BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016134
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNZ1|C3H63_ARATH Zinc finger CCCH domain-containing protein 63 OS=Arabidopsis
thaliana GN=ZFWD2 PE=2 SV=1
Length = 443
Score = 325 bits (834), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 246/442 (55%), Gaps = 92/442 (20%)
Query: 26 GGGVGGGWP-----TNKVVCVYVLEGRCNRNPCRFAHTESSSLLLSNPKLAKKSPPSYNR 80
GGG G P T + VC + GRCNR+PC + H E L P + P Y
Sbjct: 17 GGGGGSTRPMAPTDTRQKVCFHWRAGRCNRSPCPYLHRE-----LPGPGPGQGQGPGYTN 71
Query: 81 LKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCH 140
+ E +R PG+ G ++SS+ G+++ +K + VC
Sbjct: 72 KR------VAEESGFAGPSHRRGPGFNG-----NSSSSWGRFGGNRTVTKT---EKVCNF 117
Query: 141 WLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--- 197
W+ GNC GD+CR+LH W GE +L +L+GHEK VSGIALP SDKL++GS+D T
Sbjct: 118 WVDGNCTYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRV 177
Query: 198 -------------------------------------AWNIESSAEFSLDGPVGEVYSMV 220
AWNIE++A+ SL GPVG+VYS+V
Sbjct: 178 WDCASGQCTGVLKLGGEIGCVLSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVYSLV 237
Query: 221 VANEMLFAGAQDG----------------------HTRPVTCLAVGRSRLCSGSMDNTIR 258
V ++LFAG QDG HT V L VG +RL SGSMD TI+
Sbjct: 238 VGTDLLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANRLYSGSMDKTIK 297
Query: 259 VWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDN 318
VW LD L+ + TL DH+ MSL+CWDQFLLSCSLD+T+K+W A GNLE YTHKE++
Sbjct: 298 VWSLDNLQCIQTLTDHSSVVMSLICWDQFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEH 357
Query: 319 GVLALGGLNDPDGKPVLICACNDNTVHLYELPS------FMERGRIFSKHEVRVIEIGPD 372
GVLAL G++D + KPVL+CACNDNT+ LY+LPS F ERG+IF+K E+R I+IGP
Sbjct: 358 GVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSLGLFIRFTERGKIFAKQEIRAIQIGPG 417
Query: 373 KLFFTGDGAGMLGVWKLLAKPS 394
+FFTGDG G + VWK +P+
Sbjct: 418 GIFFTGDGTGQVKVWKWCTEPT 439
>sp|Q9FNZ2|C3H48_ARATH Zinc finger CCCH domain-containing protein 48 OS=Arabidopsis
thaliana GN=ZFWD1 PE=2 SV=1
Length = 430
Score = 324 bits (831), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/416 (42%), Positives = 238/416 (57%), Gaps = 84/416 (20%)
Query: 35 TNKVVCVYVLEGRCNRNPCRFAHTESSSLLLSNPKLAKKSPPSYNRLKNNLWVSSGSEDR 94
+N+ VC + GRCNR PC + H E L P + S R+ + E
Sbjct: 27 SNQKVCFHWRAGRCNRYPCPYLHRE-----LPGPGSGPVAASSNKRVAD--------ESG 73
Query: 95 IPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154
+R PG++G N+ G T KT + +C W+ GNC GD+CR+
Sbjct: 74 FAGPSHRRGPGFSGTANNWG-------RFGGNRTVTKT--EKLCKFWVDGNCPYGDKCRY 124
Query: 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT----------------- 197
LH W G+ ++L +L+GH+K V+GIALP SDKL++ S+D T
Sbjct: 125 LHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNL 184
Query: 198 -----------------------AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG- 233
AWNI+++A+ SL+GPVG+VYS+VV ++LFAG QDG
Sbjct: 185 GGEVGCIISEGPWLLVGMPNLVKAWNIQNNADLSLNGPVGQVYSLVVGTDLLFAGTQDGS 244
Query: 234 ---------------------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLN 272
HT V L VG +RL SG+MDN+I+VW LD L+ + TL
Sbjct: 245 ILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLT 304
Query: 273 DHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGK 332
+HT MSL+CWDQFLLSCSLD+T+K+W AT GNLE YTHKE+ GVLAL G++D + K
Sbjct: 305 EHTSVVMSLICWDQFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVHDAEAK 364
Query: 333 PVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWK 388
PVL+C+CNDN++HLY+LPSF ERG+I +K E+R I+IGP +FFTGDG+G + VWK
Sbjct: 365 PVLLCSCNDNSLHLYDLPSFTERGKILAKQEIRSIQIGPGGIFFTGDGSGQVKVWK 420
>sp|Q0DYP5|C3H17_ORYSJ Zinc finger CCCH domain-containing protein 17 OS=Oryza sativa
subsp. japonica GN=Os02g0677700 PE=2 SV=2
Length = 435
Score = 314 bits (805), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 186/453 (41%), Positives = 236/453 (52%), Gaps = 92/453 (20%)
Query: 1 MDVKASKRFTDQRERSFFNPINGQAGGGVGGGWPTNKVVCVYVLEGRCNRNPCRFAHTES 60
MD++ RF ++R P NG A G VC++ GRCNR PC + H+E
Sbjct: 1 MDIETDGRFGNKRVHHRLGPANGAASSSTSGK------VCIHWRAGRCNRFPCPYLHSEL 54
Query: 61 SSLLLSNPKLAKKSPPSYNRLKNNLWVSSGSEDRIPH---VRNRENPGYTGPKNSSSASS 117
P+ K P S + N+W R PH R G GP
Sbjct: 55 -------PEATAKRP-SQSGGGGNVW-------RNPHSGGGGGRGAGGAGGPNKWGRGPG 99
Query: 118 TVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAV 177
K + C ++L G+C G++CR+ HS+ + +TML L+GHEK V
Sbjct: 100 GADGGPRHKVPDRP------CRYFLAGDCSYGEKCRYPHSYSMSDSITMLTPLQGHEKVV 153
Query: 178 SGIALPLRSDKLFSGSRDGTA--------------------------------------- 198
+GIALP SDKL+SGS+DGT
Sbjct: 154 TGIALPAGSDKLYSGSKDGTVRMWDCQTGQCAGVINMGREIGCMISEGPWLFVGIPDAVK 213
Query: 199 -WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG----------------------HT 235
WN+++ AE +L GP G+VY++ V NE+LFA QDG H
Sbjct: 214 VWNMQTQAEMNLTGPTGQVYALAVGNELLFAATQDGRILAWRFSAATNGFEPAASLVGHQ 273
Query: 236 RPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDH 295
V L VG RL S SMD TIRVW+L TL+ + TL+DHT MS+LCWDQFLLSCSLD
Sbjct: 274 LAVVSLVVGAMRLYSASMDKTIRVWDLATLQCIQTLSDHTGVVMSVLCWDQFLLSCSLDQ 333
Query: 296 TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMER 355
TIKVW AT G+LE YTHKE++G LAL G+ D KPVL+C+ NDNTV LY+LPSF +R
Sbjct: 334 TIKVWAATESGSLEVTYTHKEEHGALALSGMPDAQSKPVLLCSLNDNTVRLYDLPSFSDR 393
Query: 356 GRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWK 388
GRIFSK E+R I++GP LFFTGDG G L VW+
Sbjct: 394 GRIFSKQEIRAIQVGPSGLFFTGDGTGELKVWQ 426
>sp|Q9FE91|C3H62_ARATH Zinc finger CCCH domain-containing protein 62 OS=Arabidopsis
thaliana GN=ZFWD4 PE=2 SV=1
Length = 419
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 177/324 (54%), Gaps = 67/324 (20%)
Query: 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR 194
K VC +W G C RG++C+FLHSW C GL M+A LEGH K + GIALP SDKLFS S
Sbjct: 92 KWVCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSI 151
Query: 195 DGT----------------------------------------AWNIESSAEFSLD--GP 212
DGT A+N+++S + L G
Sbjct: 152 DGTLRVWDCNSGQCVHSINLDAEAGSLISEGPWVFLGLPNAIKAFNVQTSQDLHLQAAGV 211
Query: 213 VGEVYSMVVANEMLFAGAQ------------------------DGHTRPVTCLAVGRSRL 248
VG+V +M +AN MLFAG +GH+ VTC AVG L
Sbjct: 212 VGQVNAMTIANGMLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQML 271
Query: 249 CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNL 308
SGS+D TI++W+L+TL+ +MTL HT SLLCWD+ L+S SLD TIKVW + G L
Sbjct: 272 YSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDKCLISSSLDGTIKVWAYSENGIL 331
Query: 309 EAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVI 367
+ T + E + V AL G++D + KP++ C+ + TV +++LPSF ERGR+FS H + +
Sbjct: 332 KVVQTRRQEQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQERGRMFSTHTIATL 391
Query: 368 EIGPDKLFFTGDGAGMLGVWKLLA 391
IGP L F+GD +G L VW L A
Sbjct: 392 TIGPQGLLFSGDESGNLRVWTLAA 415
>sp|Q9FKR9|C3H59_ARATH Zinc finger CCCH domain-containing protein 59 OS=Arabidopsis
thaliana GN=ZFWD3 PE=2 SV=1
Length = 472
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 186/353 (52%), Gaps = 70/353 (19%)
Query: 101 RENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFC 160
R+N Y GP+ SS++SD G + K+VC W GNC +G++C+FLHSW C
Sbjct: 120 RKNAVY-GPR-----SSSLSDTRGCGPRLNGSPKKSVCNFWKDGNCKKGEKCQFLHSWSC 173
Query: 161 GEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT----------------------- 197
GL M+A LEGH+ + GIALP SDKLFS S DGT
Sbjct: 174 FPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGS 233
Query: 198 -----------------AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG------- 233
A+N+++S + L+G VG+V++M AN MLFAG G
Sbjct: 234 LISEGPWVFLGLPNAVKAFNVQNSKDVHLEGVVGQVHAMTAANGMLFAGTSSGSILVWKA 293
Query: 234 -----------------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD 276
H+ VTC VG L SGS+D TI+VW+L+TL+ MTL H
Sbjct: 294 TDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIG 353
Query: 277 APMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLI 336
SLLCWD+ L+S SLD TIK+W + +L+ T K++ V L G++D + KP++
Sbjct: 354 TVTSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMF 413
Query: 337 CACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKL 389
C+ + V +++LPSF ERG++FS + + IGP L F+GD +G L VW L
Sbjct: 414 CSYQNGAVGIFDLPSFEERGKMFSTQTICTLTIGPGGLLFSGDKSGNLRVWSL 466
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB
PE=2 SV=1
Length = 732
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 208 SLDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGRSRLC 249
+L G G V S+ ++ LF+G+ D GH +PV + + L
Sbjct: 497 TLKGHEGPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLF 556
Query: 250 SGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW-FATGRGNL 308
SGS D TI+VW+L TLE TL H A +L Q+L S S D TIKVW T R N
Sbjct: 557 SGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWDLKTFRCNY 616
Query: 309 EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIE 368
H + + + G N L D T+ ++ L S +E H+ R +E
Sbjct: 617 TLK-GHTKWVTTICILGTN-------LYSGSYDKTIRVWNLKS-LECSATLRGHD-RWVE 666
Query: 369 --IGPDKLFFTGDGAGMLGVWKL 389
+ DKL FT + +W L
Sbjct: 667 HMVICDKLLFTASDDNTIKIWDL 689
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 30/215 (13%)
Query: 159 FCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGE 215
+ + + + L+GHE V I LFSGS D + W+++ F+L+G
Sbjct: 487 YKSQNMECVQTLKGHEGPVESICY--NDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKP 544
Query: 216 VYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTI 257
V+++++ ++ LF+G+ D H R V L + L SGS D TI
Sbjct: 545 VHTVLLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISGQYLFSGSNDKTI 604
Query: 258 RVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317
+VW+L T TL HT ++ L S S D TI+VW +LE + T +
Sbjct: 605 KVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVW---NLKSLECSATLRGH 661
Query: 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
+ + + D +L A +DNT+ +++L +
Sbjct: 662 DRWVEHMVICD----KLLFTASDDNTIKIWDLETL 692
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 25/154 (16%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEML 226
LE H +AV L + LFSGS D T W++++ ++L G V ++ + L
Sbjct: 578 LESHARAVK--TLCISGQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNL 635
Query: 227 FAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPV 268
++G+ D GH R V + + L + S DNTI++W+L+TL
Sbjct: 636 YSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCN 695
Query: 269 MTLNDHTDAPMSLLCWD--QFLLSCSLDHTIKVW 300
TL H L W+ + ++SCS D +I+VW
Sbjct: 696 TTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 241 LAVGRSRLCSGSMDNTIRVWELDT--LEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTI 297
L + + L +G DN+IRV++ + +E V TL H + P+ +C+ DQ+L S S DH+I
Sbjct: 466 LCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGH-EGPVESICYNDQYLFSGSSDHSI 524
Query: 298 KVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGR 357
KVW L +T + + + LND L +D T+ +++L + +E
Sbjct: 525 KVW---DLKKLRCIFTLEGHDKPVHTVLLND----KYLFSGSSDKTIKVWDLKT-LECKY 576
Query: 358 IFSKH--EVRVIEIGPDKLFFTGDGAGMLGVWKL 389
H V+ + I L F+G + VW L
Sbjct: 577 TLESHARAVKTLCISGQYL-FSGSNDKTIKVWDL 609
>sp|P87053|POF1_SCHPO F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof1 PE=1 SV=1
Length = 605
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 88/207 (42%), Gaps = 31/207 (14%)
Query: 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFS-LDGPVGEVYSMV 220
+A LEGH V+ L KL SGS D T WN +S S L G V +
Sbjct: 303 FQQVALLEGHSSGVT--CLQFDQCKLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLT 360
Query: 221 VANEMLFAGAQD-----------------GHTRPVTCLAVGRSR--LCSGSMDNTIRVWE 261
+ +L +G+ D GHT PV + + R R + SGS D+TI++W
Sbjct: 361 FDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWS 420
Query: 262 LDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVL 321
L+T + T + H SL D L SCSLD TIK W + + + H E +
Sbjct: 421 LETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEI 480
Query: 322 ALGGLNDPDGKPVLICACNDNTVHLYE 348
A L LI +D V ++E
Sbjct: 481 AADHLR-------LISGAHDGVVKVWE 500
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESS 204
V + CR +W G ++ L GH V + L L + L SGS D T WN+ +
Sbjct: 248 VYAERCRVECNWRHGRCRQVV--LSGHSDGV--MCLQLVRNILASGSYDATIRLWNLATF 303
Query: 205 AEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
+ +L +GH+ VTCL + +L SGSMD TIR+W T
Sbjct: 304 QQVAL---------------------LEGHSSGVTCLQFDQCKLISGSMDKTIRIWNYRT 342
Query: 265 LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATG 304
E + L+ HTD+ + L L+S S D T+K+W +G
Sbjct: 343 SECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSG 382
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 32/183 (17%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANE 224
++ L GH +V + L S L SGS D T W+ +L G G V S+ + +
Sbjct: 346 ISILHGHTDSV--LCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRD 403
Query: 225 --MLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
++ +G+ D H PV LA+ SRL S S+D TI+ W+++
Sbjct: 404 RGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSCSLDGTIKQWDIEK 463
Query: 265 LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYT---HKEDNGVL 321
+ V TL H + + L+S + D +KVW A E +T H E +
Sbjct: 464 KKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWEAC-----ECVHTLKNHSEPVTSV 518
Query: 322 ALG 324
ALG
Sbjct: 519 ALG 521
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEF-SLDGPVGEVYSMVVANEML 226
L GH V+ + + + SGS D T W++E++ + +G V S+ +A+ L
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRL 447
Query: 227 FAGAQDG------------------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPV 268
F+ + DG H V +A RL SG+ D ++VWE E V
Sbjct: 448 FSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWE--ACECV 505
Query: 269 MTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWF 301
TL +H++ S+ D ++S S D I +W
Sbjct: 506 HTLKNHSEPVTSVALGDCEVVSGSEDGKIYLWL 538
>sp|Q6BU94|PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PRP46 PE=3 SV=2
Length = 417
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 168 AKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFS------LDGPVGEVYSM 219
A + GH V +A+ R LFSGS D T W++E + S G VG +Y+M
Sbjct: 158 ATITGHIMGVRSLAVSSRYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAM 217
Query: 220 VVANEM--LFAGAQD------------------GHTRPVTCLA--VGRSRLCSGSMDNTI 257
+ E+ LF G +D GH +T +A +G ++ + SMD TI
Sbjct: 218 ALHPELDLLFTGGRDSVIRVWDLRSRTEIMVLSGHRSDITSIASQIGDPQIITSSMDATI 277
Query: 258 RVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHT--IKVWFATGRGNLEAAYTHK 315
R+W++ + L H+ + S+ Q + CS D + +K W G G L + H
Sbjct: 278 RLWDIRKATTQLALTHHSKSIRSMAMHPQEMTMCSGDTSGNLKEWLLPG-GELLNEFGHS 336
Query: 316 EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351
+N ++ +N + L +D + Y+ S
Sbjct: 337 GENKIINTLSINPSNN--TLFSGYDDGRMEFYDYVS 370
Score = 41.2 bits (95), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 46/210 (21%)
Query: 226 LFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD 285
+ AGA G R T V +GS D+TI++W+L + T+ H SL
Sbjct: 115 VMAGAHQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDLASSNLKATITGHIMGVRSLAVSS 174
Query: 286 Q--FLLSCSLDHTIKVW-----------------------------------FATGRGNL 308
+ +L S S D T+K W F GR ++
Sbjct: 175 RYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELDLLFTGGRDSV 234
Query: 309 EAAYTHKEDNGVLALGG-------LNDPDGKPVLICACNDNTVHLYEL-PSFMERGRIFS 360
+ + ++ L G + G P +I + D T+ L+++ + +
Sbjct: 235 IRVWDLRSRTEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWDIRKATTQLALTHH 294
Query: 361 KHEVRVIEIGPDKLFF-TGDGAGMLGVWKL 389
+R + + P ++ +GD +G L W L
Sbjct: 295 SKSIRSMAMHPQEMTMCSGDTSGNLKEWLL 324
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 30/227 (13%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204
+ G R L W G + L GH V + L ++ SGSRD T W+IE+
Sbjct: 435 ISGSTDRTLKVWNAETG-ECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 491
Query: 205 AEFS-LDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGR 245
L G V V + + +GA D GHT V L
Sbjct: 492 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 551
Query: 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW-FATG 304
+ SGS+D +IRVW+++T + TL H + D L+S + D T+K+W TG
Sbjct: 552 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 611
Query: 305 RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351
+ +K + V L K +I + +D TV L++L +
Sbjct: 612 QCLQTLQGPNKHQSAVTCL-----QFNKNFVITSSDDGTVKLWDLKT 653
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 238 VTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTI 297
+TCL +R+ SGS DNT++VW T + + TL HT S D ++S S D T+
Sbjct: 384 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 443
Query: 298 KVWFATGRGNLEAAYTH 314
KVW A + Y H
Sbjct: 444 KVWNAETGECIHTLYGH 460
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V + + + SGS D T++VW +T E + TL HT + ++ ++S S
Sbjct: 419 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS 478
Query: 293 LDHTIKVW 300
D T++VW
Sbjct: 479 RDATLRVW 486
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 79 NRLKNNLWVSSGSEDRIPHVRNRENPG--YTGPKNSSSASSTVSDESGDKSTSKKTTLK- 135
+++++N+ + SGS DR V N E +T ++S+ E S S+ TL+
Sbjct: 427 SQMRDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV 485
Query: 136 -----NVCCHWLLGN-----CVRGDECR-------FLHSWFCGEGLTMLAKLEGHEKAVS 178
C H L+G+ CV+ D R F+ + E T L L+GH V
Sbjct: 486 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 544
Query: 179 GIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDG-- 233
+L + SGS D + W++E+ + +L G M + + +L +G D
Sbjct: 545 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTV 603
Query: 234 -------------------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTL 271
H VTCL ++ + + S D T+++W+L T E + L
Sbjct: 604 KIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 660
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 34/229 (14%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204
+ G R L W G + L GH V + L ++ SGSRD T W+IE+
Sbjct: 357 ISGSTDRTLKVWNAETG-ECIHTLYGHTSTVR--CMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 205 AEFS-LDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGR 245
L G V V + + +GA D GHT V L
Sbjct: 414 QCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDG 473
Query: 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW-FATG 304
+ SGS+D +IRVW+++T + TL H + D L+S + D T+K+W TG
Sbjct: 474 IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 533
Query: 305 R--GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351
+ L+ H+ L K +I + +D TV L++L +
Sbjct: 534 QCLQTLQGPSKHQSAVTCLQF-------NKNFVITSSDDGTVKLWDLKT 575
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 238 VTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTI 297
+TCL +R+ SGS DNT++VW T + + TL HT S D ++S S D T+
Sbjct: 306 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 365
Query: 298 KVWFATGRGNLEAAYTH 314
KVW A + Y H
Sbjct: 366 KVWNAETGECIHTLYGH 382
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 79 NRLKNNLWVSSGSEDRIPHVRNRENPG--YTGPKNSSSASSTVSDESGDKSTSKKTTLK- 135
+++++N+ + SGS DR V N E +T ++S+ E S S+ TL+
Sbjct: 349 SQMRDNI-IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRV 407
Query: 136 -----NVCCHWLLGN-----CVRGDECR-------FLHSWFCGEGLTMLAKLEGHEKAVS 178
C H L+G+ CV+ D R F+ + E T L L+GH V
Sbjct: 408 WDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRV- 466
Query: 179 GIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDG-- 233
+L + SGS D + W++E+ + +L G M + + +L +G D
Sbjct: 467 -YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTV 525
Query: 234 -------------------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTL 271
H VTCL ++ + + S D T+++W+L T E + L
Sbjct: 526 KIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V + + + SGS D T++VW +T E + TL HT + ++ ++S S
Sbjct: 341 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS 400
Query: 293 LDHTIKVW 300
D T++VW
Sbjct: 401 RDATLRVW 408
>sp|Q01277|SCONB_NEUCR Probable E3 ubiquitin ligase complex SCF subunit scon-2
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=scon-2 PE=1 SV=1
Length = 650
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH VTCL + + L +GS D TI++W ++T E + TL HT +L D L+S S
Sbjct: 292 GHENGVTCLQLDDNILATGSYDTTIKIWNIETEECIRTLVGHTAGIRALQFDDSKLISGS 351
Query: 293 LDHTIKVW 300
LDHTIKVW
Sbjct: 352 LDHTIKVW 359
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 25/136 (18%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANE 224
L+ L+GHE V+ L L + L +GS D T WNIE+ E +V
Sbjct: 287 LSVLKGHENGVT--CLQLDDNILATGSYDTTIKIWNIETE----------ECIRTLV--- 331
Query: 225 MLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW 284
GHT + L S+L SGS+D+TI+VW T E + T HTD+ +S+
Sbjct: 332 --------GHTAGIRALQFDDSKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVHFD 383
Query: 285 DQFLLSCSLDHTIKVW 300
L S S D T+K++
Sbjct: 384 GHLLASGSSDKTVKIF 399
Score = 31.6 bits (70), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 24/127 (18%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFS-LDGPVGEVYSMVVANEML 226
L GH + AL KL SGS D T WN + S V S+ +L
Sbjct: 330 LVGHTAGIR--ALQFDDSKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVHFDGHLL 387
Query: 227 FAGAQD-----------------GHTRPV--TCLAVGRSRLCSGSMDNTIRVWELDTLEP 267
+G+ D GH+ V T + + + S S D TI++W+LDT +
Sbjct: 388 ASGSSDKTVKIFDFNSKETYCLKGHSDWVNSTHVDIKSRTVFSASDDTTIKLWDLDTRQV 447
Query: 268 VMTLNDH 274
+ T H
Sbjct: 448 IRTYEGH 454
>sp|B8M7Q5|SCONB_TALSN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Talaromyces stipitatus (strain ATCC 10500 / CBS
375.48 / QM 6759 / NRRL 1006) GN=sconB PE=3 SV=1
Length = 667
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+++T E + TL HT L D L+S S
Sbjct: 347 GHTNGVMCLQFEDNILATGSYDMTIKIWDMETGEELRTLTGHTSGIRCLQFDDTKLISGS 406
Query: 293 LDHTIKVW-------FATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVH 345
+D T+KVW +T G+L +N VLA G + DNTV
Sbjct: 407 IDRTLKVWNWRTGECISTYTGHLGGIIGLHFENSVLASGSI--------------DNTVK 452
Query: 346 LYELP---SFMERGRIFSKHEVRV 366
++ +F+ RG + VRV
Sbjct: 453 IWNFEDKSTFLLRGHSDWVNAVRV 476
>sp|Q61FW2|SEL10_CAEBR F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis
briggsae GN=sel-10 PE=3 SV=1
Length = 589
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 168 AKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVAN- 223
A L GHE+ V + + +D L +GS D T W+I+ + +L+G G V++ ++
Sbjct: 251 AILRGHEEHVI-TCMQIHNDLLVTGSDDNTLKVWSIDDGEVKHTLNGHSGGVWTSQISQC 309
Query: 224 -EMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
+ +G+ D GHT V C+A+ + L +GS D T+RVW+++T
Sbjct: 310 GRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMANTTLVTGSRDCTLRVWDIET 369
Query: 265 LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFA 302
V TL H A + ++S D T+K+W A
Sbjct: 370 GLHVRTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIWDA 407
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204
V G R + W +G +L L+GH V +A+ + L +GSRD T W+IE+
Sbjct: 314 VSGSTDRTVKVWRAEDGF-LLHTLQGHTSTVRCMAMA--NTTLVTGSRDCTLRVWDIETG 370
Query: 205 AEF-SLDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVG- 244
+L G V + ++ +G D GH+ V L
Sbjct: 371 LHVRTLQGHQAAVRCVQFDGNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYES 430
Query: 245 -RSRLCSGSMDNTIRVWEL---DTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW 300
RS +CSGS+D +IRVW+ + E + L+ HT + L+SC+ D ++VW
Sbjct: 431 ERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLRGNILVSCNADSHVRVW 490
>sp|P42527|MHCKA_DICDI Myosin heavy chain kinase A OS=Dictyostelium discoideum GN=mhkA PE=1
SV=2
Length = 1146
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEF----SLDG 211
+W C L + GH K++ IA S+ +F+ S D T +I S +L G
Sbjct: 901 NWKC------LYTVNGHRKSIESIAC--NSNYIFTSSPDNTIKVHIIRSGNTKCIETLVG 952
Query: 212 PVGEVYSMVVANEMLFAGAQDG-------------------HTRPVTCLAVGRSRLCSGS 252
GEV +V + LF+ + D HT+ + LA+ L SG
Sbjct: 953 HTGEVNCVVANEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLALSGRYLFSGG 1012
Query: 253 MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW 300
D I VW+ +TL + + H D +SL C +L S S D+ IK+W
Sbjct: 1013 NDQIIYVWDTETLSMLFNMQGHEDWVLSLHCTASYLFSTSKDNVIKIW 1060
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 138 CCHWLLG-----NCVRGDECRFLHSWFCGEGLTM----------LAKLEG-HEKAVSGIA 181
C L+G NCV +E ++L S C T+ + EG H K + +A
Sbjct: 946 CIETLVGHTGEVNCVVANE-KYLFS--CSYDKTIKVWDLSTFKEIKSFEGVHTKYIKTLA 1002
Query: 182 LPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVT 239
L R LFSG D W+ E+ + MLF GH V
Sbjct: 1003 LSGRY--LFSGGNDQIIYVWDTETLS-------------------MLFN--MQGHEDWVL 1039
Query: 240 CLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKV 299
L S L S S DN I++W+L + TL H ++ S + D++L S S D++IKV
Sbjct: 1040 SLHCTASYLFSTSKDNVIKIWDLSNFSCIDTLKGHWNSVSSCVVKDRYLYSGSEDNSIKV 1099
Query: 300 WFATGRGNLEAAYTHKEDN--GVLALGGLNDPDGKPVLICACNDNTVHLYE 348
W LE YT + + GV L N+ +I A D ++ ++E
Sbjct: 1100 W---DLDTLECVYTIPKSHSLGVKCLMVFNNQ-----IISAAFDGSIKVWE 1142
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 248 LCSGSMDNTIRVWEL-DTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRG 306
LC+G D T RV+++ D + + T+N H + S+ C ++ + S D+TIKV G
Sbjct: 884 LCAGYGDGTYRVFDVNDNWKCLYTVNGHRKSIESIACNSNYIFTSSPDNTIKVHIIRS-G 942
Query: 307 N---LEAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKH 362
N +E H E N V+A + L D T+ +++L +F E H
Sbjct: 943 NTKCIETLVGHTGEVNCVVA--------NEKYLFSCSYDKTIKVWDLSTFKEIKSFEGVH 994
Query: 363 EVRVIEIG-PDKLFFTGDGAGMLGVW 387
+ + + F+G ++ VW
Sbjct: 995 TKYIKTLALSGRYLFSGGNDQIIYVW 1020
>sp|Q54KL5|WDR5_DICDI WD repeat-containing protein 5 homolog OS=Dictyostelium discoideum
GN=wdr5 PE=3 SV=1
Length = 335
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 97/212 (45%), Gaps = 30/212 (14%)
Query: 166 MLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVAN 223
M+ L+GH++ V G++ +S+ + SGS D W++ + GE M+ A
Sbjct: 122 MVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT----------GECTKMISA- 170
Query: 224 EMLFAGAQDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSL 281
H+ PVT + R + + SGS D T+R+W+ T + + T++ +S
Sbjct: 171 ----------HSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSF 220
Query: 282 LCWD---QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICA 338
+ + +F+L+ +LD+T+++W YT ++ + GK + +
Sbjct: 221 VKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWI-VTG 279
Query: 339 CNDNTVHLYELPSFMERGRIFSKHEVRVIEIG 370
DN +++Y L + E + + HE V+ +
Sbjct: 280 SEDNLIYIYNLQT-REIVQTLAGHEDVVLTVA 310
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLF 227
LEGH++ +S IA S + S S D T W++ES V ++ E +F
Sbjct: 84 LEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKM---------VKTLKGHKEYVF 134
Query: 228 AGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ- 286
+ + P + L V SGS D +R+W+++T E ++ H+D P++ + +++
Sbjct: 135 GVSFN----PQSNLIV------SGSFDENVRIWDVNTGECTKMISAHSD-PVTGVHFNRD 183
Query: 287 --FLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTV 344
++S S D T+++W T L T ED ++ + P+GK VL DNT+
Sbjct: 184 GTLVVSGSYDGTVRIWDTTTGQLLNTIST--EDGKEVSFVKFS-PNGKFVL-AGTLDNTL 239
Query: 345 HLYELPSFMERGRIFSKHE 363
L+ + + + ++ H+
Sbjct: 240 RLWSYNNNKKCLKTYTGHK 258
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 27/137 (19%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLF 227
L+GH K++S + L S S D T W + DG F
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWG-------AYDGK--------------F 80
Query: 228 AGAQDGHTRPVTCLAVGRSR--LCSGSMDNTIRVWELDTLEPVMTLNDHTDAP--MSLLC 283
+GH ++ +A + +CS S D TI++W++++ + V TL H + +S
Sbjct: 81 ERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNP 140
Query: 284 WDQFLLSCSLDHTIKVW 300
++S S D +++W
Sbjct: 141 QSNLIVSGSFDENVRIW 157
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 61/165 (36%), Gaps = 34/165 (20%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSL----DGPVGEVYSMVVAN 223
+ H V+G+ + SGS DGT W+ + + DG
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNG 227
Query: 224 EMLFAGAQD-------------------GHTRPVTCLAVGRSRLC-----SGSMDNTIRV 259
+ + AG D GH C+ S C +GS DN I +
Sbjct: 228 KFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYI 287
Query: 260 WELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL--DHTIKVW 300
+ L T E V TL H D +++ C + + S +L D ++K+W
Sbjct: 288 YNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
>sp|Q55563|Y163_SYNY3 Uncharacterized WD repeat-containing protein sll0163 OS=Synechocystis
sp. (strain PCC 6803 / Kazusa) GN=sll0163 PE=4 SV=1
Length = 1693
Score = 57.4 bits (137), Expect = 2e-07, Method: Composition-based stats.
Identities = 73/269 (27%), Positives = 110/269 (40%), Gaps = 65/269 (24%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIES--------------SAEFSLD 210
L L GH+ AV + S + + S+DGTA WN +AEFS D
Sbjct: 1417 LTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWNNTGRELAVLRHYEKNIFAAEFSAD 1476
Query: 211 GPVGEVYSMVVANEMLFAGAQD----------GHTRPV--TCLAVGRSRLCSGSMDNTIR 258
G +V A++ AG + GH PV + + + S+DNT R
Sbjct: 1477 GQF-----IVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFSADSRYILTASVDNTAR 1531
Query: 259 VWELDTLEPVMTLNDHTDAPMSLLCWDQF------LLSCSLDHTIKVWFATGRGNLEAAY 312
+W+ P++TL H S++ +F + + S DHT ++W +G+ + Y
Sbjct: 1532 IWDF-LGRPLLTLAGH----QSIVYQARFSPEGNLIATVSADHTARLWDRSGK-TVAVLY 1585
Query: 313 THKEDNGVLALGGLND--PDGKPVLICACNDNTVHLYELPSFMERGRIFSKHE-----VR 365
H+ L G D PDG+ +L+ A ND T L++L GR E VR
Sbjct: 1586 GHQ------GLVGTVDWSPDGQ-MLVTASNDGTARLWDL-----SGRELLTLEGHGNWVR 1633
Query: 366 VIEIGPD-KLFFTGDGAGMLGVWKLLAKP 393
E PD + T G +W + P
Sbjct: 1634 SAEFSPDGRWVLTSSADGTAKLWPVKTLP 1662
Score = 32.3 bits (72), Expect = 6.6, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 13/122 (10%)
Query: 233 GHTRPVTCL--AVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC--WDQFL 288
GH +T L + + S D+T+++W+ E V TL H D S+ QFL
Sbjct: 1053 GHQEAITALDWSADGQYFATASADHTVKLWQRHG-EEVATLRGHEDWVRSVHFSPHHQFL 1111
Query: 289 LSCSLDHTIKVW-FATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLY 347
++ D+T ++W FA + L + N G +L+ A D T L+
Sbjct: 1112 VTSGQDNTARIWNFAGEQLTLCQGHADWVRNAEFNCHG-------QILLTASRDGTARLW 1164
Query: 348 EL 349
+L
Sbjct: 1165 DL 1166
Score = 32.3 bits (72), Expect = 7.3, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 61/152 (40%), Gaps = 30/152 (19%)
Query: 159 FCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEV 216
F GE LT+ +GH V L + SRDGTA W++E G
Sbjct: 1125 FAGEQLTLC---QGHADWVRNAEFNCHGQILLTASRDGTARLWDLEGREIGLCQG----- 1176
Query: 217 YSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD 276
++ V N + DG VTC S D T R+W+L + + L H +
Sbjct: 1177 HTSWVRNAQF---SPDGQW-IVTC-----------SADGTARLWDLSS-QCFAVLKGHQN 1220
Query: 277 APMSLLCWD---QFLLSCSLDHTIKVWFATGR 305
+ L W Q +++ S D T +VW G+
Sbjct: 1221 WVNNAL-WSPDGQHIITSSSDGTARVWSRHGK 1251
Score = 32.0 bits (71), Expect = 8.5, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 84/249 (33%), Gaps = 73/249 (29%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANE 224
L L GH+ + G L K+ + S D TA W E + L G EVY + +
Sbjct: 1253 LGTLRGHDHNIHGARFSLDGQKIVTYSTDNTARLWTKEGTLLTILRGHQKEVYDADFSAD 1312
Query: 225 --MLFAGAQDGHTRPV------TCLAVGRS-------------RLCSGSMDNTIRVWELD 263
+F + D R T G S RL + S D T R+W +
Sbjct: 1313 GRFVFTVSADQTARQWDISQKDTITLTGHSHWVRNAHFNPKGDRLLTVSRDKTARLWTTE 1372
Query: 264 TLEPVMTLNDHT------------------DAPMSLLCWD-------------------- 285
E V L DH A + W+
Sbjct: 1373 G-ECVAVLADHQGWVREGQFSPDGQWIVTGSADKTAQLWNVLGKKLTVLRGHQDAVLNVR 1431
Query: 286 -----QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN 340
Q++++ S D T +VW TGR A H E N DG+ ++ A +
Sbjct: 1432 FSPDSQYIVTASKDGTARVWNNTGRE--LAVLRHYEKN---IFAAEFSADGQ-FIVTASD 1485
Query: 341 DNTVHLYEL 349
DNT ++E+
Sbjct: 1486 DNTAGIWEI 1494
>sp|P25387|GBLP_CHLRE Guanine nucleotide-binding protein subunit beta-like protein
OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1
Length = 318
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 41/246 (16%)
Query: 161 GEGLTMLAKLEGHEKAVSGIALPL--RSDKLFSGSRDGTA--WNIESS------AEFSLD 210
E LT+ A L+GH V+ IA PL S+ L S SRD + W +E S A +L
Sbjct: 2 AETLTLRATLKGHTNWVTAIATPLDPSSNTLLSASRDKSVLVWELERSESNYGYARKALR 61
Query: 211 GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMT 270
G V +V++++ F CL +GS D T+R+W+L+T
Sbjct: 62 GHSHFVQDVVISSDGQF------------CL--------TGSWDGTLRLWDLNTGTTTRR 101
Query: 271 LNDHTDAPMSLL--CWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNG---VLALGG 325
HT +S+ ++ ++S S D TIK+W G E YT E G ++
Sbjct: 102 FVGHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLG----ECKYTIGEPEGHTEWVSCVR 157
Query: 326 LNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKH-EVRVIEIGPD-KLFFTGDGAGM 383
+ P+++ D V ++ L + + + H V + + PD L +G G+
Sbjct: 158 FSPMTTNPIIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGI 217
Query: 384 LGVWKL 389
+W L
Sbjct: 218 AMLWDL 223
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 24/178 (13%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES- 203
+ G R L W G + L+GH V + L K+ SGSRD T W+IE
Sbjct: 1049 ISGSTDRTLKVWDMDSG-ACVHTLQGHTSTVR--CMHLHGSKVVSGSRDATLRVWDIEQG 1105
Query: 204 SAEFSLDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGR 245
S L G + V + +++ +GA D GHT V L
Sbjct: 1106 SCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDG 1165
Query: 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFAT 303
+ SGS+D +IRVW+++T TL H + L+S + D T+KVW T
Sbjct: 1166 LHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDIT 1223
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 41/247 (16%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWN-IESSAEFSLDGPVGEVYSMVVANEML 226
L+GH+ V L +++ SGS D T W+ + +L G G V+S ++ ++
Sbjct: 990 LKGHDDHVI-TCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNII 1048
Query: 227 FAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPV 268
+G+ D GHT V C+ + S++ SGS D T+RVW+++ +
Sbjct: 1049 ISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSCL 1108
Query: 269 MTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLND 328
L H A + + ++S + D+ +K+W + L H L GL+
Sbjct: 1109 HVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLH- 1167
Query: 329 PDGKPVLICACNDNTVHLYELP------SFMERGRIFSKHEVRVIEIGPDKLFFTGDGAG 382
++ D ++ ++++ + M + S E+R + +G+
Sbjct: 1168 ------VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELR------QNILVSGNADS 1215
Query: 383 MLGVWKL 389
+ VW +
Sbjct: 1216 TVKVWDI 1222
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 24/105 (22%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEF-SLDGPVGEVYSMVVANEML 226
L GH+ SG + LR + L SG+ D T W+I + +L GP
Sbjct: 1191 LMGHQSLTSG--MELRQNILVSGNADSTVKVWDITTGQCLQTLSGP-------------- 1234
Query: 227 FAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTL 271
+ H VTCL + + S D T+++W++ T + + L
Sbjct: 1235 -----NKHHSAVTCLQFNSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>sp|Q9JHB4|WDR31_MOUSE WD repeat-containing protein 31 OS=Mus musculus GN=Wdr31 PE=2 SV=1
Length = 367
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 146 CVRG--DECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNI 201
C+ G D+ ++W G M+ + GHE+ ++ IA ++++ FS SRD T W++
Sbjct: 76 CISGGKDKTAVAYNWKTGR---MVKRFTGHEREITKIACIPKANQFFSASRDKTVLMWDL 132
Query: 202 ESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRV 259
+ S+ P ++ GH VT LAV S+LC+GS DN++ +
Sbjct: 133 QGSSH-----PRQQL---------------SGHAMVVTGLAVSPDSSQLCTGSRDNSLLL 172
Query: 260 WELDTLEPVMTLNDHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATG 304
W++ T + V + + ++ LCW + +++ S D TI++W + G
Sbjct: 173 WDVGTGQCVERASVSRNL-VTHLCWVPSEPYIVQTSEDKTIRLWDSRG 219
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 168 AKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVAN- 223
A L GHE V + + D L +GS D T W I+ ++L G G V++ ++
Sbjct: 249 AVLRGHEDHVI-TCMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQC 307
Query: 224 -EMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
+ +G+ D GHT V C+A+ S L +GS D T+RVW++++
Sbjct: 308 GRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVES 367
Query: 265 LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFA-TGR 305
+ TL+ H A + ++S D T+K+W A TGR
Sbjct: 368 GRHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGR 409
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 147 VRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204
V G R + W +G ++L L+GH V +A+ L +GSRD T W++ES
Sbjct: 312 VSGSTDRTVKVWSTVDG-SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESG 368
Query: 205 AEF-SLDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVG- 244
+L G V + + +G D GH V L
Sbjct: 369 RHLATLHGHHAAVRCVQFDGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFES 428
Query: 245 -RSRLCSGSMDNTIRVWEL---DTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW 300
RS +CSGS+D +IRVW+ + E V L HT + L+SC+ D ++VW
Sbjct: 429 ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVW 488
Query: 301 FATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF 359
+ H+ + + +L G+ ++ + +D TV L+++ ERG +
Sbjct: 489 DIHEGTCVHMLSGHR--SAITSLQWF----GRNMVATSSDDGTVKLWDI----ERGALI 537
>sp|Q91WM3|U3IP2_MOUSE U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus
GN=Rrp9 PE=1 SV=1
Length = 475
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLF 227
L GH+ +++ + + +FS ++D T W++E+ G ++ +
Sbjct: 142 LRGHQLSITCLVITPDDLAIFSAAKDCTIIKWSVET----------GRKLHVIPRAKKGA 191
Query: 228 AGAQDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAP--MSLLC 283
G GH+ V C+A+ L SG I +WE + + + T H DA ++
Sbjct: 192 QGQPAGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRK 251
Query: 284 WDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNT 343
L S S D ++KVW A +E + H++ A+ L+ + + D T
Sbjct: 252 GTHQLYSTSHDRSVKVWNAAENSYVETLFGHQD-----AVAALDALSRECCVTAGGRDGT 306
Query: 344 VHLYELPSFMERGRIFSKHE--VRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392
V ++++P E +F H+ + I + ++ +G G + +W L K
Sbjct: 307 VRVWKIPE--ESQLVFYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKK 355
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae
GN=BRAFLDRAFT_59218 PE=3 SV=1
Length = 406
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 11/124 (8%)
Query: 233 GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ---F 287
GH P+T + S + S S D TI++W+ +T + TL HTDA + + +DQ
Sbjct: 104 GHRSPITRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDA-VQDVSFDQQGKL 162
Query: 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLY 347
L SCS D TIK+W N++ + H D+ V ++ + P+G LI A D T+ ++
Sbjct: 163 LASCSADMTIKLWDFQTFENIKTMHGH--DHNVSSVHFM--PNGD-FLISASRDKTIKMW 217
Query: 348 ELPS 351
EL +
Sbjct: 218 ELAT 221
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 89/229 (38%), Gaps = 54/229 (23%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES---------------SAEFSL 209
+ + GH+ VS + D L S SRD T W + + + +
Sbjct: 183 IKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCVKTFTGHREWVRTVRVNQ 242
Query: 210 DGPV-------GEVYSMVVANEMLFAGAQDGHTRPVTCLA------------------VG 244
DG + V VVAN+ A ++ H V C+A G
Sbjct: 243 DGSLLASCSNDQTVRVWVVANKECKAELRE-HEHVVECIAWAPESCNGHVSEVMGAEKKG 301
Query: 245 RS--RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD---QFLLSCSLDHTIKV 299
RS L SGS D TI++W++ T +MTL H D + + W ++++S S D TI+V
Sbjct: 302 RSGPFLLSGSRDKTIKMWDISTGVCIMTLVGH-DNWVRGVVWHPGGKYIISASDDKTIRV 360
Query: 300 WFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYE 348
W + + H+ ++ P +I D TV ++E
Sbjct: 361 WDYKNKRCQKTLEAHQH-----FCTSIDFHRSAPYVITGSVDQTVKVWE 404
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 80/182 (43%), Gaps = 35/182 (19%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE 224
LA E H +V+ + R +FS S DGT AW++ + N
Sbjct: 380 LATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDL-----------------IRYRNF 422
Query: 225 MLFAGAQDGHTRPVTCLAVGRS--RLCSGSMDN-TIRVWELDTLEPVMTLNDHTDAPMSL 281
F G + CLAV S +C+GS+DN I VW + T + + L+ H + P+S
Sbjct: 423 RTFTGTERIQ---FNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGH-EGPVSC 478
Query: 282 LCWDQ---FLLSCSLDHTIKVWFATGRG-NLEAAYTHKEDNGVLALGGLNDPDGKPVLIC 337
L + Q L S S D TI++W GR +E + + VLAL PDGK V +
Sbjct: 479 LSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSD---VLALSM--RPDGKEVAVS 533
Query: 338 AC 339
Sbjct: 534 TL 535
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 231 QDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD--Q 286
Q GH LA SR+ + S D I+VW++ + + T +HT + ++ Q
Sbjct: 341 QQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQ 400
Query: 287 FLLSCSLDHTIKVWFATGRGNLEAAY-THKEDNGVLALGGLNDPDGKPVLICACNDNTVH 345
+ S SLD T++ W N T + LA+ DP G+ V + ++ +H
Sbjct: 401 VMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQFNCLAV----DPSGEVVCAGSLDNFDIH 456
Query: 346 LYELPS 351
++ + +
Sbjct: 457 VWSVQT 462
>sp|Q09855|POF11_SCHPO F-box/WD repeat-containing protein pof11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof11 PE=1 SV=2
Length = 506
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 186 SDKLFSGSRDGTAWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGR 245
+D+ F + D + + ++ E + G S+ N GH+ V CL R
Sbjct: 213 ADQDFRATLD-SVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCR 271
Query: 246 SR--LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFAT 303
R L SGS D+TI +W+ P+ HTD + ++ + +++S S DHT +VW
Sbjct: 272 RRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLD 331
Query: 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351
EA H + ++ + +++ A +D T+ +++ +
Sbjct: 332 ATSPAEAC-MHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITT 378
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 40/234 (17%)
Query: 166 MLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVAN 223
+L KL GH +V + R + L SGS D T W+ ++ +VY
Sbjct: 253 ILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPL-------KVYF----- 300
Query: 224 EMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEP----VMTLNDHTDAPM 279
GHT V + V + + S S D+T RVW LD P + L H +
Sbjct: 301 ---------GHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVN 351
Query: 280 SLLCWDQ--FLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLIC 337
S+ + +++ S D T++ W T + + H+ G ++
Sbjct: 352 SVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNG-------KFIVS 404
Query: 338 ACNDNTVHLYELPSFMERGRIFSKHE--VRVIEIGPDKLFFTGDGAGMLGVWKL 389
+D T+ ++E S + R+ HE +R + +K+ +G G + +W
Sbjct: 405 GSSDLTIRIFEASS-GKLLRMLQGHEDLIRTVRFNDEKI-VSGGYDGTVRIWNF 456
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 172 GHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAE-----FSLDGPVGEVYSMVVANE 224
GH V G+ + + + S SRD TA W +++++ L G + V S+ +++
Sbjct: 301 GHTDNVLGVVVS--ENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSK 358
Query: 225 --MLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
++ + D H R + C + SGS D TIR++E +
Sbjct: 359 TGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVSGSSDLTIRIFEASS 418
Query: 265 LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVW-FATG 304
+ + L H D ++ D+ ++S D T+++W F TG
Sbjct: 419 GKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTG 459
Score = 32.3 bits (72), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/153 (18%), Positives = 61/153 (39%), Gaps = 22/153 (14%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNI-------------------ESSAEFS 208
L GH +V+ + ++ + + S D T W+I + + +F
Sbjct: 343 LRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFI 402
Query: 209 LDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPV 268
+ G + A+ GH + + ++ SG D T+R+W +T E
Sbjct: 403 VSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQH 462
Query: 269 MTLNDHTDAPMSLLCWD-QFLLSCSLDHTIKVW 300
L++ ++ + L +D + +++C+ I VW
Sbjct: 463 CVLHNSRNSRVFGLQFDHRRIIACTHSSEILVW 495
>sp|D4AM37|SCONB_ARTBC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS
112371) GN=sconB PE=3 SV=1
Length = 663
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+++T + + TL H L D L+S S
Sbjct: 320 GHTNGVMCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKLISGS 379
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
LD TIKVW G + YT + GVL L L DNT+ ++ +F
Sbjct: 380 LDRTIKVWNWRS-GECISTYTGHQ-GGVLCLHF-----DSTTLASGSKDNTIKIW---NF 429
Query: 353 MERG-RIFSKHEVRVIEIGPD---KLFFTGDGAGMLGVWKL 389
++ RI H V + D + F+ + +W L
Sbjct: 430 HDKSTRILRGHADWVNSVKLDTASRTVFSASDDLTVRIWDL 470
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWEL 262
GH PVTC+++ SR+ +GS D+ +R++
Sbjct: 632 GHRGPVTCVSLSDSRMATGSEDSEVRMYSF 661
>sp|D4D8P3|SCONB_TRIVH Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Trichophyton verrucosum (strain HKI 0517) GN=sconB
PE=3 SV=1
Length = 663
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+++T + + TL H L D L+S S
Sbjct: 320 GHTNGVMCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKLISGS 379
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
LD TIKVW G + YT + GVL L L DNT+ ++ +F
Sbjct: 380 LDRTIKVWNWRS-GECISTYTGHQ-GGVLCLHF-----DSTTLASGSKDNTIKIW---NF 429
Query: 353 MERG-RIFSKHEVRVIEIGPD---KLFFTGDGAGMLGVWKL 389
++ RI H V + D + F+ + +W L
Sbjct: 430 HDKSTRILRGHADWVNSVKLDTASRTVFSASDDLTVRIWDL 470
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWEL 262
GH PVTC+++ SR+ +GS D+ +R++
Sbjct: 632 GHRGPVTCVSLSDSRMATGSEDSEVRMYSF 661
>sp|B6Q4Z5|SCONB_PENMQ Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59
/ QM 7333) GN=sconB PE=3 SV=1
Length = 660
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+++T E + TL HT L + L+S S
Sbjct: 340 GHTNGVMCLQFEDNILATGSYDTTIKIWDMETGEELRTLTGHTSGIRCLQFDETKLISGS 399
Query: 293 LDHTIKVW-------FATGRGNLEAAYTHKEDNGVLALGGLN 327
+D T+KVW +T G+L N +LA G +
Sbjct: 400 IDRTLKVWNWRTGECISTYTGHLGGIIGLHFQNSILASGSTD 441
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 83/211 (39%), Gaps = 46/211 (21%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLF 227
+GH V + L + L +GS D T W++E+ E
Sbjct: 338 FKGHTNGV--MCLQFEDNILATGSYDTTIKIWDMETGEELR------------------- 376
Query: 228 AGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQF 287
GHT + CL ++L SGS+D T++VW T E + T H + L +
Sbjct: 377 --TLTGHTSGIRCLQFDETKLISGSIDRTLKVWNWRTGECISTYTGHLGGIIGLHFQNSI 434
Query: 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLND-------PDGKPVLICACN 340
L S S D T+K+W + ED L G +D ++ A +
Sbjct: 435 LASGSTDKTVKIW-------------NFEDKSTFLLRGHSDWVNAVRVDSCSRTVLSASD 481
Query: 341 DNTVHLYELPSFMERGRIFSKHEVRVIEIGP 371
D TV L++L S + R F H +V ++ P
Sbjct: 482 DCTVKLWDLDS-KQCIRTFQGHVGQVQQVIP 511
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 40/250 (16%)
Query: 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLD 210
+ +H W G L LEGH V +A L SGS D T W++ ++ E ++
Sbjct: 481 KLIHVWDVASG-DELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAV- 538
Query: 211 GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPV 268
+GHT V +A S + SGS D T R+W + T
Sbjct: 539 --------------------FEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEH 578
Query: 269 MTLNDHTDAPMSLLCWDQ--FLLSCSLDHTIKVW-FATGRGNLEAAYTHKEDNGVLALGG 325
L HTD ++ + S S D TI++W ATG+ E V++L
Sbjct: 579 AVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGK---ERDVLQAPAENVVSLA- 634
Query: 326 LNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHE--VRVIEIGPD-KLFFTGDGAG 382
PDG ++ +D+TVHL+++ S E F H VR + PD L +G
Sbjct: 635 -FSPDGS--MLVHGSDSTVHLWDVAS-GEALHTFEGHTDWVRAVAFSPDGALLASGSDDR 690
Query: 383 MLGVWKLLAK 392
+ +W + A+
Sbjct: 691 TIRLWDVAAQ 700
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 168 AKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFS-LDGPVGEVYSMVVANE 224
A EGH V IA + SGSRDGTA WN+ + E + L G VY++ + +
Sbjct: 537 AVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPD 596
Query: 225 --MLFAGAQDGHTRPVTCLAVGRSRLC---------------SGSM-----DNTIRVWEL 262
M+ +G++DG R + +A G+ R GSM D+T+ +W++
Sbjct: 597 GSMVASGSRDGTIR-LWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDV 655
Query: 263 DTLEPVMTLNDHTD--APMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGV 320
+ E + T HTD ++ L S S D TI++W + H E
Sbjct: 656 ASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHS 715
Query: 321 LALGGLNDPDGKPVLICACNDNTVHLYEL 349
+A P+G L A D T+ ++ +
Sbjct: 716 VAF----HPEGT-TLASASEDGTIRIWPI 739
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 73/169 (43%), Gaps = 27/169 (15%)
Query: 158 WFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFS-LDGPVG 214
W G T A L+GH V +A + SGSRDGT W++ + E L P
Sbjct: 570 WNVATG-TEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAE 628
Query: 215 EVYSMVVANE--MLFAGAQ-----------------DGHTRPVTCLAVGR--SRLCSGSM 253
V S+ + + ML G+ +GHT V +A + L SGS
Sbjct: 629 NVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSD 688
Query: 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ--FLLSCSLDHTIKVW 300
D TIR+W++ E TL HT+ S+ + L S S D TI++W
Sbjct: 689 DRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 26/114 (22%)
Query: 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGP 212
+H W G L EGH V +A L SGS D T W++ + E +
Sbjct: 650 VHLWDVASG-EALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHT---- 704
Query: 213 VGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDT 264
+GHT PV +A + L S S D TIR+W + T
Sbjct: 705 -----------------TLEGHTEPVHSVAFHPEGTTLASASEDGTIRIWPIAT 741
>sp|C5FP68|SCONB_ARTOC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480)
GN=sconB PE=3 SV=1
Length = 674
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+++T + + TL H L D L+S S
Sbjct: 336 GHTNGVMCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKLISGS 395
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYEL 349
LD TIKVW + G + YT + GVL L L DNT+ ++
Sbjct: 396 LDRTIKVW-SWRSGECISTYTGHQ-GGVLCLHF-----DSTTLASGSKDNTIKIWNF 445
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 18/70 (25%)
Query: 211 GPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGS 252
G + V+ + L +GAQD GH PVTC+++ SR+ +GS
Sbjct: 603 GHIEGVWGLAADTLRLVSGAQDHMTKVWDPRTGTCERTFTGHRGPVTCVSLSDSRMATGS 662
Query: 253 MDNTIRVWEL 262
D +R++
Sbjct: 663 EDCEVRMYSF 672
>sp|Q8IZU2|WDR17_HUMAN WD repeat-containing protein 17 OS=Homo sapiens GN=WDR17 PE=2 SV=2
Length = 1322
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 248 LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ----FLLSCSLDHTIKVWFAT 303
LCSGS D T+R+W+ + LN HT AP+ L W+ L+S S D+TIKVW
Sbjct: 582 LCSGSDDGTVRIWDYTQDACINILNGHT-APVRGLMWNTEIPYLLISGSWDYTIKVWDTR 640
Query: 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN-DNTVHLYELPSFMERGRI 358
++ Y H D + GL +P + +C+ D+TV L+ L + + +I
Sbjct: 641 EGTCVDTVYDHGAD-----VYGLTCHPSRPFTMASCSRDSTVRLWSLTALVTPVQI 691
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 56/147 (38%), Gaps = 30/147 (20%)
Query: 167 LAKLEGHEKAVSGIAL-PLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVAN 223
L GH V + PLR L SGS DGT W+ A ++
Sbjct: 559 LKVFSGHTAKVFHVKWSPLREGILCSGSDDGTVRIWDYTQDACINI-------------- 604
Query: 224 EMLFAGAQDGHTRPVTCLAVGRS---RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMS 280
+GHT PV L L SGS D TI+VW+ V T+ DH
Sbjct: 605 -------LNGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGTCVDTVYDHGADVYG 657
Query: 281 LLCWDQ---FLLSCSLDHTIKVWFATG 304
L C + SCS D T+++W T
Sbjct: 658 LTCHPSRPFTMASCSRDSTVRLWSLTA 684
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 27/174 (15%)
Query: 233 GHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD---QF 287
GH + + L + L SGS D T+ +W+++ E + L HTD ++ + + QF
Sbjct: 386 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQF 443
Query: 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLY 347
+ + SLD I++W ++G +E + H+E +A PDGK L+ DNT+ L+
Sbjct: 444 IAAGSLDKVIRIWTSSGT-LVEQLHGHEESVYSVAFS----PDGK-YLVSGSLDNTIKLW 497
Query: 348 EL-------PSFMERGRI----FSKHE--VRVIEIGPD-KLFFTGDGAGMLGVW 387
EL PS + G I F+ H+ + + + PD K +G + W
Sbjct: 498 ELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 41/170 (24%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSL----DGPVGEVYSMVVAN 223
L GHE+ + + L SGS D T W++E+ + + DG ++S
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSP--DG 441
Query: 224 EMLFAGAQD-----------------GHTRPVTCLAVGR--SRLCSGSMDNTIRVWELD- 263
+ + AG+ D GH V +A L SGS+DNTI++WEL
Sbjct: 442 QFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQC 501
Query: 264 --TLEPVM---------TLNDHTDAPMSLLCWD--QFLLSCSLDHTIKVW 300
+ P M T H D +S+ ++++S S D TI+ W
Sbjct: 502 VSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFW 551
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVA 222
T++ +L GHE++V +A L SGS D T W ++ + + +Y
Sbjct: 461 TLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVA-----PSMYKEGGI 515
Query: 223 NEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLL 282
+ F G +D VT G+ + SGS D TI+ W D+ +TL H ++ +S+
Sbjct: 516 CKQTFTGHKD-FILSVTVSPDGK-WIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA 573
Query: 283 CWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317
C FATG G+L A ED
Sbjct: 574 VSPNG--HC---------FATGSGDLRARIWSYED 597
>sp|Q54PE0|PWP2_DICDI Periodic tryptophan protein 2 homolog OS=Dictyostelium discoideum
GN=pwp2 PE=3 SV=1
Length = 922
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEF----SLDGPVGEV-Y 217
T + K +GH ++ +A + +G DG WN S + +GPV V Y
Sbjct: 349 TYILKQQGHSYNMNTVAYSPDGQTIATGGEDGKVKIWNTTSGYCYITFTEHEGPVTAVKY 408
Query: 218 SMVVANEMLFAGAQDGHTRPV-------------------TCLAVGRS--RLCSGSMDN- 255
S V + ++F+ DG R +CLAV S + +GS+D+
Sbjct: 409 SPVSSQNVVFSAGVDGTIRAFDLVRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLDSF 468
Query: 256 TIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ---FLLSCSLDHTIKVWFATGRGNLEAAY 312
I VW + T L+ H +P+ L +D FL S S D + K+W + +
Sbjct: 469 EIYVWSVRTGRLTDILSGH-QSPVCELAFDPINPFLASASWDKSCKIWNIFEDREIRESI 527
Query: 313 THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEV 364
H D L DGK I +C D T+ +YE ++ + G I K+++
Sbjct: 528 QHTSD----VLTCAYSQDGKK-FIVSCLDGTIQIYETSTWGQIGLIDGKNDI 574
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Query: 233 GHTRPVTCLAVGRS--RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSL--LCWDQFL 288
GHT V C+ S R+ +GS+ ++R+W+L+ + + TL H + SL ++L
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL 120
Query: 289 LSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYE 348
S S+D IK+W +G + H + LA PDGK L A +D+TV L++
Sbjct: 121 ASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFS----PDGK-WLASASDDSTVKLWD 175
Query: 349 LPSFMERGRI---FSKH--EVRVIEIGPDK-LFFTGDGAGMLGVWKL 389
L + G++ F+ H V V++ P++ L +G + +W L
Sbjct: 176 LIA----GKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 29/146 (19%)
Query: 162 EGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSM 219
E +L L GH+ ++S + + L SGS D W++ G V+
Sbjct: 93 EAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRK---------GCVFRY 143
Query: 220 VVANEMLFAGAQDGHTRPVTCLAVGRSR--LCSGSMDNTIRVWELDTLEPVMTLNDHTDA 277
GHT+ V CLA L S S D+T+++W+L + + HT A
Sbjct: 144 ------------KGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 278 PMSLLCW--DQFLL-SCSLDHTIKVW 300
++++ + +++LL S S D T+K+W
Sbjct: 192 -VNVVQFHPNEYLLASGSADRTVKLW 216
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 15/132 (11%)
Query: 227 FAGAQDGHTRPVTCLAVGRS--RLCSGSMDNTIRVWELDTLEPVMTL--NDHTDAPMSLL 282
F GHT V LA S L S S D T+++W+ T E MTL +DH + + L
Sbjct: 141 FERTLRGHTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFL 200
Query: 283 CWDQFLLSCSLDHTIKVW-FATGR--GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC 339
FLLS S D TIK+W ATG N E H+E +A+ DG + C+
Sbjct: 201 PSGDFLLSSSRDKTIKMWEVATGYCVYNFEG---HREWVRRVAVAS----DGSLMASCS- 252
Query: 340 NDNTVHLYELPS 351
ND TV ++ L S
Sbjct: 253 NDQTVRIWSLSS 264
Score = 40.8 bits (94), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 233 GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD---QF 287
GH P+TC+ + + S S D ++++W+ ++ + TL HTD+ L +D +
Sbjct: 105 GHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQD-LAFDSSGKL 163
Query: 288 LLSCSLDHTIKVW-FATGRGNLEAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVH 345
L S S D T+K+W F T E T + D+ V ++ L P G L+ + D T+
Sbjct: 164 LASSSADMTVKIWDFQT----FECRMTLRGHDHNVSSVCFL--PSGD-FLLSSSRDKTIK 216
Query: 346 LYELPS 351
++E+ +
Sbjct: 217 MWEVAT 222
Score = 38.5 bits (88), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 75/204 (36%), Gaps = 48/204 (23%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTAWNIESSAEFSLDGPVGEVYSMVVANEMLFAG 229
L GH+ VS + D L S SRD T E + + VY+
Sbjct: 187 LRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVATGYC-------VYNF---------- 229
Query: 230 AQDGHTRPVTCLAVGR--SRLCSGSMDNTIRVWELDTLEPVMTLNDHTD-------APMS 280
+GH V +AV S + S S D T+R+W L + E L H AP S
Sbjct: 230 --EGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHEHVVECIKWAPES 287
Query: 281 LLCWDQ---------------FLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGG 325
+ FL S S D IK+W T L + H DN V G
Sbjct: 288 CNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVCLFSLVGH--DNWV---RG 342
Query: 326 LNDPDGKPVLICACNDNTVHLYEL 349
L G L A +D T+ ++EL
Sbjct: 343 LAFHAGGKYLTSASDDKTIKIWEL 366
Score = 35.8 bits (81), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 169 KLEGHEKAVSGIALPLRSDKLFSGSRDGTAW-NIESSAEFSLDGPVGEVYSMVVANEMLF 227
+L GHE V I S + GT + S F G V + +
Sbjct: 270 ELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLASGSRDRVIKIWDVTTAVC 329
Query: 228 AGAQDGHTRPVTCLA--VGRSRLCSGSMDNTIRVWEL------DTLEP----VMTLNDHT 275
+ GH V LA G L S S D TI++WEL +LE V T++ H
Sbjct: 330 LFSLVGHDNWVRGLAFHAGGKYLTSASDDKTIKIWELRHKRCSKSLEAHNHFVTTIDFHR 389
Query: 276 DAPMSLLCWDQFLLSCSLDHTIKVW 300
+P F+++ S+D TIKVW
Sbjct: 390 SSP--------FVITGSVDLTIKVW 406
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIES-SAEFSLDGPVGEVYSMVV--ANE 224
L GH ++ + + + S S D + W+ ES E +L G V + + +
Sbjct: 103 LSGHRSPITCVVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRGHTDSVQDLAFDSSGK 162
Query: 225 MLFAGAQD------------------GHTRPVT--CLAVGRSRLCSGSMDNTIRVWELDT 264
+L + + D GH V+ C L S S D TI++WE+ T
Sbjct: 163 LLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGDFLLSSSRDKTIKMWEVAT 222
Query: 265 LEPVMTLNDHTD--APMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHK 315
V H + +++ + SCS D T+++W + + E H+
Sbjct: 223 GYCVYNFEGHREWVRRVAVASDGSLMASCSNDQTVRIWSLSSKECKEELRGHE 275
>sp|Q00659|SCONB_EMENI Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=sconB PE=3 SV=2
Length = 678
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 347 GHTNGVMCLQFEDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLISGS 406
Query: 293 LDHTIKVW 300
+D TIKVW
Sbjct: 407 MDRTIKVW 414
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH + CL ++L SGSMD TI+VW T E + T H + L L S S
Sbjct: 387 GHESGIRCLQFDDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGS 446
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
+D T+K+W N E T + + + A +D TV L++L +
Sbjct: 447 VDKTVKIW------NFEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDT- 499
Query: 353 MERGRIFSKHEVRVIEIGP 371
R F H +V ++ P
Sbjct: 500 KTCIRTFHGHVGQVQQVVP 518
Score = 36.2 bits (82), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 27/119 (22%)
Query: 158 WFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGE 215
W GE ++ GH V I L + L SGS D T WN E + FSL G
Sbjct: 416 WRTGECISTYT---GHRGGV--IGLHFDASILASGSVDKTVKIWNFEDKSTFSLRGHTDW 470
Query: 216 VYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDH 274
V ++ V D +R V S S D T+R+W+LDT + T + H
Sbjct: 471 VNAVRV----------DTSSRTV----------FSASDDCTVRLWDLDTKTCIRTFHGH 509
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
GH+ PVTC+ +G SR +GS D +R++ +
Sbjct: 647 GHSGPVTCIGLGDSRFATGSEDCEVRMYSFQS 678
>sp|Q54SF9|MHCKD_DICDI Myosin heavy chain kinase D OS=Dictyostelium discoideum GN=mhkD
PE=3 SV=1
Length = 941
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 100/262 (38%), Gaps = 72/262 (27%)
Query: 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVG------- 214
LT + L GH++ V + + KL+S S DG WN+ ++ + S +
Sbjct: 627 LTSIVHLSGHDERVCSLLINQDKTKLYSASADGYVKIWNLTNNEDLSKIQMIDSFRAHRR 686
Query: 215 EVYSMVVANEMLFAGAQDG------------------------------------HTRPV 238
+ M++ + LF + DG HT V
Sbjct: 687 SIEKMLLNEKYLFTASSDGTIKIWSLPTTTTTTTTSKQSSSSSSSSYECIGKLEDHTAEV 746
Query: 239 T--CLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHT 296
C+ + + L S S D I++++L T + + +LN H + S+ ++L S S D +
Sbjct: 747 NDMCIDIENNFLVSCSFDKQIKIYDLSTFKCIKSLNAHGKSIKSIYMSGKYLFSSSNDQS 806
Query: 297 IKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV---------LICACNDNTVHLY 347
IK+W +LE + + G+ND P+ L A D + +
Sbjct: 807 IKIW------DLEMC---------MCVYGMNDAHDAPITSLRMFGNRLFSASKDGEIKDW 851
Query: 348 ELPSFMERGRIFSKHEVRVIEI 369
L +F + +H + + +I
Sbjct: 852 NLSTF-QPTTTLDQHNMAITDI 872
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGTAWNIESSAEF----SLDGPVGEVYSMVVA 222
+ KLE H V+ + + + ++ L S S D I + F SL+ + S+ ++
Sbjct: 736 IGKLEDHTAEVNDMCIDIENNFLVSCSFDKQI-KIYDLSTFKCIKSLNAHGKSIKSIYMS 794
Query: 223 NEMLFA-------------------GAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELD 263
+ LF+ G D H P+T L + +RL S S D I+ W L
Sbjct: 795 GKYLFSSSNDQSIKIWDLEMCMCVYGMNDAHDAPITSLRMFGNRLFSASKDGEIKDWNLS 854
Query: 264 TLEPVMTLNDHTDAPMSLLCWDQ-FLLSCSLDHTIKVWFATGRGN----LEAAYTHKEDN 318
T +P TL+ H A +L +L S D TI++ + + + + H+ +
Sbjct: 855 TFQPTTTLDQHNMAITDILVTSNGYLFVSSDDSTIRIIDISNQNEPIKIISSTKAHR--S 912
Query: 319 GVLALGGLNDPDGKPVLICACNDNTVHLY 347
GV +L DGK + C DN + ++
Sbjct: 913 GVNSLAT----DGKRIFSGGC-DNLIKVW 936
>sp|Q4X0A9|SCONB_ASPFU Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=sconB PE=3 SV=1
Length = 696
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH+ + CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 365 GHSNGIMCLQFEDNILATGSYDATIKIWDTETGEELRTLKGHQSGIRCLQFDDTKLISGS 424
Query: 293 LDHTIKVW 300
+DHT+KVW
Sbjct: 425 MDHTLKVW 432
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH + CL ++L SGSMD+T++VW T E + T + H + L L S S
Sbjct: 405 GHQSGIRCLQFDDTKLISGSMDHTLKVWNWRTGECISTYSGHRGGVVGLHFDATILASGS 464
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
+D T+K+W N E T + + + A +D TV L++L +
Sbjct: 465 VDKTVKIW------NFEDKSTCLLRGHTDWVNAVRVDSASRTVFSASDDCTVKLWDLDT- 517
Query: 353 MERGRIFSKHEVRVIEIGP 371
R F H +V ++ P
Sbjct: 518 KSCIRTFHGHVGQVQQVVP 536
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
GH+ PVTC+ +G SR +GS D +R++ T
Sbjct: 665 GHSGPVTCIGLGDSRFATGSEDCEVRMYSFQT 696
>sp|B0XTS1|SCONB_ASPFC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=sconB PE=3 SV=1
Length = 696
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH+ + CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 365 GHSNGIMCLQFEDNILATGSYDATIKIWDTETGEELRTLKGHQSGIRCLQFDDTKLISGS 424
Query: 293 LDHTIKVW 300
+DHT+KVW
Sbjct: 425 MDHTLKVW 432
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH + CL ++L SGSMD+T++VW T E + T + H + L L S S
Sbjct: 405 GHQSGIRCLQFDDTKLISGSMDHTLKVWNWRTGECISTYSGHRGGVVGLHFDATILASGS 464
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
+D T+K+W N E T + + + A +D TV L++L +
Sbjct: 465 VDKTVKIW------NFEDKSTCLLRGHTDWVNAVRVDSASRTVFSASDDCTVKLWDLDT- 517
Query: 353 MERGRIFSKHEVRVIEIGP 371
R F H +V ++ P
Sbjct: 518 KSCIRTFHGHVGQVQQVVP 536
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
GH+ PVTC+ +G SR +GS D +R++ T
Sbjct: 665 GHSGPVTCIGLGDSRFATGSEDCEVRMYSFQT 696
>sp|Q8NA23|WDR31_HUMAN WD repeat-containing protein 31 OS=Homo sapiens GN=WDR31 PE=2 SV=1
Length = 367
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 33/168 (19%)
Query: 146 CVRG--DECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNI 201
CV G D+ ++W G ++ + +GHE ++ +A +S + FS SRD W++
Sbjct: 76 CVSGGKDKTVVAYNWKTGN---VVKRFKGHEHEITKVACIPKSSQFFSASRDRMVMMWDL 132
Query: 202 ESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRV 259
S++ P ++ GH VT LAV S+LC+GS DNT+ +
Sbjct: 133 HGSSQ-----PRQQLC---------------GHAMVVTGLAVSPDSSQLCTGSRDNTLLL 172
Query: 260 WELDTLEPVMTLNDHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATG 304
W++ T + V + + ++ LCW + ++L S D T+++W + G
Sbjct: 173 WDVVTGQSVERASVSRNV-VTHLCWVPREPYILQTSEDKTLRLWDSRG 219
>sp|B6GZA1|SCONB_PENCW Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075
/ Wisconsin 54-1255) GN=sconB PE=3 SV=1
Length = 673
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 32/182 (17%)
Query: 170 LEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLF 227
+GH +V + L + L +GS D T W+ ++ E
Sbjct: 339 FKGHRDSV--MCLQFEDNILMTGSYDATVKIWDTDTGEELR------------------- 377
Query: 228 AGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQF 287
GH V CL ++L +GS+D +IRVW T E + N H +A ++L
Sbjct: 378 --TLKGHVAGVRCLQFDDTKLITGSLDRSIRVWNWRTGECISKYNGHAEAVIALHFDCTL 435
Query: 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLY 347
L S S+D T+K+W + H + + + ++ ++ AC+D L+
Sbjct: 436 LASASVDRTVKIWNFKDKSTF--VLPHPQGVNAVKIDSVSR-----TVLTACDDGAARLW 488
Query: 348 EL 349
+L
Sbjct: 489 DL 490
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 34/148 (22%)
Query: 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVG 214
+W GE ++K GH +AV IAL L S S D T WN + + F L P G
Sbjct: 409 NWRTGE---CISKYNGHAEAV--IALHFDCTLLASASVDRTVKIWNFKDKSTFVLPHPQG 463
Query: 215 EVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDH 274
V +V R+ L + D R+W+LDT + ++H
Sbjct: 464 --------------------VNAVKIDSVSRTVL-TACDDGAARLWDLDTKTCIRVFHNH 502
Query: 275 TDAPMSLLC------WDQFLLSCSLDHT 296
A ++ + L C DH
Sbjct: 503 IGAVQQVIALPREIELENHLADCENDHV 530
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + SGS D T+RVW+++T E + TL H +A + L + +++CS
Sbjct: 260 GHTGSVLCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANGIMVTCS 319
Query: 293 LDHTIKVW 300
D +I VW
Sbjct: 320 KDRSIAVW 327
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 216 VYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275
V+ MV ++ GH V + + S S D TI+VW +DTLE V TL H
Sbjct: 326 VWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHR 385
Query: 276 DAPMSLLCWDQFLLSCSLDHTIKVW 300
L + ++S S D+TI++W
Sbjct: 386 RGIACLQYRGRLVVSGSSDNTIRLW 410
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 224 EMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC 283
+M Q +++ V CL ++ SG DNTI++W+ L+ HT + + L
Sbjct: 211 KMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY 270
Query: 284 WDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNT 343
++ ++S S D T++VW ++ H E VL L N +++ D +
Sbjct: 271 DNRVIISGSSDATVRVWDVETGECIKTLIHHCE--AVLHLRFAN-----GIMVTCSKDRS 323
Query: 344 VHLYEL--PSFMERGRIFSKHE--VRVIEIGPDKLFFTGDGAGMLGVWKL 389
+ ++++ P + R+ H V V++ D+ + G + VW +
Sbjct: 324 IAVWDMVSPRDITIRRVLVGHRAAVNVVDFD-DRYIVSASGDRTIKVWSM 372
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 35/194 (18%)
Query: 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTAWNIESSAEFSLDGPVGEVYSMVVAN 223
+T+ L GH AV+ + R SG R W++++
Sbjct: 335 ITIRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDT-------------------- 374
Query: 224 EMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC 283
+ F GH R + CL + SGS DNTIR+W++ + + L H + +
Sbjct: 375 -LEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRF 433
Query: 284 WDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV--------L 335
++ ++S + D IKVW +L+AA + + + L L G+ +
Sbjct: 434 DEKRIVSGAYDGKIKVW------DLQAALDPRALSSEICLCSLVQHTGRVFRLQFDDFQI 487
Query: 336 ICACNDNTVHLYEL 349
+ + +D+T+ +++
Sbjct: 488 VSSSHDDTILIWDF 501
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 91/210 (43%), Gaps = 35/210 (16%)
Query: 167 LAKLEGHEKAVSGIAL--PLRSDKLFSGSRDGTA--WNIESSAEF-SLDGPVGEVYSMVV 221
L LEGH V IA P DK+ +GS D T W++E+ + + G E+ +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPY-GDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 222 --ANEMLFAGAQD------------------GHTRPVTCLAVGRS--RLCSGSMDNTIRV 259
+ ++ G+ D GH+ + L+ S R+ +GS D+T+ V
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Query: 260 WELDTLEPVMTLNDH-TDAPMSLLCWD-QFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317
WE DT V TL H + ++ WD +L+ S+D T K+W A G A T +D
Sbjct: 246 WEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV-NGKCVATLTGHDD 304
Query: 318 NGVLALGGLNDPDGKPVLICACNDNTVHLY 347
L D GK ++ A D T ++
Sbjct: 305 E---ILDSCFDYTGK-LIATASADGTARIF 330
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQF----LLSCSLDHTIKVW 300
+RL +GS D T R+W+ T + + L HTD S C + +++ S D+T ++W
Sbjct: 358 NRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFS--CAFNYKGDIIITGSKDNTCRIW 414
>sp|A1DHW6|SCONB_NEOFI Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=sconB PE=3 SV=1
Length = 689
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH+ + CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 358 GHSNGIMCLQFEDNILATGSYDATIKIWDTETGEELRTLKGHRSGIRCLQFDDTKLISGS 417
Query: 293 LDHTIKVW 300
+DHT+KVW
Sbjct: 418 MDHTLKVW 425
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH + CL ++L SGSMD+T++VW T E + T + H + L L S S
Sbjct: 398 GHRSGIRCLQFDDTKLISGSMDHTLKVWNWRTGECISTYSGHRGGVVGLHFDATILASGS 457
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
+D T+K+W N E T + + + A +D TV L++L +
Sbjct: 458 VDKTVKIW------NFEDKSTCLLRGHTDWVNAVRVDSASRTVFSASDDCTVKLWDLDT- 510
Query: 353 MERGRIFSKHEVRVIEIGP 371
R F H +V ++ P
Sbjct: 511 KSCIRTFHGHVGQVQQVVP 529
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT 264
GH+ PVTC+ +G SR +GS D +R++ T
Sbjct: 658 GHSGPVTCIGLGDSRFATGSEDCEVRMYSFQT 689
>sp|P39014|MET30_YEAST F-box protein MET30 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=MET30 PE=1 SV=1
Length = 640
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH+ V L +L +GS+D TIRVW T E + T H+D+ +S+ + + ++S S
Sbjct: 340 GHSDGVKTLYFDDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGS 399
Query: 293 LDHTIKVWFATGR 305
D T+KVW R
Sbjct: 400 ADKTVKVWHVESR 412
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 11/121 (9%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GH V L L +GS D+TI +W+L T + + L+ H+D +L D+ L++ S
Sbjct: 300 GHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRKLITGS 359
Query: 293 LDHTIKVW-FATGRGNLEAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP 350
LD TI+VW + TG E T++ + VL++ + V++ D TV ++ +
Sbjct: 360 LDKTIRVWNYITG----ECISTYRGHSDSVLSVDSY-----QKVIVSGSADKTVKVWHVE 410
Query: 351 S 351
S
Sbjct: 411 S 411
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 94/257 (36%), Gaps = 80/257 (31%)
Query: 166 MLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWN-IESSAEFSLDGPVGEVYSMVVA 222
++ +L GH V + R KL +GS D T WN I + G V S+
Sbjct: 334 LIRRLSGHSDGVKTLYFDDR--KLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSY 391
Query: 223 NEMLFAGAQD-----------------GHTRPVTCLAVG-RSRLC-SGSMDNTIRVWELD 263
+++ +G+ D GHT V C+ + +S C S S D TIR+W++
Sbjct: 392 QKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIR 451
Query: 264 T----------------------------------------LEPVMTLN-DHTDAPMSL- 281
T +P MT D +D P +
Sbjct: 452 TNSCLKVFRGHVGQVQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQ 511
Query: 282 -------LCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV 334
+ + LLSC LD+TIK+W + + H E GV + N
Sbjct: 512 ETVLDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVE--GVWDIAADN-----FR 564
Query: 335 LICACNDNTVHLYELPS 351
+I +D ++ +++L S
Sbjct: 565 IISGSHDGSIKVWDLQS 581
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 24/193 (12%)
Query: 216 VYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTI 257
VY + +E + +G +D GHT V CL + +GS D+T+
Sbjct: 243 VYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTV 302
Query: 258 RVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317
RVW+++T E + TL H +A + L + +++CS D +I VW ++ +
Sbjct: 303 RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASATDITL---RRVL 359
Query: 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIG-PDKLFF 376
G A + D D K + + A D T+ ++ S E R + H+ + + D+L
Sbjct: 360 VGHRAAVNVVDFDDKYI-VSASGDRTIKVWS-TSTCEFVRTLNGHKRGIACLQYRDRLVV 417
Query: 377 TGDGAGMLGVWKL 389
+G + +W +
Sbjct: 418 SGSSDNTIRLWDI 430
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 29/229 (12%)
Query: 180 IALPLRSDKLFSGSRDGTAWNIESSAEFSLDGPVGEVY-----SMVVANEMLFAGAQDG- 233
I +R+D L+ G + W+ DGP Y ++ E + + + G
Sbjct: 168 IERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGR 227
Query: 234 -----------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLL 282
+++ V CL ++ SG DN+I++W+ +LE + L HT + + L
Sbjct: 228 HNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQ 287
Query: 283 CWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN 342
++ +++ S D T++VW L H E VL L N +++ D
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNE--AVLHLRFSNG-----LMVTCSKDR 340
Query: 343 TVHLYELPS----FMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVW 387
++ ++++ S + R + + V V++ DK + G + VW
Sbjct: 341 SIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVW 388
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 227 FAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ 286
F +GH R + CL + SGS DNTIR+W+++ + L H + + ++
Sbjct: 395 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 454
Query: 287 FLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV--------LICA 338
++S + D IKVW +L+AA + L L L + G+ +I +
Sbjct: 455 RIVSGAYDGKIKVW------DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISS 508
Query: 339 CNDNTVHLYEL 349
+D+T+ +++
Sbjct: 509 SHDDTILIWDF 519
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 233 GHTRPVTCLAVGRSR--LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSL--LCWDQFL 288
GHT P+ L + + +GS +IRVW+L+ + + TL H SL + F+
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 289 LSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYE 348
S SLD IK+W +G + +H + L PDGK L A +D+TV L++
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS----PDGK-WLASAADDHTVKLWD 175
Query: 349 LPSFMERGRI---FSKHE--VRVIEIGPDK-LFFTGDGAGMLGVWKL 389
L + G++ F+ H V V+E P + L +G + W L
Sbjct: 176 LTA----GKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + +GS D+T+RVW+++T E + TL H +A + L + +++CS
Sbjct: 278 GHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCS 337
Query: 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352
D +I VW ++ + G A + D D K + + A D T+ ++ S
Sbjct: 338 KDRSIAVWDMASATDITL---RRVLVGHRAAVNVVDFDDKYI-VSASGDRTIKVWS-TST 392
Query: 353 MERGRIFSKHEVRVIEIG-PDKLFFTGDGAGMLGVWKL 389
E R + H+ + + D+L +G + +W +
Sbjct: 393 CEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 430
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 29/229 (12%)
Query: 180 IALPLRSDKLFSGSRDGTAWNIESSAEFSLDGPVGEVY-----SMVVANEMLFAGAQDG- 233
I +R+D L+ G + W+ DGP Y ++ E + + + G
Sbjct: 168 IERMVRTDPLWKGLSERRGWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGR 227
Query: 234 -----------HTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLL 282
+++ V CL ++ SG DN+I++W+ +LE + L HT + + L
Sbjct: 228 HNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQ 287
Query: 283 CWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN 342
++ +++ S D T++VW L H E VL L N +++ D
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNE--AVLHLRFSN-----GLMVTCSKDR 340
Query: 343 TVHLYELPS----FMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVW 387
++ ++++ S + R + + V V++ DK + G + VW
Sbjct: 341 SIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVW 388
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 227 FAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ 286
F +GH R + CL + SGS DNTIR+W+++ + L H + + ++
Sbjct: 395 FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNK 454
Query: 287 FLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV--------LICA 338
++S + D IKVW +L+AA + L L L + G+ +I +
Sbjct: 455 RIVSGAYDGKIKVW------DLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISS 508
Query: 339 CNDNTVHLYEL 349
+D+T+ +++
Sbjct: 509 SHDDTILIWDF 519
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%)
Query: 216 VYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275
V+ M A ++ GH V + + S S D TI+VW T E V TLN H
Sbjct: 344 VWDMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHK 403
Query: 276 DAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKE 316
L D+ ++S S D+TI++W L H+E
Sbjct: 404 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEE 444
>sp|A0DB19|LIS11_PARTE Lissencephaly-1 homolog 1 OS=Paramecium tetraurelia
GN=GSPATT00015130001 PE=3 SV=1
Length = 403
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 62/143 (43%), Gaps = 28/143 (19%)
Query: 169 KLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEML 226
KLEGH V+ +A + L S S DG+ W+ ES
Sbjct: 100 KLEGHRAGVNCVAFHPQYQILGSASDDGSIKLWDYESGH--------------------- 138
Query: 227 FAGAQDGHTRPVTCLAVGRS--RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW 284
F GHT V CLA + +CS S D +I++WEL V TL H + ++
Sbjct: 139 FEKTLKGHTSNVNCLAFDPTGKYICSASSDLSIKIWELKNHTCVKTLIGHEHSVSTVQFS 198
Query: 285 DQ--FLLSCSLDHTIKVW-FATG 304
D F+LS S D IK+W ATG
Sbjct: 199 DHGDFILSASRDKNIKLWEVATG 221
>sp|B8NGT5|SCONB_ASPFN Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 /
NRRL 3357 / JCM 12722 / SRRC 167) GN=sconB PE=3 SV=1
Length = 706
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 377 GHTNGVMCLQFEDNILATGSYDATIKIWDTETGEELRTLRGHQSGIRCLQFDDTKLISGS 436
Query: 293 LDHTIKVWFATGRGNLEAAYT-HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP- 350
+D ++KVW G + YT H+ GV+ L +L A D TV ++
Sbjct: 437 MDRSLKVW-NWRTGECISTYTGHR--GGVIGLHF-----DATILASASVDKTVKIWNFED 488
Query: 351 --SFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392
+F+ RG + VRV + F+ + +W L K
Sbjct: 489 KSTFLLRGHTDWVNAVRVDTTS--RTVFSASDDCTVRLWDLDTK 530
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWEL 262
GH+ PVTC+ +G SR +GS D +R++
Sbjct: 675 GHSGPVTCIGLGDSRFATGSEDCEVRMYSF 704
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 39/244 (15%)
Query: 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVG 214
+W GE ++ GH V I L + L S S D T WN E + F L G
Sbjct: 445 NWRTGECISTYT---GHRGGV--IGLHFDATILASASVDKTVKIWNFEDKSTFLLRGHTD 499
Query: 215 EVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDH 274
V ++ V D +R V S S D T+R+W+LDT + T + H
Sbjct: 500 WVNAVRV----------DTTSRTV----------FSASDDCTVRLWDLDTKACLRTFHGH 539
Query: 275 TDAPMSLLC------WDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLND 328
++ ++ C D+ T +L+A + + ++ G +
Sbjct: 540 VGQVQQVVPLPREFEFEDHDAECDNDNMSTTSGDTESNSLQATLGLESNATETSVFGPSF 599
Query: 329 PDGKPV----LICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKL-FFTGDGAGM 383
+G+P ++ + D+T+ L+E + R F H V +G D L +G M
Sbjct: 600 DNGRPAPPRYIVTSALDSTIRLWETTT-GRCLRTFFGHLEGVWALGADTLRIVSGAEDRM 658
Query: 384 LGVW 387
+ +W
Sbjct: 659 VKIW 662
>sp|Q2UFN8|SCONB_ASPOR Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=sconB PE=3 SV=1
Length = 705
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292
GHT V CL + L +GS D TI++W+ +T E + TL H L D L+S S
Sbjct: 376 GHTNGVMCLQFEDNILATGSYDATIKIWDTETGEELRTLRGHQSGIRCLQFDDTKLISGS 435
Query: 293 LDHTIKVWFATGRGNLEAAYT-HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP- 350
+D ++KVW G + YT H+ GV+ L +L A D TV ++
Sbjct: 436 MDRSLKVW-NWRTGECISTYTGHR--GGVIGLHF-----DATILASASVDKTVKIWNFED 487
Query: 351 --SFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392
+F+ RG + VRV + F+ + +W L K
Sbjct: 488 KSTFLLRGHTDWVNAVRVDTTS--RTVFSASDDCTVRLWDLDTK 529
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 233 GHTRPVTCLAVGRSRLCSGSMDNTIRVWEL 262
GH+ PVTC+ +G SR +GS D +R++
Sbjct: 674 GHSGPVTCIGLGDSRFATGSEDCEVRMYSF 703
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 39/244 (15%)
Query: 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVG 214
+W GE ++ GH V I L + L S S D T WN E + F L G
Sbjct: 444 NWRTGECISTYT---GHRGGV--IGLHFDATILASASVDKTVKIWNFEDKSTFLLRGHTD 498
Query: 215 EVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDH 274
V ++ V D +R V S S D T+R+W+LDT + T + H
Sbjct: 499 WVNAVRV----------DTTSRTV----------FSASDDCTVRLWDLDTKACLRTFHGH 538
Query: 275 TDAPMSLLC------WDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLND 328
++ ++ C D+ T +L+A + + ++ G +
Sbjct: 539 VGQVQQVVPLPREFEFEDHDAECDNDNMSTTSGDTESNSLQATLGLESNATETSVFGPSF 598
Query: 329 PDGKPV----LICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKL-FFTGDGAGM 383
+G+P ++ + D+T+ L+E + R F H V +G D L +G M
Sbjct: 599 DNGRPAPPRYIVTSALDSTIRLWETTT-GRCLRTFFGHLEGVWALGADTLRIVSGAEDRM 657
Query: 384 LGVW 387
+ +W
Sbjct: 658 VKIW 661
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,445,998
Number of Sequences: 539616
Number of extensions: 6890098
Number of successful extensions: 23174
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 846
Number of HSP's that attempted gapping in prelim test: 18894
Number of HSP's gapped (non-prelim): 3393
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)