +L A G + C I+YC ++ T + ++ L+ GI+
Sbjct: 216 WFLETLDKPFVHLKNFILDALGPSDNSIPMHKRNCGIIYCRKKETTEIVAHKLTLAGITT 275
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
AYH L + R+ V + W + V+ AT +FGMG+D+ VR V H+ +PK++ A+YQE
Sbjct: 276 LAYHGSLKAQERNEVQNKWTTGEVPVITATCSFGMGVDKGSVRFVIHWTVPKNIAAYYQE 335
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN-QSKNSQSFSTRERSSKKSISDFSQMVD 291
SGRAGRD P+ +Y+ ++ + F++ + KNS+ +K DF + V
Sbjct: 336 SGRAGRDGNPAFCRVYFSNEEYGPISFLIKEEIAHKNSE-------LAKIKWQDFEKSVA 388
Query: 292 YCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGEL 336
YC + CR + FG+ P C+N CD CK+ + + + E
Sbjct: 389 YCLETKCRHAVFSKYFGDSPPP--CRNRCDICKNKDEVQARIAEF 431
>gi|303236792|ref|ZP_07323371.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
gi|302482960|gb|EFL45976.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
Length = 750
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 180/319 (56%), Gaps = 21/319 (6%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SGK +LLYV PE + + + ++ AIDEAHCIS WGHDFRP YR
Sbjct: 130 DIHSGKT--KLLYVAPESLNKEDSIEFFRTVK----VSFYAIDEAHCISEWGHDFRPEYR 183
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
K+ + + PI+ALTATA KV+ D+++SL ++ KSSFNR NL+YEVR K
Sbjct: 184 KIRQAVDQIGKAPIIALTATATDKVRSDIVKSLGIEGCSEFKSSFNRANLYYEVRPKKNE 243
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+D + +K N I+YCL R +EL+A L A I YHAGL+ + RS D
Sbjct: 244 EDTNRQIIKFIKQNQGKSGIIYCLSRKKVEELAAVLQANEIKAEPYHAGLDSETRSKTQD 303
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
D++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD K +++Y
Sbjct: 304 DFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGEEGKCIVFY 363
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESF 307
SKN K + F + S++ I + Y E S CRRK +L F
Sbjct: 364 ------------SKNDLKKLEKFMEGKPVSEQDIGRQLLQETETYAESSVCRRKLLLHYF 411
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE+ C CD C HP
Sbjct: 412 GEEYLKDNC-GMCDNCLHP 429
>gi|427712781|ref|YP_007061405.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427376910|gb|AFY60862.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 732
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 194/326 (59%), Gaps = 10/326 (3%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+ + +I+ L+ ++LLYV PE + F + L IH + +DEAHC+S WG
Sbjct: 93 EARARIHSILNG---EVKLLYVAPERLVSDSFTALLANIHQTVGIASFVVDEAHCVSEWG 149
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+LS LR P +P++ALTATA V+ D+ E L L+ P + +SFNRPNL+Y
Sbjct: 150 HDFRPDYRQLSRLRELFPSIPMMALTATATHCVRADITEQLSLKQPFIHVASFNRPNLYY 209
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EV K + ++L +K + I+YC+ R ++L++ L+ GIS YHAGLN+
Sbjct: 210 EVIEKSRGKVSLSELTRYIKKT-EGSGIIYCMSRKNVEKLASELNENGISALPYHAGLNN 268
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+ +I Q++VATVAFGMGI++ DVR V H+++P+++E +YQESGR GRD
Sbjct: 269 DTRTDHQTRFIRDDVQIMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRGGRDGE 328
Query: 242 PSKSLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
P++ L++ D ++ + FI +K + ++ +R +++ + Q+ Y + + CRR
Sbjct: 329 PARCTLFFSPGDIKQADWFIQNKVHPETNEPLEDEQRIARQQL---RQIAAYADSTLCRR 385
Query: 301 KKILESFGEQIPVSLCKNSCDACKHP 326
+L FGE P + C CD C+ P
Sbjct: 386 TTLLGYFGEAFPGN-C-GQCDNCRFP 409
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 175/310 (56%), Gaps = 13/310 (4%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LLYV PE GF L + L +DEAHC+S WGHDFRP YR+LS +R
Sbjct: 109 NIKLLYVAPERLFNEGFQQLLTDVDQTIGLTGFVVDEAHCVSEWGHDFRPEYRQLSRIRR 168
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P P A TATA +V++D+++ L LQNP +SFNRPNL+YEV K + +Y L
Sbjct: 169 RYPRTPCQAFTATATQRVREDIIDQLALQNPSFHCTSFNRPNLYYEVLPK--VRKSYTQL 226
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ I+YC R DEL+ L G+ YHAGL D+ R+ + +I
Sbjct: 227 LCYVRQRRGQPGIIYCSSRKKVDELADRLKQDGVKALPYHAGLADRLRADYQEQFIRDDV 286
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
V+VATVAFGMGI++ DVR V H+++P ++E +YQESGRAGRD P+ L+Y D +R
Sbjct: 287 PVMVATVAFGMGINKPDVRFVVHYDLPTNLERYYQESGRAGRDGEPAHCTLFYRAGDIKR 346
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
E+ + + E+ + + +M+DY EG CRR L FGEQ P C
Sbjct: 347 AEYFIELKED---------EQEKRIAYQQLQKMIDYAEGIDCRRTIQLSYFGEQFPGD-C 396
Query: 317 KNSCDACKHP 326
CD C++P
Sbjct: 397 -GGCDNCQNP 405
>gi|260062261|ref|YP_003195341.1| ATP-dependent DNA helicase [Robiginitalea biformata HTCC2501]
gi|88783823|gb|EAR14994.1| putative ATP-dependent DNA helicase [Robiginitalea biformata
HTCC2501]
Length = 733
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 182/307 (59%), Gaps = 23/307 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ED+ SG +LLYV PE ++ L+ + L+ VAIDEAHCIS WGHDFRP
Sbjct: 105 VKEDITSG--VTKLLYVAPESLTKEEYVDFLQGV----TLSFVAIDEAHCISEWGHDFRP 158
Query: 67 SYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
YR L S+ + L D +PI+ALTATA PKVQ+D++++L + V K+SFNRPNL+YEV+
Sbjct: 159 EYRNLRSIIDRLGDDIPIIALTATATPKVQEDILKNLGIPEAEVFKASFNRPNLYYEVQP 218
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + AD+ +K N I+YCL R +EL+ L G+S YHAG + K RS
Sbjct: 219 K--TKNVDADIIRFVKKNAGKSGIIYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRS 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 277 RYQDMFLMEEVDVVVATIAFGMGIDKPDVRYVIHHDIPKSIESYYQETGRAGRDGGEGHC 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKI 303
L +Y D ++E F + +++ I + ++V Y E S RRK I
Sbjct: 337 LAFYSYKDVEKLE------------KFMAGKPVAEQEIGNALLQEIVAYAETSVSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 188/325 (57%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 751 IYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFR 810
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y++++ LR P VP++ALTATA P+VQKD++ L + P V SFNR NL Y V
Sbjct: 811 QDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKIVRPQVFSMSFNRHNLKYYVLP 870
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 871 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARD 930
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 931 EVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISH 990
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+L+Y D R++ ++ + N + T ++ MV YCE + CRR ++
Sbjct: 991 CVLFYTYHDVTRLKRLILMEKDGNQHTRETH-------FNNLYSMVHYCENITECRRIQL 1043
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE + CK SCD C
Sbjct: 1044 LAYFGENGFNPNFCKKYSDVSCDNC 1068
>gi|389795781|ref|ZP_10198890.1| ATP-dependent DNA helicase RecQ [Rhodanobacter fulvus Jip2]
gi|388430112|gb|EIL87306.1| ATP-dependent DNA helicase RecQ [Rhodanobacter fulvus Jip2]
Length = 605
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/323 (39%), Positives = 193/323 (59%), Gaps = 19/323 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ L++G+ L LLYV PE T F+++L++ + L AIDEAHC+S WGHD
Sbjct: 96 QREVERQLEAGE--LNLLYVAPERLLTGRFLAQLERTE----VALFAIDEAHCVSQWGHD 149
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR+L+ L+ P VP +ALTATA P+ +++++E L LQN SSF+RPN+ Y V
Sbjct: 150 FRPEYRELAILQERFPQVPRIALTATADPRTREEIVERLSLQNARQFVSSFDRPNIGYRV 209
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
L +A L L + IVYCL R D+ +A+L+ G+ YHAGL+
Sbjct: 210 ---GLRHNAKRQLGEFLLGHQGESGIVYCLSRRKVDDTAAWLAESGVEALPYHAGLDAAT 266
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ ++ V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+
Sbjct: 267 RAKNQKRFLREDGVVMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPA 326
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
++ + YG+ D M ++++++S + + R++ ++ Y E + CRR+ +
Sbjct: 327 EAWMIYGLSDVVTMSQMIAQSESADERKRVERQK--------LESLLAYAEATDCRRQLL 378
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L +FGE P C + CD C P
Sbjct: 379 LGAFGESYP-GPCGH-CDNCIAP 399
>gi|255725388|ref|XP_002547623.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
gi|240135514|gb|EER35068.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
Length = 1227
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 207/361 (57%), Gaps = 21/361 (5%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE G K+ +++ L V IDEAHC+SSWGHDFRP Y+ L +
Sbjct: 718 LDIVYLSPEKANRSGHTQKIIARLYKNDQLARVVIDEAHCLSSWGHDFRPDYQGLKFFKE 777
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK--DLLDDAYA 134
P+VPI+ALTATA KV++D++ +L +++P+ LK SFNR NLFYE+R K D L +
Sbjct: 778 EFPNVPIMALTATANEKVREDILHNLNMKDPIFLKQSFNRTNLFYEIRLKQRDFLKEIKD 837
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+++ + + I+YC + +C++ SA L+ G+ + YHAG++ + R + +W ++
Sbjct: 838 ---YIMEKHPNQTGIIYCHSKQSCEQTSAKLNEYGLRTSFYHAGMSTEDRYKIQTNWQNN 894
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ QV+ AT+AFGMGID+ DVR V H +P+S+E +YQE+GRAGRD S+ ++YY D
Sbjct: 895 KIQVICATIAFGMGIDKPDVRFVIHLFLPRSLEGYYQETGRAGRDGKHSECIMYYSPKDA 954
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPV 313
R + ++ + + FS E + + Q+V YCE + CRR+++L+ F E
Sbjct: 955 RTLRTLI-----QGDEQFS--EDVKEGHLEKLRQVVQYCENTIDCRRQQVLQYFNESFNP 1007
Query: 314 SLCKNSCDACKHPNL-------LAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQYSEFW 366
+ C CD C + N +Y ++ S V I QD+ G +Y +
Sbjct: 1008 ADCNKECDNCLNFNQGEIVERDCTEYARDIISLVKSIQRDKVTVIHCQDVFRGMKYKKIV 1067
Query: 367 N 367
N
Sbjct: 1068 N 1068
>gi|189462633|ref|ZP_03011418.1| hypothetical protein BACCOP_03325 [Bacteroides coprocola DSM 17136]
gi|189430794|gb|EDU99778.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 607
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 186/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L F+ K +I +L AIDEAHCIS WGHDFRP Y +L LR
Sbjct: 105 VKLLYISPERLMGEVNFLMKDIRI------SLFAIDEAHCISQWGHDFRPEYTQLKILRQ 158
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PDVP++ALTATA ++D++ L +++P + SSF+RPNL +V+ + +
Sbjct: 159 QFPDVPVVALTATADKITRQDIIRQLAMKDPQIFISSFDRPNLSLDVKRGFQQKEKMRTI 218
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ ++++ L GI+ A YHAGL+ AR + DD+I+ R
Sbjct: 219 FDFIARHRGESGIIYCMSRSKTEKVAEMLEEHGIATAVYHAGLSTAAREAAQDDFINDRV 278
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y D
Sbjct: 279 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFGDI-- 336
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LSK F+ + ++ ++M Y E CRR+ +L FGE + C
Sbjct: 337 --VLLSK--------FAAESNQQEINMEKLNRMQQYAETDICRRRILLNYFGETMDHD-C 385
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 386 GN-CDVCRNP 394
>gi|381188984|ref|ZP_09896542.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379649120|gb|EIA07697.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 704
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 184/309 (59%), Gaps = 23/309 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++L+YV PE +S L+ + S+ L+L+AIDEAHCISSWGHDFRP+Y L L+
Sbjct: 110 VKLVYVAPE------SLSYLENVFSQITLSLIAIDEAHCISSWGHDFRPAYTNLGYLKKR 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P PILALTATA +KD+ + L L+ P SSF+R NL EVR D +
Sbjct: 164 FPSTPILALTATADKATRKDISKQLNLKEPKSFISSFDRKNLSLEVRPAL---DRVKQIV 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ A IVYCL R T +EL+ L GI+ AYHAGL+ RS DD+I+ Q
Sbjct: 221 DFISAKPRESGIVYCLSRKTTEELAEKLQKAGINAKAYHAGLDSTVRSKTQDDFINDDCQ 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PK++E +YQE GRAGRD LPS+++L+ D ++
Sbjct: 281 VVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLPSETILFESYGDVIQL 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
Q F+++ +++ ++ +M Y + CRRK +L FGE + + C
Sbjct: 341 ------------QKFASQGLNAEVQLAKLERMKQYADALSCRRKILLSYFGELVTEN-CG 387
Query: 318 NSCDACKHP 326
N CD CK+P
Sbjct: 388 N-CDICKNP 395
>gi|427733629|ref|YP_007053173.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
gi|427368670|gb|AFY52626.1| ATP-dependent DNA helicase RecQ [Rivularia sp. PCC 7116]
Length = 719
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/293 (41%), Positives = 183/293 (62%), Gaps = 12/293 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + F+ L +H + ++ AIDEAHC+S WGHDFRP YR++ SLR
Sbjct: 110 VKLLYVAPERLLSERFLPLLDLVHHQIGISAFAIDEAHCVSEWGHDFRPEYRQMISLRQR 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VPI ALTATA +V+ D+++ L L+ P V +SFNR NL+YEVR K ++Y +L
Sbjct: 170 YPNVPIWALTATATERVRLDIIKQLGLKQPNVHIASFNRQNLYYEVRPKK--KNSYVELL 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+++ N + I+YCL R +EL+ L IS YHAGL+D RS +I +
Sbjct: 228 GLIQDN-EGSGIIYCLTRKKVEELAFKLQHDKISALPYHAGLSDVERSENQTKFIRDDAR 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGI++ DVR V H++I +++E++YQESGRAGRD S+ +L+ D + +
Sbjct: 287 IIVATIAFGMGINKPDVRFVVHYDISRNLESYYQESGRAGRDGESSRCMLFLSYSDVKTI 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQ 310
E+++ + ++ Q + + QM+DY EG+ CRR L FGE+
Sbjct: 347 EWLIDQKSNEQEQMIAKHQ---------LRQMIDYAEGTDCRRAIQLSYFGER 390
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/343 (40%), Positives = 190/343 (55%), Gaps = 14/343 (4%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
S + + LLY+TPE+ ++K L K++ L + IDEAHC+S WGHDFRP Y++L
Sbjct: 809 SAEEDIELLYITPEMVNKSQAITKSLDKLNCSRKLARIVIDEAHCVSQWGHDFRPDYKEL 868
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
LRN LP VP++ALTATA V+ DV+ +L ++ V SFNRPNL YEVR K +
Sbjct: 869 GELRNQLPGVPMMALTATATENVKVDVIHNLKMEGCEVFSQSFNRPNLTYEVRIKKKGTE 928
Query: 132 AYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLD 189
A + +K + + IVYCL R TC+++++ L I YHAG++ R+ +
Sbjct: 929 VLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHAGMDSGERAKIQQ 988
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
W + R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY
Sbjct: 989 AWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYY 1048
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFG 308
D + ++ K + Q R+ +V YCE S CRR +IL F
Sbjct: 1049 CYKDTSTISSMIDKGEGSKQQKNRQRQM--------LHNVVQYCENRSDCRRVQILAYFN 1100
Query: 309 EQIPVSLCKNSCDACKHPNL--LAKYLGELTSAVLQKNHFSQI 349
E C SCD CK ++ L + SA+ HF I
Sbjct: 1101 EYFRRQDCNASCDNCKSDSVFELHDFSQYAASAIKVVRHFQSI 1143
>gi|330907668|ref|XP_003295890.1| hypothetical protein PTT_03629 [Pyrenophora teres f. teres 0-1]
gi|311332395|gb|EFQ96010.1| hypothetical protein PTT_03629 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 199/358 (55%), Gaps = 32/358 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I DL G P RLLYVTPE F L+ I+S+ L +A+DEAHC+S WGHD
Sbjct: 103 RNRILADLQCGHPLTRLLYVTPEFCQGDNFRKILRVIYSQRELARIAVDEAHCVSEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL--QNPLVLKSSFNRPNLFY 121
FRPS+++LS + PDVP++ LTATA +V+ D++++L L +N + + S +RPNL Y
Sbjct: 163 FRPSFQQLSFFKTEFPDVPVICLTATATARVRDDIIKTLALDPKNLKMFRMSTSRPNLHY 222
Query: 122 EVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCDE 160
EVR+K D Y + S LK+ + + I+Y + R C+
Sbjct: 223 EVRFKSDDQDHYDNFISWLKSTHARRAADPERASQLSTQKQRSDNVPGIIYTIFRKDCES 282
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVC 218
L+A L A GI YHAGL+ R+ L W++++ VVVAT AFGMGID+++VR V
Sbjct: 283 LAARLRADGIGAKPYHAGLSVSERADALSGWVANKAGYDVVVATTAFGMGIDKENVRFVV 342
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN---QSKNSQSFSTR 275
H+ IPKS E FYQE+GRAGRD S +LYYG +DR R +++++ Q +
Sbjct: 343 HWQIPKSFEGFYQEAGRAGRDGKASLCILYYGREDRDRAASMMARDAARQPTKGAGVQAQ 402
Query: 276 ERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG-EQIPVSLCKNSCDACKHPNLLAK 331
++ +V YCE + CR K I + F E+ P C +CD CK L +
Sbjct: 403 QQQLMNRAKSLQALVGYCEATDKCRHKLIAKYFADEEDPP--CDFACDWCKDAEGLVR 458
>gi|281421757|ref|ZP_06252756.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281404252|gb|EFB34932.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 726
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 194/350 (55%), Gaps = 23/350 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ D+ +G + +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 KVKNDILNG--TTKLLYVAPESLTKEDNVEFLKTVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA KV+ D+ ++L + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGVAPVIALTATATDKVRTDIKKNLGIMDAKEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ D + ++ + I+YCL R +EL+ L A I A YHAGL+ RS
Sbjct: 217 KN--KDIDRQIIMFIRQHKGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D R++E + +N+ Q + + Y E S CRRK +L
Sbjct: 335 IAFYARKDLRKLEKFM-ENKPVAEQDIGRQL---------LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPN--LLAK--YLGELTSAVLQKNHFSQIFI 351
FGE+ C N CD C HP AK L L S K +F Q +I
Sbjct: 385 YFGEEYHEENCHN-CDNCLHPTEKFEAKDALLVVLESVAAVKENFRQEYI 433
>gi|213962479|ref|ZP_03390741.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
gi|213954805|gb|EEB66125.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
Length = 727
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 102 EVMEDISAGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L + V KSSFNRPNL+YEVR
Sbjct: 156 PEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEANVFKSSFNRPNLYYEVR 215
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 216 PK--TKNVDADIIRFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 274 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 333
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 334 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 382
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 383 LHYFGEE 389
>gi|340346831|ref|ZP_08669950.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433652062|ref|YP_007278441.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
gi|339611048|gb|EGQ15888.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433302595|gb|AGB28411.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
Length = 742
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 199/361 (55%), Gaps = 35/361 (9%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATP---GFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
++ +D+ SGK +LLYV PE F + K ++ AIDEAHCIS WG
Sbjct: 102 NQVEQDVHSGK--TKLLYVAPESLNKEDNLAFFTSFK-------ISFYAIDEAHCISEWG 152
Query: 62 HDFRPSYRKLS------SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFN 115
HDFRP YR + + ++ VP++ALTATA KV+ D+ +SL + + KSSFN
Sbjct: 153 HDFRPEYRNIRPTIDRIACEQHVDKVPVIALTATATDKVRTDIKKSLGIMDAPDFKSSFN 212
Query: 116 RPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAY 175
RPNL+YEVR K +D + + L+ + IVYCL R +ELS L G A Y
Sbjct: 213 RPNLYYEVRPKVSEEDTDSQIIRFLRQHEGKSGIVYCLSRKKVEELSKKLQLNGFKAAPY 272
Query: 176 HAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGR 235
HAGL+ + R+ DD++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GR
Sbjct: 273 HAGLDTELRTKTQDDFLKEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGR 332
Query: 236 AGRDQLPSKSLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
AGRD + +Y D +++E F+ +K +++ E + Y E
Sbjct: 333 AGRDDGEGICIAFYSPKDLKKLEKFMENKGEAEKEIGRQLLEETKA-----------YAE 381
Query: 295 GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNL---LAKYLGELTSAVLQ-KNHFSQIF 350
S CRR+ +L FGE+ P C N CD CKHP L E+ SAV K +F Q +
Sbjct: 382 TSVCRRRFLLHYFGEEYPKPDCGN-CDNCKHPQKPRDAQDALVEVLSAVRAVKENFDQPY 440
Query: 351 I 351
I
Sbjct: 441 I 441
>gi|406659948|ref|ZP_11068084.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
gi|405556351|gb|EKB51290.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
Length = 726
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 192/323 (59%), Gaps = 20/323 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ +++ SGK +LLYV PE + LK L+ VAIDEAHCIS WGHDF
Sbjct: 97 NKVKKEVLSGKT--KLLYVAPESLTKEENILFLKD----AKLSFVAIDEAHCISEWGHDF 150
Query: 65 RPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ S+ + + +PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NL+YEV
Sbjct: 151 RPEYRKIKSIIAQVGESLPIIALTATATPKVQQDIQRNLHMEEADLYKSSFNRTNLYYEV 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + ++ + +K++ I+YCL R +E++ L GI A YHAGL+
Sbjct: 211 RPK-IKNETKKQIIKYIKSHKGKSGIIYCLSRKKVEEIADLLKVNGIKAAPYHAGLDQSV 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R DD+++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 270 RIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y +D ++E K ++ ER + K + +M Y E S CRRK +
Sbjct: 330 HCLMFYRYEDIIKLE--------KFNKDKPVTERENAKVL--LQEMAAYAESSICRRKFL 379
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE + C CD CK P
Sbjct: 380 LHYFGELLEDD-C-GFCDNCKKP 400
>gi|108864717|gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 766
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 166 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 225
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 226 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 285
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 286 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 405 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 449
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 450 RSCRRGAFFRHFGE--AAQDCNGMCDNC 475
>gi|319954189|ref|YP_004165456.1| ATP-dependent DNA helicase recq [Cellulophaga algicola DSM 14237]
gi|319422849|gb|ADV49958.1| ATP-dependent DNA helicase RecQ [Cellulophaga algicola DSM 14237]
Length = 733
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 182/308 (59%), Gaps = 23/308 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ SG +LLYV PE ++ L+ + L+ VA+DEAHCIS WGHDFR
Sbjct: 104 QVKSDITSG--ITKLLYVAPESLTKDEYVEFLQSVK----LSFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L S+ + L D +PI+ LTATA PKVQ+D++++L + + + K+SFNRPNLFYEVR
Sbjct: 158 PEYRNLRSIISRLDDTIPIIGLTATATPKVQEDIIKNLGITDADLFKASFNRPNLFYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R +EL+ L G+S YHAG + K R
Sbjct: 218 PK--TQNIEADIIRFVKQNTGKSGIIYCLSRKKVEELAQILQVNGVSAVPYHAGFDTKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 SKYQDMFLMEGVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L +Y D ++E F + + +++ I + +MV Y E S RRK
Sbjct: 336 CLAFYSYKDIEKLE------------KFMSGKPVAEQEIGNALLQEMVAYAETSMSRRKF 383
Query: 303 ILESFGEQ 310
IL FGE
Sbjct: 384 ILHYFGEH 391
>gi|428771662|ref|YP_007163452.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
gi|428685941|gb|AFZ55408.1| ATP-dependent DNA helicase RecQ [Cyanobacterium aponinum PCC 10605]
Length = 707
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 189/315 (60%), Gaps = 18/315 (5%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLS 72
SGK ++LLY+ PE + F S L + + AIDEAHCIS WGHDFR YR+L
Sbjct: 104 SGK--IKLLYLAPERLISEKFQSFLNTVAKTNAIASFAIDEAHCISEWGHDFRLEYRQLR 161
Query: 73 SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD-D 131
LR P +PI ALTATA P+VQ+D+++ L L+NP++ + SFNRPNL+YEVR ++ +
Sbjct: 162 QLRQRFPQIPITALTATATPRVQQDIIQQLRLRNPIIRRFSFNRPNLYYEVRPREKRNYH 221
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
L + L+ +G I+YCL R T ++L+ L IS YH GL D+ RS D +
Sbjct: 222 QILQLINSLEGSG----IIYCLARKTTEDLAYRLRQDNISALPYHGGLTDEMRSHHQDCF 277
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
I +++VATVAFGMGI++ DVR V H ++P+++E++YQESGRAGRD P+K +L Y
Sbjct: 278 IRDDARIMVATVAFGMGINKPDVRFVIHHDLPRNIESYYQESGRAGRDGEPAKCILLYNP 337
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
D ++ + + + ++ N Q K++ ++ +Y E + CRR L FGE+
Sbjct: 338 SDEYKINYFIKQKENINEQ---------KQAREQLKKVQEYAETNYCRRIVQLGYFGEKY 388
Query: 312 PVSLCKNSCDACKHP 326
C CD C +P
Sbjct: 389 KGD-C-GGCDNCLNP 401
>gi|147919945|ref|YP_686301.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
gi|110621697|emb|CAJ36975.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
Length = 605
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 188/321 (58%), Gaps = 18/321 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I + L GK +++LY++PE + L+K+ + L+AIDEAHCIS WGH FRP
Sbjct: 104 IEDQLLGGK--IKVLYISPERITQDSCLQFLEKLD----VKLIAIDEAHCISMWGHQFRP 157
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR+LS L++ P VP++ALTA+A P+V++D+ L L +P SFNR NL YEVR K
Sbjct: 158 DYRRLSLLKSKFPKVPMIALTASAIPEVREDIASQLKLVSPKKYLGSFNRINLRYEVREK 217
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
DA A + S + N IVYCL R T +EL+ L GI YHA L D RS+
Sbjct: 218 K---DATAQILSYIARNRGKSGIVYCLARKTTEELAEKLRRAGIKALPYHADLPDTVRSA 274
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
+ ++ +VV ATVAFGMGID+ DVR V H+++PK++EA+YQE+GRAGRD S +
Sbjct: 275 TQEKFVRDDVEVVCATVAFGMGIDKPDVRYVIHYDMPKNLEAYYQETGRAGRDGEASDCI 334
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
++Y D +M +L K T S+ ++ + M D+CE CRRK +L
Sbjct: 335 MFYSPADALKMRGLLEKEY--------TDYHLSRVAMKKWQAMRDFCETRLCRRKYLLSY 386
Query: 307 FGEQIPVSLCKNSCDACKHPN 327
FGE+ C + CD C HP
Sbjct: 387 FGEEYDDPAC-DGCDNCLHPK 406
>gi|311746386|ref|ZP_07720171.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
gi|126575272|gb|EAZ79604.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
Length = 725
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 190/321 (59%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ ++ S K +LLYV PE ++ LK L+ VAIDEAHCIS WGHDF
Sbjct: 97 TKVKNEVLSKKT--KLLYVAPESLTKEENIAFLKSAE----LSFVAIDEAHCISEWGHDF 150
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YRK+ ++ + P++PI+ALTATA PKVQ+D+ +L ++ + KSSFNR NLFYEV
Sbjct: 151 RPEYRKIKTIVAQIAPNLPIIALTATATPKVQQDIQRNLQMEEADLFKSSFNRTNLFYEV 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + +++ L +K + I+YCL R +E++ L I+ A YHAGL+
Sbjct: 211 RPK-MKNESKKQLIKFIKNHKGKSGIIYCLSRKKVEEIAQLLQVNQINAAPYHAGLDSAI 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R DD+++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD L
Sbjct: 270 RIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAGRDGLEG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y +D ++E K ++ ER + + + +M Y E CRRK I
Sbjct: 330 HCLMFYRYEDIVKLE--------KFNKDKPVTERENARVL--LHEMAAYAETGVCRRKFI 379
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE C CD CK
Sbjct: 380 LNYFGETFEKD-C-GYCDNCK 398
>gi|386821390|ref|ZP_10108606.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386426496|gb|EIJ40326.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 699
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 188/320 (58%), Gaps = 25/320 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I+ D+++ K ++LLYV PE +S L+ I S ++L+A+DEAHCISSWGHDFRP
Sbjct: 101 IFNDIEAKK--IKLLYVAPE------SLSYLENIFSSTKISLIAVDEAHCISSWGHDFRP 152
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
+Y +L L+N P+ P++ALTATA ++D+ L + N +SF+R NL EVR
Sbjct: 153 AYTQLGFLKNRFPNTPLIALTATADKATREDIANQLNISNAKKFVASFDRKNLSLEVRPG 212
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D + L + IVYCL R T + ++ L G + AYHAG+N RS
Sbjct: 213 T---DRIKQIIQFLNKRPNESGIVYCLSRKTTESIAEKLQQAGYNAEAYHAGVNHDGRSK 269
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
V +D+I+ + Q+V ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD LPS +L
Sbjct: 270 VQEDFINDKTQIVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLPSYTL 329
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
L++ D ++ Q F+ +S+ ++ +M Y + CRRK +L
Sbjct: 330 LFHSYADVVQL------------QKFAEGAGNSEVQLAKLERMKQYADALSCRRKILLSY 377
Query: 307 FGEQIPVSLCKNSCDACKHP 326
FGE I C N CD CK+P
Sbjct: 378 FGEFIEKD-CGN-CDVCKNP 395
>gi|108936937|dbj|BAE96002.1| RecQ-like helicase 2 [Oryza sativa Japonica Group]
Length = 768
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 168 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 227
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 228 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 287
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 288 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 346
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 347 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 407 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 451
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 452 RSCRRGAFFRHFGE--AAQDCNGMCDNC 477
>gi|332882718|ref|ZP_08450329.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679220|gb|EGJ52206.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 729
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/307 (42%), Positives = 185/307 (60%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + + LK + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 EVMEDISNGKT--KLLYVAPESLIKEEYANFLKTVP----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L ++PI+ALTATA PKVQ+D++++L + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNIKTIIERLGSNIPIVALTATATPKVQEDILKNLGMLEANVFKSSFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R ++L+ L GIS YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNTKKSGIIYCLSRKKVEDLAQTLQVNGISAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 336 CLAFYSYKDVEKLEKFMIGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|330841793|ref|XP_003292875.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
gi|325076832|gb|EGC30587.1| hypothetical protein DICPUDRAFT_157642 [Dictyostelium purpureum]
Length = 884
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 191/335 (57%), Gaps = 15/335 (4%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+Q + I + LD ++ ++YV+PE + F+ L ++++G + + +DEAHCIS W
Sbjct: 492 LQNRKTIEQLLDKDNCNISIVYVSPERLSQTEFLEVLNTLNNQGRIKRLIVDEAHCISEW 551
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP+YRK+S R P+VPI A TATA P V+ D+ L L NP+ + SSF R NL
Sbjct: 552 GHDFRPAYRKISLFRENFPNVPIAAFTATAKPSVESDIKNELKLHNPVTIASSFLRTNLL 611
Query: 121 YEVRYKDL-LDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
Y++R K ++AD+ +K +C I+YC C+ LS YL+ I YH
Sbjct: 612 YQIRSKSPDQSRSFADIADYIKMRQSRSCGIIYCATTNDCELLSQYLNEENIDSHFYHGS 671
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L + R + W + +++V T+AFGMGID KDVR + H+ +P S+EA+YQ++GRAGR
Sbjct: 672 LKNSERVEIQKAWTNKSFKIIVTTLAFGMGIDVKDVRFIIHYTMPSSIEAYYQQTGRAGR 731
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERS--------SKKSISDFSQMV 290
D LPS+ +LYY +D ++ I+ +S F + E+ ++ + +
Sbjct: 732 DGLPSECILYYTSNDYFKISRIIQTQAQPSSSYFYSEEQELVAQKQQMTENKVELLDSIN 791
Query: 291 DYCEGSG-CRRKKILESFGEQIPVSL-CKNSCDAC 323
+C CRR ++L+ FGE VS CK +CD C
Sbjct: 792 SFCRNDDVCRRVQLLDYFGE---VSKPCKTNCDIC 823
>gi|312129258|ref|YP_003996598.1| ATP-dependent DNA helicase recq [Leadbetterella byssophila DSM
17132]
gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM
17132]
Length = 773
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/309 (42%), Positives = 183/309 (59%), Gaps = 20/309 (6%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL-RNY 77
+LLY+ PE + LKK ++ VA+DEAHCIS WGHDFRP YRK+ + N
Sbjct: 114 KLLYIAPESLTKEDNLEFLKKAK----ISFVAVDEAHCISEWGHDFRPEYRKIKDIIENI 169
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+PI+ALTATA PKVQ D+ +SL + + ++ K+SFNR NL+YEVR K +A L
Sbjct: 170 DTALPIVALTATATPKVQLDIKKSLNMDDSVIFKTSFNRANLYYEVRPKQ---NAKKQLI 226
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ N IVYCL R +E++ L+ G YHAGL+ + R D +++
Sbjct: 227 KFVSQNRGKSGIVYCLSRKKVEEIAELLNVNGFKALPYHAGLDPEVRMKNQDAFLNENCD 286
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
+VVAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD + L++Y +DD ++
Sbjct: 287 IVVATIAFGMGIDKPDVRFVVHYDAPKSLEGYYQETGRAGRDGIDGTCLMFYALDDITKL 346
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E N+ KN ER + K++ +MV Y CRR+++L FGEQ+ C
Sbjct: 347 EKF---NKDKN-----VTERDNAKAL--LMEMVAYSSLGVCRRRQLLSYFGEQMEKD-C- 394
Query: 318 NSCDACKHP 326
CD CK P
Sbjct: 395 GFCDNCKKP 403
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 189/326 (57%), Gaps = 19/326 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY DL+S P ++LLYVTPE ++++ F L ++S ++ IDEAHC+S WGHDFR
Sbjct: 822 IYRDLESQPPMVKLLYVTPEKISSSARFQDTLDTLNSNNYISRFVIDEAHCVSQWGHDFR 881
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+KL L+ P+VP +ALTATA P+V+ D++ L L+N SSFNR NL Y V
Sbjct: 882 PDYKKLGVLKKRFPNVPTIALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYMVLP 941
Query: 126 K---DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K LDD + S I+YCL R CDE S + G+ AYHAGL D
Sbjct: 942 KKGTSTLDDISRYIRS---KPAHFSGIIYCLSRKECDETSKKMCKDGVRSVAYHAGLTDS 998
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R DW++ + +V+ AT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 999 EREGRQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDV 1058
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
++ +LYY D R++ ++ ++ + + K + + ++V YCE + CRR
Sbjct: 1059 AECILYYNYADMLRLKKMMDSDK-------ALQYNVKKIHVDNLYRIVGYCENLTDCRRA 1111
Query: 302 KILESFGEQIPVSLC----KNSCDAC 323
+ L+ FGE C +CD C
Sbjct: 1112 QQLDYFGEHFTSEQCLENKGTACDNC 1137
>gi|77552739|gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 166 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 225
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 226 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 285
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 286 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 405 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 449
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 450 RSCRRGAFFRHFGE--AAQDCNGMCDNC 475
>gi|37522198|ref|NP_925575.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
gi|35213198|dbj|BAC90570.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 746
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 197/323 (60%), Gaps = 14/323 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+T+ + + G+ ++LLY++PE + ++ L+ + +G L+L+A+DEAHC+S WGHD
Sbjct: 109 RTRREQAIAQGR--MKLLYLSPERLLSEECLAFLEYVQRQGGLSLLAVDEAHCVSEWGHD 166
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR+L+++R +P LALTATA +V++D++ L L++P + +SF+RPNL Y V
Sbjct: 167 FRPEYRQLAAVRERFAALPTLALTATATERVRQDILVQLKLRDPHIHIASFDRPNLHYAV 226
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
KD AYA+L L+ AIVYC R + L+ L A G++ YHAG+ +
Sbjct: 227 LAKD--KGAYAELLGRLRRLDGASAIVYCQSRRAVEALAERLVADGLNALPYHAGMAAEM 284
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RS ++ V+VATVAFGMGI + DVR V H+ +P+++E +YQESGRAGRD P+
Sbjct: 285 RSRHQTQFLRDDAPVLVATVAFGMGIAKPDVRAVFHYELPRNLEGYYQESGRAGRDGQPA 344
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+L++ DR ++E+++++ + Q + S +QM+ Y E + CRR+ +
Sbjct: 345 DCVLFFSPGDRAKIEYLVAQKSDPHEQRLAR---------SQLAQMLAYAESTVCRRRIL 395
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE + + C CD C+ P
Sbjct: 396 LGYFGEALAEADC-GGCDNCRSP 417
>gi|430004767|emb|CCF20566.1| ATP-dependent DNA helicase recQ [Rhizobium sp.]
Length = 642
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 177/310 (57%), Gaps = 17/310 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L LLYVTPE TPGF + I + L AIDEAHC+S WGHDFRP YR+L L +
Sbjct: 147 ALDLLYVTPERIVTPGF----RDIVGSAKIALFAIDEAHCVSQWGHDFRPEYRELGQLAD 202
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP +ALTATA P + D++E L L + V +SF+RPN+ YE+ +D L
Sbjct: 203 LFPGVPRMALTATADPHTRDDIIERLGLHSAEVFTTSFDRPNIAYEIVERD---QPRQQL 259
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L + + IVYCL R +E + +L+ G+ YHAG++ R + D ++
Sbjct: 260 LRFLSRHKGSSGIVYCLSRAKVEETADWLNEQGVRALGYHAGMDRAVRDANQDAFLKEED 319
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D +
Sbjct: 320 LCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMTDVIQ 379
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
++ QS + R + + ++ CE +GCRR+ IL FGE P C
Sbjct: 380 RGRMIDGGQSSDEVKRVERAK--------LNALLGICETAGCRRQAILAHFGEAHPGG-C 430
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 431 GN-CDTCLKP 439
>gi|389806094|ref|ZP_10203234.1| ATP-dependent DNA helicase RecQ [Rhodanobacter thiooxydans LCS2]
gi|388446093|gb|EIM02139.1| ATP-dependent DNA helicase RecQ [Rhodanobacter thiooxydans LCS2]
Length = 611
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 182/309 (58%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE T F+ L+ I + L AIDEAHC+S WGHDFRP YR+L L
Sbjct: 109 LNLLYVAPERLLTSRFLGLLESIE----VALFAIDEAHCVSQWGHDFRPEYRELVVLHQR 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P+ +++++E L LQ SSF+RPN+ Y V L +A L
Sbjct: 165 FPQVPRIALTATADPRTREEIVERLALQEARRFVSSFDRPNIGYRV---GLRHNAKRQLA 221
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + D IVYCL R D+ +A+L+ G+ YHAGL+ R+ ++
Sbjct: 222 EFLQGHQDESGIVYCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGV 281
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+++ + YG+ D M
Sbjct: 282 VMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTM 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E + CRR+ +L +FGE P C
Sbjct: 342 SQMIAQSESDDERKRVERQK--------LESLLAYAEATDCRRQLLLGAFGESHP-GACG 392
Query: 318 NSCDACKHP 326
+ CD C P
Sbjct: 393 H-CDNCVAP 400
>gi|341891862|gb|EGT47797.1| hypothetical protein CAEBREN_03628 [Caenorhabditis brenneri]
Length = 617
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 22/327 (6%)
Query: 4 KTKIYEDLDSGKPS-LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+TK ED + K S RLLYVTPE L + M+KL+K S G L L+AIDE HC S WG
Sbjct: 164 ETKRVEDAITNKDSQFRLLYVTPEKLAKSKRMMNKLEKSLSVGFLKLIAIDEVHCCSQWG 223
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFR Y L+ L+ VPIL LTATA V DV + L +Q LV ++ FNR NL Y
Sbjct: 224 HDFRTDYAFLNVLKRQFKGVPILGLTATATSNVLDDVKDMLGIQAALVFRAGFNRSNLKY 283
Query: 122 EVRYKDLLDDAYAD-LCSVLKA--NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
EV K D+ A+ + V+ +G T IVYCL R C++++ L GI YHA
Sbjct: 284 EVISKKSSDEECAEEIAHVINTQFSGQT-GIVYCLSRNDCEKMATLLKTKGIRAKHYHAY 342
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
+ +SS +WIS + QV+VATVAFGMGID+ DVR V H IPKS+E +YQESGRAGR
Sbjct: 343 MEPSEKSSSHQNWISGKIQVIVATVAFGMGIDKPDVRFVIHHTIPKSIENYYQESGRAGR 402
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSG 297
D LP+ +LY+ + D + ++ ++++ +S+ +V Y + S
Sbjct: 403 DGLPATCILYFKLSDVFKQSSMVQQDRT---------------GLSNLYNIVRYASDSST 447
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACK 324
CRR K+ E F E S C+ CD C+
Sbjct: 448 CRRVKMAEHFEEAWEPSWCQKQCDVCQ 474
>gi|67468457|ref|XP_650264.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466865|gb|EAL44882.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710010|gb|EMD49159.1| recQ family helicase [Entamoeba histolytica KU27]
Length = 774
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 129/316 (40%), Positives = 185/316 (58%), Gaps = 15/316 (4%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
D+++ K ++++YV PEL + M++ +KK++ RGL + + IDEAHCIS WGHDFR SY
Sbjct: 469 DIETRK--IKIVYVAPELLSCSWKMNEAMKKLYDRGLFSYLVIDEAHCISQWGHDFRQSY 526
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
+L R P V + TATA +V+ D++ S+ L+ +V +FNRPNL YE R K
Sbjct: 527 VELREFRKTFPSVQTILFTATATERVKNDILLSMGLEEAIVFNQTFNRPNLRYETRVKS- 585
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
D+ ++ + + C IV+CL + C+ LS +L GI YHAGL+ K R V
Sbjct: 586 -PKVEVDIAHYIQQHPNQCGIVFCLSKKDCESLSKFLINYGIRATHYHAGLDAKRRKKVQ 644
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+DW++ VV ATVAFGMGID+ DVR V H +P S+E ++QESGRAGRD PS ++Y
Sbjct: 645 NDWMNGTFLVVCATVAFGMGIDKPDVRFVIHQTMPSSIEQYFQESGRAGRDGKPSDCIIY 704
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ M D R+E+ L ++ KN + S ++ + MV+ C S CRRK L F
Sbjct: 705 FSMKDIARVEW-LKRDMGKNELTASQQQ--------SINAMVNLCITSECRRKIQLMYFD 755
Query: 309 EQIPVSLCKNSCDACK 324
E C CD C+
Sbjct: 756 ESFNEEKC-TGCDNCE 770
>gi|115486841|ref|NP_001068564.1| Os11g0708600 [Oryza sativa Japonica Group]
gi|113645786|dbj|BAF28927.1| Os11g0708600, partial [Oryza sativa Japonica Group]
Length = 685
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 85 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 144
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 145 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 204
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 205 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 263
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 264 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 323
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 324 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 368
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 369 RSCRRGAFFRHFGE--AAQDCNGMCDNC 394
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 186/325 (57%), Gaps = 15/325 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHDFR
Sbjct: 736 IYLQLSKKDPIIKLLYVTPEKVCASNRLISILENLYERKLLARFVIDEAHCVSQWGHDFR 795
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++++ LR P VP++ALTATA +VQ D++ L + P V SFNR NL Y V
Sbjct: 796 PDYKRMNMLRQKFPSVPVMALTATANSRVQTDILTQLKILRPQVFSMSFNRHNLKYYVLP 855
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A+ L + K + I+YCL R CD ++ L G++ AYHAGL+D AR
Sbjct: 856 KKPKKVAFDCLEWIRKHHPYDSGIIYCLSRWECDTMADTLQKDGLAALAYHAGLSDAARD 915
Query: 186 SVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
V WI+ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD S
Sbjct: 916 EVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISH 975
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
LL+Y D R++ ++ + N + T ++ MV YCE + CRR ++
Sbjct: 976 CLLFYTYHDVTRLKRLIMMEKDGNRHTKETH-------FNNLYSMVHYCENITECRRIQL 1028
Query: 304 LESFGEQ-IPVSLCKN----SCDAC 323
L FGE C+ SCD C
Sbjct: 1029 LAYFGENGFNPEFCRKHPDVSCDNC 1053
>gi|327402848|ref|YP_004343686.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
gi|327318356|gb|AEA42848.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
Length = 726
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 183/321 (57%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +GK +LLYV PE + L + ++ AIDEAHCIS WGHDFR
Sbjct: 102 RVKEDILAGKT--KLLYVAPESLTKQENIDFLTSVP----ISFFAIDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR+L + + DV I+ALTATA PKVQ D+ ++L + + + KSSFNR NL+YE+R
Sbjct: 156 PEYRRLREIFEKISDVAIIALTATATPKVQADIQKNLNMMDADLFKSSFNRDNLYYEIRA 215
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + ++ ++ I+YCL R +E + L GI+ AYHAGL+ R+
Sbjct: 216 KQ---NVEKEIIKYIRQREGKSGIIYCLSRKKVEETAELLQVNGINALAYHAGLDATTRA 272
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD +
Sbjct: 273 RHQDMFLMEEVDVIVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGVGEC 332
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D ++E L Q E+ K + S++V Y E S CRRK IL
Sbjct: 333 ITFYSYKDIEKLEKFL--------QGKPVSEQEIGKQL--LSEIVSYSETSVCRRKFILH 382
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C CD CK P
Sbjct: 383 YFGEEFDEQGCHEMCDNCKFP 403
>gi|325298909|ref|YP_004258826.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324318462|gb|ADY36353.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 606
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 188/310 (60%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLY++PE L A ++ LK IH ++L AIDEAHCIS WGHDFRP Y +L+ LR
Sbjct: 104 VKLLYISPERLLAEINYL--LKDIH----ISLFAIDEAHCISQWGHDFRPEYTQLAVLRE 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L +++P + SSF+RPNL +V+ + +
Sbjct: 158 QFPHVPIIALTATADKITREDIVKQLAMRDPQIFISSFDRPNLSLDVKRGYQQKEKNRAV 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + IVYC+ R T ++++ L G+S A YHAGL+ R +D+I+ R
Sbjct: 218 LEFITRHKGESGIVYCMSRNTTEKVADMLEEHGVSTAVYHAGLSSTIRDKAQEDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSFADI-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+LS+ S++ Q E+ +M Y E CRR+ +L FGE + C
Sbjct: 336 --IMLSRFASESGQQEVNMEK--------LKRMQQYAEADICRRRILLNYFGETMDHD-C 384
Query: 317 KNSCDACKHP 326
N CD C++P
Sbjct: 385 GN-CDVCRNP 393
>gi|154494364|ref|ZP_02033684.1| hypothetical protein PARMER_03719 [Parabacteroides merdae ATCC
43184]
gi|154085808|gb|EDN84853.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 729
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + L++++ ++ A+DEAHCIS WGHDFR
Sbjct: 106 QVKDDIRNGRT--KLLYVAPESLTKDENVEFLRQVN----ISFYAVDEAHCISEWGHDFR 159
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 160 PEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEIRP 219
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K+N I+YCL R +E + L A GI YHAG++ + RS
Sbjct: 220 KTANIDR--EIIKYIKSNEGKSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRS 277
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 278 SNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 337
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 338 IAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLH 387
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL SAVL+ K F +I +M G
Sbjct: 388 YFGEEYLEENCGN-CDNCLNPKKKVE-AKELLSAVLEVVGTLKEKFKAEYIV--NMLVGN 443
Query: 361 QYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
+ SE + + +E SGS+E+ + I +I+
Sbjct: 444 ETSEIQSYKHNELEIFGSGSDEEEKTWNAVIRQALIA 480
>gi|423346935|ref|ZP_17324622.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409218596|gb|EKN11564.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + L++++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKDDIRNGRT--KLLYVAPESLTKDENVEFLRQVN----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 157 PEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEIRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K+N I+YCL R +E + L A GI YHAG++ + RS
Sbjct: 217 KTANIDR--EIIKYIKSNEGKSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 SNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 IAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL SAVL+ K F +I +M G
Sbjct: 385 YFGEEYLEENCGN-CDNCLNPKKKVE-AKELLSAVLEVVGTLKEKFKAEYIV--NMLVGN 440
Query: 361 QYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
+ SE + + +E SGS+E+ + I +I+
Sbjct: 441 ETSEIQSYKHNELEVFGSGSDEEEKTWNAVIRQALIA 477
>gi|108864716|gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|215701406|dbj|BAG92830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 665
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 65 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 124
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 125 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 184
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 185 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 243
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 244 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 303
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 304 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 348
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 349 RSCRRGAFFRHFGE--AAQDCNGMCDNC 374
>gi|423725451|ref|ZP_17699588.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409234575|gb|EKN27403.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/397 (37%), Positives = 222/397 (55%), Gaps = 32/397 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + L++++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKDDIRNGRT--KLLYVAPESLTKDENVEFLRQVN----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE+R
Sbjct: 157 PEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMIDASVFKSSFNRSNLYYEIRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K+N I+YCL R +E + L A GI YHAG++ + RS
Sbjct: 217 KTANIDR--EIIKYIKSNEGKSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 SNQDAFLMEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 IAFYAYKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETSVCRRKVLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQ-----KNHFSQIFISSQDMTDGG 360
FGE+ C N CD C +P + EL SAVL+ K F +I +M G
Sbjct: 385 YFGEEYLEENCGN-CDNCLNPKKKVE-AKELLSAVLEVVGTLKEKFKAEYIV--NMLVGN 440
Query: 361 QYSEFWN-RDDE----ASGSEEDISDCDGNINLVIIS 392
+ SE + + +E SGS+E+ + I +I+
Sbjct: 441 ETSEIQSYKHNELEIFGSGSDEEEKTWNAVIRQALIA 477
>gi|77552741|gb|ABA95538.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 556
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 140/328 (42%), Positives = 189/328 (57%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ +Y+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 166 EVEKFVYKALDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 225
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D++E L + + S+ NRPNLF
Sbjct: 226 GHDFRPDYKNLGILKVQFPSVPMIALTATATNKVQIDLIEMLHIPRCVKFVSTINRPNLF 285
Query: 121 YEVRYKD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
Y+V K ++ D A+ S N ++ IVYC R C++++ LS GI YH
Sbjct: 286 YKVFEKSPVGKVVIDEIANFISESYPNNES-GIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ +R V W S+ QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD LPS+ +LYY D R S E +++ D +V YC+
Sbjct: 405 GRDGLPSECILYYRPGDVPR------------QSSMVFYENCGLQNLYD---IVRYCQSK 449
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR FGE C CD C
Sbjct: 450 RSCRRGAFFRHFGE--AAQDCNGMCDNC 475
>gi|47224193|emb|CAG13113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 827
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 197/359 (54%), Gaps = 47/359 (13%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISS----- 59
+IY L +P ++LLYVTPE ++A+ +S L+ ++ RGLL IDEAHC+S
Sbjct: 112 RIYMQLSRKEPIVKLLYVTPEKVSASNKLISALQNLYERGLLARFVIDEAHCVSQVCFQV 171
Query: 60 ---------------------WGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDV 98
WGHDFRP Y+KL LR P VP++ALTATA P+VQKD+
Sbjct: 172 YTQSAECVQTFTFNPPTLILQWGHDFRPDYKKLHELRKKFPQVPMMALTATATPRVQKDI 231
Query: 99 MESLCLQNPLVLKSSFNRPNLFYEV---RYKDLLDDAYADLCSVLKANGDTCAIVYCLER 155
L ++ P V SFNR NL Y V + K + +D + + K I+YCL R
Sbjct: 232 HNQLNMRQPQVFTMSFNRTNLKYAVLPKKPKKVDEDC---ISWIKKHYPRDSGIIYCLSR 288
Query: 156 TTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK-QVVVATVAFGMGIDRKDV 214
CD ++ L G+ +YHAGL D R V WI+ QV+ AT+AFGMGID+ DV
Sbjct: 289 NDCDTMAESLQRAGLLALSYHAGLRDGEREYVQTKWINQDGCQVICATIAFGMGIDKPDV 348
Query: 215 RLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFST 274
R V H ++PKS+E +YQESGRAGRD S+ +L+Y D R++ I+S ++ + + +T
Sbjct: 349 RYVIHASLPKSVEGYYQESGRAGRDGEISQCILFYSYTDVHRIKRIISMDREGDGHTKAT 408
Query: 275 RERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGE-QIPVSLCKN----SCDACKHPN 327
++ MV +CE + CRR ++L FGE + S CK SCD C PN
Sbjct: 409 H-------YNNLHSMVHFCENAMECRRIQLLAYFGELKFNRSFCKEHADVSCDNCARPN 460
>gi|298372729|ref|ZP_06982719.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
gi|298275633|gb|EFI17184.1| ATP-dependent DNA helicase RecQ [Bacteroidetes oral taxon 274 str.
F0058]
Length = 726
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/384 (40%), Positives = 210/384 (54%), Gaps = 29/384 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + L+KI ++ A+DEAHCIS WGHDFRP YR++ + N +
Sbjct: 110 KLLYVAPESLTKEDNVEFLRKIK----ISFYAVDEAHCISEWGHDFRPEYRRIRQIINRI 165
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
PI+ALTATA PKVQ+D+ ++L + N V KSSFNR NL+YEVR K + D+
Sbjct: 166 GVAPIIALTATATPKVQQDIQKTLDMTNATVFKSSFNRENLYYEVRPKT--QNIEKDIIK 223
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K+ G IVYCL R +EL+ L GIS YHAGL+ RS D ++ + V
Sbjct: 224 YIKSQGRKSGIVYCLSRKRVEELAESLCLNGISALPYHAGLDAAVRSQNQDFFLMEKCDV 283
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD +L+Y D +++E
Sbjct: 284 IVATIAFGMGIDKPDVRYVIHNDIPKSLEGYYQETGRAGRDGGEGNCILFYSRKDLQKLE 343
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + Y E S CRRK +L FGE+ P C N
Sbjct: 344 --------KFMQGKPNSEQEIGKQL--LVEAASYAESSICRRKMLLHYFGEEYPHDNCCN 393
Query: 319 SCDACKHP-------NLLAKYLGELTSAVLQKNHFSQIFISSQDMTDGGQYSEFWNRDDE 371
CD C HP +LL L EL SA+ K ++IF+ + + + D E
Sbjct: 394 -CDNCLHPKNMTDAKDLLCAVL-ELVSALGGKFR-AEIFVDILTGKENVEADAYHFEDLE 450
Query: 372 ASGS---EEDISDCDGNINLVIIS 392
GS EE+I I IIS
Sbjct: 451 LFGSVTDEEEIKLLQPVIRQAIIS 474
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 187/311 (60%), Gaps = 11/311 (3%)
Query: 19 RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+L+Y+TPE L +PG MS + +++ G ++ IDE HC+S WG DFR Y L L+
Sbjct: 363 KLVYLTPEKLVKSPGLMSAMDHLYAIGKIDRFVIDEVHCVSHWGQDFRKDYLHLDMLKQR 422
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP+L LTATA KV+ D+++ L +++ + +SSFNR NL YE+R K + D+
Sbjct: 423 YPKVPLLCLTATATLKVKDDILKRLGIKDAKLFQSSFNRTNLLYEIRDKKQFKNVTEDIV 482
Query: 138 SVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISSR 195
++L+ C I+YC+ R C +LS L I C YHA ++ R + + W+ +
Sbjct: 483 NMLRTRFKGKCGIIYCISRKECQKLSEILKRNYHIKCDYYHAEVSYNQRKDIQERWMKNE 542
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
Q+++AT+AFGMGI++KDVR V H+++PKS+E + QE GRAGRDQ S+ +LYY DR+
Sbjct: 543 IQIIIATIAFGMGINKKDVRFVIHYSMPKSLEGYVQECGRAGRDQNKSECILYYQYGDRK 602
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
R +F + N +TR R ++ + +S +++YCE CRR+ L+ GE+ S
Sbjct: 603 RNDFFILTNND------NTRTRKNENVHALYS-ILEYCEEPYYCRRQLQLQFLGEKFDPS 655
Query: 315 LCKNSCDACKH 325
C CD C+
Sbjct: 656 KCNKMCDNCRQ 666
>gi|397781462|ref|YP_006545935.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396939964|emb|CCJ37219.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 417
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 178/307 (57%), Gaps = 16/307 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++LYV+PE + F++ + + + L+A+DEAHCIS WGH FRP YR L L+
Sbjct: 107 VQILYVSPEKAVSDDFLALIASLP----ITLIAVDEAHCISMWGHQFRPEYRSLQVLKER 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P V+ D+ L L NP V SFNR NL Y V K+ +D Y L
Sbjct: 163 FPQVPMVALTATATPDVRDDIARQLNLNNPSVYVGSFNRENLRYLVVQKE--EDVYERLR 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ I+Y R + L+A L A GI YHAG+ AR D +++ +
Sbjct: 221 GYLQGRRTDAGIIYTATRDGAETLAARLQADGIPALPYHAGMTAAARERTHDRFMTGKVP 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+ AT AFGMGID+ DVR V H+++PK++EA+YQESGRAGRD S +L+Y DD +R+
Sbjct: 281 VICATSAFGMGIDKPDVRFVVHYDMPKTLEAYYQESGRAGRDGGESDCILFYHDDDAKRL 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRRKKILESFGEQIPVSLC 316
+ ++ Q R S +MVDYC +GCRR++ILE FGE+ C
Sbjct: 341 RSFIDRDLPSEFQREVAR--------SKLQKMVDYCSIAAGCRRRQILEYFGERFETLPC 392
Query: 317 KNSCDAC 323
+ CDAC
Sbjct: 393 -SGCDAC 398
>gi|298708608|emb|CBJ26095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1537
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/335 (40%), Positives = 197/335 (58%), Gaps = 27/335 (8%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
V ++Y D G L+LLY+TPE +P L+++HS+GLL+ IDEAHC+S WG
Sbjct: 675 VMDQLYRLQDYG--GLKLLYITPEKFCRSPSMNKALQRLHSKGLLSRFVIDEAHCVSDWG 732
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP Y KL LR PDVPI+ALTATA V+ D + L L+NP V SFNRPNL Y
Sbjct: 733 HDFRPDYLKLGILRKDFPDVPIMALTATANTVVRDDTIRRLQLRNPTVRTESFNRPNLKY 792
Query: 122 EVRYKD--LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL------SAGG---- 169
E+R K +LD ++ V+++ IVYCL R C+++++ L + GG
Sbjct: 793 EIRPKKAAVLD----EIAKVMQSFPGQSGIVYCLSRKDCEKVASGLLKKLSETTGGHRGR 848
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
YHA ++ V +W + R ++ AT+AFGMGI++ DVR V H ++PK++ F
Sbjct: 849 FRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTHF 908
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGRD L SK ++++ D+ R+E ++++++ S F R+ ++ + +
Sbjct: 909 YQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDK---SLPFQRRQ----SNLQEVYKC 961
Query: 290 VDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC 323
V +C CRR ILE FGE P CK +CD C
Sbjct: 962 VRFCINEVECRRVLILEFFGEHFPRGRCKATCDNC 996
>gi|445120845|ref|ZP_21379373.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
gi|444839226|gb|ELX66305.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
Length = 594
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/283 (44%), Positives = 169/283 (59%), Gaps = 15/283 (5%)
Query: 46 LNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ 105
++ AIDEAHCIS WGHDFRP YRK+ + + PI+ALTATA KV+ D+++SL ++
Sbjct: 4 VSFYAIDEAHCISEWGHDFRPEYRKIRQAIDQIGKAPIIALTATATDKVRTDIVKSLGIE 63
Query: 106 NPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL 165
+ KSSFNRPNL+YEVR K +D + +K N I+YCL R +EL+A L
Sbjct: 64 DCAEFKSSFNRPNLYYEVRPKKNEEDTNRQIIKFIKQNLGKSGIIYCLSRKKVEELAAVL 123
Query: 166 SAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKS 225
A I A YHAGL+ + RS DD++ V+VAT+AFGMGID+ DVR V H++IPKS
Sbjct: 124 QANDIKAAPYHAGLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKS 183
Query: 226 MEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD 285
+E +YQE+GRAGRD K +++Y SKN K ++F + +++ I
Sbjct: 184 LEGYYQETGRAGRDGEEGKCIVFY------------SKNDLKKLENFMEGKPVAEQDIGR 231
Query: 286 --FSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHP 326
+ Y E S CRRK +L FGE+ C CD C HP
Sbjct: 232 QLLQETETYAESSVCRRKLLLHYFGEEYTKDNC-GMCDNCLHP 273
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 182/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE LT ++ L+K++ + L + IDEAHC+S WGHDFRP Y++L +LR+
Sbjct: 801 IELLYITPEMLTKNQTLVNSLEKLNRKSRLARIVIDEAHCVSQWGHDFRPDYKELGNLRS 860
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L +Q + SFNRPNL YEVR K ++ A +
Sbjct: 861 QLPGVPMMALTATATENVKVDVLHNLQMQGCELFSQSFNRPNLTYEVRPKPSKNELLASI 920
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+++ + I+YCL R +C++++ L GI YHAG+ R+ V W +
Sbjct: 921 ANIITTKYPNQSGIIYCLSRDSCEKVAKSLREDYGIKAEHYHAGMKPDERNQVQHGWQAG 980
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +YY D
Sbjct: 981 RSHVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYKDA 1040
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ + + Q R+ +V YCE S CRR +IL F E
Sbjct: 1041 MTITRMIDRGEGSKQQKSRQRQM--------LHNVVQYCENKSDCRRVQILAYFNEYFRR 1092
Query: 314 SLCKNSCDACK 324
C +SCD CK
Sbjct: 1093 EDCNSSCDNCK 1103
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 184/315 (58%), Gaps = 18/315 (5%)
Query: 17 SLRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
S++LLYVTPE+ A+ M + + +H R L+ V IDEAHC+S WGHDFR Y++L LR
Sbjct: 979 SIQLLYVTPEMLASSKMMEAAMGSLHKRNLIARVVIDEAHCVSQWGHDFRKDYKELGKLR 1038
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
L VP +ALTATA P+VQ+D+M +L + K SFNRPNL YEV K D
Sbjct: 1039 TGLRGVPFMALTATATPQVQQDLMRNLSITKCKTFKQSFNRPNLVYEVLEKVKGGQVVQD 1098
Query: 136 LCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ ++++ + C IVYCL + C+++S++L I YHAGL R +V W
Sbjct: 1099 IINLIQTSYKGKCGIVYCLSKNDCEQVSSHLQKARILANFYHAGLTTDERRNVQKRWQCG 1158
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S L+Y +D
Sbjct: 1159 ELKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKISGCYLFYSGNDM 1218
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV----DYCEGS-GCRRKKILESFGE 309
R+ ++ T E ++ +I MV +YC+ CRR ++L F E
Sbjct: 1219 MRILKMI-----------ETGEGATDFTIDHGKTMVRAVANYCDNKVECRRMQVLRYFAE 1267
Query: 310 QIPVSLCKNSCDACK 324
+ + CK +CD CK
Sbjct: 1268 RYDPADCKKTCDNCK 1282
>gi|325300153|ref|YP_004260070.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324319706|gb|ADY37597.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 727
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 187/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + LK + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKADILAGKT--KLLYVAPESLTKEENVEFLKHVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKV+ D+ ++L + + + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPVIALTATATPKVKMDIQKNLGMTDAVEFKSSFNRPNLYYEVRS 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + D D+ +K N + I+YCL R +EL+ L A GI YHAG++ R+
Sbjct: 217 KTVNIDK--DIIRFIKQNPEKSGIIYCLSRKKVEELAEILQANGIKARPYHAGMDSATRN 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 275 ANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDMPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYSNKDLQKLE--------KFMQGKPVSEQEIGKQL--LLETAAYAESSLCRRKVLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 385 YFGEEYTEDNCGN-CDNCLNP 404
>gi|282880882|ref|ZP_06289575.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
gi|281305264|gb|EFA97331.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
Length = 725
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 181/321 (56%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + K + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDVRAGRT--KLLYVAPESLNKEENIEFFKTVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + D P++ALTATA KV+ D+ SL + + KSSFNRPNL+YE+R
Sbjct: 157 PEYRNIRPTINKIGDAPVIALTATATDKVRTDIKRSLGIADAREFKSSFNRPNLYYEIRQ 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D + ++ + I+YCL R +ELS L A I A YHAGL+ RS
Sbjct: 217 KS--SDIDKQIIMFIRQHEGKSGIIYCLSRKKVEELSEVLKANNIKAAPYHAGLDSVTRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C +SCD C HP
Sbjct: 385 YFGEEYLQENC-HSCDNCLHP 404
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/316 (39%), Positives = 184/316 (58%), Gaps = 15/316 (4%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE L + + + +H RG + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 721 VQLLYVTPEMLGKSENMLRAFEGLHRRGKFARLVIDEAHCVSQWGHDFRPDYKNLGEIRQ 780
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQ--NP---LVLKSSFNRPNLFYEVRYKDLLDD 131
P VP++ALTATA +V++D M +L ++ NP V SFNR NL+YEVR K +
Sbjct: 781 RFPGVPLMALTATATTRVREDTMHNLGMEKNNPDKCQVFTQSFNRENLYYEVRPKPKGKE 840
Query: 132 AYADLCSVLK-ANGDTCAIVYCLERTTCDELSAYLS-AGGISCAAYHAGLNDKARSSVLD 189
+ + ++K ++ I+YCL R C++++ L I YHAGL +S V +
Sbjct: 841 GISAMADIIKDSHPRETGIIYCLSRANCEDIAKALQKTHKIRAQHYHAGLKGSEKSMVQE 900
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+W + R +V+VAT+AFGMGID+ +VR V H IPKS+E +YQE+GRAGRD PS+ L Y
Sbjct: 901 EWQAGRIKVIVATIAFGMGIDKSNVRFVIHHTIPKSLEGYYQETGRAGRDGNPSRCYLLY 960
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFG 308
G D ++ ++ +++ S+ + +M+ YCE S CRR ++L F
Sbjct: 961 GYGDAGKLRRMIDDPKNEGSREVKDMQHQM------LRKMIQYCENRSDCRRVQVLSYFN 1014
Query: 309 EQIPVSLCKNSCDACK 324
E+ + C CD C+
Sbjct: 1015 ERFDKADCHGGCDNCQ 1030
>gi|429741035|ref|ZP_19274704.1| ATP-dependent DNA helicase RecQ [Porphyromonas catoniae F0037]
gi|429159704|gb|EKY02201.1| ATP-dependent DNA helicase RecQ [Porphyromonas catoniae F0037]
Length = 725
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 186/321 (57%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + L+++ ++ A+DEAHCIS WGHDFR
Sbjct: 102 EVKQDVRAGRT--KLLYVAPESLHKQENIDLLREVP----ISFYAVDEAHCISEWGHDFR 155
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ SL + + PI+ALTATA PKVQ D+M++L +++ +V +SSFNRPNL Y++R
Sbjct: 156 PEYRKIRSLVSEIAPRPIMALTATATPKVQHDIMKNLGIEDAVVFQSSFNRPNLLYQIRP 215
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ + AN IVYC+ RT + L+ L A GI YHAGL K R
Sbjct: 216 KTA--DVDRDIVRYILANPKKSGIVYCMRRTRVETLAQVLQANGIKALPYHAGLEAKERM 273
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D +I R V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD
Sbjct: 274 ENQDAFIEERVDVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAGRDGGEGVC 333
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ YY ++ ++E +K +S Q + + DY E + CRR +L
Sbjct: 334 IAYYDPNELEKLER-FTKGRSVADQEIAR---------VLLRETADYAETTLCRRSFLLN 383
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C SCD C P
Sbjct: 384 YFGEHYEKENC-GSCDNCLVP 403
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 186/327 (56%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+KIY L P ++LLYVTPE + A+ MS L+ ++ R LL IDEAHC+S WGHD
Sbjct: 475 SKIYMQLSKKDPVIKLLYVTPEKVCASNRLMSTLENLYDRKLLARFVIDEAHCVSQWGHD 534
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD++ L + P V SFNR NL Y+V
Sbjct: 535 FRQDYKRLNMLRRKFGSVPMMALTATANPRVQKDILNQLEMLKPQVFTMSFNRHNLKYDV 594
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +A L G++ AYHAGL D
Sbjct: 595 LPKKPKKVALDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 654
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 655 RDLVQQKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEM 714
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 715 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVECRRV 767
Query: 302 KILESFGE-QIPVSLCKNS----CDAC 323
++L FGE + CK+ CD C
Sbjct: 768 QLLAYFGETNFNPTFCKDHPEVICDNC 794
>gi|434393955|ref|YP_007128902.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
gi|428265796|gb|AFZ31742.1| ATP-dependent DNA helicase RecQ [Gloeocapsa sp. PCC 7428]
Length = 602
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 194/323 (60%), Gaps = 16/323 (4%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLS 72
SGK ++LLY+ PE + F+ L +H + ++ AIDEAHC+S WGHDFRP YR+L
Sbjct: 107 SGK--VKLLYIAPERLLSEKFLPFLDLVHHQMGISAFAIDEAHCVSEWGHDFRPEYRQLQ 164
Query: 73 SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDA 132
LR+ VP +ALTATA +V++D+++ L L P V +SFNR NLFYEV+ K +
Sbjct: 165 QLRHRFSGVPTIALTATATERVRQDIIQQLGLVEPSVHIASFNRQNLFYEVQPKQ--KQS 222
Query: 133 YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
Y L +++ I+YCL R DE++ L GI+ YHAGL+D+ R++ +I
Sbjct: 223 YQQLLQLIRQQSG-AGIIYCLSRRRVDEIAFKLKNDGIAALPYHAGLSDRDRTANQTSFI 281
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
QV+VAT+AFGMGI++ DVR V H+++P+++E++YQESGRAGRD P++ L+
Sbjct: 282 RDDVQVMVATIAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRDGEPARCTLFLNYG 341
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D + +E+++++ Q + ++ Q++DY EG+ CRR L FGE+
Sbjct: 342 DIKTIEYLIAQKPDPQEQRIAKQQ---------LRQVIDYAEGTDCRRTIQLSYFGERFS 392
Query: 313 VSLCKNSCDACKHPNLLAKYLGE 335
C N CD C HP + + E
Sbjct: 393 -GKCDN-CDNCCHPKPMQDWTIE 413
>gi|389798157|ref|ZP_10201184.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 116-2]
gi|388445812|gb|EIM01870.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 116-2]
Length = 609
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 183/309 (59%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE T F L+ I + L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 108 LNLLYVAPERLLTSRFQGLLESIE----VALFAIDEAHCVSQWGHDFRPEYRELAILHQR 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P+ +++++E L LQ+ SSF+RPN+ Y V L +A L
Sbjct: 164 FPQVPRIALTATADPRTREEIVERLSLQHARQFVSSFDRPNIGYRV---GLRHNAKRQLG 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + IVYCL R D+ +A+L+ G+ YHAGL+ R+ ++
Sbjct: 221 EFLQGHQGESGIVYCLSRRKVDDTAAWLAESGVEALPYHAGLDAATRAKNQQRFLREDGV 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+++ + YG+ D M
Sbjct: 281 VMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTM 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E +GCRR+ +L +FGE P C
Sbjct: 341 SQMIAQSESADERKRVERQK--------LESLLAYAEATGCRRQLLLGAFGEVYP-GPCG 391
Query: 318 NSCDACKHP 326
+ CD C P
Sbjct: 392 H-CDNCLAP 399
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 191/332 (57%), Gaps = 11/332 (3%)
Query: 2 QVKTKIYEDLDSGKPSL--RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+V IY L +G P + L+VTPE L + S L ++++ L IDEAHC+
Sbjct: 301 EVVNAIYNSLRNGDPQTCPQFLFVTPEKLKHSEVLFSILHTLNNQSRLLRFVIDEAHCVC 360
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WG DFRP Y +L LR P+VPI+ALTATA + DV+ L + NP+V SF+RPN
Sbjct: 361 QWGFDFRPDYIQLCRLREKFPNVPIVALTATATRDILADVIRQLNMVNPVVFALSFDRPN 420
Query: 119 LFYEVRYKDLLDDA--YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
L YEVR K + + A ++ ++ + I+YCL R+ C+++ L GIS YH
Sbjct: 421 LRYEVRPK-IGNKAKLVKEVTEIISKFSHSTCIIYCLSRSECEDICKELIKNGISATYYH 479
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
+ D+ R+ W+S KQV+VATVAFGMGI++KDVRLV H ++PKS+E +YQESGRA
Sbjct: 480 GSMKDEKRNIAQKQWMSDEKQVMVATVAFGMGINKKDVRLVIHLSMPKSLENYYQESGRA 539
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKK---SISDFSQMVDYC 293
GRD + S +LYY D R++ + N +++ + S + S+ +V YC
Sbjct: 540 GRDGMESLCILYYSYKDVVRLQALTDINVENSNKKYRRNNDSKNRGDNSLHALLGIVKYC 599
Query: 294 EGS-GCRRKKILESFGEQIPVSLCKNSCDACK 324
E CRR IL FGE I LC+ CD C+
Sbjct: 600 EEQYECRRSIILRHFGE-IFGGLCRVQCDNCR 630
>gi|449516333|ref|XP_004165201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 586
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/320 (42%), Positives = 187/320 (58%), Gaps = 25/320 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
IY++L+ G+ S+++LYVTPE ++ + FMSKL+K + G L+L+AIDEAHC S WGHDFR
Sbjct: 172 IYKNLEKGEGSMKILYVTPEKVSKSKRFMSKLEKCYHAGRLSLIAIDEAHCCSQWGHDFR 231
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+ P++ALTATA +VQ D++E L + + S+ NRPNLFY VR
Sbjct: 232 PDYKNLGILKTQFPNAPVIALTATATQRVQNDLVEMLRIPKYVKFVSTVNRPNLFYMVRE 291
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K ++ D A+ N ++ I+YC R C++++ L GIS YHA ++
Sbjct: 292 KSSVSKVVIDQIAEFIQESYPNNES-GIIYCFSRKECEQVAKELRLRGISADHYHADMDS 350
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
AR V W +SR QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAGRD L
Sbjct: 351 VAREKVHMRWSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGL 410
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
PS+ LLYY D R ++ S + + +V YC+ CRR
Sbjct: 411 PSECLLYYRPGDVPRQSSMVFYENS---------------GLENLYGIVQYCQSRRQCRR 455
Query: 301 KKILESFGEQIPVSLCKNSC 320
F E P+ C N C
Sbjct: 456 SVFFRHFAE--PLKDC-NGC 472
>gi|281425296|ref|ZP_06256209.1| hypothetical protein HMPREF0971_02268 [Prevotella oris F0302]
gi|281400589|gb|EFB31420.1| ATP-dependent DNA helicase RecQ [Prevotella oris F0302]
Length = 725
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/321 (40%), Positives = 182/321 (56%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + L+ + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDVRSGRT--KLLYVAPESLNKEENVEFLQSVK----VSFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + PI+ALTATA KV+ D+ +SL + + KSSFNR NL+YEVR
Sbjct: 157 PEYRNIRPTINKIGTAPIIALTATATDKVRSDIKKSLGITDAKEFKSSFNRANLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D + ++ + I+YCL R +EL+ L A I A YHAGL+ RS
Sbjct: 217 K--TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ P C N CD C HP
Sbjct: 385 YFGEEYPHDNCHN-CDNCLHP 404
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 176/310 (56%), Gaps = 12/310 (3%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLYVTPE L+ + + ++H + IDEAHC+S WGHDFRP Y+++ +RN
Sbjct: 404 ITLLYVTPEMLSKSAAINNAFTRLHQSRRFARLVIDEAHCVSQWGHDFRPDYKEIGEVRN 463
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ D + +L ++ V SFNRPNL+YEVR K + A +
Sbjct: 464 RLPGVPVMALTATATENVKLDTIHNLGIKGCEVFTQSFNRPNLYYEVRMKGKGKNDLASI 523
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELS-AYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
S++K + I+YC R C+ ++ A S GI YHAG+ +++V +W +
Sbjct: 524 ASLIKDDHPKQTGIIYCFSRKDCENMANALQSQHGIKAHHYHAGMEGPEKANVQKEWQAG 583
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ +VR V H IPKS+E +YQE+GRAGRD PS L+YG D
Sbjct: 584 RYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYYQETGRAGRDGKPSSCYLFYGFGDA 643
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ + + + + Q R+ +M YC+ S CRR ++L F E+
Sbjct: 644 SKQKRFIDDGEGSHEQKERQRQM--------LKKMTQYCDNRSDCRRVQVLGYFSERFDP 695
Query: 314 SLCKNSCDAC 323
C CD C
Sbjct: 696 EDCDGGCDNC 705
>gi|340374034|ref|XP_003385544.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Amphimedon
queenslandica]
Length = 775
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/321 (42%), Positives = 181/321 (56%), Gaps = 25/321 (7%)
Query: 11 LDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
+D SL+L+YVTPE A + FMSKL K + G L+++ IDE HC S WGHDFRP Y+
Sbjct: 173 IDKSDRSLKLVYVTPEKIAKSKVFMSKLDKAYGLGRLSIIVIDEVHCASQWGHDFRPDYK 232
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR----- 124
L L+ P+ P+L LTATA KV D L L++ L+ K+S+NRPNLFYEV
Sbjct: 233 VLGILKRQFPNSPLLGLTATATSKVFSDCKNILNLRSCLIFKASYNRPNLFYEVHNKISS 292
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K+ +D + S K D IVYC + +++S L G IS YH G++ R
Sbjct: 293 QKEQVDTMIQLINSRFK---DQSGIVYCFSQKDAEQVSIALQTGSISATCYHGGMDAGDR 349
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ +W + QV+VATVAFGMGID+ +VR + H +I KSME +YQESGRAGRD P+
Sbjct: 350 TKAHTEWYDGKIQVIVATVAFGMGIDKSNVRFIMHHSISKSMENYYQESGRAGRDGQPAT 409
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKKI 303
+LYY + D R + SK+ + S+++ MV YC + CRR I
Sbjct: 410 CILYYKLADVFRQSTMSSKDFT---------------SVANLYPMVQYCIDAVQCRRALI 454
Query: 304 LESFGEQIPVSLCKNSCDACK 324
+ FGE S C CD CK
Sbjct: 455 AKHFGETWKQSDCNEMCDTCK 475
>gi|390953896|ref|YP_006417654.1| ATP-dependent DNA helicase RecQ [Aequorivita sublithincola DSM
14238]
gi|390419882|gb|AFL80639.1| ATP-dependent DNA helicase RecQ [Aequorivita sublithincola DSM
14238]
Length = 692
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 191/328 (58%), Gaps = 35/328 (10%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ ++L +G +L+LLYV PE F+ KI NL AIDEAHCISSWGHD
Sbjct: 100 QQQVLKELQNG--NLKLLYVAPESLPQLNFILNSIKI------NLFAIDEAHCISSWGHD 151
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP+Y +L SL+ P VP++ALTATA ++D+ L + N +SF+RPNL+ +V
Sbjct: 152 FRPAYTQLKSLKEQFPTVPLIALTATADRATREDIAAQLSIPNAKTFIASFDRPNLYLDV 211
Query: 124 R-----YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
R K +LD LK + D C I+YCL R + ++L+A LS+ G AYHAG
Sbjct: 212 RPGQNRNKQILD--------FLKIHRDECGIIYCLSRKSTEKLAATLSSKGYKAEAYHAG 263
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L + R+ + +++I+ ++VAT+AFGMGID+ +VR V H+N+PK+++ +YQE GR+GR
Sbjct: 264 LTSEERTQIQENFINDVSPIIVATIAFGMGIDKSNVRWVIHYNMPKNIDGYYQEIGRSGR 323
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LP+ ++L+Y D + + F+ + ++ +M + E C
Sbjct: 324 DGLPAHTILFYSFADVIML------------RKFAEGTETEAYQLAKLERMQQFAEALSC 371
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHP 326
RRK +L FGE I C N CD CK P
Sbjct: 372 RRKALLGYFGEHITED-CGN-CDICKTP 397
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178 [Arabidopsis thaliana]
Length = 1031
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 193/333 (57%), Gaps = 11/333 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I ++L S K +LLYVTPE A + + L+ ++SR LL IDEAHC+S WGHDF
Sbjct: 487 EILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDF 546
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 547 RPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 606
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + D+ ++ N D C I+YCL R C++++ L G A YH ++
Sbjct: 607 PKT--NKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGK 664
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 665 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 724
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSSK---KSISDFSQMVDYCEGS- 296
+LYY D R++ ++S+ Q + ++ + S + + + +MV YCE
Sbjct: 725 SCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENEV 784
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
CRR L GE+ + CKN+CD C +L
Sbjct: 785 DCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKIL 817
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 189/326 (57%), Gaps = 15/326 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I++ L +P L+LLY+TPE ++A+ +K +++R L IDE HC+S WGHDFR
Sbjct: 378 IFQKLHVREPILKLLYLTPEKMSASGKVTDMIKSLYARNKLARFVIDEVHCLSQWGHDFR 437
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y++LS+LR P+VPI+ LTATA +VQ DV L L+NP SFNRPN+ Y V
Sbjct: 438 PDYKQLSNLRKQYPEVPIICLTATATKQVQGDVTNILGLKNPKTFIRSFNRPNIKYRVIP 497
Query: 126 KDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K+ + ++ ++K I+YCL R C++L+ L GI AYHAG++D R
Sbjct: 498 KNGIK-VVEEITKLIKQRFYRKSGIIYCLCRADCEKLAEDLCKLGIKAKAYHAGMSDSIR 556
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+W+ + V+VAT+AFGMGID+ DVR V H ++PKS+EAFYQESGRAGRD PS
Sbjct: 557 EKQQREWMQDQFHVIVATIAFGMGIDKPDVRFVIHNSMPKSVEAFYQESGRAGRDGEPSY 616
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
S L+Y D R++ ++ ++ N + + QMV +CE CRR
Sbjct: 617 SYLFYSYADAGRLKRLMQMDRGVNKNALHGH-------YENLYQMVSFCENIVDCRRYLQ 669
Query: 304 LESFGEQIPVSLCKNS----CDACKH 325
L GE+ +C + CD C++
Sbjct: 670 LIHLGEKFDRKICMENKAMMCDNCEN 695
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 183/311 (58%), Gaps = 13/311 (4%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLYVTPE+ + +P FM+ L+ ++ + IDEAHC+S WGHDFRP Y+ L LR+
Sbjct: 881 IELLYVTPEMASKSPQFMNALQSLYRSRKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRS 940
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VP++ALTATA V D+ +L + N V SFNRPNL+YEVR K +
Sbjct: 941 KFPEVPVMALTATATQNVIVDIKHNLGMNNCQVFSQSFNRPNLYYEVRPKSSNPVVTQQI 1000
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+++ + + IVY + R ++++ LS GI+ YHA + + V W +
Sbjct: 1001 AALINSKYPNVTGIVYTISRKQAEDVAQKLSDNGITARHYHAAITPTEKVEVQTAWQKGQ 1060
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD PS +L+YG D R
Sbjct: 1061 VKVVVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKADIR 1120
Query: 256 RM-EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
+ + I+ + SK+ + ++ ++ +++ +C+ CRR ++L FGE
Sbjct: 1121 VLKKLIMDGDGSKDQK---------ERQMAMLNRVTAFCDNKADCRRTEVLRYFGEDFTP 1171
Query: 314 SLCKNSCDACK 324
S C +CD C+
Sbjct: 1172 SQCHKTCDNCQ 1182
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 193/328 (58%), Gaps = 10/328 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I + L+ RLLYVTPE A + + L+ +H R LL + IDEAHC+S WGH
Sbjct: 115 QRQILQQLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGH 174
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ PDVP++ALTATA +V++DV+++L L ++ + +FNRPNL Y
Sbjct: 175 DFRPDYQNLGILKQKFPDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYS 234
Query: 123 VRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K Y ++ + +K N I+YC + C+ + L G YHA ++
Sbjct: 235 VVPK--TKKVYEEIDAFIKENYPHESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDP 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ V W ++ ATVAFGMGI++ DVR V H +IPKS+E ++QESGRAGRD L
Sbjct: 293 QERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSS--KKSISDFSQMVDYCEGS 296
P+ +LYY D R++ +LS+ +Q+ +S++ + ++ K + + +M YCE
Sbjct: 353 PASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQLKTNFDNLQRMGAYCENE 412
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L FGE+ + CK++CD C
Sbjct: 413 VDCRRSLQLGHFGEKFDSASCKSTCDNC 440
>gi|357059803|ref|ZP_09120582.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
gi|355377445|gb|EHG24664.1| ATP-dependent DNA helicase RecQ [Alloprevotella rava F0323]
Length = 726
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 193/354 (54%), Gaps = 28/354 (7%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SGK +LLYV PE A ++ K I ++ A+DEAHCIS WGHDFRP YR
Sbjct: 107 DILSGKT--KLLYVAPESLAKREYVEFFKTIK----ISFYAVDEAHCISEWGHDFRPEYR 160
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
+ + + + PI+ALTATA KV+ D+ +SL +Q+ KSSFNR NL+YEVR K
Sbjct: 161 NIRVVIDEIERAPIIALTATATDKVRFDIKKSLAIQDAEEFKSSFNRANLYYEVRPK--T 218
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
+ ++ + ++ N I+YCL R T DEL+ L A I YHAGL RS D
Sbjct: 219 KEINKEIVTFIRQNAGKSGIIYCLSRKTVDELAKVLQANEIKAKPYHAGLEPDERSQTQD 278
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
++ V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD K + +Y
Sbjct: 279 LFLMQDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDDGEGKCITFY 338
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
DD +++E + K +ER + ++ Y E S CRRK +L FGE
Sbjct: 339 SPDDLKKLEKFMEKK--------GEQEREIGYLL--LAETAAYAESSICRRKLLLHYFGE 388
Query: 310 QIPVSLCKNSCDACKHPNLLAKYLGEL---------TSAVLQKNHFSQIFISSQ 354
+ C N CD C +P + EL T V + H I + ++
Sbjct: 389 EYLKDNCGN-CDNCLNPKKKVEAKEELEKVLNVILATKEVFRAEHIKDILMGNK 441
>gi|407035712|gb|EKE37810.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 774
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 185/316 (58%), Gaps = 15/316 (4%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
D+++ K ++++YV PEL + M++ +KK++ RGL + + IDEAHCIS WGHDFR SY
Sbjct: 469 DIETRK--IKIVYVAPELLSCSWKMNEAMKKLYDRGLFSYLVIDEAHCISQWGHDFRQSY 526
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
+L R P V + TATA +V+ D++ S+ L+ +V +FNRPNL YE R K
Sbjct: 527 VELREFRKTFPSVQTILFTATATERVKNDILLSMGLEEAIVFNQTFNRPNLRYETRVKS- 585
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
D+ ++ + + C IV+CL + C+ LS +L GI YHAGL+ K R V
Sbjct: 586 -PKVEVDIAHYIQQHPNQCGIVFCLSKKDCESLSKFLVNYGIRATHYHAGLDAKRRKKVQ 644
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
+DW++ VV ATVAFGMGID+ DVR V H +P S+E ++QE+GRAGRD PS ++Y
Sbjct: 645 NDWMNGTFLVVCATVAFGMGIDKPDVRFVIHQTMPSSIEQYFQEAGRAGRDGKPSDCIIY 704
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
+ M D R+E+ L ++ KN + S ++ + MV+ C S CRRK L F
Sbjct: 705 FNMKDISRVEW-LKRDMGKNELTSSQQQ--------SINAMVNLCITSECRRKIQLMYFD 755
Query: 309 EQIPVSLCKNSCDACK 324
E C CD C+
Sbjct: 756 ESFNEEKC-TGCDNCE 770
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 124/326 (38%), Positives = 184/326 (56%), Gaps = 13/326 (3%)
Query: 4 KTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
K ++ D P + LLYVTPE+ + +P FM+ L+ ++ + IDEAHC+S W
Sbjct: 891 KRQVMSAFDERNPEHFIELLYVTPEMASKSPQFMNALQNLYRNKKFARIVIDEAHCVSQW 950
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L LR P VP++ALTATA V D+ +L ++N V SFNRPNL+
Sbjct: 951 GHDFRPDYKTLGQLRAKFPQVPVMALTATATQNVIVDIKHNLRMKNCQVFSQSFNRPNLY 1010
Query: 121 YEVRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
YEVR K + +++KA + I+Y + R ++++ L GI+ YHA +
Sbjct: 1011 YEVRPKGSNPVVTQQIAALIKAKYPNVTGIIYTISRKQAEDVAQKLCEHGITARHYHAQI 1070
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ V W + +VVVAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD
Sbjct: 1071 TPSEKVEVQTAWQKGQIKVVVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAGRD 1130
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-C 298
PS +L+YG D R ++ ++ + N Q ++ + +++ +C+ C
Sbjct: 1131 GKPSDCILFYGKGDIRVLKKLILDGEGNNEQ--------KERQMVMLNRVTAFCDNKADC 1182
Query: 299 RRKKILESFGEQIPVSLCKNSCDACK 324
RR ++L FGE S C +CD C+
Sbjct: 1183 RRTEVLRYFGEDFSPSQCNKTCDNCQ 1208
>gi|422015295|ref|ZP_16361894.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
gi|414099460|gb|EKT61101.1| ATP-dependent DNA helicase RecQ [Providencia burhodogranariea DSM
19968]
Length = 608
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 190/323 (58%), Gaps = 27/323 (8%)
Query: 9 EDLDS-GKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
E +DS + +L+LLYV PE T F+S+L + + L+A+DEAHCIS WGHDFRP
Sbjct: 106 EVMDSCAQGNLKLLYVAPERLLTDYFLSQLANWN----IALLAVDEAHCISQWGHDFRPE 161
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RY 125
YR L LR + PDVP++ALTATA + D++ L L NPLV SSF+RPN+ Y + +Y
Sbjct: 162 YRALGQLRQHFPDVPVMALTATADETTRADIIRLLALDNPLVQVSSFDRPNIRYTLVEKY 221
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K L L +KA IVYC R +E + L G+S AAYHAGL+ + R
Sbjct: 222 KPL-----EQLWFFIKAQKGKAGIVYCNSRNKVEETAERLQKRGLSVAAYHAGLDSQQRE 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V D ++ Q+VVATVAFGMGI++ +VR V HF+IP+++EA+YQE+GRAGRD + +++
Sbjct: 277 WVQDAFLKDNLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEA 336
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+L+Y D + L + + Q ER +I+ F+ E CRR +L
Sbjct: 337 ILFYDPADMAWLRRCLEEKPAGVQQDI---ERHKLNAIAAFA------EAQTCRRLVLLN 387
Query: 306 SFGE--QIPVSLCKNSCDACKHP 326
FGE Q P C N CD C P
Sbjct: 388 YFGENRQTP---CGN-CDICLDP 406
>gi|332667951|ref|YP_004450739.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332336765|gb|AEE53866.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 713
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/327 (39%), Positives = 192/327 (58%), Gaps = 28/327 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ K+ E +G +L LLYV+PE + F+S LK RG +NL AIDEAHCIS+WGHD
Sbjct: 97 QLKVEESFYAG--ALNLLYVSPEKLVSGNFVSILK----RGKINLFAIDEAHCISAWGHD 150
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y ++ L+ + P VP++ALTATA +KD+++ L L+ P + +SF+RPNL EV
Sbjct: 151 FRPEYTQMGMLKQHFPQVPVIALTATADKLTRKDIVDQLKLEEPGIFIASFDRPNLSLEV 210
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R + ++ + I+YCL R T ++++A L+ G+ AYHAGL+
Sbjct: 211 RPGQ---QRLGQIQEFVQKHPKQAGIIYCLSRKTAEDVAAKLAQQGLKAEAYHAGLSPDR 267
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RS + D++I+ ++ ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD +
Sbjct: 268 RSKIQDNFINDNIHIICATVAFGMGIDKSNVRWVIHYNLPKNLEGYYQEIGRAGRDGAKA 327
Query: 244 KSLLYYGMDDRRRMEFIL--SKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+LL+Y D + I+ +N ++N ER M Y E CRR+
Sbjct: 328 DTLLFYSFADVSMLRDIIQNGENAAQNEIQLVKLER-----------MQQYAESLACRRR 376
Query: 302 KILESFGEQIPVSLCKN--SCDACKHP 326
+L F E +L KN +CD C++P
Sbjct: 377 ILLAYFSE----NLSKNCGNCDICRNP 399
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 244 bits (623), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 184/329 (55%), Gaps = 16/329 (4%)
Query: 2 QVKTKIYEDLDSGKPSL--RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
Q + +I+ P L +LLYVTPE L +P FM L +HS L + IDEAHC+S
Sbjct: 883 QKRNQIFSSFKERSPELFVQLLYVTPEMLNNSPSFMKALTTLHSGKRLARIVIDEAHCVS 942
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L LRN+ P VPI+ALTATA V D+ +L + N V SFNRPN
Sbjct: 943 QWGHDFRPDYKALGKLRNHFPTVPIIALTATATQNVIVDIKHNLGMDNCEVFCQSFNRPN 1002
Query: 119 LFYEVRYKDL-LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYH 176
L YEVR K+ L ADL + C I+Y L R T ++++ L GI YH
Sbjct: 1003 LTYEVRRKERELVHKIADL--IQSKYDQQCGIIYTLSRKTSEQVAEKLRDKYGILAHHYH 1060
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A ++ + R V W R VVVAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRA
Sbjct: 1061 AQMSPEDRIDVQRQWQKDRIHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRA 1120
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG- 295
GRD PS +LY+G D + +++ Q R+R+ +++ +C+
Sbjct: 1121 GRDGNPSDCILYFGYQDVVTLRKMIADGDGNEDQ--KERQRTM------LNRVTAFCDNR 1172
Query: 296 SGCRRKKILESFGEQIPVSLCKNSCDACK 324
CRR +IL FGE C +CD C+
Sbjct: 1173 ENCRRVEILRYFGEVFNGDECNKTCDNCR 1201
>gi|374594551|ref|ZP_09667555.1| ATP-dependent DNA helicase RecQ [Gillisia limnaea DSM 15749]
gi|373869190|gb|EHQ01188.1| ATP-dependent DNA helicase RecQ [Gillisia limnaea DSM 15749]
Length = 701
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 188/321 (58%), Gaps = 27/321 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I++ +D K L+LLYV PE L F+S G ++L+AIDEAHCISSWGHDFR
Sbjct: 100 IFQQIDENK--LKLLYVAPESLQVIDRFLSD-------GKVSLIAIDEAHCISSWGHDFR 150
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P+Y +L L+N P P++ALTATA +KD+ L + +SF+R NL EVR
Sbjct: 151 PAYTQLGYLKNRFPSTPLIALTATADKATRKDICNQLNIPGAKKHVASFDRKNLSLEVRP 210
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
D D +KA + I+YCL R ++++A L A G+ AYHAGL+ R+
Sbjct: 211 GTKRFDQIVDF---IKARKNESGIIYCLSRKNTEDIAAKLKANGLQAEAYHAGLSHLERT 267
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ DD+I+ KQ++ AT+AFGMGID+ ++R V H+N+PK++E +YQE GRAGRD LPS +
Sbjct: 268 KIQDDFINDTKQIICATIAFGMGIDKSNIRWVIHYNMPKNLEGYYQEIGRAGRDGLPSDT 327
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+L++ D ++ Q F+T + ++ +M Y E CRRK +L
Sbjct: 328 MLFHSYADVVQL------------QKFATNSGNEAVQLAKLDRMKQYSEALTCRRKILLN 375
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE + + C N CD C++P
Sbjct: 376 YFGE-LKIEDCGN-CDICRNP 394
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 193/333 (57%), Gaps = 11/333 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I ++L S K +LLYVTPE A + + L+ ++SR LL IDEAHC+S WGHDF
Sbjct: 550 EILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEAHCVSQWGHDF 609
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 610 RPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 669
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + D+ ++ N D C I+YCL R C++++ L G A YH ++
Sbjct: 670 PKT--NKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPGK 727
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 728 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 787
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSSK---KSISDFSQMVDYCEGS- 296
+LYY D R++ ++S+ Q + ++ + S + + + +MV YCE
Sbjct: 788 SCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENEV 847
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
CRR L GE+ + CKN+CD C +L
Sbjct: 848 DCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKIL 880
>gi|354604692|ref|ZP_09022681.1| ATP-dependent DNA helicase RecQ [Alistipes indistinctus YIT 12060]
gi|353347271|gb|EHB91547.1| ATP-dependent DNA helicase RecQ [Alistipes indistinctus YIT 12060]
Length = 730
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 192/322 (59%), Gaps = 20/322 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ D+ +GK +LLY PE +S L++I ++ AIDEAHCIS WGHDF
Sbjct: 104 AKVKSDVLAGKT--KLLYFAPESLTKEDNVSFLRQIK----ISFYAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNLFYEVR
Sbjct: 158 RPEYRRIRPIINDIGAAPLIALTATATPKVQMDIQKNLGMLDAAVFKSSFNRPNLFYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K +A ++ +K+N I+YCL R +EL+ L+A I A YHAG++ R
Sbjct: 218 SKT---NATKEIIRYIKSNPGKSGIIYCLSRKKVEELAELLAANSIKVAPYHAGMDAVTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
++ D +++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 AANQDAFLNEKVDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGGGH 334
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D +++E K Q E+ K + + V Y E S CRRK +L
Sbjct: 335 CLTFYSYKDIQKLE--------KFMQGKPLAEQEIGKLL--LQETVSYAESSICRRKTLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE+ P C N CD C HP
Sbjct: 385 HYFGEEYPEENC-NCCDNCLHP 405
>gi|296418818|ref|XP_002839022.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635016|emb|CAZ83213.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 183/320 (57%), Gaps = 17/320 (5%)
Query: 8 YEDLDSGKPSLRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ED++ ++LLY+TPE+ A M + L +H RG L + +DEAHC+S WGHDFRP
Sbjct: 118 HEDVEE---MVQLLYITPEMIAKSDKMVNTLLSLHRRGKLARIVVDEAHCVSQWGHDFRP 174
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--R 124
Y+ L +L++ P VP +ALTATA KV+ DV +L + SFNRPNL Y+V +
Sbjct: 175 DYKTLGNLKSKYPGVPWIALTATATEKVRMDVQLNLDMPRAKTFTQSFNRPNLNYQVSPK 234
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K++LDD ++C + T I+YCL R C++ + L GI +HA L +
Sbjct: 235 TKNVLDDI-VEICRRPEYLNKT-GIIYCLSRQNCEQTAEKLRTRGIRAQHFHAKLQADEK 292
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ +W + R V+VAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD LPS
Sbjct: 293 IRLQKEWQARRFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGLPSG 352
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
L+Y D + ++ + + Q ++ + +V YCE CRR ++
Sbjct: 353 CFLFYAYPDTSTLYRMIKDGEGSHDQ--------KRRQMEMLQMVVQYCENKAECRRVQV 404
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGE+ P C+ CD C
Sbjct: 405 LRYFGERFPEQECRGGCDNC 424
>gi|325954269|ref|YP_004237929.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
gi|323436887|gb|ADX67351.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
Length = 731
Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 128/304 (42%), Positives = 180/304 (59%), Gaps = 19/304 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ +D+ +GK ++LYV PE ++ K + ++ AIDEAHCIS WGHDFRP
Sbjct: 105 VMDDIRAGKT--KMLYVAPESLTKEEYIDFFKTVK----ISFFAIDEAHCISEWGHDFRP 158
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L S+ + + PI+ALTATA PKVQ+D+ ++L +Q+ V K SFNRPNLFYEVR K
Sbjct: 159 EYRNLKSIIQKIGNAPIIALTATATPKVQEDIQKTLGMQDARVFKDSFNRPNLFYEVRPK 218
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D ++ +K +VYCL R +EL+ L GI YHAGL+ K RS
Sbjct: 219 INQD---KEIVKFIKKRQGKSGVVYCLSRKKVEELTQLLQVNGIKAIPYHAGLDAKTRSK 275
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ VVVAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD + +
Sbjct: 276 HQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRAGRDGGEGECV 335
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
+Y D ++E L+ S+ + RE + +++ Y E S RRK +L
Sbjct: 336 AFYDYKDIEKLEKFLA------SKPVAEREI----GMQLLNEVAAYAETSMSRRKFLLHY 385
Query: 307 FGEQ 310
FGE+
Sbjct: 386 FGEE 389
>gi|343083870|ref|YP_004773165.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342352404|gb|AEL24934.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 709
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 193/329 (58%), Gaps = 20/329 (6%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPE--LTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
M + + Y + K ++LLYV PE + T ++ LK+++ L+LVA+DEAHC+S
Sbjct: 89 MDISEQRYVSDQAMKGGIKLLYVAPERLFSGTHPLVNALKEMN----LSLVAVDEAHCVS 144
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y KL +LR PD P LALTATA + +KD+ L L P SSF+RPN
Sbjct: 145 QWGHDFRPEYLKLGALRKAFPDTPFLALTATADKQTRKDISARLHLNKPEWFISSFDRPN 204
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
+ Y V L D + L L+ + IVYCL R + + +A L+A G S YHAG
Sbjct: 205 ITYRV---TLRSDGFGKLVDFLQHRPNDAGIVYCLSRKSVENTAAKLNANGFSALPYHAG 261
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L+ + R + +I +++VAT+AFGMGID+ +VR V H N+P+++E++YQE+GRAGR
Sbjct: 262 LSKENRQENQEKFIKDEVKIIVATIAFGMGIDKSNVRFVVHTNMPQNIESYYQETGRAGR 321
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LP ++LL+Y + D ++ ++ +S +++ + R +K MV +C+ C
Sbjct: 322 DGLPGEALLFYSLGDSITLKRMI---ESADNEEY-VRHMKAK-----MDTMVAFCQTKSC 372
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPN 327
RRK +L FGE+ C N CD C N
Sbjct: 373 RRKYLLGYFGEKYSQD-CGN-CDVCFQKN 399
>gi|392969325|ref|ZP_10334740.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387841519|emb|CCH56798.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 736
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 127/304 (41%), Positives = 187/304 (61%), Gaps = 19/304 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ +D SG SL+LLY+ PE + LKK + ++ VAIDEAHCIS WGHDFR
Sbjct: 105 KVKKDTLSG--SLKLLYIAPESLTKEENLDFLKKAN----ISFVAIDEAHCISEWGHDFR 158
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRK+ + + + ++P++ALTATA PKVQ+D+ ++L +++ + KSSFNR NL+YE++
Sbjct: 159 PEYRKIRGIVDNIGNLPVIALTATATPKVQQDIQKNLQMEDANLYKSSFNRKNLYYEIKP 218
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K DA L +K N IVYCL R T ++++ L+ I YHAGL+ R
Sbjct: 219 KI---DAKKQLIKYVKQNKGKSGIVYCLSRKTVEDIAELLNVNDIKALPYHAGLDPLTRM 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D +++ V+VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L
Sbjct: 276 NNQDAFLNEEVDVIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+++Y DD ++E K ++ ER + K + ++MV Y CRR+++L
Sbjct: 336 VMFYSYDDIVKLE--------KFNKDKPVTERDNAKHL--LTEMVSYANLGVCRRRQLLS 385
Query: 306 SFGE 309
FGE
Sbjct: 386 YFGE 389
>gi|325284946|ref|YP_004260736.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
gi|324320400|gb|ADY27865.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
Length = 733
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 186/312 (59%), Gaps = 24/312 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QVK ++ ED+ +G +LLYV PE ++ L+ + ++ VA+DEAHCIS WG
Sbjct: 101 QVK-EVKEDIVNG--VTKLLYVAPESLIKEEYVEFLRSVK----ISFVAVDEAHCISEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
HDFRP YR L ++ L D +P++ LTATA PKVQ+D++++L + + + K+SFNRPNLF
Sbjct: 154 HDFRPEYRNLKTIVGKLGDNIPMIGLTATATPKVQEDIVKNLGIADAKLFKASFNRPNLF 213
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YEVR K + AD+ +K N IVYCL R +EL+ L GIS YHAG +
Sbjct: 214 YEVRPK--TQNIEADIIRFVKQNVGKSGIVYCLSRKKVEELAQVLQVNGISAVPYHAGFD 271
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
K RS D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 272 AKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDG 331
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGC 298
L +Y D ++E F + + +++ I + ++V + E S
Sbjct: 332 GEGHCLAFYSYKDIEKLE------------KFMSGKPVAEQEIGNALLQEVVAFAETSMS 379
Query: 299 RRKKILESFGEQ 310
RRK IL FGE+
Sbjct: 380 RRKFILHYFGEE 391
>gi|241952456|ref|XP_002418950.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
gi|223642289|emb|CAX44258.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1164
Score = 244 bits (622), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 191/314 (60%), Gaps = 14/314 (4%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE + K + ++++ L V IDEAHC+SSWGHDFRP Y+ L ++
Sbjct: 535 LDIVYLSPEKANKSSLIQKIMTQLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKD 594
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK--DLLDDAYA 134
P VPI+ALTATA KV+ D++ +L + NP++LK SFNR NLFYE+++K + L +
Sbjct: 595 KFPKVPIMALTATANEKVRMDILHNLKMDNPVLLKQSFNRTNLFYEIKWKSGNYLLEIKD 654
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ S K I+YC + +C++ S L+ G+ + YHAG++ +R ++ W S
Sbjct: 655 YILSRFKGK---TGIIYCHSKQSCEQTSMKLNEYGLKTSFYHAGMSADSRFNIQKRWQES 711
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ QV+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S+ ++YY D
Sbjct: 712 KIQVICATIAFGMGIDKPDVRFVIHLFLPRTLEGYYQETGRAGRDGNYSECVMYYSYKDA 771
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ +++ E + ++ Q+V YCE + CRRK++L+ F E
Sbjct: 772 RSLQSLIQRDE-------ELSELGKENHLAKLRQVVQYCENTTDCRRKQVLQYFNETFDP 824
Query: 314 SLCKNSCDACKHPN 327
CK CD C++ N
Sbjct: 825 VNCKKQCDNCRNYN 838
>gi|68060631|ref|XP_672302.1| DNA helicase [Plasmodium berghei strain ANKA]
gi|56489255|emb|CAI03043.1| DNA helicase, putative [Plasmodium berghei]
Length = 376
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 185/320 (57%), Gaps = 21/320 (6%)
Query: 11 LDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRK 70
L S ++++LY+TPE +P F+S L++++ G ++L++IDE HCIS+WG DFR SYR
Sbjct: 51 LRSFNENIKVLYITPETATSPQFISILEELYLNGKISLISIDEVHCISTWGCDFRKSYRH 110
Query: 71 LSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPL------------------VLKS 112
LS L N P V I + TATA V++D++ +L + ++ +
Sbjct: 111 LSKLLNTCPYVRIYSCTATATKHVERDIITNLGFHDSNNNKNDNDKETINIYKGLRIVST 170
Query: 113 SFNRPNLFYEVRYKDLLD-DAYADLCSVL--KANGDTCAIVYCLERTTCDELSAYLSAGG 169
SFNRPN+ Y + Y DLL D +C ++ K N I+YC +R TCD +S YL G
Sbjct: 171 SFNRPNIKYIIIYSDLLKIDKKESICDIVREKRNERKTGIIYCFKRKTCDMISKYLRENG 230
Query: 170 ISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAF 229
I +YHAGL + AR + + WI+ +++VAT+AFGMGIDRKDV + HFN+PKS+E +
Sbjct: 231 IQSLSYHAGLTNNARKQIQEKWINGTIKILVATIAFGMGIDRKDVSYIIHFNLPKSIENY 290
Query: 230 YQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQM 289
YQESGRAGR+ + LYY +D ++ FI+ S E+ +K + + +
Sbjct: 291 YQESGRAGRNGNIAFCYLYYSKEDVEKLAFIIKGCYSNLDAYNPNMEKKFEKEMHNLECV 350
Query: 290 VDYCEGSGCRRKKILESFGE 309
+ C C R +IL FGE
Sbjct: 351 HNLCITQKCIRTQILNYFGE 370
>gi|293332763|ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
gi|223974195|gb|ACN31285.1| unknown [Zea mays]
Length = 710
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 184/328 (56%), Gaps = 24/328 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
+V+ IY+ LD G+ L++LYVTPE ++ + FMSKL+K H G L+L+AIDEAHC S W
Sbjct: 166 EVEKFIYKTLDKGEGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLIAIDEAHCCSQW 225
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L L+ P VP++ALTATA KVQ D+ME L + + S+ NRPNLF
Sbjct: 226 GHDFRPDYKNLGILKIQFPSVPMIALTATATSKVQMDLMEMLHIPRCIKFVSTVNRPNLF 285
Query: 121 YEVRYKDLLDDAYADLCSVLKAN---GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
Y+V K + D + + + I+YC R C++++ L GIS YHA
Sbjct: 286 YKVSEKSPVGKVVIDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYHA 345
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
++ R + W + QV+V TVAFGMGI++ DVR V H ++ KSME +YQESGRAG
Sbjct: 346 DMDIVNREKIHMRWSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAG 405
Query: 238 RDQLPSKSLLYYGMDD-RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
RD LPS+ +LYY D R+ + +N + + +V YC+
Sbjct: 406 RDGLPSECILYYRPGDVPRQSSMVFYENC----------------GLQNLYDIVRYCQSK 449
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CR FGE +P C CD C
Sbjct: 450 RSCRHGAFFRHFGE-VPQD-CNGMCDNC 475
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 182/310 (58%), Gaps = 12/310 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + + L+K++ R L + IDEAHC+S WGHDFRP Y++L +RN
Sbjct: 811 IELLYITPEMINKSQALIQSLEKLNKRHRLARIVIDEAHCVSQWGHDFRPDYKELGEIRN 870
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ D + +L ++ + SFNRPNL YEVR K + +
Sbjct: 871 RLPGVPMIALTATATENVKVDTIHNLKMEGCEIFTQSFNRPNLTYEVRQKGKSSEVMDSI 930
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+ +K + + IVYCL R C+ ++ L++ I YHAG+ R+ V + W +
Sbjct: 931 ANTIKTSYPNKSGIVYCLSRKACESVAEILASKYKIKADFYHAGVASAKRAEVQERWQTG 990
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 991 RVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDY 1050
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGEQIPV 313
++ ++ K + N Q TR+R +++ + YC + CRR +IL F E
Sbjct: 1051 TSLQSMIDKGEGSNEQ--KTRQRQMLRNV------MQYCLNPADCRRVQILAYFNEYFRQ 1102
Query: 314 SLCKNSCDAC 323
+ C SCD C
Sbjct: 1103 ADCNRSCDVC 1112
>gi|189462225|ref|ZP_03011010.1| hypothetical protein BACCOP_02908 [Bacteroides coprocola DSM 17136]
gi|189431078|gb|EDV00063.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 727
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 144/382 (37%), Positives = 206/382 (53%), Gaps = 30/382 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + LK + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVKSDILAGKT--KLLYVAPESLTKEENVDFLKHVK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKV+ D+ ++L + KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPVIALTATATPKVKMDIQKNLGMVGATEFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K ++ D+ +K N + I+YCL R +EL+ L A GI YHAG++ R+
Sbjct: 217 K--TNNVDKDIIRFIKQNPEKSGIIYCLSRKKVEELAEILQANGIKARPYHAGMDSATRN 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ +V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 ANQDAFLKEDIEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGMC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYSNKDLQKLE--------KFMQGKPISEQEIGKQL--LLETAAYAESSLCRRKILLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNLLAKYLGEL----TSAVLQKNHFSQIFISSQDMTDGGQ 361
FGE+ C N CD C +P + L + + K +F Q +I D+ G +
Sbjct: 385 YFGEEYTEDNCGN-CDNCLNPKKQVEAQDSLCAVIETIIAVKENFKQDYIV--DILLGKE 441
Query: 362 YSEFWNRDDE-----ASGSEED 378
SE E SG ED
Sbjct: 442 TSEVLAHKHEDLEVFGSGMGED 463
>gi|333381389|ref|ZP_08473071.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
gi|332830359|gb|EGK02987.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
Length = 731
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 148/381 (38%), Positives = 213/381 (55%), Gaps = 29/381 (7%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SGK +LLYV PE + L++I ++ AIDEAHCIS WGHDFRP YR
Sbjct: 108 DILSGKT--KLLYVAPESLTKEENIDFLRQIK----ISFYAIDEAHCISEWGHDFRPEYR 161
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
++ + + PI+ALTATA PKVQ D+ ++L + + V K+SFNR NLFYEVR K
Sbjct: 162 RIRPIVTEIGKHPIIALTATATPKVQLDIQKNLGMVDADVFKASFNRENLFYEVRSK--T 219
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
++ D+ +K+ G I+YCL R +E + L I+ YHAGL+ RS+ D
Sbjct: 220 NNVDKDIIKYIKSQGHKSGIIYCLSRKKVEEFAEILQTNNINALPYHAGLDANTRSANQD 279
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
++ + V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD K + +Y
Sbjct: 280 AFLMEQVDVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAGRDGGEGKCIAFY 339
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D +++E K Q E+ K + + Y E + CR+K +L FGE
Sbjct: 340 SFKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETALCRKKVLLHYFGE 389
Query: 310 QIPVSLCKNSCDACKHP--NLLAK--YLGELTSAVLQKNHFSQIFISSQDMTDGGQYSE- 364
+ V C N CD C +P + AK L L + V K F ++ ++ G + SE
Sbjct: 390 EYKVRNCGN-CDNCVNPKKQVEAKDLLLTALEAVVALKEKFKTDYVI--NILRGKETSEI 446
Query: 365 --FWNRDDEASGSEEDISDCD 383
+ ++D E GS +D SD D
Sbjct: 447 ETYEHQDLEVFGSGDD-SDED 466
>gi|392373492|ref|YP_003205325.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
gi|258591185|emb|CBE67480.1| ATP-dependent DNA helicase RecQ [Candidatus Methylomirabilis
oxyfera]
Length = 622
Score = 243 bits (621), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 130/304 (42%), Positives = 168/304 (55%), Gaps = 19/304 (6%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
LLYV PE P + LK+ + AIDEAHCIS WGHDFRP YR+L +R P
Sbjct: 109 LLYVAPERLVFPPCLRLLKQAG----VAFFAIDEAHCISQWGHDFRPEYRQLKVVREAFP 164
Query: 80 DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 139
DV I A TATA P+V+ D+ L L+ P +L SF+RPNL Y VR + D +
Sbjct: 165 DVAIHAFTATATPRVRADIATELALREPEILVGSFDRPNLVYRVRRRT---DRLQQVTEA 221
Query: 140 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVV 199
L+ + T I+YC+ R D+L+ L G AYHAGL D R DD+I+ R VV
Sbjct: 222 LERHRGTAGIIYCIRRAEVDQLTDALRRRGYRAVAYHAGLADAERRRTQDDFIAERADVV 281
Query: 200 VATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEF 259
VATVAFGMGIDR DVR V H +PKS+E + QE+GRAGRD LPS+ LL Y D
Sbjct: 282 VATVAFGMGIDRSDVRYVIHAGMPKSIEHYQQEAGRAGRDGLPSECLLLYSGGDFGLWRS 341
Query: 260 ILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNS 319
IL + ++ S+M +YC+G+ CR + ++ FG+ C +
Sbjct: 342 ILMAEGL-----------PAPGALPKLSEMYNYCQGAACRHRFLVNYFGQAYRTDTC-GA 389
Query: 320 CDAC 323
CD C
Sbjct: 390 CDIC 393
>gi|404485707|ref|ZP_11020904.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
gi|404338395|gb|EJZ64842.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
Length = 726
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 187/325 (57%), Gaps = 23/325 (7%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QVKT D+ SGK +LLYV PE + LK+++ ++ A+DEAHCIS WG
Sbjct: 103 QVKT----DILSGKT--KLLYVAPESLTKEENIDFLKQVN----VSFYAVDEAHCISEWG 152
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR++ + N + P++ALTATA PKVQ D+ ++L + V KSSFNRPNL+Y
Sbjct: 153 HDFRPEYRRIRPIINEIGVRPVIALTATATPKVQHDIQKNLGMLEATVFKSSFNRPNLYY 212
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K D D+ +K+ I+YCL R +EL+ L GI YHAG++
Sbjct: 213 EVRPKTANIDK--DIIKYIKSQEGKSGIIYCLSRKKVEELAELLQVNGIRALPYHAGMDS 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+ D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 271 ATRTQNQDAFLLEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+ + +Y D +++E K Q E+ K + + Y E S CRRK
Sbjct: 331 EGQCITFYINKDLQKLE--------KFMQGKPIAEQEIGKQL--LLETAAYAESSLCRRK 380
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+L FGE+ C N CD C +P
Sbjct: 381 ILLHYFGEEYEEDNCGN-CDNCLNP 404
>gi|429740154|ref|ZP_19273860.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
gi|429154163|gb|EKX96911.1| ATP-dependent DNA helicase RecQ [Prevotella saccharolytica F0055]
Length = 725
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 137/322 (42%), Positives = 183/322 (56%), Gaps = 21/322 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ K +LLYV PE + + LK I ++ AIDEAHCIS WGHDFR
Sbjct: 103 EVMEDVRQRKT--KLLYVAPESLSKEENIEFLKTIK----VSFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + + PI+ALTATA KV+ D+ ++L + + KSSFNR NL+YEVR
Sbjct: 157 PEYRNIRPTIMKIGKAPIIALTATATDKVRSDIKKNLGISDAKEFKSSFNRVNLYYEVRS 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D ++ +K + D I+YCL R +EL+A L A I A YHAGL+ RS
Sbjct: 217 K--TQDVDRNIIMFIKQHADKSGIIYCLSRKKVEELAAVLQANNIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLC 334
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+ +Y D R++E FI K S E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYSNQDLRKLEKFIDGK---------SGAEQDIGRQL--LLETAAYAESSVCRRKMLL 383
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C HP
Sbjct: 384 HYFGEEYTEENCHN-CDNCLHP 404
>gi|154324014|ref|XP_001561321.1| hypothetical protein BC1G_00406 [Botryotinia fuckeliana B05.10]
Length = 1677
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 184/330 (55%), Gaps = 17/330 (5%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ + +++ L+ KP + LLYVTPE+ + SKL ++++ L + IDEAHC+S
Sbjct: 893 ETRQQLFNGLNERKPEQFVELLYVTPEMINKSNAIQSKLDDLYAKKRLARIVIDEAHCVS 952
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L LR P VP +ALTATA +V+KDV+ +L +QN LK SFNRPN
Sbjct: 953 QWGHDFRPDYKNLHELRGRYPGVPFIALTATATERVKKDVIHNLGMQNCEQLKQSFNRPN 1012
Query: 119 LFYEVRYKDLLDDAYADLCSVLKA----NGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
++YEVR K A + K + I+YCL R C+E++ L GI
Sbjct: 1013 IYYEVRRKTGKGSTAAMFSEITKMLSVDYKNQSGIIYCLSRDNCEEVAKKLREQGIRAHH 1072
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
+HA + + + W QVVVAT+AFGMGID+++VR V H+ +PK++E +YQE+G
Sbjct: 1073 FHAHMTPEEKKDTQHKWQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETG 1132
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD P+ LYYG D + + ++ K + T +R MV +C+
Sbjct: 1133 RAGRDGKPAACFLYYGFQDSQIYKKMIEKGEG--GPDVKTEQRQM------LEAMVRFCD 1184
Query: 295 GS-GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR ++L FGE C N CD C
Sbjct: 1185 NRIDCRRVQLLRYFGETFRREDCGN-CDTC 1213
>gi|406883341|gb|EKD30951.1| hypothetical protein ACD_77C00439G0002 [uncultured bacterium]
Length = 733
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 188/321 (58%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ EDL SG+ +LLYV PE ++ LK++ ++ A+DEAHCIS WGHDFR
Sbjct: 105 EVKEDLMSGQT--KLLYVAPESLTKEENIAFLKQL----TISFYAVDEAHCISEWGHDFR 158
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + + P++ALTATA PKVQ D+ ++L + + +V K+SFNRPNL+YE+R+
Sbjct: 159 PEYRRIYPIVQEIGKAPVIALTATATPKVQNDIQKNLGMSDAMVFKTSFNRPNLYYEIRH 218
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + ++ +KAN I+YCL R ++++ L GI YHAGL+ R+
Sbjct: 219 KA---NTEREIIRFIKANEGKSGIIYCLSRKKVEDVAQLLVVNGIKALPYHAGLDAYTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
S D ++ V+VAT+AFGMGID+ DVR V H++IPKS+E++YQE+GR+GRD +
Sbjct: 276 SNQDSFLMEGVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRSGRDGGEGQC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ + + + V Y E S CRRK +L
Sbjct: 336 IAFYSYKDIQKLE--------KFMQGKPISEQEIGRQL--LMETVSYAESSICRRKVLLN 385
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C CD C P
Sbjct: 386 YFGEDYKQDNC-GCCDNCLFP 405
>gi|374598547|ref|ZP_09671549.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|423323213|ref|ZP_17301055.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
gi|373910017|gb|EHQ41866.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|404609764|gb|EKB09128.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
Length = 731
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 184/305 (60%), Gaps = 18/305 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ G +LLYV PE +++ L+++ L+ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKEDIKQG--ITKLLYVAPESLTKEEYVNFLQEVK----LSFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L D+PI+ LTATA PKVQ+D++++L + N V K+SFNRPNL+YE++
Sbjct: 158 PEYRNLRNIIRQLGDIPIIGLTATATPKVQEDILKNLEIPNANVFKASFNRPNLYYEIKP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K ++YCL R +E++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNIESDIIRFIKQRKGKSGVIYCLSRKKVEEIANVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAGRDGGEGWC 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L YY D ++E ++ + + +E I+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDIEKLEKFMA------GKPIAEQEI----GIALLQEVVAYAETSMSRRKFLLH 385
Query: 306 SFGEQ 310
FGE+
Sbjct: 386 YFGEE 390
>gi|90407207|ref|ZP_01215394.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
gi|90311630|gb|EAS39728.1| putative ATP-dependent DNA helicase RecQ [Psychromonas sp. CNPT3]
Length = 602
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 187/325 (57%), Gaps = 24/325 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +I D+ GK L+LLY+ PE FM +LK + +NL AIDEAHCIS WGHD
Sbjct: 100 QNQILNDMHQGK--LKLLYIAPERLLRHDFMQRLKTL----TINLFAIDEAHCISQWGHD 153
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y L L+ + P VP++ALTATA QKD++ L +PL+ SF+RPN+ Y +
Sbjct: 154 FRPEYALLGQLKIHFPQVPLVALTATADHATQKDILARLQFNDPLLSIHSFDRPNIEYLL 213
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+Y+ L+ L + L + I+YC R +E++ L G++ YHAGL
Sbjct: 214 IEKYRPLIQ-----LFNYLAEHQHESGIIYCTSRRRTEEIAQKLQGKGLNARCYHAGLEL 268
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R V D +I +VVATVAFGMGID+ +VR V H+ IPK++E++YQE+GRAGRD L
Sbjct: 269 SERQLVQDKFIKDEVDIVVATVAFGMGIDKPNVRFVVHYEIPKNIESYYQETGRAGRDGL 328
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
P++++L+Y D R+ +L KN++ E + + + MV + E CRR+
Sbjct: 329 PAQAMLFYDPADPARVRAMLEKNEN---------EEQRRIELHKLNTMVAFAEAQTCRRQ 379
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+L FGE + C N CD C P
Sbjct: 380 VLLNYFGE-YSRNACGN-CDICLDP 402
>gi|427722202|ref|YP_007069479.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
gi|427353922|gb|AFY36645.1| ATP-dependent DNA helicase RecQ [Leptolyngbya sp. PCC 7376]
Length = 715
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 184/325 (56%), Gaps = 16/325 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q +++I L+ GK ++LLYV PE GF L + L+ +DEAHC+S WG
Sbjct: 97 QARSRIQAILN-GK--IKLLYVAPERLFNEGFQEFLNDVTDSVGLSGFVVDEAHCVSEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L+ LR P VP A TATA +V++D++ L L P +SFNRPNL+Y
Sbjct: 154 HDFRPEYRQLARLRRNYPQVPCHAFTATATERVRQDIITQLALHTPSFHCTSFNRPNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EV K +Y + + + I+YC R DE+S L GI+ YHAG++D
Sbjct: 214 EVIPKS--SRSYDQVLKYTRKHRGKSGIIYCSSRKKVDEISDRLKNDGINALPYHAGMSD 271
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
KAR+S D +I V+VAT+AFGMGI++ DVR V H+++P ++E +YQESGRAGRD
Sbjct: 272 KARASHQDQFIRDDVPVIVATIAFGMGINKPDVRFVLHYDLPGNLERYYQESGRAGRDNE 331
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
P+ L Y + D ++ E+ + E+ + + +M+DY EG CRR
Sbjct: 332 PADCALLYSVGDIKKAEYFI---------ELKDDEQEKRVAYQQLQKMIDYAEGIECRRT 382
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
L FGE V C +CD CK+P
Sbjct: 383 IQLSYFGESF-VGNC-GTCDNCKNP 405
>gi|156359349|ref|XP_001624732.1| predicted protein [Nematostella vectensis]
gi|156211530|gb|EDO32632.1| predicted protein [Nematostella vectensis]
Length = 582
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/323 (42%), Positives = 189/323 (58%), Gaps = 22/323 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ + K L++LYVTPE A + FM+KL+K + GLL+ + IDE HC S WGHDFR
Sbjct: 171 VHASIVDKKSDLKMLYVTPEKIAKSKRFMAKLEKSYESGLLSRIVIDEVHCTSQWGHDFR 230
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ-NPLVLKSSFNRPNLFYEVR 124
P Y+ L L+ P VPIL LTATA KV +DV + L L N L+LK+SFNRPNLFYEV+
Sbjct: 231 PDYKILGILKRQYPGVPILGLTATATTKVIEDVKKILGLHANCLLLKASFNRPNLFYEVQ 290
Query: 125 YKDLLDDAYADLCSVL---KANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K + A+ L + +GD+ I+YC R ++++ +S+ GI A YHA +
Sbjct: 291 SKPTTNSAFMSTIHQLITKRFSGDS-GIIYCFSRKDAEQVAIEMSSRGIKAACYHADMPP 349
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
++RS V W +++ QVVVATVAFGMGID+ +VR V H + KSME +YQESGRAGRD+
Sbjct: 350 ESRSQVHMAWTTNKLQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGRDEK 409
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRR 300
+ +++Y D R ST + + + + +V YC+ G CRR
Sbjct: 410 RASCIVFYRPFDIFR---------------HSTMVFTEQTGLQNLYGIVRYCQQQGVCRR 454
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
I FGE + CK CD C
Sbjct: 455 TLIGRHFGEGWDPAQCKQMCDNC 477
>gi|321475158|gb|EFX86121.1| RecQ1-like protein [Daphnia pulex]
Length = 624
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 195/363 (53%), Gaps = 23/363 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ + K SL+LLYVTPE L + FM+KL+K++ VA+DE HC S WGHDFR
Sbjct: 163 VHLAMTDAKSSLKLLYVTPEKLAKSKRFMTKLQKMYQIKRFACVAVDEVHCCSQWGHDFR 222
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L LR+ P VPI+ LTATA V DV + L ++N LV K+SFNRPNL+YEVR
Sbjct: 223 PDYKYLGVLRSLFPTVPIVGLTATATLNVTNDVQKMLNMKNSLVFKASFNRPNLYYEVRI 282
Query: 126 KDLLDDAYADLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D L N I+Y CD+L++ L A+YHA L
Sbjct: 283 KPSTQKECIDELVQLLTNRFHGQSGIIYTTSVKDCDQLASELRQQKCRVASYHASLEPAD 342
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ V W +R Q VVAT+AFGMGID+ DVR V H +I KSME FYQESGRAGRD L +
Sbjct: 343 RTEVHTGWRENRYQAVVATIAFGMGIDKPDVRFVIHHSISKSMENFYQESGRAGRDDLQA 402
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKK 302
++Y+ + D R+ ++ Q+ + + M YC + CRR+
Sbjct: 403 CCIVYWRLSDLFRLSTMVFTEQT---------------GLRNLYAMAAYCLDPERCRREI 447
Query: 303 ILESFGEQIPVSLCKNSCDACKHPNLLAK--YLGELTS--AVLQKNHFSQIFISSQDMTD 358
I F E+ S C CD C + A+ + LT+ +L++ Q+ +++Q + D
Sbjct: 448 IASHFDERWESSSCNKMCDHCSKDSTSAEINIVEHLTTLRQILERAEEQQVRVTAQKLID 507
Query: 359 GGQ 361
Q
Sbjct: 508 AWQ 510
>gi|375255218|ref|YP_005014385.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
gi|363408301|gb|AEW21987.1| ATP-dependent DNA helicase RecQ [Tannerella forsythia ATCC 43037]
Length = 786
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/327 (40%), Positives = 191/327 (58%), Gaps = 25/327 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATP--GFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++ +D+ SGK +LLYV PE LT GF+ ++K ++ A+DEAHCIS WGH
Sbjct: 162 QVKQDILSGKT--KLLYVAPESLTKEENIGFLRQVK-------ISFYAVDEAHCISEWGH 212
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNR NL+YE
Sbjct: 213 DFRPEYRRIRPIINEIGKRPLIALTATATPKVQHDIQKNLGMMDAKVFKSSFNRANLYYE 272
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
+R K D ++ +KAN I+YCL R +E + L A GI YHAG++ +
Sbjct: 273 IRPKG--KDIDREIIKYIKANEGKSGIIYCLSRKKVEEFADILCANGIKALPYHAGMDSQ 330
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+ D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 331 QRSANQDAFLMEKTDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGE 390
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
+ + +Y D +++E L Q E+ K + + Y E + CRRK
Sbjct: 391 GQCVAFYANKDLQKLEKFL--------QGKPIVEQEIGKQL--LLETAAYAETAVCRRKV 440
Query: 303 ILESFGEQIPVSLCKNSCDACKHPNLL 329
+L FGE+ C CD C +P L
Sbjct: 441 LLHYFGEEYFEENC-GCCDNCLNPKTL 466
>gi|85858064|ref|YP_460266.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
gi|85721155|gb|ABC76098.1| superfamily II DNA helicase [Syntrophus aciditrophicus SB]
Length = 619
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 189/324 (58%), Gaps = 20/324 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K+ L GK L L+Y+ PE + F+ +L I + L AIDEAHCIS WGHDFR
Sbjct: 98 KVLARLHGGK--LDLIYIAPERLMSREFLERLNDIP----IALFAIDEAHCISQWGHDFR 151
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR+L LR P++P++ALTATA ++D++E L L+ S F+RPN+ Y V
Sbjct: 152 PEYRQLGRLRGLFPEIPLIALTATAEAHTRRDILERLGLRQARSYISGFDRPNIRYTVLE 211
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +A L + L+ IVYCL R ++++ L+ G A YHAGL AR
Sbjct: 212 KR---KPFAQLTTFLQPRYKGTGIVYCLSRQRVEKVAGALTEAGFQAAPYHAGLPAGARK 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V +D++ +++VATVAFGMGID+ ++R V H++IPK++E++YQE+GRAGRD LP+++
Sbjct: 269 QVQEDFLRDDIRIIVATVAFGMGIDKSNIRWVVHYDIPKNIESYYQETGRAGRDGLPAEA 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL +G D L++ +NS++ R + + + MV Y E CRR+ +L
Sbjct: 329 LLLFGYGD-----ISLARGLIENSKNPERR----RIELHKLNAMVGYAEALSCRRRILLG 379
Query: 306 SFGEQIPVSLCKNSCDACKHPNLL 329
FGE + C N CD C +P L
Sbjct: 380 YFGESLAED-CGN-CDICLNPPRL 401
>gi|170039315|ref|XP_001847485.1| ATP-dependent DNA helicase recQ [Culex quinquefasciatus]
gi|167862886|gb|EDS26269.1| ATP-dependent DNA helicase recQ [Culex quinquefasciatus]
Length = 859
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/370 (34%), Positives = 207/370 (55%), Gaps = 25/370 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S + +R LY+TPE T F +K + + V +DEAHC+S WGHD
Sbjct: 336 RDRVLNDLKSIRTDIRFLYITPEQANTATFKELMKLLVKHKKVAYVVVDEAHCVSEWGHD 395
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL LR P +P +ALTATA+ +V D+ ++L L+ P+ K+ R NLFY+
Sbjct: 396 FRPDYLKLGYLRTEYPSIPWIALTATASKQVVSDIFKNLRLKEPVAKFKTPCFRKNLFYD 455
Query: 123 VRYKDLLDDAYADLCSVL-----------KANGDTCAIVYCLERTTCDELSAYLSAGGIS 171
V +K+ + D Y L + K + C I+YC R T + ++ LS G+
Sbjct: 456 VVFKNSIQDDYIHLRDYIESILEKEDVDVKPSKKACGIIYCRTRETTERVANSLSKLGLK 515
Query: 172 CAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ 231
AAYHAGL R +V +DW+ + V+ AT++FGMG+D+ VR V H++IP+++ ++YQ
Sbjct: 516 AAAYHAGLKQSERVAVQEDWMDGKYPVISATISFGMGVDKGSVRFVIHWDIPQNVASYYQ 575
Query: 232 ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN--QSKNSQSFSTRERSSKKSISDFSQM 289
ESGRAGRD S +Y+ + + ++F+L ++ +SK+ + +K ++ +F ++
Sbjct: 576 ESGRAGRDGKKSYCRIYHCREQCKSIDFLLRQDLGKSKDKDGKEDKHDKAKLAVKNFEKI 635
Query: 290 VDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL---------GELTSAV 340
VD+CE + CR K + FG+ P C CD C P + K + G+L + +
Sbjct: 636 VDFCESAYCRHKLFSDFFGDDPPD--CNGMCDVCTDPKKVEKAIETFQQLSVSGKLKTKI 693
Query: 341 LQKNHFSQIF 350
++F+ ++
Sbjct: 694 GYDDNFADLY 703
>gi|329120630|ref|ZP_08249293.1| ATP-dependent helicase RecQ [Neisseria bacilliformis ATCC BAA-1200]
gi|327460854|gb|EGF07188.1| ATP-dependent helicase RecQ [Neisseria bacilliformis ATCC BAA-1200]
Length = 782
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/321 (41%), Positives = 183/321 (57%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+I ED+ G+ L+LLYV+PE T F+ L ++L AIDEAHC+S WGHDFR
Sbjct: 99 QIAEDIAQGR--LKLLYVSPERLVTERFLRFLDHTP----VSLFAIDEAHCVSQWGHDFR 152
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR+L L + P VP +ALTATA + + D+ L L+N + F+RPN++Y+V
Sbjct: 153 PEYRQLGLLADRYPAVPRIALTATADAETRADIKHYLHLENAAEFVAGFDRPNIYYQVVE 212
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ L +K IVYCL R D+ +A+L+ GI+ AAYHAG+ R
Sbjct: 213 KN---GGKKQLLQFVKQQNGESGIVYCLSRKKVDDTAAFLNENGIAAAAYHAGMGMAERE 269
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ + V+VATVAFGMGID+ DVR V H ++P+S+E FYQESGRAGRD LP++S
Sbjct: 270 AAQHRFTHEDGLVIVATVAFGMGIDKPDVRFVAHLDMPQSIEHFYQESGRAGRDGLPAES 329
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L YG++D + L + + Q+ S+ E + + M CE + CRR +L
Sbjct: 330 WLCYGLND-----YALLR---ERIQTGSSGEFQKQIELQKLDAMFAVCETAECRRAALLR 381
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE IP CD C HP
Sbjct: 382 HFGETIPPC---GHCDNCLHP 399
>gi|325187369|emb|CCA21907.1| bloom syndrome protein putative [Albugo laibachii Nc14]
Length = 590
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 199/347 (57%), Gaps = 32/347 (9%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPG--FMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ +K IY +L +PS++LLYVT E + FMS L +H + +L IDEAHCIS
Sbjct: 247 IALKKTIYAELKRPRPSIKLLYVTAERIGSVAADFMSLLHDLHQKKMLARFVIDEAHCIS 306
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y KL L+ P +PILALTATAA V + V++SL + + LVL++ FNR N
Sbjct: 307 QWGHDFRPDYSKLGVLKTAFPSIPILALTATAAENVVRHVLKSLHINDALVLRTGFNRSN 366
Query: 119 LFYEVRYKDLLD-DAYADLCSVLK---------------ANGDTCAIVYCLERTTCDELS 162
L +EV K D +A L ++L ++ IVYC+ R C++++
Sbjct: 367 LLFEVHEKPSGDIEARKHLLALLTCRFGYRKATWTEDSFSSEGPSGIVYCMTRDECEDVA 426
Query: 163 AYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNI 222
+L GIS YH G + R V W ++V AT+A+GMGI++ DVR V H+++
Sbjct: 427 NFLFDHGISADFYHGGQSKTDRQLVQQAWQRGHVRIVCATIAYGMGINKADVRFVIHYSL 486
Query: 223 PKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILS---KNQSKNSQSFSTRERSS 279
KS+E +YQE+GRAGRD PS ++ + +D R+ ILS KN ++ +++
Sbjct: 487 AKSIEGYYQEAGRAGRDSQPSHCIVLFNDNDGYRLRRILSIPQKNMTRQTRAL------- 539
Query: 280 KKSISDFSQMVDYCE-GSGCRRKKILESF-GEQIPVSLCKNSCDACK 324
+ + ++V YC+ + CRR+ ++E F GE+ P CK +CD C+
Sbjct: 540 --HLKNLKEVVLYCQDKTRCRRQYLVEYFGGEKFPREQCKRTCDNCQ 584
>gi|326336566|ref|ZP_08202735.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691231|gb|EGD33201.1| ATP-dependent helicase RecQ [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 730
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 188/306 (61%), Gaps = 21/306 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ED+ +G+ +LLYV PE + LK I+ ++ VA+DEAHCIS WGHDFRP
Sbjct: 106 VMEDIRNGET--KLLYVAPESLTKDEYADFLKTIN----ISFVAVDEAHCISEWGHDFRP 159
Query: 67 SYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
YR + ++ + L + +PI+ALTATA KVQ+D++++L + LV KSSFNRPNL+YEVR
Sbjct: 160 EYRNIKAIIDRLGNNIPIIALTATATTKVQEDILKNLGIPEALVFKSSFNRPNLYYEVRP 219
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K + I+YCL R + +EL+ L GI+ YHAGL+ K R+
Sbjct: 220 K--TKNINSDIIRFVKQHPGQSGIIYCLSRKSVEELAQTLQVNGITAIPYHAGLDAKTRA 277
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ +VVVAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD
Sbjct: 278 KHQDMFLMEEVEVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGRDGGEGYC 337
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E F++ K E+ +++ MV Y E S RRK IL
Sbjct: 338 LAFYCYKDIEKLEKFMVGK---------PIAEQEVGQAL--LQDMVAYAETSTSRRKFIL 386
Query: 305 ESFGEQ 310
FGE+
Sbjct: 387 HYFGEE 392
>gi|118590546|ref|ZP_01547948.1| probable atp-dependent dna helicase protein [Stappia aggregata IAM
12614]
gi|118437009|gb|EAV43648.1| probable atp-dependent dna helicase protein [Stappia aggregata IAM
12614]
Length = 629
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 188/326 (57%), Gaps = 28/326 (8%)
Query: 9 EDLDSGKPSLR-----LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
E+ DS + +LR LLYVTPE T F L + + L AIDEAHC+S WGHD
Sbjct: 118 EEQDSIRSALRRGEIDLLYVTPERLGTENFRKFLDTLQ----IALFAIDEAHCVSQWGHD 173
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y LS LR+ P VP +ALTATA P QKD++ L +++ V +SF+RPN+ YE+
Sbjct: 174 FRPEYMSLSCLRDRYPGVPRVALTATADPHTQKDILARLQMEDASVFSTSFDRPNIRYEI 233
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ + L LK + IVYCL R ++++ +L++ GI YHAGL +
Sbjct: 234 VERT---NQRQQLLDFLKKHSGESGIVYCLSRAKVEDIAEWLTSKGIRALPYHAGLPAEQ 290
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RS+ D ++ +VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD PS
Sbjct: 291 RSANQDAFLLEEGLCLVATVAFGMGIDKPDVRYVAHLDLPSSVEAYYQETGRAGRDGAPS 350
Query: 244 KSLLYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
++ + YGM D RRRM +++ + E + + + ++ CE +GCRR
Sbjct: 351 EAFMAYGMADLVQRRRM---IAEGDAP--------EEVKRAENAKLNALLGICETAGCRR 399
Query: 301 KKILESFGEQIPVSLCKNSCDACKHP 326
+ +L FGE P C N CD C P
Sbjct: 400 QALLAHFGETYP-KPCGN-CDTCLSP 423
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 182/308 (59%), Gaps = 23/308 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE ++ L+ I ++ VA+DEAHCIS WGHDFR
Sbjct: 104 QVMQDIKSG--ITKLLYVAPESLTKEDYIEFLRTIQ----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L D+PI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNIRAIIKRLGDDIPIIGLTATATPKVQEDILKNLGMTDAKTFKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R +EL+ L GIS YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFIKQNPGKSGIIYCLSRKRVEELAQVLQVNGISAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L +Y D ++E F + + +++ I ++V Y E S RRK
Sbjct: 336 CLAFYSYKDVEKLE------------KFMSGKPVAEQEIGHALLQEIVAYAETSMSRRKF 383
Query: 303 ILESFGEQ 310
IL FGE+
Sbjct: 384 ILHYFGEE 391
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/329 (40%), Positives = 189/329 (57%), Gaps = 21/329 (6%)
Query: 4 KTKIYEDLDSGKPS--LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
KT I E L P ++LLYVTPE L+ +S +++HSR L + IDEAHC+S W
Sbjct: 857 KTHIMEGLRERDPQKFMQLLYVTPEMLSKNQRMISAFQQLHSRRRLARIVIDEAHCVSQW 916
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L + P VP++ALTATA V+ DV+ +L +Q SFNRPNL
Sbjct: 917 GHDFRPDYKALGDVVRQFPGVPVIALTATATQLVRTDVVANLGIQGCRQFSQSFNRPNLS 976
Query: 121 YEV--RYKDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
YEV + K++++D + ++K D I+YCL R +C++++ LS GIS YHA
Sbjct: 977 YEVLPKSKNIIND----IAKLIKEKHDKKSGIIYCLSRKSCEQVAEKLSNLGISAFHYHA 1032
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
G+ RS+V W + V+VAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAG
Sbjct: 1033 GMEPAERSAVQRKWQHNEYHVIVATIAFGMGIDKADVRYVVHHTLPKSLEGYYQETGRAG 1092
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGS 296
RD S LYY D R + ++ + Q K+ + D ++ +CE
Sbjct: 1093 RDGKRSDCYLYYQYGDCRSLRKMIDDGEGSWEQ---------KQRLHDMLRSVIQFCENK 1143
Query: 297 G-CRRKKILESFGEQIPVSLCKNSCDACK 324
CRR ++L F E S CK++CD C+
Sbjct: 1144 ADCRRAQVLGYFSESFDPSKCKSTCDNCR 1172
>gi|126662148|ref|ZP_01733147.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
gi|126625527|gb|EAZ96216.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
Length = 731
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 127/305 (41%), Positives = 181/305 (59%), Gaps = 20/305 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ +D+ SG +LLYV PE ++ L + ++ VAIDEAHCIS WGHDFRP
Sbjct: 105 VKKDITSG--ITKLLYVAPESLTKEEYIEFLNSVP----ISFVAIDEAHCISEWGHDFRP 158
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L ++ L DVP++ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR K
Sbjct: 159 EYRNLRNIVRLLGDVPMIGLTATATPKVQEDILKNLDMPDANTFKASFNRPNLYYEVRTK 218
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
+ +D+ +K + ++YCL R +E++ L GIS YHAGL+ K R+
Sbjct: 219 --TKNIESDIIRFIKQHKGKSGVIYCLSRKKVEEIAQVLQVNGISAVPYHAGLDAKTRAK 276
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ +VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD L
Sbjct: 277 HQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCL 336
Query: 247 LYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 337 AYYSYKDIEKLEKFLSGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFLLH 385
Query: 306 SFGEQ 310
FGE+
Sbjct: 386 YFGEE 390
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+++ +++ LD+ P L+LLYVTPE+ + F++K+ ++ R L + IDEAHC+S
Sbjct: 986 EMRRMVFQKLDAEHPEHELQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVS 1045
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + R P VP++ALTATA V DV +L +++ SFNRPN
Sbjct: 1046 QWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPN 1105
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGG-ISCAAYH 176
L+YEVR K+ + A + ++K D I+Y L R + + ++ L I YH
Sbjct: 1106 LYYEVRMKE--QNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1163
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + SV +W + R +VVVAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRA
Sbjct: 1164 ASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1223
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD PS LY+ D + + +++ + +Q ++ + +++V YCE
Sbjct: 1224 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQ--------KERQLQMLNRVVSYCESQ 1275
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR+++L FGE+ C++ CD C++
Sbjct: 1276 HTCRREEVLRYFGEEFDYRKCRDGCDNCRN 1305
>gi|319902947|ref|YP_004162675.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
gi|319417978|gb|ADV45089.1| ATP-dependent DNA helicase, RecQ-like protein [Bacteroides
helcogenes P 36-108]
Length = 603
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D+++ L L P + SSF+RPNL V+ + +
Sbjct: 158 QFPQIPIIALTATADKITREDIIKQLHLNQPKIFISSFDRPNLSLTVKRGYQQKEKGKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + C I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFINRHPGECGIIYCMSRSKTESVAQMLQKQGIKAAIYHAGLSAAKRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T +I +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATESGQQSINIEKLQRMQQYAEADICRRRILLSYFGENTAHD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|393763185|ref|ZP_10351808.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
gi|392606102|gb|EIW88990.1| ATP-dependent DNA helicase RecQ [Alishewanella agri BL06]
Length = 606
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 183/311 (58%), Gaps = 22/311 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLYV PE P F+ +L+++ ++L AIDEAHC+S WGHDFRP Y L+ LR +
Sbjct: 108 LKLLYVAPERLLQPQFIERLQEVG----VSLFAIDEAHCVSQWGHDFRPDYMALAQLRQH 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA P Q+D+++ L LQ P + + SF+RPN+ Y V+ K L
Sbjct: 164 FPGVPVMALTATADPATQQDIVQQLALQQPFIHRGSFDRPNIRYTVQEKF---RPLEQLL 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ LK + I+YC R DEL+A L G AAYHAG + R V D +
Sbjct: 221 AYLKQQENHSGIIYCSSRRKVDELTAQLQEKGFKAAAYHAGHDATHRQQVQDAFKRDDLA 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMG+D+ ++R V HF +P+++EA+YQE+GRAGRD + +++LL + D RM
Sbjct: 281 LIVATVAFGMGVDKPNIRFVVHFELPRTIEAYYQETGRAGRDGVAAEALLLFDPADIGRM 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE--QIPVSL 315
+ L + + N ++ T +R F M + E CRR +L FGE Q P
Sbjct: 341 KRWL-QTEENNLRAEVTWQR--------FLSMAAFAEAQTCRRLVLLNYFGEARQQP--- 388
Query: 316 CKNSCDACKHP 326
C N CD C +P
Sbjct: 389 CGN-CDICLNP 398
>gi|347829887|emb|CCD45584.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1775
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 184/330 (55%), Gaps = 17/330 (5%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ + +++ L+ KP + LLYVTPE+ + SKL ++++ L + IDEAHC+S
Sbjct: 990 ETRQQLFNGLNERKPEQFVELLYVTPEMINKSNAIQSKLDDLYAKKRLARIVIDEAHCVS 1049
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L LR P VP +ALTATA +V+KDV+ +L +QN LK SFNRPN
Sbjct: 1050 QWGHDFRPDYKNLHELRGRYPGVPFIALTATATERVKKDVIHNLGMQNCEQLKQSFNRPN 1109
Query: 119 LFYEVRYKDLLDDAYADLCSVLKA----NGDTCAIVYCLERTTCDELSAYLSAGGISCAA 174
++YEVR K A + K + I+YCL R C+E++ L GI
Sbjct: 1110 IYYEVRRKTGKGSTAAMFSEITKMLSVDYKNQSGIIYCLSRDNCEEVAKKLREQGIRAHH 1169
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
+HA + + + W QVVVAT+AFGMGID+++VR V H+ +PK++E +YQE+G
Sbjct: 1170 FHAHMTPEEKKDTQHRWQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETG 1229
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE 294
RAGRD P+ LYYG D + + ++ K + T +R MV +C+
Sbjct: 1230 RAGRDGKPAACFLYYGFQDSQIYKKMIEKGEG--GPDVKTEQRQM------LEAMVRFCD 1281
Query: 295 GS-GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR ++L FGE C N CD C
Sbjct: 1282 NRIDCRRVQLLRYFGETFRREDCGN-CDTC 1310
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 129/327 (39%), Positives = 189/327 (57%), Gaps = 14/327 (4%)
Query: 4 KTKIYEDLDS--GKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
K +I E L + ++ LYVTPE L+ +S ++++ R L + IDEAHC+S W
Sbjct: 116 KNQIREALGQRDAQEFIQCLYVTPEMLSKNESMLSIFERLYQRRQLARIVIDEAHCVSQW 175
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L ++R P+VP++ALTATA V+ DV+ +L + + + SFNRPNL+
Sbjct: 176 GHDFRPDYKLLGNVRQRFPEVPVMALTATATDAVKLDVIHNLHIDSCEIFTRSFNRPNLY 235
Query: 121 YEVRYKDLLDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAG 178
YEVR K+ + +++K + I+YCL R C++++A L + A YHAG
Sbjct: 236 YEVRPKESKGKDLESIATLIKERHRGQSGIIYCLSRKNCEDMAADLVKQHKVKAAHYHAG 295
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L + RS W S V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGR
Sbjct: 296 LTSEQRSKAQKQWQSGTYHVIVATIAFGMGIDKADVRFVIHNSIPKSLEGYYQETGRAGR 355
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SG 297
D S L+YG D ++ ++ + + Q ++R + +MV +CE S
Sbjct: 356 DGKHSGCYLFYGYSDAGKLRRMIDDGEGSHEQ----KDRQHQM----LRKMVQFCENRSD 407
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACK 324
CRR ++L F E C+N CD CK
Sbjct: 408 CRRVQVLAYFSEVFHQDECQNQCDNCK 434
>gi|359406153|ref|ZP_09198865.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
gi|357556705|gb|EHJ38287.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
Length = 723
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 182/323 (56%), Gaps = 19/323 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++Y+D+ G+ +LLYV PE + + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVYKDVHEGRT--KLLYVAPESLNKEDNLEFFRSFK----ISFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + P++ALTATA KV+ D+ +SL + + KSSFNR NL+YEVR
Sbjct: 157 PEYRNIRPTINKIGAAPVIALTATATDKVRMDIKKSLGITDAKEFKSSFNRANLYYEVRQ 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D + +K + I+YC+ R +EL+A L A I AAYHAGL+ RS
Sbjct: 217 K--TNDIDKQIIKFIKQHPGKSGIIYCISRKKVEELAAVLKANDIKAAAYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGIC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAYKDLQKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAETSVCRRKVLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHPNL 328
FGE+ C N CD C HP +
Sbjct: 385 YFGEEYTKENCGN-CDNCLHPKV 406
>gi|110597180|ref|ZP_01385469.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
gi|110341371|gb|EAT59836.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
Length = 597
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/307 (39%), Positives = 184/307 (59%), Gaps = 17/307 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
SL LLYV PE F L +++ +++ IDEAHC+S WGHDFRP Y LS+L +
Sbjct: 99 SLDLLYVAPERFTFDHFRELLGRVN----ISMAVIDEAHCVSEWGHDFRPDYLSLSALVS 154
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P+ A TATA +VQ+D+++ + L+NPL++++SF+RPNLFY+VR+K+ D A +
Sbjct: 155 LFPDLPVSAFTATATHRVQQDILDRIALRNPLIVRASFDRPNLFYDVRFKEKPD---AQI 211
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++LKAN I+Y R + ++ +A L A G YHAGL+D R + +I
Sbjct: 212 VAILKANKGKAGIIYRTSRKSVNDTAAMLQARGFRALPYHAGLSDDERKRNQEAFIRDEV 271
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+V+VAT+AFGMGID+ ++R V H ++PKS+E +YQE+GRAGRD P+ L + D +
Sbjct: 272 EVIVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAHCTLLFAQGDIPK 331
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ F + + ++ +++ +++ + S CRR +L FGE P C
Sbjct: 332 VRFFIDSMLDETERA---------RALDALTRVTSFASTSVCRRITLLNYFGETYPHENC 382
Query: 317 KNSCDAC 323
SCD C
Sbjct: 383 -GSCDIC 388
>gi|453080394|gb|EMF08445.1| ATP-dependent DNA helicase recQ [Mycosphaerella populorum SO2202]
Length = 485
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 191/355 (53%), Gaps = 27/355 (7%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K I DL SG P +RLLYVTPE F + LK ++ + L +A+DEAHCIS WGH
Sbjct: 105 TKQAIMADLKSGHPLIRLLYVTPEYCQLDHFRNSLKTVYQQRELARIAVDEAHCISEWGH 164
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV--LKSSFNRPNLF 120
DFRPS+++LS + PDVP++ TATA V++DV+ +L L + + +RPNL
Sbjct: 165 DFRPSFKELSWFKQEFPDVPMICCTATAPQAVREDVIRTLGLDQSRLQSFAMTTSRPNLH 224
Query: 121 YEVRYKDLLDDAYADLCSVLKANGD---------------------TCAIVYCLERTTCD 159
+EVR+ + +D Y + + +++ + I+Y R +
Sbjct: 225 FEVRFTNEEEDRYDNFLAWIRSAHERRTNNVARSQELSQRNERPTNVSGIIYTWYRKDTE 284
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
+L+A L GI AYHAGL + + LD W+ ++ V+VAT AFGMGID+++VR V
Sbjct: 285 QLAARLQHDGIGAKAYHAGLTIEQKEDHLDGWVKNKDGYDVIVATTAFGMGIDKENVRFV 344
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRER 277
H+ IPKS E FYQESGRAGRD S +LYY +DR R+ F + + K +
Sbjct: 345 VHWQIPKSFEGFYQESGRAGRDGKASICMLYYSREDRERLSFTMQREMEKQRGKGEMALK 404
Query: 278 SSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
+ +V YCE + CR K I + FGE+ C+ +CD K LAK
Sbjct: 405 AQANRSKSVQALVKYCESVTVCRHKLIADYFGEKEDPP-CQWACDWHKDKIALAK 458
>gi|189238078|ref|XP_971743.2| PREDICTED: similar to DNA helicase recq5 [Tribolium castaneum]
Length = 1707
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 203/359 (56%), Gaps = 16/359 (4%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
DL S +P RLLY+TPE AT F S + + V +DEAHC+S WGHDFRP Y
Sbjct: 1005 DLKSTQPLTRLLYITPEQAATKTFKSLYDNLVKFDKVAFVVVDEAHCVSQWGHDFRPDYL 1064
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
KL LR +P +ALTATA +V KD++ SL L + + K+S R NL+Y+V +++L+
Sbjct: 1065 KLGELR--AKKIPFVALTATAGAEVTKDIITSLKLADLKLFKTSCFRANLYYDVLFQNLI 1122
Query: 130 DDAYADLCSVLKA---NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
++ + L + + C IVYC R + ++ L++ G+ AYHAGL + R
Sbjct: 1123 ENEFLHLKKFIVGCLEDSQDCGIVYCRTREQTEAVTFKLNSLGLKARAYHAGLKNTERLQ 1182
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
++W QV+ AT++FGMG+D+ VR V H+ +PK +FYQESGRAGRD P+K
Sbjct: 1183 CQEEWQRGDSQVICATISFGMGVDKATVRFVVHWGVPKDPASFYQESGRAGRDGKPAKCR 1242
Query: 247 LYYGMDDRRRMEFILSKN--QSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
+YY D R + F L+ + ++K+ QS R+ ++ ++ F +MV++CE S CR K
Sbjct: 1243 IYYNRGDSRAILFHLNHDLGKAKDKQS---RKIKAENALKSFKKMVEFCENSDYCRHKLF 1299
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTD--GG 360
+ FGE P C N CD C + K + E ++ N + + S+D +D GG
Sbjct: 1300 SDHFGE--PPPKCINKCDYCTDKKAVKKMVEEFHVRNIEYNTVG-LSVQSEDYSDLYGG 1355
>gi|270009277|gb|EFA05725.1| homolog of RecQ [Tribolium castaneum]
Length = 1715
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 203/359 (56%), Gaps = 16/359 (4%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
DL S +P RLLY+TPE AT F S + + V +DEAHC+S WGHDFRP Y
Sbjct: 1013 DLKSTQPLTRLLYITPEQAATKTFKSLYDNLVKFDKVAFVVVDEAHCVSQWGHDFRPDYL 1072
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
KL LR +P +ALTATA +V KD++ SL L + + K+S R NL+Y+V +++L+
Sbjct: 1073 KLGELR--AKKIPFVALTATAGAEVTKDIITSLKLADLKLFKTSCFRANLYYDVLFQNLI 1130
Query: 130 DDAYADLCSVLKA---NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
++ + L + + C IVYC R + ++ L++ G+ AYHAGL + R
Sbjct: 1131 ENEFLHLKKFIVGCLEDSQDCGIVYCRTREQTEAVTFKLNSLGLKARAYHAGLKNTERLQ 1190
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
++W QV+ AT++FGMG+D+ VR V H+ +PK +FYQESGRAGRD P+K
Sbjct: 1191 CQEEWQRGDSQVICATISFGMGVDKATVRFVVHWGVPKDPASFYQESGRAGRDGKPAKCR 1250
Query: 247 LYYGMDDRRRMEFILSKN--QSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKI 303
+YY D R + F L+ + ++K+ QS R+ ++ ++ F +MV++CE S CR K
Sbjct: 1251 IYYNRGDSRAILFHLNHDLGKAKDKQS---RKIKAENALKSFKKMVEFCENSDYCRHKLF 1307
Query: 304 LESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTD--GG 360
+ FGE P C N CD C + K + E ++ N + + S+D +D GG
Sbjct: 1308 SDHFGE--PPPKCINKCDYCTDKKAVKKMVEEFHVRNIEYNTVG-LSVQSEDYSDLYGG 1363
>gi|389638224|ref|XP_003716745.1| ATP-dependent DNA helicase recQ [Magnaporthe oryzae 70-15]
gi|351642564|gb|EHA50426.1| ATP-dependent DNA helicase recQ [Magnaporthe oryzae 70-15]
Length = 489
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 200/358 (55%), Gaps = 35/358 (9%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K IY DL SG P RLLYVTPEL + F +L+ +H + L + +DEAHCIS WGHD
Sbjct: 104 KEHIYLDLASGHPRTRLLYVTPELCSGDFFRKRLQLVHEQKELARIVVDEAHCISEWGHD 163
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-----QNPLVLK---SSFN 115
FR Y++LS R PDVP++ LTATA +V++DV+ +L L +P LK ++ +
Sbjct: 164 FRKDYKRLSWFREAFPDVPVMCLTATANERVRRDVLATLGLVKTGNPSPARLKQFTTTAH 223
Query: 116 RPNLFYEVRY-KDLLDDAYADLCSVLK-----------------ANGDTCA---IVYCLE 154
RPNL EVR+ D +D Y+D L+ +N A I+Y +
Sbjct: 224 RPNLHLEVRFTSDEANDRYSDFVQWLQDVYERRREDERRTELEGSNERVEAVSGIIYTIS 283
Query: 155 RTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRK 212
R+ C+ L+A L GI +HA L+ + + S L WI++ V+VAT AFGMGID+
Sbjct: 284 RSECESLAASLREDGIGARPFHAKLSKQTKESTLAKWITNDPGYDVIVATTAFGMGIDKD 343
Query: 213 DVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSF 272
+VR V H+ +PKS E +YQE+GRAGRD S LYY +DR R +++++ +N
Sbjct: 344 NVRFVVHWRLPKSFEGYYQEAGRAGRDGRASYCFLYYSREDRDRTYSMVTRDAHQNRSGD 403
Query: 273 STRERSSKKSISDFSQMVDYCE-GSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
S ++ + +++V YCE SGCR + FGE I S C +CD + P LL
Sbjct: 404 SGGNGGAR--LESLNRLVAYCEDTSGCRHATLCRYFGETIEPS-CDFACDWHRDPQLL 458
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+++ +++ LD+ P L+LLYVTPE+ + F++K+ ++ R L + IDEAHC+S
Sbjct: 986 EMRRMVFQKLDAEHPEHELQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVS 1045
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + R P VP++ALTATA V DV +L +++ SFNRPN
Sbjct: 1046 QWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPN 1105
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGG-ISCAAYH 176
L+YEVR K+ + A + ++K D I+Y L R + + ++ L I YH
Sbjct: 1106 LYYEVRMKE--QNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1163
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + SV +W + R +VVVAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRA
Sbjct: 1164 ASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1223
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD PS LY+ D + + +++ + +Q ++ + +++V YCE
Sbjct: 1224 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQ--------KERQLQMLNRVVSYCESQ 1275
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR+++L FGE+ C++ CD C++
Sbjct: 1276 HTCRREEVLRYFGEEFDYRKCRDGCDNCRN 1305
>gi|423316589|ref|ZP_17294494.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
gi|405583639|gb|EKB57579.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum ATCC 43767]
Length = 733
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++++D++ GK +LLYV PE + LK + ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVFDDIEKGKT--KLLYVAPESLIKDEYSDFLKSVK----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ + DVPI+ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNLKNIIEKIADVPIIALTATATPKVQDDIQKTLGMSDAKVYKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D ++ + I+YCL R +E + L GI+ YHAGL+ K R
Sbjct: 218 KINVD---KEIVKFINQRKGKSGIIYCLSRKKVEEFAQLLQVNGINALPYHAGLDQKTRV 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 275 ANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L +Y D ++E L++ + S +E + +++ Y E S RR+ IL
Sbjct: 335 LAFYDPKDIEKLEKFLAQ------KPLSEKEI----GLQLLHEVIGYAETSMSRRQYILY 384
Query: 306 SFGEQI 311
FGE+
Sbjct: 385 YFGEEF 390
>gi|444313787|ref|XP_004177551.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
gi|387510590|emb|CCH58032.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
Length = 1416
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 188/310 (60%), Gaps = 12/310 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ +A+ LKK++ G L V IDEAHC+S+WGHDFRP Y++L +
Sbjct: 828 LDLIYMSPEMISASEQCKRALKKLYDDGKLARVVIDEAHCVSNWGHDFRPDYKELKYFKR 887
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PD+P++ALTATA +V+ D++ +L L +P+ LK SFNR NL+YEV K ++ +
Sbjct: 888 EFPDIPMIALTATANEQVRMDIIHNLELNDPVFLKQSFNRNNLYYEVTKK--TKNSIFQM 945
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+K+ + IVYC + +C++ SA L GI A YHAG+ R V W +
Sbjct: 946 SDEIKSRFKNQTGIVYCHSKNSCEQTSALLEKSGIKAAFYHAGMEPDDRLRVQKAWQADE 1005
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ ATVAFGMGID+ DVR V HF +P+++E +YQE+GRAGRD S + Y+ D R
Sbjct: 1006 IQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGKFSHCITYFSFRDIR 1065
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ ++++ + + + +K ++ Q++ YC+ + CRRK +L F E
Sbjct: 1066 SIQTMIERDKNLD-------KSNKEKHLNKLQQVLAYCDNITDCRRKLVLSYFNENFNSK 1118
Query: 315 LCKNSCDACK 324
C +CD C+
Sbjct: 1119 DCHKNCDNCR 1128
>gi|436838278|ref|YP_007323494.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384069691|emb|CCH02901.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 735
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 188/314 (59%), Gaps = 19/314 (6%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
K ++LLYV+PE + F + L + L++ AIDEAHCISSWGHDFRP Y +L++L
Sbjct: 123 KGQIKLLYVSPEKLLSESFYTFLNSLK----LSMFAIDEAHCISSWGHDFRPEYTQLNTL 178
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R + P+VPI+ALTATA ++D+ + L + +P V SFNR NL +V +
Sbjct: 179 RRWFPNVPIIALTATADRLTRQDIADRLAMHDPAVFIDSFNRTNLSLQVLPGT---NRIG 235
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ +L DT I+YCL R +C+ ++A L G S A YHAG++ R+ V + ++
Sbjct: 236 QIAKLLSLKPDTSGIIYCLSRKSCESVAAKLIEKGYSAAYYHAGMDPNERARVQEAFLRD 295
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+++ AT+AFGMGID+ +VR V H+N+PK++E +YQE GRAGRD LPS+++L+Y D
Sbjct: 296 DVRIMCATIAFGMGIDKSNVRWVMHYNMPKNIEGYYQEIGRAGRDGLPSQTVLFYSFADV 355
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+ +L++N N Q ++ +M Y E + CRR+ +L F EQ+
Sbjct: 356 ATYKDMLTENNPANLQV----------QLAKLERMQQYAEANTCRRQILLSYFSEQL-AE 404
Query: 315 LCKNSCDACKHPNL 328
C N CD C++P +
Sbjct: 405 PCGN-CDVCRNPRV 417
>gi|72393397|ref|XP_847499.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma brucei TREU927]
gi|62359597|gb|AAX80030.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei]
gi|70803529|gb|AAZ13433.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1548
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 189/327 (57%), Gaps = 26/327 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ + SG+ L+YVTPE + F+ LK + +RGLLN +DEAHC+S WGHDFR
Sbjct: 547 LFNEWSSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFR 606
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRKL++L+++ P VPI ALTATA VQ+D++++L L N + K SFNR NL Y V
Sbjct: 607 PDYRKLAALKHHFPQVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSV-- 664
Query: 126 KDLLDDAYADLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ + A + + ++K N +C IVYC+ + C+E++A L GI + YHA ++K
Sbjct: 665 QRITSKAGSTVAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADASEKN 724
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
+ W QV+ ATVAFGMGI++ DVR V H +PKS+E +YQESGRAGRD L S
Sbjct: 725 EKQ--EQWTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSS 782
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKK 302
K L + DR+R E ++ SK+SQ+ S+ MV Y CRR +
Sbjct: 783 KCFLLFAAGDRQRHEQMICG--SKDSQT----------SMLSLCHMVGYTLNDVHCRRMQ 830
Query: 303 ILESFGEQIPVSLCKNS------CDAC 323
L FGE + C + CD C
Sbjct: 831 QLSYFGEHVSDHFCLTAPGDVEICDNC 857
>gi|440465162|gb|ELQ34502.1| ATP-dependent DNA helicase recQ [Magnaporthe oryzae Y34]
gi|440479327|gb|ELQ60099.1| ATP-dependent DNA helicase recQ [Magnaporthe oryzae P131]
Length = 440
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 200/358 (55%), Gaps = 35/358 (9%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K IY DL SG P RLLYVTPEL + F +L+ +H + L + +DEAHCIS WGHD
Sbjct: 55 KEHIYLDLASGHPRTRLLYVTPELCSGDFFRKRLQLVHEQKELARIVVDEAHCISEWGHD 114
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-----QNPLVLK---SSFN 115
FR Y++LS R PDVP++ LTATA +V++DV+ +L L +P LK ++ +
Sbjct: 115 FRKDYKRLSWFREAFPDVPVMCLTATANERVRRDVLATLGLVKTGNPSPARLKQFTTTAH 174
Query: 116 RPNLFYEVRY-KDLLDDAYADLCSVLK-----------------ANGDTCA---IVYCLE 154
RPNL EVR+ D +D Y+D L+ +N A I+Y +
Sbjct: 175 RPNLHLEVRFTSDEANDRYSDFVQWLQDVYERRREDERRTELEGSNERVEAVSGIIYTIS 234
Query: 155 RTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRK 212
R+ C+ L+A L GI +HA L+ + + S L WI++ V+VAT AFGMGID+
Sbjct: 235 RSECESLAASLREDGIGARPFHAKLSKQTKESTLAKWITNDPGYDVIVATTAFGMGIDKD 294
Query: 213 DVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSF 272
+VR V H+ +PKS E +YQE+GRAGRD S LYY +DR R +++++ +N
Sbjct: 295 NVRFVVHWRLPKSFEGYYQEAGRAGRDGRASYCFLYYSREDRDRTYSMVTRDAHQNRSGD 354
Query: 273 STRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
S ++ + +++V YCE SGCR + FGE I S C +CD + P LL
Sbjct: 355 SGGNGGAR--LESLNRLVAYCEDTSGCRHATLCRYFGETIEPS-CDFACDWHRDPQLL 409
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/321 (41%), Positives = 183/321 (57%), Gaps = 19/321 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ++ + K L+LLYVTPE A + FMS+L+K + GLL VA+DE HC S WGHDFR
Sbjct: 175 VHGEMMNKKSQLKLLYVTPEKVAKSKVFMSRLEKAYQGGLLARVAVDEVHCCSQWGHDFR 234
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+ P++ LTATA V KD + LC+Q PL +SFNRPNLFYEVR
Sbjct: 235 PDYKTLGILKRQFPNSPLIGLTATATSHVLKDAQKILCVQKPLTFTASFNRPNLFYEVRL 294
Query: 126 K-DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K +D AD+ ++ + I+YC + ++++ L GI AYHA + +
Sbjct: 295 KPSSSEDFIADITKLINSRYKGQSGIIYCFSQKDSEQVTMSLQKLGIRAGAYHANMEPRD 354
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
+S V W ++ Q+VVATVAFGMGID+ DVR V H ++ KSME +YQESGRAGRD +
Sbjct: 355 KSKVHTKWTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRA 414
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKK 302
+LYYG D R+ S E ++ + + MV Y + + CRR
Sbjct: 415 DCILYYGFGDIFRIS------------SMVVMENVGQQKLYE---MVKYSQNLNRCRRVL 459
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
I + F E + C CD C
Sbjct: 460 IAQHFDEVWDSAKCNKMCDNC 480
>gi|268535576|ref|XP_002632923.1| C. briggsae CBR-HIM-6 protein [Caenorhabditis briggsae]
Length = 395
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/295 (43%), Positives = 175/295 (59%), Gaps = 24/295 (8%)
Query: 40 IHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN--YLPDVPILALTATAAPKVQKD 97
+H RGLL IDEAHC+S WGHDFRP Y KL +LR + P VPI+ALTATA PK+ D
Sbjct: 115 LHRRGLLARFVIDEAHCVSQWGHDFRPDYTKLHTLREKFHTPPVPIIALTATATPKIVTD 174
Query: 98 VMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLKANGD----TCAIVYCL 153
++L +QN + SSF R NL Y DL+ A L +V++ IVYCL
Sbjct: 175 ARDNLKMQNSKLFISSFVRDNLKY-----DLIPKAAKSLINVVEKMKQLYPGKSGIVYCL 229
Query: 154 ERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKD 213
R C+ + L+ G+S YHAGLND R SV W++++ V+ AT+AFGMGID+ D
Sbjct: 230 SRKECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQKGWLANKFDVICATIAFGMGIDKPD 289
Query: 214 VRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFS 273
VR V H+++PKS+E +YQE+GRAGRD +PS L+ Y D R+ ++ N + +S
Sbjct: 290 VRFVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEGNTTTGVRSM- 348
Query: 274 TRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNS---CDACK 324
+++ Q+V YCE S CRRK ++E FGE C+NS CD C+
Sbjct: 349 --------HLNNVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNSKTPCDVCE 395
>gi|406674061|ref|ZP_11081273.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
gi|405584835|gb|EKB58711.1| ATP-dependent DNA helicase RecQ [Bergeyella zoohelcum CCUG 30536]
Length = 733
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 181/306 (59%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++++D++ GK +LLYV PE + LK + ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVFDDIEKGKT--KLLYVAPESLIKDEYSDFLKSVK----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ + DVPI+ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 158 PEYRNLKNIIEKIADVPIIALTATATPKVQDDIQKTLGMSDAEVYKSSFNRPNLYYEVRP 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D ++ + I+YCL R +E + L GI+ YHAGL+ K R
Sbjct: 218 KINVD---KEIVKFINQRKGKSGIIYCLSRKKVEEFAQLLQVNGINALPYHAGLDQKTRV 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ D ++ V+VAT+AFGMGID+ DVR V H++ PKS+E++YQE+GRAGRD
Sbjct: 275 ANQDKFLMEECDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAGRDGGEGHC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
L +Y D ++E L++ + S +E + +++ Y E S RR+ IL
Sbjct: 335 LAFYDPKDIEKLEKFLAQ------KPLSEKEI----GLQLLHEVIGYAETSMSRRQYILY 384
Query: 306 SFGEQI 311
FGE+
Sbjct: 385 YFGEEF 390
>gi|302755182|ref|XP_002961015.1| hypothetical protein SELMODRAFT_402571 [Selaginella moellendorffii]
gi|300171954|gb|EFJ38554.1| hypothetical protein SELMODRAFT_402571 [Selaginella moellendorffii]
Length = 935
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 193/323 (59%), Gaps = 24/323 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K ED +G+ +LY+TPE + S L SRG+ +L+A+DEAHCIS WGHDFR
Sbjct: 90 KTVED-KAGRGEYDILYMTPEKACGTTWTSLL----SRGV-SLLAVDEAHCISEWGHDFR 143
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++LSS+R+ LP+VP +ALTATA KV++D+++SL L N + SSF+RPN+ Y V
Sbjct: 144 PEYQRLSSIRSKLPEVPFVALTATATHKVREDILKSLMLTNAYIAVSSFDRPNILYGVKP 203
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
R ++ ++ L+ G T IVYC DE++ L G + AYH+ L
Sbjct: 204 LTRSNAFREELATEVVKDLEQGGST--IVYCNTIKDVDEVTNALVKAGAAARAYHSKLGL 261
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ V ++ QVVVATVAFGMGID+ D+R V H+ PKS+E++YQESGR GRD L
Sbjct: 262 KERNDVHRTFLKDELQVVVATVAFGMGIDKPDIRRVIHYGCPKSLESYYQESGRCGRDGL 321
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGSGCRR 300
PS LY+ D R EF S+ T+ER KK+++D F+ YC + CRR
Sbjct: 322 PSACWLYFTRADFTRAEFYTSE--------VRTQER--KKAVADAFAASQGYCTTTTCRR 371
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
K IL+ FGE C N CD C
Sbjct: 372 KFILQYFGELTKNDNCGN-CDNC 393
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/311 (42%), Positives = 183/311 (58%), Gaps = 15/311 (4%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LYVTPE L+ +S +++HS G L + IDEAHC+S WGHDFRP Y+ L +
Sbjct: 619 IQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVR 678
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL-LDDAYAD 135
P VP++ALTATA V+ DV+ +L +Q SFNRPNL YEV K + D+ AD
Sbjct: 679 QFPGVPVIALTATATQLVRTDVVANLGIQGCRQYSQSFNRPNLSYEVLPKGRGVIDSIAD 738
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L K G + I+YCL R TC++++ LS GI YHAG++ RS V W +
Sbjct: 739 LIKE-KYTGKS-GIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSDVQRKWQKNE 796
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S+ LYY D R
Sbjct: 797 YHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYLYADSR 856
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGSG-CRRKKILESFGEQIPV 313
+ ++ + + R K+ ++D +V YCE CRR ++L F E
Sbjct: 857 ILRKMIDEGEG---------SREQKQRLNDMLRTVVQYCENKADCRRAQVLGYFSEAFDA 907
Query: 314 SLCKNSCDACK 324
S C N+CD C+
Sbjct: 908 SKCNNTCDNCR 918
>gi|149371063|ref|ZP_01890658.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149355849|gb|EDM44407.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 697
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 25/310 (8%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+L+YV PE + + L KI +NL+A+DEAHCISSWGHDFRP+Y +LS L+
Sbjct: 112 LKLIYVAPE--SIWSLTNHLSKIE----INLIAVDEAHCISSWGHDFRPAYTQLSRLKQE 165
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY-KDLLDDAYADL 136
P PI+ALTATA Q D+++ L + N SSF+RPN++ +VR ++ ++ Y L
Sbjct: 166 FPGTPIIALTATADRATQDDILDQLKISNAKRFVSSFDRPNIYLDVRPGQNRINHIYKFL 225
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
S G I+YCL R + + ++A L G AAYHAGL+ + RS + +D+I+ R
Sbjct: 226 SS----RGLQSGIIYCLSRKSTESITAKLKTKGYDAAAYHAGLSAEDRSQIQEDFINDRT 281
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
++VAT+AFGMGID+ +VR V H+N+PK++E +YQE GR GRD L +++L++Y D
Sbjct: 282 PIIVATIAFGMGIDKSNVRWVIHYNMPKNIEGYYQEIGRGGRDGLKARALMFYSYADVLM 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ + F+ + + ++ +M + E CRRK +L FGEQ+ + C
Sbjct: 342 L------------RKFAEGTPTQEFQLAKLERMQQFSESLNCRRKALLSYFGEQL-IEDC 388
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 389 GN-CDICKNP 397
>gi|299141494|ref|ZP_07034630.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
gi|298576830|gb|EFI48700.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
Length = 725
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 182/321 (56%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG+ +LLYV PE + L+ + ++ AIDEAHCIS WGHDFR
Sbjct: 103 QVMDDVRSGRT--KLLYVAPESLNKEENVEFLQSVK----VSFYAIDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR + N + PI+ALTATA KV+ ++ +SL + + KSSFNR NL+YEVR
Sbjct: 157 PEYRNIRPTINKIGTAPIIALTATATDKVRSNIKKSLGITDAKEFKSSFNRANLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D + ++ + I+YCL R +EL+ L A I A YHAGL+ RS
Sbjct: 217 K--TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHAGLDSATRS 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD
Sbjct: 275 QTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K + E+ + + + Y E S CRRK +L
Sbjct: 335 IAFYAQKDLKKLE--------KFMEGKPVAEQDIGRQL--LQETAAYAESSVCRRKMLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ P C N CD C HP
Sbjct: 385 YFGEEYPHDNCHN-CDNCLHP 404
>gi|328713283|ref|XP_001944776.2| PREDICTED: ATP-dependent DNA helicase Q5-like [Acyrthosiphon pisum]
Length = 1075
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/410 (36%), Positives = 214/410 (52%), Gaps = 36/410 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + + S LLYVTPE AT F L + + L + +DEAHC+S WGHD
Sbjct: 114 RKRVINDLYATQVSTSLLYVTPEQAATDFFKGLLSYLVRKNKLAYIVVDEAHCVSQWGHD 173
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRP----NL 119
FRP Y KL LR +P +ALTATA+ V KD+M +LCL+ P+ S F P NL
Sbjct: 174 FRPDYLKLGMLRELYLHIPWIALTATASADVVKDIMTALCLKTPV---SKFTTPCFRSNL 230
Query: 120 FYEVRYKDLLDDAYADL--------CSVLKANGDT---------CAIVYCLERTTCDELS 162
FY+V + D + ++Y L C L T C I+YC R +E++
Sbjct: 231 FYDVIFDDSITNSYQHLKDFIDQCLCDDLNCLEGTPNINPLTQPCGIIYCRTRELTEEIA 290
Query: 163 AYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNI 222
LS GIS A YHAGL DK R +V + ++S QV+ ATV+FGMGID+ VR V H+ I
Sbjct: 291 TVLSRKGISIAPYHAGLKDKERLAVQEAFMSGHIQVITATVSFGMGIDKATVRFVIHWGI 350
Query: 223 PKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSK--NQSKNSQSFSTRERSSK 280
P S+ A+YQESGRAGRD ++ +Y+ + ++FIL Q+K +++ +K
Sbjct: 351 PSSIPAYYQESGRAGRDGKLARCRIYHSKQAKNSLDFILKSAITQAKTQD----KQKKAK 406
Query: 281 KSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAV 340
S S F +M+ +CE CR + + FG+ P C + CD C + + L +
Sbjct: 407 GSYSMFLKMIQFCESVQCRHEFFADYFGDTKP--QCIDKCDVCSNKEAVKIDLDVFMYGI 464
Query: 341 LQKNH--FSQIFISSQDMTDGGQYSEFWNRDDEASGSEEDISDCDGNINL 388
+NH S + S D GG+ + ++E E D + N+ L
Sbjct: 465 NNRNHTIVSNEQLVSSDFYGGGRNA--VKEENEEYAREGDREEHKKNLAL 512
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 181/318 (56%), Gaps = 12/318 (3%)
Query: 13 SGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
GK +++ ++VTPE +T + F L + + +V IDEAHCIS WGHDFR SY+KL
Sbjct: 552 EGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKL 611
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR--YKDLL 129
S P +PIL LTATA +V+ D++ SL + +V SFNR NL Y VR K ++
Sbjct: 612 SVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKTKGVI 671
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D+ + K I+YCL + +++ L+ GI YHAG++ K R++V
Sbjct: 672 DEIEEMIKRKYKGQ---SGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQK 728
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+W V+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD P+ +LYY
Sbjct: 729 EWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYY 788
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG 308
D+ E K++ N + + ++ ++++ YCE + CRR +L+ FG
Sbjct: 789 NYRDKYTYERFFEKDKENNGDLSHIQ-----TARNNLNEVISYCENTVDCRRTLVLQYFG 843
Query: 309 EQIPVSLCKNSCDACKHP 326
E LC +CD C +P
Sbjct: 844 EVFNSKLCNRTCDNCYNP 861
>gi|347536603|ref|YP_004844028.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529761|emb|CCB69791.1| ATP-dependent DNA helicase RecQ3 [Flavobacterium branchiophilum
FL-15]
Length = 702
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 191/318 (60%), Gaps = 25/318 (7%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + +G +++L+YV PE ++ L+ + + ++L+AIDEAHCIS+WGHDFRP+Y
Sbjct: 102 EQIHNG--NIKLVYVAPES------LNYLEPLFASIQVSLIAIDEAHCISAWGHDFRPAY 153
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
L L+N + PILALTATA ++D+ + L LQNP V +SF+R NL EVR
Sbjct: 154 CNLGYLKNKFANTPILALTATADKATRQDICDQLNLQNPHVFVASFDRKNLSLEVRPAL- 212
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
D + + D I+YCL R T +ELS L + GIS AYHAGL++ R+ V
Sbjct: 213 --DRVKQIVQFIDKKADEAGIIYCLSRKTTEELSEKLQSKGISAMAYHAGLDNHNRTKVQ 270
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
D +I+ QVV ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD P++++L+
Sbjct: 271 DAFINDTCQVVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGQPAETILF 330
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
D ++ Q F+ ++++ ++ +M + + CRRK +L FG
Sbjct: 331 QSYGDVIQL------------QKFALEAQNAEIQLAKLDRMKQFADAQSCRRKILLSYFG 378
Query: 309 EQIPVSLCKNSCDACKHP 326
E + + C N CD CK+P
Sbjct: 379 ELVSEN-CGN-CDVCKNP 394
>gi|25466284|pir||T51906 related to recQ gene for DNA helicase [imported] - Neurospora
crassa
gi|28881176|emb|CAD70358.1| related to recQ gene for DNA helicase [Neurospora crassa]
Length = 483
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 214/391 (54%), Gaps = 44/391 (11%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
IY DL +G P +RLLYVTPEL + F KLK ++ + L + +DEAHCIS WGHDFR
Sbjct: 106 IYADLATGHPLMRLLYVTPELCSGDHFRRKLKLVYEQHELARIVVDEAHCISEWGHDFRK 165
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLK---SSFNRPNLFYE 122
+++LS R PDVP++ LTATA +V+ DV+ +L L + P LK + +RPNL E
Sbjct: 166 DFKRLSWFRETFPDVPVMCLTATANEQVRHDVLTTLGLDKTPGKLKIFSMTAHRPNLHLE 225
Query: 123 VRYK-DLLDDAYADLCSVLKANGDTCA--------------------IVYCLERTTCDEL 161
VR+ D +D Y D + LK D A I+Y + R + L
Sbjct: 226 VRFTSDEANDRYDDFVTWLKGVYDRRAAVDRKAELDAIGERVENVPGIIYTISRDEVESL 285
Query: 162 SAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVCH 219
+A L GI +HA L ++ + L WI++ V+VAT AFGMGID+++VR V H
Sbjct: 286 AAALRHDGIGARPFHAKLPNQVKEETLAKWIANDPGYDVIVATTAFGMGIDKENVRFVVH 345
Query: 220 FNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM-EFILSKNQSKNSQSFSTRERS 278
+ +PKS E +YQE+GRAGRD S LYY +DR R+ ++ + SKN+ + +
Sbjct: 346 WRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDRDRVCNLVMREPVSKNASADGIINKQ 405
Query: 279 SKKSISDFSQMVDYCEGSG-CRRKKILESFGE-QIPVSLCKNSCDACKHPNLLAKYLGEL 336
+++ S++V YCE +G CR I FGE Q+P C +CD K P L + +
Sbjct: 406 ARQ--MSLSRLVAYCEDTGCCRHAAICRYFGETQVPA--CDYACDWHKDPQGLKRRMA-- 459
Query: 337 TSAVLQKNHFSQIFISSQDMTDGGQYSEFWN 367
+ S+ ++S+Q + G Y E+W+
Sbjct: 460 ------RGLASEEWVSTQ--REEGMYDEYWS 482
>gi|6692125|gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana]
Length = 849
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 198/339 (58%), Gaps = 31/339 (9%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+Y+ L+ G+ L++LYVTPE ++ + FMSKL+K H+ G L+L++IDEAHC S WGHDFR
Sbjct: 218 VYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCHNAGRLSLISIDEAHCCSQWGHDFR 277
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ LS L+ P VP++ALTATA KVQ D++E L + + SS NRPNLFY VR
Sbjct: 278 PDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEMLHIPKCVKFVSSVNRPNLFYSVRE 337
Query: 126 KD----LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K L+ D A+ +N ++ IVYC R C++++ L GIS YHA ++
Sbjct: 338 KSAVGKLVVDEIAEFIRESYSNNES-GIVYCFSRKECEQIAGDLRERGISADYYHADMDA 396
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQ---------- 231
R V W ++ QV+V TVAFGMGI++ DVR V H ++ KSME +YQ
Sbjct: 397 NMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQVPVSCPLKLD 456
Query: 232 -ESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMV 290
ESGRAGRD LPS+ +L++ D R + +LS + ++S F E S +++ D +V
Sbjct: 457 IESGRAGRDGLPSECILFFRSADVPR-QLMLSFSPQQSSMVFY--EYSGLQNLYD---IV 510
Query: 291 DYCEG-SGCRRKKILESFGEQIPVSLCKN-----SCDAC 323
YC+ + CRR FGE P C CD C
Sbjct: 511 RYCQSKTKCRRSAFFRHFGE--PSQDCNGILVYRMCDNC 547
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 181/318 (56%), Gaps = 12/318 (3%)
Query: 13 SGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
GK +++ ++VTPE +T + F L + + +V IDEAHCIS WGHDFR SY+KL
Sbjct: 543 EGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKL 602
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR--YKDLL 129
S P +PIL LTATA +V+ D++ SL + +V SFNR NL Y VR K ++
Sbjct: 603 SVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKTKGVI 662
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D+ + K I+YCL + +++ L+ GI YHAG++ K R++V
Sbjct: 663 DEIEEMIKRKYKGQ---SGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQK 719
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+W V+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD P+ +LYY
Sbjct: 720 EWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYY 779
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG 308
D+ E K++ N + + ++ ++++ YCE + CRR +L+ FG
Sbjct: 780 NYRDKYTYERFFEKDKENNGDLSHIQ-----TARNNLNEVISYCENTVDCRRTLVLQYFG 834
Query: 309 EQIPVSLCKNSCDACKHP 326
E LC +CD C +P
Sbjct: 835 EVFNSKLCNRTCDNCYNP 852
>gi|189499066|ref|YP_001958536.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides BS1]
gi|189494507|gb|ACE03055.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides BS1]
Length = 674
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/302 (40%), Positives = 181/302 (59%), Gaps = 17/302 (5%)
Query: 22 YVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDV 81
YV PE F L +++ +++ +DEAHCIS WGHDFRP Y LS+L P V
Sbjct: 175 YVAPERFRLEHFQKLLGEVN----ISMAVVDEAHCISEWGHDFRPDYLLLSALVQLFPGV 230
Query: 82 PILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLK 141
P+ A TATA KVQ+D++ L L++PL++++SF+R NLFY++R+K+ +A A L S+LK
Sbjct: 231 PVAAFTATATLKVQQDILHKLSLRDPLLVRASFDRSNLFYDIRFKE---NANAQLVSILK 287
Query: 142 ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVA 201
+N I+Y R + +E +A L A G YHAGL+D+ R + +I ++VA
Sbjct: 288 SNPGQAGIIYRTSRKSVNETAALLKAKGFRALPYHAGLSDEERQRNQEAFIRDEADIIVA 347
Query: 202 TVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFIL 261
T+AFGMGID+ ++RLV H ++PKS+E++YQE+GRAGRD P++ L + D ++ F +
Sbjct: 348 TIAFGMGIDKSNIRLVIHADLPKSIESYYQETGRAGRDGEPARCTLLFSQSDIPKIRFFI 407
Query: 262 SKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCD 321
E K++S +++ + S CRRK +L+ F E P CK SCD
Sbjct: 408 DT---------IVDETERGKALSSLQKVISFVSTSVCRRKTLLDYFDETYPHDNCK-SCD 457
Query: 322 AC 323
C
Sbjct: 458 IC 459
>gi|261330758|emb|CBH13743.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1548
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/327 (41%), Positives = 189/327 (57%), Gaps = 26/327 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ + SG+ L+YVTPE + F+ LK + +RGLLN +DEAHC+S WGHDFR
Sbjct: 547 LFNEWSSGRIVCTLVYVTPEYFGRSDHFVQSLKSLENRGLLNRFVVDEAHCVSQWGHDFR 606
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YRKL++L+++ P VPI ALTATA VQ+D++++L L N + K SFNR NL Y V
Sbjct: 607 PDYRKLAALKHHFPQVPISALTATATDTVQRDIIQTLGLHNAVSFKGSFNRHNLKYSV-- 664
Query: 126 KDLLDDAYADLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ + A + + ++K N +C IVYC+ + C+E++A L GI + YHA ++K
Sbjct: 665 QRITSKAGSTVAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADASEKN 724
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
+ W QV+ ATVAFGMGI++ DVR V H +PKS+E +YQESGRAGRD L S
Sbjct: 725 EKQ--EQWTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSS 782
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKK 302
K L + DR+R E ++ SK+SQ+ S+ MV Y CRR +
Sbjct: 783 KCFLLFAAGDRQRHEQMICG--SKDSQT----------SMLSLCHMVGYTLNDVHCRRMQ 830
Query: 303 ILESFGEQIPVSLCKNS------CDAC 323
L FGE + C + CD C
Sbjct: 831 QLSYFGEHVSDHFCLTAPGDVEICDNC 857
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 181/318 (56%), Gaps = 12/318 (3%)
Query: 13 SGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
GK +++ ++VTPE +T + F L + + +V IDEAHCIS WGHDFR SY+KL
Sbjct: 540 EGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKL 599
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR--YKDLL 129
S P +PIL LTATA +V+ D++ SL + +V SFNR NL Y VR K ++
Sbjct: 600 SVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKTKGVI 659
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D+ + K I+YCL + +++ L+ GI YHAG++ K R++V
Sbjct: 660 DEIEEMIKRKYKGQ---SGIIYCLSQKNTMDIAQELNKRGIKSKYYHAGMDTKERTTVQK 716
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+W V+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD P+ +LYY
Sbjct: 717 EWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYY 776
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG 308
D+ E K++ N + + ++ ++++ YCE + CRR +L+ FG
Sbjct: 777 NYRDKYTYERFFEKDKENNGDLSHIQ-----TARNNLNEVISYCENTVDCRRTLVLQYFG 831
Query: 309 EQIPVSLCKNSCDACKHP 326
E LC +CD C +P
Sbjct: 832 EVFNSKLCNRTCDNCYNP 849
>gi|328948910|ref|YP_004366247.1| RecQ familyATP-dependent DNA helicase [Treponema succinifaciens DSM
2489]
gi|328449234|gb|AEB14950.1| ATP-dependent DNA helicase, RecQ family [Treponema succinifaciens
DSM 2489]
Length = 520
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/321 (41%), Positives = 190/321 (59%), Gaps = 26/321 (8%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E + SGK ++LLYV+PE G M +L + S+ ++ +AIDEAHCIS WGHDFRP Y
Sbjct: 106 EKILSGK--IKLLYVSPE-GLNSGRMIRLLQ-ESKSSVDCIAIDEAHCISEWGHDFRPDY 161
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
+++ +RN P LALTATA +VQ D++++L ++NP + +SFNRPN+F +V KD
Sbjct: 162 MEITHIRNQFPKSVFLALTATATKQVQADIIKNLRMENPEIFMASFNRPNIFLQVIKKD- 220
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
+ + ++ + + I+YC R D ++ L I +YHAGLND R+
Sbjct: 221 --KPIEQVLNFIENHPNQSGIIYCFSRKQVDLVAQELHINRIKALSYHAGLNDAQRTKNQ 278
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
D+IS + ++VATVAFGMGI++ DVR V HF++PKS+E +YQE GRAGRD L S++LL
Sbjct: 279 QDFISDKADIMVATVAFGMGINKPDVRFVIHFDMPKSIEQYYQEIGRAGRDGLESEALLL 338
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
Y D ++ + N S KS + M++YCE S CRRK +L FG
Sbjct: 339 YSAGDIHKIRYFFKDN------------FDSAKSENLLQGMINYCENSVCRRKSLLSYFG 386
Query: 309 E------QIPVSLCKNSCDAC 323
E Q VS +N CD C
Sbjct: 387 ESYSDARQDCVS-SENCCDIC 406
>gi|428210292|ref|YP_007094645.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
gi|428012213|gb|AFY90776.1| ATP-dependent DNA helicase RecQ [Chroococcidiopsis thermalis PCC
7203]
Length = 708
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 185/314 (58%), Gaps = 16/314 (5%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLS 72
SGK +LLYV PE F+ L I + + AIDEAHC+S WGHDFRP YR+L
Sbjct: 107 SGKT--KLLYVAPERLLNEKFLPFLDLIREKIGIAAFAIDEAHCVSEWGHDFRPEYRQLK 164
Query: 73 SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDA 132
LR P VP LALTATA +V++D+++ L L P + +SFNRPNL+YEV+ K +
Sbjct: 165 QLRQRYPGVPTLALTATATDRVRQDIIQQLGLSQPSIHIASFNRPNLYYEVQPKQ--KQS 222
Query: 133 YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
Y+ L +++ + + IVYCL R DE++ L I+ YHAGL+D R+ +I
Sbjct: 223 YSQLLQIIRQS-EGSGIVYCLSRRKVDEIAFKLQQDKIAALPYHAGLSDTERAENQTRFI 281
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
+V+VAT+AFGMGI++ DVR V H ++P+++E +YQESGRAGRD ++ L+ G
Sbjct: 282 RDDVRVMVATIAFGMGINKPDVRFVIHHDLPRNIEGYYQESGRAGRDGETARCTLFLGYG 341
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D + +E+++ + Q + ++ Q++D+ EG+ CRR +L FGE+
Sbjct: 342 DIKTIEYLIDQKTDLQGQRIARQQ---------LRQVIDFAEGTDCRRTIVLGYFGERF- 391
Query: 313 VSLCKNSCDACKHP 326
C + CD C P
Sbjct: 392 AGQC-SGCDNCLAP 404
>gi|340621987|ref|YP_004740439.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
gi|339902253|gb|AEK23332.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
Length = 729
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/307 (42%), Positives = 184/307 (59%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ S K +LLYV PE + + LK I ++ VA+DEAHCIS WGHDFR
Sbjct: 104 EVMEDIRSKKT--KLLYVAPESLTKDEYANFLKTID----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ + L + +P++ALTATA PKVQ D++++L + V K+SFNRPNL+YEVR
Sbjct: 158 PEYRNIKTIIDRLGEGIPVVALTATATPKVQDDILKNLGMAEANVFKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K + I+YCL R +ELS L GI+ YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQHSKKSGIIYCLSRKKVEELSQTLQVNGITAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L +Y D ++E F++ K E+ +++ +V Y E S RRK I
Sbjct: 336 CLAFYSYKDVEKLEKFMVGK---------PIAEQEIGQAL--LQDIVAYAETSSSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|291614340|ref|YP_003524497.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
gi|291584452|gb|ADE12110.1| ATP-dependent DNA helicase RecQ [Sideroxydans lithotrophicus ES-1]
Length = 614
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 176/310 (56%), Gaps = 14/310 (4%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLYV PE T GF++ L++++ + L AIDEAHC+S WGHDFRP YR L+ L
Sbjct: 109 LKLLYVAPERLLTEGFLNLLERLNQDNNIALFAIDEAHCVSQWGHDFRPEYRGLTVLHER 168
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA + +V+E L L+ SSF+RPN+ Y V K D+A L
Sbjct: 169 FPSVPRIALTATADAPTRSEVVERLSLEQAEQFVSSFDRPNIRYRVTLK---DNARKQLQ 225
Query: 138 SVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L+ + D IVYCL R +E +A+L G YHAGL+ RS ++
Sbjct: 226 DFLETEHPDDAGIVYCLSRKKVEETAAWLKEQGWDALPYHAGLDAAVRSKNQKKFLREEG 285
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
++VATVAFGMGID+ +VR V H ++PKSME +YQE+GRAGRD LP+ + + YG+ D
Sbjct: 286 VIMVATVAFGMGIDKPNVRFVAHLDLPKSMEGYYQETGRAGRDGLPANAWMAYGLGDVVS 345
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
M +L + E + + ++ +CE + CR + IL FGE+ P C
Sbjct: 346 MRQMLLSGDAP--------EERKRVELQKLDALLGFCESTACRHQTILRYFGEEHPGD-C 396
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 397 -NECDNCLSP 405
>gi|381186153|ref|ZP_09893727.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379651827|gb|EIA10388.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 731
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/307 (42%), Positives = 181/307 (58%), Gaps = 20/307 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ +D+ SG +LLYV PE ++ LK + ++ VAIDEAHCIS WGHDF
Sbjct: 103 TQVKKDITSGLT--KLLYVAPESLTKEENVNFLKTVK----ISFVAIDEAHCISEWGHDF 156
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR L + L D+PI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 157 RPEYRNLKHIIKQLGDLPIIGLTATATPKVQEDILKNLDMCDATTFKASFNRPNLYYEVR 216
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + +D+ +K + I+YCL R + ++ L GIS YHAGL+ K R
Sbjct: 217 TK--TKNVESDIIRFIKQHKGKSGIIYCLSRKKVEAIAHVLQVNGISAVPYHAGLDAKTR 274
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 275 ARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGH 334
Query: 245 SLLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L YY D ++E F+ K ++ F+ ++V Y E S RRK +
Sbjct: 335 CLAYYSYKDVEKLEKFMSGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFL 383
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 384 LHYFGEE 390
>gi|332664724|ref|YP_004447512.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332333538|gb|AEE50639.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 732
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/323 (38%), Positives = 188/323 (58%), Gaps = 16/323 (4%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLY+ PE + + ++ ++ VA+DEAHCIS WGHDFRP YR++ S+ + +
Sbjct: 115 KLLYIAPETLTKDENIEFFRTVN----VSFVAVDEAHCISEWGHDFRPEYRRIRSMLDGI 170
Query: 79 -PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
+VPI+ALTATA PKVQ D++++L L++ SSFNR NL+YEVR K + A +
Sbjct: 171 GQEVPIIALTATATPKVQSDILKNLGLRSEHAFMSSFNRENLYYEVRPKGKPEQAVRQII 230
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
V+K I+Y R +E++ L I A YHAGL+ K R+ D+++
Sbjct: 231 QVIKGMPGQSGIIYVQSRKAAEEIAKVLQVNDIKAAPYHAGLDAKTRTRTQDEFLMEDVD 290
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V HF++PKS+E +YQE+GRAGRD L + + +Y D ++
Sbjct: 291 VIVATIAFGMGIDKPDVRFVIHFDMPKSIENYYQETGRAGRDGLEGRCIAFYAYKDMLKL 350
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E L + + RE S+ +++ Y E + CRR+ +L FGE+ + C
Sbjct: 351 EKFL------RDKPVAEREMGSQL----MQEVMAYAETTACRRQFLLHYFGEEYDQANC- 399
Query: 318 NSCDACKHPNLLAKYLGELTSAV 340
CD C++P + E+ A+
Sbjct: 400 TLCDNCRYPKEKIEVTKEMQDAL 422
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 199/358 (55%), Gaps = 39/358 (10%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
K IY +L P+L+LLY+TPEL + + + + +H R L IDEAHC+S WGH
Sbjct: 248 KKWIYNNLYQDTPTLQLLYITPELMSKSDQLRNVMDSLHRRNKLARFVIDEAHCVSQWGH 307
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y++L SLRN P+VPI+ALTATA VQKDV+ +L K R +L
Sbjct: 308 DFRPDYKQLGSLRNIYPNVPIMALTATANDAVQKDVIHNL--------KRKGKRNHL--- 356
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLND 181
AD+ +K + I+YC+ R C++++ L + G+S YH +
Sbjct: 357 -----------ADINEFIKQHYTESGIIYCISRKDCEQVAEALRTTYGVSTKHYHGKMTS 405
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
RS V +W + + +V+VAT+AFGMGID+ DVR V HF++P S+E +YQE+GRAGRD L
Sbjct: 406 SERSEVQSEWQTGKIRVIVATIAFGMGIDKPDVRYVVHFSMPSSLEGYYQETGRAGRDGL 465
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRR 300
P+ LYY D R F++ +Q + S R+R + + M+ YC+ CRR
Sbjct: 466 PAICRLYYSFSDMRTHNFLI--DQGEGSWQQKQRQR------DNLNTMMRYCDNKADCRR 517
Query: 301 KKILESFGEQIPVSLCKNSCDAC---KHPNLLAKYL---GELTSAVLQKNHFSQIFIS 352
K+IL FGE+ + C+ CD C +H K + + + +LQ+ H +I +S
Sbjct: 518 KQILSYFGERFNPAHCQKMCDNCVANQHSTSFLKNMSTEAQQMARLLQQIHPDRITLS 575
>gi|294672822|ref|YP_003573438.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473845|gb|ADE83234.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 722
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/308 (41%), Positives = 176/308 (57%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + L+ + ++ AIDEAHCIS WGHDFRP YRK+ + N +
Sbjct: 110 KLLYVAPESLTKEENVEFLRSVK----ISFYAIDEAHCISEWGHDFRPEYRKIRPIVNEI 165
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
PI+ALTATA KV+ D+ ++L + + KSSFNRPNL+YEVR K D D+
Sbjct: 166 GKAPIIALTATATDKVRTDIKKNLGIVDAAEFKSSFNRPNLYYEVRPKTANVDK--DIIK 223
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K + I+YCL R +EL+ L GI AAYHAGL+ RS+ D+++ V
Sbjct: 224 FIKQHPGKSGIIYCLSRKKVEELAEILRVNGIKAAAYHAGLDSNTRSNTQDEFLMENIDV 283
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD L +Y D ++++
Sbjct: 284 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGICLAFYSYKDLQKLD 343
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + + Y E S CRRK +L FGE C N
Sbjct: 344 --------KFMEGKPVAEQDIGRQL--LVETAAYAETSVCRRKMLLHYFGETYEKDNCGN 393
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 394 -CDNCLHP 400
>gi|333378586|ref|ZP_08470317.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
gi|332883562|gb|EGK03845.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
Length = 731
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 209/379 (55%), Gaps = 28/379 (7%)
Query: 10 DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR 69
D+ SGK +LLYV PE + L++I ++ AIDEAHCIS WGHDFRP YR
Sbjct: 108 DILSGKT--KLLYVAPESLTKEENIDFLRQIK----ISFYAIDEAHCISEWGHDFRPEYR 161
Query: 70 KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLL 129
++ + N + PI+ALTATA PKVQ D+ ++L + V KSSFNR NL+YEVR K
Sbjct: 162 RIRPIVNEIGKHPIIALTATATPKVQMDIQKNLGMVEADVFKSSFNRENLYYEVRSK--T 219
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D D+ +K+ G I+YCL R +E + L I+ YHAGL+ RS+ D
Sbjct: 220 DKVDKDIIKYIKSQGTKSGIIYCLSRKKVEEFAEILQTNNINALPYHAGLDPSTRSANQD 279
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
++ + V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD + + +Y
Sbjct: 280 AFLMEKVNVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAGRDGGEGRCIAFY 339
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
D +++E K Q E+ K + + Y E + CR+K +L FGE
Sbjct: 340 SFKDLQKLE--------KFMQGKPVAEQEIGKQL--LLETAAYAETALCRKKVLLHYFGE 389
Query: 310 QIPVSLCKNSCDACKHP--NLLAK--YLGELTSAVLQKNHFSQIFISSQDMTDGGQYSE- 364
+ C N CD C +P + AK L + + + K F ++ ++ G + SE
Sbjct: 390 EYKEKNCGN-CDNCVNPKKQVEAKDLLLTAIEAVIALKEKFKTDYVI--NILRGKETSEI 446
Query: 365 --FWNRDDEASGSEEDISD 381
+ ++D + GS +D D
Sbjct: 447 ETYGHQDLDVFGSGDDTDD 465
>gi|170042986|ref|XP_001849186.1| werner syndrome helicase [Culex quinquefasciatus]
gi|167866388|gb|EDS29771.1| werner syndrome helicase [Culex quinquefasciatus]
Length = 1079
Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 133/325 (40%), Positives = 190/325 (58%), Gaps = 23/325 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + ++ GK R++YVTPE L+++ + L L+AIDEAHC+S WGHD
Sbjct: 99 RANLVPEIREGK--FRVVYVTPEYLTGDTGRYLLEQVLDQ--LVLIAIDEAHCLSKWGHD 154
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP+YR L +R P VPILA+TATA P V++D++ SL L+ P VL + F+RPNL + V
Sbjct: 155 FRPAYRNLGVVRRICPRVPILAVTATATPNVRQDIVTSLGLREPQVLCTGFDRPNLQFHV 214
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K L + D+ +L N + I+YCL R DE+ L + + C AYHAGL K
Sbjct: 215 RMKSSLG-FWEDVKGLLSRNTEGSIIIYCLTRKQTDEIVDTLRSCKVQCEAYHAGLTLKQ 273
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R V + ++ R Q++VAT+AFGMGID+ DVRLV H+ K +E++YQE+GRAGRD PS
Sbjct: 274 RKEVHESFVRDRVQIIVATIAFGMGIDKPDVRLVIHYGASKDLESYYQEAGRAGRDGQPS 333
Query: 244 KSLLYYGMDDRRRMEFILSKN---QSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
K ++++ D + EF+ Q KN ++ S + M +Y + CRR
Sbjct: 334 KVVMFWNRADFKTHEFLRENTPGGQQKNLEALSKK-------------MHEYLDTRDCRR 380
Query: 301 KKILESF-GEQI-PVSLCKNSCDAC 323
+ IL F G+ P + KN CD C
Sbjct: 381 QFILNYFEGDSAKPTTSQKNCCDNC 405
>gi|372223763|ref|ZP_09502184.1| RecQ familyATP-dependent DNA helicase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 733
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 133/307 (43%), Positives = 180/307 (58%), Gaps = 21/307 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
K+ D+ +G +LLYV PE LT + + ++ VA+DEAHCIS WGHDF
Sbjct: 104 KVKSDITNG--VTKLLYVAPESLTKEENI-----EFFNGVTISFVAVDEAHCISEWGHDF 156
Query: 65 RPSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YR L + + L D +PI+ LTATA PKVQ+D++++L + + V K+SFNRPNLFYEV
Sbjct: 157 RPEYRNLRKIISRLGDNIPIIGLTATATPKVQEDIIKNLGMVDAKVFKASFNRPNLFYEV 216
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K + AD+ +K N IVYCL R +EL+ L GIS YHAG + K
Sbjct: 217 RPK--TKNVDADIIRFVKQNSGKSGIVYCLSRKKVEELAQVLQVNGISAVPYHAGFDAKT 274
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 275 RAKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEG 334
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L YY D ++E +S E+ +++ ++V Y E S RRK I
Sbjct: 335 HCLAYYAYKDVEKLEKFMSGK--------PVAEQEIGQAL--LQEIVAYAETSMSRRKFI 384
Query: 304 LESFGEQ 310
L FGE+
Sbjct: 385 LHYFGEE 391
>gi|254425231|ref|ZP_05038949.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
gi|196192720|gb|EDX87684.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 7335]
Length = 738
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 187/321 (58%), Gaps = 18/321 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
+DL GK +++LY+ PE T F LK++ + ++ AIDEAHC+S WGHDFRP Y
Sbjct: 104 KDLLMGK--IKILYIAPERLFTSSFHDFLKQLSQKVGISTFAIDEAHCVSEWGHDFRPEY 161
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
R+L ++ P +PI+ALTATA +V+ D+++ L L +P V SSFNR NL+YEV K
Sbjct: 162 RQLFQIKQLYPQIPIIALTATATQRVRTDIVQQLRLNDPTVYISSFNRQNLYYEVIQKS- 220
Query: 129 LDDAYADLCSVLKANGDT---CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
Y L + ++ + I+YCL R DE+S L+ GIS YHAGL + R
Sbjct: 221 -RKPYQQLLAKIQQHQGKEKGAGIIYCLSRKHVDEVSNNLTKDGISALPYHAGLTNTQRE 279
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ +I Q++VATVAFGMGI++ DVR V H+++P+++E++YQESGRAGRD +
Sbjct: 280 NNQTKFIRDDVQIIVATVAFGMGINKPDVRFVIHYDLPRNLESYYQESGRAGRDSEAASC 339
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +G D + +++ + Q + ++ +Q++ Y E CRR+ L
Sbjct: 340 TILFGWGDVHTVRYLIGQKADPGEQRIAQQQ---------LNQIISYAESPICRRQVQLN 390
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGEQ + C N+CD C P
Sbjct: 391 YFGEQF-IPPC-NNCDNCLSP 409
>gi|149239801|ref|XP_001525776.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449899|gb|EDK44155.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1317
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 188/314 (59%), Gaps = 14/314 (4%)
Query: 18 LRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE + ++ K++ R L V IDEAHC+SSWGHDFRP Y+ +S +
Sbjct: 896 LDIVYLSPEKANKSSMIQRIISKLYERNQLARVVIDEAHCLSSWGHDFRPDYKGMSFFKE 955
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY--KDLLDDAYA 134
P VP++ALTATA KV+ D++ +L L +P+ LK SFNR NL YE+++ KD L+D
Sbjct: 956 NFPSVPVMALTATANEKVRMDIIHNLKLNSPVFLKQSFNRTNLLYEIKWKKKDYLEDIKT 1015
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ + + I++C + C++ S+ L+ G+S YHAG++ + R W +
Sbjct: 1016 YIMTRFPR---STGILFCNSKQACEDTSSKLNELGLSTGFYHAGMSTEDRFQAQHLWQTG 1072
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ +++ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD S+ +LYY D
Sbjct: 1073 KTRIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKASECILYYCYRDA 1132
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPV 313
R ++ ++ +++ + E + ++ Q+V YCE + CRR+++L F E
Sbjct: 1133 RSLQNLIHRDE-------NLTEEGKENHLAKLRQVVQYCENTTDCRRQQVLHYFNESFNP 1185
Query: 314 SLCKNSCDACKHPN 327
CK CD CK+ N
Sbjct: 1186 VDCKKQCDNCKNYN 1199
>gi|154248226|ref|YP_001419184.1| ATP-dependent DNA helicase RecQ [Xanthobacter autotrophicus Py2]
gi|154162311|gb|ABS69527.1| ATP-dependent DNA helicase RecQ [Xanthobacter autotrophicus Py2]
Length = 607
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 185/310 (59%), Gaps = 19/310 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE T F++ L ++L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 115 LDLLYVAPERLLTDSFLTLLDGAR----ISLFAIDEAHCVSQWGHDFRPEYRQLTILHER 170
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP LALTATA ++++ME L L+ V SSF+RPN+ Y + K + A L
Sbjct: 171 FPGVPRLALTATADGPTRREIMERLALEEGRVFLSSFDRPNIRYRIEPKA---NPRAQLR 227
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ L A+ D IVYC+ R + + LS G + YHAGL+ R+ D ++
Sbjct: 228 AFLDAHADEAGIVYCMSRAKVEATAEILSTEGRTALPYHAGLDADTRARHQDRFLKEEGV 287
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++PKS+EA+YQE+GRAGRD LPS++LL YG++D ++
Sbjct: 288 VMVATVAFGMGIDKPDVRFVVHLDLPKSIEAYYQETGRAGRDGLPSEALLLYGVEDVAKL 347
Query: 258 -EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+F+ ++S S R+R + + ++ CE + CRR+ +L+ F E +P C
Sbjct: 348 IQFV------ESSDSPEARKRVERGKL---DALLGLCETASCRRQVLLKYFEEDLP-EPC 397
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 398 GN-CDTCLSP 406
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 185/327 (56%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+K Y L P ++LLYVTPE + A+ +S L+ +++R LL IDEAHC+S WGHD
Sbjct: 518 SKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALENLYNRKLLARFVIDEAHCVSQWGHD 577
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD+ L + P V SFNR NL Y+V
Sbjct: 578 FRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDV 637
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +A L G++ AYHAGL D
Sbjct: 638 LPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 697
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 698 RDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEM 757
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 758 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVDCRRI 810
Query: 302 KILESFGEQ-IPVSLCKNS----CDAC 323
++L FGE + CK+ CD C
Sbjct: 811 QLLAYFGETDFNPNFCKDHPEVICDNC 837
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 185/327 (56%), Gaps = 19/327 (5%)
Query: 7 IYEDLDSGKPS--LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
I L S P + LLY+TPE+ + + +++K+ S L V IDEAHC+S WGHD
Sbjct: 786 IMSTLSSHNPETHIELLYITPEMISKSHALTDRIEKLCSIQKLARVVIDEAHCVSQWGHD 845
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y+++ + R +P VP++ALTATA V+ DV+ +L +Q V SFNRPNL YEV
Sbjct: 846 FRPDYKQIGAFRARIPGVPLMALTATATENVKVDVIHNLRMQGCEVFTQSFNRPNLTYEV 905
Query: 124 RYK----DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAG 178
R K +LLD + S + + C IVYCL R TC++++ L I YHAG
Sbjct: 906 RRKGKHAELLDSIADTIKSTYR---NKCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHAG 962
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L+ + R+ W + V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGR
Sbjct: 963 LDAETRARTQQRWQAGDVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGR 1022
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG- 297
D S LY+ D M+ ++ KN+ + + R + +V YCE +
Sbjct: 1023 DGRRSGCYLYFSHRDVSTMQSMIEKNEDSDDVQKGRQTRM-------LNDVVKYCENAND 1075
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACK 324
CRR +IL F E C SCD CK
Sbjct: 1076 CRRVQILAYFSESFKRQDCNASCDNCK 1102
>gi|194332913|ref|YP_002014773.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM
271]
gi|194310731|gb|ACF45126.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM
271]
Length = 617
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 176/306 (57%), Gaps = 17/306 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE + F + LK++ +++ IDEAHCIS WGHDFRP Y LS+L
Sbjct: 117 LDLLYVAPERFSLEHFQTVLKEVK----ISMAVIDEAHCISEWGHDFRPDYLSLSALVEL 172
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PDVP+ A TATA KVQ D++ L L++P V+++SF+RPNL Y+VR+K D+ L
Sbjct: 173 FPDVPVAAFTATATHKVQADILRKLGLRDPFVVRASFDRPNLTYDVRFK---DNVSEQLV 229
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+LK++ I+Y R + +E +A L A G YHAGL D+ R + +I
Sbjct: 230 GLLKSSPGKAGIIYRTSRKSVNETTAMLQAKGFRALPYHAGLGDEERKKNQETFIRDEAD 289
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ ++R V H ++PKS+E +YQE+GRAGRD P+ L + D ++
Sbjct: 290 VIVATVAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAHCTLLFSQGDIPKV 349
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
F + E K++ ++V + S CRR +L+ FGE P C
Sbjct: 350 RFFIDT---------IIDETERNKALDALQRVVSFASTSVCRRITLLDYFGESYPKENC- 399
Query: 318 NSCDAC 323
SCD C
Sbjct: 400 GSCDIC 405
>gi|242022338|ref|XP_002431597.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
gi|212516905|gb|EEB18859.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
Length = 652
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/318 (41%), Positives = 177/318 (55%), Gaps = 20/318 (6%)
Query: 16 PSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
P +L+YVTPE L + FMS+L+K H +G +AIDE HC S+WGHDFRP Y L L
Sbjct: 173 PKHKLIYVTPEKLAKSKRFMSQLQKCHQQGRFTRLAIDEVHCCSTWGHDFRPDYNYLGIL 232
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
++ P VP+L LTAT+ KV DV + L +Q LV+K++FNRPNL+YEV K
Sbjct: 233 KDMFPGVPLLGLTATSTSKVTADVQKMLNIQGCLVIKATFNRPNLYYEVVLKPSSQSENL 292
Query: 135 DLCSVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
DL N + I+Y C+EL+ L GI YHA L+ + RS + W+
Sbjct: 293 DLLENWLKNKFSNKSGIIYTTAIKECEELTKELRKRGIKAGVYHAMLDAEVRSKMHTKWM 352
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
S+ QV+VATVAFGMGID+ DVR V H ++ KSME FYQESGRAGRD S ++ + +
Sbjct: 353 SNEYQVIVATVAFGMGIDKPDVRFVIHHSLSKSMENFYQESGRAGRDGKNSHCIVMFRLA 412
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRKKILESFGEQI 311
D ++ ST + +K + + M+++C CRR I E F E
Sbjct: 413 DVFKL---------------STMVFTQQKGLENLYSMLNFCLNNDTCRRSLIAEHFDEVW 457
Query: 312 PVSLCKNSCDACK-HPNL 328
+ C CD CK PN
Sbjct: 458 NSNFCNKMCDHCKEEPNF 475
>gi|110636721|ref|YP_676928.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
Length = 725
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/309 (42%), Positives = 182/309 (58%), Gaps = 20/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + LKK ++ VAIDEAHCIS WGHDFRP YRK+ S+
Sbjct: 112 IKLLYVAPESLTKEDNILFLKK----AAISFVAIDEAHCISEWGHDFRPEYRKIHSIIES 167
Query: 78 LPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
+ + +PI+ALTATA PKVQ D+ ++L + + ++ KSSFNR NLFYEVR K D L
Sbjct: 168 INNNIPIIALTATATPKVQLDIQKNLQMDDAVLFKSSFNRENLFYEVRPKG---DTKKKL 224
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+KA I+YCL R +E++ L + YHAGL R D +++
Sbjct: 225 IKFIKARKGQSGIIYCLSRKKVEEIAELLRVNDVKALPYHAGLEPAVRMGNQDAFLNEDA 284
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
V+VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L++Y M+D +
Sbjct: 285 DVIVATIAFGMGIDKPDVRFVVHYDTPKSLEGYYQETGRAGRDGNEGHCLMFYSMNDIIK 344
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+E K ++ + ER + + + ++M Y E S CRRK++L FGE + C
Sbjct: 345 LE--------KFNKDKTVTERENARQL--LNEMSSYAESSVCRRKQLLFYFGENLADD-C 393
Query: 317 KNSCDACKH 325
CD CK+
Sbjct: 394 -GFCDNCKN 401
>gi|398388894|ref|XP_003847908.1| hypothetical protein MYCGRDRAFT_111447 [Zymoseptoria tritici
IPO323]
gi|339467782|gb|EGP82884.1| hypothetical protein MYCGRDRAFT_111447 [Zymoseptoria tritici
IPO323]
Length = 486
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 196/358 (54%), Gaps = 29/358 (8%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
M VK I DL SG P RLLYVTPE A F L+ ++ + L +A+DEAHCIS W
Sbjct: 102 MSVKNNILNDLKSGHPLTRLLYVTPEYCAMDHFRRNLRIVYEQKELARIAVDEAHCISEW 161
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS---SFNRP 117
GHDFRPS+++L R PDVP++ TATA +V+ DV+ +L L + LKS + +RP
Sbjct: 162 GHDFRPSFKELKFFRAEFPDVPVICCTATATSRVRDDVISTLGL-DSTKLKSFTMTTSRP 220
Query: 118 NLFYEVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERT 156
NL YE+R+ +D Y + + LK+ + + I Y R
Sbjct: 221 NLHYELRFTSDEEDRYDNFLAWLKSTHARRANNAARSQELTQRNERSTNVPGICYTWYRK 280
Query: 157 TCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDV 214
+ L++ L + GI AYHAGL+ + + L+ W+ +R+ V+VAT AFGMGID+++V
Sbjct: 281 DTEALTSRLQSDGIGAKAYHAGLSTEQKEDHLEGWVKNREGYDVIVATTAFGMGIDKENV 340
Query: 215 RLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFST 274
R V H+ IPKS E +YQE+GRAGRD S ++YY +DR R ++ + K + +
Sbjct: 341 RFVVHWQIPKSFEGYYQEAGRAGRDGKASICIMYYSREDRDRAASMIQREMEKQNNAKGQ 400
Query: 275 RERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
++ ++ YCE S CR I + FGE+ C+ +CD K LLA+
Sbjct: 401 NRQAMINRGKSLQALIHYCENVSACRHALIAKYFGEE-GTPPCEWACDWHKDAKLLAR 457
>gi|198276172|ref|ZP_03208703.1| hypothetical protein BACPLE_02361 [Bacteroides plebeius DSM 17135]
gi|198270984|gb|EDY95254.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 727
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 184/321 (57%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE + L+ + ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKADIMAGKT--KLLYVAPESLTKEENVDFLRHVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKV+ D+ ++L + + +SSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGKAPVIALTATATPKVKMDIQKNLGMMDATEFRSSFNRPNLYYEVRA 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K N I+YCL R +EL+ L A GI AYHAG++ R+
Sbjct: 217 KSANVDK--DIIKFIKQNEGKSGIIYCLSRKKVEELTEILLANGIKARAYHAGMDSATRN 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD +
Sbjct: 275 GNQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ + + + Y E S CRRK +L
Sbjct: 335 ITFYSNKDLQKLE--------KFMQGKPISEQEIGRQL--LQETAAYAESSVCRRKILLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 385 YFGEEYTEDNCGN-CDNCLNP 404
>gi|164655522|ref|XP_001728890.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
gi|159102778|gb|EDP41676.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
Length = 841
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/376 (36%), Positives = 207/376 (55%), Gaps = 32/376 (8%)
Query: 17 SLRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
++RLLYVTPE + S+L + ++ L IDEAHC+ WGHDFRP Y +L+ LR
Sbjct: 290 NVRLLYVTPEFISKSRLASQLLQHLYQTHQLARFVIDEAHCVDQWGHDFRPDYVRLNLLR 349
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
P VPI+ALTATA + + +SL ++N LVL+ SFNRPNL Y+V K
Sbjct: 350 KTYPTVPIMALTATARIDTVQSIQQSLGMRNALVLRQSFNRPNLTYKVCPKMRGSATLET 409
Query: 136 LCSVL-KANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWIS 193
+ +++ K + + C I+YCL R C+ +S L GI +HAGLN + + + + W +
Sbjct: 410 IAAIIQKHHANECGIIYCLSRRDCENVSTDLGNKYGIQARHFHAGLNIEDKLRIQEGWEA 469
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
+V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +L++ M+D
Sbjct: 470 GTFKVIVATIAFGMGIDKADVRFVIHHSMPKSLEGYYQETGRAGRDGKWSDCILFWSMED 529
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIP 312
R++E ++ ++ +++ + I Q+ +CE + CRR IL+ FGE+
Sbjct: 530 SRKLEAMIDESPDASAE-------QKRLQIKSLYQVRTFCESLTECRRTNILKYFGEKFD 582
Query: 313 VSLCKNSCDACKHPNL-----------LAKYLGELTSAVLQKN--------HFSQIFISS 353
LC SCD C+ A + +T Q+N HF +F S
Sbjct: 583 PKLCHASCDNCQRSPAHCVDMTTSAKDFANMVKLITQQRQQRNSPPRFTRIHFVNVFRGS 642
Query: 354 Q--DMTDGGQYSEFWN 367
Q ++ D G + ++
Sbjct: 643 QRKEVKDHGHHHNLYH 658
>gi|307942792|ref|ZP_07658137.1| ATP-dependent DNA helicase RecQ [Roseibium sp. TrichSKD4]
gi|307773588|gb|EFO32804.1| ATP-dependent DNA helicase RecQ [Roseibium sp. TrichSKD4]
Length = 627
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 188/326 (57%), Gaps = 25/326 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +IY D+ + +L LLYVTPE AT GF L + L+L AIDEAHC+S WGHD
Sbjct: 118 RDEIYRDIR--EETLDLLYVTPERLATEGFRRVLDTVR----LSLFAIDEAHCVSQWGHD 171
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y LS L + P VP +ALTATA P Q+D+ E L L+ V +SF+RPN+ YE+
Sbjct: 172 FRPEYLSLSLLTDRYPGVPRVALTATADPHTQRDLQERLRLEQADVFITSFDRPNIRYEI 231
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ + L L + IVYCL R ++++ +L A GI YHAGL +
Sbjct: 232 VERT---NQRQQLLDFLNRHKGESGIVYCLSRAKVEDIAEWLCAKGIKALPYHAGLPAEM 288
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R++ D ++ +VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD PS
Sbjct: 289 RAANQDAFLLEEGLCLVATVAFGMGIDKPDVRFVAHLDLPSSVEAYYQETGRAGRDGEPS 348
Query: 244 KSLLYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
++ + YGM D RRRM +++ + + + + + ++ CE +GCRR
Sbjct: 349 EAFMAYGMADVVQRRRM---IAEGDAPDE--------IKRAEQAKLNALLGICETAGCRR 397
Query: 301 KKILESFGEQIPVSLCKNSCDACKHP 326
+ +L FGE P C N CD C P
Sbjct: 398 QALLAHFGETYP-KPCGN-CDTCLSP 421
>gi|294658176|ref|XP_460513.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
gi|202952930|emb|CAG88826.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
Length = 1367
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 186/309 (60%), Gaps = 12/309 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ A+ + K++ L V +DEAHC+SSWGHDFRP Y+ ++ ++
Sbjct: 722 LDLVYLSPEMINASQHIQRIITKLYDMNELARVVVDEAHCVSSWGHDFRPDYKGMNYFKH 781
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA KV+ D++ L + NP++LK SFNR NLFYE+++K +
Sbjct: 782 NYPKVPVMALTATANEKVRMDIIHHLKMDNPILLKQSFNRLNLFYEIKWKTSNTLEWIK- 840
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+L + I+YC + +C+ S L+ G++ + YHAGL+ R + + W +
Sbjct: 841 NYILTKQVNKTGIIYCHSKQSCEHTSEKLNEWGVNASYYHAGLSPTDRFEIQNKWQQNEL 900
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
Q++ AT+AFGMGID+ DVR V H IP+++E +YQE+GRAGRD S+ +++Y D R
Sbjct: 901 QIICATIAFGMGIDKPDVRYVIHLFIPRTLEGYYQETGRAGRDGAYSECIMFYSYKDARS 960
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKS-ISDFSQMVDYCEG-SGCRRKKILESFGEQIPVS 314
++ ++ +++ +R K++ ++ Q+V YCE + CRRK++L F EQ
Sbjct: 961 LQNMIQRDEE--------LDREGKENHLAKLRQVVQYCENTTDCRRKQVLHYFNEQFNPI 1012
Query: 315 LCKNSCDAC 323
C CD C
Sbjct: 1013 TCNKKCDNC 1021
>gi|361124241|gb|EHK96347.1| putative Bloom syndrome protein [Glarea lozoyensis 74030]
Length = 380
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/315 (42%), Positives = 184/315 (58%), Gaps = 28/315 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
K ++ DL +G P RLLYVTPE AT F L ++ + L +A+DEAHCIS WGHD
Sbjct: 28 KQRLLRDLATGHPFTRLLYVTPEQCATDSFKRHLGVVYEQRELARIAVDEAHCISEWGHD 87
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQ--NPLVLKSSFNRPNLFY 121
FRPS+++L R LPDVPI+ LTATA PKV++DV+ +L L N V + +R N+ Y
Sbjct: 88 FRPSFKQLKWFRQNLPDVPIICLTATATPKVRQDVITTLGLSEANLKVFTMTTSRKNIHY 147
Query: 122 EVRYKDLLDDAYADLCSVLKA-----------------NGD----TCAIVYCLERTTCDE 160
EVR+K +D Y+D LK N + I+Y L R C+
Sbjct: 148 EVRFKSDEEDHYSDFLRWLKGIHKRRSENPARRAELEKNNERLDNVSGIIYTLFRNDCEA 207
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVC 218
L+A L + GI YHAGL + ++ L W+++ K VVVAT AFGMGID+++VR V
Sbjct: 208 LAARLRSDGIGAKPYHAGLPNDEKNETLHRWVNNDKGYDVVVATTAFGMGIDKENVRFVV 267
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERS 278
H+ +PKS E FYQE+GRAGRD S +LYY +DR R LSK K+S + +R S
Sbjct: 268 HWQLPKSFEGFYQEAGRAGRDGKASACVLYYSREDRDRAYSRLSK--EKDSSNLESR-LS 324
Query: 279 SKKSISDFSQMVDYC 293
S +++ +S+ D C
Sbjct: 325 SLQALVKYSEATDTC 339
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 192/333 (57%), Gaps = 11/333 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I ++L S +LLYVTPE A + + L+ ++SR LL IDEAHC+S WGHDF
Sbjct: 575 EILQELSSENSKYKLLYVTPEKVAKSESLIRHLEILNSRSLLARFVIDEAHCVSQWGHDF 634
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y+ L L+ P++P+LALTATA V++DV+++L L N +V + SFNRPNL+Y V
Sbjct: 635 RPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSFNRPNLWYSVV 694
Query: 125 YKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + D+ ++ N D C I+YCL R C++++ L A G A YH ++
Sbjct: 695 PK--TNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEMLRAFGHKAAFYHGSMDPGK 752
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S
Sbjct: 753 RAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRS 812
Query: 244 KSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSSK---KSISDFSQMVDYCEGS- 296
+LYY D R++ ++S+ Q + ++ + S + + + +MV YCE
Sbjct: 813 SCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENEV 872
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHPNLL 329
CRR L GE+ + CK +CD C +L
Sbjct: 873 DCRRFLQLVHLGEKFDSTNCKKTCDNCSSSKIL 905
>gi|365122666|ref|ZP_09339566.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363642172|gb|EHL81539.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 726
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 187/321 (58%), Gaps = 19/321 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ +G+ +LLYV PE + LK++ ++ A+DEAHCIS WGHDFR
Sbjct: 103 QVKDDIMAGRT--KLLYVAPESLTKEENIEFLKQVK----ISFYAVDEAHCISEWGHDFR 156
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR++ + N + P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YEVR
Sbjct: 157 PEYRRIRPIINEIGSHPLIALTATATPKVQHDIQKNLGMIDAEVFKSSFNRPNLYYEVRP 216
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K D D+ +K+ I+YCL R +EL+ L GI+ YHAG++ R+
Sbjct: 217 KTQNIDR--DIIKYIKSQSGKSGIIYCLSRKKVEELAETLKVNGINALPYHAGMDSATRT 274
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ + V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD +
Sbjct: 275 QNQDAFLLEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQC 334
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +Y D +++E K Q E+ K + + Y E S CRRK +L
Sbjct: 335 ITFYINKDLQKLE--------KFMQGKPIAEQEIGKQL--LLETAAYAESSVCRRKLLLH 384
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE+ C N CD C +P
Sbjct: 385 YFGEEYGEENCGN-CDNCLNP 404
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/309 (41%), Positives = 184/309 (59%), Gaps = 22/309 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + LK ++ VAIDEAHCIS WGHDFRP YRK+ S+ +
Sbjct: 109 KLLYVAPESLTKEENVKFLKSAD----ISFVAIDEAHCISEWGHDFRPEYRKIKSIIAQI 164
Query: 79 PD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
D +P++ALTATA PKVQ+D+ +L ++ + KSSFNR NL+YEVR K + + ++
Sbjct: 165 GDNLPVIALTATATPKVQQDIQRNLQMEEADLFKSSFNRTNLYYEVRPK-VKSETKKEII 223
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K+ I+YCL R E++ L GI+ A YHAGL+ R DD+++
Sbjct: 224 KYIKSQKGKSGIIYCLSRKKVTEIAELLKVNGINAAPYHAGLDGHVRVKNQDDFLNEEVD 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GR+GRD L L++Y +D ++
Sbjct: 284 VIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRSGRDGLEGHCLMFYRYEDIIKL 343
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
E K ++ ER + + + +M Y E S CRR+ +L FGE +L K
Sbjct: 344 E--------KFNKDKPVNERENARVL--LQEMAAYAESSVCRRRFLLHYFGE----TLSK 389
Query: 318 N--SCDACK 324
+ CD CK
Sbjct: 390 DCGFCDNCK 398
>gi|344202287|ref|YP_004787430.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
gi|343954209|gb|AEM70008.1| ATP-dependent DNA helicase RecQ [Muricauda ruestringensis DSM
13258]
Length = 695
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 186/309 (60%), Gaps = 23/309 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE + P M L + + ++L A+DEAHCIS+WGHDFRP+Y +L L+
Sbjct: 111 IKLLYVAPE--SLPHLMPFLTEDN----VSLFAVDEAHCISAWGHDFRPAYTQLGKLKEV 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VPI A TATA Q D+++ L + N +SF+R NLF EVR + + +
Sbjct: 165 FPNVPIAAFTATADSATQDDILKQLNITNAERHIASFDRKNLFLEVRPGT---NRFTQIV 221
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ D I+YCL R ++L+ L+ G AYHAG++ +AR+ V +D+++ R
Sbjct: 222 RFLEQRTDQSGIIYCLSRKGTEKLAEKLNNNGFKAQAYHAGMDTEARNQVQEDFVNDRTP 281
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VAT+AFGMGID+ +VR V H+N+PK++E++YQE GR+GRD+LP+ +LL+Y D ++
Sbjct: 282 IIVATIAFGMGIDKSNVRWVIHYNMPKNIESYYQEIGRSGRDRLPANTLLFYSFSDVIQL 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+ ++++K Q ++ +M + E CRR +L FGE + + C
Sbjct: 342 RKFIEESETKEVQ------------LAKLERMQQFAEALSCRRIALLNYFGEHVSEN-CG 388
Query: 318 NSCDACKHP 326
N CD CK P
Sbjct: 389 N-CDNCKTP 396
>gi|284040794|ref|YP_003390724.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283820087|gb|ADB41925.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 736
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 122/298 (40%), Positives = 181/298 (60%), Gaps = 17/298 (5%)
Query: 12 DSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
D+ +L+LLY+ PE + LKK + ++ VAIDEAHCIS WGHDFRP YRK+
Sbjct: 109 DTLNGTLKLLYIAPESLTKEENLDFLKKAN----ISFVAIDEAHCISEWGHDFRPEYRKI 164
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
+ + + ++P++ALTATA PKVQ+D+ ++L +++ + K+SFNR NL+YE+R K D
Sbjct: 165 RGIVDNIGNLPVIALTATATPKVQQDIQKNLQMEDANLYKTSFNRKNLYYEIRPKV---D 221
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
A L +K N I+YCL R T +E++ L + YHAGL+ R + D +
Sbjct: 222 AKKQLIKYIKQNKGKSGIIYCLSRKTVEEIAELLRVNDVKALPYHAGLDPVTRMNNQDAF 281
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
++ V+ AT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L L++Y
Sbjct: 282 LNEDVDVICATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEGNCLMFYSF 341
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE 309
DD ++E K ++ ER + K + ++MV Y CRR+++L FGE
Sbjct: 342 DDIVKLE--------KFNKDKPVTERDNAKHL--LTEMVSYANLGVCRRRQLLGYFGE 389
>gi|408674061|ref|YP_006873809.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387855685|gb|AFK03782.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 190/323 (58%), Gaps = 22/323 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T++ D+ SG +LLY+ PE ++ LKK L+ +A+DEAHCIS WGHDF
Sbjct: 102 TRVKNDVMSG--DCKLLYIAPESLTKEDNLTFLKKAK----LSFIAVDEAHCISEWGHDF 155
Query: 65 RPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
RP YR++ + + + P++PI+ALTATA PKVQ+D+ ++L ++ + KSSFNR NL+YE+
Sbjct: 156 RPEYRRIRGIIDDIDPNLPIIALTATATPKVQQDIQKNLSMEQSHIFKSSFNRKNLYYEI 215
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R K D+ L + N I+YCL R +E++ L+ GI YHAGL+
Sbjct: 216 RPKI---DSKKQLIKYIANNKGKSGIIYCLSRKKVEEIAGLLNVNGIKALPYHAGLDADT 272
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R D +++ ++VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L
Sbjct: 273 RMKNQDAFLNEECDIIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGRDGLEG 332
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L++Y DD ++E K ++ + ER + +++ +MV Y CRR+++
Sbjct: 333 NCLMFYAYDDILKLE--------KFNKDKTVTERDNARAL--LMEMVAYSNLGVCRRRQL 382
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C CD C P
Sbjct: 383 LSYFGEYTDKD-C-GFCDNCIKP 403
>gi|423261207|ref|ZP_17242109.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267342|ref|ZP_17246324.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|387774449|gb|EIK36560.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392698045|gb|EIY91228.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
Length = 601
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 182/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 104 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 159 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R+ DD+I+ R +
Sbjct: 219 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIE 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 336 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGE-TATEDCG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|365119359|ref|ZP_09337481.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363648680|gb|EHL87834.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 709
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 190/340 (55%), Gaps = 25/340 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
LRLLY++PE M ++ + ++L AIDEAHCIS WGHDFRP Y +LS L+ Y
Sbjct: 111 LRLLYISPE-----RLMGEIDGLLREMNISLFAIDEAHCISQWGHDFRPEYNRLSVLKKY 165
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA ++D++ L + NP V SSF+RPNL VR + +
Sbjct: 166 FPKVPLMALTATADKLTREDIVTQLAMDNPQVFISSFDRPNLTLSVRKNLNKKQKLSAIL 225
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
S ++ + I+YC+ R + + L LS GIS AYHAGL+ + R + +++ R Q
Sbjct: 226 SFIEQHPRQSGIIYCMSRNSTEILVRELSQYGISVTAYHAGLSSRERETAQQAFLNDRVQ 285
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++ AT+AFGMGID+ +VR V H+N+PKS+E +YQE GRAGRD + +LL+Y + D
Sbjct: 286 IICATIAFGMGIDKSNVRWVIHYNMPKSIECYYQEIGRAGRDGMKGDTLLFYSLGD---- 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+LSK F+ K ++ +M Y E CRR+ +L FGE + C
Sbjct: 342 VVMLSK--------FAEESGQKKINLEKLRRMQQYAESPICRRRILLSYFGETVDHD-CG 392
Query: 318 NSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMT 357
N CD CK+P +VL + S I + Q +T
Sbjct: 393 N-CDVCKNPP------QRFDGSVLAQKALSAIVRTEQQVT 425
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 131/311 (42%), Positives = 183/311 (58%), Gaps = 15/311 (4%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LYVTPE L+ +S +++HS G L + IDEAHC+S WGHDFRP Y+ L +
Sbjct: 948 IQILYVTPEMLSKNQRMISAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVR 1007
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL-LDDAYAD 135
P VP++ALTATA V+ DV+ +L +Q SFNRPNL YEV K + ++ AD
Sbjct: 1008 QFPGVPVIALTATATQLVRTDVVANLGIQGCRQYSQSFNRPNLSYEVLPKGKGVINSIAD 1067
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L K G + I+YCL R TC++++ LS GI YHAG++ RS V W +
Sbjct: 1068 LIKE-KYTGKS-GIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSEVQRKWQKNE 1125
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S+ LYY D R
Sbjct: 1126 YHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYMYGDSR 1185
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGSG-CRRKKILESFGEQIPV 313
+ ++ + + R K+ ++D +V YCE CRR ++L F E
Sbjct: 1186 ILRKMIDEGEG---------SREQKQRLNDMLRTVVQYCENKADCRRAQVLGYFSEAFDA 1236
Query: 314 SLCKNSCDACK 324
S C N+CD C+
Sbjct: 1237 SKCNNTCDNCR 1247
>gi|399026913|ref|ZP_10728551.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398075677|gb|EJL66783.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 731
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 181/306 (59%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE +++ L+ + ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKKDITSGLT--KLLYVAPESLTKEEYVAFLQSVP----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L VPI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLKNIIKQLGSVPIIGLTATATPKVQEDILKNLDMSDANTFKASFNRPNLYYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K + I+YCL R + ++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNIESDIIRFIKQHKGKSGIIYCLSRKKVETIAEVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFMSGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFLL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|409401711|ref|ZP_11251398.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
gi|409129597|gb|EKM99441.1| ATP-dependent DNA helicase RecQ [Acidocella sp. MX-AZ02]
Length = 609
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 192/324 (59%), Gaps = 20/324 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL +G+ L+LLY PE P F+ + + L+AIDEAHC+S WGHD
Sbjct: 104 RAQVRSDLRAGR--LKLLYAAPERLLMPDFLEMMDGAR----IALIAIDEAHCVSQWGHD 157
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y LS L P VP +ALTATA P+ ++D+ + L L+ + SSF+RPN+ Y V
Sbjct: 158 FRPEYLGLSQLAERFPGVPRMALTATADPQTRQDIAQRLGLEEAPLFLSSFDRPNIRYAV 217
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K + L + L+A+ IVYCL R + ++ +A L+ GI YHAG+ +
Sbjct: 218 LRK---EAPLRQLQTFLRAHEGESGIVYCLSRNSVEQTAAALNQHGIRALPYHAGMPAET 274
Query: 184 RSSVLDDWISSRKQ-VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R++ D+++++ + V+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LP
Sbjct: 275 RAANQDEFLTTEEGLVLVATVAFGMGIDKPDVRFVVHLDLPSSLEAYYQETGRAGRDGLP 334
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKK 302
+++LL YGM D +L + + S + + ++ ++ + ++ CE CRR+
Sbjct: 335 AETLLLYGMQD-----LVLRRGMIEQSNAPAEIKQVERRKLDS---LLGVCETITCRRQA 386
Query: 303 ILESFGEQIPVSLCKNSCDACKHP 326
IL FGE + C N CD C P
Sbjct: 387 ILAHFGETL-AQPCGN-CDNCITP 408
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/311 (40%), Positives = 182/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + + L+K++ R L + IDEAHC+S WGHDFRP Y+ L +R+
Sbjct: 833 IELLYITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRD 892
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K + ++
Sbjct: 893 QLPGVPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENI 952
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELS-AYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
++K + + I+YCL R TC+ ++ A S I YHAG++ R+ V + W S
Sbjct: 953 ADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSG 1012
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 1013 RVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDA 1072
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+R +++ + YC + CRR +IL F E
Sbjct: 1073 TSIMSMIDKGEGGKQQ--KNRQRQMLRNV------MQYCLNLADCRRVQILAYFNEYFRQ 1124
Query: 314 SLCKNSCDACK 324
+ C SCD CK
Sbjct: 1125 NDCNKSCDNCK 1135
>gi|265765824|ref|ZP_06093865.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|263253492|gb|EEZ24957.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
Length = 607
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 181/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 110 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 165 FPNVPMIALTATADKITREDIIRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 225 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y + D
Sbjct: 285 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL--- 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 342 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 391
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 392 N-CDVCRNP 399
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/318 (38%), Positives = 180/318 (56%), Gaps = 12/318 (3%)
Query: 13 SGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
GK +++ ++VTPE +T + F L + + +V IDEAHCIS WGHDFR SY+KL
Sbjct: 535 EGKCTIKFVFVTPERITQSKSFKEALNRYYENNNFGMVVIDEAHCISQWGHDFRDSYQKL 594
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR--YKDLL 129
S P +PIL LTATA +V+ D++ SL + +V SFNR NL Y VR K ++
Sbjct: 595 SVFSQEYPGIPILMLTATATERVKNDILLSLGINEAVVFSQSFNRKNLTYCVRPKTKGVI 654
Query: 130 DDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D+ + K I+YCL + +++ L+ GI YHAG++ K R+ V
Sbjct: 655 DEIEEMIKRKYKGQ---SGIIYCLSQKNTMDVAQELNKRGIKSKYYHAGMDTKERTKVQK 711
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
+W V+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD P+ +LYY
Sbjct: 712 EWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGRDGEPADCILYY 771
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFG 308
D+ E K++ N + + ++ ++++ YCE + CRR +L+ FG
Sbjct: 772 NYRDKYTYERFFEKDKENNGDLSHIQ-----TARNNLNEVISYCENTVDCRRTLVLQYFG 826
Query: 309 EQIPVSLCKNSCDACKHP 326
E LC +CD C +P
Sbjct: 827 EIFNSKLCNKTCDNCYNP 844
>gi|392399436|ref|YP_006436037.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390530514|gb|AFM06244.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 729
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 175/293 (59%), Gaps = 17/293 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE P + L K + L+ +AIDEAHCIS WGHDFRP YR++ + + L
Sbjct: 112 KLLYVAPESLTKPENLDFLAKAN----LSFIAIDEAHCISEWGHDFRPEYRRIRFIVDSL 167
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
D+PI+ALTATA PKVQ+D+ ++L +++ V K+SFNR NL+YEVR K + L
Sbjct: 168 GDLPIIALTATATPKVQQDIQKNLHMEDANVFKTSFNRQNLYYEVRPKT---NVKKQLIK 224
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
LK I+YCL R +E+ +L I YHAGL+ R D +++ +
Sbjct: 225 YLKGKKGQSGIIYCLSRKKVEEIHEFLKVNDIKSRPYHAGLDSSIRMQNQDAFLNEEVDI 284
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGRD L + +++Y +D ++E
Sbjct: 285 IVATIAFGMGIDKPDVRCVIHYDAPKSLEGYYQETGRAGRDGLNADCIMFYSPEDIHKLE 344
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
K ++ ER + + + +M DY CRR+++L FGE +
Sbjct: 345 --------KFNKDKPVTERDNARYL--LQEMADYATSGVCRRRQLLHYFGENV 387
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 200/353 (56%), Gaps = 18/353 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L S +LLYVTPE A + L+ +++RGLL + IDEAHC+S WGH
Sbjct: 538 QQEILRELSSDYCKYKLLYVTPEKVAKSDVLLRNLESLNARGLLARIVIDEAHCVSQWGH 597
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y++L L+ P+LALTATA V++DV+++L L + ++ + SFNRPNL+Y
Sbjct: 598 DFRPDYKELGILKKKFEKTPVLALTATATASVKEDVVQALGLVDCIIFRQSFNRPNLWYS 657
Query: 123 V--RYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V + K LDD + +K N D C I+YCL R C++++ L G A YH +
Sbjct: 658 VVPKTKKCLDD----IDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNM 713
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 714 DAAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRD 773
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQ--------SFSTRERSSKKSISDFSQMVD 291
L S +LYY D R++ ++ + Q + S + + +R +K+ + +MV
Sbjct: 774 GLRSSCVLYYSYSDYIRVKHMIVQGQIEQSPWTPGYNRINNTNSDRILEKNTENLLRMVS 833
Query: 292 YCEGS-GCRRKKILESFGEQIPVSLCKNSCDACKH-PNLLAKYLGELTSAVLQ 342
YCE CRR L FGE+ CK +CD C L+ K + E ++Q
Sbjct: 834 YCENDVDCRRILQLLHFGEKFNSGNCKKTCDNCSQIKALVEKDVTETAKQLVQ 886
>gi|167751826|ref|ZP_02423953.1| hypothetical protein ALIPUT_00068 [Alistipes putredinis DSM 17216]
gi|167660067|gb|EDS04197.1| ATP-dependent DNA helicase RecQ [Alistipes putredinis DSM 17216]
Length = 730
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 184/308 (59%), Gaps = 18/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLY PE ++ L+K+ ++ AIDEAHCIS WGHDFRP YR++ + N +
Sbjct: 116 KLLYFAPESLTKEDNVAFLRKVK----VSFYAIDEAHCISEWGHDFRPEYRRIRPIINEI 171
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA PKVQ D+ ++L + + V KSSFNRPNL+YE+R K +D ++
Sbjct: 172 GTAPLIALTATATPKVQMDIQKNLGMSDASVFKSSFNRPNLYYEIRPKHDVD---REIIR 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K + I+YCL R +EL+ L A GI AYHAG++ + R++ DD++ R V
Sbjct: 229 YIKQHEGKSGIIYCLSRKKVEELTELLVANGIRALAYHAGMDAQTRAANQDDFLMERADV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD L +Y D +++E
Sbjct: 289 IVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGDGHCLTFYSYKDIQKLE 348
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q E+ K + + V Y E S CRRK +L FGE+ P C
Sbjct: 349 --------KFMQGKPVAEQEIGKLL--LLETVSYAESSMCRRKTLLHYFGEEYPEENC-G 397
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 398 CCDNCLHP 405
>gi|163756913|ref|ZP_02164021.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
gi|161323149|gb|EDP94490.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
Length = 732
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 183/310 (59%), Gaps = 23/310 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE ++ L+ + ++ +A+DEAHCIS WGHDFR
Sbjct: 104 QVKEDITNG--ITKLLYVAPESLTKEENVAFLRTVQ----ISFMAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L ++ + D +PI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLKNIIGKIGDNIPIIGLTATATPKVQEDILKNLGMTDANTFKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D AD+ +K N IVYCL R +EL+ L GI+ YHAGL+ K R
Sbjct: 218 PK--TKDVDADIIRFIKQNQGKSGIVYCLSRKRVEELAQVLQVNGINAVPYHAGLDPKKR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L +Y D ++E F + + +++ I ++V Y E S RRK
Sbjct: 336 CLAFYAYKDIEKLE------------KFMSGKPVAEQEIGHALLQEVVAYAETSISRRKF 383
Query: 303 ILESFGEQIP 312
IL FGE+ P
Sbjct: 384 ILHYFGEEFP 393
>gi|305664748|ref|YP_003861035.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
gi|88707870|gb|EAR00109.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
Length = 736
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 132/308 (42%), Positives = 183/308 (59%), Gaps = 23/308 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE ++ LK S G+ + VA+DEAHCIS WGHDFR
Sbjct: 109 QVKEDITNG--ITKLLYVAPESLTKEVYIEFLK---SAGI-SFVAVDEAHCISEWGHDFR 162
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L ++ L D +PI+ LTATA PKVQ+D++++L + + V K+SFNR NLFYEVR
Sbjct: 163 PEYRNLRTIVARLGDSIPIIGLTATATPKVQEDIIKNLGITDAKVFKASFNRANLFYEVR 222
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ D+ +K N IVYCL R +EL+ L G+S YHAG + K R
Sbjct: 223 TKTANVDS--DIIRFVKQNSGKSGIVYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTR 280
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 281 SKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 340
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L +Y D ++E F + + +++ I + ++V Y E S RRK
Sbjct: 341 CLAFYSYKDIEKLE------------KFMSGKPVAEQEIGNALLQEVVAYAETSMSRRKF 388
Query: 303 ILESFGEQ 310
+L FGE+
Sbjct: 389 MLHYFGEE 396
>gi|423270795|ref|ZP_17249766.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423274619|ref|ZP_17253565.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392698719|gb|EIY91901.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392704877|gb|EIY98011.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
Length = 601
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 181/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 104 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 159 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAIV 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 219 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 336 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|423298844|ref|ZP_17276869.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|408474193|gb|EKJ92712.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 601
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D++ L L P SSF+RPN+ V+ + +
Sbjct: 158 QFPQVPIIALTATADKITREDIIRQLHLIRPRTFISSFDRPNISLTVKRGFQAKEKNKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ +G I+YC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R
Sbjct: 218 IEFIQRHGKESGIIYCMSRSKTETVAQMLLKQGIRCGVYHAGLSAQQRDETQDDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K S++SQ K ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTKFASESSQ--------QKINLEKLQRMQQYAEADICRRRILLSYFGE-TATEDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|347965591|ref|XP_001238556.3| AGAP001255-PA [Anopheles gambiae str. PEST]
gi|333470440|gb|EAU75726.3| AGAP001255-PA [Anopheles gambiae str. PEST]
Length = 1523
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 196/341 (57%), Gaps = 15/341 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL S K +R LY+TPE T F ++ + + V +DEAHC+S WGHD
Sbjct: 272 RERVINDLKSVKTDIRFLYITPEQANTATFKDIMQHLVKFRKVAYVVVDEAHCVSEWGHD 331
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL +LR P VP +ALTATA+ +V +D+ +L L+ P+ K+ R NL+Y+
Sbjct: 332 FRPDYLKLGNLRAEYPSVPWIALTATASKQVVEDIFRNLRLKEPVAKFKTPCFRHNLYYD 391
Query: 123 VRYKDLLDDAYADLCSVL----------KANGDTCAIVYCLERTTCDELSAYLSAGGISC 172
V +K+ + D + L + K + C I+YC R + ++ L+ G+
Sbjct: 392 VVFKNSIQDDFLHLKDYIEGILGKQDEVKPSKRACGIIYCRTRENTERVATNLTKLGLRT 451
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
YHAGL R V +DW+ + + AT++FGMG+D+ VR V H++ P+++ A+YQE
Sbjct: 452 VPYHAGLKQSERDQVQEDWMEGKYVAIAATISFGMGVDKGSVRFVIHWDNPQNVAAYYQE 511
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD S +Y+ D + +EF+L ++ K+ + +E S+K+++ +F +MV++
Sbjct: 512 SGRAGRDGKKSFCRIYHCRDGCKSIEFLLRQDLQKSKD--TPKEESAKQAVKNFEKMVEF 569
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
CE + CR + + FG+ P C+N CD C +P + K +
Sbjct: 570 CESARCRHRLFTDYFGDDPPD--CRNMCDVCTNPKKVQKAI 608
>gi|197120051|ref|YP_002140478.1| ATP-dependent DNA helicase RecQ [Geobacter bemidjiensis Bem]
gi|197089411|gb|ACH40682.1| ATP-dependent DNA helicase RecQ [Geobacter bemidjiensis Bem]
Length = 599
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 189/321 (58%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ L +G+ L+LLYV PE + GF+ ++K++ ++L AIDEAHC+S WGHDFR
Sbjct: 98 RVLAQLHAGE--LKLLYVAPERLLSDGFLERIKQLP----ISLFAIDEAHCVSQWGHDFR 151
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y +L LR P++P++ALTATA + + D++ L LQ + F+RPN+ Y V
Sbjct: 152 PEYAQLGVLREIFPEIPMIALTATADAQTRGDILSRLGLQGATCYCAGFDRPNIRYSVID 211
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ ++ L L + D IVY L R +E++ L A GI AAYHAGL DK R
Sbjct: 212 KN---KPFSQLTGFLSSRKDEAGIVYALSRKRVEEVAKKLCAAGIKAAAYHAGLPDKERH 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V D ++ ++VVATVAFGMGID+ +VR V H+++PKS+E++YQE+GRAGRD LP+ +
Sbjct: 269 RVQDAFLKDDIKIVVATVAFGMGIDKSNVRFVVHYDMPKSIESYYQETGRAGRDGLPADA 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL +G D ++ + ++ + + M+ + E CRR+ +L
Sbjct: 329 LLLFGYGDVAVARGLIGNGGNAE---------QNRIELHKLNCMIGFAEAQTCRRRVLLG 379
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FG+++ C N CD C+ P
Sbjct: 380 YFGDRLEQD-CGN-CDICESP 398
>gi|452984131|gb|EME83888.1| hypothetical protein MYCFIDRAFT_134466 [Pseudocercospora fijiensis
CIRAD86]
Length = 485
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 196/355 (55%), Gaps = 29/355 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
KT+I DL SG P RLLYVTPE F + L+ ++ + L +A+DEAHCIS WGHD
Sbjct: 106 KTEILNDLKSGHPHTRLLYVTPEYCQLDHFRNHLRIVYQQQELARIAVDEAHCISEWGHD 165
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKS---SFNRPNLF 120
FRPS+++L+ + PD+P++ TATA V++DV+ +L L NP LK+ + +RPNL
Sbjct: 166 FRPSFKELNWFKKEFPDIPMICCTATATQAVREDVISTLAL-NPTKLKTFTMTTSRPNLH 224
Query: 121 YEVRYKDLLDDAYADLCSVLKA---------------------NGDTCAIVYCLERTTCD 159
YE+R+ D Y +L + ++A + + I+Y R +
Sbjct: 225 YEIRFTSDDQDRYDNLLAWIRATHARRANNPTRSQELKKRGERSTNVPGIIYTWYRKDTE 284
Query: 160 ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLV 217
L+ L A GI YHAGL+ + + L W+ +R+ ++VAT AFGMGID+ +VR V
Sbjct: 285 ALATRLQADGIGAKPYHAGLSVEQKDDHLTGWVKNREGYDIIVATTAFGMGIDKDNVRFV 344
Query: 218 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRER 277
H+ IPKS E +YQE+GRAGRD S +LYY +DR R ++ + K S + ++ +
Sbjct: 345 VHWQIPKSFEGYYQEAGRAGRDGKASMCILYYSREDRDRAANMMQREIQKLSNARNSNVK 404
Query: 278 SSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAK 331
++ ++ +CE S CR K I FGEQ C +CD K LAK
Sbjct: 405 ANYNRGKSLQALIGFCESVSKCRHKMIASYFGEQ-ETPPCDWACDWHKDSKGLAK 458
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+++ +++ LD+ P L+LLYVTPE+ + F++K+ ++ R L + IDEAHC+S
Sbjct: 1020 EMRRMVFQKLDAEHPEHELQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVS 1079
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + R P VP++ALTATA V DV +L +++ SFNRPN
Sbjct: 1080 QWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPN 1139
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGG-ISCAAYH 176
L+YEVR K+ + A + ++K D I+Y L R + + ++ L I YH
Sbjct: 1140 LYYEVRMKE--QNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1197
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + SV +W + + +VVVAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRA
Sbjct: 1198 ASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1257
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD PS LY+ D + + +++ + +Q ++ + +++V YCE
Sbjct: 1258 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQ--------KERQLQMLNRVVSYCESQ 1309
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR+++L FGE+ C++ CD C++
Sbjct: 1310 HTCRREEVLRYFGEEFDYRKCRDGCDNCRN 1339
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 193/330 (58%), Gaps = 16/330 (4%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+++ +++ LD+ P L+LLYVTPE+ + F++K+ ++ R L + IDEAHC+S
Sbjct: 1031 EMRRMVFQKLDAEHPEHELQLLYVTPEMVSKNQTFVNKMMDLYRRKKLARIVIDEAHCVS 1090
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + R P VP++ALTATA V DV +L +++ SFNRPN
Sbjct: 1091 QWGHDFRPDYKAIGEFRKRFPGVPVMALTATATQNVILDVKHNLAMEDCQTFSQSFNRPN 1150
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGG-ISCAAYH 176
L+YEVR K+ + A + ++K D I+Y L R + + ++ L I YH
Sbjct: 1151 LYYEVRMKE--QNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1208
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + SV +W + + +VVVAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRA
Sbjct: 1209 ASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1268
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD PS LY+ D + + +++ + +Q ++ + +++V YCE
Sbjct: 1269 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQ--------KERQLQMLNRVVSYCESQ 1320
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR+++L FGE+ C++ CD C++
Sbjct: 1321 HTCRREEVLRYFGEEFDYRKCRDGCDNCRN 1350
>gi|312373020|gb|EFR20851.1| hypothetical protein AND_18377 [Anopheles darlingi]
Length = 1482
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 197/341 (57%), Gaps = 15/341 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL + K +R LY+TPE T F ++ + + + +DEAHC+S WGHD
Sbjct: 247 RERVLNDLKAVKTDIRFLYITPEQAQTAIFKEIIQHLVKHRKVAYIVVDEAHCVSEWGHD 306
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV-LKSSFNRPNLFYE 122
FRP Y KL +LR+ P +P +ALTATA+ +V D+ ++L L+ P+ K+ R NL+Y+
Sbjct: 307 FRPDYLKLGALRSEYPSIPWIALTATASKQVVADIFKNLRLKEPVAKFKTQCFRHNLYYD 366
Query: 123 VRYKDLLDDAYADLCSVL----------KANGDTCAIVYCLERTTCDELSAYLSAGGISC 172
V +K+ + D Y L + K + C I+YC R T + ++ L+ G+
Sbjct: 367 VVFKNSIQDDYLHLKEYIESILGKQDEVKPSKRACGIIYCRTRETTERVAMSLTKLGLRT 426
Query: 173 AAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQE 232
YHAGL R +V +DW+ + + AT++FGMG+D+ VR V H++ P+++ A+YQE
Sbjct: 427 VPYHAGLKQSERETVQEDWMEGKYVAIAATISFGMGVDKGSVRFVVHWDNPQNVAAYYQE 486
Query: 233 SGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY 292
SGRAGRD S +Y+ D + ++F+L ++ K+ + +E ++K++I +F +M+++
Sbjct: 487 SGRAGRDGKKSYCRIYHCRDQCKSIDFLLKQDLQKSKD--TGKEAAAKQAIKNFEKMIEF 544
Query: 293 CEGSGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
CE CR + + FG+ P C+N CD C P + K L
Sbjct: 545 CETVRCRHRLFSDFFGDDPPE--CRNMCDVCASPKKVEKAL 583
>gi|297570067|ref|YP_003691411.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
gi|296925982|gb|ADH86792.1| ATP-dependent DNA helicase RecQ [Desulfurivibrio alkaliphilus AHT2]
Length = 609
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/309 (40%), Positives = 182/309 (58%), Gaps = 18/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE + F+ +L+++ + L AIDEAHC+S WGHDFRP Y +L LR
Sbjct: 108 LDLLYVAPERLMSEDFLGRLRELQ----IALFAIDEAHCVSQWGHDFRPEYIQLGRLRQK 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P +P++ALTATA P +KD++ L L+ +SF+RPN+ Y V K + L
Sbjct: 164 FPGIPLIALTATAEPHTRKDIIARLNLEKARCYLTSFDRPNIRYTVLEKK---RPFNQLL 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + I+YCL R ++L+A L G + A+YHAGL+ + RS V + ++
Sbjct: 221 DFLDGRREEAGIIYCLSRKRVEQLTAKLQEAGFAAASYHAGLSGEERSRVQEAFLRDDLP 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
++VATVAFGMGID+ ++R V H ++PK++E +YQE+GRAGRD L S++LL +GM D
Sbjct: 281 LIVATVAFGMGIDKSNIRYVVHHDVPKNIEGYYQETGRAGRDGLNSEALLLFGMGD---- 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
L++ NSQ+ R + K + MV + + +GCRR+ +L FGE + C
Sbjct: 337 -VALARGLIDNSQNEERRRIENHK----LAAMVGFAQATGCRRRVLLGYFGETLAAD-CG 390
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 391 N-CDTCLDP 398
>gi|163787884|ref|ZP_02182330.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
gi|159876204|gb|EDP70262.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
Length = 733
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 173/293 (59%), Gaps = 17/293 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL-RNY 77
+LLYV PE ++ L+ + ++ +A+DEAHCIS WGHDFRP YR L ++ +
Sbjct: 115 KLLYVAPESLTKEEYVEFLRTVK----ISFMAVDEAHCISEWGHDFRPEYRNLKTIIKRI 170
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
D+PI+ LTATA PKVQ+D+++SL + N + K+SFNRPNL+YEVR K + AD+
Sbjct: 171 GDDIPIVGLTATATPKVQEDILKSLGMPNAVTFKASFNRPNLYYEVRPK--TKNVDADII 228
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K N IVYCL R +EL+ L G+ YHAGL+ K R D ++
Sbjct: 229 RFVKQNDGKSGIVYCLSRKRVEELAQVLQVNGVKAVPYHAGLDAKTRVKHQDMFLMEDTD 288
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD L YY D ++
Sbjct: 289 VVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKL 348
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQ 310
E +S E+ ++ ++V + E S RRK IL FGE+
Sbjct: 349 EKFMSGK--------PVAEQEIGHAL--LQEVVAFAETSVSRRKFILHYFGEE 391
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 185/327 (56%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+K Y L P ++LLYVTPE + A+ +S L+ +++R LL IDEAHC+S WGHD
Sbjct: 715 SKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALENLYNRKLLARFVIDEAHCVSQWGHD 774
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD+ L + P V SFNR NL Y+V
Sbjct: 775 FRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDV 834
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +A L G++ AYHAGL D
Sbjct: 835 LPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 894
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 895 RDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEM 954
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 955 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVDCRRI 1007
Query: 302 KILESFGEQ-IPVSLCKNS----CDAC 323
++L FGE + CK+ CD C
Sbjct: 1008 QLLAYFGETDFNPNFCKDHPEVICDNC 1034
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 203/369 (55%), Gaps = 29/369 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L S K +LLY TPE A M L +H+R LL+ + IDEAHC+S WGH
Sbjct: 517 QQEILRELSSCK--YKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGH 574
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P+ P+LALTATA V++DV+++L L N ++ + SFNRPNL+Y
Sbjct: 575 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYS 634
Query: 123 V--RYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V + + LDD + ++ N D C I+YCL R C++++ L G A YH +
Sbjct: 635 VLPKTRKCLDD----IDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSM 690
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 691 DPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRD 750
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKS--------ISDFSQMVD 291
S +LYY D R++ ++++ + S S + RS+ S + +MV
Sbjct: 751 GQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVS 810
Query: 292 YCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC--------KHPNLLAKYLGELTSAVLQ 342
YCE CRR L FGE+ + CK +CD C K +AK L EL L
Sbjct: 811 YCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVK--LT 868
Query: 343 KNHFSQIFI 351
+ FS I
Sbjct: 869 REQFSSSHI 877
>gi|156085174|ref|XP_001610070.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
gi|154797322|gb|EDO06502.1| ATP-dependent DNA helicase, RecQ family protein [Babesia bovis]
Length = 832
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 189/323 (58%), Gaps = 16/323 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ED+ S +L+VTPE +T + + + + S+ L+ IDEAHC+S WG+DFR
Sbjct: 271 VFEDIRSRGEGSCVLFVTPERITTSKAVLQVFRNLESQNRLSRFVIDEAHCVSEWGNDFR 330
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ + ++ P+VP+ ALTATA P+V DV L L+ P VLKS+FNRPNL YEV
Sbjct: 331 PDYKAMGLFKHEFPNVPVCALTATATPQVVADVCAELRLKEPTVLKSNFNRPNLRYEVLP 390
Query: 126 KDL-LDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGIS--CAAYHAGLND 181
KD D + L ++ + C IVYCL +C+E+ A G S A YHA +N
Sbjct: 391 KDRNWDKSLTQLVQLINSRFKGLCGIVYCL---SCNEVERVTEALGTSMKVAPYHAQMNM 447
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+S D W+S V+VAT+AFGMGID+ DVR V HF+IPKS+E ++QE+GRAGRD
Sbjct: 448 ALRTSYYDQWMSGSVDVMVATLAFGMGIDKSDVRFVVHFSIPKSIENYFQEAGRAGRDGK 507
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCE-GSGCRR 300
PS +++Y D RR+ L+ + N +E S+ +I + YCE G CRR
Sbjct: 508 PSWCIIFYLFHDSRRL---LALSVLSNPTGPCQQEHVSRNNILS---VAGYCESGYACRR 561
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
K +L FGE + C CD C
Sbjct: 562 KALLSHFGETLQ-GRCDLPCDTC 583
>gi|313244395|emb|CBY15192.1| unnamed protein product [Oikopleura dioica]
Length = 601
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 185/336 (55%), Gaps = 43/336 (12%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I +DL SG P R+LYVTPE T F+ + ++SR L++LVAIDEAHC+S WGHDFRP
Sbjct: 186 IMDDLYSGVPKTRILYVTPEQVQTQRFIKLARWMNSRCLIHLVAIDEAHCVSQWGHDFRP 245
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y KL LR +P+ +A TATA KV++DV R NL+Y+V+ K
Sbjct: 246 DYLKLGLLREIIPNARFVACTATATKKVEEDVW--------------ITRENLYYDVKMK 291
Query: 127 DLLDDAYADLCSVLK---------ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHA 177
D+L + + L + + + + IVYC R C+E++ L+ G+ YHA
Sbjct: 292 DILPNPHKHLANFARECIGKQRPDGSYEGAGIVYCFRRDDCEEMAVSLTRLGVEAEPYHA 351
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL + R+ V +DW R V+ AT++FGMG+D+++VR V H+ +PKS+ + QESGRAG
Sbjct: 352 GLKPETRTRVQEDWTEGRVPVICATISFGMGVDKENVRFVAHWTLPKSLAGYLQESGRAG 411
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG 297
RD PSK LYY ++++ Q+K R+ F + YCE +
Sbjct: 412 RDNKPSKCRLYYSREEQQ---------QNKKKVMIQLRQ---------FESVTKYCEATD 453
Query: 298 CRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
CR + + + FGE CK +CD C + +A+ L
Sbjct: 454 CRHRTMAKFFGEN--TDDCKTNCDGCTNKVQVAREL 487
>gi|91775306|ref|YP_545062.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91775450|ref|YP_545206.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709293|gb|ABE49221.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|91709437|gb|ABE49365.1| ATP-dependent DNA helicase RecQ [Methylobacillus flagellatus KT]
gi|167042457|gb|ABZ07183.1| putative DEAD/DEAH box helicase [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 611
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 187/321 (58%), Gaps = 16/321 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+Y+ L G+ L++LYV PE TP F+S L I R + L AIDEAHC+S WGHDFRP
Sbjct: 101 VYQALMRGE--LKVLYVAPERLMTPSFLSTLHDIQQRFGIALFAIDEAHCVSQWGHDFRP 158
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR+L+ L P+VP +ALTATA + +++E L L++ SSF+RPN+ Y V K
Sbjct: 159 EYRQLTVLHEEFPEVPRIALTATADTPTRNEIVERLGLEHARQFISSFDRPNIRYRVALK 218
Query: 127 DLLDDAYADLCSVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
++A L L++ + + I+YCL R +E +A+L G YHAGL+ R
Sbjct: 219 ---NNARKQLLGFLESEHPNDAGIIYCLSRRKVEETAAWLKEQGWDALPYHAGLDATVRQ 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ ++ ++VATVAFGMGID+ +VR V H ++PKSME +YQE+GRAGRD L + +
Sbjct: 276 ANQQRFLREEGIIMVATVAFGMGIDKPNVRFVVHLDLPKSMEGYYQETGRAGRDGLDADA 335
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ YG+ D M +L S + R+R ++ + ++ +CE + CR + IL
Sbjct: 336 WMVYGLGDVVNMRQLLD-----GSDTPEERKRLERQKL---DALLGFCESTACRHQAILR 387
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGEQ P + C CD C P
Sbjct: 388 YFGEQHPGN-C-GQCDNCLSP 406
>gi|443695320|gb|ELT96261.1| hypothetical protein CAPTEDRAFT_131881 [Capitella teleta]
Length = 570
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 187/324 (57%), Gaps = 23/324 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ++ S K LRLLYVTPE L + FMS L+K++++ L AIDE HC S WGHDFR
Sbjct: 177 VHSEMTSTKSDLRLLYVTPEKLAKSKRFMSYLEKMYTQNRLARFAIDEVHCCSQWGHDFR 236
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P PIL LTATA V DV + L + + ++LK+SFNR NLFYEVR
Sbjct: 237 PDYKFLGILKRQFPKAPILGLTATATSSVLNDVKKILQIPDCVILKASFNRANLFYEVRP 296
Query: 126 KDLLDDAYA---DLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
K +A+A ++ +++ D IVYCL + +E++ L + G++ A YHA ++
Sbjct: 297 KP--SNAHALVEEIVDLIQTRFRDQSGIVYCLTQKDSEEMARQLQSHGLTAACYHAQMDA 354
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K RS W +++ QVVVAT+AFGMGID+ +VR V H I KSME +YQESGRAGRD
Sbjct: 355 KHRSLAHRKWTTNKIQVVVATIAFGMGIDKPNVRFVIHHTISKSMENYYQESGRAGRDDQ 414
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRR 300
+ +++ G D R ++ Q+ + +S M+DY S CRR
Sbjct: 415 TAHCIVFRGFADLFRQSTMVFSEQTGQEKLYS---------------MLDYVNDLSTCRR 459
Query: 301 KKILESFGEQIPVSLCKNSCDACK 324
I FGE S C+ CD C+
Sbjct: 460 ALIARHFGETWKSSDCQEKCDNCQ 483
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 192/328 (58%), Gaps = 10/328 (3%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I + L+ RLLYVTPE A + + L+ +H R LL + IDEAHC+S WGH
Sbjct: 115 QRQILQQLNFDHCEYRLLYVTPEKIARSDNLLRNLENLHRRRLLARIVIDEAHCVSQWGH 174
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ DVP++ALTATA +V++DV+++L L ++ + +FNRPNL Y
Sbjct: 175 DFRPDYQNLGILKQKFSDVPLMALTATATMRVKEDVVQALGLCKCIIFRQTFNRPNLRYS 234
Query: 123 VRYKDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K Y ++ + +K N I+YC + C+ + L G YHA ++
Sbjct: 235 VVPK--TKKVYEEIDAFIKENYPRESGIIYCFSKMDCERVCEQLRKTGHKIGFYHASMDP 292
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ V W ++ ATVAFGMGI++ DVR V H +IPKS+E ++QESGRAGRD L
Sbjct: 293 QERNRVQRMWSKDEINIICATVAFGMGINKPDVRFVIHHSIPKSIEGYHQESGRAGRDNL 352
Query: 242 PSKSLLYYGMDDRRRMEFILSK---NQSKNSQSFSTRERSS--KKSISDFSQMVDYCEGS 296
P+ +LYY D R++ +LS+ +Q+ +S++ + ++ K + + +M YCE
Sbjct: 353 PASCILYYSYSDYVRVKHLLSQGAVDQTSTGRSWNNSDTANQMKTNFDNLQRMGAYCENE 412
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC 323
CRR L FGE+ + CK++CD C
Sbjct: 413 VDCRRSLQLGHFGEKFDSASCKSTCDNC 440
>gi|146298045|ref|YP_001192636.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146152463|gb|ABQ03317.1| ATP-dependent DNA helicase, RecQ family [Flavobacterium johnsoniae
UW101]
Length = 731
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 180/306 (58%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE +++ L+ + ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKKDISSGLT--KLLYVAPESLTKEEYVAFLQSVP----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L VPI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLRTIIKQLGKVPIIGLTATATPKVQEDILKNLDMSDANTFKASFNRPNLYYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K +D+ +K + I+YCL R + ++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKSIESDIIRFIKQHKGKSGIIYCLSRKKVESIAEVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFMSGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFLL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|345888669|ref|ZP_08839734.1| ATP-dependent DNA helicase RecQ [Bilophila sp. 4_1_30]
gi|345040450|gb|EGW44706.1| ATP-dependent DNA helicase RecQ [Bilophila sp. 4_1_30]
Length = 610
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 180/317 (56%), Gaps = 19/317 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ E L SG+ L LLY++PE + PGF L ++ A+DEAHCIS WGHDFRP
Sbjct: 108 VREALASGE--LDLLYISPERLSAPGFWEALASWP----VSFFAVDEAHCISQWGHDFRP 161
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y LS L P P+ A TATA P+V++D++ L L+ P ++++SF+RPNLFY V K
Sbjct: 162 DYLALSGLVERFPQCPVAAFTATATPEVERDILFRLGLREPRLIRASFDRPNLFYHVLPK 221
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
+ + +A L S L + IVY R +E +A+L G+ AYHAGL D R
Sbjct: 222 E---EPHAQLLSFLGGHAGESGIVYRSTRRKVEETAAFLQKKGVKAEAYHAGLPDAERMR 278
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
V + + VVVATVAFGMGID+ DVR V H ++PK++E +YQE+GRAGRD P+ L
Sbjct: 279 VQEAFRRDECPVVVATVAFGMGIDKPDVRFVAHLDLPKNVEGYYQETGRAGRDGDPAHCL 338
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
L Y D ++ + + + + +S + + + M++Y E + CRRK +L
Sbjct: 339 LLYSAADMAQLLYFARQTEDEEQRSIAEKHAYA---------MLEYAERNQCRRKALLSY 389
Query: 307 FGEQIPVSLCKNSCDAC 323
FGE C CD C
Sbjct: 390 FGEAFEEPNC-GGCDVC 405
>gi|329113513|ref|ZP_08242294.1| ATP-dependent DNA helicase RecQ [Acetobacter pomorum DM001]
gi|326697338|gb|EGE48998.1| ATP-dependent DNA helicase RecQ [Acetobacter pomorum DM001]
Length = 641
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/323 (41%), Positives = 191/323 (59%), Gaps = 19/323 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
KI DL +G+ + LLY++PE + G + +L +I L+++AIDEAHCIS+WGH+FR
Sbjct: 136 KIRSDLANGR--IDLLYISPERLLSSGTLDRLVRIP----LSVIAIDEAHCISAWGHEFR 189
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L++L + P VP +ALTATA + ++D++ +L + + VL SSF+RPNL V+
Sbjct: 190 PEYRALTALPRHFPHVPRIALTATADERTREDILTALDMPHAEVLVSSFHRPNLNISVQP 249
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K L + L+ + D +IVYC R + ++A L G AYHAGL+ +
Sbjct: 250 KA---SETRQLITALERHKDAASIVYCGSRARTERMAASLRERGWPALAYHAGLSPIEKR 306
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
+ L + S V+VATVAFGMGIDR DVR V H ++P S EA+YQ+ GRAGRD LPS +
Sbjct: 307 AALLRFRSGEPLVIVATVAFGMGIDRPDVRAVVHLDMPSSPEAYYQQIGRAGRDGLPSDT 366
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL YG +D R + L ++ + S+ R R M+ E +GCR + +L
Sbjct: 367 LLLYGGEDMARARYWLDQSAAPESEKRIMRSR--------LEAMIALTETTGCRTRALLH 418
Query: 306 SFGEQIPVSLCKNSCDACKHPNL 328
FGE++ C + CD C HP L
Sbjct: 419 CFGEEL-AEPCGH-CDNCLHPVL 439
>gi|302767148|ref|XP_002966994.1| hypothetical protein SELMODRAFT_408296 [Selaginella moellendorffii]
gi|300164985|gb|EFJ31593.1| hypothetical protein SELMODRAFT_408296 [Selaginella moellendorffii]
Length = 901
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 194/323 (60%), Gaps = 24/323 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
K ED +G+ +LY+TPE + S L SRG+ +L+A+DEAHCIS WGHDFR
Sbjct: 90 KTVED-KAGRGEYDILYMTPEKACGTTWTSLL----SRGV-SLLAVDEAHCISEWGHDFR 143
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++LSS+R+ LP+VP +ALTATA KV++D+++SL L+N + SSF+R N+FY V
Sbjct: 144 PEYQRLSSIRSKLPEVPFVALTATATHKVREDILKSLMLKNAYIAVSSFDRSNIFYGVKP 203
Query: 124 --RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
R ++ ++ L+ G T IVYC DE++ L G + AYH+ L
Sbjct: 204 LTRSNAFREELATEVVKDLEQGGST--IVYCNTIKDVDEVTNALVKAGAAARAYHSKLGL 261
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ V ++ QVVVATVAFGMGID+ D+R V H+ PKS+E++YQESGR GRD L
Sbjct: 262 KERNDVHRTFLKDELQVVVATVAFGMGIDKPDIRRVIHYGCPKSLESYYQESGRCGRDGL 321
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGSGCRR 300
PS LY+ D R E+ S+ T+ER KK+++D F+ YC + CRR
Sbjct: 322 PSACWLYFTRADFTRAEYYTSE--------VRTQER--KKAVADAFAASQGYCTTTTCRR 371
Query: 301 KKILESFGEQIPVSLCKNSCDAC 323
K IL+ FGE C N CD C
Sbjct: 372 KFILQYFGEFTKNDNCGN-CDNC 393
>gi|395801803|ref|ZP_10481058.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395435992|gb|EJG01931.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 731
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 181/306 (59%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+ SG +LLYV PE +++ L+ + ++ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKKDITSGLT--KLLYVAPESLTKEEYVAFLQSVP----ISFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L VPI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLRNIIKQLGKVPIIGLTATATPKVQEDILKNLDMADANTFKASFNRPNLYYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K + I+YCL R + ++ L GIS YHAGL+ K R+
Sbjct: 218 K--TKNIESDIIRFIKQHKGKSGIIYCLSRKKVESIAEVLQVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 KHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFMSGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFLL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|322421607|ref|YP_004200830.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
gi|320127994|gb|ADW15554.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M18]
Length = 598
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 190/321 (59%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +L +G+ L+LLYV PE + GF+ ++K + ++L AIDEAHC+S WGHDFR
Sbjct: 98 RVLAELHAGE--LKLLYVAPERLLSDGFLERIKTLP----ISLFAIDEAHCVSQWGHDFR 151
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y +L LR P +P++ALTATA + + D++ L L++ + F+RPN+ Y V
Sbjct: 152 PEYAQLGVLREIFPQIPMIALTATADAQTKGDILSRLGLEDAACFFAGFDRPNIRYGVME 211
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ + L + L D IVY L R +E++ L GI AAYHAGL DK R
Sbjct: 212 KN---KPFNQLTAFLATRKDEAGIVYALSRKRVEEVARKLCGAGIKAAAYHAGLPDKERH 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V + ++ ++VVATVAFGMGID+ +VR V H+++PKS+E++YQE+GRAGRD LP+ +
Sbjct: 269 QVQEAFLRDDVKIVVATVAFGMGIDKSNVRFVVHYDMPKSIESYYQETGRAGRDGLPADA 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL +G D +++ N + E ++ + + MV + E CRR+ +L
Sbjct: 329 LLLFGYGD-----IAVARGLIGNGGN----EEQNRIELHKLNCMVGFAEAQTCRRRVLLG 379
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FG+++ C N CD C+ P
Sbjct: 380 YFGDRLEEG-CGN-CDICESP 398
>gi|341889852|gb|EGT45787.1| hypothetical protein CAEBREN_01169 [Caenorhabditis brenneri]
Length = 831
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 196/361 (54%), Gaps = 37/361 (10%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
Q +++I+ +L KP++R+LY+T E AT G L + R +L + +DEAHC++ WG
Sbjct: 260 QERSRIWAELGRDKPTIRMLYITAEGCATEGIKKLLGGLTKREVLRYIVVDEAHCVTQWG 319
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP Y L SLR+ P VP +ALTATA K Q D+ L L+NP K+ R NLFY
Sbjct: 320 HDFRPDYLTLGSLRDVCPGVPWVALTATANAKAQDDIAFQLKLRNPESFKAGTYRDNLFY 379
Query: 122 EVRYKDLLDDA-------YADLCSVL--KANGDT--------------------CAIVYC 152
+V +D L A + + C + K NG + AIVYC
Sbjct: 380 DVCMRDHLPTAPENHMASFINKCLTIDAKTNGISSNQTKNEKSGRANHKRTFTGSAIVYC 439
Query: 153 LERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRK 212
R C++++ L GI AYHAGL K R+ V + W+++ VV ATVAFGMGID+
Sbjct: 440 RSRNECEQVAKMLVIAGIPAEAYHAGLGKKDRNDVQEKWMNNEIPVVAATVAFGMGIDKP 499
Query: 213 DVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILS------KNQS 266
DVR V H++ +++ +YQE+GRAGRD S +YY D+ + F++S + ++
Sbjct: 500 DVRAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLVSGELAKLREKA 559
Query: 267 KNSQSFSTRERSSKKSI-SDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCDACKH 325
K + + + KSI + +M+DYCE + CR I SF + CK +CD C+
Sbjct: 560 KKNNADGEKAAMQIKSIQTGLQKMLDYCESAKCRHVSIA-SFFDDTDCQPCKTNCDFCRD 618
Query: 326 P 326
P
Sbjct: 619 P 619
>gi|317484346|ref|ZP_07943267.1| ATP-dependent DNA helicase RecQ [Bilophila wadsworthia 3_1_6]
gi|316924424|gb|EFV45589.1| ATP-dependent DNA helicase RecQ [Bilophila wadsworthia 3_1_6]
Length = 617
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 128/317 (40%), Positives = 180/317 (56%), Gaps = 19/317 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ E L SG+ L LLY++PE + PGF L ++ A+DEAHCIS WGHDFRP
Sbjct: 115 VREALASGE--LDLLYISPERLSAPGFWDALASWP----VSFFAVDEAHCISQWGHDFRP 168
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y LS L P P+ A TATA P+V++D++ L L+ P ++++SF+RPNLFY V K
Sbjct: 169 DYLALSGLVERFPQCPVAAFTATATPEVERDILSRLGLREPRLIRASFDRPNLFYHVLPK 228
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
+ + +A L S L + IVY R +E +A+L G+ AYHAGL D R
Sbjct: 229 E---EPHAQLLSFLGGHEGESGIVYRSTRRKVEETAAFLQKKGVKAEAYHAGLPDAERMR 285
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
V + + VVVATVAFGMGID+ DVR V H ++PK++E +YQE+GRAGRD P+ L
Sbjct: 286 VQEAFRRDECPVVVATVAFGMGIDKPDVRFVAHLDLPKNVEGYYQETGRAGRDGDPAHCL 345
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
L Y D ++ + + + + +S + + + M++Y E + CRRK +L
Sbjct: 346 LLYSAADMAQLLYFARQTEDEEQRSIAEKHAYA---------MLEYAERNQCRRKALLSY 396
Query: 307 FGEQIPVSLCKNSCDAC 323
FGE C CD C
Sbjct: 397 FGEDFEEPNC-GGCDVC 412
>gi|443244229|ref|YP_007377454.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442801628|gb|AGC77433.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 730
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 181/306 (59%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +D+++G +LLYV PE ++ LK+ ++ +A+DEAHCIS WGHDFR
Sbjct: 104 QVKDDIENG--ITKLLYVAPESLTKEEYVDFLKQQK----ISFLAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L + + + D+PI+ LTATA PKVQ+D++++L + + ++SFNRPNLFYEVR
Sbjct: 158 PEYRNLRKIIDRIGSDIPIIGLTATATPKVQEDILKNLQITDATTFQASFNRPNLFYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K DA D+ +K N IVYCL R +EL+ L GI YHAGL+ K R
Sbjct: 218 PKTANVDA--DITRFIKQNEGKSGIVYCLSRKRVEELAQVLQVNGIKAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 VKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E +S + + +E + +MV Y E S RR+ IL
Sbjct: 336 CLAYYSYKDIEKLEKFMS------GKPIAEQEIGH----ALLQEMVGYSETSMSRRQYIL 385
Query: 305 ESFGEQ 310
FGE+
Sbjct: 386 HYFGEE 391
>gi|386820490|ref|ZP_10107706.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386425596|gb|EIJ39426.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 733
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 127/306 (41%), Positives = 180/306 (58%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE ++ + + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 QVKEDITNG--VTKLLYVAPESLTKEEYVEFFRTVK----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L D+PI+ALTATA PKVQ+D++++L + + V K+SFNRPNL+YEVR
Sbjct: 158 PEYRNIRTIIQRLGDDIPIIALTATATPKVQEDILKNLGVNSAEVYKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R +EL+ L G+ YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNEGKSGIIYCLSRKRVEELAQTLQVNGLKAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ +VVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 ARHQDMFLMEDTDIVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E +S E+ ++ MV Y E S RRK IL
Sbjct: 336 CLAFYSYKDIEKLEKFMSGK--------PVAEQEVGHAL--LQDMVAYAETSMSRRKYIL 385
Query: 305 ESFGEQ 310
FGE+
Sbjct: 386 HYFGEE 391
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 203/369 (55%), Gaps = 29/369 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L S K +LLY TPE A M L +H+R LL+ + IDEAHC+S WGH
Sbjct: 506 QQEILRELSSCK--YKLLYATPEKVAKSDVLMRNLDNLHARELLSRIVIDEAHCVSQWGH 563
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P+ P+LALTATA V++DV+++L L N ++ + SFNRPNL+Y
Sbjct: 564 DFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYS 623
Query: 123 V--RYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
V + + LDD + ++ N D C I+YCL R C++++ L G A YH +
Sbjct: 624 VLPKTRKCLDD----IDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSM 679
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
+ R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 680 DPARRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRD 739
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKS--------ISDFSQMVD 291
S +LYY D R++ ++++ + S S + RS+ S + +MV
Sbjct: 740 GQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVS 799
Query: 292 YCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC--------KHPNLLAKYLGELTSAVLQ 342
YCE CRR L FGE+ + CK +CD C K +AK L EL L
Sbjct: 800 YCENDVDCRRLLQLVHFGEKFDSAHCKKTCDNCLKIKSFVEKDVTEIAKQLVELVK--LT 857
Query: 343 KNHFSQIFI 351
+ FS I
Sbjct: 858 REQFSSSHI 866
>gi|440227317|ref|YP_007334408.1| ATP-dependent DNA helicase RecQ [Rhizobium tropici CIAT 899]
gi|440038828|gb|AGB71862.1| ATP-dependent DNA helicase RecQ [Rhizobium tropici CIAT 899]
Length = 626
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 135/323 (41%), Positives = 180/323 (55%), Gaps = 25/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+Y + +GK L LLYVTPE AT GF L R + L AIDEAHC+S WGHDFRP
Sbjct: 121 VYRAISAGK--LDLLYVTPERIATEGFCQML----GRAKIALFAIDEAHCVSQWGHDFRP 174
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L L P VP +ALTATA P + D++E L L + V +SF+RPN+ YE+ +
Sbjct: 175 EYRDLGRLAELFPGVPRIALTATADPHTRDDIIERLALDDAKVFTTSFDRPNITYEIVER 234
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D L L+ + IVYCL R ++ + +L+ GI YHAG++ R +
Sbjct: 235 D---QPRQQLLRFLEGHRGDSGIVYCLSRAKVEDTAEWLNGQGIRALPYHAGMDRALRDA 291
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ +VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS
Sbjct: 292 NQDAFLKEEDLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSNVW 351
Query: 247 LYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ YGM D R RM ++ S+ ER+ + ++ CE +GCRR+ I
Sbjct: 352 MAYGMADVIQRGRM-----IDEGGASEEIKRVERAK------LNALLAICETAGCRRQSI 400
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C N CD C P
Sbjct: 401 LSHFGEAHGGG-CGN-CDTCLKP 421
>gi|313148719|ref|ZP_07810912.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313137486|gb|EFR54846.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 607
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 184/314 (58%), Gaps = 21/314 (6%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLS 72
SGK L+LLY++PE +S+ + ++L A+DEAHCIS WGHDFRP Y ++
Sbjct: 107 SGK--LKLLYISPE-----KLLSEADYLLRDMTISLFAVDEAHCISQWGHDFRPEYARMG 159
Query: 73 SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDA 132
LR P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ +
Sbjct: 160 FLRTQFPNVPMIALTATADKITREDIVRQLQLKQPEIFISSFDRPNLSLSVKRGYQPKEK 219
Query: 133 YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
+ + + D I+YC+ R+ + ++ L GI C YHAGL+ + R DD+I
Sbjct: 220 SKAIVDFIARHRDESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFI 279
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
+ R +VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y +
Sbjct: 280 NDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLG 339
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D +L+K F+T ++ ++M Y E CRR+ +L FGE
Sbjct: 340 DL----ILLTK--------FATESNQQNINLEKLNRMQQYAEADICRRRILLSYFGE-TA 386
Query: 313 VSLCKNSCDACKHP 326
C N CD C++P
Sbjct: 387 TEDCGN-CDVCRNP 399
>gi|146300558|ref|YP_001195149.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146154976|gb|ABQ05830.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
Length = 705
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 184/310 (59%), Gaps = 23/310 (7%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ +L+Y+ PE +S L I S ++L+AIDEAHCISSWGHDFRP+Y L L+N
Sbjct: 108 TFKLVYIAPES------LSYLDTIFSELTISLIAIDEAHCISSWGHDFRPAYTNLGYLKN 161
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P P+LALTATA + D+ + L L+NP +SF+R NL EVR D +
Sbjct: 162 RFPSTPVLALTATADKATRVDITKQLNLKNPKTFVASFDRKNLSLEVRPAL---DRVKQI 218
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ + I+YCL R T +EL+ L+ GI+ AYHAGL++ R+ D++I+
Sbjct: 219 IDFVENKPNESGIIYCLSRKTTEELAEKLAKNGIAAKAYHAGLDNTTRAKTQDEFINDDC 278
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PK++E +YQE GRAGRD LP++++L+ D +
Sbjct: 279 QVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLPAETVLFESYADVIQ 338
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ Q F++ ++ ++ +M Y + CRRK +L FGE + + C
Sbjct: 339 L------------QKFASDGLNADVQLAKLDRMKQYADAVSCRRKILLSYFGELVTEN-C 385
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 386 GN-CDICKNP 394
>gi|392396238|ref|YP_006432839.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
gi|390527316|gb|AFM03046.1| ATP-dependent DNA helicase RecQ [Flexibacter litoralis DSM 6794]
Length = 725
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 190/328 (57%), Gaps = 27/328 (8%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
M + +I ++ GK ++LLYV+PE T F L+ + ++L A+DEAHCIS W
Sbjct: 94 MAEQREIESEVKQGK--IKLLYVSPEKLLTESFTYFLQSLS----ISLFAVDEAHCISQW 147
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y +L SL++ P VP++ALTATA ++D++ L L+NP +SFNRPNL
Sbjct: 148 GHDFRPEYTQLKSLKDRFPFVPMIALTATADKITRRDIISQLGLENPTEFVASFNRPNLS 207
Query: 121 YEV--RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
V YK + + S + + I+YCL R + ++A L G+ YHAG
Sbjct: 208 LNVLPAYKRM-----DSIVSYILRRPNESGIIYCLSRKNTENVAARLQKAGMKADYYHAG 262
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
LN RS V DD+I+ R ++ ATVAFGMGID+ +VR V H+NIPK++E +YQE GRAGR
Sbjct: 263 LNAHERSRVQDDFITDRTPIICATVAFGMGIDKPNVRWVMHYNIPKNIEGYYQEIGRAGR 322
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D L ++L+Y +D +E + + F+ + + ++ +M Y + C
Sbjct: 323 DGLKGDTMLFYSFND---LEVL---------KGFAEQSGQKELQLAKLDRMQQYADAKIC 370
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHP 326
RRK +L FGE + + C N CD CK+P
Sbjct: 371 RRKILLSYFGETL-LENCGN-CDVCKNP 396
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 197/348 (56%), Gaps = 17/348 (4%)
Query: 2 QVKTKIYEDLDSGKPSL--RLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCIS 58
Q + +I+ P L +LLYVTPE L + FM L ++S L + IDEAHC+S
Sbjct: 794 QKRNQIFSSFKERSPELYIQLLYVTPEMLNNSQNFMRALTNLYSNKRLARIVIDEAHCVS 853
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ L LR+ P VPI+ALTATA V D+ +L + + V SFNRPN
Sbjct: 854 QWGHDFRPDYKALGKLRHQFPTVPIIALTATATQNVIVDIKHNLGMDSCQVFSQSFNRPN 913
Query: 119 LFYEVRYKDL-LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYH 176
L YEVR K+ L ADL + K NG C I+Y L R T ++++ L S I + YH
Sbjct: 914 LTYEVRRKEKELIHKIADLI-MSKYNGQ-CGIIYTLSRKTSEQVAEKLRSQYNIKASHYH 971
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + R V +W + + VVVAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRA
Sbjct: 972 AQMTPEDRIRVQREWQADKIHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRA 1031
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG- 295
GRD PS +L++G D ++ +++ + +Q R+R +++ +C+
Sbjct: 1032 GRDGNPSDCILFFGYQDVATLKKMIADGEGSETQ--KERQRIM------LNRVTAFCDNR 1083
Query: 296 SGCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKY-LGELTSAVLQ 342
CRR +IL FGE C+ +CD C+ + + EL A +Q
Sbjct: 1084 ENCRRVEILRYFGEVFNADDCEKTCDNCRAGAVFEQQDFSELAQAAIQ 1131
>gi|372209002|ref|ZP_09496804.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium S85]
Length = 734
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/293 (42%), Positives = 172/293 (58%), Gaps = 18/293 (6%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ LKK ++ AIDEAHCIS WGHDFRP YR L + +
Sbjct: 115 KLLYVAPESLTKDEYVDFLKKQK----ISFFAIDEAHCISEWGHDFRPEYRNLRRIITRI 170
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
DVPI+ LTATA PKVQ+D++++L + N K+SFNRPNLFYEVR K D +D+
Sbjct: 171 GDVPIIGLTATATPKVQEDIIKTLGMTNANTFKASFNRPNLFYEVRPK--TKDVTSDIIR 228
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
++ ++YCL R +E++ L GIS YHAGL+ K R+ D ++ V
Sbjct: 229 FIRQRLGKSGVIYCLSRKKVEEIAQTLQVNGISALPYHAGLDAKTRAKHQDMFLMEDVDV 288
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD L +Y D ++E
Sbjct: 289 IVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYSYKDIEKLE 348
Query: 259 -FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQ 310
F+ +K S+ + ++V Y E S RR+ +L FGE+
Sbjct: 349 KFMANKPVSEQELGHAL-----------LQEVVGYAETSMSRRRYLLHYFGEE 390
>gi|260909474|ref|ZP_05916178.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636399|gb|EEX54385.1| ATP-dependent helicase RecQ [Prevotella sp. oral taxon 472 str.
F0295]
Length = 725
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 129/317 (40%), Positives = 177/317 (55%), Gaps = 21/317 (6%)
Query: 12 DSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
D + + +LLYV PE + L+ I ++ A+DEAHCIS WGHDFRP YR +
Sbjct: 107 DVKRGATKLLYVAPESLGKDENVEFLQSIK----VSFYAVDEAHCISEWGHDFRPEYRNI 162
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
+ + P++ALTATA KV+ D+ ++L + L KSSFNRPNL+YEVR K +
Sbjct: 163 RPTISRIGQAPVIALTATATDKVRSDIKKNLGIGEALEFKSSFNRPNLYYEVRSK--TQE 220
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
++ +K + I+YCL R +ELSA L A I YHAGL+ RS DD+
Sbjct: 221 VDRNIIMFIKQHAGKSGIIYCLSRKKVEELSAILKANNIKAEPYHAGLDSATRSQTQDDF 280
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
+ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + +Y
Sbjct: 281 LMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCITFYSN 340
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESFGE 309
D +++E F + S++ I + Y E S CRRK +L FGE
Sbjct: 341 KDLQKLE------------KFMEGKPVSEQDIGRQLLLETAAYAESSVCRRKMLLHYFGE 388
Query: 310 QIPVSLCKNSCDACKHP 326
+ C N CD C HP
Sbjct: 389 EYTEDNCHN-CDNCLHP 404
>gi|183600296|ref|ZP_02961789.1| hypothetical protein PROSTU_03856 [Providencia stuartii ATCC 25827]
gi|188020087|gb|EDU58127.1| ATP-dependent DNA helicase RecQ [Providencia stuartii ATCC 25827]
Length = 608
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 188/314 (59%), Gaps = 26/314 (8%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LLYV PE T F+S+L + ++L+A+DEAHC+S WGHDFRP YR + LR
Sbjct: 115 AIKLLYVAPERLLTDYFLSQLSSWN----ISLLAVDEAHCVSQWGHDFRPEYRAIGQLRQ 170
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYA 134
+ PDVPI+ALTATA + D++ L L +PL+ SSF+RPN+ Y + +YK L
Sbjct: 171 HFPDVPIMALTATADETTRADIVRLLALHDPLIQISSFDRPNIRYTLVEKYKPL-----D 225
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L +KA IVYC R+ +E + L G+S AAYHAGL+++ R V D ++
Sbjct: 226 QLWFFIKAQKGKAGIVYCNSRSKVEETAERLQKRGLSVAAYHAGLDNQQREWVQDAFLKD 285
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
Q+VVATVAFGMGI++ +VR V HF+IP+++EA+YQE+GRAGRD + ++++L+Y D
Sbjct: 286 NLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADM 345
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE--QIP 312
+ L + + Q ER +I+ F+ E CRR +L FGE Q P
Sbjct: 346 AWLRRCLEEKPAGLQQDI---ERHKLNAIAAFA------EAQTCRRLVLLNYFGENRQAP 396
Query: 313 VSLCKNSCDACKHP 326
C N CD C P
Sbjct: 397 ---CGN-CDICLDP 406
>gi|302878781|ref|YP_003847345.1| ATP-dependent DNA helicase RecQ [Gallionella capsiferriformans
ES-2]
gi|302581570|gb|ADL55581.1| ATP-dependent DNA helicase RecQ [Gallionella capsiferriformans
ES-2]
Length = 610
Score = 240 bits (612), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 180/312 (57%), Gaps = 12/312 (3%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
+ L LLYV PE F+ L+++ +R L L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 105 RGELDLLYVAPERLMNANFLGLLEQVQTRHGLALFAIDEAHCVSQWGHDFRPEYRELTIL 164
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R+ P VP +ALTATA +++++E L L+ SSF+RPN+ Y++ KD + +
Sbjct: 165 RDRFPAVPRIALTATADAPTRREIVERLSLEQAREFVSSFDRPNIRYKITNKDSVINQLQ 224
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ K + D IVYCL R DE +A L A G YHAGL+ R++ ++
Sbjct: 225 YFIN--KEHPDEAGIVYCLSRRRVDETAAKLKALGWDALPYHAGLDAATRAANQSRFLRE 282
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
++VATVAFGMGID+ +VR V H ++PKSME +YQE+GRAGRD LP+ + + YG+ D
Sbjct: 283 EGVIMVATVAFGMGIDKPNVRFVAHIDLPKSMEGYYQETGRAGRDGLPADAWMAYGLGDV 342
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
M +L + E + + ++ +CE + CR + +L FGE P +
Sbjct: 343 VSMRQMLLSGDAP--------EERKRVELQKLDALLGFCESTACRHQTLLRYFGESHPGN 394
Query: 315 LCKNSCDACKHP 326
C+ CD C +P
Sbjct: 395 -CQE-CDNCLNP 404
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 184/327 (56%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+K Y L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 715 SKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHD 774
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD+ L + P V SFNR NL Y+V
Sbjct: 775 FRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDV 834
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +A L G++ AYHAGL D
Sbjct: 835 LPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 894
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +YQESGRAGRD
Sbjct: 895 RDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEM 954
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 955 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVDCRRI 1007
Query: 302 KILESFGEQ-IPVSLCKNS----CDAC 323
++L FGE + CK+ CD C
Sbjct: 1008 QLLAYFGETDFNPNFCKDHPEVICDNC 1034
>gi|387592527|gb|EIJ87551.1| hypothetical protein NEQG_02098 [Nematocida parisii ERTm3]
gi|387595153|gb|EIJ92778.1| hypothetical protein NEPG_02177 [Nematocida parisii ERTm1]
Length = 861
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/321 (40%), Positives = 196/321 (61%), Gaps = 14/321 (4%)
Query: 8 YEDLDSGKPSLRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+E + P +++Y TPEL + F L+ + + L IDEAHC+S WGHDFRP
Sbjct: 424 HEPTEKRMPVTKIVYATPELLVESQTFNRALETLSQQNRLTRFVIDEAHCVSQWGHDFRP 483
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
Y +L L+ P++PI ALTATA V+KDV ++L L+N + SFNRPNL Y V K
Sbjct: 484 DYTQLFRLKERYPNIPITALTATATAAVKKDVTDALRLKNCKIFTQSFNRPNLKYRVIPK 543
Query: 127 DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKAR 184
+ A++ S ++ + + I+YCL + C+ L+ L GI YHAGL+ K R
Sbjct: 544 --TKNQIAEIVSFIETHYPEDSGIIYCLSKRDCEWLAETLQKDHGIRAGYYHAGLSTKER 601
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ +W SS +V+VAT+AFGMGID+KDVR V H+++PKS+E +YQE+GRAGRDQL S+
Sbjct: 602 TERAREWDSSHIRVIVATIAFGMGIDKKDVRYVLHYSLPKSLEGYYQETGRAGRDQLNSE 661
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKI 303
+LYY D++++++++ +N+S ++++ S + R +++ YCE + CRR +
Sbjct: 662 CVLYYTYSDKKKIDYMIDRNESASAEAKSRQRRH-------LQEVISYCENKTDCRRHLL 714
Query: 304 LESFGEQIPVSLCKNSCDACK 324
L FGE C + CD C+
Sbjct: 715 LHYFGETFN-KFCGDGCDNCQ 734
>gi|386743723|ref|YP_006216902.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
gi|384480416|gb|AFH94211.1| ATP-dependent DNA helicase RecQ [Providencia stuartii MRSN 2154]
Length = 608
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 188/314 (59%), Gaps = 26/314 (8%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LLYV PE T F+S+L + ++L+A+DEAHC+S WGHDFRP YR + LR
Sbjct: 115 AIKLLYVAPERLLTDYFLSQLSSWN----ISLLAVDEAHCVSQWGHDFRPEYRAIGQLRQ 170
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYA 134
+ PDVPI+ALTATA + D++ L L +PL+ SSF+RPN+ Y + +YK L
Sbjct: 171 HFPDVPIMALTATADETTRADIVRLLALHDPLIQISSFDRPNIRYTLVEKYKPL-----D 225
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L +KA IVYC R+ +E + L G+S AAYHAGL+++ R V D ++
Sbjct: 226 QLWFFIKAQKGKAGIVYCNSRSKVEETAERLQKRGLSVAAYHAGLDNQQREWVQDAFLKD 285
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
Q+VVATVAFGMGI++ +VR V HF+IP+++EA+YQE+GRAGRD + ++++L+Y D
Sbjct: 286 NLQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAVLFYDPADM 345
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE--QIP 312
+ L + + Q ER +I+ F+ E CRR +L FGE Q P
Sbjct: 346 AWLRRCLEEKPAGLQQDI---ERHKLNAIAAFA------EAQTCRRLVLLNYFGENRQAP 396
Query: 313 VSLCKNSCDACKHP 326
C N CD C P
Sbjct: 397 ---CGN-CDICLDP 406
>gi|90419404|ref|ZP_01227314.1| putative ATP-dependent DNA helicase [Aurantimonas manganoxydans
SI85-9A1]
gi|90336341|gb|EAS50082.1| putative ATP-dependent DNA helicase [Aurantimonas manganoxydans
SI85-9A1]
Length = 632
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 186/326 (57%), Gaps = 25/326 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ + DL +G+ L LLYVTPE + GF L ++ + L AIDEAHC+S+WGHD
Sbjct: 126 RDTVRADLLAGR--LDLLYVTPERIVSEGFRRTLSRVR----IALFAIDEAHCVSAWGHD 179
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR L +L + P VP +ALTATA P + D++E L L + V +SF+RPN+ Y +
Sbjct: 180 FRPEYRLLETLADDFPSVPRIALTATADPTTRADIIERLRLTDAPVYMTSFDRPNIRYAI 239
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+D + L S L+ + IVYCL R +E +A+L+ GI YHAGL+
Sbjct: 240 VERD---NPKKQLLSFLERHEGASGIVYCLSRRKVEETAAWLNTQGIRALPYHAGLDASV 296
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R++ +++ +VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD PS
Sbjct: 297 RAANQAAFLNEENLCLVATVAFGMGIDKPDVRFVAHLDLPSSVEAYYQETGRAGRDGQPS 356
Query: 244 KSLLYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
+ + YGM D RRRM +Q + ++ ER+ ++ CE + CRR
Sbjct: 357 DAWMAYGMQDVVQRRRM-----IDQGGSEETIKRVERAK------LDALLAICETADCRR 405
Query: 301 KKILESFGEQIPVSLCKNSCDACKHP 326
IL FGE C N CD C P
Sbjct: 406 AAILAHFGEHHE-GRCGN-CDTCLSP 429
>gi|421853205|ref|ZP_16285883.1| DNA helicase RecQ [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
gi|371478547|dbj|GAB31086.1| DNA helicase RecQ [Acetobacter pasteurianus subsp. pasteurianus LMG
1262 = NBRC 106471]
Length = 626
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 191/324 (58%), Gaps = 19/324 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI DL +G+ + LLY++PE + G + +L +I L+++AIDEAHCIS+WGH+F
Sbjct: 120 AKIRSDLANGR--IDLLYISPERLLSSGTLDRLVRIP----LSVIAIDEAHCISAWGHEF 173
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR L++L + P VP +ALTATA + ++D++ +L + + VL SSF+RPNL V+
Sbjct: 174 RPEYRALTALPRHFPHVPRIALTATADERTREDILAALDMPHAEVLVSSFHRPNLNISVQ 233
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L + L+ + D +IVYC R + ++A L G AYHAGL+ +
Sbjct: 234 PKA---SETRQLITALERHKDAASIVYCGSRARTERMAASLRERGWPALAYHAGLSPIEK 290
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ L + S V+VAT+AFGMGIDR DVR V H ++P S EA+YQ+ GRAGRD LPS
Sbjct: 291 RAALLRFRSGEPLVIVATIAFGMGIDRPDVRAVVHLDMPASPEAYYQQIGRAGRDGLPSD 350
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+LL YG +D R + L ++ + S+ R R M+ E +GCR + +L
Sbjct: 351 TLLLYGGEDMARARYWLDQSAAPESEKRIMRSR--------LEAMIALTETTGCRTRALL 402
Query: 305 ESFGEQIPVSLCKNSCDACKHPNL 328
FGE++ C + CD C HP L
Sbjct: 403 HCFGEEL-AEPCGH-CDNCLHPVL 424
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 188/330 (56%), Gaps = 16/330 (4%)
Query: 2 QVKTKIYEDLDSGKPS--LRLLYVTPELTATP-GFMSKLKKIHSRGLLNLVAIDEAHCIS 58
+ + +++ LD+ P L+LLYVTPE+ + F+ K+ ++ R L + IDEAHC+S
Sbjct: 1297 ETRRMVFQKLDTPHPEHELQLLYVTPEMVSKNMQFVGKMGDLYQRNKLARIVIDEAHCVS 1356
Query: 59 SWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
WGHDFRP Y+ + R P VP++ALTATA V DV +L + SFNRPN
Sbjct: 1357 QWGHDFRPDYKAIGEFRKRFPGVPVMALTATATHNVILDVKHNLAMDTCETFSQSFNRPN 1416
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAYLSAG-GISCAAYH 176
L+YEVR K+ + A + +++ D I+Y L R + + ++ L GI YH
Sbjct: 1417 LYYEVRLKE--QNLVARIAELIQEKYDGQTGIIYTLSRKSAENIAKNLEEKHGIRAKHYH 1474
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
A + + + V DW + +VVVAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRA
Sbjct: 1475 ASITTEEKIKVQHDWQAGDVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1534
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD PS LY+ D + + ++++ + +ER + +V+YCE
Sbjct: 1535 GRDGKPSDCYLYFAYGDIQSLRRMIAEGDG----DYEQKERQKHM----LNMVVNYCESQ 1586
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR+++L FGE+ CK+ CD C++
Sbjct: 1587 HTCRREEVLRYFGEEFDFRKCKDGCDNCRY 1616
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 185/309 (59%), Gaps = 12/309 (3%)
Query: 18 LRLLYVTPELTATPGFM-SKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ + G + + + +H + +L V +DEAHC+SSWGHDFRP Y+ LS +
Sbjct: 621 LDLVYLSPEMISASGMVRNAIATLHKKKMLARVVVDEAHCVSSWGHDFRPDYKALSYFKT 680
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-RYKDLLDDAYAD 135
P++P++ALTATA V+ D++ +L L++P K SFNR NL+YEV K + + A
Sbjct: 681 EYPEIPMMALTATANEHVRMDIIHNLNLKHPKFFKQSFNRSNLYYEVLPKKKTVVEEIAQ 740
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L + + + I+YC + +C++ + L+ GI C YHAG+ R V W ++
Sbjct: 741 LIN--RKYKNMTGIIYCHSKNSCEQTATRLADYGIKCDFYHAGMTQDDRQRVQLGWQTNE 798
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QV+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S ++YY M D R
Sbjct: 799 IQVICATIAFGMGIDKPDVRFVIHLTLPRNLEGYYQETGRAGRDGKHSDCIMYYSMRDAR 858
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVS 314
++ ++ ++ K F + ++ ++ Q+ YCE + CRR+++L+ F E
Sbjct: 859 TLQGMIMRD--KELDRF-----NKEQHVNKLRQVTQYCENTTDCRRQQVLQYFNETFNRK 911
Query: 315 LCKNSCDAC 323
C CD C
Sbjct: 912 DCHKQCDNC 920
>gi|329960081|ref|ZP_08298545.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328533033|gb|EGF59806.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 603
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L+ P + SSF+RPNL V+ + +
Sbjct: 158 QFPHVPIIALTATADKITREDIIKQLHLEQPKIFISSFDRPNLSLAVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + ++YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIGRHPGESGVIYCMSRSKTESVAQMLQKQGIKAAVYHAGLSADKRDRAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T +I +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATESGQQSINIEKLQRMQQYAEADICRRRILLSYFGENTTHD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|15966070|ref|NP_386423.1| ATP-dependent DNA helicase [Sinorhizobium meliloti 1021]
gi|384530203|ref|YP_005714291.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti BL225C]
gi|384535316|ref|YP_005719401.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti SM11]
gi|433614143|ref|YP_007190941.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti GR4]
gi|15075340|emb|CAC46896.1| Probable ATP-dependent DNA helicase [Sinorhizobium meliloti 1021]
gi|333812379|gb|AEG05048.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti BL225C]
gi|336032208|gb|AEH78140.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti SM11]
gi|429552333|gb|AGA07342.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti GR4]
Length = 636
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 172/312 (55%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE T GF + + L AIDEAHC+S WGHDFRP YR L L
Sbjct: 140 LDLLYVTPERAVTDGFAEMIADAD----IALFAIDEAHCVSQWGHDFRPEYRGLGCLAER 195
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P + D++E L L V SSF+RPN+ YE+ +D L
Sbjct: 196 FPGVPRIALTATADPHTRDDMIERLGLGGARVFASSFDRPNIAYEIVERD---QPRQQLL 252
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L D IVYCL R ++ + +L A GI YHAG+ AR + D ++
Sbjct: 253 RFLSRFKDASGIVYCLSRAKVEDTAEWLDAQGIRALPYHAGMERAARDAHQDAFLKEENL 312
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D R
Sbjct: 313 CLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQR 372
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM ++ + ER+ S ++ CE +GCRR+ IL FGE P
Sbjct: 373 RRM-----IDEGGAPEEIKRIERAKLNS------LLAICETAGCRRQAILAHFGEAHPGG 421
Query: 315 LCKNSCDACKHP 326
C + CD C P
Sbjct: 422 -CGH-CDTCLKP 431
>gi|334317075|ref|YP_004549694.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti AK83]
gi|334096069|gb|AEG54080.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti AK83]
Length = 618
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 172/312 (55%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE T GF + + L AIDEAHC+S WGHDFRP YR L L
Sbjct: 122 LDLLYVTPERAVTDGFAEMIADAD----IALFAIDEAHCVSQWGHDFRPEYRGLGCLAER 177
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P + D++E L L V SSF+RPN+ YE+ +D L
Sbjct: 178 FPGVPRIALTATADPHTRDDMIERLGLGGARVFASSFDRPNIAYEIVERD---QPRQQLL 234
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L D IVYCL R ++ + +L A GI YHAG+ AR + D ++
Sbjct: 235 RFLSRFKDASGIVYCLSRAKVEDTAEWLDAQGIRALPYHAGMERAARDAHQDAFLKEENL 294
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D R
Sbjct: 295 CLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQR 354
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM ++ + ER+ S ++ CE +GCRR+ IL FGE P
Sbjct: 355 RRM-----IDEGGAPEEIKRIERAKLNS------LLAICETAGCRRQAILAHFGEAHPGG 403
Query: 315 LCKNSCDACKHP 326
C + CD C P
Sbjct: 404 -CGH-CDTCLKP 413
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 183/327 (55%), Gaps = 15/327 (4%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+K Y L P ++LLYVTPE + A+ +S L+ ++ R LL IDEAHC+S WGHD
Sbjct: 477 SKTYMQLSKKDPIIKLLYVTPEKVCASNRLLSALENLYDRKLLARFVIDEAHCVSQWGHD 536
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR Y++L+ LR VP++ALTATA P+VQKD+ L + P V SFNR NL Y+V
Sbjct: 537 FRKDYKRLNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDV 596
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K A L + K + I+YCL R CD +A L G++ AYHAGL D
Sbjct: 597 LPKKPKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 656
Query: 184 RSSVLDDWISSRK-QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V W++ QV+ AT+AFGMGID+ DVR V H ++PKS+E +Y ESGRAGRD
Sbjct: 657 RDLVQKKWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYHESGRAGRDGEM 716
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
S LL+Y D R+ ++ + NS + T ++ MV YCE CRR
Sbjct: 717 SHCLLFYSYSDVTRLRRLILMEKDGNSHTRQTH-------FNNLYSMVHYCENVVDCRRI 769
Query: 302 KILESFGEQ-IPVSLCKNS----CDAC 323
++L FGE + CK+ CD C
Sbjct: 770 QLLAYFGETDFNPNFCKDHPEVICDNC 796
>gi|302782143|ref|XP_002972845.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
gi|300159446|gb|EFJ26066.1| hypothetical protein SELMODRAFT_98462 [Selaginella moellendorffii]
Length = 602
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 186/324 (57%), Gaps = 15/324 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+ ++L +PS +LLYVTPE L + F L + LL IDEAHC+S WGHDFR
Sbjct: 283 VMQELRKQRPSCKLLYVTPEKLAKSASFQDVLHGLDRHRLLARFVIDEAHCVSQWGHDFR 342
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P VP++ALTATA V+KD++ L + + V+++SF+RPNL Y+V
Sbjct: 343 PDYKALGILKQQFPRVPLMALTATATHSVRKDILSILRIPHATVIETSFDRPNLKYKVVI 402
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKA 183
KD D L ++K + C IVYCL + C ++ YLS I A YHAGL+++
Sbjct: 403 KD-PKDPLEQLGKIIKDDFARQCGIVYCLSKNECRDVCDYLSNKCKIKTAFYHAGLSNRE 461
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R V + W + QV+ AT+AFGMGID+ DVR V H + K++E +YQESGRAGRD L S
Sbjct: 462 RVLVQNKWQKNEVQVICATIAFGMGIDKADVRFVIHNTMSKAIEGYYQESGRAGRDGLSS 521
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKK 302
L+ Y D R+ +L ++ SF K+ + +M +YCE CRRK
Sbjct: 522 TCLVLYQKKDFSRIACMLRSGYGRSKDSF-------KRGVEQGRKMQEYCEEKNQCRRKL 574
Query: 303 ILESFGEQIPVSLC---KNSCDAC 323
+LE FGE + C N CD C
Sbjct: 575 LLEYFGENSSQNGCPTGPNRCDNC 598
>gi|330996065|ref|ZP_08319959.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
gi|329574062|gb|EGG55640.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
Length = 727
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 176/308 (57%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + L+ + ++ AIDEAHCIS WGHDFRP YR++ + N +
Sbjct: 114 KLLYVAPESLTKDENVDFLRNVK----ISFYAIDEAHCISEWGHDFRPEYRRIRPIINDI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D+ ++L + + KSSFNRPNL+YEVR K + D+
Sbjct: 170 GTAPVIALTATATDKVRGDIKKNLGMTDAKEFKSSFNRPNLYYEVRNK--TKNVDKDIIR 227
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K I+Y L R +EL+ L A I+ AYHAG++ RS DD+I R V
Sbjct: 228 FIKQRPGKSGIIYALSRKRVEELAEILRANDINARAYHAGMDSATRSQTQDDFIMERIDV 287
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + YY D +++E
Sbjct: 288 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCVTYYAYKDLQKLE 347
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + S+ Y E S CRRK +L FGE+ C N
Sbjct: 348 --------KFMEGKPVAEQDIGRQL--LSETAAYAESSVCRRKFLLHYFGEEYHEENCGN 397
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 398 -CDNCLHP 404
>gi|407721377|ref|YP_006841039.1| ATP-dependent DNA helicase recQ [Sinorhizobium meliloti Rm41]
gi|407319609|emb|CCM68213.1| ATP-dependent DNA helicase recQ [Sinorhizobium meliloti Rm41]
Length = 639
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 172/312 (55%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE T GF + + L AIDEAHC+S WGHDFRP YR L L
Sbjct: 140 LDLLYVTPERAVTDGFAEMIADAD----IALFAIDEAHCVSQWGHDFRPEYRGLGCLAER 195
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P + D++E L L V SSF+RPN+ YE+ +D L
Sbjct: 196 FPGVPRIALTATADPHTRDDMIERLGLGGARVFASSFDRPNIAYEIVERD---QPRQQLL 252
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L D IVYCL R ++ + +L A GI YHAG+ AR + D ++
Sbjct: 253 RFLSRFKDASGIVYCLSRAKVEDTAEWLDAQGIRALPYHAGMERAARDAHQDAFLKEENL 312
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D R
Sbjct: 313 CLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQR 372
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM ++ + ER+ S ++ CE +GCRR+ IL FGE P
Sbjct: 373 RRM-----IDEGGAPEEIKRIERAKLNS------LLAICETAGCRRQAILAHFGEAHPGG 421
Query: 315 LCKNSCDACKHP 326
C + CD C P
Sbjct: 422 -CGH-CDTCLKP 431
>gi|418403196|ref|ZP_12976692.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti CCNWSX0020]
gi|359502880|gb|EHK75446.1| ATP-dependent DNA helicase RecQ [Sinorhizobium meliloti CCNWSX0020]
Length = 636
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 172/312 (55%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE T GF + + L AIDEAHC+S WGHDFRP YR L L
Sbjct: 140 LDLLYVTPERAVTDGFAEMIADAD----IALFAIDEAHCVSQWGHDFRPEYRGLGCLAER 195
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P + D++E L L V SSF+RPN+ YE+ +D L
Sbjct: 196 FPGVPRIALTATADPHTRDDMIERLGLGGARVFASSFDRPNIAYEIVERD---QPRQQLL 252
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L D IVYCL R ++ + +L A GI YHAG+ AR + D ++
Sbjct: 253 RFLSRFKDASGIVYCLSRAKVEDTAEWLDAQGIRALPYHAGMERAARDAHQDAFLKEENL 312
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D R
Sbjct: 313 CLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQR 372
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM ++ + ER+ S ++ CE +GCRR+ IL FGE P
Sbjct: 373 RRM-----IDEGGAPEEIKRIERAKLNS------LLAICETAGCRRQAILAHFGEAHPGG 421
Query: 315 LCKNSCDACKHP 326
C + CD C P
Sbjct: 422 -CGH-CDTCLKP 431
>gi|254472207|ref|ZP_05085607.1| ATP-dependent DNA helicase RecQ [Pseudovibrio sp. JE062]
gi|211958490|gb|EEA93690.1| ATP-dependent DNA helicase RecQ [Pseudovibrio sp. JE062]
Length = 612
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 187/320 (58%), Gaps = 19/320 (5%)
Query: 8 YEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPS 67
Y DL +G+ L LLYV PE F+ L++++ RGL+ L+AIDEAHCIS WGHDFRP
Sbjct: 110 YRDLRAGE--LDLLYVAPERLVRSEFVGLLEELNQRGLIALLAIDEAHCISQWGHDFRPE 167
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
YR+L+++R L VP LA+TATA +KD+ E L L ++ S F+RPN+ Y V K
Sbjct: 168 YRELTNVRAKLEGVPCLAVTATADEPTRKDIQERLNLSR--LISSGFDRPNITYTVGIKH 225
Query: 128 LLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
+ L LK I+YCL R +E +A+L G YHAG + R +
Sbjct: 226 ---NPKQQLRRFLKERPAGESGIIYCLSRKKVEETAAWLVDEGFDALPYHAGFDSSVREA 282
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D +I ++VATVAFGMGID+ +VR V H ++PK++EA+YQE+GRAGRD LPS++
Sbjct: 283 NQDRFIKEEGLIMVATVAFGMGIDKPNVRFVAHLDLPKNIEAYYQETGRAGRDGLPSEAW 342
Query: 247 LYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILES 306
L YGM D + ++ ++++ +Q R++ + YCE + CRR +L
Sbjct: 343 LVYGMQDVVFLNQMIDRSEAPENQKQIERQK--------LRSFLAYCETATCRRSVLLRY 394
Query: 307 FGEQIPVSLCKNSCDACKHP 326
FG++ C N CD C +P
Sbjct: 395 FGDE--CEPCGN-CDTCLNP 411
>gi|123494887|ref|XP_001326616.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909533|gb|EAY14393.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1447
Score = 239 bits (611), Expect = 1e-60, Method: Composition-based stats.
Identities = 126/327 (38%), Positives = 199/327 (60%), Gaps = 11/327 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I +++G+ LR L++TPE ++ + I+ + L ID+AHC+S WGHDF
Sbjct: 447 EIVRKINNGR--LRFLFMTPEKIMMGSINTRFIGSIYEKKRLTRFVIDKAHCVSQWGHDF 504
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y +L L+ PD+PI+ALTATA VQ+D+ E L ++N V KSSFNRPN+FYEV
Sbjct: 505 RPDYTQLGVLKTMYPDIPIMALTATATDAVQRDIKEILNIRNCHVFKSSFNRPNIFYEVI 564
Query: 125 YKDLLDDAYADLCSVLKANG--DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K+ +++ ++ +KA+G ++ I++C+ LS Y++ G + A YH + +
Sbjct: 565 QKE--ENSKDEMIRWIKAHGYENSTGIIFCMTTPETVNLSQYMNTKGFNTAYYHGKMENA 622
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
R V + W++++ +V+VAT+AFGMGID+ DVR V H +P+S+EA+YQESGRAGRD
Sbjct: 623 DRKKVQEMWMNNQIRVIVATLAFGMGIDKPDVRYVIHMTMPRSLEAYYQESGRAGRDGKQ 682
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY-CEGSGCRRK 301
S LL++ M D+ R+ ++S +S+ + ++R + + M +Y + + CRR
Sbjct: 683 SHCLLFFSMGDKARVHRLISYTESE--EQIKNKDRLEVEE-NLLEHMAEYGLDKTTCRRV 739
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNL 328
+L FGEQ C +CD C+ NL
Sbjct: 740 LLLSYFGEQFDPDNCGMTCDNCQKQNL 766
>gi|145220257|ref|YP_001130966.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
gi|145206421|gb|ABP37464.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
Length = 622
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/320 (38%), Positives = 184/320 (57%), Gaps = 19/320 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ K+ ++L+SG SL LLYV PE A F + K+ +++ IDEAHCIS WGHD
Sbjct: 108 RRKVLDELESG--SLDLLYVAPERFALDSFRKLIGKVP----VSMAVIDEAHCISEWGHD 161
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y +LSSL DVP+ TATA +VQ D + L L+ P +++SF+RPNL Y V
Sbjct: 162 FRPDYLQLSSLVTMFRDVPVAGFTATATQRVQLDTLRRLALREPFTVRASFDRPNLTYSV 221
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+KD +D A + S+L+A+ I+Y R + ++ +A L A G AYHAGL D+
Sbjct: 222 LFKDGVD---AQIVSLLRAHSGKAGIIYRTSRKSVNDTAAMLQAKGFRALAYHAGLGDEE 278
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R + +I V+VAT+AFGMGID+ ++R V H ++PKS+E +YQE+GRAGRD P+
Sbjct: 279 RERNQNAFIRDEVDVIVATIAFGMGIDKSNIRFVIHADMPKSIENYYQETGRAGRDGEPA 338
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
L + D+ ++ F + + + ++ +++ ++ + CRRK +
Sbjct: 339 HCTLLFSQGDQAKLRFFIDTMEDEGEKA---------RALEALRKVASFASSGVCRRKAL 389
Query: 304 LESFGEQIPVSLCKNSCDAC 323
L FGEQ C SCD C
Sbjct: 390 LNYFGEQYSKENC-GSCDVC 408
>gi|350288973|gb|EGZ70198.1| ATP-dependent DNA helicase [Neurospora tetrasperma FGSC 2509]
Length = 772
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 214/391 (54%), Gaps = 44/391 (11%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
IY DL +G P +RLLYVTPEL + F KLK ++ + L + +DEAHCIS WGHDFR
Sbjct: 395 IYADLATGHPLMRLLYVTPELCSGDHFRRKLKLVYEQHELARIVVDEAHCISEWGHDFRK 454
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLK---SSFNRPNLFYE 122
+++LS R PDVP++ LTATA +V+ DV+ +L L + P LK + +RPNL E
Sbjct: 455 DFKRLSWFRETFPDVPVMCLTATANEQVRHDVLTTLGLDKTPGKLKIFSMTAHRPNLHLE 514
Query: 123 VRYK-DLLDDAYADLCSVLK----------------ANGDTC----AIVYCLERTTCDEL 161
VR+ D +D Y D + LK A G+ I+Y + R + L
Sbjct: 515 VRFTSDEANDRYDDFVTWLKGVYDRRAAADRKAELDATGERVENVPGIIYTISRDEVESL 574
Query: 162 SAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVCH 219
+A L GI +HA L ++ + L WI++ V+VAT AFGMGID+++VR V H
Sbjct: 575 AAALRHDGIGARPFHAKLPNQVKEETLAKWIANDPGYDVIVATTAFGMGIDKENVRFVVH 634
Query: 220 FNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM-EFILSKNQSKNSQSFSTRERS 278
+ +PKS E +YQE+GRAGRD S LYY +DR R+ ++ + SKN+ + +
Sbjct: 635 WRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDRDRVCNLVMREPVSKNASADGIINKQ 694
Query: 279 SKKSISDFSQMVDYCEGSG-CRRKKILESFGE-QIPVSLCKNSCDACKHPNLLAKYLGEL 336
+++ ++V YCE +G CR I FGE Q+P C +CD K P L + +
Sbjct: 695 ARQ--MSLGRLVAYCEDTGSCRHAAICRYFGETQVPA--CDYACDWHKDPQGLKRRMA-- 748
Query: 337 TSAVLQKNHFSQIFISSQDMTDGGQYSEFWN 367
+ S+ ++S+Q + G Y E+W+
Sbjct: 749 ------RGLASEEWVSTQ--REEGMYDEYWS 771
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 184/312 (58%), Gaps = 14/312 (4%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+RLLYVTPE+ + F++ L K++S L + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 946 VRLLYVTPEMIGKSQAFLNALDKVYSNDKLARIVIDEAHCVSQWGHDFRPDYKTLGEVRR 1005
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL-LDDAYAD 135
P VP++ALTATA P V D+ +L + + SFNRPNLFY++R K + AD
Sbjct: 1006 RYPKVPVMALTATATPHVIVDIKLNLSIPQCEIFSQSFNRPNLFYDIRTKGKNIVQTIAD 1065
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWISS 194
L G+T IVY L R + + ++ L GIS YHA + + ++ V W S
Sbjct: 1066 LIQS-DHEGET-GIVYTLSRKSAETIAKKLRDQSGISAHHYHAKMETEEKTDVQRKWQSG 1123
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+ +VVVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD S LY+G D
Sbjct: 1124 QIKVVVATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRAGRDGGQSHCYLYFGYGDI 1183
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPV 313
+ +++ + Q R+R S+ ++++D+CE CRR+ IL FGE+
Sbjct: 1184 TSLRKMINDGEGNQEQ----RDRQSQM----LNRVIDFCEDKRECRRQSILRYFGEKFDP 1235
Query: 314 SLCKNSCDACKH 325
+ C +CD C++
Sbjct: 1236 ASCNKTCDNCRN 1247
>gi|341038504|gb|EGS23496.1| ATP-dependent helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 421
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/355 (39%), Positives = 200/355 (56%), Gaps = 36/355 (10%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
IY+DL +G P RLLYVTPEL ++ F +L+ +H + L +AIDEAHCIS WGHDFR
Sbjct: 48 IYQDLATGHPRTRLLYVTPELCSSEHFRRQLRLVHEQRELARIAIDEAHCISEWGHDFRK 107
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKS---SFNRPNLFYE 122
+++LS R PDVPI+ LTATA +V++D++ +L L + P LK+ + +RPNL E
Sbjct: 108 DFKRLSWFREMFPDVPIMCLTATANEQVRRDILTTLGLDRTPERLKNFTMTAHRPNLHLE 167
Query: 123 VRYK-DLLDDAYADLCSVLK----------------ANGDTC----AIVYCLERTTCDEL 161
VR+ D +D + D + LK A G+ I+Y L R C+ L
Sbjct: 168 VRFTSDQANDRFDDFVTWLKGVYARRSQPERKAELDAVGERVQNVPGIIYTLSRDECEML 227
Query: 162 SAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRLVCH 219
+A L I +HA L + + L WI++ ++VAT AFGMGID+++VR V H
Sbjct: 228 AAALRQEEIGARPFHAKLPKEVKEETLARWIANEPGYDIIVATTAFGMGIDKENVRFVVH 287
Query: 220 FNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSS 279
+ +PKS E +YQE+GRAGRD S LYY +DR R+ ++ ++ N + R RS
Sbjct: 288 WRLPKSFEGYYQEAGRAGRDGNASYCFLYYAREDRDRVCNMVMRDGGPNDTNREARMRS- 346
Query: 280 KKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYL 333
S++V+YCE + CR I + FGE+ V C +CD K P L + +
Sbjct: 347 ------LSRLVEYCESTDTCRHAFICKYFGEE-KVPECDYACDWHKDPQGLKRRM 394
>gi|222107008|ref|YP_002547799.1| ATP-dependent DNA helicase RecQ [Agrobacterium vitis S4]
gi|221738187|gb|ACM39083.1| ATP-dependent DNA helicase RecQ [Agrobacterium vitis S4]
Length = 618
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 177/310 (57%), Gaps = 17/310 (5%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L LLYVTPE TP F K + + L AIDEAHC+S WGHDFRP YR+L L
Sbjct: 121 TLDLLYVTPERIVTPAF----KDVIGSAKIALFAIDEAHCVSQWGHDFRPEYRELGKLAE 176
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP +ALTATA P + D+++ L LQ+ V +SF+RPN+ YE+ +D L
Sbjct: 177 TYPGVPRMALTATADPHTRDDIIDKLGLQSAKVFTTSFDRPNIAYEIVERD---QPRQQL 233
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L + IVYCL R +E + +L+ G+ AYHAG++ R + D ++
Sbjct: 234 LRFLSRHEGESGIVYCLSRAKVEETAEWLNTQGVRSLAYHAGMDRVLRDANQDAFLKEEN 293
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS + YGM D
Sbjct: 294 LCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSDVWMAYGMAD--- 350
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
++ + + + ++ E + + + ++ CE GCRR+ IL FGE P S C
Sbjct: 351 ---VIQRGRMIDGG--TSAEEVKRVERAKLNALLAICETPGCRRQAILAHFGEVHPGS-C 404
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 405 GN-CDTCLKP 413
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/318 (40%), Positives = 186/318 (58%), Gaps = 25/318 (7%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSY 68
E+L S + +L+Y+ PE +S L I + ++L+AIDEAHCISSWGHDFRP+Y
Sbjct: 102 ENLKSN--TFKLVYIAPE------SLSYLDVIFNELTISLIAIDEAHCISSWGHDFRPAY 153
Query: 69 RKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL 128
L L++ P PILALTATA + D+ + L L+NP +SF+R NL EVR
Sbjct: 154 TNLGYLKSRFPSTPILALTATADKATRTDITKQLNLKNPKTFVASFDRKNLSLEVRPAL- 212
Query: 129 LDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVL 188
D + ++ + I+YCL R T +EL+ L GI+ AYHAGL +K R+
Sbjct: 213 --DRVKQIIDFVENKPNESGIIYCLSRKTTEELAEKLQKSGITAKAYHAGLENKLRAKTQ 270
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
D++I+ QVV AT+AFGMGID+ +VR V H+N+PK++E +YQE GRAGRD LP++++L+
Sbjct: 271 DEFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLPAETVLF 330
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFG 308
D ++ Q F++ +S ++ +M Y + CRRK +L FG
Sbjct: 331 ESYADVIQL------------QKFASEGLNSDVQLAKLDRMKQYADALSCRRKILLSYFG 378
Query: 309 EQIPVSLCKNSCDACKHP 326
E + + C N CD CK P
Sbjct: 379 ELVTEN-CGN-CDICKKP 394
>gi|332878105|ref|ZP_08445835.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047651|ref|ZP_09109249.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332684067|gb|EGJ56934.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529339|gb|EHG98773.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 727
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/308 (41%), Positives = 176/308 (57%), Gaps = 17/308 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE + L+ + ++ AIDEAHCIS WGHDFRP YR++ + N +
Sbjct: 114 KLLYVAPESLTKDENVDFLRNVK----ISFYAIDEAHCISEWGHDFRPEYRRIRPIINEI 169
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P++ALTATA KV+ D+ ++L + + KSSFNRPNL+YEVR K + D+
Sbjct: 170 GAAPVIALTATATDKVRGDIKKNLGMTDAKEFKSSFNRPNLYYEVRNK--TKNVDKDIIR 227
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+K I+Y L R +EL+ L A I+ AYHAG++ RS DD+I R V
Sbjct: 228 FIKQRPGKSGIIYALSRKRVEELAEILRANDINARAYHAGMDSATRSQTQDDFIMERIDV 287
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD + YY D +++E
Sbjct: 288 IVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCITYYTYKDLQKLE 347
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K + E+ + + S+ Y E S CRRK +L FGE+ C N
Sbjct: 348 --------KFMEGKPVAEQDIGRQL--LSETAAYAESSVCRRKFLLHYFGEEYHEENCGN 397
Query: 319 SCDACKHP 326
CD C HP
Sbjct: 398 -CDNCLHP 404
>gi|383113297|ref|ZP_09934070.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|382948819|gb|EFS32303.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
Length = 608
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 110 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 163
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P V SSF+RPN+ V+ + +
Sbjct: 164 QFPQIPIIALTATADKITREDIVRQLHLNHPRVFISSFDRPNISLTVKRGFQAKEKNKAI 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 224 LEFIHRHGGESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 284 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL-- 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K S+++Q E+ +M Y E CRR+ +L FGE C
Sbjct: 342 --ILLTKFASESNQQSINLEK--------LQRMQQYAEADICRRRILLSYFGETTTED-C 390
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 391 GN-CDVCKNP 399
>gi|153809531|ref|ZP_01962199.1| hypothetical protein BACCAC_03849 [Bacteroides caccae ATCC 43185]
gi|423219543|ref|ZP_17206039.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149127839|gb|EDM19062.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392624748|gb|EIY18826.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 601
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEKDYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGMLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 158 QFPQVPIVALTATADKITREDIVRQLHLVHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R
Sbjct: 218 LEFINRHSGESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSAQKRDETQDDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATESNQQSINLEKLQRMQQYAEADICRRRILLSYFGE-TATEDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|336398037|ref|ZP_08578837.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
gi|336067773|gb|EGN56407.1| ATP-dependent DNA helicase RecQ [Prevotella multisaccharivorax DSM
17128]
Length = 740
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/315 (40%), Positives = 181/315 (57%), Gaps = 23/315 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYR-------KL 71
+LLYV PE +S + ++ +A+DEAHCIS WGHDFRP YR K+
Sbjct: 112 KLLYVAPESLNKEDNLSFFQSFK----ISFIAVDEAHCISEWGHDFRPEYRNIKPTIDKI 167
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
+ R + +P++ALTATA KV+ D+ +L + + KSSFNRPNL+YEVR K +D
Sbjct: 168 AKARQ-VEHIPVIALTATATDKVRMDIKTNLGMADAKEFKSSFNRPNLYYEVRQKVSDED 226
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
+ + +K + I+YCL R +EL+ L G A YHAGL+++ R+ DD+
Sbjct: 227 TDSQIIKFIKQHSGKSGIIYCLSRKKVEELAKKLCLNGFRAAPYHAGLDNEVRARTQDDF 286
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
+ ++VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRAGRD L +Y
Sbjct: 287 LKENIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGICLAFYSP 346
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
D +++ SK S S E+ + + + +Q Y E + CRRK +L FGE
Sbjct: 347 KDLKKL--------SKFMDSKSETEKEIGRQLLEETQA--YAETAVCRRKVLLNYFGELY 396
Query: 312 PVSLCKNSCDACKHP 326
P C N CD CKHP
Sbjct: 397 PRDNCDN-CDNCKHP 410
>gi|443309958|ref|ZP_21039633.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
gi|442780011|gb|ELR90229.1| ATP-dependent DNA helicase RecQ [Synechocystis sp. PCC 7509]
Length = 724
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/308 (39%), Positives = 190/308 (61%), Gaps = 15/308 (4%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QV+++ E + SGK ++LLYV PE + F+ + + + + AIDEAHC+S WG
Sbjct: 97 QVRSR-EEAILSGK--VKLLYVAPERLLSDRFLPFIDLVQHQIGIASFAIDEAHCVSEWG 153
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L +LR P+VP +ALTATA +V+ D+++ L L P++ +SFNRPNL+Y
Sbjct: 154 HDFRPDYRQLRALRQRYPNVPTIALTATATDRVRSDIIQQLNLTKPIIHVASFNRPNLYY 213
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
+V+ K AY L ++ + + I+YCL R D+++ L GIS YHAGL+D
Sbjct: 214 DVQPKQ--KQAYNQLKQLVTKH-EGAGIIYCLSRRKVDDITMKLQQDGISALPYHAGLSD 270
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R S +I +++VATVAFGMGI++ DVR V H+++P+++E++YQESGRAGRD
Sbjct: 271 AERESNQTRFIRDDARLMVATVAFGMGINKPDVRFVIHYDLPRNIESYYQESGRAGRDGG 330
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
++ +++G D + +E+++ + Q + ++ Q++DY +G+ CRR
Sbjct: 331 AARCTIFFGYGDVKTVEYLIDQKTDVQEQRIAKQQ---------LRQIIDYAQGTVCRRT 381
Query: 302 KILESFGE 309
L FGE
Sbjct: 382 IQLGYFGE 389
>gi|383316443|ref|YP_005377285.1| ATP-dependent DNA helicase RecQ [Frateuria aurantia DSM 6220]
gi|379043547|gb|AFC85603.1| ATP-dependent DNA helicase RecQ [Frateuria aurantia DSM 6220]
Length = 602
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 181/309 (58%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLYV PE +P ++ L++I + L AIDEAHC+S WGHDFRP YR+L+ L+
Sbjct: 108 LQLLYVAPERLLSPRLLAMLERIE----IALFAIDEAHCVSQWGHDFRPEYRELAELQRR 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P+ +++++E L LQ SSF+RPN+ Y V + L
Sbjct: 164 FPQVPRIALTATADPRTREEIIERLGLQQARQFLSSFDRPNIRYRVGQRQ---QGRKQLE 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ L + ++YCL R DE + +L A G + AYHAGL RS ++
Sbjct: 221 AFLADHRGDSGVIYCLSRKKVDETAGWLQAMGFNALAYHAGLEAALRSEHQQRFLREDGV 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+ + + YG++D M
Sbjct: 281 VMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPADAWMVYGLNDVVTM 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E + CRR +L +FGE C
Sbjct: 341 SQMIAQSESADDRKRIERQK--------LEALLGYAEATTCRRVLLLAAFGE-TSDGPCG 391
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 392 N-CDNCLEP 399
>gi|336171234|ref|YP_004578372.1| RecQ family ATP-dependent DNA helicase [Lacinutrix sp. 5H-3-7-4]
gi|334725806|gb|AEG99943.1| ATP-dependent DNA helicase, RecQ family [Lacinutrix sp. 5H-3-7-4]
Length = 730
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 185/326 (56%), Gaps = 25/326 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE + L+ + ++ +A+DEAHCIS WGHDFR
Sbjct: 101 QVKEDITNG--ITKLLYVAPESLTKEENVEFLRGVK----ISFMAVDEAHCISEWGHDFR 154
Query: 66 PSYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L ++ + D +PI+ LTATA PKVQ+D++++L + + K+SFNRPNL+YEVR
Sbjct: 155 PEYRNLRTIIQRIGDNIPIIGLTATATPKVQEDILKNLRMTDAKTFKASFNRPNLYYEVR 214
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K D+ D+ +K N IVYCL R +EL+ L GI YHAGL+ K R
Sbjct: 215 PKTKTVDS--DIIRFVKQNSGKTGIVYCLSRKRVEELAQVLQVNGIKAVPYHAGLDAKTR 272
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 273 AKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 332
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L YY D ++E F + + +++ I ++V +CE S RRK
Sbjct: 333 CLAYYSYKDIEKLE------------KFMSGKPVAEQEIGHALLQEVVAFCETSMSRRKF 380
Query: 303 ILESFGEQIPVSLCKNS--CDACKHP 326
IL FGE+ D +HP
Sbjct: 381 ILHYFGEEFDTETGDGGDMDDNMRHP 406
>gi|298490702|ref|YP_003720879.1| ATP-dependent DNA helicase RecQ ['Nostoc azollae' 0708]
gi|298232620|gb|ADI63756.1| ATP-dependent DNA helicase RecQ ['Nostoc azollae' 0708]
Length = 722
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/319 (43%), Positives = 197/319 (61%), Gaps = 18/319 (5%)
Query: 9 EDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSR-GLLNLVAIDEAHCISSWGHDFRPS 67
E + +GK +RLLY+ PE + F+ L + + G+ N AIDEAHC+S WGHDFRP
Sbjct: 103 EAIMNGK--VRLLYIAPERLISDKFLPLLDVVKEKIGIANF-AIDEAHCVSEWGHDFRPE 159
Query: 68 YRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD 127
YR+L L+ PDV ALTATA +V+ D+++ L L+ P V +SFNR NL+YEVR K+
Sbjct: 160 YRQLILLKKRYPDVTTTALTATATDRVRVDIIQQLGLKQPSVHIASFNRHNLYYEVRSKN 219
Query: 128 LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSV 187
AYA+L +++ N + I+YCL R DEL+ L I+ YHAGL+D RS
Sbjct: 220 --QRAYAELLEIVRENKGS-GIIYCLTRKKVDELTFKLQNDKIAALPYHAGLSDDERSKN 276
Query: 188 LDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLL 247
+I +V+VAT+AFGMGI++ DVR V HF++P+++E++YQESGRAGRD PS+ L
Sbjct: 277 QTRFIRDDIRVMVATIAFGMGINKPDVRFVVHFDLPRNLESYYQESGRAGRDSEPSRCTL 336
Query: 248 YYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESF 307
++ D + +E+ S NQ + Q E+ K Q++DY EG+ CRR L F
Sbjct: 337 FFSFGDVKTIEW--SINQKTDLQ-----EKLIAK--QQLRQVIDYAEGTDCRRTIQLAYF 387
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE+ P + C N CD C +P
Sbjct: 388 GERFPAN-CGN-CDNCLYP 404
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/354 (39%), Positives = 195/354 (55%), Gaps = 27/354 (7%)
Query: 19 RLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
RLLYVTPE A + L+ ++ RGLL + IDEAHC+S WGHDFRP Y++L L+
Sbjct: 552 RLLYVTPEKVAKSDVLLRNLESLNGRGLLARIVIDEAHCVSQWGHDFRPDYKELGILKKK 611
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYAD 135
P+LALTATA V++DV+++L L + +V + SFNRPNL+Y V + K L+D
Sbjct: 612 FEKTPVLALTATATASVKEDVVQALGLVDCIVFRQSFNRPNLWYSVIPKTKKCLED---- 667
Query: 136 LCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
+ +K N D C I+YCL R C++++ L G A YH ++ RS V W
Sbjct: 668 IDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKTAFYHGNMDAAQRSFVQKQWSKD 727
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD S +LYY D
Sbjct: 728 EINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYSDY 787
Query: 255 RRMEFILSKNQSKNS--------QSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILE 305
R++ ++ + Q++ S + + +R +K+ + +MV Y E CRR L
Sbjct: 788 IRVKHMIIQGQAEQSPWTAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCRRLLQLL 847
Query: 306 SFGEQIPVSLCKNSCDACKHPNLL--------AKYLGELTSAVLQKNHFSQIFI 351
FGE+ C N+CD C L AK L EL L HFS I
Sbjct: 848 HFGEKFDAGNCGNTCDNCSKIKTLVERDVTESAKQLVELVK--LTGQHFSSSHI 899
>gi|317970046|ref|ZP_07971436.1| DNA helicase [Synechococcus sp. CB0205]
Length = 605
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 179/322 (55%), Gaps = 19/322 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+++ L G+ L LLYV+PE + + +L + L L AIDEAHC+S WGHDFR
Sbjct: 102 RVWRQLSDGQ--LDLLYVSPERLLSGDLLERLGSMP----LALFAIDEAHCVSQWGHDFR 155
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR+L L P VP LALTATA P+ Q D+ E L LQ V +SF+RPN+ Y +R+
Sbjct: 156 PEYRQLDQLAQRFPQVPRLALTATADPRTQLDIRERLQLQQGEVFLASFDRPNIRYLLRH 215
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K A L L + IVY R+ D ++ L A G YHAG++ +AR
Sbjct: 216 KQ---SGNAQLLQFLAEHRGESGIVYARSRSRVDRIATELKAAGFDAIGYHAGMDAEARR 272
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
L + VVVAT+AFGMGID+ DVR V H ++PKS+EA+YQE+GRAGRD LP+ +
Sbjct: 273 EALQRFRLGSGVVVVATIAFGMGIDKPDVRFVAHVDLPKSLEAYYQETGRAGRDGLPAVA 332
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
+ +G D ++ + + + Q R ++ Y E SGCRR+ +L
Sbjct: 333 WMAHGGGDIPQLRRFIDDSGASEEQKRIER--------GKLDALIAYSEASGCRRQVLLR 384
Query: 306 SFGEQIPVSLCKNSCDACKHPN 327
FGE++ + C N+CD C P
Sbjct: 385 HFGEEL-LEPC-NNCDGCLEPQ 404
>gi|429218110|ref|YP_007179754.1| ATP-dependent DNA helicase RecQ [Deinococcus peraridilitoris DSM
19664]
gi|429128973|gb|AFZ65988.1| ATP-dependent DNA helicase RecQ [Deinococcus peraridilitoris DSM
19664]
Length = 726
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 137/347 (39%), Positives = 199/347 (57%), Gaps = 24/347 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ E L G+ L+LLYV PE TP F+ L R ++L AIDEAHC+S WGHDFR
Sbjct: 102 EVEEALRHGE--LQLLYVAPERLMTPRFLDLL----DRSEVSLFAIDEAHCVSQWGHDFR 155
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y +L+ L P VP LALTATA +++++E L LQ SSF+RPN+ Y +
Sbjct: 156 PEYLQLAVLAERYPHVPRLALTATADEATRREIVEKLHLQGARQFISSFDRPNIHYRIVE 215
Query: 126 KDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K+ +A L ++A D IVYCL R + +E +A+L+A G+S YHAGL + R
Sbjct: 216 KN---NALRQLLEFIRAEHDGDAGIVYCLSRKSVEESAAWLAAQGVSALPYHAGLGPEVR 272
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ + ++ V+VATVAFGMGID+ +VR V H ++PKS+E +YQE+GRAGRD LPS
Sbjct: 273 ARHQERFLREEGLVMVATVAFGMGIDKPNVRFVAHLDLPKSLEGYYQETGRAGRDGLPST 332
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L+ YG+ D + +L+ + + R +K ++ + E + CRR+ +L
Sbjct: 333 VLMTYGLADVVSVRRMLASSTAPE----PVRRVEGQK----LDALLAFAESAQCRRQVLL 384
Query: 305 ESFGEQIPVSLCKNSCDACKHP----NLLAKYLGELTSAVLQKNHFS 347
FGE++ C N CD C++P + L L++AV N F
Sbjct: 385 RYFGEELSAP-CGN-CDTCQNPCETWDALVAAQKLLSAAVRTGNRFG 429
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/309 (40%), Positives = 186/309 (60%), Gaps = 17/309 (5%)
Query: 19 RLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+L+Y+TPE A + +++++ G L+ + IDEAHC+S WGHDFRP Y+ L +L++
Sbjct: 117 QLIYITPEKFAHSQRLQNEMQRSFQNGKLSRIIIDEAHCVSEWGHDFRPDYKMLGALKSK 176
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
LP V I+ALTATA P+V++D+ L + SFNRPNL YEVR K+ A ++
Sbjct: 177 LPGVQIMALTATATPRVRRDIRNILQINEAYTFMQSFNRPNLRYEVRKKEKKKSA-ENIA 235
Query: 138 SVLKAN--GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ +K N G+T I+YCL + C+E++A + I YHAGL+D+ R D W + +
Sbjct: 236 TFIKENYPGET-GIIYCLSKNRCEEMAAKMQEFKIKALPYHAGLDDQTRKFNQDQWSNDK 294
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
V+VAT+AFGMGI++ DVR V H ++PKSME +YQESGRAGRD S +LYY D+
Sbjct: 295 THVIVATIAFGMGINKPDVRFVIHESLPKSMEGYYQESGRAGRDGKISHCILYYSYSDK- 353
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
++ +++ F +E ++ ++MV+YCE CRR+ L FGE
Sbjct: 354 ----LVHDKMAQD--DFDKKENVR----NNLNKMVEYCETQFTCRRQLQLHYFGENFGPD 403
Query: 315 LCKNSCDAC 323
C +CD C
Sbjct: 404 KCGKTCDNC 412
>gi|402830902|ref|ZP_10879596.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
gi|402283336|gb|EJU31854.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
Length = 729
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 185/306 (60%), Gaps = 21/306 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ED+ +G +LLYV PE + L+ I+ ++ VA+DEAHCIS WGHDFRP
Sbjct: 105 VMEDIRNG--DTKLLYVAPESLTKDEYADFLRTIN----ISFVAVDEAHCISEWGHDFRP 158
Query: 67 SYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
YR + ++ L + +PI+ALTATA KVQ+D++++L + V KSSFNRPNL+YEVR
Sbjct: 159 EYRNIKTIIERLGEGIPIIALTATATTKVQEDILKNLGIPQANVFKSSFNRPNLYYEVRP 218
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K I+YCL R + +EL+ L GI+ YHAGL+ K R+
Sbjct: 219 K--TKNINSDIIRFVKQRPGQSGIIYCLSRKSVEELAQTLQVNGITAIPYHAGLDAKTRA 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ +VVVAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD
Sbjct: 277 KHQDMFLMEEVEVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGRDGGEGYC 336
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E F++SK E+ +++ MV Y E S RRK IL
Sbjct: 337 LAFYCYKDIEKLEKFMVSK---------PIAEQEVGQAL--LQDMVAYAETSSSRRKFIL 385
Query: 305 ESFGEQ 310
FGE+
Sbjct: 386 HYFGEE 391
>gi|389737283|ref|ZP_10190741.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 115]
gi|388436519|gb|EIL93382.1| ATP-dependent DNA helicase RecQ [Rhodanobacter sp. 115]
Length = 604
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 123/309 (39%), Positives = 181/309 (58%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE T F+ L+++ L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 108 LNLLYVAPERLLTSRFLGLLERMEP----ALFAIDEAHCVSQWGHDFRPEYRELTLLHER 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P+ +++++E L LQ+ SSF+RPN+ Y V K + L
Sbjct: 164 FPHVPRIALTATADPRTREEIVERLALQDARQFISSFDRPNIGYRVMLKH---NPRTQLM 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
++ + IVYCL R D+ +A+L+ GI YHAGL+ R+ ++
Sbjct: 221 RFIEEHRGEAGIVYCLSRKKVDDTAAWLAEAGIEALPYHAGLDAATRARHQQRFLREDGV 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+SME +YQE+GRAGRD LP+++ + YG+ D M
Sbjct: 281 VMVATVAFGMGIDKPDVRFVAHLDLPRSMEGYYQETGRAGRDGLPAEAWMVYGLSDVVTM 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E + CRR+ +L +FGE C
Sbjct: 341 SQMIAQSESGDERKRVERQK--------LESLLAYAEATRCRRELLLGAFGEAFH-GPCG 391
Query: 318 NSCDACKHP 326
+ CD C P
Sbjct: 392 H-CDNCVEP 399
>gi|317477615|ref|ZP_07936833.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316906220|gb|EFV27956.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 604
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYAQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L +P + SSF+RPNL V+ + +
Sbjct: 158 QFPQVPIIALTATADKITREDIIKQLHLNHPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 IDFIARHPGESGIIYCMSRSKTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T +I +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINIEKLQRMQQYAESDICRRRILLSYFGE-TATHDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|154506622|ref|ZP_02043079.1| hypothetical protein RUMGNA_03889 [Ruminococcus gnavus ATCC 29149]
gi|153793375|gb|EDN75797.1| ATP-dependent DNA helicase RecQ [Ruminococcus gnavus ATCC 29149]
Length = 763
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 178/309 (57%), Gaps = 16/309 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+++YV PE TP F+ +++V IDEAHCIS WG DFRPSY ++ S L
Sbjct: 119 KIVYVAPERLETPRFLD----FACHAEISMVTIDEAHCISQWGQDFRPSYVRIVSFIRQL 174
Query: 79 PDVPIL-ALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P PI+ A TATA +VQ D+ E L LQNP V + F+R NL++EV+ + +
Sbjct: 175 PVRPIVTAFTATATKRVQTDIREVLKLQNPYVAVTGFDRENLYFEVQRTK---EKKERIR 231
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + D I+YC R DEL +L + G S YHAG+ ++AR S +D+I R Q
Sbjct: 232 EYLEKHSDESGIIYCATRKNVDELYLFLESAGFSVGRYHAGMGNEARKSSQEDFIYDRIQ 291
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V++AT AFGMGID+ +VR V H+N+P+S+E +YQE+GRAGRD PS+ ++YY D
Sbjct: 292 VMIATNAFGMGIDKSNVRYVLHYNMPQSLENYYQEAGRAGRDSEPSECIIYYSPQDVVIN 351
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISD---FSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+F+L +SK + T E + D +M YC +GC R IL FGEQ
Sbjct: 352 QFLL---ESKENYGEYTAEEMQNIQVQDRERLQKMTTYCTTTGCLRNYILGYFGEQAK-E 407
Query: 315 LCKNSCDAC 323
LC N C C
Sbjct: 408 LCGN-CSNC 415
>gi|298209031|ref|YP_003717210.1| ATP-dependent DNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848958|gb|EAP86827.1| putative ATP-dependent DNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 734
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 190/340 (55%), Gaps = 24/340 (7%)
Query: 4 KTKIYE-DLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
KT+I + LD +LLYV PE ++ LK+ ++ +AIDEAHCIS WGH
Sbjct: 99 KTEINQVKLDITNGVTKLLYVAPESLTKDEYVDFLKE----QTISFLAIDEAHCISEWGH 154
Query: 63 DFRPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR L + + D+PI+ LTATA PKVQ+D++++L + N K+SFNRPNL+Y
Sbjct: 155 DFRPEYRNLKKIIKRIGDDIPIIGLTATATPKVQEDILKNLNMSNANTFKASFNRPNLYY 214
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
EVR K + ++D+ +K I+YCL R + +EL+ L GIS YHAGL+
Sbjct: 215 EVRPK--TKEVFSDIIRFIKKRTGKSGIIYCLSRKSVEELAQTLQVNGISAVPYHAGLDA 272
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K R+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 273 KTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGG 332
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCR 299
L +Y D ++E F + + +++ I ++V Y E S R
Sbjct: 333 EGHCLAFYAYKDIEKLE------------KFMSGKPVAEQEIGHALLQEVVAYAETSMSR 380
Query: 300 RKKILESFGEQIPVSLCK--NSCDACKHPNLLAKYLGELT 337
RK +L FGE N D ++P + E+T
Sbjct: 381 RKFLLHYFGESFETETGDGGNMDDNIRNPKTKTEAKDEVT 420
>gi|222086544|ref|YP_002545078.1| ATP-dependent DNA helicase RecQ [Agrobacterium radiobacter K84]
gi|221723992|gb|ACM27148.1| ATP-dependent DNA helicase RecQ [Agrobacterium radiobacter K84]
Length = 626
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 182/323 (56%), Gaps = 25/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
IY + SG +L +LYVTPE T GF +++ +R + L AIDEAHC+S WGHDFRP
Sbjct: 121 IYRAVSSG--TLDMLYVTPERVMTDGF----QQMIARAKIALFAIDEAHCVSQWGHDFRP 174
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L L P VP +ALTATA P + D++E L L + V +SF+RPN+ YE+ +
Sbjct: 175 EYRDLGKLAELFPKVPRIALTATADPHTRDDIIERLGLDDAKVFTTSFDRPNIAYEIVER 234
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D L L + IVYCL R ++ + +L+ G+ AYHAG++ R +
Sbjct: 235 D---QPRQQLLRFLDGHRGDSGIVYCLSRAKVEDTAEWLNGQGVRALAYHAGMDRSVRDA 291
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ +VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS+
Sbjct: 292 NQDAFLKEEDLCLVATVAFGMGIDKPNVRYVAHLDLPGSIEAYYQETGRAGRDGLPSEVW 351
Query: 247 LYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ YGM D R RM ++ + ER+ + ++ CE +GCRR+ I
Sbjct: 352 MAYGMADVIQRGRM-----IDEGNAADEIKRVERAK------LNALLAVCETAGCRRQAI 400
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C N CD C P
Sbjct: 401 LAHFGEG-HAGGCGN-CDTCLKP 421
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 191/325 (58%), Gaps = 11/325 (3%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ DL S P R+LYVTPE ++ + F S L + SR LL IDEAHC+S WGHDF
Sbjct: 867 ELMRDLRSLHPKTRILYVTPEKISLSEAFRSILDWLASRKLLARFVIDEAHCVSQWGHDF 926
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y++LS + P VP++ALTATA +V++DV L + + K SFNRPN+ YEV
Sbjct: 927 RPDYKRLSLCKQRYPSVPLMALTATATREVREDVKVQLGIPRCVTFKQSFNRPNISYEVY 986
Query: 125 YKDLLDDAYADLCSVLKANGDTCA--IVYCLERTTCDELSAYLSAG-GISCAAYHAGLND 181
K + ++ A I+YC + C++++ L I+ YHAGL D
Sbjct: 987 LKGPRSKTVEWIAEFIQNEMPRGASGIIYCFSKQECEDVAKALRRQFRIAAEHYHAGLTD 1046
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
++R +V W+ QV+VAT+AFGMGID+ DVR V H+ +PK++E FYQESGRAGRD
Sbjct: 1047 ESRIAVQQRWMRRATQVIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQESGRAGRDGQ 1106
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRR 300
P++S++ + D+RR+ ++ KN + +++ + ++ + K +M +C + CRR
Sbjct: 1107 PARSIVLFSHADQRRLIGMIDKNSNGLTRAALSLQKDAVK------RMAAWCLDDVSCRR 1160
Query: 301 KKILESFGEQIPVSLCKNSCDACKH 325
+L FGE+ C CD C++
Sbjct: 1161 VTVLAHFGERFDRRACSPPCDNCRN 1185
>gi|50288805|ref|XP_446832.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526141|emb|CAG59763.1| unnamed protein product [Candida glabrata]
Length = 718
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 215/396 (54%), Gaps = 29/396 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELT-ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
KT + L GK L L Y++PE+ + +++++ + L + IDEAHCISSWGH
Sbjct: 183 KTMALQLLSEGK--LNLFYISPEMVMGSSPCKGIIRRLYRQNRLARLVIDEAHCISSWGH 240
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+KL L VP++ALTATA +Q+D+++ L L+N +V K S NR NL+YE
Sbjct: 241 DFRPEYKKLGQLTKEFDGVPVMALTATANDNIQEDILKILNLKNVVVFKDSLNRKNLYYE 300
Query: 123 VRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
V K+ Y + +G + I+YC + +C+++S L+ IS YHAG
Sbjct: 301 VVQKNSRTIEYMTYLLKTEFHGQS-GIIYCNSKASCEKVSKELNQANISSEFYHAGKTAN 359
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
+R + W QVV AT+AFGMGID+++VR V H++IP+SME +YQE+GRAGRD P
Sbjct: 360 SRLNTQRKWQQGTIQVVCATIAFGMGIDKENVRFVFHYDIPRSMEGYYQETGRAGRDGNP 419
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRK 301
SK +L++ + D R++ ++ + Q +E + KK ++ YC CRR
Sbjct: 420 SKCILFFCLQDVNRLQILIQRENVSALQ----KEHNLKK----LQDVLVYCHNKVDCRRL 471
Query: 302 KILESFGEQIPVSLCKNSCDACKHPNL--------------LAKYLGELTSAVLQKNHFS 347
+ILE F E+ S C +CD CK+ + + L +L + + N
Sbjct: 472 QILEYFNEEFFPSNCMKTCDNCKNIGVSTIEQKDFTHYAKQILSLLRKLGNERITTNQCQ 531
Query: 348 QIFISSQDMTDGGQYSEFWNRDDEASGSEEDISDCD 383
IF S +M ++S + N ++ SG + S+ D
Sbjct: 532 DIFRGSNNMKT--RFSGYDNFEEHGSGKDLTKSETD 565
>gi|295133000|ref|YP_003583676.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981015|gb|ADF51480.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 731
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 181/306 (59%), Gaps = 19/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ +G +LLYV PE ++ LK+ ++ +AIDEAHCIS WGHDFR
Sbjct: 104 QVKEDIING--VTKLLYVAPESLTKEDYVDFLKEQK----ISFLAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSL-RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR L + + ++PI+ALTATA PKVQ+D++++L + K+SFNRPNL+YEVR
Sbjct: 158 PEYRNLRQIIKRIGENIPIIALTATATPKVQEDILKNLGIPKAKTFKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD+ +K N I+YCL R +EL+ L GI+ YHAGL+ K R
Sbjct: 218 PK--TKNVDADIIRFVKQNNGKSGIIYCLSRKKVEELAQTLQVNGINAIPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
S D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 SKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E +S + + +E + ++V Y E S RRK IL
Sbjct: 336 CLAFYAYKDIEKLEKFMS------GKPVAEQEVGH----ALLQEVVAYAETSISRRKFIL 385
Query: 305 ESFGEQ 310
FGE+
Sbjct: 386 HYFGEE 391
>gi|95930254|ref|ZP_01312992.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM
684]
gi|95133717|gb|EAT15378.1| ATP-dependent DNA helicase RecQ [Desulfuromonas acetoxidans DSM
684]
Length = 598
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 182/312 (58%), Gaps = 18/312 (5%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
+ L LLYV PE +P F+ +L I + L+A+DEAHC+S WGHDFRP Y +L L
Sbjct: 103 RQQLDLLYVAPERLLSPDFLERLHDIK----IALIAVDEAHCVSQWGHDFRPEYVQLGQL 158
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
R+ PD P++ALTATA + ++D++E L L + SSF+RPN+ Y V K
Sbjct: 159 RDQFPDTPMIALTATADMQTRQDIVERLRLHHARKFISSFDRPNIRYTVVDKQ---KPIV 215
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L L + + IVY L R +E++A L GI AAYHAGL D+ R V + ++
Sbjct: 216 QLEQFLDQHRNEAGIVYALSRKRVEEIAAKLVDRGIVAAAYHAGLPDRQRHEVQEAFLRD 275
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
QVVVATVAFGMGID+ +VR V H+++PK++E++YQE+GRAGRD LP+++LL +G D
Sbjct: 276 DIQVVVATVAFGMGIDKSNVRFVVHYDLPKNIESYYQETGRAGRDGLPAEALLLFGYGDI 335
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
++ K + + + + + MV Y E CRR+ +L FGE +
Sbjct: 336 AIARGLIEKGGNPD---------QVRIELHKLNAMVSYAEPLTCRRRALLGYFGETLDHD 386
Query: 315 LCKNSCDACKHP 326
C N CD C +P
Sbjct: 387 -CGN-CDLCLNP 396
>gi|189466850|ref|ZP_03015635.1| hypothetical protein BACINT_03226 [Bacteroides intestinalis DSM
17393]
gi|189435114|gb|EDV04099.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 602
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 182/311 (58%), Gaps = 21/311 (6%)
Query: 17 SLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
SL+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ +R
Sbjct: 103 SLKLLYISPEKLIAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYAQMGFIR 156
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYAD 135
P++P++ALTATA ++D++ L L P V SSF+RPNL V+ +
Sbjct: 157 EMFPNIPVIALTATADKITREDIVRQLHLNQPKVFISSFDRPNLSLTVKRGYQQKEKSKA 216
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ + + I+YC+ R+ + ++ L G+ A YHAGL+ R DD+I+ R
Sbjct: 217 ILDFIGRHRGESGIIYCMSRSKTETVAQMLQKQGLRVAVYHAGLSSVRRDEAQDDFINDR 276
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
Q+V AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 277 VQIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL- 335
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSL 315
+L+K F+T ++ +M Y E CRR+ +L FGE
Sbjct: 336 ---ILLTK--------FATESGQQGINLEKLQRMQQYAEADVCRRRILLSYFGEATTED- 383
Query: 316 CKNSCDACKHP 326
C N CD CK+P
Sbjct: 384 CGN-CDVCKNP 393
>gi|336434030|ref|ZP_08613835.1| hypothetical protein HMPREF0991_02954 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336014617|gb|EGN44457.1| hypothetical protein HMPREF0991_02954 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 753
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 178/309 (57%), Gaps = 16/309 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+++YV PE TP F+ +++V IDEAHCIS WG DFRPSY ++ S L
Sbjct: 109 KIVYVAPERLETPRFLD----FACHAEISMVTIDEAHCISQWGQDFRPSYVRIVSFIRQL 164
Query: 79 PDVPIL-ALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P PI+ A TATA +VQ D+ E L LQNP V + F+R NL++EV+ + +
Sbjct: 165 PVRPIVTAFTATATKRVQTDIREVLKLQNPYVAVTGFDRENLYFEVQRTK---EKKERIR 221
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+ + D I+YC R DEL +L + G S YHAG+ ++AR S +D+I R Q
Sbjct: 222 EYLEKHSDESGIIYCATRKNVDELYLFLESAGFSVGRYHAGMGNEARKSSQEDFIYDRIQ 281
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V++AT AFGMGID+ +VR V H+N+P+S+E +YQE+GRAGRD PS+ ++YY D
Sbjct: 282 VMIATNAFGMGIDKSNVRYVLHYNMPQSLENYYQEAGRAGRDSEPSECIIYYSPQDVVIN 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISD---FSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+F+L +SK + T E + D +M YC +GC R IL FGEQ
Sbjct: 342 QFLL---ESKENYGEYTAEEMQNIQVQDRERLQKMTTYCTTTGCLRNYILGYFGEQAK-E 397
Query: 315 LCKNSCDAC 323
LC N C C
Sbjct: 398 LCGN-CSNC 405
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 181/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + + L+K++ R L + IDEAHC+S WGHDFRP Y+ L +R+
Sbjct: 831 IELLYITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRD 890
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K + ++
Sbjct: 891 QLPGVPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENI 950
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELS-AYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
++K + + I+YCL R TC+ ++ A S I YHAG++ R+ V + W S
Sbjct: 951 ADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSG 1010
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 1011 RVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDA 1070
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+R +++ + YC + CRR +IL F E
Sbjct: 1071 TSIMSMIDKGEGGKQQ--KNRQRQMLRNV------MQYCLNLADCRRVQILAYFNEYFRP 1122
Query: 314 SLCKNSCDACK 324
C SCD C+
Sbjct: 1123 IDCNKSCDNCR 1133
>gi|398381775|ref|ZP_10539881.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. AP16]
gi|397718856|gb|EJK79437.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. AP16]
Length = 626
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 182/323 (56%), Gaps = 25/323 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
IY + SG +L +LYVTPE T GF +++ +R + L AIDEAHC+S WGHDFRP
Sbjct: 121 IYRAVSSG--TLDMLYVTPERIMTDGF----QQMIARAKIALFAIDEAHCVSQWGHDFRP 174
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYK 126
YR L L P VP +ALTATA P + D++E L L + V +SF+RPN+ YE+ +
Sbjct: 175 EYRDLGKLAELFPKVPRIALTATADPHTRDDIIERLGLDDAKVFTTSFDRPNIAYEIVER 234
Query: 127 DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSS 186
D L L + IVYCL R ++ + +L+ G+ AYHAG++ R +
Sbjct: 235 D---QPRQQLLRFLDGHRGDSGIVYCLSRAKVEDTAEWLNGQGVRALAYHAGMDRSVRDA 291
Query: 187 VLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSL 246
D ++ +VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS+
Sbjct: 292 NQDAFLKEEDLCLVATVAFGMGIDKPNVRYVAHLDLPGSIEAYYQETGRAGRDGLPSEVW 351
Query: 247 LYYGMDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ YGM D R RM ++ + ER+ + ++ CE +GCRR+ I
Sbjct: 352 MAYGMADVIQRGRM-----IDEGNAADEIKRVERAK------LNALLAICETAGCRRQAI 400
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
L FGE C N CD C P
Sbjct: 401 LAHFGEG-HAGGCGN-CDTCLKP 421
>gi|209965714|ref|YP_002298629.1| ATP-dependent DNA helicase RecQ [Rhodospirillum centenum SW]
gi|209959180|gb|ACI99816.1| ATP-dependent DNA helicase RecQ [Rhodospirillum centenum SW]
Length = 610
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 193/343 (56%), Gaps = 22/343 (6%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L LLYV PE TP F+ L+ R + L A+DEAHC+S WGHDFRP Y + S L
Sbjct: 115 GLDLLYVAPERLVTPRFLDLLE----RSRIALFALDEAHCVSQWGHDFRPEYLQCSILHE 170
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
PDVP +ALTATA + + D++E L L V +SF+RPN+ Y V+ KD ++ L
Sbjct: 171 RFPDVPRIALTATADAQTRADIVERLGLGGAEVFAASFDRPNITYRVQTKD--NERRQLL 228
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G+ IVYC+ R + ++ +L GI YHAGL + R + D +I +
Sbjct: 229 DFIRHRHGEDAGIVYCMSRGKVESVAQWLREQGIDALPYHAGLEAETRQANQDRFIKAEG 288
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
V+VATVAFGMGID+ +VR V H + P+S+EA+YQE+GRAGRD LP+++L+ YG D
Sbjct: 289 VVMVATVAFGMGIDKPNVRFVVHMDPPRSLEAYYQETGRAGRDGLPAEALMLYGFQD--- 345
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
++ Q + R + +++ ++ +CE + CRR+ IL FGE+ P C
Sbjct: 346 ---VVQLRQWVEASDAPARHKRTER--QKLEALLGFCETARCRRQTILTYFGEEAP-QPC 399
Query: 317 KNSCDACKHPNLLAKYLGELTSAVLQKNHFSQIFISSQDMTDG 359
N CD C P +A Y G + + + S ++ + Q G
Sbjct: 400 GN-CDTCFTP--VATYDGTVEA----QKALSAVYRTGQRFGVG 435
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 181/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + + L+K++ R L + IDEAHC+S WGHDFRP Y+ L +R+
Sbjct: 831 IELLYITPEMVNKSQALIRSLEKLNRRRRLARIVIDEAHCVSQWGHDFRPDYKALGEVRD 890
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K + ++
Sbjct: 891 QLPGVPMMALTATATENVKVDVIHNLKMEGCEIFTQSFNRPNLTYEVRQKTKSAEVLENI 950
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELS-AYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
++K + + I+YCL R TC+ ++ A S I YHAG++ R+ V + W S
Sbjct: 951 ADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHAGMDSSKRAEVQEWWQSG 1010
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H +IPKS+E +YQE+GRAGRD S LYY D
Sbjct: 1011 RVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSGCYLYYSYRDA 1070
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
+ ++ K + Q R+R +++ + YC + CRR +IL F E
Sbjct: 1071 TSIMSMIDKGEGGKQQ--KNRQRQMLRNV------MQYCLNLADCRRVQILAYFNEYFRP 1122
Query: 314 SLCKNSCDACK 324
C SCD C+
Sbjct: 1123 IDCNKSCDNCR 1133
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELT-ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + L+++++R L + IDEAHC+S WGHDFRP Y++L LR
Sbjct: 355 IELLYITPEMVNKNQTLIRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRA 414
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K ++ A +
Sbjct: 415 QLPGVPMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKKGNELLASI 474
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K++ + IVYCL R TC +++ L I YHAG+ R+ V W +
Sbjct: 475 ADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAG 534
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +YY D
Sbjct: 535 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYRD- 593
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
M + S S+ R+R +++ V +CE S CRR +IL F E
Sbjct: 594 -SMTITRMIDSSDGSKQQKNRQRQMLRNV------VQFCENKSDCRRVQILAYFNEHFRR 646
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 647 EDCNASCDNCK 657
>gi|301106430|ref|XP_002902298.1| bloom syndrome protein [Phytophthora infestans T30-4]
gi|262098918|gb|EEY56970.1| bloom syndrome protein [Phytophthora infestans T30-4]
Length = 1022
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 188/329 (57%), Gaps = 20/329 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFR 65
I +L S + +++LYVTPE A+ G +S L K + RGLL IDEAHCIS WGHDFR
Sbjct: 303 IISELFSNQIRIKMLYVTPEKIASSGMLSNLFKSLEKRGLLARFVIDEAHCISQWGHDFR 362
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
Y L +LR P VPI+ALTATA + + D++++L L+NP + +SSFNRPNL Y+VR
Sbjct: 363 KDYLNLGTLRTKFPSVPIMALTATANSQTEADIVKNLKLRNPFITRSSFNRPNLTYDVRK 422
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL--------SAGGISCAAYHA 177
K +++ ++ + D I+YCL + C++ + L + + YHA
Sbjct: 423 K--TSKFMSEIADFVRKHIDDSGIIYCLSKKDCEQTAEKLIKALGFEHTRKASQISFYHA 480
Query: 178 GLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAG 237
GL R+ +W + +++ ATVAFGMGI++ DVR V H IP+S+ +YQE+GRAG
Sbjct: 481 GLEAGDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAG 540
Query: 238 RDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS- 296
RD + +LYY D R +++K++ N Q + + + +M ++CE
Sbjct: 541 RDGEVANCILYYSFLDLTRRRKLITKDRD-NMQHRNVH-------LQNLRRMTEFCENQV 592
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKH 325
CRR +LE FGE C +CD CK+
Sbjct: 593 ECRRTSLLEYFGEHFSSEQCHGTCDNCKN 621
>gi|404494034|ref|YP_006718140.1| ATP-dependent DNA helicase RecQ [Pelobacter carbinolicus DSM 2380]
gi|77546057|gb|ABA89619.1| ATP-dependent DNA helicase RecQ [Pelobacter carbinolicus DSM 2380]
Length = 596
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 184/321 (57%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ +L +G+ L LLY+ PE +PGF+ +L+ + + L+AIDEAHCIS WGHDFR
Sbjct: 98 QVLAELHAGQ--LDLLYIAPERLMSPGFLERLRDMD----VALIAIDEAHCISQWGHDFR 151
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y +L LR P VP++ALTATA + ++D++ L L + +SF+RPN+ Y V
Sbjct: 152 PEYTQLGVLRRSFPGVPLVALTATADVQTRQDILSRLELDDDDCFVTSFDRPNIRYTVLE 211
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K L L +G IVY L R +E++ L G+S AAYHAGL D R
Sbjct: 212 KH---QPARQLMKFLAGHGSEAGIVYALSRKRVEEVAKKLCDAGLSAAAYHAGLGDGERQ 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V D+++ Q+VVATVAFGMGID+ +VR V H+++PK++E +YQE+GRAGRD L +++
Sbjct: 269 RVQDEFLRDELQIVVATVAFGMGIDKSNVRFVVHYDLPKNIEGYYQETGRAGRDGLAAEA 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL +G D ++ K + E ++ + + M + E CRR+ +L
Sbjct: 329 LLLFGYGDIALCRGLIEKGHN---------EEQNRIELHKLNAMASFAEALTCRRQVLLG 379
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FGE C N CD C P
Sbjct: 380 YFGEH-ATEDCGN-CDICLQP 398
>gi|348680141|gb|EGZ19957.1| hypothetical protein PHYSODRAFT_312852 [Phytophthora sojae]
Length = 1112
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 193/336 (57%), Gaps = 20/336 (5%)
Query: 3 VKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWG 61
V+ I +L S + +++LYVTPE A+ G ++ L + + RGLL IDEAHCIS WG
Sbjct: 387 VQKPIISELFSNRIRIKMLYVTPEKIASSGMLNNLFESLEKRGLLARFVIDEAHCISQWG 446
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFR Y L SLR+ P VPI+ALTATA + + D++++L L+NP + +SSFNRPNL Y
Sbjct: 447 HDFRKDYMTLGSLRSKFPSVPIMALTATANTQTEADIVKNLKLKNPFITRSSFNRPNLTY 506
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYL--------SAGGISCA 173
+VR K ++ ++ + D I+YCL + C++ + L + +
Sbjct: 507 DVRKK--TSKFMTEIADYVRKHIDDSGIIYCLSKKDCEQTADKLIKALGFEHTRKASQIS 564
Query: 174 AYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQES 233
YHAGL + R+ +W + +++ ATVAFGMGI++ DVR V H IP+S+ +YQE+
Sbjct: 565 FYHAGLEPEDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEA 624
Query: 234 GRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC 293
GRAGRD + +LYY D R +++K++ N Q + + + +M ++C
Sbjct: 625 GRAGRDGEVANCILYYSFLDLTRRRKLITKDRD-NMQHRNVH-------LQNLRRMTEFC 676
Query: 294 EGS-GCRRKKILESFGEQIPVSLCKNSCDACKHPNL 328
E CRR +LE FGE C+ +CD CK+ L
Sbjct: 677 ENQVECRRTSLLEYFGEHFSSDQCRGTCDNCKNKAL 712
>gi|255690250|ref|ZP_05413925.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|260624270|gb|EEX47141.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
Length = 601
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D++ L L P SSF+RPN+ V+ + +
Sbjct: 158 QFPQVPIIALTATADKITREDIIRQLHLIRPRTFISSFDRPNISLTVKRGFQTKEKNKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++ +G I+YC+ R + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 218 IEFIQRHGKESGIIYCMSRNKTETVAQTLLKQGIRCGVYHAGLSAQQRDETQNDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K S++SQ K ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTKFASESSQ--------QKINLEKLQRMQQYAEADICRRRILLSYFGE-TATEDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|408491728|ref|YP_006868097.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
gi|408469003|gb|AFU69347.1| ATP-dependent DNA helicase RecQ [Psychroflexus torquis ATCC 700755]
Length = 728
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 184/310 (59%), Gaps = 20/310 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
QVK ++ ED+ SG +L+YV PE ++ LK + ++ +AIDEAHCIS WG
Sbjct: 99 QVK-QVKEDISSG--ITKLVYVAPESLTKTEYIEFLKGEN----ISFLAIDEAHCISEWG 151
Query: 62 HDFRPSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
HDFRP YR L ++ + ++PI+ LTATA PKVQ+D++++L + N K SFNRPNL+
Sbjct: 152 HDFRPEYRNLKNIIERIGENIPIIGLTATATPKVQEDILKNLRIPNSKTFKDSFNRPNLY 211
Query: 121 YEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
YE+R K DD +D+ +K N I+YCL R ++LS L G+ YHAGL+
Sbjct: 212 YEIRPK--TDDVDSDIIKFVKKNSGKSGIIYCLSRKRVEQLSQALQVNGVKAVPYHAGLD 269
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
K+RS D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 270 AKSRSRHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHNDIPKSIESYYQETGRAGRDG 329
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
+ YY D ++E +S + + +E + +V + E S RR
Sbjct: 330 GEGHCVAYYNHKDIEKLEKFMS------GKPIAEQEIGH----ALLQDVVAFAESSISRR 379
Query: 301 KKILESFGEQ 310
K IL FGE+
Sbjct: 380 KYILHYFGEE 389
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 192/356 (53%), Gaps = 44/356 (12%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +++++L++ S++LLYVTPE + F L IH RG L + +DEAH IS WGHD
Sbjct: 367 RKRVFQELNNINCSIKLLYVTPERFSGSDFQEILVNIHDRGQLKRLIVDEAHSISEWGHD 426
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRPSYR+LS R P +PI+ALTATA +V+KD+ SL +++ + ++SSF R NL Y+V
Sbjct: 427 FRPSYRRLSLFRKQFPGLPIVALTATATDRVEKDIKSSLQMRSIVNIRSSFMRSNLIYQV 486
Query: 124 RYK-----DLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
R K +L D YA + K I+YC C+ +S YLS+ G+ YHA
Sbjct: 487 RLKSQDSQSVLTDIYA---YISKKYPKESGIIYCATTKDCEIISEYLSSRGLDTCFYHAS 543
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L R + +DW R +VV T+AFGMGID+ + R V H IP+S+EA+YQ++GRAGR
Sbjct: 544 LKPSQRIQLQNDWTEGRFKVVCTTIAFGMGIDKSNTRFVIHHTIPQSIEAYYQQTGRAGR 603
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD------------- 285
D S +LYY + + IL K NS R + SK+ D
Sbjct: 604 DGQTSDCILYYS-----KFDLILLKKLMANSDK---RTKLSKEPFQDEVYPDETDEDPEE 655
Query: 286 ------------FSQMVDYCEGSG-CRRKKILESFGEQIPVSLCKNSCDACKHPNL 328
MV +C + CRR +L+ F EQ CK +CD C P+L
Sbjct: 656 ILKQLQANKNDMLDNMVSFCVNTKECRRVSLLKYFSEQ--SKPCKTNCDNCISPHL 709
>gi|336406152|ref|ZP_08586813.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|423216120|ref|ZP_17202645.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295085102|emb|CBK66625.1| ATP-dependent DNA helicase, RecQ-like [Bacteroides xylanisolvens
XB1A]
gi|335935401|gb|EGM97353.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|392690971|gb|EIY84222.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 602
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 179/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 158 QFPQIPIVALTATADKITREDIVRQLHLNHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G+ I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 218 LEFIHRHGEESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|229496706|ref|ZP_04390420.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
gi|229316603|gb|EEN82522.1| ATP-dependent DNA helicase RecQ [Porphyromonas endodontalis ATCC
35406]
Length = 724
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 178/305 (58%), Gaps = 17/305 (5%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYVTPE + L+ I ++ AIDEAHCIS WGHDFRP YRK+ + + +
Sbjct: 112 KLLYVTPECLTKEENQAFLQSIS----ISFFAIDEAHCISEWGHDFRPEYRKIRPMIDVI 167
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
PI+ALTATA PKV+ D++ +L + + +SSFNRPNLFY + K+ +D ++
Sbjct: 168 GRRPIIALTATATPKVEHDILRTLQIPQAHIFRSSFNRPNLFYSILPKN--EDVDRNIVR 225
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
+ +N IVYC+ R+ + L GI YHAGL+ + R++ D ++S QV
Sbjct: 226 FVLSNPQKSGIVYCMSRSKVTTFAKILRINGIRALPYHAGLDAQERAANQDAFLSEECQV 285
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT+AFGMGID+ DVR V H+++PKS+E +YQE+GRAGRD + YY D +R+E
Sbjct: 286 IVATIAFGMGIDKPDVRFVIHYDMPKSLEGYYQETGRAGRDGGEGVCIAYYSQSDMQRLE 345
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
K Q S ER K + ++ +Y E + CRRK +L FGE+ C N
Sbjct: 346 --------KFMQDKSNSEREIGKQL--LAETSNYAESALCRRKLLLHYFGEEYREENCGN 395
Query: 319 SCDAC 323
CD C
Sbjct: 396 -CDNC 399
>gi|171688896|ref|XP_001909388.1| hypothetical protein [Podospora anserina S mat+]
gi|170944410|emb|CAP70520.1| unnamed protein product [Podospora anserina S mat+]
Length = 483
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 187/347 (53%), Gaps = 27/347 (7%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ I +DL +G P RLLYVTPEL + P F +L+ +H + L +A+DEAHCIS WGHD
Sbjct: 103 RDHIMKDLGTGHPLTRLLYVTPELCSGPYFRERLELVHRQKELARIAVDEAHCISEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNP--LVLKSSFNRPNLFY 121
FR +++LS R PDVPI+ LTATA +V+ D++ +L + P S RPNL
Sbjct: 163 FRKDFKRLSWFRERFPDVPIMCLTATANEQVRNDILTTLGINGPNLKAFTMSAFRPNLHL 222
Query: 122 EVRY-KDLLDDAYADLCSVLKA--------------------NGDTCAIVYCLERTTCDE 160
EVR+ D DD Y D S LK + I+Y R C+
Sbjct: 223 EVRFTSDQTDDRYDDFVSWLKGVYERRGKPDRKPELDEMGERVENVSGIIYTTSRDECES 282
Query: 161 LSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR--KQVVVATVAFGMGIDRKDVRLVC 218
L+A L + I+ +HA L ++ + L WI + ++VAT AFGMGID+ DVR V
Sbjct: 283 LAASLRSHDIAARPFHAKLANQDKERTLQKWIRNEVGYDIIVATTAFGMGIDKDDVRFVV 342
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERS 278
H+ +PKS E +YQE+GRAGRD S LYY +DR R+ ++ K+ + + E +
Sbjct: 343 HWRLPKSFEGYYQEAGRAGRDGKASYCFLYYSREDRDRVCGMIVKDNTSGDRRDKGGEAN 402
Query: 279 SKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSLCKNSCDACK 324
+ + +V YCE + GCR I + FGE+ V C +CD K
Sbjct: 403 KRARMESHEALVRYCEDTGGCRHAAITKYFGEK-EVPKCDFACDWHK 448
>gi|302805332|ref|XP_002984417.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
gi|300147805|gb|EFJ14467.1| hypothetical protein SELMODRAFT_234552 [Selaginella moellendorffii]
Length = 605
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 185/318 (58%), Gaps = 15/318 (4%)
Query: 7 IYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+ ++L +PS +LLYVTPE L + F L + LL IDEAHC+S WGHDFR
Sbjct: 285 VMQELRKQRPSCKLLYVTPEKLAKSASFQDVLHGLDRHRLLARFVIDEAHCVSQWGHDFR 344
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P VP++ALTATA V+KD++ L + + V+++SF+RPNL Y+V
Sbjct: 345 PDYKALGILKQQFPRVPLMALTATATHSVRKDILSILRIPHATVIETSFDRPNLKYKVVI 404
Query: 126 KDLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKA 183
KD D L ++K + C IVYCL + C ++ YLS I A YHAGL+++
Sbjct: 405 KD-PKDPLEQLGKIIKDDFARQCGIVYCLSKNECKDVCDYLSNKCKIKTAFYHAGLSNRE 463
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R V + W + QV+ AT+AFGMGID+ DVR V H + K++E +YQESGRAGRD L S
Sbjct: 464 RVLVQNKWQKNEVQVICATIAFGMGIDKADVRFVIHNTMSKAIEGYYQESGRAGRDGLSS 523
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKK 302
L+ Y D R+ +L ++ SF K+ + +M +YCE CRRK
Sbjct: 524 TCLVLYQKKDFSRIACMLRSGYGRSKDSF-------KRGVEQGRKMQEYCEEKNQCRRKL 576
Query: 303 ILESFGEQIPVSLCKNSC 320
+LE FGE S+ +N C
Sbjct: 577 LLEYFGEN---SMSQNGC 591
>gi|336263768|ref|XP_003346663.1| hypothetical protein SMAC_04096 [Sordaria macrospora k-hell]
gi|380091369|emb|CCC10865.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 463
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/397 (36%), Positives = 215/397 (54%), Gaps = 44/397 (11%)
Query: 1 MQVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSW 60
M + IY DL +G P RLLYVTPEL + F KLK ++ + L + +DEAHCIS W
Sbjct: 80 MPERDYIYADLATGHPLTRLLYVTPELCSGDHFRRKLKLVYEQRELARIVVDEAHCISEW 139
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLK---SSFNR 116
GHDFR +++LS R P+VP++ LTATA +V++DV+ +L L + P LK + +R
Sbjct: 140 GHDFRKDFKRLSWFRETFPNVPVMCLTATANDQVRRDVLTTLGLGKTPGKLKIFSMTAHR 199
Query: 117 PNLFYEVRYK-DLLDDAYADLCSVLKANGDTCA--------------------IVYCLER 155
PNL EVRY D +D Y D + L+ D A I+Y + R
Sbjct: 200 PNLHLEVRYTSDEANDRYDDFVTWLQGVYDRRAAADRKAELDVTGERVENVSGIIYTISR 259
Query: 156 TTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKD 213
+ L+A L GI +HA L+++ + L WI++ ++VAT AFGMGID+++
Sbjct: 260 DEVESLAAALRHDGIGARPFHAKLSNQTKEETLAKWIANEPGYDIIVATTAFGMGIDKEN 319
Query: 214 VRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM-EFILSKNQSKNSQSF 272
VR V H+ +PKS E +YQE+GRAGRD S LYY +DR R+ + + SK++ +
Sbjct: 320 VRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDRDRVCNLVAREPVSKHAGAN 379
Query: 273 STRERSSKKSISDFSQMVDYCE-GSGCRRKKILESFGE-QIPVSLCKNSCDACKHPNLLA 330
+ +++ S++V YCE S CR I FGE Q+P C +CD K P L
Sbjct: 380 GINNKQARQ--ESLSRLVAYCEDTSSCRHAAICRYFGETQVPE--CDYACDWHKDPQGLK 435
Query: 331 KYLGELTSAVLQKNHFSQIFISSQDMTDGGQYSEFWN 367
+ + + S+ +IS+Q + G Y E+W+
Sbjct: 436 RRMA--------RGLASEEWISTQ--REEGMYDEYWS 462
>gi|224540740|ref|ZP_03681279.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517639|gb|EEF86744.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
Length = 602
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ +R
Sbjct: 104 LKLLYISPEKLIAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYAQMGFIRE 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA ++D++ L L P V SSF+RPNL V+ + +
Sbjct: 158 MFPNIPVIALTATADKITREDIVRQLHLNQPKVFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L G+ A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIDRHRGESGIIYCMSRSKTETVAQMLQKQGLRVAVYHAGLSSARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
Q+V AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 278 QIVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATESGQQGINLEKLQRMQQYAEADVCRRRILLSYFGEATTED-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 177/316 (56%), Gaps = 12/316 (3%)
Query: 12 DSGKPSLRLLYVTPELT-ATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRK 70
DS ++LLYVTPE+ F+ + +HSR LL + IDEAHC+S WGHDFRP Y+
Sbjct: 923 DSPHDFVQLLYVTPEMVNQNQTFVRAFEGLHSRCLLARIVIDEAHCVSQWGHDFRPDYKA 982
Query: 71 LSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD 130
L R+ VP++ALTATA V+ DVM+ L ++N V SFNRPNL YEVR K
Sbjct: 983 LGEFRSRFNAVPVMALTATATENVKFDVMQVLGMENCEVFTQSFNRPNLTYEVRPKGKGR 1042
Query: 131 DAYADLCSVLKANGDTCA-IVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVL 188
+ ++K+ D A IVYCL R C+ ++ L I YHAG+ R +
Sbjct: 1043 AVLDSIADLIKSTYDGQAGIVYCLSRKNCESVATQLRKEYHIEAQHYHAGIPSGKRIEIQ 1102
Query: 189 DDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLY 248
W V+VAT+AFGMGID+ DVR V H IPKS+E +YQE+GRAGRD S LY
Sbjct: 1103 QKWQEGEFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGNQSGCYLY 1162
Query: 249 YGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESF 307
YG D ++ ++ S +++ +K + +V +CE S CRR ++L+ F
Sbjct: 1163 YGYGDTASLKHMIENGDG------SPQQKEHQKQL--LRNVVQFCENRSDCRRLQVLDYF 1214
Query: 308 GEQIPVSLCKNSCDAC 323
E+ C+N CD C
Sbjct: 1215 NERFDPRDCRNGCDNC 1230
>gi|298480716|ref|ZP_06998912.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273150|gb|EFI14715.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 621
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 179/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 123 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 176
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 177 QFPQIPIVALTATADKITREDIVRQLHLNHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 236
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G+ I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 237 LEFIHRHGEESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 296
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 297 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL-- 354
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 355 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 403
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 404 GN-CDVCKNP 412
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 181/311 (58%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ +++ L+++++R L + IDEAHC+S WGHDFRP Y++L LR
Sbjct: 452 IELLYITPEMVNKNQTLTRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRA 511
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K ++ A +
Sbjct: 512 QLPGVPMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKKGNELLASI 571
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K++ + IVYCL R TC +++ L I YHAG+ R+ V W +
Sbjct: 572 ADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAG 631
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +YY D
Sbjct: 632 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYRD- 690
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
M + S S+ R+R +++ V +CE S CRR +IL F E
Sbjct: 691 -SMTITRMIDSSDGSKQQKNRQRQMLRNV------VQFCENKSDCRRVQILAYFNEHFRR 743
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 744 EDCNASCDNCK 754
>gi|167763147|ref|ZP_02435274.1| hypothetical protein BACSTE_01517 [Bacteroides stercoris ATCC
43183]
gi|167698441|gb|EDS15020.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 604
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYAQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D++ L L +P SSF+RPNL V+ + +
Sbjct: 158 QFPHVPIIALTATADKITREDIIRQLHLNHPRTFISSFDRPNLSLTVKRGYQQKEKSKTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKTESVAQMLQKHGIRTAVYHAGLSPSLRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE I C
Sbjct: 336 --ILLTK--------FATESGQQNINLEKLQRMQQYAESDICRRRILLSYFGE-IADHDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|409438430|ref|ZP_11265509.1| ATP-dependent DNA helicase [Rhizobium mesoamericanum STM3625]
gi|408749981|emb|CCM76682.1| ATP-dependent DNA helicase [Rhizobium mesoamericanum STM3625]
Length = 618
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/319 (41%), Positives = 182/319 (57%), Gaps = 25/319 (7%)
Query: 11 LDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRK 70
+ +GK L LLYVTPE GF + ++L+AIDEAHC+S WGHDFRP YR+
Sbjct: 119 ISAGK--LDLLYVTPERILLDGFRDTIGNAR----ISLLAIDEAHCVSQWGHDFRPEYRE 172
Query: 71 LSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD 130
L L + P VP +ALTATA P + D++E L L+N V +SF+RPN+ YE+ +D
Sbjct: 173 LGRLAEHYPGVPRMALTATADPHTRDDIVERLALKNARVFTTSFDRPNISYEIVERD--- 229
Query: 131 DAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDD 190
L L + IVYCL R ++ + +L+ GI YHAG++ R + D
Sbjct: 230 QPRQQLLRFLSGHKGNSGIVYCLSRAKVEDTAEWLNGQGIRALPYHAGMDRALRDANQDA 289
Query: 191 WISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYG 250
++ + +VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS+ + YG
Sbjct: 290 FLKEDELCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMTYG 349
Query: 251 MDD---RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESF 307
M D RRRM ++ ++ ERS + ++ CE + CRR+ IL F
Sbjct: 350 MADVIQRRRM-----IDEGGAAEEIKRVERSK------LNALLAICETASCRRQAILAHF 398
Query: 308 GEQIPVSLCKNSCDACKHP 326
GE + V C CD C P
Sbjct: 399 GE-VHVGNC-GGCDTCLKP 415
>gi|254504232|ref|ZP_05116383.1| ATP-dependent DNA helicase RecQ [Labrenzia alexandrii DFL-11]
gi|222440303|gb|EEE46982.1| ATP-dependent DNA helicase RecQ [Labrenzia alexandrii DFL-11]
Length = 629
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/310 (42%), Positives = 181/310 (58%), Gaps = 23/310 (7%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
LLYVTPE ++ F L + + L AIDEAHC+S WGHDFRP Y LS+L P
Sbjct: 134 LLYVTPERLSSESFRKLLDTLD----IALFAIDEAHCVSQWGHDFRPEYLSLSTLAERYP 189
Query: 80 DVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSV 139
VP +ALTATA P QKD+ L L V +SF+RPN+ YE+ ++ + L
Sbjct: 190 GVPRVALTATADPHTQKDIQARLKLDEAEVFSTSFDRPNIRYEIVERN---NQRQQLLDF 246
Query: 140 LKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVV 199
LK + C IVYCL R ++++ +L+A GI YHAGL + R++ D ++ +
Sbjct: 247 LKKHKGECGIVYCLSRAKVEDIAEWLNAKGIRALPYHAGLPAEQRAANQDAFLLEEDLCL 306
Query: 200 VATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---RRR 256
VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD PS++ + YGM D RRR
Sbjct: 307 VATVAFGMGIDKPDVRYVAHLDLPSSVEAYYQETGRAGRDGAPSEAFMAYGMADLVQRRR 366
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
M +++ + + R ++K + ++ CE +GCRR+ +L FGE P C
Sbjct: 367 M---IAEGDAPDE---VKRAENAK-----LNALLGICETAGCRRQALLAHFGETYP-EPC 414
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 415 GN-CDTCLSP 423
>gi|403364021|gb|EJY81760.1| ATP-dependent DNA helicase, RecQ family protein [Oxytricha
trifallax]
Length = 923
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/325 (38%), Positives = 189/325 (58%), Gaps = 13/325 (4%)
Query: 6 KIYEDL-DSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ Y DL + P ++L+Y+TPE L T F++ L K++ + IDE HC+S WG D
Sbjct: 430 QFYTDLLANSDPLMKLIYLTPEKLVQTKPFINILDKLYQDNRIARFVIDEVHCVSHWGQD 489
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FR YR+L LR P VP++ LTATA V+ D+++ L L N + +SSFNRPNL YE+
Sbjct: 490 FRKDYRELQILRMRYPTVPMIVLTATATIAVKYDIVKHLKLDNIVFFQSSFNRPNLLYEI 549
Query: 124 RYKDLLDDAYA-DLCSVLKANGDT--CAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
R K + A D+ +L+ I+YCL RT C+EL LS + C YHA +N
Sbjct: 550 RDKAKIKKNIAEDIIMLLRDRKYVYQSGIIYCLSRTECEELCRELSEFDVKCDYYHAKMN 609
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
+ R + W+ + +++AT+AFG+GI+++DVR V H IPKS+E + QE GRAGRD
Sbjct: 610 ENERRIIQQRWMRNEIHIIIATIAFGLGINKRDVRFVIHTTIPKSLENYAQECGRAGRDG 669
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CR 299
+ +LYY DR+R+EF + N+++ + R+ +++ +++++CE CR
Sbjct: 670 ENANCILYYSYADRKRLEFFI----ISNTENTAGRK---NENLHALYKILEFCEEPYLCR 722
Query: 300 RKKILESFGEQIPVSLCKNSCDACK 324
RK +L GE C N CD C+
Sbjct: 723 RKILLNYLGEDFKSKKCNNMCDNCR 747
>gi|389775051|ref|ZP_10193137.1| ATP-dependent DNA helicase RecQ [Rhodanobacter spathiphylli B39]
gi|388437716|gb|EIL94498.1| ATP-dependent DNA helicase RecQ [Rhodanobacter spathiphylli B39]
Length = 608
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 182/309 (58%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE T F+ L++ + L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 107 LNLLYVAPERLLTSRFLDLLERTE----VALFAIDEAHCVSQWGHDFRPEYRELAILHQR 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP +ALTATA P+ +++++E L LQ+ SSF+RPN+ Y V + +A L
Sbjct: 163 FPEVPRIALTATADPRTREEIVERLSLQDARQFVSSFDRPNIGYRVGQRH---NAKRQLG 219
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + IVYCL R D+ +A+L+ GI YHAGL+ R+ ++
Sbjct: 220 EFLLGHEGESGIVYCLSRRKVDDTAAWLAESGIEALPYHAGLDAATRAKNQQRFLREDGV 279
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+VATVAFGMGID+ DVR V H ++P+S+E +YQE+GRAGRD LP+++ + YG+ D M
Sbjct: 280 VMVATVAFGMGIDKPDVRFVAHLDLPRSIEGYYQETGRAGRDGLPAEAWMIYGLSDVVTM 339
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++++++S + + R++ ++ Y E CRR+ +L +FGE P C
Sbjct: 340 SQMIAQSESADERKRVERQK--------LESLLAYAEAIDCRRQLLLGAFGESYP-GPCG 390
Query: 318 NSCDACKHP 326
+ CD C P
Sbjct: 391 H-CDNCIAP 398
>gi|317479553|ref|ZP_07938681.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|316904283|gb|EFV26109.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
Length = 603
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L P + SSF+RPNL V+ + +
Sbjct: 158 LFPQVPIIALTATADKITREDIIKQLHLNQPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINLEKLQRMQQYAEADICRRRILLSYFGENTTCD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 183/313 (58%), Gaps = 16/313 (5%)
Query: 18 LRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLYVTPE+ + + F L+ ++ + L + IDEAHC+S WGHDFRP Y+ L +R
Sbjct: 1037 LQLLYVTPEMVSKSSQFCQGLETLYRKKKLARLVIDEAHCVSQWGHDFRPDYKALGEVRR 1096
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA P V D+ +L + V SFNRPNL+YE+R K A ++
Sbjct: 1097 RFPSVPVMALTATATPNVIVDIKHNLSIDGCKVFSQSFNRPNLYYEIREKG--KGAVENI 1154
Query: 137 CSVLKA--NGDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWIS 193
++++ +G T IVY L + + ++ L GIS YHAG+ ++ + DW
Sbjct: 1155 AELIQSQYSGQT-GIVYTLSQKSTVSIADKLRDKFGISAHHYHAGIPADEKTRIQRDWQK 1213
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
R ++VVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD + S LY+ D
Sbjct: 1214 GRIKIVVATIAFGMGIDKPDVRFVIHHYLPKSLEGYYQETGRAGRDGIHSDCFLYFSYGD 1273
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIP 312
+ + ++ ++ +Q RE ++MVD+CE CRR +IL FGE
Sbjct: 1274 IKNLRKFIADSEGSEAQKARQREM--------LNRMVDFCENKRDCRRSEILRYFGENFE 1325
Query: 313 VSLCKNSCDACKH 325
S C +CD CK+
Sbjct: 1326 QSGCGGTCDNCKY 1338
>gi|258542352|ref|YP_003187785.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01]
gi|384042273|ref|YP_005481017.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-12]
gi|384050790|ref|YP_005477853.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-03]
gi|384053898|ref|YP_005486992.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-07]
gi|384057132|ref|YP_005489799.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-22]
gi|384059773|ref|YP_005498901.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-26]
gi|384063065|ref|YP_005483707.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-32]
gi|384119141|ref|YP_005501765.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01-42C]
gi|421849726|ref|ZP_16282701.1| DNA helicase RecQ [Acetobacter pasteurianus NBRC 101655]
gi|256633430|dbj|BAH99405.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01]
gi|256636489|dbj|BAI02458.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-03]
gi|256639542|dbj|BAI05504.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-07]
gi|256642598|dbj|BAI08553.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-22]
gi|256645653|dbj|BAI11601.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-26]
gi|256648706|dbj|BAI14647.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-32]
gi|256651759|dbj|BAI17693.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654750|dbj|BAI20677.1| DNA helicase RecQ [Acetobacter pasteurianus IFO 3283-12]
gi|371459457|dbj|GAB27904.1| DNA helicase RecQ [Acetobacter pasteurianus NBRC 101655]
Length = 626
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 190/324 (58%), Gaps = 19/324 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI DL +G+ + LLY++PE + G + +L +I L+++AIDEAHCIS+WGH+F
Sbjct: 120 AKIRSDLANGR--IDLLYISPERLLSSGTLDRLVRIP----LSVIAIDEAHCISAWGHEF 173
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR L++L + P VP +ALTATA + ++D++ +L + + VL SSF+RPNL V+
Sbjct: 174 RPEYRALTALPRHFPHVPRIALTATADERTREDILAALDMPHAEVLVSSFHRPNLNISVQ 233
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L + L+ + D +IVYC R + ++ L G AYHAGL+ +
Sbjct: 234 PKA---SETRQLITALERHKDAASIVYCGSRARTERMATSLRERGWPALAYHAGLSPIEK 290
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ L + S V+VAT+AFGMGIDR DVR V H ++P S EA+YQ+ GRAGRD LPS
Sbjct: 291 RAALLRFRSGEPLVIVATIAFGMGIDRPDVRAVVHLDMPASPEAYYQQIGRAGRDGLPSD 350
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+LL YG +D R + L ++ + S+ R R M+ E +GCR + +L
Sbjct: 351 TLLLYGGEDMARARYWLDQSAAPESEKRIMRSR--------LEAMIALTETTGCRTRALL 402
Query: 305 ESFGEQIPVSLCKNSCDACKHPNL 328
FGE++ C + CD C HP L
Sbjct: 403 HCFGEEL-AEPCGH-CDNCLHPVL 424
>gi|423305643|ref|ZP_17283642.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423309812|ref|ZP_17287802.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|392680875|gb|EIY74239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392683916|gb|EIY77249.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 603
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L P + SSF+RPNL V+ + +
Sbjct: 158 LFPQVPIIALTATADKITREDIIKQLHLNQPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINLEKLQRMQQYAEADICRRRILLSYFGENTTCD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|160886583|ref|ZP_02067586.1| hypothetical protein BACOVA_04594 [Bacteroides ovatus ATCC 8483]
gi|423289735|ref|ZP_17268585.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|156108468|gb|EDO10213.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
gi|392667446|gb|EIY60956.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 608
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 110 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 163
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P + SSF+RPN+ V+ + +
Sbjct: 164 QFPQIPIVALTATADKITREDIVRQLHLNHPRIFISSFDRPNISLTVKRGFQAKEKNKAI 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 224 LEFIHRHGGESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 284 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL-- 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K S+++Q E+ +M Y E CRR+ +L FGE C
Sbjct: 342 --ILLTKFASESNQQSINLEK--------LQRMQQYAEADICRRRILLSYFGETTTED-C 390
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 391 GN-CDVCKNP 399
>gi|423283377|ref|ZP_17262261.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|404581095|gb|EKA85801.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 601
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 181/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 104 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 159 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAIV 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R+ DD+I+ R +
Sbjct: 219 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIE 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 336 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 129/309 (41%), Positives = 181/309 (58%), Gaps = 14/309 (4%)
Query: 20 LLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
L+YVTPE+ A F L+ +H R L IDEAHCISSWG DFRP Y++L S++
Sbjct: 596 LIYVTPEMIAKSTLFKDVLRNLHRRQRLARFVIDEAHCISSWGFDFRPDYKELGSIKREY 655
Query: 79 PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
P VPI+ALTATA +V++DV+ SL + + LVL SFNRPNL YEVR K L D+
Sbjct: 656 PGVPIMALTATANERVKQDVITSLGINDCLVLSQSFNRPNLRYEVRPKGKL--IIKDISD 713
Query: 139 VLKAN-GDTCAIVYCLERTTCDELSAYL-SAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++K + C I+YCL + C++++ L + G+ YHAG+ R + DW +
Sbjct: 714 LIKRDFAGLCGIIYCLSKKQCEDIAEALKTQHGVKAHHYHAGMAKDDRIRIQADWQRGKI 773
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
VV AT+AFGMGID+ +VR V HF I S+EA+YQE+GRAGRD S +LY+ +D R
Sbjct: 774 HVVCATIAFGMGIDKANVRFVLHFTISGSLEAYYQETGRAGRDGGDSVCILYFNFNDTRL 833
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVSL 315
+ ++ + + Q R+R+ MV Y + CRR ++L+ FGE
Sbjct: 834 LYRLIDTGEGSHEQ--KQRQRAH------VQDMVKYAFNTIDCRRTQVLQYFGETFAREQ 885
Query: 316 CKNSCDACK 324
C +CD C+
Sbjct: 886 CHATCDNCR 894
>gi|393788520|ref|ZP_10376647.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392654200|gb|EIY47848.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 601
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY++PE ++++ + L+L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 IKLLYISPE-----KLITEVDYLLRDMNLSLFAIDEAHCISQWGHDFRPEYAQMGILHQM 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VPI+ALTATA + D++ L L +P + SSF+RPNL V+ + +
Sbjct: 159 FPKVPIIALTATADKITRGDIIRQLHLTDPKIFISSFDRPNLSLTVKRGYQQKEKSKAIL 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + D I+YC+ R+ + ++ L GI C YHAGL+ R + DD+I+ R Q
Sbjct: 219 EFIDRHADESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSAYQRDNTQDDFINDRIQ 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTVLFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T + ++ +M Y E CRR+ +L FGE+ C
Sbjct: 336 -ILLTK--------FATESKQQTINLEKLQRMQQYAEADICRRRILLSYFGEKSEED-CG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|218130244|ref|ZP_03459048.1| hypothetical protein BACEGG_01832 [Bacteroides eggerthii DSM 20697]
gi|217987528|gb|EEC53856.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 604
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 181/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----VSLFAIDEAHCISQWGHDFRPEYAQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA ++D+++ L L +P + SSF+RPNL V+ + +
Sbjct: 158 QFPQVPVIALTATADKITREDIIKQLHLNHPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 IDFIARHPGESGIIYCMSRSKTESVAQMLQKQGIRAAVYHAGLSPTRRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLSDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T +I +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINIEKLQRMQQYAESDICRRRILLSYFGE-TATHDC 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|62858709|ref|NP_001016316.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|89266858|emb|CAJ83846.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|213624210|gb|AAI70790.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
Length = 558
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/321 (40%), Positives = 177/321 (55%), Gaps = 19/321 (5%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPG-FMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ++ + L+LLYVTPE A FMS+L+K + GLL VA+DE HC S WGHDFR
Sbjct: 175 VHGEMTNKNSRLKLLYVTPEKIAKSKLFMSRLEKAYQAGLLARVAVDEVHCCSQWGHDFR 234
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ P+ P++ LTATA V KD + LC+ PL +SFNRPNLFYEVR
Sbjct: 235 PDYKTLGILKRQFPNSPLIGLTATATTHVLKDAQKILCVPKPLTFTASFNRPNLFYEVRL 294
Query: 126 K-DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
K D AD+ ++ + I+YC + + ++ L GI YHA + +
Sbjct: 295 KPSSSQDFIADIVKLINSRYRGQSGIIYCFSQKDSEHVTMSLQKLGIRAGTYHANMEPRD 354
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
++ V W ++ Q+VVATVAFGMGID+ DVR V H ++ KSME +YQESGRAGRD +
Sbjct: 355 KTKVHTKWTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDARA 414
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKK 302
+LYYG D R+ S E +K + + MV YC+ CRR
Sbjct: 415 DCILYYGFGDIFRIS------------SMVVMENVGQKKLYE---MVGYCQSPDRCRRVL 459
Query: 303 ILESFGEQIPVSLCKNSCDAC 323
I + F E + C CD C
Sbjct: 460 IAQHFDEVWDSAKCNKMCDNC 480
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 179/311 (57%), Gaps = 12/311 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + L+++++R L + IDEAHC+S WGHDFRP Y++L LR
Sbjct: 802 IELLYITPEMVNKNQTLIRNLERLNNRHRLARIVIDEAHCVSQWGHDFRPDYKELGGLRA 861
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
LP VP++ALTATA V+ DV+ +L ++ + SFNRPNL YEVR K ++ A +
Sbjct: 862 QLPGVPMMALTATATENVKVDVIHNLKMEGCDIFTQSFNRPNLTYEVRQKKKGNELLASI 921
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWISS 194
+K++ + IVYCL R TC +++ L I YHAG+ R+ V W +
Sbjct: 922 ADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHAGMKPDERAEVQQRWQAG 981
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
R V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +YY D
Sbjct: 982 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKRSGCYMYYCYRD- 1040
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRKKILESFGEQIPV 313
M + S S+ R+R +++ V +CE S CRR +IL F E
Sbjct: 1041 -SMTITRMIDSSDGSKQQKNRQRQMLRNV------VQFCENKSDCRRVQILAYFNEHFRR 1093
Query: 314 SLCKNSCDACK 324
C SCD CK
Sbjct: 1094 EDCNASCDNCK 1104
>gi|237723404|ref|ZP_04553885.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|229447926|gb|EEO53717.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
Length = 608
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 110 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 163
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P + SSF+RPN+ V+ + +
Sbjct: 164 QFPQIPIVALTATADKITREDIVRQLHLNHPRIFISSFDRPNISLTVKRGFQAKEKNKAI 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 224 LEFIHRHGGESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 284 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL-- 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 342 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 390
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 391 GN-CDVCKNP 399
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1231
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 204/348 (58%), Gaps = 18/348 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSW 60
Q + + DL S P+L L+YVTPE+ +S L + +R LL DEAHC+S W
Sbjct: 547 QERENVMNDLRSVDPALCLVYVTPEMIMRSSVLSNILTDLKNRKLLARFVFDEAHCVSQW 606
Query: 61 GHDFRPSYRKLSS-LRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNL 119
GHDFRP Y+ + LR ++P +ALTATA +VQ+DVM +L + VL SFNR NL
Sbjct: 607 GHDFRPDYKDIGPMLRKEFKNIPFIALTATANHRVQQDVMSNLKITGCRVLTQSFNRINL 666
Query: 120 FYEVR--YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGG-ISCAAYH 176
YEVR KD+L+D + + G++ I+YCL + C+E++A+LSA I+ YH
Sbjct: 667 RYEVRPKTKDVLNDIIQII--TVDHKGES-GIIYCLSKKQCEEVAAHLSAKNRITAHHYH 723
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AG++ R + W + QV+ AT+AFGMGID+ DVR V H ++P S+E +YQE+GRA
Sbjct: 724 AGMSKDDRQKIQHGWQVGKLQVICATIAFGMGIDKPDVRFVIHHSMPSSLEGYYQETGRA 783
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD S+ +L+Y D ++ K+ + Q R++++ K Q+V +C
Sbjct: 784 GRDGQISECILFYAYRDFTAFMRMVEKSTTVKEQ--IERQQANAK------QVVGFCLNK 835
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDACKHPN-LLAKYLGELTSAVLQ 342
CRR +IL FGE+ S C+ +CD C +P ++ K + +L AV++
Sbjct: 836 LDCRRAQILSYFGEKFSASECRKTCDTCMNPERVVMKDVSQLMKAVVK 883
>gi|374628883|ref|ZP_09701268.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
gi|373906996|gb|EHQ35100.1| ATP-dependent DNA helicase RecQ [Methanoplanus limicola DSM 2279]
Length = 720
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/315 (39%), Positives = 183/315 (58%), Gaps = 18/315 (5%)
Query: 12 DSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKL 71
D+G+ + LLYV+PE A+ F LK ++L A+DEAHCIS WGH+FRP YR+L
Sbjct: 98 DAGRGDIDLLYVSPEKMASQSFRKLLKSAK----ISLFAVDEAHCISQWGHEFRPEYRQL 153
Query: 72 SSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDD 131
++ P VP++ALTATA P V+ D++ L L++P V SF R NL YEVR K+ D
Sbjct: 154 GLIKREFPGVPVIALTATANPAVRDDILRQLKLKDPFVQIGSFRRSNLNYEVREKE---D 210
Query: 132 AYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDW 191
+ S ++ I+YC R + + L+ L++ GI YHAGL+ R+ + +
Sbjct: 211 TLGQILSYIRGKKGESGIIYCSSRNSVEILTKKLNSYGIYSLPYHAGLSKDERAKTQEKF 270
Query: 192 ISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGM 251
I +VVATVAFGMGI++ DVR V H+++P ++E +YQE+GRAGRD S +L+Y
Sbjct: 271 IKGEVFLVVATVAFGMGINKPDVRYVLHYDLPPNLERYYQETGRAGRDGKSSDCILFYSR 330
Query: 252 DDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQI 311
DR + E+ + + QS + + RE+ +M ++CE CR +L+ FGE +
Sbjct: 331 GDRIKAEYFIGRMQSAKQKRIA-REK--------LDEMTEFCESDRCRVSYMLKYFGEAV 381
Query: 312 PVSLCKNSCDACKHP 326
C CD C +P
Sbjct: 382 -TERC-GRCDNCINP 394
>gi|84994972|ref|XP_952208.1| DNA helicase (SGS1 homologue) [Theileria annulata strain Ankara]
gi|65302369|emb|CAI74476.1| DNA helicase (SGS1 homologue), putative [Theileria annulata]
Length = 875
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/310 (43%), Positives = 182/310 (58%), Gaps = 5/310 (1%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ +L++TPE L + + L +HSR ++ IDE HC+S WG+DFRP Y +L +R
Sbjct: 306 ISILFITPESLMGSKLLLENLLIMHSRNKISRFVIDEVHCVSQWGNDFRPHYGQLGMIRK 365
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL-LDDAYAD 135
PDVPILALTATA V KDV+ L L++ ++ KS FNR NL Y V K A
Sbjct: 366 NFPDVPILALTATATEYVTKDVITKLMLRDVVIFKSDFNRKNLEYVVVEKSKHFKVAINQ 425
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L +++ D+C IVYCL + +SA LS I+C YHA L+ R++V +DWI+ R
Sbjct: 426 LVKLIQQFEDSCGIVYCLSCGEAERVSAELSRV-ITCFHYHAQLSTIVRTNVYNDWINDR 484
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+V+VAT+AFGMGID+KDVR V HF++ KS+E ++QESGRAGRDQ S +L Y D +
Sbjct: 485 IKVIVATIAFGMGIDKKDVRFVVHFSVSKSIENYFQESGRAGRDQKKSTCILMYNYHDIQ 544
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVS 314
R + S + S+ T I M+DYCE CRR +L FG++ S
Sbjct: 545 RHILLNSPLHVQPSKFTPTTTNEFDNKIDKILVMMDYCEEKFLCRRFMLLGYFGQKF-TS 603
Query: 315 LCKNSCDACK 324
C CD CK
Sbjct: 604 KCLLPCDNCK 613
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 173/310 (55%), Gaps = 11/310 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ LLY+TPE+ + F + L+K++ G + IDEAHC+S WGHDFRP Y+ L R
Sbjct: 916 IELLYITPEMISKNMAFNAALQKLYQNGKFARLVIDEAHCVSQWGHDFRPDYKALGQARK 975
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VP++ALTATA V D+ +L + V SFNRPNLFYEVR K + +
Sbjct: 976 KFPNVPVMALTATATQNVIVDIRHNLGMHTCKVFSQSFNRPNLFYEVRPKGTAASSIETI 1035
Query: 137 CSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
++ ++ IVY L R + ++ L GIS YHAG+ + SV W
Sbjct: 1036 ADLIHSHYAGLTGIVYALSRKGTENVAKKLGEAGISAYHYHAGMTPPEKVSVQKKWQKGD 1095
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+VVVAT+AFGMGID+ DVR V H +PKS+E +YQE+GRAGRD PS +L YG D
Sbjct: 1096 VKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAGRDGKPSDCILLYGKRDIT 1155
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
++ +++ + Q + + +++ +C+ CRR ++L FGE +
Sbjct: 1156 VLKKMITDGEGNQQQ--------KDRQMEMLNRVASFCDNQWDCRRTEVLRYFGEDFSAA 1207
Query: 315 LCKNSCDACK 324
C+ +CD C+
Sbjct: 1208 QCQKNCDNCQ 1217
>gi|116180606|ref|XP_001220152.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
gi|88185228|gb|EAQ92696.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
Length = 1451
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 177/309 (57%), Gaps = 11/309 (3%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
++LLYVTPE+ T +P F ++ ++ +G L + IDEAHC+S WGHDFRP Y+ L + R
Sbjct: 670 VQLLYVTPEMITNSPAFKKGIQTLYDKGKLARIVIDEAHCVSHWGHDFRPDYKALGTFRA 729
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA V DV +L ++N + SFNRPNL+YEV K
Sbjct: 730 AFPGVPVMALTATATKNVMADVKHNLSMENCEIFTQSFNRPNLYYEVIPKAARFIGGMGK 789
Query: 137 CSVLKANGDTCAIVYCLERTTCD-ELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
K G C IVYCL R + + +A ++ I YHA ++ +A+ V + W
Sbjct: 790 LITTKYPG-QCGIVYCLSRKSAEGTATALVTKHNIKARYYHAQMDPEAKVEVQEKWQKGE 848
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
VVVAT+AFGMGID+ DVR V H N+PKS+E +YQE+GRAGRD PS LY+ D
Sbjct: 849 VHVVVATIAFGMGIDKPDVRFVIHQNMPKSLEGYYQETGRAGRDGNPSDCYLYFAYSDIP 908
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQIPVS 314
+ ++++++ K + +ER ++MV YCE S CRR +IL F E
Sbjct: 909 TLRRMVNEDRDKQP---AEKERQHAM----INRMVSYCESSYACRRVQILRYFDEAFNAK 961
Query: 315 LCKNSCDAC 323
C + CD C
Sbjct: 962 ECGSMCDNC 970
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 179/324 (55%), Gaps = 22/324 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ + + L+LLYVTPE A + FM+ L+K + LL +AIDE HC S WGHDFR
Sbjct: 182 VHRQMIDARSELKLLYVTPEKIAKSKRFMACLEKAYKANLLTRIAIDEVHCCSQWGHDFR 241
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y+ L L+ D PIL LTATA V DV L LQ V ++ FNRPNLFYEVR
Sbjct: 242 PDYKILGLLKRQFTDTPILGLTATATMDVLDDVKGILGLQGCQVFRAGFNRPNLFYEVRP 301
Query: 126 KDLLDDAYADLCSVLKANGD---TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K + + L NG+ I+YC R + ++ L GGI YHA L+ +
Sbjct: 302 KPSKQAEFVEELIKL-INGEFKGQSGIIYCFSRKDTETMAENLKKGGIQAHPYHAMLDAQ 360
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS V +W + QVVVATVAFGMGID+ DVR V H +I KSME +YQESGRAGRD P
Sbjct: 361 YRSQVHRNWKENNIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAGRDDEP 420
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEG-SGCRRK 301
++ ++YYG+ D R ++ Q+ + ++ MV YC + CRR
Sbjct: 421 ARCIVYYGIGDVFRQSTMVVTEQTGQQKLYN---------------MVAYCVAPATCRRS 465
Query: 302 KILESFGEQIP-VSLCKNSCDACK 324
I + FGE+ + C CD C+
Sbjct: 466 LIGQHFGERWEGQARCNRMCDVCQ 489
>gi|121603031|ref|YP_980360.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
gi|120592000|gb|ABM35439.1| ATP-dependent DNA helicase RecQ [Polaromonas naphthalenivorans CJ2]
Length = 639
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 133/313 (42%), Positives = 175/313 (55%), Gaps = 20/313 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLY PE TP L +H RGLL+L AIDEAHC+S WGHDFRP YR LS L
Sbjct: 128 LTLLYAAPERINTPRMKGLLASLHERGLLSLFAIDEAHCVSQWGHDFRPEYRSLSLLHET 187
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
PDVP +ALTATA ++D++E L L++ + SSF+RPN+ Y + K DA L
Sbjct: 188 FPDVPRMALTATADALTRQDMIERLKLEDARLFLSSFDRPNIRYTIVEK---TDATRQLL 244
Query: 138 SVLKA-NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
++A + IVYC R +E++ L GI AYHAGL+ K R D ++
Sbjct: 245 RFIQAEHHGEAGIVYCQSRKRVEEIAGMLEDAGIKAMAYHAGLDAKLRQQRQDRFLREDG 304
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD--- 253
V+VAT+AFGMGID+ DVR V H ++PK++E +YQE+GRAGRD LP+ + + YG+ D
Sbjct: 305 CVMVATIAFGMGIDKPDVRFVAHLDMPKNIEGYYQETGRAGRDGLPADAWMVYGLQDVVN 364
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPV 313
+RRM S+ F R ++ EG+ CRR +L FGE
Sbjct: 365 QRRM----IDTSEVASEEFKAVMRGK------LDALLTLAEGTRCRRVSLLGYFGEA--S 412
Query: 314 SLCKNSCDACKHP 326
C N CD C P
Sbjct: 413 EPCGN-CDNCLTP 424
>gi|336417153|ref|ZP_08597482.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423298263|ref|ZP_17276322.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|335936778|gb|EGM98696.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392663679|gb|EIY57227.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 608
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 110 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 163
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P + SSF+RPN+ V+ + +
Sbjct: 164 QFPQIPIVALTATADKITREDIVRQLHLNHPRIFISSFDRPNISLTVKRGFQAKEKNKAI 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 224 LEFIHRHGGESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 284 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTVLFYSLGDL-- 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 342 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 390
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 391 GN-CDVCKNP 399
>gi|262409277|ref|ZP_06085820.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|262352729|gb|EEZ01826.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
Length = 608
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 110 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 163
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 164 QFPQIPIVALTATADKITREDIVRQLHLNHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 223
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 224 LEFIHRHGGESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 283
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 284 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL-- 341
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 342 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 390
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 391 GN-CDVCKNP 399
>gi|53714712|ref|YP_100704.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|52217577|dbj|BAD50170.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
Length = 607
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 110 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 165 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 225 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 285 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 342 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 391
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 392 N-CDVCRNP 399
>gi|189345599|ref|YP_001942128.1| ATP-dependent DNA helicase RecQ [Chlorobium limicola DSM 245]
gi|189339746|gb|ACD89149.1| ATP-dependent DNA helicase RecQ [Chlorobium limicola DSM 245]
Length = 615
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 179/302 (59%), Gaps = 17/302 (5%)
Query: 22 YVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLPDV 81
YV PE F L +++ +++ IDEAHCIS WGHDFRP Y LS+L PD+
Sbjct: 117 YVAPERFTLEQFREMLGRVN----ISMAVIDEAHCISEWGHDFRPDYLSLSALVTLFPDL 172
Query: 82 PILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCSVLK 141
P+ A TATA VQ+D+++ L L++PLV+++SF+R NLFY++R+K +++ + ++++
Sbjct: 173 PVTAFTATATHLVQQDILDKLSLRDPLVVRASFDRGNLFYDIRFK---ENSGEQIAAIVR 229
Query: 142 ANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQVVVA 201
+N I+Y R ++ +A L A G YHAGL D+ R D +I V+VA
Sbjct: 230 SNQGKAGIIYRTSRKNVNDTTAMLKAKGFRALPYHAGLGDEERKRNQDAFIRDEADVIVA 289
Query: 202 TVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFIL 261
TVAFGMGID+ ++R V H ++PKS+E +YQE+GRAGRD ++ L + D ++ F +
Sbjct: 290 TVAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEAAQCTLLFSQGDIPKVRFFI 349
Query: 262 SKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKNSCD 321
T E + ++ FS+++ + S CRRK +L+ FGE P C NSCD
Sbjct: 350 DT---------ITDEAERARVLAAFSKVIAFASTSVCRRKTLLDYFGETYPHDNC-NSCD 399
Query: 322 AC 323
C
Sbjct: 400 IC 401
>gi|148266306|ref|YP_001233012.1| ATP-dependent DNA helicase RecQ [Geobacter uraniireducens Rf4]
gi|146399806|gb|ABQ28439.1| ATP-dependent DNA helicase RecQ [Geobacter uraniireducens Rf4]
Length = 715
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/311 (40%), Positives = 183/311 (58%), Gaps = 19/311 (6%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L L+YV PE + F+ +LK++ + L AIDEAHC+S WGHDFRP Y +L LR
Sbjct: 107 ALDLIYVAPERLMSEPFLERLKEME----IALFAIDEAHCVSQWGHDFRPEYVQLGRLRR 162
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VP++ALTATA + + D++E L LQ + F+RPN+ Y V K + L
Sbjct: 163 LFPQVPMIALTATADAQTRGDIIERLGLQGAACHVAGFDRPNIRYTVMEKQ---KPFVQL 219
Query: 137 CSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
+ L G D IVY L R +E++ LSA GI+ A YHAGL D+ RS V + +
Sbjct: 220 TTFLAGRGRDEAGIVYALSRKRVEEVAERLSAAGIAAAPYHAGLPDRERSRVQEAFQRDE 279
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
QVVVATVAFGMGID+ +VR V H+++PK++E++YQE+GR+GRD LP+++LL +G D
Sbjct: 280 LQVVVATVAFGMGIDKPNVRFVVHYDLPKNIESYYQETGRSGRDGLPAEALLLFGYGD-- 337
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSL 315
++++ +N + ++ + + MV + E CRR+ +L FG +
Sbjct: 338 ---IAVARSLIENGGN----AEQNRIELHKLNAMVGFAEAVTCRRRVLLGYFGATLAED- 389
Query: 316 CKNSCDACKHP 326
C N CD C P
Sbjct: 390 CGN-CDICIKP 399
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 179/323 (55%), Gaps = 19/323 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ + + G LRLLYVTPE L + M++L+K G L L+AIDE HC S WGHDF
Sbjct: 167 RVEQAITKGSTELRLLYVTPEKLAKSKRMMNQLEKSLGVGYLKLIAIDEVHCCSQWGHDF 226
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
R Y L+ L+ VPIL LTATA V DV + L + +V ++ FNR NL Y+V
Sbjct: 227 RTDYSFLNVLKRQFKGVPILGLTATATSNVLDDVKKMLGIPVAIVFRAGFNRANLNYKVL 286
Query: 125 YKDLLDDAYAD--LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K +D + + ++ + I+YCL R C++L+ L A GI YHA +
Sbjct: 287 TKPGSEDECVEKIVRTIKRKFSGKTGIIYCLSRNDCEKLAKSLKANGIRAKHYHAYMEPV 346
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS+ W+S QV+VATVAFGMGID+ DVR V H ++PKS+E +YQESGRAGRD LP
Sbjct: 347 DRSAAHQKWVSGEIQVIVATVAFGMGIDKPDVRFVIHHSLPKSIENYYQESGRAGRDGLP 406
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRK 301
+ +LYY M D + ++ + Q+ I++ MV Y + CRR
Sbjct: 407 ATCILYYRMSDIFKQSSMIQQEQT---------------GIANLYNMVRYASDTVTCRRV 451
Query: 302 KILESFGEQIPVSLCKNSCDACK 324
K+ E F E S C+ CD C+
Sbjct: 452 KLAEHFEEAWEPSWCQKQCDVCE 474
>gi|385301828|gb|EIF45990.1| atp-dependent helicase [Dekkera bruxellensis AWRI1499]
Length = 358
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 182/317 (57%), Gaps = 28/317 (8%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y +PE+ + G + ++K+H G L V +DEAHC+SSWGHDFRP Y+ LS +
Sbjct: 39 LDLVYFSPEMISASGQCKRAIEKLHRDGRLARVVVDEAHCVSSWGHDFRPDYKALSYFKE 98
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV---------RYKD 127
PD+P++ALTATA V D++ +L L +P LK SFNR NL+Y V R +
Sbjct: 99 QYPDIPVMALTATANDHVCLDIVHNLKLSSPKFLKQSFNRTNLYYGVVPKKKNTVQRIAE 158
Query: 128 LLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSV 187
L++ Y + I+YC + +C+ S L A GI C YHAG++ + RS V
Sbjct: 159 LINKKYTNYT----------GIIYCHSKNSCEHTSEKLCAFGIKCDFYHAGMSTEDRSRV 208
Query: 188 LDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLL 247
W + +V+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S L+
Sbjct: 209 QMAWQHDQIKVICATIAFGMGIDKPDVRFVIHLTMPRNLEGYYQETGRAGRDGKHSDCLM 268
Query: 248 YYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILES 306
YY M D ++ ++ +++ + S ++ ++ Q++ YCE + CRR+++L+
Sbjct: 269 YYSMRDAMTLQNLIQRDRELDRD-------SKEQHLAKLRQVIQYCENTTDCRRQQVLQY 321
Query: 307 FGEQIPVSLCKNSCDAC 323
F E C CD C
Sbjct: 322 FNESFDRKNCHKQCDNC 338
>gi|383119448|ref|ZP_09940187.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|382973213|gb|EES87060.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
Length = 601
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 104 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 159 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAIV 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 219 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 336 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|367034884|ref|XP_003666724.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
gi|347013997|gb|AEO61479.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
Length = 485
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 202/364 (55%), Gaps = 30/364 (8%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ +IY+DL +G P RLLYVTPEL + F +LK +H + L + +DEAHCIS WGHD
Sbjct: 103 RDRIYQDLATGHPRARLLYVTPELCSLDRFRERLKFVHEQRELARIVVDEAHCISEWGHD 162
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLKS---SFNRPNL 119
FR +++LS R PDVPI+ LTATA +V++D++ +L L + P L++ + +RPNL
Sbjct: 163 FRRDFKRLSWFRETFPDVPIMCLTATANEQVRRDILSTLGLDKTPERLRNFTMTAHRPNL 222
Query: 120 FYEVRYK-DLLDDAYADLCSVLK----------------ANGDTC----AIVYCLERTTC 158
EVR+ D +D Y D + LK A G+ I+Y L R C
Sbjct: 223 HLEVRFTSDEANDRYDDFVTWLKGVYSRRAAADRKRELDATGERVENVPGIIYTLSRDEC 282
Query: 159 DELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK--QVVVATVAFGMGIDRKDVRL 216
+ L+A L I +HA L + + L WI++ ++VAT AFGMGID+++VR
Sbjct: 283 ESLAAALRCDEIGARPFHAKLPKEVKEETLARWIANEPGYDIIVATTAFGMGIDKENVRF 342
Query: 217 VCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRE 276
V H+ +PKS E +YQE+GRAGRD S LYY +DR R+ ++ ++ + +
Sbjct: 343 VVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYAREDRDRVCNMVMRDGPGSGAGGAGSA 402
Query: 277 RSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVSLCKNSCDACKH-PNLLAKYLG 334
++ + + S++V+YCE + CR I FGE+ V C +CD K P L + +
Sbjct: 403 KNKQARLESLSRLVEYCEDTNTCRHAAICRYFGEE-QVPECDYACDWHKDAPGLKRRMMK 461
Query: 335 ELTS 338
L S
Sbjct: 462 GLAS 465
>gi|336411370|ref|ZP_08591837.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|423251179|ref|ZP_17232194.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423254505|ref|ZP_17235435.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|335942081|gb|EGN03930.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|392652136|gb|EIY45798.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392653827|gb|EIY47478.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
Length = 601
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 104 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 158
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 159 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 218
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 219 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 278
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 279 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 335
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 336 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 385
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 386 N-CDVCRNP 393
>gi|418938640|ref|ZP_13492125.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. PDO1-076]
gi|375054623|gb|EHS50962.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. PDO1-076]
Length = 619
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 17/312 (5%)
Query: 15 KPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSL 74
+ L LLYVTPE TP F K+ ++L AIDEAHC+S WGHDFRP YR+L L
Sbjct: 120 RGELDLLYVTPERIVTPAF----KETIGNAKISLFAIDEAHCVSQWGHDFRPEYRELGRL 175
Query: 75 RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYA 134
P VP +ALTATA P ++D+++ L L + V +SF+RPN+ YE+ +D
Sbjct: 176 AQEYPGVPRMALTATADPHTREDIIDKLQLHSAEVFTTSFDRPNIAYEIVERD---QPRQ 232
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
L L + + IVYCL R ++ + +L+ GI+ AYHAG++ R + D ++
Sbjct: 233 QLLRFLSRHKGSSGIVYCLSRAKVEDTAEWLNTQGINALAYHAGMDRAVRDANQDAFLKE 292
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS + YGM D
Sbjct: 293 EDLCLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSDVWMAYGMADV 352
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
+ ++ + S N R + + ++ CE +GCRR+ IL+ FGE
Sbjct: 353 IQRGRMIDEGSSGNDIKRVERAK--------LNALLAICETAGCRRQAILKHFGEAHG-G 403
Query: 315 LCKNSCDACKHP 326
C N CD C P
Sbjct: 404 QCGN-CDTCLKP 414
>gi|228473728|ref|ZP_04058475.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
gi|228274840|gb|EEK13658.1| ATP-dependent DNA helicase RecQ [Capnocytophaga gingivalis ATCC
33624]
Length = 729
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 183/306 (59%), Gaps = 21/306 (6%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
+ ED+ +G +LLYV PE + LK I+ ++ VA+DEAHCIS WGHDFRP
Sbjct: 105 VMEDIRNG--DTKLLYVAPESLTKDEYADFLKTIN----ISFVAVDEAHCISEWGHDFRP 158
Query: 67 SYRKLSSLRNYLPD-VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
YR + ++ L + +PI+ALTATA KVQ+D++++L + V KSSFNRPNL+YEVR
Sbjct: 159 EYRNIKTIIERLGEGIPIIALTATATTKVQEDILKNLGVPEANVFKSSFNRPNLYYEVRP 218
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K I+YCL R + +EL+ L GI+ YHAGL+ K R+
Sbjct: 219 K--TKNINSDIIRFVKQRPGQSGIIYCLSRKSVEELAQTLQVNGITAIPYHAGLDAKTRA 276
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ VVVAT+AFGMGID+ DVR V H++IPKS+E++YQE+GRAGRD
Sbjct: 277 KHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGRDGGEGYC 336
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L +Y D ++E F++ K E+ +++ MV Y E S RRK IL
Sbjct: 337 LAFYCYKDIEKLEKFMVGK---------PIAEQEVGQAL--LQDMVAYAETSSSRRKFIL 385
Query: 305 ESFGEQ 310
FGE+
Sbjct: 386 HYFGEE 391
>gi|375359515|ref|YP_005112287.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|301164196|emb|CBW23754.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
Length = 607
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 122/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 110 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 165 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + IVYC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 225 DFITRHRGESGIVYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 285 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 342 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 391
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 392 N-CDVCRNP 399
>gi|357383276|ref|YP_004898000.1| ATP-dependent DNA helicase RecQ [Pelagibacterium halotolerans B2]
gi|351591913|gb|AEQ50250.1| ATP-dependent DNA helicase RecQ [Pelagibacterium halotolerans B2]
Length = 629
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/312 (41%), Positives = 180/312 (57%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE A GF+ L + + L AIDEAHC+S WGHDFRP YR+L+ LR
Sbjct: 136 LDLLYVAPERLAATGFLDLLASVD----IGLFAIDEAHCVSQWGHDFRPEYRELAKLREL 191
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P + D++E L L++ + SSF+RPN+ Y + + +A + L
Sbjct: 192 FPHVPRVALTATADPTTRADLIERLGLEDAQLFISSFDRPNIGYSIVERS---NARSQLL 248
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + IVYCL R + ++ +L+ GI+ YHAGL+ R+ D ++
Sbjct: 249 DFLGRHKGESGIVYCLSRAKVEAVAEFLTEKGIAALPYHAGLDAGVRARNQDAFLKEDAV 308
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD PS++ + YG+ D R
Sbjct: 309 CLVATVAFGMGIDKPDVRYVAHMDLPSSIEAYYQETGRAGRDGQPSEAWMCYGLSDVSQR 368
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM I N + + + S ++ CE +GCRR+ +L FGE +
Sbjct: 369 RRM--IAEGNAPDDVKRLEN---------NKLSALLGVCETAGCRRQAVLAHFGETHQGN 417
Query: 315 LCKNSCDACKHP 326
C N CD C +P
Sbjct: 418 -CGN-CDTCINP 427
>gi|345509360|ref|ZP_08788959.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|345454812|gb|EEO52054.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
Length = 602
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 158 QFPQIPIVALTATADKITREDIVRQLHLNHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 218 LEFIHRHGGESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|424790625|ref|ZP_18217151.1| DNA helicase [Xanthomonas translucens pv. graminis ART-Xtg29]
gi|422797927|gb|EKU26107.1| DNA helicase [Xanthomonas translucens pv. graminis ART-Xtg29]
Length = 602
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 188/325 (57%), Gaps = 19/325 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+ ++ +L +G+ L LLYV PE TP F+S L+ R + L AIDEAHC+S WG
Sbjct: 94 ETAQRVERELLAGE--LDLLYVAPERLLTPRFLSLLE----RSRIALFAIDEAHCVSQWG 147
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L+ L P +P +ALTATA P Q+++ E L L SSF+RPN+ Y
Sbjct: 148 HDFRPEYRQLTVLHERWPQIPRIALTATADPPTQREIAERLDLTQARHFVSSFDRPNIRY 207
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V KD ++ L L+A+ + IVYC+ R +E + +L+ G++ YHAGL
Sbjct: 208 TVVQKD---NSKRQLLDFLRAHRGSAGIVYCMSRRKVEETAEFLAKEGLNALPYHAGLPA 264
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ ++ V+ AT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD
Sbjct: 265 EVRAGNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAHTDLPKSLEGYYQETGRAGRDGE 324
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+++ L YG+ D +L K + ++ R+R ++ + Q++ YCE CRR+
Sbjct: 325 AAEAWLCYGLGD-----VVLLKQMIEKGEAGEDRKRVERRKL---DQLLGYCESMQCRRQ 376
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+L FGE P C N CD C P
Sbjct: 377 VLLAGFGETYPQP-CGN-CDNCLTP 399
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 184/312 (58%), Gaps = 17/312 (5%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+++LYVTPE L+ ++ +++HS G L + IDEAHC+S WGHDFRP Y+ L +
Sbjct: 964 IQILYVTPEMLSKNQRMINAFQQLHSGGNLARIVIDEAHCVSQWGHDFRPDYKALGDVVR 1023
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYA 134
P VP+LALTATA V+ DV+ +L +Q SFNRPNL YEV + K ++++ A
Sbjct: 1024 QFPGVPVLALTATATKLVRSDVVSNLGIQGCREFSQSFNRPNLSYEVLPKAKGIINN-IA 1082
Query: 135 DLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
DL + + I+YCL R +C++++ LS GI YHAG++ RS V W +
Sbjct: 1083 DL--IKERYVGKSGIIYCLSRKSCEQVAQKLSEMGIRAYHYHAGMDSADRSDVQRKWQKN 1140
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
V+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S+ LYY D
Sbjct: 1141 EYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLYYQYADS 1200
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISD-FSQMVDYCEGSG-CRRKKILESFGEQIP 312
R + ++ + + R K+ +SD ++ YCE CRR ++L F E
Sbjct: 1201 RILRKMIDEGEG---------SREQKQRLSDMLRTVIQYCENKADCRRAQVLGYFSEAFD 1251
Query: 313 VSLCKNSCDACK 324
S C ++CD C+
Sbjct: 1252 ASKCNSTCDNCR 1263
>gi|294644712|ref|ZP_06722461.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294805927|ref|ZP_06764794.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|292639975|gb|EFF58244.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294446809|gb|EFG15409.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
Length = 621
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 123 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 176
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P SSF+RPN+ V+ + +
Sbjct: 177 QFPQIPIVALTATADKITREDIVRQLHLNHPRTFISSFDRPNISLTVKRGFQAKEKNKAI 236
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R+ + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 237 LEFIHRHGGESGIIYCMSRSKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 296
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 297 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSNTVLFYSLGDL-- 354
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 355 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 403
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 404 GN-CDVCKNP 412
>gi|433678735|ref|ZP_20510560.1| DNA helicase [Xanthomonas translucens pv. translucens DSM 18974]
gi|430816172|emb|CCP41071.1| DNA helicase [Xanthomonas translucens pv. translucens DSM 18974]
Length = 602
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 188/325 (57%), Gaps = 19/325 (5%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+ ++ +L +G+ L LLYV PE TP F+S L+ R + L AIDEAHC+S WG
Sbjct: 94 ETAQRVERELLAGE--LDLLYVAPERLLTPRFLSLLE----RSRIALFAIDEAHCVSQWG 147
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFRP YR+L+ L P +P +ALTATA P Q+++ E L L SSF+RPN+ Y
Sbjct: 148 HDFRPEYRQLTVLHERWPQIPRIALTATADPPTQREIAERLDLTQARHFVSSFDRPNIRY 207
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V KD ++ L L+A+ + IVYC+ R +E + +L+ G++ YHAGL
Sbjct: 208 TVVQKD---NSKRQLLDFLRAHRGSAGIVYCMSRRKVEETAEFLAKEGLNALPYHAGLPA 264
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
+ R+ ++ V+ AT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD
Sbjct: 265 EVRADNQRRFLREDGIVMCATIAFGMGIDKPDVRFVAHTDLPKSLEGYYQETGRAGRDGE 324
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
+++ L YG+ D +L K + ++ R+R ++ + Q++ YCE CRR+
Sbjct: 325 AAEAWLCYGLGD-----VVLLKQMIEKGEAGEDRKRVERRKL---DQLLGYCESMQCRRQ 376
Query: 302 KILESFGEQIPVSLCKNSCDACKHP 326
+L FGE P C N CD C P
Sbjct: 377 VLLAGFGETYPQP-CGN-CDNCLTP 399
>gi|270293488|ref|ZP_06199690.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270274955|gb|EFA20815.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 603
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 179/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ IH ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDIH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L P + SSF+RPNL V+ + +
Sbjct: 158 LFPQVPIIALTATADKITREDIIKQLHLNQPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKTESVAQMLQKHGIRSAVYHAGLSPARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
Q V AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QAVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINLEKLQRMQQYAEADICRRRILLSYFGENTTCD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|46201335|ref|ZP_00055249.2| COG0514: Superfamily II DNA helicase [Magnetospirillum
magnetotacticum MS-1]
Length = 607
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 184/313 (58%), Gaps = 21/313 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L L+YV PE PGF++ L+ + L AIDEAHC+S WGHDFRP Y +L+ L
Sbjct: 107 LDLVYVAPERLVLPGFLALLEDCR----IALFAIDEAHCVSQWGHDFRPEYLQLALLHER 162
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA +KD+ E L LQ + F+RPN+ Y + K+ +A L
Sbjct: 163 FPSVPRIALTATADGPTRKDIAERLNLQEGRQFIAGFDRPNIRYRIATKN---NAREQLA 219
Query: 138 SVLKAN----GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
L+A G IVYCL R +E +++L+ G + AYHAGL+ R++ ++
Sbjct: 220 RFLEAEHGGPGAESGIVYCLSRAKVEETASWLAGKGYTALAYHAGLDQPVRAANQQRFLR 279
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
V+VAT+AFGMGID+ DVR V H ++PKS+EA+YQE+GRAGRD LP+ + + YG++D
Sbjct: 280 EEGIVMVATIAFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLED 339
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPV 313
++ ++ +Q+ ++Q R++ + ++ CE + CRR+ +LE FGE +
Sbjct: 340 VGKLGQFIASSQASDAQKRIERQK--------LNALLGLCETTRCRRQVLLEYFGE-MGH 390
Query: 314 SLCKNSCDACKHP 326
C N CD C P
Sbjct: 391 PPCGN-CDTCLEP 402
>gi|423278476|ref|ZP_17257390.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|404586486|gb|EKA91059.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 601
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 183/314 (58%), Gaps = 21/314 (6%)
Query: 13 SGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLS 72
SGK L+LLY++PE +S+ + ++L A+DEAHCIS WGHDFRP Y ++
Sbjct: 101 SGK--LKLLYISPE-----KLLSEADYLLRDMTISLFAVDEAHCISQWGHDFRPEYARMG 153
Query: 73 SLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDA 132
LR P++P++ALTATA ++D++ L L+ P + SSF+RPNL V+ +
Sbjct: 154 FLRTQFPNIPMIALTATADKITREDIVRQLQLKQPEIFISSFDRPNLSLSVKRGYQPKEK 213
Query: 133 YADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWI 192
+ + + I+YC+ R+ + ++ L GI C YHAGL+ + R DD+I
Sbjct: 214 SKAIVDFIARHRGESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFI 273
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
+ R +VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS ++L+Y +
Sbjct: 274 NDRIEVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLG 333
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIP 312
D +L+K F+T ++ ++M Y E CRR+ +L FGE
Sbjct: 334 DL----ILLTK--------FATESNQQNINLEKLNRMQQYAEADICRRRILLSYFGE-TA 380
Query: 313 VSLCKNSCDACKHP 326
C N CD C++P
Sbjct: 381 TEDCGN-CDVCRNP 393
>gi|387793516|ref|YP_006258581.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379656349|gb|AFD09405.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 705
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 134/323 (41%), Positives = 191/323 (59%), Gaps = 28/323 (8%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKK---IHSRGLLNLVAIDEAHCISSWGHD 63
+ ED +G +++LLY++PE KLK + R + L+AIDEAHCISSWGHD
Sbjct: 99 VIEDCING--NIKLLYLSPE---------KLKSSIPMLGRFNIQLLAIDEAHCISSWGHD 147
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP Y +LS L+ DVPI+ALTATA +KD++ L L P +SF+RPNL EV
Sbjct: 148 FRPEYTQLSILKERFSDVPIVALTATADRVTRKDIIRQLNLHKPATFVASFDRPNLNLEV 207
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ ++ + + + I+YCL R T +EL+ L ++ AAYHAG++
Sbjct: 208 KTGIKTRQKDQEIVQFIHSKPNQSGIIYCLSRKTTEELAEKLREHQVNAAAYHAGMSADD 267
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R+ +D+I+ R QVV ATVAFGMGID+ +VR V H+N+PK++E +YQE GRAGRD L S
Sbjct: 268 RNETQEDFINDRVQVVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLES 327
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+++LYY + D +L ++ SQ RE + +K ++ + E CRRK +
Sbjct: 328 ETILYYNLVD-----IVLLTQFAEQSQQ---RELNLEK----LKRIQQFAEADICRRKIL 375
Query: 304 LESFGEQIPVSLCKNSCDACKHP 326
+ FGE S C N CD CK+P
Sbjct: 376 INYFGENFEDS-CGN-CDVCKNP 396
>gi|238022984|ref|ZP_04603410.1| hypothetical protein GCWU000324_02906 [Kingella oralis ATCC 51147]
gi|237865792|gb|EEP66930.1| hypothetical protein GCWU000324_02906 [Kingella oralis ATCC 51147]
Length = 604
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 188/328 (57%), Gaps = 29/328 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
+I ED+DSG SL+LLYV+PE T F+ L ++L AIDEAHC+S WGHDFR
Sbjct: 97 QIAEDIDSG--SLKLLYVSPERLTTEKFLRFLDHT----TVSLFAIDEAHCVSQWGHDFR 150
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV-- 123
P Y++LS L P +P +ALTATA + + D+ L L + SSF+RPN+ Y+V
Sbjct: 151 PEYQQLSLLAQRYPHIPRIALTATADAQTRLDIKHYLQLNDAAEFISSFDRPNIHYQVIE 210
Query: 124 ---RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLN 180
K LLD + K IVYCL R + ++++ YL G++ YHAGL
Sbjct: 211 RQNGKKQLLD-------FIQKQAAGQSGIVYCLSRKSVEDIAQYLCDSGLNALPYHAGLP 263
Query: 181 DKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQ 240
+ RS + ++VATVAFGMGID+ DVR V H ++P+S+E FYQESGRAGRD
Sbjct: 264 IQTRSQNQHRFTHEDNIIIVATVAFGMGIDKPDVRYVAHLDMPQSVEHFYQESGRAGRDG 323
Query: 241 LPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRR 300
LP+ S L YGM++ +L + + + S S E+ + + + M D CE + CRR
Sbjct: 324 LPATSWLCYGMNN-----LMLLRERIQES---SVSEQQKQIELQKLNAMFDICETAECRR 375
Query: 301 KKILESFGEQIPVSLCKNSCDACKHPNL 328
+L FGE+ C N CD C+HP +
Sbjct: 376 VLLLRHFGEE--SQPCGN-CDNCQHPPI 400
>gi|224004394|ref|XP_002295848.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585880|gb|ACI64565.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 291
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/247 (49%), Positives = 154/247 (62%), Gaps = 8/247 (3%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
+++LY TPEL T F + L K+HS L+L+AIDEAHC+S+WGHDFRP+YRKL LR
Sbjct: 49 IQILYCTPELLETDKFRAILTKLHSARRLHLIAIDEAHCLSTWGHDFRPAYRKLRLLREA 108
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLV--LKSSFNRPNLFYEVRYKDLLDDAYAD 135
P VPI+A T TA KV +D+ + LCL + L +FNRPN+ YEVRYKD L A+
Sbjct: 109 FPSVPIMACTGTATSKVVQDIRDVLCLDSTTAPCLMGTFNRPNISYEVRYKDSLQHDVAE 168
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLS-AGGISCAAYHAGLNDKARSSVLDDWISS 194
KA I+Y +R C L+ +S G+ AAYHAGL D R W +
Sbjct: 169 -----KAKQPCSGIIYVHKREDCTTLAIQISKTTGLVAAAYHAGLKDAEREDTQQKWTAG 223
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
V VATVAFGMGID VR V H+++ KS+E FYQESGRAGRD PS S+LYY DD
Sbjct: 224 SVHVAVATVAFGMGIDLPHVRYVVHWSLAKSLEGFYQESGRAGRDGKPSISILYYSKDDA 283
Query: 255 RRMEFIL 261
+ F+L
Sbjct: 284 SKFAFLL 290
>gi|124484849|ref|YP_001029465.1| hypothetical protein Mlab_0020 [Methanocorpusculum labreanum Z]
gi|124362390|gb|ABN06198.1| ATP-dependent DNA helicase, RecQ family [Methanocorpusculum
labreanum Z]
Length = 493
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 191/339 (56%), Gaps = 18/339 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ +D+ GK +R+LYV+PE TP F + L S + L A+DEAHCIS WGH
Sbjct: 96 RRRVEQDMRDGK--VRILYVSPERAVTPAFFATL----SGCKVALFAVDEAHCISMWGHQ 149
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR++ LR+ P VPI A TATA +V++D++ L L +P SF+R NL Y V
Sbjct: 150 FRPEYREIKHLRDKFPGVPIAAFTATATLRVREDIVNELRLNDPAEFIGSFDRRNLRYSV 209
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
+ + S + A+ D I+YC R + +EL+ L I YHAGL
Sbjct: 210 FAEPNAQVRMQKIISYVTAHKDDPGIIYCFSRASTEELAERLRKVHIMANPYHAGLPTPE 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
RS V + ++++ +V+ ATVAFGMGID+ DVR V H ++PK +E++YQE+GRAGRD
Sbjct: 270 RSRVQEGFLNNSIRVICATVAFGMGIDKPDVRYVIHAHMPKDIESYYQETGRAGRDGKAG 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKI 303
+ LL+Y DRR++E +L + + +S RE+ QM YC CRR+ +
Sbjct: 330 ECLLFYSGGDRRKIENMLEREFTDKKKSEIAREK--------LDQMYAYCTAKSCRRQLL 381
Query: 304 LESFGEQIPVSLCKNSCDACKHPNL-LAKYLGELTSAVL 341
L F E+I C N CD C + +K G LT +L
Sbjct: 382 LSYFDEEI--QPCGN-CDTCGDKKIKQSKPAGSLTKMIL 417
>gi|436833691|ref|YP_007318907.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
gi|384065104|emb|CCG98314.1| ATP-dependent DNA helicase RecQ [Fibrella aestuarina BUZ 2]
Length = 742
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 196/342 (57%), Gaps = 27/342 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
TK+ +D +G +L+LLY+ PE + LKK +++ VAIDEAHCIS WGHDF
Sbjct: 104 TKVKKDTLNG--TLKLLYIAPESLTKEENLDFLKK----AVISFVAIDEAHCISEWGHDF 157
Query: 65 RPSYRKLSSLRNYLPD------VPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPN 118
RP YRK+ + + + +P++ALTATA PKVQ+D+ ++L +++ V K+SFNR N
Sbjct: 158 RPEYRKIRGIVDNIGHHSGRMGLPVIALTATATPKVQQDIQKNLNMEDADVFKTSFNRKN 217
Query: 119 LFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
L+YE++ K DA L +K N IVYCL R T ++++ L + YHAG
Sbjct: 218 LYYEIKPKV---DAKKALIKYVKHNKGKSGIVYCLSRKTAEDIAELLRVNDVRALPYHAG 274
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
L+ + R + D +++ VV AT+AFGMGID+ DVR V H++ PKS+E +YQE+GRAGR
Sbjct: 275 LDPQTRIANQDAFLNEEVDVVCATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAGR 334
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D L +++Y DD ++E K ++ ER + K + +MV Y C
Sbjct: 335 DGLEGNCIMFYSYDDIVKLE--------KFNKDKPVTERDNAKHL--LQEMVSYANLGVC 384
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPNLLAKYLGELTSAV 340
RR+++L FGE + C CD C P K E+ A+
Sbjct: 385 RRRQLLGYFGEYMEKD-C-GFCDNCLKPTPKFKAQAEIILAL 424
>gi|302337379|ref|YP_003802585.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
gi|301634564|gb|ADK79991.1| ATP-dependent DNA helicase RecQ [Spirochaeta smaragdinae DSM 11293]
Length = 601
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 186/319 (58%), Gaps = 20/319 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T+ Y L G+ ++LLY++PE A GF +L + ++L A+DEAHC+S WGHDF
Sbjct: 96 TETYRRLYRGE--IKLLYLSPERLAVDGFTERLAAFN----VSLFAVDEAHCLSEWGHDF 149
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y L+ LR P VPI A TATA +VQ+D++ L L++P +L++SFNR LFY+V
Sbjct: 150 RPDYLALAQLRTAFPTVPIAAFTATATVRVQEDIIRLLRLEDPFILRASFNRKELFYQVL 209
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + + + + A+ D IVY L R D+ YL GI YHAG++ R
Sbjct: 210 PKT---EVLSQIAQYIGAHPDQSGIVYRLSRKDTDKTVDYLGKLGIRALPYHAGMDKDER 266
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ + + + QV+VAT AFGMGID+ ++R V H ++PKSME +YQE+GRAGRD L S+
Sbjct: 267 ARNQERFNNDDVQVIVATTAFGMGIDKNNIRYVIHGDLPKSMEGYYQETGRAGRDGLESQ 326
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
+L++G D R+ + + + + Q ++S + +M + + CRRK+IL
Sbjct: 327 CILFFGTADIARLNYFIRQIEDPAEQ---------RRSRENLDRMARFASVNVCRRKQIL 377
Query: 305 ESFGEQIPVSLCKNSCDAC 323
E F E + C SCD C
Sbjct: 378 EYFNETFEGN-C-GSCDVC 394
>gi|329955315|ref|ZP_08296223.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328525718|gb|EGF52742.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 604
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 128/310 (41%), Positives = 180/310 (58%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLAEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHR 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D++ L L +P + SSF+RPNL V+ + +
Sbjct: 158 QFPQVPIIALTATADKITREDIIRQLHLNHPRIFISSFDRPNLSLTVKRGYRQKEKSKTI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKTESVAQMLQKQGIRTAVYHAGLSPARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQEGINLEKLQRMQQYAESDICRRRILLSYFGETADHD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|357445423|ref|XP_003592989.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
gi|355482037|gb|AES63240.1| ATP-dependent DNA helicase Q1 [Medicago truncatula]
Length = 1156
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 197/363 (54%), Gaps = 24/363 (6%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L+S +LLYVTPE A + + +L+ +H R LL+ + IDEAHC+S WGH
Sbjct: 487 QQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGH 546
Query: 63 DFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYE 122
DFRP Y+ L L+ P+ P+LALTATA V++DV+++L L N +V + SFNRPNL+Y
Sbjct: 547 DFRPDYQGLGVLKQKFPNTPVLALTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYS 606
Query: 123 VRYKDLLDDAYADLCSVLKANG-DTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
V K D+ ++ N D C I+YCL R C++++ L G CA YH ++
Sbjct: 607 VVPK--TKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDP 664
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
R+ V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE GRAGRD
Sbjct: 665 DQRAHVQRQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSVEGYHQECGRAGRDGQ 724
Query: 242 PS-----KSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
S K +L G ++ M S+ + NS R + + + +MV YCE
Sbjct: 725 RSSCIRVKHMLSVGAVEQSNMTSGYSRFNATNSG------RLLETNTENLLRMVSYCEND 778
Query: 297 -GCRRKKILESFGEQIPVSLCKNSCDAC--------KHPNLLAKYLGELTSAVLQKNHFS 347
CRR L FGE+ S C +CD C K +AK L EL QK S
Sbjct: 779 VDCRRLIQLVHFGEKFDSSNCHKTCDNCVKITSFVEKDVTEIAKQLVELVKLTGQKVSAS 838
Query: 348 QIF 350
I
Sbjct: 839 HIL 841
>gi|293373225|ref|ZP_06619587.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|292631873|gb|EFF50489.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
Length = 550
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 178/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L A ++ + I +L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 115 LKLLYISPEKLLAEKDYLLRDMNI------SLFAIDEAHCISQWGHDFRPEYTQMGVLHQ 168
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P +PI+ALTATA ++D++ L L +P + SSF+RPN+ V+ + +
Sbjct: 169 QFPQIPIVALTATADKITREDIVRQLHLNHPRIFISSFDRPNISLTVKRGFQAKEKNKAI 228
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ +G I+YC+ R + ++ L GI C YHAGL+ + R +D+I+ R
Sbjct: 229 LEFIHRHGGESGIIYCMSRNKTETVAQMLQKQGIRCGVYHAGLSTQHRDETQNDFINDRI 288
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD LPS ++L+Y + D
Sbjct: 289 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGLPSSTVLFYSLGDL-- 346
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F++ ++ +M Y E CRR+ +L FGE C
Sbjct: 347 --ILLTK--------FASESNQQNINLEKLQRMQQYAEADICRRRILLSYFGETTTED-C 395
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 396 GN-CDVCKNP 404
>gi|60682718|ref|YP_212862.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|60494152|emb|CAH08944.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
Length = 607
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 180/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L+LLY++PE +S+ + L+L A+DEAHCIS WGHDFRP Y ++ LRN
Sbjct: 110 LKLLYISPE-----KLLSEADYLLRDMTLSLFAVDEAHCISQWGHDFRPEYARMGFLRNQ 164
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P+VP++ALTATA ++D++ L L+ P + SSF+RPNL V+ + +
Sbjct: 165 FPNVPMIALTATADKITREDIVRQLQLRQPQIFISSFDRPNLSLSVKRGYQPKEKSKAII 224
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ + I+YC+ R+ + ++ L GI C YHAGL+ + R DD+I+ R +
Sbjct: 225 DFITRHRGESGIIYCMSRSKTETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIE 284
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD + S ++L+Y + D
Sbjct: 285 VVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDL--- 341
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+T ++ ++M Y E CRR+ +L FGE C
Sbjct: 342 -ILLTK--------FATESNQQNINLEKLNRMQQYAESDICRRRILLSYFGETTTED-CG 391
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 392 N-CDVCRNP 399
>gi|324502777|gb|ADY41219.1| ATP-dependent DNA helicase Q1 [Ascaris suum]
Length = 502
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 175/322 (54%), Gaps = 19/322 (5%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+I + L S RLLYVTPE L + M++L+K G L +VAIDE HC S WGHDF
Sbjct: 60 RIQKALTDPNSSFRLLYVTPEKLAKSKRVMNRLEKCAEMGRLKVVAIDEVHCCSQWGHDF 119
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP ++ L+ L+ VPIL LTATA V DV L + +V ++ FNRPNL+YEVR
Sbjct: 120 RPDFKFLNVLKRQFKGVPILGLTATATADVIDDVKNILSIPAAVVFRAGFNRPNLYYEVR 179
Query: 125 YKDLLDDAYAD-LCSVLKANGD-TCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDK 182
K + + D L S++ D I+YC R C++L+ L + I A YHA L
Sbjct: 180 NKPSSSEQFLDELVSLINDRFDGQSGIIYCFSRKECEDLTHALRSRKIKAAHYHAYLESD 239
Query: 183 ARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLP 242
RS + WI V+VATVAFGMGID+ DVR V H ++ KSME +YQESGRAGRD
Sbjct: 240 KRSRTHERWIGGEVDVIVATVAFGMGIDKTDVRYVIHHSMAKSMENYYQESGRAGRDGKQ 299
Query: 243 SKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYC-EGSGCRRK 301
+ +LYY + D R ST + K +S+ M+ YC + CRR
Sbjct: 300 ATCILYYRLGDLFRQ---------------STMVCTEKTGVSNLYSMLAYCIQRKECRRS 344
Query: 302 KILESFGEQIPVSLCKNSCDAC 323
I E F E SLC CD C
Sbjct: 345 LIAEHFNETFERSLCAQMCDIC 366
>gi|430808837|ref|ZP_19435952.1| ATP-dependent DNA helicase RecQ [Cupriavidus sp. HMR-1]
gi|429498733|gb|EKZ97235.1| ATP-dependent DNA helicase RecQ [Cupriavidus sp. HMR-1]
Length = 615
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 188/328 (57%), Gaps = 26/328 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+ + DL +G+ L +LYV PE TP F+ L++ + L AIDEAHC+S WGHDF
Sbjct: 100 SAVERDLLAGR--LDILYVAPERLMTPRFLDLLERTR----VGLFAIDEAHCVSQWGHDF 153
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y +LS L P VP +ALTATA +++++E L L V SSF+RPN+ Y +
Sbjct: 154 RPEYIQLSVLHERFPRVPRIALTATADALTRQEIVERLALDEASVFISSFDRPNIRYRII 213
Query: 125 YKDLLDDAYADLCSVLKA------NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
K D+A L + +KA G IVYCL R ++ +A+LS+ GI+ YHAG
Sbjct: 214 EK---DNARLQLLAFIKAEHMNATGGHDSGIVYCLSRKKVEDTAAWLSSHGINALGYHAG 270
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
++ + R + + V+VAT+AFGMGID+ DVR V H ++PKSME +YQE+GRAGR
Sbjct: 271 MDSQVRQTHQARFREEEGIVMVATIAFGMGIDKPDVRFVAHLDLPKSMEGYYQETGRAGR 330
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LP+ + + YG+ D + + ++ ++++ E + S S ++ CE +GC
Sbjct: 331 DGLPANAWMAYGLGDVVQQKRMIDESEAD--------EAHKRVSSSKLDALLGLCETAGC 382
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHP 326
RR +IL F E C N CD C P
Sbjct: 383 RRVRILAYFDET--AEPCGN-CDTCLEP 407
>gi|160940923|ref|ZP_02088263.1| hypothetical protein CLOBOL_05815 [Clostridium bolteae ATCC
BAA-613]
gi|158436167|gb|EDP13934.1| hypothetical protein CLOBOL_05815 [Clostridium bolteae ATCC
BAA-613]
Length = 822
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/307 (40%), Positives = 179/307 (58%), Gaps = 11/307 (3%)
Query: 20 LLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYLP 79
++YV PE + F+ + S+ +++VA+DEAHC+S WG DFRPSY K+ N LP
Sbjct: 109 IIYVAPERLMSEDFLRF--ALSSQVKISMVAVDEAHCVSQWGQDFRPSYLKIVDFINQLP 166
Query: 80 DVPIL-ALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLCS 138
+ P++ A TATA +V+ D+++ L L+NP V+ + FNRPNL++ V+ D YA + +
Sbjct: 167 ERPVVSAFTATATAEVRDDIIDILMLRNPQVMTTGFNRPNLYFGVQSPK---DKYATMVN 223
Query: 139 VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQV 198
L+ + I+YCL R +E+ L G S YHAGL+D R +D+I R Q+
Sbjct: 224 YLERHKGESGIIYCLTRKVVEEVCGQLIREGFSVTRYHAGLSDSERRHNQEDFIYDRAQI 283
Query: 199 VVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRME 258
+VAT AFGMGID+ +VR V H+N+PK+ME++YQE+GRAGRD PS+ +L YG D +
Sbjct: 284 MVATNAFGMGIDKSNVRFVVHYNMPKNMESYYQEAGRAGRDGEPSECILLYGGQDVVTNQ 343
Query: 259 FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCKN 318
F + NQ + TRE ++ +M YC + C R IL FGE N
Sbjct: 344 FFIDHNQDNEALDPITREIVMERDRERLRKMTFYCFTNECLRDYILRYFGE-----YGSN 398
Query: 319 SCDACKH 325
C C +
Sbjct: 399 YCGNCSN 405
>gi|392565993|gb|EIW59169.1| ATP-dependent DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 731
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 202/359 (56%), Gaps = 37/359 (10%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEA--------- 54
KTK+ +DL S PS+RLLY++PE TP L ++H+ LN + +DEA
Sbjct: 86 KTKVIQDLTSDDPSIRLLYISPEKFCTPEIRRILVQLHNADELNRLVVDEASETSTQARS 145
Query: 55 -HCISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCL-QNPLVLK- 111
+S WGHDFR YR+L S R+ P++PI+ALTATA VQ+DV+ SL + ++ L L
Sbjct: 146 LKRLSEWGHDFREEYRRLGSFRDKFPNIPIMALTATATEGVQQDVIRSLKMARDRLFLAL 205
Query: 112 SSFNRPNLFYEVRY------KDLLDDAYADLCSVLKANGD-TCAIVYCLERTTCDELSAY 164
FNR NL+YEVRY + D + + ++ + G + IVYC R C++L+A+
Sbjct: 206 HPFNRENLYYEVRYISSPNPNAHMIDVFEYINNLHERRGRASSGIVYCRTRAVCNDLAAF 265
Query: 165 LSAGGISCAAYHAGLNDKARSSVLDDW------ISSRKQVVVATVAFGMGIDRKDVRLVC 218
LS G+ AYH GL L W VV AT+AFGMGID+ DVR V
Sbjct: 266 LSKKGLQAKAYHRGLTPSVLDKTLRQWDEGGSGTHGGADVVCATIAFGMGIDKPDVRYVI 325
Query: 219 HFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSK---NSQSFSTR 275
HF++PKS E +YQE+G AGRD LP+K +L+Y +D R++ ++++ SK ++S +
Sbjct: 326 HFDLPKSFEGYYQETGIAGRDGLPAKCILFYSREDAHRVKRWVTESHSKRIVRAESNNGP 385
Query: 276 ERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVS-------LCKNSCDACKHP 326
E S+++ S +V+Y E + CR I FGE+I + C CD CK+P
Sbjct: 386 E-PSQRAADSLSALVNYAENAHLCRHVLICRYFGEKIDLQDPEATKKYCSKMCDVCKYP 443
>gi|347536771|ref|YP_004844196.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529929|emb|CCB69959.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium branchiophilum
FL-15]
Length = 731
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 182/306 (59%), Gaps = 20/306 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ D+ +GK +LLYV PE ++S L+ + L+ VAIDEAHCIS WGHDFR
Sbjct: 104 QVKSDIVAGKT--KLLYVAPESLTKEEYVSFLQTVP----LSFVAIDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P YR L ++ L DVPI+ LTATA PKVQ+D++++L + + K+SFNRPNLFYEVR
Sbjct: 158 PEYRNLKNIIKQLSDVPIIGLTATATPKVQEDILKNLDMPDAKTFKASFNRPNLFYEVRT 217
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K + +D+ +K N I+YCL R + ++ L GIS YHAGL+ K R+
Sbjct: 218 KT--KNIESDIIRFIKQNKGKSGIIYCLSRKKVESIAEVLKVNGISAVPYHAGLDAKTRA 275
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
D ++ +VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GR GRD
Sbjct: 276 KHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRGGRDGGEGHC 335
Query: 246 LLYYGMDDRRRME-FILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
L YY D ++E F+ K ++ F+ ++V Y E S RRK +L
Sbjct: 336 LAYYSYKDVEKLEKFLTGKPVAEQEIGFAL-----------LQEVVAYAETSMSRRKFLL 384
Query: 305 ESFGEQ 310
FGE+
Sbjct: 385 HYFGEE 390
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 198/334 (59%), Gaps = 18/334 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L S + +LLYVTPE A + + +L+ ++SRG L+ + IDEAHC+S WGH
Sbjct: 510 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 569
Query: 63 DFRPSYR-----KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRP 117
DFRP Y+ L L+ P P+LALTATA V++DV++ L L N ++ + SFNRP
Sbjct: 570 DFRPDYQFFIHQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRP 629
Query: 118 NLFYEV--RYKDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAA 174
NL Y V + K L+D + + + AN + C I+YCL R C++++A L G + +
Sbjct: 630 NLRYFVWPKTKKCLEDIH----NFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHTASH 685
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YH ++ + R+++ W R ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE G
Sbjct: 686 YHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 745
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSF----STRERSSKKSISDFSQMV 290
RAGRD S +L+Y D R++ ++++ ++ S S++E++ + + +MV
Sbjct: 746 RAGRDSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGGSSQEQALETHKENLLRMV 805
Query: 291 DYCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC 323
YCE CRR L FGE S C +CD C
Sbjct: 806 SYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNC 839
>gi|150397426|ref|YP_001327893.1| ATP-dependent DNA helicase RecQ [Sinorhizobium medicae WSM419]
gi|150028941|gb|ABR61058.1| ATP-dependent DNA helicase RecQ [Sinorhizobium medicae WSM419]
Length = 647
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/313 (41%), Positives = 174/313 (55%), Gaps = 23/313 (7%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L L+YVTPE T GF + + L AIDEAHC+S WGHDFRP YR L L
Sbjct: 152 TLDLIYVTPERAVTDGFAEMIAGAE----IALFAIDEAHCVSQWGHDFRPEYRGLGCLAE 207
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P+VP +ALTATA P + D++E L L V SSF+RPN+ YE+ +D L
Sbjct: 208 RFPNVPRIALTATADPHTRADLIERLALGAARVFTSSFDRPNIAYEIVERD---QPRQQL 264
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
L D IVYCL R ++ + +L+ GI YHAG++ R + D ++
Sbjct: 265 LRFLSRFKDASGIVYCLSRAKVEDTAEWLNTQGIRALPYHAGMDRALRDAHQDAFLKEEN 324
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD--- 253
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D
Sbjct: 325 LCLVATVAFGMGIDKPDVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQ 384
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPV 313
RRRM ++ + ER+ S ++ CE +GCRR+ +L FGE P
Sbjct: 385 RRRM-----IDEGGAPEEVKRIERAKLNS------LLAICETAGCRRQAVLAHFGEAHPG 433
Query: 314 SLCKNSCDACKHP 326
C + CD C P
Sbjct: 434 G-CGH-CDTCLKP 444
>gi|328545859|ref|YP_004305968.1| atp-dependent dna helicase [Polymorphum gilvum SL003B-26A1]
gi|326415599|gb|ADZ72662.1| Probable atp-dependent dna helicase protein [Polymorphum gilvum
SL003B-26A1]
Length = 620
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/312 (41%), Positives = 178/312 (57%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE AT GF ++ + + L AIDEAHC+S WGHDFRP Y L+SL
Sbjct: 123 LDLLYVTPERVATIGFARLMEGVP----IALFAIDEAHCVSQWGHDFRPEYLMLASLAER 178
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P ++D+ L L V +SF+RPN+ YE+ + + L
Sbjct: 179 YPGVPRVALTATADPHTREDIRLRLKLDTAQVFTTSFDRPNIRYEIVERA---NQRQQLL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + IVYCL R D+++ +L+ GI YHAGL + R + D ++
Sbjct: 236 DFLARHKGESGIVYCLSRAKVDDIAGWLTEKGIRALPYHAGLERETREANQDAFLLEESL 295
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
V+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD P+++ + YGM D R
Sbjct: 296 VLVATVAFGMGIDKPDVRFVAHLDLPSSVEAYYQETGRAGRDGAPAEAWMAYGMADMVQR 355
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM +++ + + + + + ++ CE +GCRR+ +L FGE P
Sbjct: 356 RRM---IAEGDAPDE--------VKRAETAKLNALLGICETAGCRRQALLAHFGEDYP-K 403
Query: 315 LCKNSCDACKHP 326
C N CD C P
Sbjct: 404 PCGN-CDTCLSP 414
>gi|86140388|ref|ZP_01058947.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85832330|gb|EAQ50779.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 733
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 180/309 (58%), Gaps = 25/309 (8%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPG--FMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
++ ED+ +G +LLYV PE LT F+ K ++ VAIDEAHCIS WGH
Sbjct: 104 QVKEDIANG--ITKLLYVAPESLTKEENVEFLRSQK-------ISFVAIDEAHCISEWGH 154
Query: 63 DFRPSYRKLSSL-RNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
DFRP YR L + + D+PI+A+TATA PKVQ+D+M++L + K+SFNRPNL+Y
Sbjct: 155 DFRPEYRNLRQIIKRIGDDIPIIAVTATATPKVQEDIMKNLGMSGANAFKASFNRPNLYY 214
Query: 122 EVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLND 181
E+R K + AD+ +K N I+YCL R +EL+ L GIS YHAGL+
Sbjct: 215 EIRPK--TKNVDADIIRFVKQNQGKSGIIYCLSRKRVEELAQVLQVNGISAVPYHAGLDA 272
Query: 182 KARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQL 241
K+R D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 273 KSRVKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGG 332
Query: 242 PSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRK 301
L YY D ++E +S E+ ++ ++V Y E S RRK
Sbjct: 333 EGHCLAYYSYKDIEKLEKFMSGK--------PVAEQEIGHAL--LQEVVAYAETSMSRRK 382
Query: 302 KILESFGEQ 310
IL FGE+
Sbjct: 383 FILHYFGEE 391
>gi|296115204|ref|ZP_06833845.1| putative ATP-dependent DNA helicase recQ [Gluconacetobacter
hansenii ATCC 23769]
gi|295978305|gb|EFG85042.1| putative ATP-dependent DNA helicase recQ [Gluconacetobacter
hansenii ATCC 23769]
Length = 623
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 189/324 (58%), Gaps = 19/324 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ DL SG+ L +LYV+PE +PG + +L SR L+++AIDEAHCIS+WGH+F
Sbjct: 112 ARVRSDLASGR--LDILYVSPERLLSPGMLERL----SRLTLSVIAIDEAHCISAWGHEF 165
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR L++L ++ P VP +ALTATA P+ Q D++E+L + + VLK+SF+RPNL VR
Sbjct: 166 RPEYRALATLPDHFPGVPRIALTATADPRTQSDILEALAMPDATVLKASFHRPNLDVVVR 225
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L +L + IVYC R + ++ L G A+HAGL+ +
Sbjct: 226 PK---TSELRQLVGILDRHKGEAGIVYCGSRNKTERIAKSLCDRGYVALAFHAGLSPVEK 282
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ L + S ++VAT+AFGMGIDR DVR V H ++P S E +YQ+ GRAGRD ++
Sbjct: 283 RAALMRFRSGEAVIIVATIAFGMGIDRPDVRTVVHLDMPSSPEGYYQQIGRAGRDGEAAE 342
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
++L YG DD R + L ++ + +Q R M+ E +GCR + +L
Sbjct: 343 TVLLYGGDDIARARYWLEQSNAPEAQRRIMSAR--------LEAMIALAETTGCRTEALL 394
Query: 305 ESFGEQIPVSLCKNSCDACKHPNL 328
FGE++ C + CD C++P +
Sbjct: 395 ACFGERLE-QPCGH-CDNCRNPAV 416
>gi|349702223|ref|ZP_08903852.1| ATP-dependent DNA helicase RecQ [Gluconacetobacter europaeus LMG
18494]
Length = 611
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 192/322 (59%), Gaps = 19/322 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++ DL +G+ L +LYV+PE +PG + +L ++ L+++AIDEAHCIS+WGH+F
Sbjct: 103 ARVRSDLMAGR--LDILYVSPERLLSPGMLERLGRL----TLSIIAIDEAHCISAWGHEF 156
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR+L++L + P+VP +ALTATA + + D++++L + + VLK+SF+RPNL V+
Sbjct: 157 RPEYRELAALPQHFPNVPRIALTATADARTRTDILDALAMPDATVLKASFHRPNLDIAVK 216
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L +L + +IVYC R+ + ++ L+ G +HAGL+ +
Sbjct: 217 PKT---SELRQLTGILDRHRGAASIVYCGSRSKTERIARSLAGKGYVALPFHAGLSPVEK 273
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ L + S V+VAT+AFGMGIDR DVR V H ++P S E +YQ+ GRAGRD ++
Sbjct: 274 RAALMRFRSGEPVVIVATIAFGMGIDRPDVRAVVHLDMPSSPEGYYQQIGRAGRDGEQAE 333
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
++L YG DD R + L ++ + +Q R M+ E +GCR + +L
Sbjct: 334 TVLLYGGDDMARARYWLEQSNAPEAQKRIMSAR--------LEAMIALTETTGCRTQALL 385
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE++P + C + CD C++P
Sbjct: 386 SCFGEELPAA-CGH-CDNCRNP 405
>gi|408370738|ref|ZP_11168512.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
gi|407743730|gb|EKF55303.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
Length = 733
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 131/320 (40%), Positives = 182/320 (56%), Gaps = 24/320 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ ED+ SG +LLYV PE ++ + + ++ VA+DEAHCIS WGHDFR
Sbjct: 104 QVKEDITSG--VTKLLYVAPESLTKEEYIEFFRTVK----ISFVAVDEAHCISEWGHDFR 157
Query: 66 PSYRKLSSLRNYL-PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
P YR + ++ L D+PI+ALTATA KVQ+D++++L + V K+SFNRPNL+YEVR
Sbjct: 158 PEYRNIRTIIQRLGDDIPIIALTATATEKVQEDILKNLGIGKANVFKASFNRPNLYYEVR 217
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + D+ +K N I+YCL R +EL+ L GI YHAGL+ K R
Sbjct: 218 PK--TKNVDVDIIRFVKQNTGKSGIIYCLSRKKVEELAQTLEVNGIKAVPYHAGLDAKTR 275
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D ++ VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD
Sbjct: 276 AKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGH 335
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKK 302
L +Y D ++E F + + +++ I MV Y E S RR
Sbjct: 336 CLAFYAYKDIEKLE------------KFMSGKPVAEQEIGHALLQDMVAYAETSMSRRMY 383
Query: 303 ILESFGEQI-PVSLCKNSCD 321
IL FGE+ PV+ S D
Sbjct: 384 ILHYFGEEFDPVTGEGASMD 403
>gi|160888701|ref|ZP_02069704.1| hypothetical protein BACUNI_01119 [Bacteroides uniformis ATCC 8492]
gi|156861600|gb|EDO55031.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
Length = 603
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 179/310 (57%), Gaps = 21/310 (6%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L+LLY++PE L ++ L+ +H ++L AIDEAHCIS WGHDFRP Y ++ L
Sbjct: 104 LKLLYISPEKLLVEANYL--LRDMH----ISLFAIDEAHCISQWGHDFRPEYTQMGILHQ 157
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P VPI+ALTATA ++D+++ L L P + SSF+RPNL V+ + +
Sbjct: 158 LFPQVPIIALTATADKITREDIIKQLHLNQPRIFISSFDRPNLSLTVKRGYQQKEKSKAI 217
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + I+YC+ R+ + ++ L GI A YHAGL+ R DD+I+ R
Sbjct: 218 LDFIARHPGESGIIYCMSRSKAETVAQMLQKQGIKSAVYHAGLSPARRDEAQDDFINDRV 277
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
QVV AT+AFGMGID+ +VR V H+N+PKS+E+FYQE GRAGRD +PS +LL+Y + D
Sbjct: 278 QVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMPSDTLLFYSLADL-- 335
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+L+K F+T ++ +M Y E CRR+ +L FGE C
Sbjct: 336 --ILLTK--------FATDSGQQSINLEKLQRMQQYAEADICRRRILLSYFGENTTCD-C 384
Query: 317 KNSCDACKHP 326
N CD CK+P
Sbjct: 385 GN-CDVCKNP 393
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 182/312 (58%), Gaps = 12/312 (3%)
Query: 17 SLRLLYVTPELTATPGFMSKL-KKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLR 75
++RLLY+TPE G L ++ + + +DEAHC+S WGHDFRP Y +L LR
Sbjct: 515 NIRLLYLTPEYIRQSGQAKTLFNDLYRQKKIARFIVDEAHCVSQWGHDFRPHYTELGELR 574
Query: 76 NYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD-DAYA 134
PDVPI+ALTATA +V KDV E L ++N + SFNRPNL Y+VR K + A
Sbjct: 575 LSYPDVPIMALTATANARVIKDVKECLRMKNVEHISQSFNRPNLEYQVRKKPKTNVKAME 634
Query: 135 DLCS-VLKANGDTCAIVYCLERTTCDELSAYLSAG-GISCAAYHAGLNDKARSSVLDDWI 192
++ S +L ++ C I+YC R +C+ ++ LS GIS YHA L+ R+ V W
Sbjct: 635 EISSLILTSHKGQCGIIYCFSRESCETVAHDLSTQYGISAHHYHAKLSADDRAMVQQRWQ 694
Query: 193 SSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMD 252
+ QV+VAT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD S +LYY
Sbjct: 695 KNEFQVIVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGKQSVCILYYSFG 754
Query: 253 DRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS-GCRRKKILESFGEQI 311
D +M ++ K + K + + +++ Q+ +C+ CRR ++L FGE
Sbjct: 755 DISKMRSMIEKEEGKT-------QEAKDRALESLDQISRFCKNEIDCRRVQVLRYFGEDF 807
Query: 312 PVSLCKNSCDAC 323
C ++CD C
Sbjct: 808 SPEGCASTCDNC 819
>gi|71030866|ref|XP_765075.1| DNA helicase [Theileria parva strain Muguga]
gi|68352031|gb|EAN32792.1| DNA helicase, putative [Theileria parva]
Length = 998
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/310 (42%), Positives = 183/310 (59%), Gaps = 5/310 (1%)
Query: 18 LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+ +L++TPE L + + L +HSR ++ IDE HC+S WG+DFRP Y +L +R
Sbjct: 302 ISILFITPESLVGSKILLENLLTMHSRNKISRFVIDEVHCVSQWGNDFRPHYGQLGMIRK 361
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDL-LDDAYAD 135
+ PDVPIL+LTATA V KDV+ L L++ ++ KS FNR NL Y V K A
Sbjct: 362 HFPDVPILSLTATATEYVTKDVIAKLMLKDVVIFKSDFNRKNLEYVVVEKSKHFKVAINQ 421
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L +++ D+C IVYCL + +SA LS I+C YHA L+ R++V +DWI+ R
Sbjct: 422 LVKLIQQFEDSCGIVYCLSCGEAERVSAELSRV-ITCFHYHAQLSTIVRTNVYNDWINDR 480
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
+V+VAT+AFGMGID+KDVR V HF++ KS+E ++QESGRAGRDQ S +L Y D +
Sbjct: 481 IKVIVATIAFGMGIDKKDVRFVVHFSVSKSIENYFQESGRAGRDQKKSTCILMYNYHDIQ 540
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIPVS 314
R + S + S+ T I M+DYCE CRR +L FG++ S
Sbjct: 541 RHFLLNSPLLLQPSKFTPTTTPEFDNKIDKILVMMDYCEEKILCRRFMLLGYFGQKF-TS 599
Query: 315 LCKNSCDACK 324
C CD CK
Sbjct: 600 KCLLPCDNCK 609
>gi|190348308|gb|EDK40739.2| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC
6260]
Length = 1176
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/325 (35%), Positives = 191/325 (58%), Gaps = 16/325 (4%)
Query: 18 LRLLYVTPEL-TATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L L+Y++PE+ A+ + + +++S L + +DEAHC+SSWGHDFRP Y+ ++ +
Sbjct: 615 LDLVYLSPEMVNASSQIQNIISRLNSNQQLARIVVDEAHCVSSWGHDFRPDYKGMNMFKQ 674
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
P++P++ALTATA KV+ D++ L + P++LK SFNR NLFYE++ K+ Y +
Sbjct: 675 QYPNIPLMALTATANEKVRMDIIHHLNMTEPVLLKQSFNRTNLFYEIKRKN---GNYLEW 731
Query: 137 CS--VLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISS 194
++ I+YC + +C++ S L+ G+ + YHAG+ R + W
Sbjct: 732 IRDYIVAKYAHNTGIIYCHSKQSCEQTSEKLNMWGLKTSFYHAGMGPTERFDIQKKWQDG 791
Query: 195 RKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDR 254
+++ AT+AFGMGID+ DVR V H IP+S+E +YQE+GRAGRD PS+ +++Y D
Sbjct: 792 SVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMFYSYKDA 851
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKS-ISDFSQMVDYCEGSG-CRRKKILESFGEQIP 312
R ++ ++ ++ S +R S+++ ++ Q+V YCE + CRRK++L F E
Sbjct: 852 RSLQSMIQRD--------SDLDRESRENHLNKLRQVVQYCENTTDCRRKQVLHYFNEHFD 903
Query: 313 VSLCKNSCDACKHPNLLAKYLGELT 337
C CD C + + + ++T
Sbjct: 904 PLQCSKKCDNCANSDTVTSVERDIT 928
>gi|380513575|ref|ZP_09856982.1| DNA helicase superfamily II protein [Xanthomonas sacchari NCPPB
4393]
Length = 602
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 179/309 (57%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYV PE TP F+S ++ R + L AIDEAHC+S WGHDFRP YR+L+ L
Sbjct: 108 LDLLYVAPERLLTPRFLSLIE----RSRIALFAIDEAHCVSQWGHDFRPEYRQLTVLHER 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P P +ALTATA P Q+++ E L L SSF+RPN+ Y V KD +A L
Sbjct: 164 WPQTPRIALTATADPPTQREIAERLDLAQARHFVSSFDRPNIRYTVVQKD---NARRQLL 220
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L+A+ + IVYC+ R +E + +L+ G++ YHAGL + R+ ++
Sbjct: 221 DFLRAHRGSAGIVYCMSRRKVEETADFLAREGLNALPYHAGLPAEVRADNQRRFLREDGI 280
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
V+ AT+AFGMGID+ DVR V H ++PKS+E +YQE+GRAGRD +++ L YG+ D
Sbjct: 281 VMCATIAFGMGIDKPDVRFVAHTDLPKSLEGYYQETGRAGRDGEAAEAWLCYGLGD---- 336
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L K + ++ R+R ++ + Q++ YCE CRR+ +L FGE P C
Sbjct: 337 -VVLLKQMIEQGEAGEERKRVERRKL---DQLLGYCESMQCRRQVLLAGFGETYPQP-CG 391
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 392 N-CDNCLQP 399
>gi|225010696|ref|ZP_03701166.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
gi|225005249|gb|EEG43201.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
Length = 647
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 173/294 (58%), Gaps = 21/294 (7%)
Query: 19 RLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNYL 78
+LLYV PE ++ L + ++ VA+DEAHCIS WGHDFRP YR L + + +
Sbjct: 115 KLLYVAPESLTKEENVAFLNTV----TVSFVAVDEAHCISEWGHDFRPEYRNLQRIIDRV 170
Query: 79 -PDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
++PI+ LTATA PKVQ+D++++L + + V KSSFNRPNLFYEVR K + AD+
Sbjct: 171 GANIPIIGLTATATPKVQEDIIKNLGITDATVFKSSFNRPNLFYEVRPKT--QNVEADII 228
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+K + I+YCL R +EL+ L G+S YHAG + K RS D ++
Sbjct: 229 RFVKQHVGKSGIIYCLSRKKVEELAQILQVNGVSAVPYHAGFDTKTRSKYQDMFLMEEVD 288
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VVVAT+AFGMGID+ DVR V H +IPKS+E++YQE+GRAGRD L +Y D ++
Sbjct: 289 VVVATIAFGMGIDKPDVRYVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKL 348
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISD--FSQMVDYCEGSGCRRKKILESFGE 309
E F + +++ I + ++V + E S RRK IL FGE
Sbjct: 349 E------------KFMAGKPVAEQEIGNALLQEIVGFAETSISRRKFILHYFGE 390
>gi|339021936|ref|ZP_08645916.1| DNA helicase RecQ [Acetobacter tropicalis NBRC 101654]
gi|338751063|dbj|GAA09220.1| DNA helicase RecQ [Acetobacter tropicalis NBRC 101654]
Length = 632
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 189/322 (58%), Gaps = 19/322 (5%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
KI DL +G+ + LLYV+PE PG + +L +R ++++AIDEAHCIS+WGH+F
Sbjct: 121 AKIRSDLANGR--IDLLYVSPERLLAPGTLERL----TRQTISVIAIDEAHCISAWGHEF 174
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP YR+L++L + P VP +ALTATA + + D++ +L + + VL SSF+RPNL
Sbjct: 175 RPEYRELAALPRHFPGVPRIALTATADQRTRADILSALDMPHARVLISSFHRPNLNIAAL 234
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K L +VL+ + + IVYC R + ++A L G + A+HAGL+ +
Sbjct: 235 PKA---SELRQLTTVLERHKEEACIVYCGSRARTERIAASLRERGWTALAFHAGLSPIEK 291
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ L + S V+VATVAFGMGIDR DVR V H ++P S EA+YQ+ GRAGRD LPS
Sbjct: 292 RAALLRFRSGEPIVIVATVAFGMGIDRPDVRAVIHLDMPASPEAYYQQIGRAGRDGLPSD 351
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
++L YG +D R + L ++ + ++ R R M+ E +GCR + +L
Sbjct: 352 TVLLYGGEDMARARYWLDQSNAPETEKRVMRAR--------LEAMIALTETTGCRTQALL 403
Query: 305 ESFGEQIPVSLCKNSCDACKHP 326
FGE + C + CD C+HP
Sbjct: 404 HCFGETL-NEPCGH-CDTCQHP 423
>gi|412985574|emb|CCO19020.1| predicted protein [Bathycoccus prasinos]
Length = 1352
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 188/337 (55%), Gaps = 22/337 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
++Y DL +P ++LLYVTPE L+ + ++ +K +H +G L IDEAHCISSWGHDF
Sbjct: 565 EVYNDLYGPEPKIKLLYVTPEKLSMSNKLINLMKSLHRKGRLQRFVIDEAHCISSWGHDF 624
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
R Y++L L++ PD+P++ALTATA +VQ D++ L L N + ++FNR N+ YEV
Sbjct: 625 RKDYKELRVLKHQFPDIPVMALTATATVRVQDDIVRQLGLANCVRFFTTFNRTNITYEVI 684
Query: 125 YKDLLDDAYADLCSVLKANGDT-------CAIVYCLERTTCDELSAYLS---------AG 168
K ++ S++ G C IVYC + C++++ L
Sbjct: 685 PKKKEKQNVEEILSLIHDRGFVDRRGRVECGIVYCFSKNDCEKMANALCLKNNQDSRFRH 744
Query: 169 GISCAAYHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEA 228
GI YHAGL+DK R + + W + ++ AT+AFGMGI++ DVR V H ++PKS+EA
Sbjct: 745 GIKALPYHAGLDDKVRKAHQEAWTNDTCNIICATIAFGMGINKPDVRYVFHHSMPKSLEA 804
Query: 229 FYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQ 288
++QESGRAGRD + +L+Y D + +L + K++ + +
Sbjct: 805 YHQESGRAGRDGEKALCVLFYSWGDVTKARSMLIDSAEKDNAPHEVK----MNKLESLVT 860
Query: 289 MVDYCEGSG-CRRKKILESFGEQIPVSLCKNSCDACK 324
M YCE + CRR ++L F E S CK CD C+
Sbjct: 861 MCTYCENTADCRRTQLLRHFNENFDRSRCKGMCDCCQ 897
>gi|94312259|ref|YP_585469.1| ATP-dependent DNA helicase [Cupriavidus metallidurans CH34]
gi|93356111|gb|ABF10200.1| ATP-dependent DNA helicase [Cupriavidus metallidurans CH34]
Length = 630
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 188/328 (57%), Gaps = 26/328 (7%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
+ + DL +G+ L +LYV PE TP F+ L++ + L AIDEAHC+S WGHDF
Sbjct: 115 SAVERDLLAGR--LDILYVAPERLMTPRFLDLLERTR----VGLFAIDEAHCVSQWGHDF 168
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y +LS L P VP +ALTATA +++++E L L V SSF+RPN+ Y +
Sbjct: 169 RPEYIQLSVLHERFPRVPRIALTATADALTRQEIVERLALDEASVFISSFDRPNIRYRII 228
Query: 125 YKDLLDDAYADLCSVLKA------NGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
K D+A L + +KA G IVYCL R ++ +A+LS+ GI+ YHAG
Sbjct: 229 EK---DNARQQLLAFIKAEHMNATGGHDSGIVYCLSRKKVEDTAAWLSSHGINALGYHAG 285
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
++ + R + + V+VAT+AFGMGID+ DVR V H ++PKSME +YQE+GRAGR
Sbjct: 286 MDSQIRQTHQARFREEEGIVMVATIAFGMGIDKPDVRFVAHLDLPKSMEGYYQETGRAGR 345
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGC 298
D LP+ + + YG+ D + + ++ ++++ E + S S ++ CE +GC
Sbjct: 346 DGLPANAWMAYGLGDVVQQKRMIDESEAD--------EAHKRVSSSKLDALLGLCETAGC 397
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHP 326
RR +IL F E C N CD C P
Sbjct: 398 RRVRILAYFDET--AEPCGN-CDTCLEP 422
>gi|68477651|ref|XP_717138.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
gi|68477814|ref|XP_717059.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438838|gb|EAK98163.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
Length = 1189
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 187/315 (59%), Gaps = 16/315 (5%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE M + K+++ L V IDEAHC+SSWGHDFRP Y+ L ++
Sbjct: 560 LDIVYLSPERANKSNAMQTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKD 619
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD---LLDDAY 133
P VPI+ALTATA KVQ D++ +L +++P++LK SFNR NLFYE++ K LL+
Sbjct: 620 KFPKVPIMALTATANEKVQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSNCLLE--I 677
Query: 134 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
D +L I+YC + +C+ S L+ G+ + YHAG++ R ++ W
Sbjct: 678 KDY--ILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQE 735
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
++ QV+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S+ ++YY D
Sbjct: 736 NKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKD 795
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIP 312
R ++ ++ +++ E + ++ Q++ YCE + CRRK++L+ F E
Sbjct: 796 ARSLQNLIQRDE-------ELSESGRESHLAKLRQVIQYCENTTDCRRKQVLQYFNETFD 848
Query: 313 VSLCKNSCDACKHPN 327
+ C CD C+ N
Sbjct: 849 PANCHKQCDNCRDYN 863
>gi|378826718|ref|YP_005189450.1| DNA helicase [Sinorhizobium fredii HH103]
gi|365179770|emb|CCE96625.1| DNA helicase [Sinorhizobium fredii HH103]
Length = 620
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE T GF + + + L AIDEAHC+S WGHDFRP YR L+ L +
Sbjct: 123 LDLLYVTPERAVTDGFAEMIGDMD----IALFAIDEAHCVSQWGHDFRPEYRGLNCLASR 178
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA + D++E L LQ V +SF+RPN+ YE+ +D L
Sbjct: 179 FPGVPRVALTATADHHTRDDIIERLALQGARVFTTSFDRPNIAYEIVERD---QPRQQLL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L D+ IVYCL R ++ + +L+ GI YHAG++ R D ++
Sbjct: 236 RFLSRFKDSSGIVYCLSRAKVEDTAEWLTGQGIRALPYHAGMDRALRDRHQDAFLKEENL 295
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD---R 254
+VATVAFGMGID+ DVR V H ++P S+EA+YQE+GRAGRD LPS+ + YGM D R
Sbjct: 296 CLVATVAFGMGIDKPDVRYVAHLDMPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQR 355
Query: 255 RRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVS 314
RRM ++ ERS S ++ CE GCRR+ IL FGE P
Sbjct: 356 RRM-----IDEGGAPDEIKRIERSKLNS------LLAICETVGCRRQAILAHFGEAHP-G 403
Query: 315 LCKNSCDACKHP 326
C + CD C P
Sbjct: 404 RCSH-CDTCLKP 414
>gi|238883901|gb|EEQ47539.1| hypothetical protein CAWG_06119 [Candida albicans WO-1]
Length = 1195
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 187/315 (59%), Gaps = 16/315 (5%)
Query: 18 LRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
L ++Y++PE M + K+++ L V IDEAHC+SSWGHDFRP Y+ L ++
Sbjct: 566 LDIVYLSPERANKSNAMQTIMTKLYNNNQLARVVIDEAHCLSSWGHDFRPDYQGLGFFKD 625
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKD---LLDDAY 133
P VPI+ALTATA KVQ D++ +L +++P++LK SFNR NLFYE++ K LL+
Sbjct: 626 KFPKVPIMALTATANEKVQMDILHNLKMKDPVLLKQSFNRTNLFYEIKLKKSNCLLE--I 683
Query: 134 ADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWIS 193
D +L I+YC + +C+ S L+ G+ + YHAG++ R ++ W
Sbjct: 684 KDY--ILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHAGMSADKRFNIQKRWQE 741
Query: 194 SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDD 253
++ QV+ AT+AFGMGID+ DVR V H +P+++E +YQE+GRAGRD S+ ++YY D
Sbjct: 742 NKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKD 801
Query: 254 RRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFGEQIP 312
R ++ ++ +++ E + ++ Q++ YCE + CRRK++L+ F E
Sbjct: 802 ARSLQNLIQRDE-------ELSESGRESHLAKLRQVIQYCENTTDCRRKQVLQYFNETFD 854
Query: 313 VSLCKNSCDACKHPN 327
+ C CD C+ N
Sbjct: 855 PANCHKQCDNCRDYN 869
>gi|87125637|ref|ZP_01081482.1| DEAD/DEAH box helicase:Helicase C-terminal domain [Synechococcus
sp. RS9917]
gi|86166937|gb|EAQ68199.1| DEAD/DEAH box helicase:Helicase C-terminal domain [Synechococcus
sp. RS9917]
Length = 499
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 183/327 (55%), Gaps = 15/327 (4%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHD 63
+ ++ DL SG +LRLLY+ PE +P + G L +A+DEAHCIS+WGHD
Sbjct: 95 RQAVFRDLASG--ALRLLYLAPERLQSPTIKGVIASTAQAGHLVALAVDEAHCISAWGHD 152
Query: 64 FRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV 123
FRP YR+L +R + P VP++AL+ATAAP+V+ D++ L LQ PLV S R NL Y +
Sbjct: 153 FRPDYRRLGEIRAHCPGVPVVALSATAAPQVRADILRLLALQQPLVQVGSARRDNLHYAM 212
Query: 124 RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKA 183
R + D D+ + LKA A++Y R + ++ + L A GI YHAGL +
Sbjct: 213 RRRA--KDPLPDVLAALKAT-RGAALIYARTRRSVEQWAERLCAQGIEAIPYHAGLEPEV 269
Query: 184 RSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPS 243
R L ++ + V+VATVAFGMG+DR DV LV H N+P + E + QESGRAGRD LP+
Sbjct: 270 RQQALRHFLETEHPVLVATVAFGMGVDRPDVGLVLHLNLPATPEGYLQESGRAGRDGLPA 329
Query: 244 KSLLYYGMDDRRRMEFILSKNQSKNSQSF-------STRERSSKKSISDFSQMVDYCEGS 296
+ L+ + DR + + + + ++ S R +++ +M EG
Sbjct: 330 QCLVLFSPGDRTSLGWAMQTSWRRSGAVLGAASLDDSDDRRRLEQAQQKLRRMEAVAEGE 389
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDAC 323
CR++ +L + GE VSL CD C
Sbjct: 390 QCRQQALLLAVGE---VSLPCGRCDRC 413
>gi|288924568|ref|ZP_06418505.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
gi|288338355|gb|EFC76704.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
Length = 740
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 182/330 (55%), Gaps = 24/330 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPEL-----TATPGFMSKLKKIHSRGL----LNLVAIDEAHC 56
++ D+ SG+ +LLYV PE A G KK+ L ++ A+DEAHC
Sbjct: 103 RVKTDVLSGRT--KLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEEVKISFYAVDEAHC 160
Query: 57 ISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNR 116
IS WGHDFRP YR + + L PI+ALTATA KV+ D+ ++L + + KSSFNR
Sbjct: 161 ISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKVRTDIKKTLGISDAKEFKSSFNR 220
Query: 117 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
NL+YEVR K D + +K + I+YCL R +EL+A L I A YH
Sbjct: 221 SNLYYEVRQKSA--DIDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYH 278
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AGL+ RS DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRA
Sbjct: 279 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 338
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD L++Y D +++E + + ++ Q + K+ Y E S
Sbjct: 339 GRDGGEGYCLVFYSPKDLKKLEKFM-EGKAVAEQDIGRQLLQETKA---------YAESS 388
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHP 326
CRRK +L FGE+ C CD C HP
Sbjct: 389 VCRRKMLLHYFGEEYTKDNC-GMCDNCLHP 417
>gi|315607430|ref|ZP_07882426.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
gi|315250862|gb|EFU30855.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
Length = 740
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 182/330 (55%), Gaps = 24/330 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPEL-----TATPGFMSKLKKIHSRGL----LNLVAIDEAHC 56
++ D+ SG+ +LLYV PE A G KK+ L ++ A+DEAHC
Sbjct: 103 RVKTDVLSGRT--KLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEEVKISFYAVDEAHC 160
Query: 57 ISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNR 116
IS WGHDFRP YR + + L PI+ALTATA KV+ D+ ++L + + KSSFNR
Sbjct: 161 ISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKVRTDIKKTLGISDAKEFKSSFNR 220
Query: 117 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
NL+YEVR K D + +K + I+YCL R +EL+A L I A YH
Sbjct: 221 SNLYYEVRQKSA--DIDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYH 278
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AGL+ RS DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRA
Sbjct: 279 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 338
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD L++Y D +++E + + ++ Q + K+ Y E S
Sbjct: 339 GRDGGEGYCLVFYSPKDLKKLEKFM-EGKAVAEQDIGRQLLQETKA---------YAESS 388
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHP 326
CRRK +L FGE+ C CD C HP
Sbjct: 389 VCRRKMLLHYFGEEYTKDNC-GMCDNCLHP 417
>gi|253702373|ref|YP_003023562.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
gi|251777223|gb|ACT19804.1| ATP-dependent DNA helicase RecQ [Geobacter sp. M21]
Length = 599
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 124/321 (38%), Positives = 186/321 (57%), Gaps = 20/321 (6%)
Query: 6 KIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFR 65
++ L +G+ L+LLYV PE + GF+ ++K + ++L AIDEAHC+S WGHDFR
Sbjct: 98 RVLAQLHAGE--LKLLYVAPERLLSDGFLERIKPLS----ISLFAIDEAHCVSQWGHDFR 151
Query: 66 PSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRY 125
P Y +L LR P++P++ALTATA + + D++ L LQ + F+RPN+ Y V
Sbjct: 152 PEYAQLGVLREIFPEIPMIALTATADAQTRGDILSRLGLQGATCYCAGFDRPNIRYSVID 211
Query: 126 KDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARS 185
K+ + L L + D IVY L R +E++ L A GI AAYHAGL DK R
Sbjct: 212 KN---KPFNQLTGFLSSRKDEAGIVYALSRKRVEEVARKLCAAGIKAAAYHAGLPDKERH 268
Query: 186 SVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKS 245
V + ++ ++VVATVAFGMGID+ +VR V H+++PKS+E++YQE+GRAGRD LP+ +
Sbjct: 269 RVQEAFLKDDIKIVVATVAFGMGIDKSNVRFVVHYDMPKSIESYYQETGRAGRDGLPADA 328
Query: 246 LLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILE 305
LL +G D ++ + ++ + + M + E CRR+ +L
Sbjct: 329 LLLFGYGDVAVARGLIGNGGNAE---------QNRIELHKLNCMTGFAEAQTCRRRVLLG 379
Query: 306 SFGEQIPVSLCKNSCDACKHP 326
FG+++ C N CD C+ P
Sbjct: 380 YFGDRLEQD-CGN-CDICESP 398
>gi|168052509|ref|XP_001778692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669907|gb|EDQ56485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/336 (38%), Positives = 198/336 (58%), Gaps = 21/336 (6%)
Query: 2 QVKTKIYEDLDSGKPSLRLLYVTPELTATPGFMSK-LKKIHSRGLLNLVAIDEAHCISSW 60
Q + +I +LD+G +LLYVTPE A +S+ L ++ + LL + +DEAHC+S W
Sbjct: 91 QEQNEILRNLDAG--VYKLLYVTPEKIARSDRLSQHLTSLYDQRLLARIVVDEAHCVSQW 148
Query: 61 GHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLF 120
GHDFRP Y+ L + PDVP++ALTATA V++DV+ +L L ++ + +FNRPNL
Sbjct: 149 GHDFRPDYQNLGVFKERFPDVPLIALTATATLSVKEDVVRALKLTRCIIFRQTFNRPNLR 208
Query: 121 YEV--RYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAG 178
YEV + K L+D + + + + I+YCL R+ C++++ L G A YH
Sbjct: 209 YEVLPKSKKCLEDIDK---FIRERHPNESGIIYCLSRSDCEKVTEKLREFGHKVAFYHGQ 265
Query: 179 LNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGR 238
++ RS V W ++ ATVAFGMGI++ DVR V H ++PKS+E ++QESGRAGR
Sbjct: 266 MDPDERSYVQRMWSKDEVNIICATVAFGMGINKPDVRFVIHHSLPKSLEGYHQESGRAGR 325
Query: 239 DQLPSKSLLYYGMDDRRRMEFILSKNQS---------KNSQSFSTRERSSKKSISDFSQM 289
D LP+ +LYY D R++ +L++ + +N + ++ + S+ ++ + ++M
Sbjct: 326 DNLPASCILYYTYADSIRLKHMLTQGAAELGSTGSSFRNHNTVTSNQLST--NLDNLNRM 383
Query: 290 VDYCEGS-GCRRKKILESFGEQ-IPVSLCKNSCDAC 323
+ YC+ CRR L FGE VS CK +CD C
Sbjct: 384 IGYCQNDIDCRRSLQLAHFGEMDFDVSSCKGTCDNC 419
>gi|374316651|ref|YP_005063079.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352295|gb|AEV30069.1| ATP-dependent DNA helicase RecQ [Sphaerochaeta pleomorpha str.
Grapes]
Length = 619
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/321 (38%), Positives = 193/321 (60%), Gaps = 20/321 (6%)
Query: 5 TKIYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDF 64
T+IY L + ++LLY++PE A G++ L+ ++ ++ AIDEAHC+S WGHDF
Sbjct: 115 TEIYARLH--RNEIKLLYISPERLAIDGYLQWLQTLN----ISFFAIDEAHCLSEWGHDF 168
Query: 65 RPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVR 124
RP Y L+ +R+ P VP+ TATA +VQ D++ L +++PL +++SFNR L+YEVR
Sbjct: 169 RPDYLSLAQIRDAFPTVPLAGFTATATQQVQDDIIRILKMRDPLTVRASFNRKELYYEVR 228
Query: 125 YKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKAR 184
K + AD +K + + IVY + R ++ +AYL GI YHAGL+ + R
Sbjct: 229 QKTEILSQIADF---IKLHSEESGIVYRISRKDVEKTAAYLKTQGIKALYYHAGLSREER 285
Query: 185 SSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK 244
+ D + + + V+VAT+AFGMGID+ ++R V H ++ K+ME +YQE+GRAGRD L S
Sbjct: 286 AKNQDLFNNDKADVIVATIAFGMGIDKSNIRYVIHGDLSKNMEGYYQETGRAGRDGLASD 345
Query: 245 SLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKIL 304
++++G D R ++ + + + Q +K+ + +++V + CRRK+IL
Sbjct: 346 CIMFFGAGDVARQQYFIEQIEDPAEQ---------EKAKASLNRIVRFATVQVCRRKQIL 396
Query: 305 ESFGEQIPVSLCKNSCDACKH 325
E FGE + CK SCD C +
Sbjct: 397 EYFGEAHEGN-CK-SCDVCNN 415
>gi|402307191|ref|ZP_10826218.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
gi|400379031|gb|EJP31880.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
Length = 740
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 133/330 (40%), Positives = 182/330 (55%), Gaps = 24/330 (7%)
Query: 6 KIYEDLDSGKPSLRLLYVTPEL-----TATPGFMSKLKKIHSRGL----LNLVAIDEAHC 56
++ D+ SG+ +LLYV PE A G KK+ L ++ A+DEAHC
Sbjct: 103 RVKTDVLSGRT--KLLYVAPESLLKDDEACEGGGQGAKKVKFSFLEEVKISFYAVDEAHC 160
Query: 57 ISSWGHDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNR 116
IS WGHDFRP YR + + L PI+ALTATA KV+ D+ ++L + + KSSFNR
Sbjct: 161 ISEWGHDFRPEYRNIRKAIDILGRAPIIALTATATDKVRTDIKKTLGISDAKEFKSSFNR 220
Query: 117 PNLFYEVRYKDLLDDAYADLCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYH 176
NL+YEVR K D + +K + I+YCL R +EL+A L I A YH
Sbjct: 221 SNLYYEVRQKSA--DIDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYH 278
Query: 177 AGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRA 236
AGL+ RS DD++ R V+VAT+AFGMGID+ DVR V H++IPKS+E +YQE+GRA
Sbjct: 279 AGLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 338
Query: 237 GRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGS 296
GRD L++Y D +++E + + ++ Q + K+ Y E S
Sbjct: 339 GRDGGEGYCLVFYSPKDLKKLEKFM-EGKAVAEQDIGRQLLQETKA---------YAESS 388
Query: 297 GCRRKKILESFGEQIPVSLCKNSCDACKHP 326
CRRK +L FGE+ C CD C HP
Sbjct: 389 VCRRKMLLHYFGEEYTKDNC-GMCDNCLHP 417
>gi|222628902|gb|EEE61034.1| hypothetical protein OsJ_14872 [Oryza sativa Japonica Group]
Length = 2486
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 198/334 (59%), Gaps = 18/334 (5%)
Query: 4 KTKIYEDLDSGKPSLRLLYVTPELTA-TPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGH 62
+ +I +L S + +LLYVTPE A + + +L+ ++SRG L+ + IDEAHC+S WGH
Sbjct: 1823 QQEILRELMSPTCTYKLLYVTPEKIAKSDALLRQLENLYSRGHLSRIVIDEAHCVSQWGH 1882
Query: 63 DFRPSYR-----KLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRP 117
DFRP Y+ L L+ P P+LALTATA V++DV++ L L N ++ + SFNRP
Sbjct: 1883 DFRPDYQFFIHQHLGILKQKFPQTPVLALTATATASVKEDVVQVLGLANCIIFRQSFNRP 1942
Query: 118 NLFYEV--RYKDLLDDAYADLCSVLKANGDT-CAIVYCLERTTCDELSAYLSAGGISCAA 174
NL Y V + K L+D + + + AN + C I+YCL R C++++A L G + +
Sbjct: 1943 NLRYFVWPKTKKCLEDIH----NFIHANHNKECGIIYCLSRMDCEKVAAKLREYGHTASH 1998
Query: 175 YHAGLNDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESG 234
YH ++ + R+++ W R ++ ATVAFGMGI++ DVR V H ++PKS+E ++QE G
Sbjct: 1999 YHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 2058
Query: 235 RAGRDQLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSF----STRERSSKKSISDFSQMV 290
RAGRD S +L+Y D R++ ++++ ++ S S++E++ + + +MV
Sbjct: 2059 RAGRDSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTSAPRGGSSQEQALETHKENLLRMV 2118
Query: 291 DYCEGS-GCRRKKILESFGEQIPVSLCKNSCDAC 323
YCE CRR L FGE S C +CD C
Sbjct: 2119 SYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNC 2152
>gi|422021069|ref|ZP_16367583.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
gi|414099974|gb|EKT61607.1| ATP-dependent DNA helicase RecQ [Providencia sneebia DSM 19967]
Length = 608
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 183/313 (58%), Gaps = 26/313 (8%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLYV PE T F+S L S + L A+DEAHCIS WGHDFRP YR + LR +
Sbjct: 116 IKLLYVAPERLLTDYFLSHL----SNWNVALFAVDEAHCISQWGHDFRPEYRGMGQLRQH 171
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEV--RYKDLLDDAYAD 135
PDVP++ALTATA + D++ L LQ+PL+ SSF+RPN+ Y + +YK L
Sbjct: 172 FPDVPVMALTATADETTRADIIRRLDLQDPLIQISSFDRPNIRYTLVEKYKPL-----DQ 226
Query: 136 LCSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSR 195
L +KA IVYC R +E + L G++ AYHAGL+++ R V D ++
Sbjct: 227 LWFFIKAQKGKAGIVYCNSRNKVEETAERLKKRGLTVEAYHAGLDNQQREWVQDAFLKDN 286
Query: 196 KQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRR 255
Q+VVATVAFGMGI++ +VR V HF+IP+++EA+YQE+GRAGRD + ++++L+Y D
Sbjct: 287 IQIVVATVAFGMGINKSNVRFVAHFDIPRNIEAYYQETGRAGRDGVEAEAILFYDPADMA 346
Query: 256 RMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGE--QIPV 313
+ L + + Q ER +I+ F+ E CRR +L FGE Q P
Sbjct: 347 WLRRCLEEKPAGMHQDI---ERHKLNAIAAFA------EAQTCRRLVLLNYFGENRQTP- 396
Query: 314 SLCKNSCDACKHP 326
C N CD C P
Sbjct: 397 --CGN-CDICLDP 406
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 179/310 (57%), Gaps = 19/310 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
RLLY PE PGF+ L+ + + +AIDEAHCIS WGHDFRP YR+L+ LR
Sbjct: 110 FRLLYAAPERLMLPGFVDNLRAWN----VTQIAIDEAHCISEWGHDFRPEYRQLADLRET 165
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
LPDVP++ALTATA +V+ D++E L L++P +SFNRPNL Y V + Y +
Sbjct: 166 LPDVPMMALTATATERVRADIIERLRLRDPRCYTASFNRPNLTYRVVPR---AQPYDQVL 222
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ L++ I+YC R + ++ L+ IS YHAGL + R + ++ +
Sbjct: 223 AFLRSRPGESGIIYCSSRKATESVAERLADDRISAKPYHAGLTAEERGRHQELFLRDEVR 282
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSK-SLLYYGMDDRRR 256
V+ AT+AFGMGI++ +VR V H+++PK++E +YQE+GRAGRD LP + LL+ D ++
Sbjct: 283 VICATIAFGMGINKPNVRFVLHYDLPKNIEGYYQETGRAGRDGLPGECVLLFSAADVVKQ 342
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
FI K + ER + + QMV + E S CRR ++L FGE+ P C
Sbjct: 343 TSFIEEKTDPE--------ERRIAR--AQLQQMVHFAESSACRRVELLGYFGEEWPDENC 392
Query: 317 KNSCDACKHP 326
CD C P
Sbjct: 393 -GGCDNCLTP 401
>gi|56207957|emb|CAI21096.1| novel protein similar to vertebrate RecQ protein-like DNA helicase
Q1-like (RECQL) [Danio rerio]
Length = 639
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/319 (40%), Positives = 178/319 (55%), Gaps = 20/319 (6%)
Query: 12 DSGKPSLRLLYVTPELTATPGF-MSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRK 70
D P +LLYVTPE A MSKL+K + GLL +A+DE HC S WGHDFRP Y+
Sbjct: 185 DKNSP-FKLLYVTPEKIAKSKLLMSKLEKAFNMGLLARIAVDEVHCCSQWGHDFRPDYKL 243
Query: 71 LSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLD 130
L L+ P+VP++ LTATA V KD + LC+Q P+ L + FNRPNL+YEVR+KD +
Sbjct: 244 LGILKRQFPNVPLIGLTATATSNVLKDCQKILCVQEPVTLTAPFNRPNLYYEVRFKD-NE 302
Query: 131 DAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLD 189
D + S+++ + IVY + + ++ L I YHA + +S V
Sbjct: 303 DCTDQIASLIRGRYKNQSGIVYVFSQKDAEVVATELQKRDIVAQPYHANMEPSHKSLVHQ 362
Query: 190 DWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYY 249
W S + QVVVATVAFGMGID+ DVR V H I KS+E +YQESGRAGRD P+ ++++
Sbjct: 363 RWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVFF 422
Query: 250 GMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSG-CRRKKILESFG 308
G D R+ ++ E + ++ + + MV YC+ S CRR + F
Sbjct: 423 GFMDIFRISTMV------------VMENTGQQKLHN---MVAYCQNSSRCRRAMMAIHFD 467
Query: 309 EQIPVSLCKNSCDACKHPN 327
E C CD C+H N
Sbjct: 468 EVWNDEECNEMCDVCRHGN 486
>gi|358056819|dbj|GAA97169.1| hypothetical protein E5Q_03845 [Mixia osmundae IAM 14324]
Length = 780
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 192/348 (55%), Gaps = 27/348 (7%)
Query: 7 IYEDLDSGKPSLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRP 66
I D+ SG P RLLYVTPE A F L+ +++ G L+ + IDEAHCIS WG DFRP
Sbjct: 124 ILRDMHSGHPKTRLLYVTPERIALISFQRVLRVLYNHGELSRLVIDEAHCISQWGKDFRP 183
Query: 67 SYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLV--LKSSFNRPNLFYEVR 124
Y +L R P VPI+ALTA+A PKV D++ SL L + + SFNR L+YEV
Sbjct: 184 DYAQLGLFRQLFPRVPIMALTASATPKVADDIITSLNLHENTLRRFEQSFNRAELYYEVA 243
Query: 125 YKDLLDDAYAD-----LCSVLKANGD-----TCAIVYCLERTTCDELSAYLSAGGISCAA 174
Y + + + + KA D I+YC + TCD+L+A+L A GI+
Sbjct: 244 YVNAGPEQKRQQILEYIKKMTKARRDEPPPIISGIIYCRAKQTCDDLAAWLDAQGIAAKP 303
Query: 175 YHAGLNDKARSSVLDDWIS---------SRKQVVVATVAFGMGIDRKDVRLVCHFNIPKS 225
YH + +K ++ W++ +R VVVATV FGMGID+ R V H+++P S
Sbjct: 304 YHRDVTEKELTTTQYQWLNNEQLASESKTRVDVVVATVKFGMGIDKASCRYVIHYDLPTS 363
Query: 226 MEAFYQESGRAGRDQLPSKSLLYYGMDDRRRMEFILSKN-QSKNSQSFSTRERSSKKSIS 284
E +YQESGRAGRD ++ L++Y D R++ ++S + +++N+ + S++ ++
Sbjct: 364 FEGYYQESGRAGRDGNIARCLIFYDRMDAARLQHLISASMKARNAHAAKVGVPSTQGLVT 423
Query: 285 DFSQMVDYCEG-SGCRRKKILESFGEQIP----VSLCKNSCDACKHPN 327
+++YCE + CR + I FGE I LC CD CK P
Sbjct: 424 SSDSVINYCENVTTCRHEVIARYFGETIDEANVARLCHQMCDVCKFPE 471
>gi|71987997|ref|NP_001022657.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
gi|351065879|emb|CCD61880.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
Length = 608
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 184/329 (55%), Gaps = 20/329 (6%)
Query: 4 KTKIYEDLDSGKPS-LRLLYVTPE-LTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWG 61
+ K ED + K S RLLYVTPE L + M+KL+K S G L L+AIDE HC S WG
Sbjct: 164 EAKRVEDAITNKDSKFRLLYVTPEKLAKSKKMMNKLEKSLSVGFLKLIAIDEVHCCSQWG 223
Query: 62 HDFRPSYRKLSSLRNYLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFY 121
HDFR Y L+ L+ VPIL LTATA V DV + L +Q L ++ FNR NL Y
Sbjct: 224 HDFRTDYSFLNVLKRQFKGVPILGLTATATSNVLDDVKDMLGIQAALTFRAGFNRSNLKY 283
Query: 122 EVRYK-DLLDDAYADLCSVLKAN-GDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGL 179
+V K D+ ++ +K + I+YCL R C++++ L + GI YHA +
Sbjct: 284 KVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAYM 343
Query: 180 NDKARSSVLDDWISSRKQVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRD 239
RS WIS + QV+VATVAFGMGID+ +VR V H ++PKS+E +YQESGRAGRD
Sbjct: 344 EPVDRSGAHQGWISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRD 403
Query: 240 QLPSKSLLYYGMDDRRRMEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDY-CEGSGC 298
P+ +LYY + D I ++ S +ER+ I + MV Y + S C
Sbjct: 404 GQPATCILYYRLAD------IFKQS------SMVQQERT---GIQNLYNMVRYAADSSTC 448
Query: 299 RRKKILESFGEQIPVSLCKNSCDACKHPN 327
RR K+ E F E S C+ CD C++ N
Sbjct: 449 RRVKLAEHFEEAWEPSWCQKQCDTCENGN 477
>gi|333029863|ref|ZP_08457924.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332740460|gb|EGJ70942.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 605
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 181/309 (58%), Gaps = 19/309 (6%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
++LLY++PE +S++ + ++L A+DEAHCIS WGHDFRP Y +L L Y
Sbjct: 109 IKLLYISPE-----KLLSEIDYLLKDIDISLFAVDEAHCISQWGHDFRPEYTQLGILHQY 163
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP++ALTATA ++D++ L L+NP + SSF+RPNL +V D + +
Sbjct: 164 FPSVPMVALTATADKITRQDIIRQLKLKNPKIFISSFDRPNLSLKVEVGYQQKDKHKYIY 223
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
+ ++ I+YC+ R + + YL GIS YHAGL R DD+I+ R Q
Sbjct: 224 NFIQDRPGEAGIIYCMSRKKTETICRYLEKKGISATIYHAGLAPNIREKAQDDFINDRVQ 283
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
VV AT+AFGMGID+ +VR V H+N+PKS+E++YQE GRAGRD + S ++L+Y + D
Sbjct: 284 VVCATIAFGMGIDKSNVRWVIHYNMPKSIESYYQEIGRAGRDGVASDTVLFYNVGDI--- 340
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
+L+K F+ + + ++ ++ Y E S CRR+ +L FGE+ C
Sbjct: 341 -ILLTK--------FANESKQQEINLEKLDRIQQYAESSICRRRILLSYFGEE-STQNCG 390
Query: 318 NSCDACKHP 326
N CD C++P
Sbjct: 391 N-CDVCQNP 398
>gi|261854926|ref|YP_003262209.1| ATP-dependent DNA helicase RecQ [Halothiobacillus neapolitanus c2]
gi|261835395|gb|ACX95162.1| ATP-dependent DNA helicase RecQ [Halothiobacillus neapolitanus c2]
Length = 609
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 126/310 (40%), Positives = 176/310 (56%), Gaps = 14/310 (4%)
Query: 17 SLRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRN 76
+L LLYV PE +S L+ +NL+AIDEAHC+S WGHDFRP Y +L L
Sbjct: 111 TLDLLYVAPERLLNADTLSLLRDAS----INLIAIDEAHCVSQWGHDFRPEYIRLGELGQ 166
Query: 77 YLPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADL 136
Y PD+P +ALTATA Q++++ L L N V SSF+RPN+ Y + A L
Sbjct: 167 YFPDIPRIALTATADGTTQQEILYRLGLNNARVFISSFDRPNIRYHIAQNHAGSARDALL 226
Query: 137 CSVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRK 196
+ + + IVYCL R +E++A+LS G++ AYHAGL R L ++
Sbjct: 227 RFIRDNHANEAGIVYCLSRKRVEEIAAWLSDQGLTALAYHAGLPATQREQTLRRFLDEDG 286
Query: 197 QVVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRR 256
+VVAT+AFGMGID+ DVR V H N+PKS+EA+YQE+GRAGRD LP+++ + YG+ D
Sbjct: 287 VIVVATIAFGMGIDKPDVRFVAHLNLPKSIEAYYQETGRAGRDGLPAEAWMRYGLQDVIT 346
Query: 257 MEFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLC 316
+ ++S++ + E + M+ E + CRR+ +L FGEQ C
Sbjct: 347 LRQMMSESNAD--------EAIKRIEQHKLDAMLGLSESTACRRQTLLGYFGEQ-STEPC 397
Query: 317 KNSCDACKHP 326
N CD C P
Sbjct: 398 GN-CDNCLTP 406
>gi|420240910|ref|ZP_14745092.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. CF080]
gi|398073946|gb|EJL65104.1| ATP-dependent DNA helicase RecQ [Rhizobium sp. CF080]
Length = 619
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/309 (41%), Positives = 176/309 (56%), Gaps = 17/309 (5%)
Query: 18 LRLLYVTPELTATPGFMSKLKKIHSRGLLNLVAIDEAHCISSWGHDFRPSYRKLSSLRNY 77
L LLYVTPE TP F K++ + L AIDEAHC+S WGHDFRP YR+L L +
Sbjct: 123 LDLLYVTPERIVTPAF----KEMIGNAKIALFAIDEAHCVSQWGHDFRPEYRELGHLAEH 178
Query: 78 LPDVPILALTATAAPKVQKDVMESLCLQNPLVLKSSFNRPNLFYEVRYKDLLDDAYADLC 137
P VP +ALTATA P ++D+++ L L++ V +SF+RPN+ YE+ +D L
Sbjct: 179 YPGVPRMALTATADPHTREDIIDKLELRSAEVFTTSFDRPNIAYEIVERD---QPRQQLL 235
Query: 138 SVLKANGDTCAIVYCLERTTCDELSAYLSAGGISCAAYHAGLNDKARSSVLDDWISSRKQ 197
L + + IVYCL R ++ + +L+ GI AYHAG++ R + D ++
Sbjct: 236 RFLSRHKGSSGIVYCLSRAKVEDTADWLNGQGIRALAYHAGMDRGMRDANQDAFLKEEDL 295
Query: 198 VVVATVAFGMGIDRKDVRLVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGMDDRRRM 257
+VATVAFGMGID+ +VR V H ++P S+EA+YQE+GRAGRD LPS + YGM D +
Sbjct: 296 CLVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSDVWMAYGMADVIQR 355
Query: 258 EFILSKNQSKNSQSFSTRERSSKKSISDFSQMVDYCEGSGCRRKKILESFGEQIPVSLCK 317
++ + S N R + + ++ CE GCRR+ IL FGE C
Sbjct: 356 GRMIDEGTSGNDIKRVERAK--------LNALLGICETPGCRRQAILAHFGEAHG-GQCG 406
Query: 318 NSCDACKHP 326
N CD C P
Sbjct: 407 N-CDTCLKP 414
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,008,552,157
Number of Sequences: 23463169
Number of extensions: 240907514
Number of successful extensions: 626705
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 26798
Number of HSP's successfully gapped in prelim test: 2606
Number of HSP's that attempted gapping in prelim test: 582635
Number of HSP's gapped (non-prelim): 31629
length of query: 394
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 250
effective length of database: 8,980,499,031
effective search space: 2245124757750
effective search space used: 2245124757750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)