Query 016134
Match_columns 394
No_of_seqs 638 out of 3378
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 08:28:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016134.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016134hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 5.5E-39 1.9E-43 310.3 30.2 264 83-390 119-410 (410)
2 3ow8_A WD repeat-containing pr 100.0 1.5E-38 5.2E-43 297.3 30.3 266 83-390 47-320 (321)
3 4gqb_B Methylosome protein 50; 100.0 1.3E-38 4.3E-43 300.8 28.5 282 77-393 37-333 (344)
4 1got_B GT-beta; complex (GTP-b 100.0 4.2E-36 1.4E-40 282.8 38.1 259 121-388 50-340 (340)
5 2pbi_B Guanine nucleotide-bind 100.0 5.4E-37 1.9E-41 290.6 31.3 270 76-388 70-354 (354)
6 2ynn_A Coatomer subunit beta'; 100.0 2.1E-36 7.1E-41 280.4 30.9 272 75-392 18-303 (304)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-36 6.2E-41 285.9 30.1 281 75-393 21-337 (345)
8 1nr0_A Actin interacting prote 100.0 6.1E-36 2.1E-40 303.6 34.9 307 76-391 65-522 (611)
9 1nr0_A Actin interacting prote 100.0 1.6E-35 5.4E-40 300.5 37.8 292 77-392 25-356 (611)
10 4g56_B MGC81050 protein; prote 100.0 2E-36 6.7E-41 287.2 29.2 284 88-393 20-345 (357)
11 3iz6_a 40S ribosomal protein R 100.0 2.1E-36 7.3E-41 289.2 29.0 281 93-392 45-376 (380)
12 2ynn_A Coatomer subunit beta'; 100.0 3.5E-35 1.2E-39 272.1 32.6 243 121-392 8-260 (304)
13 4ery_A WD repeat-containing pr 100.0 8.6E-35 3E-39 269.8 33.1 272 76-390 29-311 (312)
14 3frx_A Guanine nucleotide-bind 100.0 2E-34 6.8E-39 268.9 35.3 260 121-392 12-318 (319)
15 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-34 4E-39 282.5 34.9 285 83-394 128-445 (445)
16 2xzm_R RACK1; ribosome, transl 100.0 3.3E-35 1.1E-39 276.9 29.8 282 83-392 38-341 (343)
17 2ymu_A WD-40 repeat protein; u 100.0 1.2E-34 4.2E-39 290.8 35.1 278 83-388 273-577 (577)
18 1vyh_C Platelet-activating fac 100.0 1.7E-34 5.9E-39 278.9 33.7 239 122-392 104-370 (410)
19 1erj_A Transcriptional repress 100.0 1.1E-34 3.8E-39 278.5 32.1 283 74-392 68-390 (393)
20 2hes_X YDR267CP; beta-propelle 100.0 6.5E-35 2.2E-39 273.5 28.7 268 86-391 26-328 (330)
21 2ymu_A WD-40 repeat protein; u 100.0 7.7E-34 2.6E-38 285.0 36.9 285 76-390 227-538 (577)
22 4aow_A Guanine nucleotide-bind 100.0 2.5E-33 8.6E-38 261.8 36.3 262 121-394 33-340 (340)
23 2pm9_A Protein WEB1, protein t 100.0 5.3E-35 1.8E-39 281.0 22.2 299 74-393 16-416 (416)
24 1r5m_A SIR4-interacting protei 100.0 4.2E-34 1.4E-38 274.6 28.2 301 74-390 49-424 (425)
25 4gqb_B Methylosome protein 50; 100.0 8.7E-34 3E-38 267.6 26.5 242 125-392 29-290 (344)
26 3ow8_A WD repeat-containing pr 100.0 8.1E-33 2.8E-37 258.4 32.8 240 122-392 28-280 (321)
27 3v7d_B Cell division control p 100.0 2.2E-33 7.4E-38 274.6 29.1 283 83-392 131-422 (464)
28 3dm0_A Maltose-binding peripla 100.0 4.9E-33 1.7E-37 286.2 33.1 268 85-390 396-692 (694)
29 1got_B GT-beta; complex (GTP-b 100.0 6.5E-32 2.2E-36 254.1 35.9 223 165-392 46-302 (340)
30 1gxr_A ESG1, transducin-like e 100.0 9.5E-32 3.2E-36 250.3 34.8 288 76-390 15-336 (337)
31 3vl1_A 26S proteasome regulato 100.0 1.5E-32 5.1E-37 264.6 30.3 293 73-391 59-419 (420)
32 2pbi_B Guanine nucleotide-bind 100.0 3E-32 1E-36 258.0 31.7 246 121-392 59-316 (354)
33 3zwl_B Eukaryotic translation 100.0 2.3E-31 8E-36 250.6 37.6 259 121-391 27-346 (369)
34 2pm7_B Protein transport prote 100.0 3.3E-32 1.1E-36 251.2 29.2 244 121-392 4-286 (297)
35 4ery_A WD repeat-containing pr 100.0 2.3E-31 7.8E-36 246.7 33.5 241 121-392 18-269 (312)
36 3ei3_B DNA damage-binding prot 100.0 4.1E-32 1.4E-36 258.9 27.1 271 75-391 78-382 (383)
37 3k26_A Polycomb protein EED; W 100.0 6.5E-33 2.2E-37 261.2 20.8 270 86-391 36-366 (366)
38 1p22_A F-BOX/WD-repeat protein 100.0 3E-31 1E-35 257.8 31.4 251 124-393 131-416 (435)
39 3iz6_a 40S ribosomal protein R 100.0 8.5E-32 2.9E-36 257.3 27.0 232 155-392 48-330 (380)
40 3odt_A Protein DOA1; ubiquitin 100.0 2.4E-30 8.3E-35 238.5 35.9 257 121-392 13-297 (313)
41 2hes_X YDR267CP; beta-propelle 100.0 6.5E-31 2.2E-35 246.3 30.9 245 121-391 9-280 (330)
42 4g56_B MGC81050 protein; prote 100.0 3.7E-31 1.3E-35 250.9 29.4 232 154-392 27-302 (357)
43 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.3E-31 2.5E-35 247.5 31.3 242 121-391 10-283 (345)
44 2xzm_R RACK1; ribosome, transl 100.0 1.8E-30 6.1E-35 244.5 33.3 239 121-392 16-286 (343)
45 3frx_A Guanine nucleotide-bind 100.0 2.5E-31 8.5E-36 247.9 26.9 252 85-352 31-318 (319)
46 4gga_A P55CDC, cell division c 100.0 6.3E-30 2.2E-34 247.4 37.7 248 130-391 109-395 (420)
47 3bg1_A Protein SEC13 homolog; 100.0 4.5E-32 1.5E-36 252.7 21.6 243 121-392 8-294 (316)
48 1pgu_A Actin interacting prote 100.0 6.1E-31 2.1E-35 265.2 31.5 293 72-389 20-364 (615)
49 1sq9_A Antiviral protein SKI8; 100.0 1.1E-30 3.8E-35 249.5 31.2 259 121-392 11-396 (397)
50 4ggc_A P55CDC, cell division c 100.0 7.1E-30 2.4E-34 236.1 35.6 248 132-392 31-316 (318)
51 4a11_B DNA excision repair pro 100.0 4.1E-31 1.4E-35 252.6 27.9 284 91-392 20-366 (408)
52 4e54_B DNA damage-binding prot 100.0 3E-32 1E-36 265.0 20.3 270 84-393 132-432 (435)
53 1k8k_C P40, ARP2/3 complex 41 100.0 6.5E-31 2.2E-35 248.5 28.7 256 125-391 7-361 (372)
54 3dwl_C Actin-related protein 2 100.0 5E-32 1.7E-36 257.4 21.1 272 73-389 14-377 (377)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.7E-30 1.9E-34 249.3 35.5 254 122-392 114-392 (445)
56 1erj_A Transcriptional repress 100.0 4E-30 1.4E-34 246.7 32.7 235 124-392 62-342 (393)
57 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-30 6.3E-35 283.0 33.8 293 75-392 620-1075(1249)
58 4aez_A CDC20, WD repeat-contai 100.0 1.1E-29 3.9E-34 244.0 35.5 244 139-393 103-382 (401)
59 3gre_A Serine/threonine-protei 100.0 2.8E-31 9.7E-36 257.5 22.5 255 121-392 58-360 (437)
60 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-30 5.6E-35 249.8 25.9 271 86-392 49-343 (402)
61 4h5i_A Guanine nucleotide-exch 100.0 2.2E-30 7.4E-35 246.3 26.1 282 76-392 20-344 (365)
62 2pm9_A Protein WEB1, protein t 100.0 2.7E-30 9.2E-35 248.2 26.2 258 128-392 14-338 (416)
63 1r5m_A SIR4-interacting protei 100.0 1.3E-29 4.4E-34 243.3 30.2 257 124-391 43-361 (425)
64 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-30 5.2E-35 258.3 24.2 250 126-391 133-428 (524)
65 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-31 5.8E-36 265.1 17.4 271 83-392 172-518 (524)
66 3i2n_A WD repeat-containing pr 100.0 1.8E-29 6.1E-34 237.0 29.9 264 122-392 14-354 (357)
67 1pgu_A Actin interacting prote 100.0 8E-30 2.7E-34 257.0 29.2 285 83-392 171-573 (615)
68 4aow_A Guanine nucleotide-bind 100.0 8.3E-29 2.8E-33 231.1 33.4 224 164-392 28-287 (340)
69 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-29 8.6E-34 234.0 29.6 252 121-393 6-339 (351)
70 3gre_A Serine/threonine-protei 100.0 1.8E-30 6E-35 251.9 22.2 266 83-388 75-437 (437)
71 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-30 1.6E-34 270.7 26.9 294 75-392 22-520 (902)
72 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-29 4.8E-34 267.1 30.3 301 76-392 104-606 (902)
73 1p22_A F-BOX/WD-repeat protein 100.0 5.4E-30 1.8E-34 248.9 25.0 260 83-371 142-434 (435)
74 1gxr_A ESG1, transducin-like e 100.0 4.1E-29 1.4E-33 232.5 29.9 253 127-392 10-297 (337)
75 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-29 8.1E-34 262.4 31.4 293 74-391 17-386 (814)
76 3jrp_A Fusion protein of prote 100.0 1.9E-29 6.5E-34 238.6 27.9 242 121-391 6-287 (379)
77 3sfz_A APAF-1, apoptotic pepti 100.0 5.5E-31 1.9E-35 287.2 18.7 244 135-390 969-1248(1249)
78 3dm0_A Maltose-binding peripla 100.0 3.9E-29 1.3E-33 257.2 31.3 241 121-392 377-633 (694)
79 2pm7_B Protein transport prote 100.0 7.5E-30 2.6E-34 235.4 22.9 249 76-351 15-285 (297)
80 3vl1_A 26S proteasome regulato 100.0 2.7E-29 9.4E-34 241.8 27.1 254 129-392 59-366 (420)
81 3dw8_B Serine/threonine-protei 100.0 1.2E-28 4E-33 239.2 29.2 258 124-390 26-445 (447)
82 3dwl_C Actin-related protein 2 100.0 8.2E-30 2.8E-34 242.1 20.5 230 127-390 12-280 (377)
83 3v7d_B Cell division control p 100.0 8.7E-28 3E-32 234.7 33.3 235 122-392 117-382 (464)
84 1yfq_A Cell cycle arrest prote 100.0 1.6E-28 5.6E-33 229.4 26.9 240 122-392 7-283 (342)
85 3mkq_A Coatomer beta'-subunit; 100.0 6.3E-28 2.2E-32 251.6 34.2 260 122-392 9-303 (814)
86 4gga_A P55CDC, cell division c 100.0 1.8E-28 6E-33 237.2 27.6 257 74-358 109-402 (420)
87 3mmy_A MRNA export factor; mRN 100.0 8.2E-28 2.8E-32 226.2 30.4 261 121-389 34-344 (368)
88 3ei3_B DNA damage-binding prot 100.0 3.1E-28 1.1E-32 232.0 27.5 239 121-392 68-340 (383)
89 3odt_A Protein DOA1; ubiquitin 100.0 2.7E-27 9.1E-32 218.0 33.0 223 159-392 3-256 (313)
90 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-28 5.3E-33 231.1 24.3 256 83-388 47-330 (343)
91 3bg1_A Protein SEC13 homolog; 100.0 1.7E-29 6E-34 235.1 16.5 251 76-351 19-293 (316)
92 2w18_A PALB2, fancn, partner a 100.0 1.6E-27 5.4E-32 219.8 27.2 234 154-390 64-356 (356)
93 1yfq_A Cell cycle arrest prote 100.0 6.3E-28 2.2E-32 225.4 23.7 264 74-383 15-315 (342)
94 4e54_B DNA damage-binding prot 100.0 4.6E-28 1.6E-32 235.4 23.2 242 123-392 116-388 (435)
95 2xyi_A Probable histone-bindin 100.0 1.3E-27 4.5E-32 231.9 26.2 247 122-391 124-410 (430)
96 4aez_A CDC20, WD repeat-contai 100.0 3.7E-27 1.3E-31 226.4 28.3 251 84-359 103-388 (401)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 2.6E-27 8.8E-32 227.4 27.1 226 150-393 54-301 (402)
98 1sq9_A Antiviral protein SKI8; 100.0 3.7E-28 1.3E-32 231.9 20.7 251 85-352 27-396 (397)
99 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.8E-27 9.5E-32 230.9 26.8 243 124-392 100-392 (450)
100 4h5i_A Guanine nucleotide-exch 100.0 2.2E-27 7.6E-32 225.5 25.4 237 84-352 94-344 (365)
101 3k26_A Polycomb protein EED; W 100.0 9.2E-28 3.1E-32 225.9 22.6 237 122-392 14-319 (366)
102 3zwl_B Eukaryotic translation 100.0 8.5E-27 2.9E-31 219.3 28.7 252 76-354 38-349 (369)
103 3jro_A Fusion protein of prote 100.0 1E-27 3.5E-32 248.8 24.4 243 121-392 4-286 (753)
104 4ggc_A P55CDC, cell division c 100.0 1.2E-26 4.1E-31 214.3 28.6 252 74-353 29-317 (318)
105 3i2n_A WD repeat-containing pr 100.0 5.8E-28 2E-32 226.7 19.0 252 83-354 29-356 (357)
106 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-27 8.6E-32 231.7 23.3 259 69-390 14-296 (588)
107 4gq1_A NUP37; propeller, trans 100.0 5.8E-28 2E-32 231.8 17.9 228 135-389 97-387 (393)
108 4a11_B DNA excision repair pro 100.0 1.1E-26 3.8E-31 221.8 26.2 295 83-391 55-405 (408)
109 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-27 6.4E-32 221.3 19.2 255 76-358 17-344 (351)
110 1k8k_C P40, ARP2/3 complex 41 100.0 5.5E-26 1.9E-30 214.6 29.0 216 170-391 4-274 (372)
111 3vu4_A KMHSV2; beta-propeller 100.0 9.3E-26 3.2E-30 213.4 29.6 257 122-392 15-337 (355)
112 3jrp_A Fusion protein of prote 99.9 9.9E-26 3.4E-30 213.0 26.8 206 165-392 2-241 (379)
113 3mmy_A MRNA export factor; mRN 99.9 3.7E-25 1.3E-29 208.0 30.3 228 164-392 29-305 (368)
114 1l0q_A Surface layer protein; 99.9 7.2E-25 2.5E-29 208.9 32.4 258 86-392 4-276 (391)
115 3bws_A Protein LP49; two-domai 99.9 6.4E-25 2.2E-29 212.2 30.5 273 75-391 127-432 (433)
116 3dw8_B Serine/threonine-protei 99.9 1.1E-25 3.6E-30 218.3 24.7 216 172-392 26-374 (447)
117 3vu4_A KMHSV2; beta-propeller 99.9 2.9E-25 1E-29 210.0 25.3 225 157-392 3-272 (355)
118 3lrv_A PRE-mRNA-splicing facto 99.9 2.7E-25 9.3E-30 208.9 23.5 231 135-392 44-293 (343)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.7E-25 2.6E-29 213.5 27.4 231 128-389 6-337 (450)
120 4gq1_A NUP37; propeller, trans 99.9 2.3E-26 7.8E-31 220.6 13.4 249 83-351 100-389 (393)
121 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-24 5.3E-29 212.1 25.3 223 124-380 83-350 (588)
122 2w18_A PALB2, fancn, partner a 99.9 4.9E-24 1.7E-28 196.6 23.5 243 92-349 61-355 (356)
123 2xyi_A Probable histone-bindin 99.9 3.7E-24 1.3E-28 207.6 21.5 240 84-352 141-411 (430)
124 3jro_A Fusion protein of prote 99.9 1.2E-23 4.1E-28 218.2 25.3 202 167-392 2-239 (753)
125 3bws_A Protein LP49; two-domai 99.9 8.7E-23 3E-27 197.2 26.7 260 89-392 94-391 (433)
126 1l0q_A Surface layer protein; 99.9 2.3E-21 7.9E-26 184.6 32.4 214 149-392 8-234 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.7E-22 1.9E-26 191.5 24.0 255 95-392 94-388 (415)
128 1nir_A Nitrite reductase; hemo 99.9 5.6E-21 1.9E-25 190.6 30.3 285 83-392 148-515 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.2E-19 1.1E-23 172.1 24.7 242 84-373 143-409 (415)
130 1ri6_A Putative isomerase YBHE 99.8 3.5E-19 1.2E-23 165.7 24.0 268 88-390 9-307 (343)
131 1nir_A Nitrite reductase; hemo 99.8 1.3E-18 4.6E-23 173.4 27.1 248 135-392 145-459 (543)
132 2ecf_A Dipeptidyl peptidase IV 99.8 2.1E-19 7.3E-24 185.6 21.3 306 74-390 40-458 (741)
133 3u4y_A Uncharacterized protein 99.8 2.1E-18 7.1E-23 160.3 25.4 263 86-392 12-305 (331)
134 1xfd_A DIP, dipeptidyl aminope 99.8 7.8E-19 2.7E-23 180.8 24.3 301 72-392 18-394 (723)
135 2ojh_A Uncharacterized protein 99.8 3.8E-19 1.3E-23 161.3 19.0 247 88-382 16-293 (297)
136 1pby_B Quinohemoprotein amine 99.8 1.5E-18 5.2E-23 161.0 22.6 260 86-392 3-311 (337)
137 3vgz_A Uncharacterized protein 99.8 1.1E-16 3.7E-21 149.6 29.4 248 128-392 42-304 (353)
138 3vgz_A Uncharacterized protein 99.8 5.6E-17 1.9E-21 151.6 26.6 244 93-381 68-334 (353)
139 2oit_A Nucleoporin 214KDA; NH2 99.8 6.6E-18 2.3E-22 163.9 18.9 218 154-392 24-279 (434)
140 2z3z_A Dipeptidyl aminopeptida 99.8 1.4E-17 4.8E-22 171.1 22.1 270 76-392 87-436 (706)
141 3u4y_A Uncharacterized protein 99.8 1.1E-16 3.9E-21 148.5 26.1 214 152-392 19-253 (331)
142 2ecf_A Dipeptidyl peptidase IV 99.8 6.4E-17 2.2E-21 167.0 25.2 259 128-391 38-413 (741)
143 2ojh_A Uncharacterized protein 99.8 1E-16 3.4E-21 145.3 22.7 215 149-392 18-259 (297)
144 3hfq_A Uncharacterized protein 99.8 4E-16 1.4E-20 146.1 27.0 277 91-391 13-317 (347)
145 3o4h_A Acylamino-acid-releasin 99.7 3.6E-17 1.2E-21 164.5 17.7 258 83-390 32-314 (582)
146 2z3z_A Dipeptidyl aminopeptida 99.7 6.3E-17 2.2E-21 166.2 19.9 309 66-391 20-391 (706)
147 1ri6_A Putative isomerase YBHE 99.7 4.1E-16 1.4E-20 144.8 23.6 216 151-390 13-261 (343)
148 1xfd_A DIP, dipeptidyl aminope 99.7 1.6E-16 5.5E-21 163.5 21.7 232 129-388 19-341 (723)
149 1k32_A Tricorn protease; prote 99.7 3.9E-16 1.3E-20 167.5 25.0 297 77-393 251-639 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.7 7.3E-16 2.5E-20 143.6 23.4 230 135-392 7-326 (349)
151 2oit_A Nucleoporin 214KDA; NH2 99.7 2E-16 6.8E-21 153.4 19.5 207 129-352 39-279 (434)
152 1k32_A Tricorn protease; prote 99.7 4.3E-16 1.5E-20 167.1 23.6 255 86-390 216-501 (1045)
153 3scy_A Hypothetical bacterial 99.7 1.3E-13 4.3E-18 129.8 33.8 250 139-391 13-337 (361)
154 1pby_B Quinohemoprotein amine 99.7 1.5E-14 5.1E-19 133.8 23.1 214 151-392 9-270 (337)
155 3o4h_A Acylamino-acid-releasin 99.7 2.4E-15 8.3E-20 151.0 18.6 224 128-389 23-274 (582)
156 3hfq_A Uncharacterized protein 99.6 2.1E-14 7.2E-19 134.3 22.9 227 145-391 8-271 (347)
157 1z68_A Fibroblast activation p 99.6 9.1E-16 3.1E-20 157.9 14.4 295 74-391 19-391 (719)
158 1jmx_B Amine dehydrogenase; ox 99.6 3.4E-14 1.2E-18 132.2 20.4 232 83-360 10-334 (349)
159 3pe7_A Oligogalacturonate lyas 99.6 9.1E-14 3.1E-18 131.7 19.9 273 76-391 41-382 (388)
160 1q7f_A NHL, brain tumor CG1071 99.6 6.9E-12 2.3E-16 113.8 31.0 234 124-392 27-281 (286)
161 1jof_A Carboxy-CIS,CIS-muconat 99.6 7.3E-13 2.5E-17 125.1 23.9 239 128-391 41-341 (365)
162 3fvz_A Peptidyl-glycine alpha- 99.6 2.4E-12 8.1E-17 119.9 26.1 222 153-392 69-323 (329)
163 4a5s_A Dipeptidyl peptidase 4 99.5 2E-13 7E-18 141.1 20.3 297 73-390 19-397 (740)
164 3scy_A Hypothetical bacterial 99.5 3.7E-12 1.3E-16 119.6 27.1 261 91-370 24-360 (361)
165 1z68_A Fibroblast activation p 99.5 3.4E-14 1.2E-18 146.2 11.4 227 135-391 23-346 (719)
166 4a5s_A Dipeptidyl peptidase 4 99.5 3.3E-13 1.1E-17 139.5 18.6 230 131-392 21-354 (740)
167 2oiz_A Aromatic amine dehydrog 99.5 3.7E-12 1.3E-16 120.3 23.5 220 148-392 26-335 (361)
168 1jof_A Carboxy-CIS,CIS-muconat 99.5 1E-11 3.6E-16 117.1 24.2 213 154-390 15-290 (365)
169 3c5m_A Oligogalacturonate lyas 99.5 4.8E-13 1.6E-17 126.8 14.7 268 74-390 39-381 (396)
170 3azo_A Aminopeptidase; POP fam 99.5 2.5E-12 8.6E-17 130.9 20.7 225 136-389 87-365 (662)
171 2oiz_A Aromatic amine dehydrog 99.4 6.7E-11 2.3E-15 111.6 26.6 257 91-373 28-359 (361)
172 2gop_A Trilobed protease; beta 99.4 9.8E-12 3.3E-16 115.9 20.3 243 92-390 41-330 (347)
173 2xdw_A Prolyl endopeptidase; a 99.4 1.3E-10 4.5E-15 119.4 30.4 248 122-392 120-415 (710)
174 2dg1_A DRP35, lactonase; beta 99.4 2.2E-10 7.4E-15 106.2 28.4 254 83-381 16-300 (333)
175 3azo_A Aminopeptidase; POP fam 99.4 2.4E-11 8.2E-16 123.6 19.5 240 124-390 21-322 (662)
176 3pe7_A Oligogalacturonate lyas 99.3 1.9E-10 6.6E-15 108.6 23.3 207 158-392 15-274 (388)
177 1rwi_B Serine/threonine-protei 99.3 2E-10 6.9E-15 102.9 22.2 231 130-393 27-266 (270)
178 3e5z_A Putative gluconolactona 99.3 9.3E-10 3.2E-14 100.3 26.6 227 128-390 29-285 (296)
179 3dsm_A Uncharacterized protein 99.3 1.9E-10 6.5E-15 106.9 22.2 263 90-390 13-301 (328)
180 3no2_A Uncharacterized protein 99.3 1.3E-09 4.4E-14 98.8 27.2 197 149-378 11-230 (276)
181 3c5m_A Oligogalacturonate lyas 99.3 4.3E-11 1.5E-15 113.2 17.9 248 129-392 38-330 (396)
182 2dg1_A DRP35, lactonase; beta 99.3 2.1E-09 7.1E-14 99.5 28.8 227 129-390 8-262 (333)
183 2bkl_A Prolyl endopeptidase; m 99.3 9.6E-11 3.3E-15 120.2 21.5 243 122-392 116-398 (695)
184 2bkl_A Prolyl endopeptidase; m 99.3 1.2E-10 4.1E-15 119.5 21.9 241 74-354 124-400 (695)
185 1q7f_A NHL, brain tumor CG1071 99.3 2.5E-09 8.5E-14 96.8 27.9 198 171-390 26-237 (286)
186 3dsm_A Uncharacterized protein 99.3 1.9E-09 6.6E-14 100.1 27.5 214 147-392 11-254 (328)
187 1xip_A Nucleoporin NUP159; bet 99.3 1.2E-10 4.2E-15 110.0 18.6 178 176-377 39-230 (388)
188 2gop_A Trilobed protease; beta 99.3 4E-10 1.4E-14 104.9 21.5 214 152-390 42-290 (347)
189 3fvz_A Peptidyl-glycine alpha- 99.3 9.4E-10 3.2E-14 102.1 24.0 197 174-392 23-278 (329)
190 1qks_A Cytochrome CD1 nitrite 99.3 7.8E-09 2.7E-13 103.0 30.6 282 85-392 168-539 (567)
191 2mad_H Methylamine dehydrogena 99.2 1.9E-08 6.5E-13 95.2 30.5 256 95-392 48-351 (373)
192 1qks_A Cytochrome CD1 nitrite 99.2 1E-08 3.4E-13 102.2 28.8 214 151-391 175-421 (567)
193 3no2_A Uncharacterized protein 99.2 2E-09 6.7E-14 97.6 20.8 240 83-360 4-261 (276)
194 2z2n_A Virginiamycin B lyase; 99.2 2.1E-07 7.1E-12 84.0 34.0 249 128-392 16-296 (299)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 2.7E-08 9.2E-13 90.9 27.7 241 129-392 20-300 (314)
196 1yr2_A Prolyl oligopeptidase; 99.2 2.8E-09 9.5E-14 110.1 23.3 244 123-392 159-442 (741)
197 3e5z_A Putative gluconolactona 99.1 1.7E-08 5.7E-13 91.9 22.2 193 167-390 20-245 (296)
198 2xdw_A Prolyl endopeptidase; a 99.1 7.1E-09 2.4E-13 106.5 21.0 228 136-389 80-366 (710)
199 1yr2_A Prolyl oligopeptidase; 99.1 8.5E-09 2.9E-13 106.4 20.6 238 75-353 167-443 (741)
200 3sjl_D Methylamine dehydrogena 99.0 1.2E-07 4E-12 89.3 24.4 251 135-392 40-364 (386)
201 2z2n_A Virginiamycin B lyase; 99.0 2.3E-06 7.7E-11 77.1 32.2 211 170-389 10-253 (299)
202 1rwi_B Serine/threonine-protei 99.0 1.2E-07 4E-12 84.7 21.7 189 176-392 25-223 (270)
203 2qc5_A Streptogramin B lactona 99.0 2.3E-06 7.8E-11 77.1 30.4 228 128-389 21-258 (300)
204 3hrp_A Uncharacterized protein 99.0 4.8E-07 1.6E-11 86.6 27.0 233 128-389 132-408 (409)
205 2qc5_A Streptogramin B lactona 98.9 7.9E-07 2.7E-11 80.2 26.8 254 89-389 36-298 (300)
206 1xip_A Nucleoporin NUP159; bet 98.9 6.6E-09 2.3E-13 98.2 12.8 140 237-391 39-191 (388)
207 3q7m_A Lipoprotein YFGL, BAMB; 98.9 2.5E-07 8.6E-12 87.1 23.8 226 151-388 111-375 (376)
208 3iuj_A Prolyl endopeptidase; h 98.9 3.3E-07 1.1E-11 93.8 25.0 241 122-392 124-406 (693)
209 2iwa_A Glutamine cyclotransfer 98.9 2.5E-06 8.4E-11 76.2 26.8 203 165-392 10-238 (266)
210 3g4e_A Regucalcin; six bladed 98.9 9.5E-07 3.2E-11 80.4 24.5 205 152-380 34-262 (297)
211 3c75_H MADH, methylamine dehyd 98.9 7.4E-07 2.5E-11 85.2 24.4 233 153-392 99-403 (426)
212 3dr2_A Exported gluconolactona 98.8 8.1E-07 2.8E-11 81.2 21.7 219 129-383 47-299 (305)
213 3iuj_A Prolyl endopeptidase; h 98.8 6.4E-07 2.2E-11 91.7 22.9 233 77-354 135-408 (693)
214 3hrp_A Uncharacterized protein 98.8 5.1E-06 1.7E-10 79.4 26.6 189 175-390 131-353 (409)
215 1yiq_A Quinohemoprotein alcoho 98.8 7.9E-07 2.7E-11 90.8 21.9 81 294-380 454-538 (689)
216 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 2E-06 6.9E-11 78.2 22.3 196 171-390 14-255 (314)
217 1kb0_A Quinohemoprotein alcoho 98.7 2.7E-06 9.1E-11 86.7 24.1 280 83-390 127-566 (677)
218 3q7m_A Lipoprotein YFGL, BAMB; 98.7 6.8E-06 2.3E-10 77.2 25.4 229 152-392 62-338 (376)
219 1mda_H Methylamine dehydrogena 98.7 5.9E-07 2E-11 84.4 17.3 228 154-392 47-347 (368)
220 2ghs_A AGR_C_1268P; regucalcin 98.7 1.5E-05 5.1E-10 73.6 26.6 202 153-381 71-293 (326)
221 2mad_H Methylamine dehydrogena 98.7 3.3E-05 1.1E-09 72.7 29.2 217 154-392 48-308 (373)
222 2hz6_A Endoplasmic reticulum t 98.7 8.2E-09 2.8E-13 97.5 4.1 193 150-373 16-215 (369)
223 3sjl_D Methylamine dehydrogena 98.7 2.8E-06 9.7E-11 79.9 21.1 259 93-372 58-384 (386)
224 3nol_A Glutamine cyclotransfer 98.6 1E-05 3.5E-10 71.5 22.4 187 165-378 32-243 (262)
225 2qe8_A Uncharacterized protein 98.6 1.9E-06 6.6E-11 80.1 18.9 229 128-382 18-312 (343)
226 3g4e_A Regucalcin; six bladed 98.6 6E-05 2.1E-09 68.3 28.3 193 170-391 8-229 (297)
227 2qe8_A Uncharacterized protein 98.6 1E-05 3.5E-10 75.1 22.8 206 165-389 10-276 (343)
228 1yiq_A Quinohemoprotein alcoho 98.6 4.2E-06 1.5E-10 85.4 21.6 152 241-393 240-507 (689)
229 3hxj_A Pyrrolo-quinoline quino 98.6 8.3E-06 2.8E-10 74.7 20.5 207 151-393 115-326 (330)
230 3mbr_X Glutamine cyclotransfer 98.6 3.3E-05 1.1E-09 67.6 22.9 187 165-378 10-222 (243)
231 3nok_A Glutaminyl cyclase; bet 98.5 2.6E-05 8.8E-10 69.0 21.8 186 165-378 44-253 (268)
232 2hz6_A Endoplasmic reticulum t 98.5 2.8E-08 9.5E-13 93.9 2.1 141 243-392 7-150 (369)
233 2ghs_A AGR_C_1268P; regucalcin 98.5 0.00014 4.6E-09 67.0 26.7 186 176-390 50-259 (326)
234 1kb0_A Quinohemoprotein alcoho 98.4 2.2E-05 7.5E-10 80.0 21.0 137 256-393 284-509 (677)
235 1mda_H Methylamine dehydrogena 98.4 1.5E-05 5E-10 74.9 17.9 254 95-372 47-367 (368)
236 3hxj_A Pyrrolo-quinoline quino 98.4 3E-05 1E-09 70.9 19.5 139 240-389 141-282 (330)
237 3c75_H MADH, methylamine dehyd 98.3 9.6E-05 3.3E-09 70.6 21.2 244 94-358 99-409 (426)
238 2ece_A 462AA long hypothetical 98.3 0.00074 2.5E-08 64.3 26.8 137 255-391 164-352 (462)
239 4a2l_A BT_4663, two-component 98.3 0.0022 7.4E-08 66.5 32.6 227 155-390 237-525 (795)
240 2ece_A 462AA long hypothetical 98.3 0.00043 1.5E-08 65.9 24.4 208 151-379 104-399 (462)
241 1kv9_A Type II quinohemoprotei 98.2 0.00021 7.3E-09 72.6 22.3 80 294-379 437-520 (668)
242 3dr2_A Exported gluconolactona 98.2 0.0001 3.4E-09 67.1 17.6 148 236-391 45-224 (305)
243 3nok_A Glutaminyl cyclase; bet 98.1 0.00018 6E-09 63.6 17.7 147 236-392 55-211 (268)
244 1npe_A Nidogen, entactin; glyc 98.1 0.0042 1.4E-07 54.9 28.0 212 154-391 11-238 (267)
245 4a2l_A BT_4663, two-component 98.1 0.004 1.4E-07 64.5 29.9 232 154-391 194-480 (795)
246 2iwa_A Glutamine cyclotransfer 98.1 0.00079 2.7E-08 59.9 20.9 148 237-392 22-182 (266)
247 1fwx_A Nitrous oxide reductase 98.1 0.00023 7.9E-09 70.1 18.8 197 184-391 99-361 (595)
248 3nol_A Glutamine cyclotransfer 98.0 0.00065 2.2E-08 59.9 18.0 147 237-392 44-202 (262)
249 2xe4_A Oligopeptidase B; hydro 98.0 0.0014 4.8E-08 67.5 23.4 196 128-349 175-398 (751)
250 1kv9_A Type II quinohemoprotei 97.9 0.0013 4.5E-08 66.7 21.7 152 241-393 235-490 (668)
251 3mbr_X Glutamine cyclotransfer 97.9 0.0029 1E-07 55.2 20.7 149 235-392 20-180 (243)
252 1npe_A Nidogen, entactin; glyc 97.9 0.013 4.3E-07 51.7 25.1 191 153-373 58-262 (267)
253 1fwx_A Nitrous oxide reductase 97.8 0.0027 9.4E-08 62.5 21.6 232 136-379 98-406 (595)
254 1w6s_A Methanol dehydrogenase 97.8 0.0063 2.1E-07 60.7 24.7 80 293-379 451-535 (599)
255 1flg_A Protein (quinoprotein e 97.8 0.0094 3.2E-07 59.4 25.1 80 294-380 465-549 (582)
256 3v9f_A Two-component system se 97.8 0.038 1.3E-06 56.9 30.6 211 174-391 312-568 (781)
257 2ad6_A Methanol dehydrogenase 97.8 0.0039 1.3E-07 62.0 22.1 81 294-380 443-527 (571)
258 2ad6_A Methanol dehydrogenase 97.7 0.0054 1.8E-07 61.0 22.1 138 255-393 272-496 (571)
259 3v9f_A Two-component system se 97.7 0.025 8.5E-07 58.3 27.5 230 155-391 232-524 (781)
260 1w6s_A Methanol dehydrogenase 97.7 0.018 6.2E-07 57.4 25.2 138 255-393 278-505 (599)
261 1k3i_A Galactose oxidase precu 97.6 0.0078 2.7E-07 60.8 21.3 215 154-391 220-497 (656)
262 1k3i_A Galactose oxidase precu 97.5 0.0036 1.2E-07 63.3 18.5 215 154-380 266-530 (656)
263 2p4o_A Hypothetical protein; p 97.5 0.049 1.7E-06 49.1 25.4 215 130-379 35-276 (306)
264 2fp8_A Strictosidine synthase; 97.5 0.054 1.8E-06 49.1 24.3 129 255-392 165-314 (322)
265 2fp8_A Strictosidine synthase; 97.4 0.012 4.2E-07 53.5 18.4 151 238-391 21-216 (322)
266 2xe4_A Oligopeptidase B; hydro 97.4 0.023 7.9E-07 58.4 22.2 239 76-353 179-460 (751)
267 3v65_B Low-density lipoprotein 97.3 0.1 3.6E-06 48.8 26.9 209 154-389 97-316 (386)
268 3v64_C Agrin; beta propeller, 97.3 0.08 2.7E-06 48.9 23.3 151 237-391 74-234 (349)
269 3v65_B Low-density lipoprotein 97.2 0.11 3.7E-06 48.7 23.6 151 237-391 117-277 (386)
270 2vpj_A Kelch-like protein 12; 97.2 0.046 1.6E-06 49.0 20.1 141 244-391 112-278 (301)
271 3amr_A 3-phytase; beta-propell 97.2 0.05 1.7E-06 50.0 19.5 141 246-389 41-208 (355)
272 2p4o_A Hypothetical protein; p 97.2 0.13 4.3E-06 46.3 25.7 199 165-390 23-241 (306)
273 3sov_A LRP-6, low-density lipo 97.1 0.15 5E-06 46.5 26.0 214 154-391 14-238 (318)
274 2xn4_A Kelch-like protein 2; s 97.0 0.088 3E-06 47.1 19.8 213 153-392 30-277 (302)
275 3v64_C Agrin; beta propeller, 96.9 0.25 8.5E-06 45.5 28.7 209 154-389 54-273 (349)
276 1ijq_A LDL receptor, low-densi 96.8 0.28 9.5E-06 44.4 24.8 151 236-391 30-195 (316)
277 3tc9_A Hypothetical hydrolase; 96.8 0.12 4.2E-06 49.1 19.7 146 237-390 138-300 (430)
278 2p9w_A MAL S 1 allergenic prot 96.8 0.16 5.4E-06 46.2 18.8 151 239-391 16-215 (334)
279 3tc9_A Hypothetical hydrolase; 96.7 0.44 1.5E-05 45.2 24.6 214 153-390 159-429 (430)
280 2vpj_A Kelch-like protein 12; 96.7 0.15 5.1E-06 45.5 18.5 189 139-353 64-280 (301)
281 3qqz_A Putative uncharacterize 96.7 0.29 9.9E-06 42.9 26.1 195 168-388 20-250 (255)
282 1flg_A Protein (quinoprotein e 96.7 0.07 2.4E-06 53.0 17.5 139 255-393 291-518 (582)
283 4asc_A Kelch repeat and BTB do 96.7 0.28 9.7E-06 44.1 20.4 176 154-353 14-223 (315)
284 3p5b_L Low density lipoprotein 96.7 0.29 1E-05 45.9 21.0 152 236-391 112-277 (400)
285 1zgk_A Kelch-like ECH-associat 96.6 0.13 4.4E-06 46.2 17.6 144 243-392 120-288 (308)
286 2xbg_A YCF48-like protein; pho 96.6 0.41 1.4E-05 43.5 22.1 187 173-388 120-319 (327)
287 3p5b_L Low density lipoprotein 96.6 0.5 1.7E-05 44.4 29.3 214 154-390 93-319 (400)
288 3m0c_C LDL receptor, low-densi 96.5 0.63 2.1E-05 47.9 23.9 153 235-391 423-589 (791)
289 3ei3_A DNA damage-binding prot 96.4 1 3.4E-05 48.5 25.4 140 246-392 845-1000(1158)
290 1ijq_A LDL receptor, low-densi 96.4 0.53 1.8E-05 42.5 29.3 210 154-390 11-237 (316)
291 2xn4_A Kelch-like protein 2; s 96.4 0.21 7.1E-06 44.6 17.4 189 139-353 63-278 (302)
292 3ii7_A Kelch-like protein 7; p 96.3 0.32 1.1E-05 43.5 18.4 143 243-392 100-273 (306)
293 2rhk_C Cleavage and polyadenyl 96.3 0.00066 2.3E-08 47.2 0.0 30 33-62 12-42 (72)
294 2d9n_A Cleavage and polyadenyl 96.2 0.001 3.6E-08 46.9 0.8 31 32-62 5-36 (77)
295 3sov_A LRP-6, low-density lipo 96.1 0.63 2.2E-05 42.1 19.2 150 238-391 37-197 (318)
296 4hw6_A Hypothetical protein, I 96.1 0.98 3.4E-05 42.8 27.2 212 176-390 140-432 (433)
297 1n7d_A LDL receptor, low-densi 96.1 0.052 1.8E-06 55.2 12.8 140 245-390 465-613 (699)
298 4hw6_A Hypothetical protein, I 96.0 0.47 1.6E-05 45.1 18.5 147 236-390 139-303 (433)
299 3amr_A 3-phytase; beta-propell 95.9 0.99 3.4E-05 41.4 22.0 217 153-389 50-327 (355)
300 3s94_A LRP-6, low-density lipo 95.8 1.7 5.7E-05 43.4 24.8 212 154-391 19-243 (619)
301 2woz_A Kelch repeat and BTB do 95.8 1 3.6E-05 40.3 20.0 105 244-353 109-233 (318)
302 3ii7_A Kelch-like protein 7; p 95.7 0.9 3.1E-05 40.4 18.5 187 140-353 58-274 (306)
303 3m0c_C LDL receptor, low-densi 95.7 2.3 7.9E-05 43.7 28.5 148 239-390 474-631 (791)
304 3kya_A Putative phosphatase; s 95.7 0.7 2.4E-05 44.6 18.0 149 237-390 140-340 (496)
305 4a0p_A LRP6, LRP-6, low-densit 95.6 1.5 5.2E-05 43.8 21.1 152 236-391 37-197 (628)
306 1zgk_A Kelch-like ECH-associat 95.6 0.59 2E-05 41.8 16.7 175 153-353 90-289 (308)
307 4a0p_A LRP6, LRP-6, low-densit 95.3 2.6 9.1E-05 42.0 29.3 212 154-391 16-237 (628)
308 3qqz_A Putative uncharacterize 95.3 1.4 4.7E-05 38.5 19.1 155 233-391 24-204 (255)
309 3ei3_A DNA damage-binding prot 95.1 4.6 0.00016 43.4 29.7 143 245-390 483-635 (1158)
310 2xbg_A YCF48-like protein; pho 94.8 2.2 7.5E-05 38.5 28.8 204 173-384 34-272 (327)
311 2xzh_A Clathrin heavy chain 1; 94.7 2.5 8.5E-05 38.4 19.5 117 81-217 74-203 (365)
312 1n7d_A LDL receptor, low-densi 94.5 0.052 1.8E-06 55.2 6.6 148 238-391 408-571 (699)
313 3sre_A PON1, serum paraoxonase 94.3 3.1 0.00011 38.2 19.0 135 253-392 81-253 (355)
314 2xzh_A Clathrin heavy chain 1; 93.7 3.9 0.00013 37.1 27.9 136 254-391 179-332 (365)
315 2uvk_A YJHT; unknown function, 93.7 4 0.00014 37.0 18.6 48 255-302 168-224 (357)
316 1bpo_A Protein (clathrin); cla 93.6 5.1 0.00017 37.9 20.0 232 81-351 73-331 (494)
317 3d2q_A Muscleblind-like protei 93.5 0.011 3.6E-07 40.8 -0.5 23 36-58 41-63 (70)
318 3d2n_A Muscleblind-like protei 93.4 0.013 4.4E-07 41.7 -0.2 24 37-60 9-34 (83)
319 2e5s_A Otthump00000018578; ZF- 93.3 0.014 4.8E-07 43.0 -0.2 24 37-60 20-45 (98)
320 3kya_A Putative phosphatase; s 93.2 6.2 0.00021 38.0 24.0 144 246-392 260-476 (496)
321 3pbp_A Nucleoporin NUP82; beta 92.6 6.9 0.00024 36.8 18.3 140 245-386 32-207 (452)
322 3d2q_A Muscleblind-like protei 92.1 0.02 6.8E-07 39.4 -0.7 24 36-59 5-30 (70)
323 2e5s_A Otthump00000018578; ZF- 92.0 0.022 7.6E-07 41.9 -0.6 25 34-58 53-77 (98)
324 2zwa_A Leucine carboxyl methyl 91.9 8.5 0.00029 38.8 18.3 182 151-355 410-639 (695)
325 3pbp_A Nucleoporin NUP82; beta 91.7 4 0.00014 38.4 14.1 100 285-391 32-158 (452)
326 2rpp_A Muscleblind-like protei 91.4 0.059 2E-06 38.8 1.1 25 37-61 17-43 (89)
327 3ott_A Two-component system se 91.3 14 0.00046 37.5 22.4 187 174-391 21-220 (758)
328 2rpp_A Muscleblind-like protei 91.3 0.026 8.7E-07 40.7 -0.9 23 36-58 50-72 (89)
329 1bpo_A Protein (clathrin); cla 91.1 11 0.00036 35.8 28.0 136 254-391 178-331 (494)
330 3s94_A LRP-6, low-density lipo 91.0 13 0.00046 36.8 21.4 151 237-392 350-511 (619)
331 3d2n_A Muscleblind-like protei 91.0 0.029 9.8E-07 39.9 -0.9 23 36-58 42-64 (83)
332 4asc_A Kelch repeat and BTB do 90.9 8.2 0.00028 34.2 17.1 107 243-354 147-280 (315)
333 2woz_A Kelch repeat and BTB do 90.4 9.1 0.00031 33.9 15.9 107 243-354 157-290 (318)
334 2cqe_A KIAA1064 protein; CCCH 90.3 0.052 1.8E-06 40.0 -0.0 24 35-58 11-35 (98)
335 1xi4_A Clathrin heavy chain; a 90.3 6.5 0.00022 42.9 15.6 134 254-389 178-329 (1630)
336 2p9w_A MAL S 1 allergenic prot 89.7 12 0.00039 34.0 21.3 201 170-388 8-262 (334)
337 2be1_A Serine/threonine-protei 89.3 1.7 5.8E-05 39.7 9.3 115 245-360 10-139 (339)
338 2zwa_A Leucine carboxyl methyl 87.2 17 0.00057 36.7 16.0 143 244-392 451-636 (695)
339 2rhk_C Cleavage and polyadenyl 86.1 0.11 3.9E-06 35.7 -0.5 26 36-61 43-69 (72)
340 2be1_A Serine/threonine-protei 85.0 1 3.5E-05 41.2 5.1 106 285-392 10-131 (339)
341 2uvk_A YJHT; unknown function, 85.0 14 0.00048 33.2 13.1 63 244-306 19-97 (357)
342 2d9n_A Cleavage and polyadenyl 84.4 0.17 5.7E-06 35.4 -0.3 26 37-62 38-64 (77)
343 3qhy_B Beta-lactamase inhibito 84.3 21 0.0007 31.3 15.5 26 277-303 103-128 (282)
344 3u1l_A PRE-mRNA-splicing facto 82.7 0.13 4.5E-06 44.6 -1.8 27 36-63 69-96 (240)
345 1m9o_A Tristetraproline; Cys3H 82.3 0.42 1.4E-05 33.2 1.1 27 35-61 10-38 (77)
346 3a9g_A Putative uncharacterize 82.2 27 0.00091 31.7 13.7 98 275-377 28-151 (354)
347 3a9g_A Putative uncharacterize 81.9 30 0.001 31.4 16.2 69 236-305 29-115 (354)
348 2ism_A Putative oxidoreductase 81.3 31 0.0011 31.2 15.1 66 237-304 32-114 (352)
349 3sbq_A Nitrous-oxide reductase 81.2 4.7 0.00016 39.4 8.1 91 296-391 299-408 (638)
350 3f7f_A Nucleoporin NUP120; nuc 80.2 10 0.00034 38.2 10.4 70 236-305 222-306 (729)
351 3ott_A Two-component system se 80.1 53 0.0018 33.1 29.6 146 237-391 104-260 (758)
352 2ism_A Putative oxidoreductase 79.4 32 0.0011 31.1 13.2 97 275-377 30-151 (352)
353 2cqe_A KIAA1064 protein; CCCH 74.4 0.62 2.1E-05 34.1 -0.0 28 34-61 33-62 (98)
354 1tl2_A L10, protein (tachylect 68.7 43 0.0015 28.4 10.0 132 246-385 5-157 (236)
355 4gq2_M Nucleoporin NUP120; bet 68.6 60 0.002 34.0 13.4 32 327-359 243-274 (950)
356 3qhy_B Beta-lactamase inhibito 67.9 61 0.0021 28.2 14.8 143 236-391 102-246 (282)
357 2g8s_A Glucose/sorbosone dehyd 64.8 60 0.002 29.3 11.3 95 276-373 18-141 (353)
358 1tl2_A L10, protein (tachylect 57.9 11 0.00038 32.1 4.4 61 325-389 46-114 (236)
359 1cn3_F Fragment of coat protei 54.8 6.2 0.00021 20.4 1.4 18 26-43 2-19 (29)
360 2d9m_A Zinc finger CCCH-type d 53.9 1.7 5.9E-05 29.2 -0.9 24 36-59 19-43 (69)
361 3f7f_A Nucleoporin NUP120; nuc 51.8 19 0.00064 36.3 5.6 37 277-313 223-259 (729)
362 4fhn_B Nucleoporin NUP120; pro 51.4 60 0.002 34.7 9.9 31 328-359 246-276 (1139)
363 4gq2_M Nucleoporin NUP120; bet 49.4 61 0.0021 33.9 9.4 37 236-272 236-274 (950)
364 3u85_B Histone-lysine N-methyl 49.3 9.6 0.00033 18.5 1.5 14 20-33 6-19 (21)
365 3s25_A Hypothetical 7-bladed b 48.3 1.4E+02 0.0048 26.1 14.7 111 254-379 87-202 (302)
366 2g8s_A Glucose/sorbosone dehyd 45.0 1.7E+02 0.0058 26.1 15.2 139 237-379 19-215 (353)
367 1cru_A Protein (soluble quinop 44.4 2E+02 0.0069 26.9 15.8 99 275-377 26-160 (454)
368 1xi4_A Clathrin heavy chain; a 43.9 1.4E+02 0.005 32.8 11.0 97 254-352 85-189 (1630)
369 4b2v_A S64; toxin, ICK; NMR {S 43.8 3.3 0.00011 21.9 -0.6 14 42-55 18-31 (32)
370 3das_A Putative oxidoreductase 42.5 1.9E+02 0.0065 26.0 17.2 69 236-304 32-116 (347)
371 1cru_A Protein (soluble quinop 36.8 2.7E+02 0.0091 26.0 21.4 56 237-292 28-98 (454)
372 1suu_A DNA gyrase subunit A; t 36.4 2.2E+02 0.0076 25.0 14.8 145 245-391 8-181 (312)
373 3sre_A PON1, serum paraoxonase 34.5 2.6E+02 0.0089 25.2 22.5 54 326-379 227-285 (355)
374 3sbq_A Nitrous-oxide reductase 34.3 3.4E+02 0.012 26.6 11.7 93 256-351 299-408 (638)
375 3zwu_A Alkaline phosphatase PH 32.5 1.7E+02 0.0058 28.6 9.0 52 326-378 482-548 (592)
376 2wg3_C Hedgehog-interacting pr 30.8 3.4E+02 0.012 25.4 12.5 27 276-302 14-43 (463)
377 4a9v_A PHOX; hydrolase, beta-p 29.2 1.8E+02 0.0063 28.3 8.4 51 326-377 482-547 (592)
378 4fhn_B Nucleoporin NUP120; pro 29.2 47 0.0016 35.6 4.7 28 245-272 249-276 (1139)
379 3das_A Putative oxidoreductase 27.9 3.3E+02 0.011 24.4 14.7 105 270-378 26-157 (347)
380 2i9o_A MHB8A peptide; beta-hai 26.2 46 0.0016 18.2 2.0 17 18-34 6-22 (37)
381 2lqh_B Forkhead box O3, FOXO3A 32.1 14 0.00048 21.7 0.0 18 24-41 23-40 (52)
382 1zi0_A DNA gyrase subunit A; b 25.1 3.5E+02 0.012 23.7 16.0 143 246-390 4-175 (307)
383 1wp5_A Topoisomerase IV; broke 24.0 3.7E+02 0.013 23.7 14.4 143 246-390 6-173 (323)
384 3uc1_A DNA gyrase subunit A; D 23.4 3.9E+02 0.013 23.7 12.6 144 246-390 4-175 (327)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.5e-39 Score=310.35 Aligned_cols=264 Identities=22% Similarity=0.278 Sum_probs=230.7
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
+...+++||.|++|++||++++.+.. ...||...|.++. |+|.+.++++++.++ +|++||+.+
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~------------~l~~h~~~V~~v~-~~~~~~~l~sgs~D~----~i~iwd~~~ 181 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFER------------TLKGHTDSVQDIS-FDHSGKLLASCSADM----TIKLWDFQG 181 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCE------------EECCCSSCEEEEE-ECTTSSEEEEEETTS----CCCEEETTS
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEE------------EEeccCCcEEEEE-EcCCCCEEEEEeCCC----eEEEEeCCC
Confidence 67789999999999999999887542 4678888999999 999999998777666 999999987
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
. +++.++.+|...|.+++|+|++++|++|+.|++ +||++++.++. ...+|...|.+
T Consensus 182 ~-~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~---------------------~~~~h~~~v~~ 239 (410)
T 1vyh_C 182 F-ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK---------------------TFTGHREWVRM 239 (410)
T ss_dssp S-CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE---------------------EEECCSSCEEE
T ss_pred C-ceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE---------------------EEeCCCccEEE
Confidence 6 788999999999999999999999999999999 69999987653 11267778888
Q ss_pred EEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc----------------------CCEEEEEeCCCc
Q 016134 241 LAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW----------------------DQFLLSCSLDHT 296 (394)
Q Consensus 241 l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~----------------------~~~l~s~s~Dg~ 296 (394)
+.++ +.+|++|+.|++|++||++++++...+..|...|.++.|. +.+|++++.|++
T Consensus 240 ~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 8886 6789999999999999999999999999999999999996 348999999999
Q ss_pred EEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-E
Q 016134 297 IKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-L 374 (394)
Q Consensus 297 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~ 374 (394)
|++||++++..+..+..|...+..+ .|+|++. +|++++.|++|++||+.+++.+..+.. ...|++++|+|++ +
T Consensus 320 i~iwd~~~~~~~~~~~~h~~~v~~v----~~~~~g~-~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTLVGHDNWVRGV----LFHSGGK-FILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEE----EECSSSS-CEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred EEEEECCCCceEEEEECCCCcEEEE----EEcCCCC-EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCE
Confidence 9999999999888887776543333 4699998 899999999999999999888777764 6789999999999 9
Q ss_pred EEEEeCCCeEEEEeCC
Q 016134 375 FFTGDGAGMLGVWKLL 390 (394)
Q Consensus 375 l~tgs~Dg~I~vWd~~ 390 (394)
|++|+.|+.|++|++.
T Consensus 395 l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 395 VVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEETTSEEEEEC--
T ss_pred EEEEeCCCcEEEEeCC
Confidence 9999999999999863
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=297.27 Aligned_cols=266 Identities=16% Similarity=0.162 Sum_probs=227.9
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..++|||.|++++||+++++...-. ....||...|.++. +++.+.++++++.++ +|++||+.+
T Consensus 47 ~~~~l~tgs~D~~v~vW~~~~~~~~~~----------~~l~gh~~~v~~~~-~~~~~~~l~s~s~D~----~i~lWd~~~ 111 (321)
T 3ow8_A 47 NSETVVTGSLDDLVKVWKWRDERLDLQ----------WSLEGHQLGVVSVD-ISHTLPIAASSSLDA----HIRLWDLEN 111 (321)
T ss_dssp --CEEEEEETTSCEEEEEEETTEEEEE----------EEECCCSSCEEEEE-ECSSSSEEEEEETTS----EEEEEETTT
T ss_pred CCCEEEEEcCCCCEEEEECCCCCeeee----------eeeccCCCCEEEEE-ECCCCCEEEEEeCCC----cEEEEECCC
Confidence 356799999999999999986653210 12568889999999 999998888776665 999999998
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
+ +.+..+..|...+.+++|+|++++|++++.|+. +||+++++.... ...|...|.+
T Consensus 112 ~-~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~---------------------~~~~~~~v~~ 169 (321)
T 3ow8_A 112 G-KQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS---------------------LDTRGKFILS 169 (321)
T ss_dssp T-EEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE---------------------EECSSSCEEE
T ss_pred C-CEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE---------------------ecCCCceEEE
Confidence 8 788889999999999999999999999999999 699998876521 1155667778
Q ss_pred EEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccC
Q 016134 241 LAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKE 316 (394)
Q Consensus 241 l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~ 316 (394)
++|+ +++|++|+.|+.|++||+++++++.++.+|...|.+++|+ +++|++++.|++|++||++..+....+..|..
T Consensus 170 ~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 249 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC
Confidence 8886 6789999999999999999999999999999999999998 78999999999999999999888877777665
Q ss_pred CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 317 DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 317 ~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
.+.. +.|+|++. +|++++.|++|+|||+++++.+..+.. ...|.+++|+|++ +|++++.|+.|++||..
T Consensus 250 ~v~~----~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 250 WVLN----VAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEE----EEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ceEE----EEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 4333 34699998 899999999999999999998888765 6789999999999 99999999999999974
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=300.75 Aligned_cols=282 Identities=17% Similarity=0.138 Sum_probs=212.0
Q ss_pred cccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEE
Q 016134 77 SYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLH 156 (394)
Q Consensus 77 ~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~ 156 (394)
++++ ++..++++| |.++|+||.....+...... ...........+...|.+++ |++++. +++++. |++|+
T Consensus 37 ~fs~--dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~-~s~d~~-l~~~s~----dg~v~ 106 (344)
T 4gqb_B 37 RYRS--DGALLLGAS-SLSGRCWAGSLWLFKDPCAA-PNEGFCSAGVQTEAGVADLT-WVGERG-ILVASD----SGAVE 106 (344)
T ss_dssp EECT--TSCEEEEEE-CCSSSCCCEEEEEESSGGGT-TCGGGCSEEEEESSCEEEEE-EETTTE-EEEEET----TSEEE
T ss_pred EECC--CCCEEEEEe-CCceEEeeceeeeecccccc-CCcceeeeeeccCCCEEEEE-EeCCCe-EEEEEC----CCEEE
Confidence 4444 677777666 88999998543322111100 00000001112334688888 999864 444444 45999
Q ss_pred EEEcCCCce---EEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 157 SWFCGEGLT---MLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 157 iWd~~~~~~---~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
|||+.++.. ....+.+|.+.|++|+|+|++++|++|+.|++ |||+++++.+. ..
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~---------------------~~ 165 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS---------------------SY 165 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---------------------EE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE---------------------EE
Confidence 999987632 23445699999999999999999999999999 69999988763 22
Q ss_pred CCCCCCEEEEEec--C-CeEEEEeCCCeEEEEeCCCCceeEEEc--CCCCCcEEEEEc---CCEEEEEeCCCcEEEEEeC
Q 016134 232 DGHTRPVTCLAVG--R-SRLCSGSMDNTIRVWELDTLEPVMTLN--DHTDAPMSLLCW---DQFLLSCSLDHTIKVWFAT 303 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~-~~l~sgs~Dg~V~iwd~~~~~~~~~~~--~h~~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~ 303 (394)
.+|...|.+++|+ + .+|++++.|++|+|||+++++++..+. .|...+.+++|+ +.+|++++.|++|++||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 3778888888886 3 578999999999999999999888875 355678999997 5689999999999999999
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC--EEEEEeCC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--LFFTGDGA 381 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tgs~D 381 (394)
+++.+..+..|...+..+ .|+|++..+|++++.|++|+|||+.+++......|...|++++|+|++ +|++++.|
T Consensus 246 ~~~~~~~~~~h~~~v~~v----~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 246 STSCVLSSAVHSQCVTGL----VFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp C--CCEEEECCSSCEEEE----EECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CCcEEEEEcCCCCCEEEE----EEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCC
Confidence 999988888877554333 469998668999999999999999998776655567889999999998 78899999
Q ss_pred CeEEEEeCCCCC
Q 016134 382 GMLGVWKLLAKP 393 (394)
Q Consensus 382 g~I~vWd~~~~~ 393 (394)
++|++|++.+++
T Consensus 322 ~~v~~w~v~~~~ 333 (344)
T 4gqb_B 322 HQVVHHVVPTEP 333 (344)
T ss_dssp SCEEEEECCC--
T ss_pred CeEEEEECCCCC
Confidence 999999998764
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-36 Score=282.77 Aligned_cols=259 Identities=16% Similarity=0.209 Sum_probs=226.3
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.++. |+|++.++++++.+| +|+|||..++ +.+..+..|...|.+++|+|++++|++++.|+. +
T Consensus 50 ~l~gH~~~v~~~~-~s~d~~~l~s~s~Dg----~v~iWd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 50 TLRGHLAKIYAMH-WGTDSRLLLSASQDG----KLIIWDSYTT-NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp EECCCSSCEEEEE-ECTTSSEEEEEETTT----EEEEEETTTC-CEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred eecCCCCceEEEE-ECCCCCEEEEEeCCC----cEEEEECCCC-CcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4678999999999 999999998877666 9999999887 678889999999999999999999999999998 6
Q ss_pred eecCCCc----E-EEecCCCCcEEEEEEcCC-EEEEEecC------------------CCCCCEEEEEec--CCeEEEEe
Q 016134 199 WNIESSA----E-FSLDGPVGEVYSMVVANE-MLFAGAQD------------------GHTRPVTCLAVG--RSRLCSGS 252 (394)
Q Consensus 199 Wd~~~~~----~-~~~~~~~~~v~~l~~~~~-~l~~~~~~------------------~h~~~V~~l~~~--~~~l~sgs 252 (394)
|++.+.+ . ..+.+|.+.|.++.|.++ .+++++.| +|...|.+++|+ +.+|++|+
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 9998753 1 256789999999999887 77777766 699999999997 67899999
Q ss_pred CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCC
Q 016134 253 MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPD 330 (394)
Q Consensus 253 ~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (394)
.|++|++||+++++++.++.+|...|.+++|+ +++|++++.|++|++||++..+.+..+........+. .+.|+|+
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~--~~~~s~~ 281 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGIT--SVSFSKS 281 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE--EEEECTT
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceE--EEEECCC
Confidence 99999999999999999999999999999998 7899999999999999999877666554322222333 3457999
Q ss_pred CCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEe
Q 016134 331 GKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWK 388 (394)
Q Consensus 331 g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd 388 (394)
++ +|++|+.|+.|++||+.+++.+..+.. ...|.+++|+|++ +|++|+.|+.|+|||
T Consensus 282 g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GR-LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SS-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CC-EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99 999999999999999999888877764 6789999999999 999999999999997
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.4e-37 Score=290.62 Aligned_cols=270 Identities=17% Similarity=0.205 Sum_probs=223.3
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.+|++ ++..|+|||.|+++++||..++.... ....+...|.+++ ++|++.+++++..++ .+
T Consensus 70 ~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~~------------~~~~~~~~v~~~~-~sp~g~~lasg~~d~----~i 130 (354)
T 2pbi_B 70 MDWCK--DKRRIVSSSQDGKVIVWDSFTTNKEH------------AVTMPCTWVMACA-YAPSGCAIACGGLDN----KC 130 (354)
T ss_dssp EEECT--TSSEEEEEETTSEEEEEETTTCCEEE------------EEECSSSCCCEEE-ECTTSSEEEEESTTS----EE
T ss_pred EEECC--CCCEEEEEeCCCeEEEEECCCCCcce------------EEecCCCCEEEEE-ECCCCCEEEEeeCCC----CE
Confidence 34455 77889999999999999988766432 2234555788888 999999988766655 99
Q ss_pred EEEEcCCC-----ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEE
Q 016134 156 HSWFCGEG-----LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFA 228 (394)
Q Consensus 156 ~iWd~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~ 228 (394)
++|++... ......+.+|...|.+++|+|++..|++++.|++ +||+++++.+..
T Consensus 131 ~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~------------------- 191 (354)
T 2pbi_B 131 SVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQS------------------- 191 (354)
T ss_dssp EEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE-------------------
T ss_pred EEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEE-------------------
Confidence 99998532 2346677899999999999999999999999999 699999887531
Q ss_pred EecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEe
Q 016134 229 GAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFA 302 (394)
Q Consensus 229 ~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~ 302 (394)
..+|...|.+++|. +++|++|+.|++|++||+++++++..+..|...|.+++|+ +.+|++++.|++|++||+
T Consensus 192 --~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~ 269 (354)
T 2pbi_B 192 --FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDL 269 (354)
T ss_dssp --EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred --EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 12677777777774 4689999999999999999999999999999999999998 789999999999999999
Q ss_pred CCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeC
Q 016134 303 TGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~ 380 (394)
+..+.+..+..+.....+. .+.|+|++. +|++++.|++|+|||+.+++.+..+.. ...|++++|+|++ +|++|+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~--~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 270 RADREVAIYSKESIIFGAS--SVDFSLSGR-LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp TTTEEEEEECCTTCCSCEE--EEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CCCcEEEEEcCCCccccee--EEEEeCCCC-EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcC
Confidence 9877665554333222333 345799999 999999999999999999988877754 7789999999999 9999999
Q ss_pred CCeEEEEe
Q 016134 381 AGMLGVWK 388 (394)
Q Consensus 381 Dg~I~vWd 388 (394)
|+.|+||+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999996
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.1e-36 Score=280.39 Aligned_cols=272 Identities=19% Similarity=0.285 Sum_probs=223.7
Q ss_pred CCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCe
Q 016134 75 PPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 154 (394)
..++++ ++..+++++.|+++++||++++.... ...+|...|..+. +++++.++++++.++ .
T Consensus 18 ~~~fsp--~~~~l~s~~~dg~v~lWd~~~~~~~~------------~~~~~~~~v~~~~-~~~~~~~l~s~s~d~----~ 78 (304)
T 2ynn_A 18 GIDFHP--TEPWVLTTLYSGRVELWNYETQVEVR------------SIQVTETPVRAGK-FIARKNWIIVGSDDF----R 78 (304)
T ss_dssp EEEECS--SSSEEEEEETTSEEEEEETTTTEEEE------------EEECCSSCEEEEE-EEGGGTEEEEEETTS----E
T ss_pred EEEECC--CCCEEEEEcCCCcEEEEECCCCceeE------------EeeccCCcEEEEE-EeCCCCEEEEECCCC----E
Confidence 344555 77889999999999999999876432 3446677889998 999999998777665 9
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecC
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQD 232 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~ 232 (394)
|++||+.++ +.+..+.+|.+.|++++|+|++++|++|+.|++ +||++++..... ...
T Consensus 79 i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~--------------------~~~ 137 (304)
T 2ynn_A 79 IRVFNYNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--------------------TFE 137 (304)
T ss_dssp EEEEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE--------------------EEC
T ss_pred EEEEECCCC-cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh--------------------hhc
Confidence 999999988 778899999999999999999999999999999 699987754321 223
Q ss_pred CCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCcEEEEEc----CCEEEEEeCCCcEEEEEeCC
Q 016134 233 GHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLN-DHTDAPMSLLCW----DQFLLSCSLDHTIKVWFATG 304 (394)
Q Consensus 233 ~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-~h~~~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~ 304 (394)
+|...|.+++|+ +.+|++|+.|++|++||+++.++...+. .|...+..+.+. +.+|++++.|++|++||+++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 778888888886 3689999999999999999887766664 466788888886 56999999999999999999
Q ss_pred CceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC---EEEEEeC
Q 016134 305 RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK---LFFTGDG 380 (394)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~---~l~tgs~ 380 (394)
++++..+..|......+ .|+|++. +|++++.|++|+|||+.+++.+..+.. ...+.+++|+|++ ++++|+.
T Consensus 218 ~~~~~~~~~h~~~v~~~----~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~ 292 (304)
T 2ynn_A 218 KSCVATLEGHMSNVSFA----VFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (304)
T ss_dssp TEEEEEEECCSSCEEEE----EECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET
T ss_pred CccceeeCCCCCCEEEE----EECCCCC-EEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC
Confidence 99888888776544333 4699998 999999999999999999998888865 5679999999987 4777765
Q ss_pred CCeEEEEeCCCC
Q 016134 381 AGMLGVWKLLAK 392 (394)
Q Consensus 381 Dg~I~vWd~~~~ 392 (394)
|| +.+|++..+
T Consensus 293 ~g-~~~~~~~~~ 303 (304)
T 2ynn_A 293 NG-FTVLSLGND 303 (304)
T ss_dssp TE-EEEEECC--
T ss_pred Cc-eEEEEeccC
Confidence 54 778887654
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=285.91 Aligned_cols=281 Identities=20% Similarity=0.314 Sum_probs=220.0
Q ss_pred CCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCe
Q 016134 75 PPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 154 (394)
..+|++ ++..++++|.|++|+|||++++...... ....||...|.+++ |+|++.++++++.++ +
T Consensus 21 ~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~---------~~~~~h~~~v~~~~-~sp~g~~l~s~s~D~----~ 84 (345)
T 3fm0_A 21 FLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKS---------VLSEGHQRTVRKVA-WSPCGNYLASASFDA----T 84 (345)
T ss_dssp EEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEE---------EECSSCSSCEEEEE-ECTTSSEEEEEETTS----C
T ss_pred EEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeee---------eeccccCCcEEEEE-ECCCCCEEEEEECCC----c
Confidence 345666 8889999999999999999876532111 13468889999999 999999999877766 9
Q ss_pred EEEEEcCCC-ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 155 LHSWFCGEG-LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 155 i~iWd~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
|++||..++ .+.+..+.+|...|.+++|+|++++|++++.|+. +||+.++..... ....
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~------------------~~~~ 146 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYEC------------------VSVL 146 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEE------------------EEEE
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEE------------------EEEe
Confidence 999998765 3578899999999999999999999999999999 699987643211 0122
Q ss_pred CCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCC
Q 016134 232 DGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLE--PVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGR 305 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~--~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~ 305 (394)
.+|...|.+++|+ +.+|++++.|++|++||+++++ +..++.+|...|.+++|+ +++|++++.|++|++||+...
T Consensus 147 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp CCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred cCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 3788888899987 6789999999999999998775 557889999999999998 789999999999999997533
Q ss_pred ce---------------eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc--------eeEEE--ec
Q 016134 306 GN---------------LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM--------ERGRI--FS 360 (394)
Q Consensus 306 ~~---------------~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~--------~~~~~--~~ 360 (394)
.. +..+... ....+. .+.|+|++. +|++++.|+.|++|+..... ..... .+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~--~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h 302 (345)
T 3fm0_A 227 GNEQGVACSGSDPSWKCICTLSGF-HSRTIY--DIAWCQLTG-ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAH 302 (345)
T ss_dssp TCTTCCCCC---CEEEEEEEECSS-CSSCEE--EEEECTTTC-CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSS
T ss_pred CCCccceeeccCCccceeEEecCC-CCCcEE--EEEEecCCC-EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccc
Confidence 21 1111111 112233 345799998 89999999999999987542 11122 13
Q ss_pred CCcEEEEEECCCC--EEEEEeCCCeEEEEeCCCCC
Q 016134 361 KHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 361 ~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~~~ 393 (394)
...|++++|+|++ +|++++.||.|++|++.++.
T Consensus 303 ~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 303 SQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred cCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 5679999999986 89999999999999998764
No 8
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.1e-36 Score=303.56 Aligned_cols=307 Identities=11% Similarity=0.082 Sum_probs=231.8
Q ss_pred CcccccccccccccCCCCCcccccccCCCCC------CCCCCCCCCc----------------------------ccccc
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGY------TGPKNSSSAS----------------------------STVSD 121 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~------~~~~~s~~~~----------------------------~~~~~ 121 (394)
.++++ ++..+++||.|++|+|||++++.. ..|.....+. .....
T Consensus 65 ~~~sp--dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~ 142 (611)
T 1nr0_A 65 AKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN 142 (611)
T ss_dssp EEECT--TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBC
T ss_pred EEECC--CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcce
Confidence 44555 788999999999999999975432 1222211110 00112
Q ss_pred CCCCccceeeeccccccccc-cCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 122 ESGDKSTSKKTTLKNVCCHW-LLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~-~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
..||...|.+++ |+|.+.+ +++++.++ +|++||..+. +++.++.+|...|++++|+|++++|++++.|++ |
T Consensus 143 l~gh~~~v~~v~-f~p~~~~~l~s~s~D~----~v~lwd~~~~-~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~l 216 (611)
T 1nr0_A 143 LTGQARAMNSVD-FKPSRPFRIISGSDDN----TVAIFEGPPF-KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVL 216 (611)
T ss_dssp CCCCSSCEEEEE-ECSSSSCEEEEEETTS----CEEEEETTTB-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ecCCCCCceEEE-ECCCCCeEEEEEeCCC----eEEEEECCCC-eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEE
Confidence 457888899998 9998764 66555554 9999998776 888999999999999999999999999999999 6
Q ss_pred eecCCCcEEEec--------CCCCcEEEEEEcCC--EEEEEecCC---------------------CCCCEEEEEecCCe
Q 016134 199 WNIESSAEFSLD--------GPVGEVYSMVVANE--MLFAGAQDG---------------------HTRPVTCLAVGRSR 247 (394)
Q Consensus 199 Wd~~~~~~~~~~--------~~~~~v~~l~~~~~--~l~~~~~~~---------------------h~~~V~~l~~~~~~ 247 (394)
||+.+++..... +|.+.|.+++|+|+ .+++++.|+ +...+..+.|.++.
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 999998877432 68999999999998 788888771 12234556667778
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEee-cccC--------
Q 016134 248 LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAY-THKE-------- 316 (394)
Q Consensus 248 l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~-~~~~-------- 316 (394)
+++++.|+.|++||.+++++...+.+|...|++++|+ +++|++++.|++|++||+.+++....+. .|..
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s 376 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 376 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEEC
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEEC
Confidence 8888888888888888877777788888888888887 6788888888888888877654322210 0000
Q ss_pred ----------------------------------------------C-----------------------cceEEEEeeE
Q 016134 317 ----------------------------------------------D-----------------------NGVLALGGLN 327 (394)
Q Consensus 317 ----------------------------------------------~-----------------------~~~~~~~~~~ 327 (394)
. ......++.|
T Consensus 377 ~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~ 456 (611)
T 1nr0_A 377 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVAL 456 (611)
T ss_dssp TTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEE
T ss_pred CCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEE
Confidence 0 0000124568
Q ss_pred CCCCCcEEEEEeCCCeEEEEECCCCce--eEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 328 DPDGKPVLICACNDNTVHLYELPSFME--RGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 328 s~~g~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
+|+++ +|++|+.|++|+|||+..... .....+...|++++|+|++ +|++++.|++|++|++.+
T Consensus 457 spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 457 SNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp CTTSC-EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred eCCCC-EEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 99999 999999999999999987643 2334457789999999999 999999999999999875
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-35 Score=300.53 Aligned_cols=292 Identities=13% Similarity=0.119 Sum_probs=240.7
Q ss_pred cccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEE
Q 016134 77 SYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLH 156 (394)
Q Consensus 77 ~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~ 156 (394)
++++ ++..|++++ ++++++||++++.... ...||...|.+++ |+|++.++|+++.++ +|+
T Consensus 25 ~~sp--dg~~l~~~~-~~~v~l~~~~~~~~~~------------~~~~h~~~v~~~~-~spdg~~lasg~~d~----~v~ 84 (611)
T 1nr0_A 25 GNTP--AGDKIQYCN-GTSVYTVPVGSLTDTE------------IYTEHSHQTTVAK-TSPSGYYCASGDVHG----NVR 84 (611)
T ss_dssp EECT--TSSEEEEEE-TTEEEEEETTCSSCCE------------EECCCSSCEEEEE-ECTTSSEEEEEETTS----EEE
T ss_pred eeCC--CCCEEEeCC-CCEEEEecCCCcccCe------------EecCCCCceEEEE-ECCCCcEEEEEeCCC----CEE
Confidence 3444 677888877 5699999998766432 4678888999999 999999999888776 999
Q ss_pred EEEcCCC-ceEEEEecccCCCeEEEEecCCCCEEEEEeCCC----ceeecCCCcEE-EecCCCCcEEEEEEcCC---EEE
Q 016134 157 SWFCGEG-LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG----TAWNIESSAEF-SLDGPVGEVYSMVVANE---MLF 227 (394)
Q Consensus 157 iWd~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg----~vWd~~~~~~~-~~~~~~~~v~~l~~~~~---~l~ 227 (394)
|||+.++ .....++.+|.+.|.+++|+|++++|++++.+. .||.++.++.. .+.+|...|.+++|+|+ .++
T Consensus 85 lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~ 164 (611)
T 1nr0_A 85 IWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRII 164 (611)
T ss_dssp EEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEE
T ss_pred EeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEE
Confidence 9998643 345678899999999999999999999998764 45555555544 57889999999999997 588
Q ss_pred EEecC------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc-------CCCCCcEE
Q 016134 228 AGAQD------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN-------DHTDAPMS 280 (394)
Q Consensus 228 ~~~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-------~h~~~v~~ 280 (394)
+++.| +|...|.+++|+ +++|++++.|++|+|||+.+++++..+. +|...|.+
T Consensus 165 s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~ 244 (611)
T 1nr0_A 165 SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 244 (611)
T ss_dssp EEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred EEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEE
Confidence 88766 799999999998 6799999999999999999999988884 79999999
Q ss_pred EEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEE
Q 016134 281 LLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRI 358 (394)
Q Consensus 281 l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~ 358 (394)
++|+ +++|++++.|++|++||+++++.+..+..... .....+...| ++. .|++++.|+.|++||...++....+
T Consensus 245 v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~-~l~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 245 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR-IEDQQLGIIW--TKQ-ALVSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-GGGCEEEEEE--CSS-CEEEEETTCCEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC-ccceeEEEEE--cCC-EEEEEeCCCcEEEEeCCCCCcceEE
Confidence 9998 78999999999999999998887776654322 1112222334 455 7899999999999999988766555
Q ss_pred ec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 359 FS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 359 ~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.. ...|++++|+|++ +|++++.|+.|++||+.+.
T Consensus 321 ~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 321 YGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 43 6789999999999 9999999999999998754
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-36 Score=287.16 Aligned_cols=284 Identities=14% Similarity=0.131 Sum_probs=211.8
Q ss_pred ccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCC--CCeEEEEEcCCCc-
Q 016134 88 SSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDE--CRFLHSWFCGEGL- 164 (394)
Q Consensus 88 ~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~--~~~i~iWd~~~~~- 164 (394)
..++++...+.|++.... ..+|.+.|.+++ |+|++.+|++++.+... |+.|++|+..++.
T Consensus 20 ~~~~g~~~~~~w~~p~~~----------------p~~H~~~V~~v~-fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~ 82 (357)
T 4g56_B 20 FQSNGSSKGSAWGRPVTA----------------PACMEVQIGAVR-YRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP 82 (357)
T ss_dssp ------------------------------------CCCSEEEEEE-ECSSSCEEEEEECSSSSSCCEEEEEESSCC---
T ss_pred EecCCCccccccCCCCCC----------------cccccCCEEEEE-ECCCCCEEEEEcCCCCccccCeEEEEECCCCCc
Confidence 344667778889876433 235677999999 99999999988765432 6789999986652
Q ss_pred --eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-----EecCCCCcEEEEEEcCC--EEEEEecC-
Q 016134 165 --TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-----SLDGPVGEVYSMVVANE--MLFAGAQD- 232 (394)
Q Consensus 165 --~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-----~~~~~~~~v~~l~~~~~--~l~~~~~~- 232 (394)
.......+|...|++++|+|++. +++++.|++ |||+.+++.. ...+|...|.+++|+|+ .+++++.+
T Consensus 83 ~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg 161 (357)
T 4g56_B 83 NESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF 161 (357)
T ss_dssp CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 23344567999999999999875 556788888 6999887754 34578999999999998 88888877
Q ss_pred -----------------CCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEc--CCCCCcEEEEEc---CCE
Q 016134 233 -----------------GHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLN--DHTDAPMSLLCW---DQF 287 (394)
Q Consensus 233 -----------------~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~--~h~~~v~~l~~~---~~~ 287 (394)
+|...|.+++|+ ..++++++.|++|+|||+++++++..+. .|...+.+++|+ +.+
T Consensus 162 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~ 241 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT 241 (357)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce
Confidence 799999999997 3579999999999999999988766553 467789999997 568
Q ss_pred EEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEE
Q 016134 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVI 367 (394)
Q Consensus 288 l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l 367 (394)
|++++.|+.|++||+++++.+..+..+...+..+ .|+|++..+|++++.|++|+|||+++++.+..+.+...|++|
T Consensus 242 la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l----~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~v 317 (357)
T 4g56_B 242 FACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL----AYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGV 317 (357)
T ss_dssp EEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE----EECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEE
T ss_pred EEEeecccceeEEECCCCcEeEEEeccceeEEEE----EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEE
Confidence 9999999999999999998888887776544333 468988668999999999999999999888777778899999
Q ss_pred EECC-CC-EEEEEeCCCeEEEEeCCCCC
Q 016134 368 EIGP-DK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 368 ~~sp-~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
+|+| ++ +|++++.|++|++|++.++.
T Consensus 318 afsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 318 AWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp EECSSSTTEEEEEETTSCEEEEECC---
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 9998 66 99999999999999997754
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.1e-36 Score=289.17 Aligned_cols=281 Identities=19% Similarity=0.217 Sum_probs=233.7
Q ss_pred CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecc
Q 016134 93 DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEG 172 (394)
Q Consensus 93 d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~ 172 (394)
++++..|+.....+. ....||...|.++. |+|++.++++++.++ +|+|||..++ +....+.+
T Consensus 45 ~~~~~~~~~~~~~~~------------~~l~gH~~~V~~~~-~sp~~~~l~s~s~D~----~v~iWd~~~~-~~~~~~~~ 106 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCC------------RTLQGHSGKVYSLD-WTPEKNWIVSASQDG----RLIVWNALTS-QKTHAIKL 106 (380)
T ss_dssp GGGCCCCCCCCCEEE------------EEECCCSSCEEEEE-ECTTSSCEEEEETTS----EEEEEETTTT-EEEEEEEC
T ss_pred cccccccccceeEEe------------ecccccccEEEEEE-EcCCCCEEEEEeCCC----eEEEEECCCC-ccceEEec
Confidence 455556666544432 14679999999999 999999998877766 9999999887 78889999
Q ss_pred cCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCc--------EEEecCCCCcEEEEEEcCC---EEEEEecC-------
Q 016134 173 HEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSA--------EFSLDGPVGEVYSMVVANE---MLFAGAQD------- 232 (394)
Q Consensus 173 h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~--------~~~~~~~~~~v~~l~~~~~---~l~~~~~~------- 232 (394)
|...|.+++|+|++++|++|+.|+. |||+.+.. ...+.+|.+.|.++.|.++ .+++++.|
T Consensus 107 h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd 186 (380)
T 3iz6_a 107 HCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD 186 (380)
T ss_dssp CCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence 9999999999999999999999999 69987532 1246688889999999875 68887765
Q ss_pred ----------------CCCCCEEEEEec---CCeEEEEeCCCeEEEEeCC-CCceeEEEcCCCCCcEEEEEc--CCEEEE
Q 016134 233 ----------------GHTRPVTCLAVG---RSRLCSGSMDNTIRVWELD-TLEPVMTLNDHTDAPMSLLCW--DQFLLS 290 (394)
Q Consensus 233 ----------------~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~-~~~~~~~~~~h~~~v~~l~~~--~~~l~s 290 (394)
+|...|.++.|+ +++|++|+.|++|++||++ ..+++..+.+|...|.+++|+ +++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 266 (380)
T 3iz6_a 187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT 266 (380)
T ss_dssp TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE
T ss_pred cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE
Confidence 578899999995 6799999999999999998 457888999999999999998 789999
Q ss_pred EeCCCcEEEEEeCCCceeeEeecccCCc---ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe-----cCC
Q 016134 291 CSLDHTIKVWFATGRGNLEAAYTHKEDN---GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-----SKH 362 (394)
Q Consensus 291 ~s~Dg~i~vwd~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-----~~~ 362 (394)
++.|++|++||+++++.+..+..+.... ......+.|+|++. +|++|+.|+.|++||+..++.+..+. +..
T Consensus 267 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 267 GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG 345 (380)
T ss_dssp ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC
T ss_pred EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEEecccCCCCC
Confidence 9999999999999988877665433211 01112335799999 99999999999999999988877763 366
Q ss_pred cEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 363 EVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 363 ~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.|++++|+|++ +|++|+.|+.|++|++...
T Consensus 346 ~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 79999999999 9999999999999999764
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.5e-35 Score=272.08 Aligned_cols=243 Identities=20% Similarity=0.256 Sum_probs=205.6
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.+++ |+|++.++++++.+| .|++||+.++ +.+..+..|..+|.+++|+|++++|++|+.|++ +
T Consensus 8 ~~~~h~~~V~~~~-fsp~~~~l~s~~~dg----~v~lWd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~v 81 (304)
T 2ynn_A 8 TFSNRSDRVKGID-FHPTEPWVLTTLYSG----RVELWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRV 81 (304)
T ss_dssp EEEEECSCEEEEE-ECSSSSEEEEEETTS----EEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEE
T ss_pred eecCCCCceEEEE-ECCCCCEEEEEcCCC----cEEEEECCCC-ceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEE
Confidence 3457888999999 999999999888776 9999999887 788999999999999999999999999999999 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCC-ceeEEEcCCC
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTL-EPVMTLNDHT 275 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~-~~~~~~~~h~ 275 (394)
||+++++.+. ...+|...|.+++|+ +.+|++|+.|++|++||++++ .+...+.+|.
T Consensus 82 wd~~~~~~~~---------------------~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 82 FNYNTGEKVV---------------------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp EETTTCCEEE---------------------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred EECCCCcEEE---------------------EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 9999988753 112677788888887 678999999999999999887 4567789999
Q ss_pred CCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 276 DAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 276 ~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
..|.+++|+ +.+|++++.|++|++||++.......+..... ..+..+.+...+++. +|++++.|++|+|||++++
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCT-TCEEEEEECCSTTCC-EEEEEETTSEEEEEETTTT
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCc-CcEEEEEEEEcCCCC-EEEEEcCCCeEEEEeCCCC
Confidence 999999998 46999999999999999987766655543322 233333333345777 9999999999999999999
Q ss_pred ceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 353 MERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 353 ~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+.+..+.. ...|.+++|+|++ +|++++.||.|++||+.+.
T Consensus 219 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 88888775 6789999999999 9999999999999998764
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.6e-35 Score=269.77 Aligned_cols=272 Identities=20% Similarity=0.317 Sum_probs=227.1
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.+|++ ++..+++++.|+++++|++.++.+.. ...+|...|.++. |+|++.++++++.++ .|
T Consensus 29 ~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~~------------~~~~h~~~v~~~~-~~~~~~~l~s~~~d~----~i 89 (312)
T 4ery_A 29 VKFSP--NGEWLASSSADKLIKIWGAYDGKFEK------------TISGHKLGISDVA-WSSDSNLLVSASDDK----TL 89 (312)
T ss_dssp EEECT--TSSEEEEEETTSCEEEEETTTCCEEE------------EECCCSSCEEEEE-ECTTSSEEEEEETTS----EE
T ss_pred EEECC--CCCEEEEeeCCCeEEEEeCCCcccch------------hhccCCCceEEEE-EcCCCCEEEEECCCC----EE
Confidence 44555 77789999999999999998776532 3467888899999 999999998777665 99
Q ss_pred EEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCC
Q 016134 156 HSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG 233 (394)
Q Consensus 156 ~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~ 233 (394)
++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+. +||+++++.+.. ...
T Consensus 90 ~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~---------------------~~~ 147 (312)
T 4ery_A 90 KIWDVSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT---------------------LPA 147 (312)
T ss_dssp EEEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE---------------------ECC
T ss_pred EEEECCCC-cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE---------------------ecC
Confidence 99999887 788899999999999999999999999999999 699998876531 125
Q ss_pred CCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCcee
Q 016134 234 HTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN-DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNL 308 (394)
Q Consensus 234 h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~ 308 (394)
|...|.+++|+ +++|++++.|+.|++||+++++++..+. .+...+..++|+ +++|++++.|+.|++||+++++.+
T Consensus 148 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 148 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 67778888886 6789999999999999999999888774 466778899998 789999999999999999999888
Q ss_pred eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEe--CCCeE
Q 016134 309 EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGD--GAGML 384 (394)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs--~Dg~I 384 (394)
..+..+.......... ...+++. +|++|+.|+.|++||+.+++.+..+.. ...|.+++|+|++ +|++++ .|+.|
T Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 228 KTYTGHKNEKYCIFAN-FSVTGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp EEECSSCCSSSCCCEE-EECSSSC-EEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred EEEEecCCceEEEEEE-EEeCCCc-EEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE
Confidence 8877766543333221 1235566 999999999999999999988888765 6779999999999 888887 69999
Q ss_pred EEEeCC
Q 016134 385 GVWKLL 390 (394)
Q Consensus 385 ~vWd~~ 390 (394)
++|+.+
T Consensus 306 ~~W~~d 311 (312)
T 4ery_A 306 KLWKSD 311 (312)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 999975
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-34 Score=268.93 Aligned_cols=260 Identities=17% Similarity=0.289 Sum_probs=221.2
Q ss_pred cCCCCccceeeeccccccc-cccCCCeecCCCCCeEEEEEcCCC----ceEEEEecccCCCeEEEEecCCCCEEEEEeCC
Q 016134 121 DESGDKSTSKKTTLKNVCC-HWLLGNCVRGDECRFLHSWFCGEG----LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD 195 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~-~~~~~~~~~g~~~~~i~iWd~~~~----~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D 195 (394)
...||...|.+++ ++|.. .++++++.++ +|++|++... ..++..+.+|...|.+++|+|++++|++++.|
T Consensus 12 ~l~gH~~~V~~l~-~~~~~~~~l~s~s~D~----~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D 86 (319)
T 3frx_A 12 TLEGHNGWVTSLA-TSAGQPNLLLSASRDK----TLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD 86 (319)
T ss_dssp EECCCSSCEEEEE-ECSSCTTEEEEEETTS----EEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEccccceEEEEE-ccCCCccEEEEecCCc----cEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC
Confidence 4678999999999 88854 6777666655 9999998532 24678899999999999999999999999999
Q ss_pred Cc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEEEEecC-----------------CCCCCEEEEEecC--------
Q 016134 196 GT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLFAGAQD-----------------GHTRPVTCLAVGR-------- 245 (394)
Q Consensus 196 g~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~~-----------------~h~~~V~~l~~~~-------- 245 (394)
++ |||+++++.+ .+.+|...|.+++|+++ .+++++.| +|...|.++.+.+
T Consensus 87 ~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 87 KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------C
T ss_pred CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 99 6999999876 67889999999999987 78888877 6889999999963
Q ss_pred CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEE
Q 016134 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLAL 323 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 323 (394)
..|++++.|++|++||+++.+....+.+|...|.+++|+ +++|++++.|++|++||+++.+.+..+..+ ..+.
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~-- 241 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ---DEVF-- 241 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC---SCEE--
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC---CcEE--
Confidence 379999999999999999999999999999999999998 789999999999999999998877766543 2333
Q ss_pred EeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---------CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 324 GGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---------KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 324 ~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---------~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.+.|+|++. +|++++. ..+++|++.....+..+.. ...+.+++|+|++ +|++|+.|+.|+|||+.+.
T Consensus 242 ~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 242 SLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 345799998 7877764 5699999998766665532 3468999999999 9999999999999998764
No 15
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-34 Score=282.48 Aligned_cols=285 Identities=25% Similarity=0.332 Sum_probs=244.4
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..+++|+.|+++++||++++.... ...+|...|.++. ++ +.++++++.+| +|++||+.+
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~~~~------------~~~~h~~~v~~~~-~~--~~~l~s~~~dg----~i~vwd~~~ 188 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGKCLR------------TLVGHTGGVWSSQ-MR--DNIIISGSTDR----TLKVWNAET 188 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCCEEE------------ECCCCSSCEEEEE-EE--TTEEEEEETTS----CEEEEETTT
T ss_pred cCCEEEEEECCCcEEEEECCCCcEEE------------EEcCCCCCEEEEE-ec--CCEEEEEeCCC----eEEEEECCc
Confidence 67789999999999999999877542 3557888898888 65 45666555554 999999988
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCCEEEEEecC-------
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANEMLFAGAQD------- 232 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~~------- 232 (394)
+ +.+..+.+|...|.+++|+ +++|++++.|+. +||+++++.+ .+..|...|.++.+....+++++.+
T Consensus 189 ~-~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 189 G-ECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp T-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEE
T ss_pred C-cEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEE
Confidence 7 8889999999999999995 678999999999 6999998877 6678999999999977788888776
Q ss_pred -----------CCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEE
Q 016134 233 -----------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWF 301 (394)
Q Consensus 233 -----------~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd 301 (394)
+|...|.++.|++.++++++.|+.|++||+++++++..+.+|...+.++.+.+++|++++.|+.|++||
T Consensus 266 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 266 PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWD 345 (445)
T ss_dssp GGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEE
T ss_pred CCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEE
Confidence 689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceeeEeeccc-CCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe------cCCcEEEEEECCCC-
Q 016134 302 ATGRGNLEAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF------SKHEVRVIEIGPDK- 373 (394)
Q Consensus 302 ~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~------~~~~v~~l~~sp~~- 373 (394)
+++++.+..+..+. ....+.++ .++ +. +|++++.||.|++||+.+++.+..+. +...|++++|+|++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~--~~~--~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCL--QFN--KN-FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEE--EEC--SS-EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred CCCCcEEEEEccCCCCCCCEEEE--EEC--CC-EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence 99988888776533 22333333 344 45 89999999999999999999888872 36679999999999
Q ss_pred EEEEEeCCCe----EEEEeCCCCCC
Q 016134 374 LFFTGDGAGM----LGVWKLLAKPS 394 (394)
Q Consensus 374 ~l~tgs~Dg~----I~vWd~~~~~~ 394 (394)
+|++++.||. |.+||+..+++
T Consensus 421 ~la~~~~dg~~~~~l~v~df~~~~~ 445 (445)
T 2ovr_B 421 VCAVGSRNGTEETKLLVLDFDVDMK 445 (445)
T ss_dssp EEEEECSSSSSCCEEEEEECCCCC-
T ss_pred EEEEcccCCCCccEEEEEECCCCCC
Confidence 9999999998 99999998775
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-35 Score=276.91 Aligned_cols=282 Identities=14% Similarity=0.182 Sum_probs=209.8
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..++|||.|++|++||+.++...... ........||...|.+++ ++|++.++++++.++ +|++||+.+
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~-----~~~~~~l~~h~~~V~~~~-~~~~~~~l~s~s~D~----~v~lwd~~~ 107 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYF-----GIPHKALTGHNHFVSDLA-LSQENCFAISSSWDK----TLRLWDLRT 107 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBS-----EEEEEEECCCSSCEEEEE-ECSSTTEEEEEETTS----EEEEEETTS
T ss_pred CCCEEEEEcCCCEEEEEECCcCCccccc-----ccccchhccCCCceEEEE-ECCCCCEEEEEcCCC----cEEEEECCC
Confidence 5667899999999999999865422100 011124578999999999 999999988776665 999999988
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEec---CCCCcEEEEEEcCCEEEEEecCCCCCC
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLD---GPVGEVYSMVVANEMLFAGAQDGHTRP 237 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~---~~~~~v~~l~~~~~~l~~~~~~~h~~~ 237 (394)
+ +.+..+.+|...|.+++|+|++++|++++.|++ +||+......... .|...|.+++|+|+. ..
T Consensus 108 ~-~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~-- 176 (343)
T 2xzm_R 108 G-TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM--------KS-- 176 (343)
T ss_dssp S-CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC--------CS--
T ss_pred C-cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc--------cc--
Confidence 7 778899999999999999999999999999999 6999854443332 333444444443320 00
Q ss_pred EEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeeccc
Q 016134 238 VTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK 315 (394)
Q Consensus 238 V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~ 315 (394)
...+...+.+|++++.|++|++||. +.+....+.+|...|.+++|+ +++|++++.|+.|++||++..........+.
T Consensus 177 ~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~ 255 (343)
T 2xzm_R 177 ANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG 255 (343)
T ss_dssp CSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS
T ss_pred ccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC
Confidence 0000001268999999999999994 567788899999999999998 7899999999999999995443332222222
Q ss_pred CCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeE--EEe------------cCCcEEEEEECCCC-EEEEEeC
Q 016134 316 EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERG--RIF------------SKHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 316 ~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~--~~~------------~~~~v~~l~~sp~~-~l~tgs~ 380 (394)
. .+. .+.|+|++. +|+++ .|+.|++||+.+.+... .+. +...|.+++|+|++ +|++|+.
T Consensus 256 ~--~v~--~v~~sp~~~-~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~ 329 (343)
T 2xzm_R 256 S--TIN--QIAFNPKLQ-WVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFT 329 (343)
T ss_dssp S--CEE--EEEECSSSC-EEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEET
T ss_pred C--cEE--EEEECCCCC-EEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecC
Confidence 2 233 345799987 66654 57889999998765443 222 24569999999999 9999999
Q ss_pred CCeEEEEeCCCC
Q 016134 381 AGMLGVWKLLAK 392 (394)
Q Consensus 381 Dg~I~vWd~~~~ 392 (394)
||.|++|++.+.
T Consensus 330 Dg~v~~w~~~~g 341 (343)
T 2xzm_R 330 DGVIRTFSFETS 341 (343)
T ss_dssp TSEEEEEEEEEE
T ss_pred CceEEEEEEEcc
Confidence 999999998764
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-34 Score=290.78 Aligned_cols=278 Identities=21% Similarity=0.294 Sum_probs=237.6
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..+++++.|+++++||.+..... ...||...|..++ ++|++.++++++.++ .|++||...
T Consensus 273 d~~~l~~~~~d~~i~~w~~~~~~~~-------------~~~~h~~~v~~~~-~~~~~~~l~t~~~d~----~i~~w~~~~ 334 (577)
T 2ymu_A 273 DGQTIASASDDKTVKLWNRNGQLLQ-------------TLTGHSSSVWGVA-FSPDGQTIASASDDK----TVKLWNRNG 334 (577)
T ss_dssp TSSEEEEEETTSCEEEEETTSCEEE-------------EECCCSSCEEEEE-ECTTSSEEEEEETTS----CEEEEETTS
T ss_pred CCCEEEEEeCCCEEEEEeCCCcEEE-------------EEecCCCCeEEEE-ECCCCCEEEEEeCCC----eEEEEeCCC
Confidence 7778999999999999997643321 3567888999999 999999998776655 999999865
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC--EEEEEecC------
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQD------ 232 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~~------ 232 (394)
..+..+.+|...|.+++|+|++++|++++.|+. +||........+..|...|.+++|+|+ .+++++.+
T Consensus 335 --~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~ 412 (577)
T 2ymu_A 335 --QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 412 (577)
T ss_dssp --CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred --CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEE
Confidence 456788999999999999999999999999998 699765555578889999999999998 77777765
Q ss_pred -----------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcE
Q 016134 233 -----------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTI 297 (394)
Q Consensus 233 -----------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i 297 (394)
+|...|++++|+ +.+|++++.|++|++||+ +++.+..+.+|...|.+++|+ +++|++++.|+.|
T Consensus 413 ~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i 491 (577)
T 2ymu_A 413 NRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 491 (577)
T ss_dssp CTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 689999999997 678999999999999996 578888999999999999998 7899999999999
Q ss_pred EEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EE
Q 016134 298 KVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LF 375 (394)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l 375 (394)
++||. +++.+..+..|...+..+ +|+|+++ +|++++.|+.|+|||. +++.+..+.. ...|++++|+||+ +|
T Consensus 492 ~iw~~-~~~~~~~~~~h~~~v~~l----~~s~dg~-~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 492 KLWNR-NGQLLQTLTGHSSSVRGV----AFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTI 564 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEE----EECTTSS-CEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EEEcC-CCCEEEEEeCCCCCEEEE----EEcCCCC-EEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 99995 567777777776544333 4699999 8999999999999996 4566666654 7789999999999 99
Q ss_pred EEEeCCCeEEEEe
Q 016134 376 FTGDGAGMLGVWK 388 (394)
Q Consensus 376 ~tgs~Dg~I~vWd 388 (394)
+|++.|++|++||
T Consensus 565 ~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 565 ASASSDKTVKLWN 577 (577)
T ss_dssp EEEETTSCEEEEC
T ss_pred EEEeCCCEEEEeC
Confidence 9999999999997
No 18
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-34 Score=278.86 Aligned_cols=239 Identities=21% Similarity=0.329 Sum_probs=209.9
Q ss_pred CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--ee
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AW 199 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vW 199 (394)
..||...|.++. |+|.+.++++++.+| +|+|||+.++ +...++.+|.+.|++++|+|++++|++|+.|++ ||
T Consensus 104 l~gh~~~V~~~~-~~p~~~~l~s~s~Dg----~i~vwd~~~~-~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 104 LSGHRSPVTRVI-FHPVFSVMVSASEDA----TIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp EECCSSCEEEEE-ECSSSSEEEEEESSS----CEEEEETTTC-CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred ecccCCcEEEEE-EcCCCCEEEEEeCCC----eEEEEECCCC-cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 458899999999 999999988777766 9999999887 778899999999999999999999999999999 69
Q ss_pred ecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCC
Q 016134 200 NIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDA 277 (394)
Q Consensus 200 d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~ 277 (394)
|+++++.+. ...+|...|.+++|+ +++|++|+.|++|++||+++++++.++.+|...
T Consensus 178 d~~~~~~~~---------------------~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~ 236 (410)
T 1vyh_C 178 DFQGFECIR---------------------TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW 236 (410)
T ss_dssp ETTSSCEEE---------------------CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred eCCCCceeE---------------------EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCcc
Confidence 999887653 223677888888886 678999999999999999999999999999999
Q ss_pred cEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCC--------------------CCcEE
Q 016134 278 PMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPD--------------------GKPVL 335 (394)
Q Consensus 278 v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~--------------------g~~~l 335 (394)
|.++.++ +.+|++++.|++|++||+++.+....+..|...+..+ .|+|+ +. +|
T Consensus 237 v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l 311 (410)
T 1vyh_C 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI----SWAPESSYSSISEATGSETKKSGKPGP-FL 311 (410)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE----EECCSCGGGGGGGCCSCC-------CC-EE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE----EEcCcccccchhhhccccccccCCCCC-EE
Confidence 9999998 7899999999999999999988888777766544333 34665 45 89
Q ss_pred EEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 336 ICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 336 ~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
++|+.|++|++||++++..+..+.. ...|++++|+|++ +|++++.|+.|++||+.+.
T Consensus 312 ~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 312 LSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred EEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999999999999988877764 6779999999999 9999999999999998754
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-34 Score=278.53 Aligned_cols=283 Identities=20% Similarity=0.294 Sum_probs=216.2
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCC----CCCCCC--CccccccCCCCccceeeeccccccccccCCCee
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTG----PKNSSS--ASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCV 147 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~----~~~s~~--~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~ 147 (394)
...+|++ ++..+++|+ |+++++|+++++.... +..... ..........+...|+++. |+|++.++++++.
T Consensus 68 ~~v~fsp--dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~-~s~dg~~l~s~~~ 143 (393)
T 1erj_A 68 CCVKFSN--DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVC-FSPDGKFLATGAE 143 (393)
T ss_dssp CEEEECT--TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEE-ECTTSSEEEEEET
T ss_pred EEEEECC--CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEE-ECCCCCEEEEEcC
Confidence 3445666 788888876 7899999999876421 110000 0000001112334588999 9999999987776
Q ss_pred cCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCE
Q 016134 148 RGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 148 ~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
++ .|++||+.++ +.+..+.+|...|++++|+|++++|++++.|++ +||+++++.....
T Consensus 144 d~----~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~--------------- 203 (393)
T 1erj_A 144 DR----LIRIWDIENR-KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL--------------- 203 (393)
T ss_dssp TS----CEEEEETTTT-EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE---------------
T ss_pred CC----eEEEEECCCC-cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE---------------
Confidence 65 9999999887 888999999999999999999999999999999 6999998765432
Q ss_pred EEEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEE-------cCCCCCcEEEEEc--CCEEEEEeC
Q 016134 226 LFAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTL-------NDHTDAPMSLLCW--DQFLLSCSL 293 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~-------~~h~~~v~~l~~~--~~~l~s~s~ 293 (394)
.+...+.+++|+ +.+|++|+.|+.|++||+++++++..+ .+|...|.+++|+ +++|++++.
T Consensus 204 -------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 204 -------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp -------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred -------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 233456666664 578999999999999999999888777 5799999999998 789999999
Q ss_pred CCcEEEEEeCCCce------------eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-
Q 016134 294 DHTIKVWFATGRGN------------LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS- 360 (394)
Q Consensus 294 Dg~i~vwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~- 360 (394)
|++|++||++.... ...+..|... +. .+.++|++. +|++++.|+.|++||+.+++.+..+..
T Consensus 277 d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~--~~~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 277 DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDF--VL--SVATTQNDE-YILSGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp TSEEEEEEC---------------CEEEEEECCSSC--EE--EEEECGGGC-EEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEECCCCCCcccccCCCCCcceEEEecccCc--EE--EEEECCCCC-EEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 99999999976432 2333334332 22 334689998 999999999999999999988877764
Q ss_pred CCcEEEEEECC------CC-EEEEEeCCCeEEEEeCCCC
Q 016134 361 KHEVRVIEIGP------DK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 361 ~~~v~~l~~sp------~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
...|.+++|++ ++ +|++|+.|+.|+||++...
T Consensus 352 ~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 352 RNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp SSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 67899999986 56 9999999999999998653
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-35 Score=273.53 Aligned_cols=268 Identities=24% Similarity=0.285 Sum_probs=198.9
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCcccccc-CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC--
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSD-ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE-- 162 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~-~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~-- 162 (394)
.+++||.|+++++||++++...... .. ..+|...|.+++ |+|.+.++++++.++ +|+|||...
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~---------~~~~~~h~~~v~~v~-~sp~~~~las~s~D~----~v~iw~~~~~~ 91 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLID---------VLDETAHKKAIRSVA-WRPHTSLLAAGSFDS----TVSIWAKEESA 91 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEE---------EECTTCCCSCEEEEE-ECTTSSEEEEEETTS----CEEEEEC----
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEE---------EEecCCccCCEEEEE-ECCCCCEEEEEeCCC----cEEEEEcccCc
Confidence 7899999999999999875432100 12 224888999999 999999998877666 999999853
Q ss_pred ----CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCC-cEEEecCCCCcEEEEEEcCCEEEEEecCCCC
Q 016134 163 ----GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS-AEFSLDGPVGEVYSMVVANEMLFAGAQDGHT 235 (394)
Q Consensus 163 ----~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~-~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~ 235 (394)
..+++..+.+|...|.+++|+|++++|++|+.|++ |||+... .... ......+|.
T Consensus 92 ~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~------------------~~~~~~~h~ 153 (330)
T 2hes_X 92 DRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYE------------------CISVLQEHS 153 (330)
T ss_dssp ---CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCE------------------EEEEECCCS
T ss_pred CccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeE------------------EEEEeccCC
Confidence 23678889999999999999999999999999999 6999532 2110 001223788
Q ss_pred CCEEEEEec--CCeEEEEeCCCeEEEEeCCCC--ceeEEEcCCCCCcEEEEEc----CCEEEEEeCCCcEEEEEeCCCc-
Q 016134 236 RPVTCLAVG--RSRLCSGSMDNTIRVWELDTL--EPVMTLNDHTDAPMSLLCW----DQFLLSCSLDHTIKVWFATGRG- 306 (394)
Q Consensus 236 ~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~--~~~~~~~~h~~~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~~~- 306 (394)
..|.+++|+ +.+|++++.|++|++||+.++ +++..+.+|...|.++.|+ +.+|++++.|++|++||++...
T Consensus 154 ~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~ 233 (330)
T 2hes_X 154 QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDE 233 (330)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECT
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCc
Confidence 888888887 678999999999999998776 6788999999999999998 2489999999999999987531
Q ss_pred -------eeeEeec-ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc--eeEEEe--cCC-cEEEEEECC--
Q 016134 307 -------NLEAAYT-HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM--ERGRIF--SKH-EVRVIEIGP-- 371 (394)
Q Consensus 307 -------~~~~~~~-~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~--~~~~~~--~~~-~v~~l~~sp-- 371 (394)
....+.. |. ..+.++ .|++++ +|++++.|+.|+|||..+++ ...... +.. .|.+++|+|
T Consensus 234 ~~~~~~~~~~~~~~~h~--~~v~~v--~~s~~~--~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 234 DDQQEWVCEAILPDVHK--RQVYNV--AWGFNG--LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp TSCEEEEEEEECCSCCS--SCEEEE--EECTTS--CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred cccceeEEeeecccccc--cceEEE--EEcCCC--EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 2222222 22 233333 457654 68999999999999998774 233332 233 799999999
Q ss_pred CC-EEEEEeCCCeEEEEeCCC
Q 016134 372 DK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 372 ~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
++ +|++|+.||.|+||+++.
T Consensus 308 ~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 308 GKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --CCEEEEETTSEEEEEEC--
T ss_pred CceEEEEecCCCcEEEEEecc
Confidence 56 999999999999999875
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.7e-34 Score=285.02 Aligned_cols=285 Identities=21% Similarity=0.313 Sum_probs=242.4
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.++++ ++..+++++.|+++++||.+.... ....+|...|.++. ++|++.+++++..++ .|
T Consensus 227 ~~~s~--dg~~l~~~~~d~~i~~w~~~~~~~-------------~~~~~~~~~v~~v~-~~~d~~~l~~~~~d~----~i 286 (577)
T 2ymu_A 227 VAFSP--DGQTIASASDDKTVKLWNRNGQLL-------------QTLTGHSSSVNGVA-FRPDGQTIASASDDK----TV 286 (577)
T ss_dssp EEECT--TSSCEEEEETTSCEEEECTTSCEE-------------EEECCCSSCEEEEE-ECTTSSEEEEEETTS----CE
T ss_pred EEECC--CCCEEEEEeCCCEEEEEeCCCCEE-------------EEEecCCCCEEEEE-EcCCCCEEEEEeCCC----EE
Confidence 34444 777899999999999999754322 13567788899999 999999988776655 89
Q ss_pred EEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC--EEEEEec
Q 016134 156 HSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQ 231 (394)
Q Consensus 156 ~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~ 231 (394)
++||... +.+..+.+|...|.+++|+|++++|++++.|+. +||........+..+...+.+++|+|+ .++++..
T Consensus 287 ~~w~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 364 (577)
T 2ymu_A 287 KLWNRNG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASD 364 (577)
T ss_dssp EEEETTS--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCC--cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeC
Confidence 9999754 677889999999999999999999999999998 699988877788899999999999998 7777776
Q ss_pred C-----------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEE
Q 016134 232 D-----------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLS 290 (394)
Q Consensus 232 ~-----------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s 290 (394)
+ +|...|.+++|+ +++|++++.|+.|++||. +++.+..+.+|...|++++|+ +++|++
T Consensus 365 dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~ 443 (577)
T 2ymu_A 365 DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIAS 443 (577)
T ss_dssp TSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEE
Confidence 5 689999999997 678999999999999995 578889999999999999998 789999
Q ss_pred EeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEE
Q 016134 291 CSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEI 369 (394)
Q Consensus 291 ~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~ 369 (394)
++.|++|++||+ +++.+..+..|...... +.|+|+++ +|++++.|+.|+|||. +++.+..+.. ...|++++|
T Consensus 444 ~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~----~~~spd~~-~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~ 516 (577)
T 2ymu_A 444 ASDDKTVKLWNR-NGQLLQTLTGHSSSVRG----VAFSPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF 516 (577)
T ss_dssp EETTSEEEEEET-TSCEEEEEECCSSCEEE----EEECTTSC-EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEE
T ss_pred EcCCCEEEEEEC-CCCEEEEEcCCCCCEEE----EEEcCCCC-EEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEE
Confidence 999999999996 45666777666654333 34699999 9999999999999996 4566666654 778999999
Q ss_pred CCCC-EEEEEeCCCeEEEEeCC
Q 016134 370 GPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 370 sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
+|++ +|++++.|+.|++||+.
T Consensus 517 s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 517 SPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTT
T ss_pred cCCCCEEEEEECcCEEEEEeCC
Confidence 9999 99999999999999964
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.5e-33 Score=261.79 Aligned_cols=262 Identities=16% Similarity=0.264 Sum_probs=217.6
Q ss_pred cCCCCccceeeecccccc-ccccCCCeecCCCCCeEEEEEcCCC----ceEEEEecccCCCeEEEEecCCCCEEEEEeCC
Q 016134 121 DESGDKSTSKKTTLKNVC-CHWLLGNCVRGDECRFLHSWFCGEG----LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD 195 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~-~~~~~~~~~~g~~~~~i~iWd~~~~----~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D 195 (394)
.++||...|++++ |+|. +.++++++.|+ +|+|||+.+. ..+...+.+|...|.+++|+|++++|++++.|
T Consensus 33 tL~GH~~~V~~v~-~sp~~~~~l~S~s~D~----~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 33 TLKGHNGWVTQIA-TTPQFPDMILSASRDK----TIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EECCCSSCEEEEE-ECTTCTTEEEEEETTS----CEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EECCccCCEEEEE-EeCCCCCEEEEEcCCC----eEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 4789999999999 9997 67888777665 9999998654 24678899999999999999999999999999
Q ss_pred Cc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEEEEecC-------------------CCCCCEEEEEec----CCe
Q 016134 196 GT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLFAGAQD-------------------GHTRPVTCLAVG----RSR 247 (394)
Q Consensus 196 g~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~~-------------------~h~~~V~~l~~~----~~~ 247 (394)
+. +|+....... ....+...+..+.+.++ .+++++.+ +|...|..++|. ..+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 99 5998887766 45566677778888776 77777665 688899999986 357
Q ss_pred EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEe
Q 016134 248 LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGG 325 (394)
Q Consensus 248 l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 325 (394)
+++++.|+.|++||+++++++..+.+|...|++++|+ +++|++++.|+.|++||+++.+.+..+..+. .+. ..
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~--~~ 262 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---IIN--AL 262 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---CEE--EE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---eEE--ee
Confidence 8999999999999999999999999999999999998 7899999999999999999988777665432 233 23
Q ss_pred eECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe----------cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCCC
Q 016134 326 LNDPDGKPVLICACNDNTVHLYELPSFMERGRIF----------SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKPS 394 (394)
Q Consensus 326 ~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~----------~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~~ 394 (394)
.++|++. +++++.|+.|+|||+++...+..+. +...|++++|+|++ +|++|+.||.|+|||+.+..|
T Consensus 263 ~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 263 CFSPNRY--WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EECSSSS--EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred ecCCCCc--eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 4688876 5556679999999999887766553 24579999999999 999999999999999988653
No 23
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-35 Score=281.05 Aligned_cols=299 Identities=16% Similarity=0.211 Sum_probs=244.7
Q ss_pred CCCccccccccc-ccccC----------CCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccccccc
Q 016134 74 SPPSYNRLKNNL-WVSSG----------SEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWL 142 (394)
Q Consensus 74 ~~~~~~~~~~~~-~~~s~----------s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 142 (394)
...+|++ ++. .++++ +.|+++++||++++...... ...+|...|.++. |+|++.++
T Consensus 16 ~~~~~sp--~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~----------~~~~~~~~v~~~~-~s~~~~~l 82 (416)
T 2pm9_A 16 ATFAWSH--DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPI----------ASLQVDSKFNDLD-WSHNNKII 82 (416)
T ss_dssp CBCCBCS--SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCS----------CCCCCSSCEEEEE-ECSSSSCE
T ss_pred ceEeeCC--CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEE----------EEEecCCceEEEE-ECCCCCeE
Confidence 4566666 655 67777 88999999999987643211 2345777899999 99999999
Q ss_pred CCCeecCCCCCeEEEEEcCC---CceEEEEecccCCCeEEEEecCC-CCEEEEEeCCCc--eeecCCCc------EE---
Q 016134 143 LGNCVRGDECRFLHSWFCGE---GLTMLAKLEGHEKAVSGIALPLR-SDKLFSGSRDGT--AWNIESSA------EF--- 207 (394)
Q Consensus 143 ~~~~~~g~~~~~i~iWd~~~---~~~~~~~l~~h~~~V~~l~~s~~-~~~l~sgs~Dg~--vWd~~~~~------~~--- 207 (394)
++++.+| .|++||+.+ +.+.+..+.+|...|++++|+|+ +++|++++.|+. +||+.+++ ..
T Consensus 83 ~~~~~dg----~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~ 158 (416)
T 2pm9_A 83 AGALDNG----SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTP 158 (416)
T ss_dssp EEEESSS----CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCC
T ss_pred EEEccCC----eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccc
Confidence 8877666 999999976 34688999999999999999998 899999999999 69999876 22
Q ss_pred -EecCCCCcEEEEEEcCC---EEEEEecC------------------CC------CCCEEEEEecC---CeEEEEeCCC-
Q 016134 208 -SLDGPVGEVYSMVVANE---MLFAGAQD------------------GH------TRPVTCLAVGR---SRLCSGSMDN- 255 (394)
Q Consensus 208 -~~~~~~~~v~~l~~~~~---~l~~~~~~------------------~h------~~~V~~l~~~~---~~l~sgs~Dg- 255 (394)
....+...|.+++|+++ .+++++.+ .| ...|.+++|++ .+|++++.|+
T Consensus 159 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 159 GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 23568889999999986 77777766 22 78899999982 5899999999
Q ss_pred --eEEEEeCCCC-ceeEEEc-CCCCCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeEC
Q 016134 256 --TIRVWELDTL-EPVMTLN-DHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLND 328 (394)
Q Consensus 256 --~V~iwd~~~~-~~~~~~~-~h~~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s 328 (394)
.|++||++++ +++..+. +|...|.+++|+ +.+|++++.|+.|++||+++++.+..+..|......++ |+
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~----~s 314 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTK----FA 314 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEE----EC
T ss_pred CceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEE----EC
Confidence 9999999986 6777888 899999999996 67999999999999999999988888887776555444 59
Q ss_pred CCCCcEEEEEeCCCeEEEEECCCCceeEEEe------------------------------------cCCcEEEEEECCC
Q 016134 329 PDGKPVLICACNDNTVHLYELPSFMERGRIF------------------------------------SKHEVRVIEIGPD 372 (394)
Q Consensus 329 ~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~------------------------------------~~~~v~~l~~sp~ 372 (394)
|++..+|++++.|+.|+|||+.+........ +...+.+++|+|+
T Consensus 315 ~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d 394 (416)
T 2pm9_A 315 PEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFG 394 (416)
T ss_dssp TTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETT
T ss_pred CCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeC
Confidence 9984499999999999999998765322110 2345779999999
Q ss_pred C-EEEEEeCCCeEEEEeCCCCC
Q 016134 373 K-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 373 ~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
| +|++++.|+.|+||++.+++
T Consensus 395 g~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 395 GKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp TEEECBCTTSSCBCCBCCCCC-
T ss_pred CeEEEEeCCCCeEEEEEeccCC
Confidence 9 99999999999999998864
No 24
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-34 Score=274.61 Aligned_cols=301 Identities=14% Similarity=0.169 Sum_probs=238.1
Q ss_pred CCCccccccccc-ccccCCCCCccccccc----CCCCC------CCCCCCCCCccccccCCCCccceeeecccccccccc
Q 016134 74 SPPSYNRLKNNL-WVSSGSEDRIPHVRNR----ENPGY------TGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWL 142 (394)
Q Consensus 74 ~~~~~~~~~~~~-~~~s~s~d~~~~~w~~----~~~~~------~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~ 142 (394)
...+|++ ++. .+++++.|+++++|++ +++.. ...... .........+|...|.++. |+|++.++
T Consensus 49 ~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~-~s~~~~~l 123 (425)
T 1r5m_A 49 VSSTWNP--LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRH--PFALSASSGKTTNQVTCLA-WSHDGNSI 123 (425)
T ss_dssp SEEEECS--SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEEC--CCCCC------CBCEEEEE-ECTTSSEE
T ss_pred EEEEECC--CCCcEEEEecCCceEEEEEEecccCCccccccccccccccc--cccccccccCCCCceEEEE-EcCCCCEE
Confidence 3455665 777 8999999999999999 76662 100000 0000001224677999999 99999999
Q ss_pred CCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCc----
Q 016134 143 LGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGE---- 215 (394)
Q Consensus 143 ~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~---- 215 (394)
++++.+| .|++||. ++ +.+..+.+|...|.+++|+|++++|++++.|+. +||+.+++.. .+..+...
T Consensus 124 ~~~~~dg----~i~i~~~-~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 124 VTGVENG----ELRLWNK-TG-ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEETTS----CEEEEET-TS-CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEeCCC----eEEEEeC-CC-CeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 8877666 8999993 33 678889999999999999999999999999998 6999998876 34444444
Q ss_pred -----------EEEEEEcCC-EEEEEecC------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCC
Q 016134 216 -----------VYSMVVANE-MLFAGAQD------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELD 263 (394)
Q Consensus 216 -----------v~~l~~~~~-~l~~~~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~ 263 (394)
+.++.|.++ .+++++.+ .|...|.+++|+ +.+|++++.|+.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 888888887 77776655 688999999997 6789999999999999999
Q ss_pred CCceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC
Q 016134 264 TLEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN 342 (394)
Q Consensus 264 ~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg 342 (394)
+++++..+..|...|.++.|+ ..+|++++.|+.|++||+++++.+..+..+...... +.|+|++. +|++++.|+
T Consensus 278 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~----~~~s~~~~-~l~~~~~dg 352 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFA----GRISQDGQ-KYAVAFMDG 352 (425)
T ss_dssp SBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEE----EEECTTSS-EEEEEETTS
T ss_pred CCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEE----EEEcCCCC-EEEEEECCC
Confidence 999999999999999999999 339999999999999999998888777766544333 34699998 999999999
Q ss_pred eEEEEECCCCc--------------------eeEEEecC--C-cEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 343 TVHLYELPSFM--------------------ERGRIFSK--H-EVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 343 ~I~iwd~~~~~--------------------~~~~~~~~--~-~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
.|++||+.++. .+..+... . .|++++|+|++ +|++++.||.|++|+++
T Consensus 353 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 353 QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999877 66666552 3 89999999999 99999999999999985
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.7e-34 Score=267.61 Aligned_cols=242 Identities=16% Similarity=0.139 Sum_probs=188.6
Q ss_pred CccceeeeccccccccccCCCeecCCCCCeEEEEEcC----------CCceEEEEecccCCCeEEEEecCCCCEEEEEeC
Q 016134 125 DKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCG----------EGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR 194 (394)
Q Consensus 125 ~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~----------~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~ 194 (394)
+.+.|.+++ |+|++.++++++ ++ ++|+||.. ...........|...|.+++|+|++ .|++|+.
T Consensus 29 ~~~~v~~~~-fs~dG~~l~~~s-d~----~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~ 101 (344)
T 4gqb_B 29 MERQLEAAR-YRSDGALLLGAS-SL----SGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD 101 (344)
T ss_dssp CCSEEEEEE-ECTTSCEEEEEE-CC----SSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET
T ss_pred ccCCEEEEE-ECCCCCEEEEEe-CC----ceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC
Confidence 445788998 999999998655 33 55666521 0111122233467889999999984 7889999
Q ss_pred CCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEE
Q 016134 195 DGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMT 270 (394)
Q Consensus 195 Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~ 270 (394)
||+ |||+++++..... .....+|...|++++|+ +++|++|+.|++|+|||+++++++.+
T Consensus 102 dg~v~lWd~~~~~~~~~~-----------------~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~ 164 (344)
T 4gqb_B 102 SGAVELWELDENETLIVS-----------------KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS 164 (344)
T ss_dssp TSEEEEEEECTTSSCEEE-----------------EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCEEEEEeccCCCceeEe-----------------eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999 6999988754211 00122788899999997 68999999999999999999999999
Q ss_pred EcCCCCCcEEEEEc--C-CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEE
Q 016134 271 LNDHTDAPMSLLCW--D-QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLY 347 (394)
Q Consensus 271 ~~~h~~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iw 347 (394)
+.+|...|.+++|+ + .+|++++.|++|++||+++++....+........+.+ +.|+|++..+|++|+.|++|+||
T Consensus 165 ~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~l~sg~~dg~v~~w 242 (344)
T 4gqb_B 165 YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTS--LAWHPQQSEVFVFGDENGTVSLV 242 (344)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEE--EEECSSCTTEEEEEETTSEEEEE
T ss_pred EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeecccee--eeecCCCCcceEEeccCCcEEEE
Confidence 99999999999998 3 5899999999999999999888777655444333443 34788766699999999999999
Q ss_pred ECCCCceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEEEeCCCC
Q 016134 348 ELPSFMERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 348 d~~~~~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~~ 392 (394)
|+++++.+..+.. ...|++++|+|++ +|++|+.|++|+|||+.+.
T Consensus 243 d~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 243 DTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp ESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 9999988888765 7789999999997 7999999999999998764
No 26
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.1e-33 Score=258.40 Aligned_cols=240 Identities=16% Similarity=0.254 Sum_probs=203.2
Q ss_pred CCCCccceeeecccccc----ccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCC
Q 016134 122 ESGDKSTSKKTTLKNVC----CHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG 196 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~----~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg 196 (394)
..+|...|.+++ |+++ +.++++++.++ +|+||++.++. .....+.+|...|.+++|++++.++++++.|+
T Consensus 28 ~~~H~~~V~~v~-~~~~~~~~~~~l~tgs~D~----~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 28 EQAHDDAIWSVA-WGTNKKENSETVVTGSLDD----LVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp TTSSSSCEEEEE-EC-------CEEEEEETTS----CEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred cccCCCcEEEEE-EecCCCCCCCEEEEEcCCC----CEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 457888999999 8875 44666555554 99999997652 45567899999999999999999999999999
Q ss_pred c--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 197 T--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 197 ~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
+ +||+++++.+.. ...|...+.+++|+ +++|++++.|+.|++||+++++....+.
T Consensus 103 ~i~lWd~~~~~~~~~---------------------~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~ 161 (321)
T 3ow8_A 103 HIRLWDLENGKQIKS---------------------IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD 161 (321)
T ss_dssp EEEEEETTTTEEEEE---------------------EECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE
T ss_pred cEEEEECCCCCEEEE---------------------EeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec
Confidence 9 699999877631 11455566677776 6789999999999999999999999999
Q ss_pred CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC
Q 016134 273 DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP 350 (394)
Q Consensus 273 ~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~ 350 (394)
.|...|.+++|+ +++|++++.|+.|++||+++++.+..+..|...+..++ |+|+++ +|++++.|++|+|||++
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~----~spd~~-~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT----FSPDSQ-LLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEE----ECTTSC-EEEEECTTSCEEEEETT
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEE----EcCCCC-EEEEEcCCCeEEEEECC
Confidence 999999999998 78999999999999999999988888877776555444 599998 99999999999999999
Q ss_pred CCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 351 SFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 351 ~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+++....+.. ...|.+++|+|++ +|++++.|+.|++||+.+.
T Consensus 237 ~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 237 HANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 9988877765 6679999999999 9999999999999999764
No 27
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-33 Score=274.57 Aligned_cols=283 Identities=20% Similarity=0.309 Sum_probs=231.6
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..+++||.|++|++||++++.... ...+|...|.++. +++.+ ++++++.+ ++|++||+.+
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~~~~------------~~~~h~~~V~~l~-~~~~~-~l~s~s~d----g~i~vwd~~~ 192 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKKFLL------------QLSGHDGGVWALK-YAHGG-ILVSGSTD----RTVRVWDIKK 192 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEE------------EECCCSSCEEEEE-ECSTT-EEEEEETT----SCEEEEETTT
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEE------------EEeCCCcCEEEEE-EcCCC-EEEEEeCC----CCEEEEECCC
Confidence 56789999999999999999877542 3558888999999 88877 55555554 4999999998
Q ss_pred CceEEEEecccCCCeEEEEec--CCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC--EEEEEecCCCCC
Q 016134 163 GLTMLAKLEGHEKAVSGIALP--LRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQDGHTR 236 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s--~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~~~h~~ 236 (394)
+ +.+..+.+|...|.+++|+ +++++|++++.|+. +||+.++..............+.+.+. ..+.....+|..
T Consensus 193 ~-~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 193 G-CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp T-EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred C-cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 7 7889999999999999998 57899999999999 699998765432222211222222222 233445668999
Q ss_pred CEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecc
Q 016134 237 PVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTH 314 (394)
Q Consensus 237 ~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~ 314 (394)
.|.++..++++|++++.|+.|++||+++++++..+.+|...|.++.|+ +++|++++.|+.|++||+++++.+..+..|
T Consensus 272 ~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 272 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 999999899999999999999999999999999999999999999998 789999999999999999999988888777
Q ss_pred cCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 315 KEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 315 ~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
......+. ++ +. +|++++.|+.|++||+.+........+...+..++|++++ +|++++ |+.|++||+.+.
T Consensus 352 ~~~v~~~~----~~--~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 352 TALVGLLR----LS--DK-FLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp SSCEEEEE----EC--SS-EEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred CCcEEEEE----Ec--CC-EEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 65543333 34 44 8999999999999999998888777777788889999999 888887 899999999865
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.9e-33 Score=286.20 Aligned_cols=268 Identities=19% Similarity=0.275 Sum_probs=218.0
Q ss_pred cccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc
Q 016134 85 LWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL 164 (394)
Q Consensus 85 ~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~ 164 (394)
..++|||.|++|++|++.+...... .......||...|.++. ++|++.++++++.+| .|+|||+.++
T Consensus 396 ~~l~s~s~D~~i~~W~~~~~~~~~~-------~~~~~~~~h~~~v~~v~-~s~~g~~l~sgs~Dg----~v~vwd~~~~- 462 (694)
T 3dm0_A 396 DIIVSASRDKSIILWKLTKDDKAYG-------VAQRRLTGHSHFVEDVV-LSSDGQFALSGSWDG----ELRLWDLAAG- 462 (694)
T ss_dssp SEEEEEETTSEEEEEECCCSTTCSC-------EEEEEEECCSSCEEEEE-ECTTSSEEEEEETTS----EEEEEETTTT-
T ss_pred CEEEEEeCCCcEEEEEccCCCcccc-------cccceecCCCCcEEEEE-ECCCCCEEEEEeCCC----cEEEEECCCC-
Confidence 4688999999999999986542100 01123568999999999 999999998777666 9999999887
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEE
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLA 242 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~ 242 (394)
+.+..+.+|...|.+++|+|++++|+|++.|++ |||+.......+.. ...+|...|.+++
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~------------------~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE------------------GGEGHRDWVSCVR 524 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS------------------STTSCSSCEEEEE
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc------------------CCCCCCCcEEEEE
Confidence 788899999999999999999999999999999 69986654433221 1126888899999
Q ss_pred ecC----CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccC
Q 016134 243 VGR----SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKE 316 (394)
Q Consensus 243 ~~~----~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~ 316 (394)
|++ ..|++++.|++|+|||++++++...+.+|...|++++|+ +++|++++.|++|++||+++++.+..+..+
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-- 602 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-- 602 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS--
T ss_pred EeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC--
Confidence 973 479999999999999999999999999999999999998 789999999999999999988776655432
Q ss_pred CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC--------------------CcEEEEEECCCC-EE
Q 016134 317 DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK--------------------HEVRVIEIGPDK-LF 375 (394)
Q Consensus 317 ~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--------------------~~v~~l~~sp~~-~l 375 (394)
..+. .++|+|++. +|++++ |+.|+|||++++..+..+... -.+++++|+|++ +|
T Consensus 603 -~~v~--~~~~sp~~~-~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 603 -SVIH--ALCFSPNRY-WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp -SCEE--EEEECSSSS-EEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred -CcEE--EEEEcCCCc-EEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 2233 345799987 666554 677999999998877665421 137899999999 99
Q ss_pred EEEeCCCeEEEEeCC
Q 016134 376 FTGDGAGMLGVWKLL 390 (394)
Q Consensus 376 ~tgs~Dg~I~vWd~~ 390 (394)
++|+.||.|+||++.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 999999999999985
No 29
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.5e-32 Score=254.10 Aligned_cols=223 Identities=21% Similarity=0.304 Sum_probs=198.6
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEEEEecC-------
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLFAGAQD------- 232 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~~------- 232 (394)
+...++.+|.+.|++++|+|++++|++++.|++ |||+.+++.+ .+..+...|.+++|+|+ .+++++.+
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 567899999999999999999999999999999 6999988876 66788899999999998 77777655
Q ss_pred ---------------CCCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCC
Q 016134 233 ---------------GHTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLD 294 (394)
Q Consensus 233 ---------------~h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~D 294 (394)
+|...|.++.|. ++.+++++.|++|++||+++++++.++.+|...|.+++|+ +.+|++++.|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 688899999997 6789999999999999999999999999999999999998 7799999999
Q ss_pred CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC---CcEEEEEECC
Q 016134 295 HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK---HEVRVIEIGP 371 (394)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---~~v~~l~~sp 371 (394)
++|++||++++.....+..|...+..+ .|+|++. +|++++.|++|++||+++++.+..+.+. ..|++++|+|
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~~v~~v----~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHESDINAI----CFFPNGN-AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEE----EECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CcEEEEECCCCeeEEEEcCCcCCEEEE----EEcCCCC-EEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 999999999988888887776544333 4699998 9999999999999999998887777653 3699999999
Q ss_pred CC-EEEEEeCCCeEEEEeCCCC
Q 016134 372 DK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 372 ~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
++ +|++|+.|+.|++||+.+.
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEECCCCeEEEEEcccC
Confidence 99 9999999999999998754
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.5e-32 Score=250.33 Aligned_cols=288 Identities=16% Similarity=0.215 Sum_probs=233.6
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.++++ ++..++.+..+..+.+|+....... ....+|...|.++. ++|++.+++++. +| .|
T Consensus 15 ~~~s~--dg~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~h~~~v~~~~-~~~~~~~l~~~~-dg----~i 74 (337)
T 1gxr_A 15 FHVTA--DGQMQPVPFPPDALIGPGIPRHARQ------------INTLNHGEVVCAVT-ISNPTRHVYTGG-KG----CV 74 (337)
T ss_dssp EEECS--SSCEEECCCCTTSSSSTTCCSEEEE------------EEEECCSSCCCEEE-ECSSSSEEEEEC-BS----EE
T ss_pred EEECC--CCCEEEeecCCCcEeccccCCcccc------------ceeccCCCceEEEE-EecCCcEEEEcC-CC----eE
Confidence 44555 7777777777666666654432211 12347788999999 999999998765 44 99
Q ss_pred EEEEcCCCc--eEEEEec--ccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcE---EEecCCCCcEEEEEEcCC--
Q 016134 156 HSWFCGEGL--TMLAKLE--GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAE---FSLDGPVGEVYSMVVANE-- 224 (394)
Q Consensus 156 ~iWd~~~~~--~~~~~l~--~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~---~~~~~~~~~v~~l~~~~~-- 224 (394)
++||+.++. ..+..+. +|...|.+++|+|++++|++++.|+. +||+++++. ..+..+...+.+++|+++
T Consensus 75 ~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 75 KVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp EEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS
T ss_pred EEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC
Confidence 999997652 2333333 89999999999999999999999998 699998873 256778899999999987
Q ss_pred EEEEEecC------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc
Q 016134 225 MLFAGAQD------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW 284 (394)
Q Consensus 225 ~l~~~~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~ 284 (394)
.+++++.+ .|...|.+++|+ +++|++++.|+.|++||+++++.+..+. +...+.+++|+
T Consensus 155 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s 233 (337)
T 1gxr_A 155 VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYC 233 (337)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEEC
Confidence 77777765 688999999997 6799999999999999999999888875 77889999998
Q ss_pred --CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCC
Q 016134 285 --DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKH 362 (394)
Q Consensus 285 --~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~ 362 (394)
+++|++++.|+.|++||+++.+.. .+..+... +. .+.|+|+++ +|++++.|+.|++||+.+++.+....+..
T Consensus 234 ~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~--v~--~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~ 307 (337)
T 1gxr_A 234 PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESC--VL--SLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSKESS 307 (337)
T ss_dssp TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSC--EE--EEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccc--ee--EEEECCCCC-EEEEecCCCcEEEEECCCCeEEEEecCCC
Confidence 789999999999999999876543 34444433 33 334699999 89999999999999999998887777788
Q ss_pred cEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 363 EVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 363 ~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
.|.+++|+|++ +|++++.||.|++|++.
T Consensus 308 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 308 SVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 99999999999 99999999999999974
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.5e-32 Score=264.63 Aligned_cols=293 Identities=11% Similarity=0.096 Sum_probs=232.9
Q ss_pred CCCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCC
Q 016134 73 KSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDEC 152 (394)
Q Consensus 73 ~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~ 152 (394)
....+|++ ++..+++++.|+++++||+.++.... ...++ .+..+.++++++.++++++.+|
T Consensus 59 ~~~~~~s~--~g~~l~~~~~d~~v~i~d~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~l~~~~~dg--- 119 (420)
T 3vl1_A 59 GKGNTFEK--VGSHLYKARLDGHDFLFNTIIRDGSK------------MLKRA--DYTAVDTAKLQMRRFILGTTEG--- 119 (420)
T ss_dssp CTTCEEEE--EETTEEEEEETTEEEEEECCSEETTT------------TSCSC--CEEEEEEECSSSCEEEEEETTS---
T ss_pred ccceeeee--cCCeEEEEEcCCcEEEEEecccceee------------EEecC--CceEEEEEecCCCEEEEEECCC---
Confidence 34667777 88899999999999999998776542 22233 2333333889999988777666
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEE
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLF 227 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~ 227 (394)
.|++||+.++ +....+.+|...|++++|+|++++|++++.|+. +||+++++.+ .+.+|...|.+++|+++ .++
T Consensus 120 -~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 120 -DIKVLDSNFN-LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp -CEEEECTTSC-EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEE
T ss_pred -CEEEEeCCCc-ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEE
Confidence 9999999877 778888999999999999999999999999998 6999988765 67789999999999988 788
Q ss_pred EEecC---------------------CCCCCEEEEEe---------------------c--CCeEEEEeCCCeEEEEeCC
Q 016134 228 AGAQD---------------------GHTRPVTCLAV---------------------G--RSRLCSGSMDNTIRVWELD 263 (394)
Q Consensus 228 ~~~~~---------------------~h~~~V~~l~~---------------------~--~~~l~sgs~Dg~V~iwd~~ 263 (394)
+++.+ .|...|.++++ + +++|++++.|+.|++||++
T Consensus 198 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred EEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 88877 24555666655 3 5689999999999999999
Q ss_pred CCceeEEEc-CCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCce-eeEeecccCCcceEEEEeeECCCCCcEEEEE
Q 016134 264 TLEPVMTLN-DHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRGN-LEAAYTHKEDNGVLALGGLNDPDGKPVLICA 338 (394)
Q Consensus 264 ~~~~~~~~~-~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sg 338 (394)
+++.+..+. .|...|.+++|+ +. +|++++.|+.|++||+++++. +..+..+.. ..+..+ +.+++. +|+++
T Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~-~~v~~~---~~~~~~-~l~s~ 352 (420)
T 3vl1_A 278 SKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG-TPINNV---YFAAGA-LFVSS 352 (420)
T ss_dssp TCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT-SCEEEE---EEETTE-EEEEE
T ss_pred CCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC-CCceEE---EeCCCC-EEEEe
Confidence 998877775 488899999999 55 999999999999999998754 555554332 223332 245676 89999
Q ss_pred eCCCeEEEEECCCCcee----------EEEecCCcEEEEEECCCCE----EEEEeCCCeEEEEeCCC
Q 016134 339 CNDNTVHLYELPSFMER----------GRIFSKHEVRVIEIGPDKL----FFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 339 s~dg~I~iwd~~~~~~~----------~~~~~~~~v~~l~~sp~~~----l~tgs~Dg~I~vWd~~~ 391 (394)
+.|+.|++|++...... ....+...|.+++|+|++. |++.+.+|.+.+|+++.
T Consensus 353 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 353 GFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp TTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 99999999998874221 2222366799999999874 88889999999999875
No 32
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3e-32 Score=257.96 Aligned_cols=246 Identities=15% Similarity=0.168 Sum_probs=206.4
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.++. |+|++.++++++.|| +|+|||..++ +....+..|...|.+++|+|++.+|++++.|+. +
T Consensus 59 ~l~gH~~~V~~~~-~s~d~~~l~s~s~Dg----~v~vWd~~~~-~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 59 TLKGHGNKVLCMD-WCKDKRRIVSSSQDG----KVIVWDSFTT-NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp EEECCSSCEEEEE-ECTTSSEEEEEETTS----EEEEEETTTC-CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred EecCCCCeEEEEE-ECCCCCEEEEEeCCC----eEEEEECCCC-CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 4568999999999 999999998877666 9999999877 667788899999999999999999999999998 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD 276 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~ 276 (394)
|++......... .... ...+|...|.++.|+ +..|++++.|++|++||+++++++.++.+|..
T Consensus 133 ~~~~~~~~~~~~---~~~~------------~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 133 YPLTFDKNENMA---AKKK------------SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp EECCCCTTCCSG---GGCE------------EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEecccccccc---ccce------------eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 988654211000 0011 111688899999997 56899999999999999999999999999999
Q ss_pred CcEEEEEc----CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 277 APMSLLCW----DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 277 ~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
.|.++.+. +++|++++.|++|++||+++++.+..+..|...+..+ .|+|++. +|++++.|++|++||++..
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v----~~~p~~~-~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSV----RYYPSGD-AFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE----EECTTSS-EEEEEETTSCEEEEETTTT
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEE----EEeCCCC-EEEEEeCCCeEEEEECCCC
Confidence 99999986 4799999999999999999998888877776544333 3699998 9999999999999999998
Q ss_pred ceeEEEec---CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 353 MERGRIFS---KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 353 ~~~~~~~~---~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
..+..+.. ...+.+++|+|++ +|++|+.|+.|++||+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 273 REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKG 316 (354)
T ss_dssp EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCC
Confidence 77766654 2368999999999 9999999999999998654
No 33
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=250.61 Aligned_cols=259 Identities=14% Similarity=0.173 Sum_probs=224.0
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.+++ ++|++.++++++.+| .|++||+.++ +.+..+.+|...|++++|+|++++|++++.|+. +
T Consensus 27 ~l~~h~~~v~~~~-~s~~~~~l~~~~~dg----~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 27 KLTGHERPLTQVK-YNKEGDLLFSCSKDS----SASVWYSLNG-ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEECCSSCEEEEE-ECTTSCEEEEEESSS----CEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred EEEEeeceEEEEE-EcCCCCEEEEEeCCC----EEEEEeCCCc-hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 3568888999999 999999999877666 9999999887 788999999999999999999999999999998 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCC--EEEEEecC----------------------------------CCCC--CEEE
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQD----------------------------------GHTR--PVTC 240 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~~----------------------------------~h~~--~V~~ 240 (394)
||+++++.+....+...+.++.|+++ .++++..+ .|.. .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 99999998866668899999999998 66665433 2333 8999
Q ss_pred EEec--CCeEEEEeCCCeEEEEeCCC-CceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeeccc
Q 016134 241 LAVG--RSRLCSGSMDNTIRVWELDT-LEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK 315 (394)
Q Consensus 241 l~~~--~~~l~sgs~Dg~V~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~ 315 (394)
++|+ +++|++++.|+.|++||+++ .+.+..+..|...|.+++|+ +.+|++++.|+.|++||+++.+.+..+. +.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~ 259 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TD 259 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CC
Confidence 9997 67999999999999999998 78889999999999999998 7899999999999999999888777665 22
Q ss_pred CCcceEEEEeeECCCCCcEEEEEeCCC--------------eEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEe
Q 016134 316 EDNGVLALGGLNDPDGKPVLICACNDN--------------TVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGD 379 (394)
Q Consensus 316 ~~~~~~~~~~~~s~~g~~~l~sgs~dg--------------~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs 379 (394)
..+. ...++|++. ++++++.++ .|++||+.+++.+..+.. ...|++++|+|++ +|++++
T Consensus 260 --~~~~--~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 334 (369)
T 3zwl_B 260 --CPLN--TAVITPLKE-FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG 334 (369)
T ss_dssp --SCEE--EEEECSSSS-EEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred --CCce--eEEecCCCc-eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc
Confidence 2233 334699999 888888887 899999999988888765 6789999999999 999999
Q ss_pred CCCeEEEEeCCC
Q 016134 380 GAGMLGVWKLLA 391 (394)
Q Consensus 380 ~Dg~I~vWd~~~ 391 (394)
.||.|++|+++.
T Consensus 335 ~dg~v~iw~~~~ 346 (369)
T 3zwl_B 335 EDGFIRLHHFEK 346 (369)
T ss_dssp TTSEEEEEEECH
T ss_pred CCCeEEEEECcc
Confidence 999999999864
No 34
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.3e-32 Score=251.20 Aligned_cols=244 Identities=13% Similarity=0.112 Sum_probs=193.5
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCC-ceEEEEecccCCCeEEEEecC--CCCEEEEEeCCCc
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG-LTMLAKLEGHEKAVSGIALPL--RSDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~-~~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~Dg~ 197 (394)
...||...|.+++ |+|++.++++++.++ +|+|||+.+. .+++.++.+|.++|++++|++ ++++|+||+.|++
T Consensus 4 ~~~~h~~~V~~~~-~s~~g~~las~s~D~----~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAV-MDYYGKRMATCSSDK----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp ECCSCSSCEEEEE-ECTTSSEEEEEETTS----CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred eccCCcCceEEEE-ECCCCCEEEEEeCCC----EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 3568888999999 999999999887766 9999999743 367889999999999999986 4899999999999
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCc--eeE
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLE--PVM 269 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~--~~~ 269 (394)
|||+++++...+. ...+|...|.+++|+ +.+|++++.|++|++||+++.. ...
T Consensus 79 v~iWd~~~~~~~~~~-------------------~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 139 (297)
T 2pm7_B 79 VMIWKEENGRWSQIA-------------------VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI 139 (297)
T ss_dssp EEEEEBSSSCBCCCE-------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE
T ss_pred EEEEEcCCCceEEEE-------------------EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee
Confidence 6999876421100 112677888888886 4689999999999999998753 246
Q ss_pred EEcCCCCCcEEEEEcC---------------CEEEEEeCCCcEEEEEeCCCc----eeeEeecccCCcceEEEEeeECCC
Q 016134 270 TLNDHTDAPMSLLCWD---------------QFLLSCSLDHTIKVWFATGRG----NLEAAYTHKEDNGVLALGGLNDPD 330 (394)
Q Consensus 270 ~~~~h~~~v~~l~~~~---------------~~l~s~s~Dg~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~ 330 (394)
.+.+|...|.+++|+. ++|++++.|++|++||++..+ ....+..|...+ . ++.|+|+
T Consensus 140 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V--~--~v~~sp~ 215 (297)
T 2pm7_B 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV--R--DVAWSPT 215 (297)
T ss_dssp EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE--E--EEEECCC
T ss_pred eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce--E--EEEECCC
Confidence 6788999999999983 489999999999999998765 334454554433 3 3346898
Q ss_pred C--CcEEEEEeCCCeEEEEECCCCc--eeEEEe----cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 331 G--KPVLICACNDNTVHLYELPSFM--ERGRIF----SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 331 g--~~~l~sgs~dg~I~iwd~~~~~--~~~~~~----~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ ..+|++++.|++|+|||++... ...... +...|.+++|+|++ +|++++.|+.|+||+...+
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 5 3389999999999999998753 122222 25679999999999 9999999999999998754
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.3e-31 Score=246.71 Aligned_cols=241 Identities=22% Similarity=0.347 Sum_probs=200.9
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.++. ++|++.++++++.+| .|++|+..++ +....+.+|...|.+++|+|++++|++++.|+. +
T Consensus 18 ~~~gh~~~v~~~~-~s~~~~~l~s~~~dg----~i~iw~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~v 91 (312)
T 4ery_A 18 TLAGHTKAVSSVK-FSPNGEWLASSSADK----LIKIWGAYDG-KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKI 91 (312)
T ss_dssp EECCCSSCEEEEE-ECTTSSEEEEEETTS----CEEEEETTTC-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEcccCCcEEEEE-ECCCCCEEEEeeCCC----eEEEEeCCCc-ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEE
Confidence 3568888999999 999999998877666 9999999887 778889999999999999999999999999998 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD 276 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~ 276 (394)
||+++++.+.. ..+|...|.+++|+ +++|++++.|+.|++||+++++++..+..|..
T Consensus 92 wd~~~~~~~~~---------------------~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 92 WDVSSGKCLKT---------------------LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp EETTTCCEEEE---------------------EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EECCCCcEEEE---------------------EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 99998876531 12677788888886 67899999999999999999999999999999
Q ss_pred CcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce
Q 016134 277 APMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME 354 (394)
Q Consensus 277 ~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~ 354 (394)
.|.++.|+ +++|++++.|+.|++||+++++.+..+..... ..+. ...|+|+++ +|++++.|+.|++||+++++.
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 151 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVS--FVKFSPNGK-YILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-CCEE--EEEECTTSS-EEEEEETTTEEEEEETTTTEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-CceE--EEEECCCCC-EEEEEcCCCeEEEEECCCCcE
Confidence 99999998 78999999999999999998877766543322 1222 234799998 899999999999999999988
Q ss_pred eEEEec-CCc---EEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 355 RGRIFS-KHE---VRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 355 ~~~~~~-~~~---v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+..+.. ... +......+++ +|++|+.||.|++||+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 227 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 877764 222 2233333556 9999999999999999865
No 36
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.1e-32 Score=258.89 Aligned_cols=271 Identities=13% Similarity=0.139 Sum_probs=210.8
Q ss_pred CCcccccccc-cccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc-cccccCCCeecCCCC
Q 016134 75 PPSYNRLKNN-LWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV-CCHWLLGNCVRGDEC 152 (394)
Q Consensus 75 ~~~~~~~~~~-~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~ 152 (394)
..+|++ ++ ..+++|+.|+++++||++++...... ...+|...|.++. |+| ++.++++++.++
T Consensus 78 ~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----------~~~~h~~~v~~~~-~~~~~~~~l~s~~~d~--- 141 (383)
T 3ei3_B 78 SLEWHP--THPTTVAVGSKGGDIILWDYDVQNKTSFI----------QGMGPGDAITGMK-FNQFNTNQLFVSSIRG--- 141 (383)
T ss_dssp EEEECS--SCTTEEEEEEBTSCEEEEETTSTTCEEEE----------CCCSTTCBEEEEE-EETTEEEEEEEEETTT---
T ss_pred EEEECC--CCCCEEEEEcCCCeEEEEeCCCcccceee----------ecCCcCCceeEEE-eCCCCCCEEEEEeCCC---
Confidence 344454 55 68999999999999999977653211 2347888999999 999 788888777666
Q ss_pred CeEEEEEcCCCceEEEEecc---cCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEE
Q 016134 153 RFLHSWFCGEGLTMLAKLEG---HEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLF 227 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~---h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~ 227 (394)
.|++||+.+ ..+..+.. |...|.+++|+|++++|++++.|+. +||++......+.
T Consensus 142 -~i~iwd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------------- 201 (383)
T 3ei3_B 142 -ATTLRDFSG--SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK----------------- 201 (383)
T ss_dssp -EEEEEETTS--CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEE-----------------
T ss_pred -EEEEEECCC--CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEec-----------------
Confidence 999999985 34455544 4588999999999999999999999 6999533322322
Q ss_pred EEecCCCCCCEEEEEec--CC-eEEEEeCCCeEEEEeCCC----CceeEEEcCCCCCcEEEEEc---CCEEEEEeCCCcE
Q 016134 228 AGAQDGHTRPVTCLAVG--RS-RLCSGSMDNTIRVWELDT----LEPVMTLNDHTDAPMSLLCW---DQFLLSCSLDHTI 297 (394)
Q Consensus 228 ~~~~~~h~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~----~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~Dg~i 297 (394)
+|...|.+++|+ +. +|++++.|+.|++||+++ ++++..+ .|...|.+++|+ +.+|++++.|+.|
T Consensus 202 -----~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 202 -----LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp -----CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred -----cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 677788888887 44 899999999999999987 6677776 599999999997 5899999999999
Q ss_pred EEEEeCCCceeeEeecccCC-------cce------EEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---C
Q 016134 298 KVWFATGRGNLEAAYTHKED-------NGV------LALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---K 361 (394)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-------~~~------~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~ 361 (394)
++||+++.+....+..+... ... ..+.+.++|+++ + +++.|+.|+|||+.+++.+..+.. .
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~-~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ-L--LLNDKRTIDIYDANSGGLVHQLRDPNAA 352 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT-T--CTTCCCCEEEEETTTCCEEEEECBTTBC
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCcc-c--ccCCCCeEEEEecCCCceeeeecCCCCC
Confidence 99999988776666544321 100 111233566666 3 677899999999999999888874 4
Q ss_pred CcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 362 HEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 362 ~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
..+..++|+|++ +|++++ |+.|++||+++
T Consensus 353 ~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 353 GIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp SCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 457778999999 889997 99999999975
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.5e-33 Score=261.22 Aligned_cols=270 Identities=14% Similarity=0.163 Sum_probs=210.0
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccc----ccccCCCeecCCCCCeEEEEEcC
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVC----CHWLLGNCVRGDECRFLHSWFCG 161 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~----~~~~~~~~~~g~~~~~i~iWd~~ 161 (394)
.+++++.|+.+++|++.++....... ......+...|.++. |+|. +.++++++.+| .|++||+.
T Consensus 36 ~~~~~~~~~~v~vw~~~~~~~~~~~~-------~~~~~~~~~~v~~~~-~~~~~~~~~~~l~~~~~dg----~i~v~d~~ 103 (366)
T 3k26_A 36 LVFATVGSNRVTLYECHSQGEIRLLQ-------SYVDADADENFYTCA-WTYDSNTSHPLLAVAGSRG----IIRIINPI 103 (366)
T ss_dssp EEEEEEETTEEEEEEECGGGCEEEEE-------EEECSCTTCCEEEEE-EEECTTTCCEEEEEEETTC----EEEEECTT
T ss_pred eEEEECCCCEEEEEEcCCCcEEEeee-------eccccCCCCcEEEEE-eccCCCCCCCEEEEecCCC----EEEEEEch
Confidence 35555666699999999765421110 001123556789998 9998 66788777666 99999998
Q ss_pred CCceEEEEecccCCCeEEEEecC-CCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCE
Q 016134 162 EGLTMLAKLEGHEKAVSGIALPL-RSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPV 238 (394)
Q Consensus 162 ~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V 238 (394)
++ +.+..+.+|...|++++|+| ++++|++++.|+. +||+++++.+.... ...+|...|
T Consensus 104 ~~-~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------~~~~~~~~v 164 (366)
T 3k26_A 104 TM-QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG------------------GVEGHRDEV 164 (366)
T ss_dssp TC-CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC------------------STTSCSSCE
T ss_pred hc-eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec------------------ccccccCce
Confidence 87 77889999999999999999 9999999999998 69999887764321 012677888
Q ss_pred EEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE----------------------------cCCCCCcEEEEEcCCEE
Q 016134 239 TCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL----------------------------NDHTDAPMSLLCWDQFL 288 (394)
Q Consensus 239 ~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~----------------------------~~h~~~v~~l~~~~~~l 288 (394)
.+++|+ +++|++++.|+.|++||+++++.+..+ ..|...|.++.|++++|
T Consensus 165 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 244 (366)
T 3k26_A 165 LSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLI 244 (366)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEE
T ss_pred eEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEE
Confidence 888887 678999999999999999976654333 34999999999999999
Q ss_pred EEEeCCCcEEEEEeCCCce--------------eeEeecccCCcceEEEEeeECCC--CCcEEEEEeCCCeEEEEECCCC
Q 016134 289 LSCSLDHTIKVWFATGRGN--------------LEAAYTHKEDNGVLALGGLNDPD--GKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 289 ~s~s~Dg~i~vwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~s~~--g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
++++.|+.|++||+++... +..+..+......+. |+|+ +. +|++++.|+.|++||+.++
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~s~~~~~~-~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR----FSMDFWQK-MLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC----CEECTTSS-EEEEECTTSCEEEEECCSS
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE----EcCCCCCc-EEEEEecCCcEEEEECCCC
Confidence 9999999999999987644 444444444444333 4666 88 9999999999999999987
Q ss_pred cee----EEEec---CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 353 MER----GRIFS---KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 353 ~~~----~~~~~---~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
+.. ..+.. ...|++++|+|++ +|++++.||.|++||+.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 533 24443 4679999999999 999999999999999863
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-31 Score=257.78 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=213.1
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeec
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNI 201 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~ 201 (394)
++...|.++. + ++.++++++.+| .|++||..++ +.+..+.+|...|.+++| ++++|++|+.||. +||+
T Consensus 131 ~~~~~v~~~~-~--d~~~l~~g~~dg----~i~iwd~~~~-~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~ 200 (435)
T 1p22_A 131 ETSKGVYCLQ-Y--DDQKIVSGLRDN----TIKIWDKNTL-ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 200 (435)
T ss_dssp SSCCCEEEEE-C--CSSEEEEEESSS----CEEEEESSSC-CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred CCCCcEEEEE-E--CCCEEEEEeCCC----eEEEEeCCCC-eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEEC
Confidence 4555676665 3 677887776665 9999999887 788999999999999999 7889999999999 6999
Q ss_pred CCCcEE-EecCCCCcEEEEEEcCCEEEEEecC---------------------CCCCCEEEEEecCCeEEEEeCCCeEEE
Q 016134 202 ESSAEF-SLDGPVGEVYSMVVANEMLFAGAQD---------------------GHTRPVTCLAVGRSRLCSGSMDNTIRV 259 (394)
Q Consensus 202 ~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~~---------------------~h~~~V~~l~~~~~~l~sgs~Dg~V~i 259 (394)
++++.+ .+..|...|.++.|+++.+++++.+ +|...|.+++|++++|++|+.|+.|++
T Consensus 201 ~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 201 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV 280 (435)
T ss_dssp SSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEE
T ss_pred CCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEE
Confidence 999877 6778999999999999888888876 688899999999999999999999999
Q ss_pred EeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEe
Q 016134 260 WELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC 339 (394)
Q Consensus 260 wd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs 339 (394)
||+++++++..+.+|...|.++.+.+.+|++++.|+.|++||+++++.+..+..|... +.++. + ++. +|++|+
T Consensus 281 wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~--v~~~~--~--~~~-~l~sg~ 353 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEEL--VRCIR--F--DNK-RIVSGA 353 (435)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEE--C--CSS-EEEEEE
T ss_pred EECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCc--EEEEE--e--cCC-EEEEEe
Confidence 9999999999999999999999999999999999999999999999888888776644 33332 3 566 899999
Q ss_pred CCCeEEEEECCCCc---------eeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 340 NDNTVHLYELPSFM---------ERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 340 ~dg~I~iwd~~~~~---------~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
.||.|++||+.++. .+..+.. ...|++++| ++ +|++++.||.|++||+...+
T Consensus 354 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 354 YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 99999999997654 5555544 667999999 55 99999999999999997654
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.5e-32 Score=257.26 Aligned_cols=232 Identities=22% Similarity=0.284 Sum_probs=198.1
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEEEE
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLFAG 229 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~ 229 (394)
+..|+..+. .+.+++.+|.+.|++++|+|++++|+||+.|++ |||+.+++.. .+..|...|.+++|+|+ .++++
T Consensus 48 ~~~~~~~~~-~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 48 AVSFNPTDL-VCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp CCCCCCCCC-EEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred cccccccee-EEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence 344655544 788999999999999999999999999999999 6999998876 67789999999999998 77777
Q ss_pred ecC-------------------------CCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEE-----cCCCC
Q 016134 230 AQD-------------------------GHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTL-----NDHTD 276 (394)
Q Consensus 230 ~~~-------------------------~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~-----~~h~~ 276 (394)
+.| +|...|.++.|. +..|++|+.|++|++||+++++++..+ .+|..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 644 677888888886 357999999999999999999998887 67999
Q ss_pred CcEEEEEc---CCEEEEEeCCCcEEEEEeCC-CceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 277 APMSLLCW---DQFLLSCSLDHTIKVWFATG-RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 277 ~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
.|.++.+. +.+|++++.|++|++||++. .+.+..+..|...+..++ |+|++. +|++++.|++|+|||++++
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~----~~p~~~-~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK----FFPDGQ-RFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE----ECTTSS-EEEEECSSSCEEEEETTTT
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE----EecCCC-eEEEEcCCCeEEEEECCCC
Confidence 99999996 68999999999999999984 466677777776655444 599998 9999999999999999999
Q ss_pred ceeEEEecC--------CcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 353 MERGRIFSK--------HEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 353 ~~~~~~~~~--------~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+.+..+... ..|++++|+|++ +|++|+.||.|++||+...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 887776541 238999999999 9999999999999998653
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-30 Score=238.45 Aligned_cols=257 Identities=16% Similarity=0.214 Sum_probs=220.2
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
...||...|.++. + +++.++++++.+| .|++||+.++ +....+..|...|.+++|+|++++|++++.|+. +
T Consensus 13 ~l~~h~~~v~~~~-~-~~~~~l~s~~~dg----~v~vw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 85 (313)
T 3odt_A 13 TLKGHDQDVRDVV-A-VDDSKVASVSRDG----TVRLWSKDDQ-WLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMING 85 (313)
T ss_dssp EECCCSSCEEEEE-E-EETTEEEEEETTS----EEEEEEESSS-EEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HhhCCCCCcEEEE-e-cCCCEEEEEEcCC----cEEEEECCCC-EEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEE
Confidence 4578889999998 7 8888888776666 9999999776 788889999999999999999999999999998 5
Q ss_pred eecCCCc----EEEecCCCCcEEEEEEcCCEEEEEecC----------------CCCCCEEEEEec---CCeEEEEeCCC
Q 016134 199 WNIESSA----EFSLDGPVGEVYSMVVANEMLFAGAQD----------------GHTRPVTCLAVG---RSRLCSGSMDN 255 (394)
Q Consensus 199 Wd~~~~~----~~~~~~~~~~v~~l~~~~~~l~~~~~~----------------~h~~~V~~l~~~---~~~l~sgs~Dg 255 (394)
|++.... ...+..|...|.++.|.+..+++++.+ .|...|.++.|. +++|++++.|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred EEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 8876543 336788999999999988888888876 689999999984 78999999999
Q ss_pred eEEEEeCCCCceeEEEcC-CCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCc
Q 016134 256 TIRVWELDTLEPVMTLND-HTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKP 333 (394)
Q Consensus 256 ~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 333 (394)
.|++|| ..+.+..+.. |...|.++.++ ...|++++.|+.|++||+++++.+..+..+......+ .|+|++.
T Consensus 166 ~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~----~~~~~~~- 238 (313)
T 3odt_A 166 TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI----KLLPNGD- 238 (313)
T ss_dssp CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE----EECTTSC-
T ss_pred CEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEE----EEecCCC-
Confidence 999999 4567777777 89999999998 5559999999999999999998888887766543333 3689884
Q ss_pred EEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 334 VLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 334 ~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
|++++.|+.|++||+++++.+..+.. ...|.+++|+|++.+++++.|+.|++|++.+.
T Consensus 239 -l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 239 -IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp -EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred -EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 77899999999999999988887766 55899999999997778999999999999764
No 41
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-31 Score=246.28 Aligned_cols=245 Identities=21% Similarity=0.242 Sum_probs=184.5
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCC-ceEEEEe-cc-cCCCeEEEEecCCCCEEEEEeCCCc
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG-LTMLAKL-EG-HEKAVSGIALPLRSDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~-~~~~~~l-~~-h~~~V~~l~~s~~~~~l~sgs~Dg~ 197 (394)
...||...|.++. +++. ++++++.++ +|++||+..+ .+.+..+ .+ |...|.+++|+|++++|++++.|++
T Consensus 9 ~~~~h~~~v~~~~-~s~~--~las~~~D~----~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 81 (330)
T 2hes_X 9 SLKLYKEKIWSFD-FSQG--ILATGSTDR----KIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDST 81 (330)
T ss_dssp EEECCSSCEEEEE-EETT--EEEEEESSS----CEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeccCCCceeeec-cCCC--EEEEEcCCC----EEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCc
Confidence 3457888999998 8876 666665555 9999999764 3556666 45 9999999999999999999999999
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCC----CceeE
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDT----LEPVM 269 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~----~~~~~ 269 (394)
|||++....... . .-......+|...|.+++|+ +++|++|+.|++|+|||++. .+++.
T Consensus 82 v~iw~~~~~~~~~~---~-----------~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 82 VSIWAKEESADRTF---E-----------MDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp EEEEEC-------C---C-----------CEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred EEEEEcccCcCccc---c-----------ceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 699864321000 0 00011234788899999997 67999999999999999943 35678
Q ss_pred EEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCC--ceeeEeecccCCcceEEEEeeECCC--CCcEEEEEeCCCe
Q 016134 270 TLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGR--GNLEAAYTHKEDNGVLALGGLNDPD--GKPVLICACNDNT 343 (394)
Q Consensus 270 ~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~s~~--g~~~l~sgs~dg~ 343 (394)
.+.+|...|.++.|+ +.+|++++.|++|++||++.+ +++..+..|...+ .+ +.|+|+ +. +|++++.|++
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v--~~--~~~~~~~~~~-~l~s~s~D~~ 222 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTV--WS--SDFDKTEGVF-RLCSGSDDST 222 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCE--EE--EEECCSSSSC-EEEEEETTSC
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcE--EE--EEecCCCCee-EEEEEeCCCe
Confidence 889999999999998 789999999999999999766 4556666665443 32 346887 55 8999999999
Q ss_pred EEEEECCCC--------ceeEEEe--cCCcEEEEEECCCCEEEEEeCCCeEEEEeCCC
Q 016134 344 VHLYELPSF--------MERGRIF--SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 344 I~iwd~~~~--------~~~~~~~--~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
|+|||+... .....+. +...|.+++|+++++|++++.|+.|++|++.+
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEET
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCC
Confidence 999998754 2222332 35679999999888999999999999999764
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.7e-31 Score=250.86 Aligned_cols=232 Identities=13% Similarity=0.121 Sum_probs=183.5
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCC------c--eeecCCCcEE-----EecCCCCcEEEEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG------T--AWNIESSAEF-----SLDGPVGEVYSMV 220 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg------~--vWd~~~~~~~-----~~~~~~~~v~~l~ 220 (394)
....|++... ....|+..|++++|+|||++|++++.|. . +|+..++... ....+...|.+++
T Consensus 27 ~~~~w~~p~~-----~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~ 101 (357)
T 4g56_B 27 KGSAWGRPVT-----APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVA 101 (357)
T ss_dssp ------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEE
T ss_pred cccccCCCCC-----CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEE
Confidence 5677876432 3357999999999999999999999854 3 3555554432 3456788899999
Q ss_pred EcCC-EEEEEecC----------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC
Q 016134 221 VANE-MLFAGAQD----------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275 (394)
Q Consensus 221 ~~~~-~l~~~~~~----------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~ 275 (394)
|+|+ .+++++.+ +|...|.+++|+ +++|++|+.|++|+|||+++++++..+.+|.
T Consensus 102 ~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~ 181 (357)
T 4g56_B 102 WVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS 181 (357)
T ss_dssp EETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC
Confidence 9998 66666665 688999999997 6799999999999999999999999999999
Q ss_pred CCcEEEEEc--C-CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 276 DAPMSLLCW--D-QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 276 ~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
..|.+++|+ + .+|++++.|++|++||+++++....+........+.+ +.|+|++..+|++|+.|+.|++||++++
T Consensus 182 ~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~--v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 182 SEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTS--VTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp SCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEE--EEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred CCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccc--hhhhhcccceEEEeecccceeEEECCCC
Confidence 999999998 3 4899999999999999998877766554443333443 3579987669999999999999999999
Q ss_pred ceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEEEeCCCC
Q 016134 353 MERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 353 ~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~~ 392 (394)
+.+..+.. ...|++++|+|++ +|++++.|++|+|||+++.
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 88887765 6789999999987 7999999999999998764
No 43
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-31 Score=247.47 Aligned_cols=242 Identities=20% Similarity=0.195 Sum_probs=192.1
Q ss_pred cCCCCcc-ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceE--EEEecccCCCeEEEEecCCCCEEEEEeCCCc
Q 016134 121 DESGDKS-TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTM--LAKLEGHEKAVSGIALPLRSDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~-~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~--~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~ 197 (394)
...+|.. .+..++ |+|++.++++++.++ +|+|||+.++... .....+|...|.+++|+|++++|++++.|++
T Consensus 10 ~~~~h~~~~v~~l~-~sp~g~~las~~~D~----~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 10 RVPAHPDSRCWFLA-WNPAGTLLASCGGDR----RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EECCSTTSCEEEEE-ECTTSSCEEEEETTS----CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eecCCCCCcEEEEE-ECCCCCEEEEEcCCC----eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 3457776 888999 999999999887766 9999999776322 2234789999999999999999999999999
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCc---eeEE
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLE---PVMT 270 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~---~~~~ 270 (394)
|||+..+..... ....+|...|.+++|+ +++|++|+.|++|++||+++.+ ++..
T Consensus 85 v~iw~~~~~~~~~~-------------------~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 85 TCIWKKNQDDFECV-------------------TTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EEEEEECCC-EEEE-------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EEEEEccCCCeEEE-------------------EEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 699887643211 1233788888888887 6899999999999999998753 5677
Q ss_pred EcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCce--eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEE
Q 016134 271 LNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGN--LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHL 346 (394)
Q Consensus 271 ~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~i 346 (394)
+..|...|.+++|+ +++|++++.|++|++||++..+. ...+..|... +. .+.|+|+++ +|++++.|++|+|
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~--v~--~l~~sp~g~-~l~s~s~D~~v~i 220 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHEST--VW--SLAFDPSGQ-RLASCSDDRTVRI 220 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSC--EE--EEEECTTSS-EEEEEETTSCEEE
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCc--eE--EEEECCCCC-EEEEEeCCCeEEE
Confidence 88999999999998 78999999999999999987653 3445555443 33 334799998 9999999999999
Q ss_pred EECCCC---------------ceeEEEe--cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 347 YELPSF---------------MERGRIF--SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 347 wd~~~~---------------~~~~~~~--~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
||.... ..+..+. +...|.+++|+|++ .|++++.|+.|++|++..
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECT
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC
Confidence 996322 1222232 35679999999999 999999999999999764
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.8e-30 Score=244.47 Aligned_cols=239 Identities=16% Similarity=0.221 Sum_probs=189.8
Q ss_pred cCCCCccceeeeccc-----cc-cccccCCCeecCCCCCeEEEEEcCCC------ceEEEEecccCCCeEEEEecCCCCE
Q 016134 121 DESGDKSTSKKTTLK-----NV-CCHWLLGNCVRGDECRFLHSWFCGEG------LTMLAKLEGHEKAVSGIALPLRSDK 188 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~-----~~-~~~~~~~~~~~g~~~~~i~iWd~~~~------~~~~~~l~~h~~~V~~l~~s~~~~~ 188 (394)
...||...|.++. + ++ ++.++++++.++ +|++||+.+. ..+...+.+|...|++++|+|++.+
T Consensus 16 ~l~gH~~~V~~~~-~~~s~~~~~d~~~l~sgs~D~----~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 16 ILEGHSDWVTSIV-AGFSQKENEDSPVLISGSRDK----TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEECCSSCEEEEE-ECCCSSTTCCCCEEEEEETTS----CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeccchhhhhhee-eEEEeecCCCCCEEEEEcCCC----EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 4568888999998 6 55 788888776665 9999998643 2567889999999999999999999
Q ss_pred EEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCC
Q 016134 189 LFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDT 264 (394)
Q Consensus 189 l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~ 264 (394)
|++++.|++ |||+++++.+. ...+|...|.+++|+ +++|++++.|++|++||+..
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~---------------------~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYK---------------------RFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEE---------------------EEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred EEEEcCCCcEEEEECCCCcEEE---------------------EEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 999999999 69999987653 112677888888886 67899999999999999984
Q ss_pred CceeEEEc---CCCCCcEEEEEc--C----------CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECC
Q 016134 265 LEPVMTLN---DHTDAPMSLLCW--D----------QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 265 ~~~~~~~~---~h~~~v~~l~~~--~----------~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
+....+. .|...|.++.|+ + .+|++++.|+.|++||. ..+....+..|...+. + +.|+|
T Consensus 150 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~--~--~~~s~ 223 (343)
T 2xzm_R 150 -ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVN--H--LSISP 223 (343)
T ss_dssp -CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEE--E--EEECT
T ss_pred -CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccce--E--EEECC
Confidence 4444443 688999999998 2 68999999999999994 4555555665654333 2 34699
Q ss_pred CCCcEEEEEeCCCeEEEEECCC-CceeEEEecCCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 330 DGKPVLICACNDNTVHLYELPS-FMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 330 ~g~~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+++ +|++++.|+.|+|||+.. ......+...+.|.+++|+|++.+++++.|+.|++|++.+.
T Consensus 224 ~g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 224 NGK-YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQ 286 (343)
T ss_dssp TSS-EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSC
T ss_pred CCC-EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCC
Confidence 999 999999999999999954 34444555677899999999994445667888999998754
No 45
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.5e-31 Score=247.94 Aligned_cols=252 Identities=19% Similarity=0.260 Sum_probs=205.5
Q ss_pred cccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc
Q 016134 85 LWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL 164 (394)
Q Consensus 85 ~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~ 164 (394)
..++|+|.|+++++|++.+..... ........||...|..+. +++++.++++++.++ +|++||+.++
T Consensus 31 ~~l~s~s~D~~v~~W~~~~~~~~~-------~~~~~~~~~h~~~v~~~~-~s~dg~~l~s~s~D~----~v~~wd~~~~- 97 (319)
T 3frx_A 31 NLLLSASRDKTLISWKLTGDDQKF-------GVPVRSFKGHSHIVQDCT-LTADGAYALSASWDK----TLRLWDVATG- 97 (319)
T ss_dssp TEEEEEETTSEEEEEEEEEETTEE-------EEEEEEEECCSSCEEEEE-ECTTSSEEEEEETTS----EEEEEETTTT-
T ss_pred cEEEEecCCccEEEecCCCCCccc-------cccceEEeCCcccEEEEE-ECCCCCEEEEEeCCC----EEEEEECCCC-
Confidence 568999999999999987543210 001113568889999999 999999998877666 9999999988
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC--------EEEEEecC--
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE--------MLFAGAQD-- 232 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~--------~l~~~~~~-- 232 (394)
+.+..+.+|...|.+++|+|++++|++++.|++ +||++......+.+|...|.++.+.|. .+++++.|
T Consensus 98 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~ 177 (319)
T 3frx_A 98 ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKM 177 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSC
T ss_pred CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCE
Confidence 788999999999999999999999999999999 699987766788899999999999874 57777766
Q ss_pred ----------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe
Q 016134 233 ----------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS 292 (394)
Q Consensus 233 ----------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 292 (394)
+|...|.+++|+ +.+|++++.|++|+|||+++++++.++.. ...|.+++|+ +.+|++++
T Consensus 178 i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 178 VKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEEEEEc
Confidence 699999999997 67999999999999999999999999885 4689999999 66777766
Q ss_pred CCCcEEEEEeCCCceeeEeecccC----CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 293 LDHTIKVWFATGRGNLEAAYTHKE----DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 293 ~Dg~i~vwd~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
. ..+++|++.....+..+..... ........++|+|+|+ +|++|+.|+.|+|||+.+.
T Consensus 257 ~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 257 A-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp T-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred C-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-EEEEeecCceEEEEEEeec
Confidence 5 5699999987665555433211 1112233456899999 9999999999999998754
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.3e-30 Score=247.39 Aligned_cols=248 Identities=20% Similarity=0.325 Sum_probs=204.1
Q ss_pred eeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEE--ecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCc
Q 016134 130 KKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAK--LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSA 205 (394)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~--l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~ 205 (394)
..+. |++. ..||.++ |++|+|||..++ ++++. +.+|...|++|+|+|++++|++|+.|+. |||+++++
T Consensus 109 ~~l~-wS~~-n~lAvgl-----d~tV~lWd~~tg-~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 109 NLVD-WSSG-NVLAVAL-----DNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp BCEE-ECTT-SEEEEEE-----TTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred eeEE-ECCC-CEEEEEe-----CCEEEEEECCCC-CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 3445 6653 3455433 449999999987 54544 4578889999999999999999999999 69999998
Q ss_pred EE-EecCCCCcEEEEEEcCCEEEEEecC-------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCC
Q 016134 206 EF-SLDGPVGEVYSMVVANEMLFAGAQD-------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELD 263 (394)
Q Consensus 206 ~~-~~~~~~~~v~~l~~~~~~l~~~~~~-------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~ 263 (394)
.+ .+.+|...+.++.+.+..+++++.+ +|...+..+.+. +.++++++.|+.|+|||..
T Consensus 181 ~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 87 6788999999999998898888876 788999999997 7899999999999999998
Q ss_pred CCc----eeEEEcCCCCCcEEEEEc---CCEEEEE--eCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcE
Q 016134 264 TLE----PVMTLNDHTDAPMSLLCW---DQFLLSC--SLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV 334 (394)
Q Consensus 264 ~~~----~~~~~~~h~~~v~~l~~~---~~~l~s~--s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~ 334 (394)
+++ .+..+..|...|.+++|. ..+++++ +.|++|++||+++++....+..+. .+. ...|++++. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~--~~~~~~~~~-~ 334 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVC--SILWSPHYK-E 334 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEE--EEEEETTTT-E
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---cee--eeeecCCCC-e
Confidence 765 456778899999999998 4566654 479999999999988877766543 223 234688888 4
Q ss_pred EEEE--eCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 335 LICA--CNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 335 l~sg--s~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
|+++ +.|+.|+|||+++++++..+.. ...|++++|+|++ +|+||+.|++|+|||+.+
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 5444 3799999999999999988875 7789999999999 999999999999999865
No 47
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.5e-32 Score=252.65 Aligned_cols=243 Identities=17% Similarity=0.144 Sum_probs=186.3
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecC--CCCEEEEEeCCCc
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPL--RSDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~Dg~ 197 (394)
...||...|.+++ |+|++.++++++.++ +|+|||+.++. .++..+.+|.+.|++++|++ ++++|+||+.|++
T Consensus 8 ~~~~H~~~V~~v~-~s~~g~~lasgs~D~----~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQ-MDYYGTRLATCSSDR----SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp ------CCEEEEE-ECGGGCEEEEEETTT----EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred ecccccCeEEEee-EcCCCCEEEEEeCCC----eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 5678999999999 999999999877666 99999997763 46788999999999999976 4899999999999
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCce---e
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLEP---V 268 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~~---~ 268 (394)
|||+++++.... ....+|...|.+++|+ +.+|++|+.|++|++||+++... .
T Consensus 83 v~iWd~~~~~~~~~-------------------~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 83 VIIWREENGTWEKS-------------------HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp EEEECCSSSCCCEE-------------------EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred EEEEECCCCcceEE-------------------EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence 699987642110 0122677788888886 35799999999999999987532 3
Q ss_pred EEEcCCCCCcEEEEEcC-------------------CEEEEEeCCCcEEEEEeCCCc---eeeEeecccCCcceEEEEee
Q 016134 269 MTLNDHTDAPMSLLCWD-------------------QFLLSCSLDHTIKVWFATGRG---NLEAAYTHKEDNGVLALGGL 326 (394)
Q Consensus 269 ~~~~~h~~~v~~l~~~~-------------------~~l~s~s~Dg~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~~ 326 (394)
..+.+|...|.++.|+. ++|++++.|++|++||++... .+..+..|... +.+ +.
T Consensus 144 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~--V~~--v~ 219 (316)
T 3bg1_A 144 KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW--VRD--VA 219 (316)
T ss_dssp CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC--EEE--EE
T ss_pred eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc--eEE--EE
Confidence 45578999999999872 489999999999999997552 34444445433 333 34
Q ss_pred ECCCC----CcEEEEEeCCCeEEEEECCCCc----eeEE-EecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 327 NDPDG----KPVLICACNDNTVHLYELPSFM----ERGR-IFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 327 ~s~~g----~~~l~sgs~dg~I~iwd~~~~~----~~~~-~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
|+|++ . +|++++.|++|+||++.+.. .... ..+...|.+++|+|++ +|++++.|+.|++|+...+
T Consensus 220 ~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 220 WAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp CCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred ecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 68886 5 89999999999999998631 1112 2246789999999999 9999999999999997643
No 48
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.1e-31 Score=265.17 Aligned_cols=293 Identities=14% Similarity=0.159 Sum_probs=234.9
Q ss_pred CCCCCcccccccccccccCCCCCcccccccCCC----CCCCCCCCCCCccccccCCCCccc-eeeeccccc--cccccCC
Q 016134 72 KKSPPSYNRLKNNLWVSSGSEDRIPHVRNRENP----GYTGPKNSSSASSTVSDESGDKST-SKKTTLKNV--CCHWLLG 144 (394)
Q Consensus 72 ~~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~----~~~~~~~s~~~~~~~~~~~g~~~~-v~~~~~~~~--~~~~~~~ 144 (394)
.....+|++ ++..+++++ |+.+++|+++++ ... ....+|... |.+++ ++| ++.++++
T Consensus 20 ~v~~~~~sp--dg~~l~~~~-~~~v~v~~~~~~~~~~~~~------------~~~~~h~~~~v~~~~-~sp~~~~~~l~s 83 (615)
T 1pgu_A 20 FTTHLSYDP--TTNAIAYPC-GKSAFVRCLDDGDSKVPPV------------VQFTGHGSSVVTTVK-FSPIKGSQYLCS 83 (615)
T ss_dssp CCCCCEEET--TTTEEEEEE-TTEEEEEECCSSCCSSCSE------------EEECTTTTSCEEEEE-ECSSTTCCEEEE
T ss_pred ceeEEEECC--CCCEEEEec-CCeEEEEECCCCCCccccc------------eEEecCCCceEEEEE-ECcCCCCCEEEE
Confidence 345666777 788888877 789999999976 322 145688888 99999 999 9999998
Q ss_pred CeecCCCCCeEEEEEcCCC-------ceEEEEecccCCCeEEEEecCCCCEEEEEeCC----CceeecCCCcEE-EecCC
Q 016134 145 NCVRGDECRFLHSWFCGEG-------LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD----GTAWNIESSAEF-SLDGP 212 (394)
Q Consensus 145 ~~~~g~~~~~i~iWd~~~~-------~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D----g~vWd~~~~~~~-~~~~~ 212 (394)
++.+| .|++||+.++ .+.+..+..|...|.+++|+|++++|++++.+ +.||.++.++.. .+..|
T Consensus 84 ~~~dg----~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 159 (615)
T 1pgu_A 84 GDESG----KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGH 159 (615)
T ss_dssp EETTS----EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSC
T ss_pred ecCCC----EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecC
Confidence 77665 9999999643 47788889999999999999999999999988 455444455554 67889
Q ss_pred CCcEEEEEEcCC---EEEEEecC------------------CCCC---CEEEEEec---CCeEEEEeCCCeEEEEeCCCC
Q 016134 213 VGEVYSMVVANE---MLFAGAQD------------------GHTR---PVTCLAVG---RSRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 213 ~~~v~~l~~~~~---~l~~~~~~------------------~h~~---~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~ 265 (394)
...|.+++|+++ .+++++.+ +|.. .|.+++|+ +++|++++.|+.|++||++++
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999999998 67777766 5888 99999997 458999999999999999999
Q ss_pred ceeEEE-c---CCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC
Q 016134 266 EPVMTL-N---DHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN 340 (394)
Q Consensus 266 ~~~~~~-~---~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~ 340 (394)
+.+..+ . .|...|.++.|+ +.+|++++.|+.|++||+++++.+..+..+............+. ++. +|++++.
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~ 317 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSL 317 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETT-EEEEEET
T ss_pred CEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCC-eEEEEEC
Confidence 999999 6 899999999995 88999999999999999999888877766533222222233343 666 8999999
Q ss_pred CCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCCeEEEEeC
Q 016134 341 DNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 341 dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~ 389 (394)
|+.|++||+.+++.+..+.. ...|++++| |+ |++++.||.|++|++
T Consensus 318 ~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~dg~i~~w~~ 364 (615)
T 1pgu_A 318 DGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYDGRIMEWSS 364 (615)
T ss_dssp TSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETTSCEEETTT
T ss_pred CCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC--cEEECCCCeEEEEEc
Confidence 99999999998777766654 556777777 66 666666666666654
No 49
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-30 Score=249.46 Aligned_cols=259 Identities=11% Similarity=0.056 Sum_probs=219.3
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc-----eEEEEecccCCCeEEEEecCC----C---CE
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL-----TMLAKLEGHEKAVSGIALPLR----S---DK 188 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~-----~~~~~l~~h~~~V~~l~~s~~----~---~~ 188 (394)
...+|...|.+++ |+| .++++++.+| .|++||+.++. +++..+.+|...|++++|+|+ + ++
T Consensus 11 ~~~~h~~~i~~~~-~~~--~~l~s~~~dg----~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 11 AGKAHDADIFSVS-ACN--SFTVSCSGDG----YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp ESSCSSSCEEEEE-ECS--SEEEEEETTS----EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhcCeEEEE-ecC--CeEEEEcCCC----EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 4668889999999 888 6676666555 99999998763 367888899999999999999 9 99
Q ss_pred EEEEeCCCc--eeecCCCc------EEEecCC-----CCcEEEEEEc----CC--E-EEEEecC---------C------
Q 016134 189 LFSGSRDGT--AWNIESSA------EFSLDGP-----VGEVYSMVVA----NE--M-LFAGAQD---------G------ 233 (394)
Q Consensus 189 l~sgs~Dg~--vWd~~~~~------~~~~~~~-----~~~v~~l~~~----~~--~-l~~~~~~---------~------ 233 (394)
|++++.|+. +||+.+++ ...+..+ ...|.+++|+ ++ . +++++.+ .
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 999999998 69999887 4466677 5899999999 76 6 8887655 1
Q ss_pred ---------------------CCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcC---C---CCCcEEEEEc
Q 016134 234 ---------------------HTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLND---H---TDAPMSLLCW 284 (394)
Q Consensus 234 ---------------------h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~---h---~~~v~~l~~~ 284 (394)
|...|.+++|+ + +|++++.|+.|++||+++++++..+.. | ...|.+++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 45668889997 5 999999999999999999999999998 9 9999999998
Q ss_pred --CCEEEEEeCC---CcEEEEEeCCCceeeEeec-------------ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEE
Q 016134 285 --DQFLLSCSLD---HTIKVWFATGRGNLEAAYT-------------HKEDNGVLALGGLNDPDGKPVLICACNDNTVHL 346 (394)
Q Consensus 285 --~~~l~s~s~D---g~i~vwd~~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~i 346 (394)
+.+|++++.| +.|++||+++++.+..+.. +... +.+ +.|+|+++ +|++++.|+.|+|
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~--~~~~~~~~-~l~~~~~dg~i~i 317 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW--VMS--LSFNDSGE-TLCSAGWDGKLRF 317 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC--EEE--EEECSSSS-EEEEEETTSEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc--EEE--EEECCCCC-EEEEEeCCCeEEE
Confidence 7899999999 9999999999888887776 4433 333 34699998 8999999999999
Q ss_pred EECCCCceeEEEe------c----------------CCcEEEEEECCCC-----------EEEEEeCCCeEEEEeCCCC
Q 016134 347 YELPSFMERGRIF------S----------------KHEVRVIEIGPDK-----------LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 347 wd~~~~~~~~~~~------~----------------~~~v~~l~~sp~~-----------~l~tgs~Dg~I~vWd~~~~ 392 (394)
||+++++.+..+. . ...|++++|+|++ +|++++.||.|++|++.+.
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 9999999888887 2 5779999999995 8999999999999998764
No 50
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.1e-30 Score=236.09 Aligned_cols=248 Identities=19% Similarity=0.304 Sum_probs=198.3
Q ss_pred eccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEe--cccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE
Q 016134 132 TTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKL--EGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF 207 (394)
Q Consensus 132 ~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l--~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~ 207 (394)
++ |++.+ .||.+ . |++|+|||+.++ ++++.+ .+|...|++++|+|++++|++|+.|++ |||+++++.+
T Consensus 31 l~-WS~~~-~lAvg-~----D~tV~iWd~~tg-~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 31 VD-WSSGN-VLAVA-L----DNSVYLWSASSG-DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp EE-ECTTS-EEEEE-E----TTEEEEEETTTC-CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EE-ECCCC-EEEEE-e----CCEEEEEECCCC-CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 44 77665 45543 2 459999999887 555554 578889999999999999999999999 6999999887
Q ss_pred -EecCCCCcEEEEEEcCCEEEEEecC-------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCC
Q 016134 208 -SLDGPVGEVYSMVVANEMLFAGAQD-------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 208 -~~~~~~~~v~~l~~~~~~l~~~~~~-------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~ 265 (394)
.+.+|...+.++.+.+..+++++.+ +|...+..+.+. +++|++++.|++|++||++++
T Consensus 103 ~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred EEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 6778999999999988888888766 788899999987 789999999999999999876
Q ss_pred c----eeEEEcCCCCCcEEEEEc---CCEE--EEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEE
Q 016134 266 E----PVMTLNDHTDAPMSLLCW---DQFL--LSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLI 336 (394)
Q Consensus 266 ~----~~~~~~~h~~~v~~l~~~---~~~l--~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~ 336 (394)
+ .......|...|.++.+. ...+ ++++.+++|++||.+......... +.. .+.. ..+++++..+++
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~--~v~~--~~~~~~~~~~~~ 257 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHS--QVCS--ILWSPHYKELIS 257 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSS--CEEE--EEEETTTTEEEE
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-cee--eeee--eeecccccceEE
Confidence 5 345566788899999987 3443 456678999999998776655443 222 2222 235788873333
Q ss_pred E-EeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 337 C-ACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 337 s-gs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ ++.|+.|+|||+++++++..+.. ...|++++|+|++ +|+||+.|++|+|||+.+.
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 2 34799999999999999988875 7789999999999 9999999999999998754
No 51
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-31 Score=252.57 Aligned_cols=284 Identities=14% Similarity=0.148 Sum_probs=225.1
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc-cccccCCCeecCCCCCeEEEEEcCCCceEEEE
Q 016134 91 SEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV-CCHWLLGNCVRGDECRFLHSWFCGEGLTMLAK 169 (394)
Q Consensus 91 s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~ 169 (394)
+.++++++|+++...... ...+|...|.++. ++| ++.++++++.+| .|++||+.++. ....
T Consensus 20 ~~~~~~~v~~~~~~~~~~------------~~~~h~~~v~~~~-~s~~~~~~l~~~~~dg----~i~iw~~~~~~-~~~~ 81 (408)
T 4a11_B 20 RAESTRRVLGLELNKDRD------------VERIHGGGINTLD-IEPVEGRYMLSGGSDG----VIVLYDLENSS-RQSY 81 (408)
T ss_dssp HHHHHHHHHTEEECTTEE------------ECCCCSSCEEEEE-ECTTTCCEEEEEETTS----CEEEEECCCCS-SSSC
T ss_pred eccCcceeeccccCccee------------eeeccCCcEEEEE-EecCCCCEEEEEcCCC----eEEEEECCCCc-ccce
Confidence 457789999998776542 5678999999999 999 999999887766 99999998662 2222
Q ss_pred e-------------cccCCCeEEEEecC-CCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC-----EEEE
Q 016134 170 L-------------EGHEKAVSGIALPL-RSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE-----MLFA 228 (394)
Q Consensus 170 l-------------~~h~~~V~~l~~s~-~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~-----~l~~ 228 (394)
+ .+|...|++++|+| ++.+|++++.|+. +||+.+++......+...+..+.+.+. .+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (408)
T 4a11_B 82 YTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAV 161 (408)
T ss_dssp EEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEE
T ss_pred EeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEE
Confidence 2 36999999999999 7889999999998 699999998877778889999999874 6777
Q ss_pred EecC------------------CCCCCEEEEEec--CC-eEEEEeCCCeEEEEeCCCCc-eeEEE---------------
Q 016134 229 GAQD------------------GHTRPVTCLAVG--RS-RLCSGSMDNTIRVWELDTLE-PVMTL--------------- 271 (394)
Q Consensus 229 ~~~~------------------~h~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~-~~~~~--------------- 271 (394)
++.+ .|...|.+++|+ +. +|++++.|+.|++||+++.+ ++..+
T Consensus 162 ~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred EcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccc
Confidence 7665 689999999998 34 69999999999999998765 45554
Q ss_pred cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEEC
Q 016134 272 NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYEL 349 (394)
Q Consensus 272 ~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~ 349 (394)
..|...|.+++|+ +++|++++.|+.|++||+++++.......+....................+++++.|+.|++||+
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 5688999999998 78999999999999999998776554433221111111111112222225666778999999999
Q ss_pred CCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 350 PSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 350 ~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.+++.+..+.. ...|++++|+|++ +|++++.||.|++|++.+.
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 99999888874 6789999999999 9999999999999999765
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3e-32 Score=264.96 Aligned_cols=270 Identities=13% Similarity=0.126 Sum_probs=201.8
Q ss_pred ccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc-cccccCCCeecCCCCCeEEEEEcCC
Q 016134 84 NLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV-CCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 84 ~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
...+++||.|++|+|||++++...... ...||...|.++. |+| ++.++++++.|| +|++||+.+
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~~~~~----------~~~gH~~~V~~l~-f~p~~~~~l~s~s~D~----~v~iwd~~~ 196 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDKPTFI----------KGIGAGGSITGLK-FNPLNTNQFYASSMEG----TTRLQDFKG 196 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSCCEEE----------CCCSSSCCCCEEE-ECSSCTTEEEEECSSS----CEEEEETTS
T ss_pred CCEEEEEeCCCEEEEEECCCCCceeEE----------EccCCCCCEEEEE-EeCCCCCEEEEEeCCC----EEEEeeccC
Confidence 346889999999999999977643211 3568999999999 997 577887666555 999999976
Q ss_pred CceEEEEe--cccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCE
Q 016134 163 GLTMLAKL--EGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPV 238 (394)
Q Consensus 163 ~~~~~~~l--~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V 238 (394)
+ ...... ..+...+.+++|+|++++|++|+.|+. +||++......+ .+|...|
T Consensus 197 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~----------------------~~h~~~v 253 (435)
T 4e54_B 197 N-ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNL----------------------RMHKKKV 253 (435)
T ss_dssp C-EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCS----------------------BCCSSCE
T ss_pred C-ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEE----------------------ecccceE
Confidence 5 332222 234456889999999999999999999 699876543332 2677788
Q ss_pred EEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEE---cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeE
Q 016134 239 TCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTL---NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 239 ~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~---~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
.+++|+ ..+|++++.|++|+|||+++.+....+ .+|...|++++|+ +.+|++++.|++|+|||++++.....
T Consensus 254 ~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 254 THVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp EEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred EeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 888886 347889999999999999886654333 5699999999998 78999999999999999998887776
Q ss_pred eecccCCc--ceEEEEeeECCCCCcEEEEEe------------CCCeEEEEECCCCceeEEEec--CCcEEEE-EECCCC
Q 016134 311 AYTHKEDN--GVLALGGLNDPDGKPVLICAC------------NDNTVHLYELPSFMERGRIFS--KHEVRVI-EIGPDK 373 (394)
Q Consensus 311 ~~~~~~~~--~~~~~~~~~s~~g~~~l~sgs------------~dg~I~iwd~~~~~~~~~~~~--~~~v~~l-~~sp~~ 373 (394)
+..+.... ....+...|+|++. +++++. .++.|++||..+++.+..+.. ...|.++ +|+|++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg 412 (435)
T 4e54_B 334 LIPHPHRHFQHLTPIKAAWHPRYN-LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG 412 (435)
T ss_dssp ECCCCCCCCSSSCCCBCEECSSSS-CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS
T ss_pred EecccccccccceeEEEEEcCCCC-EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC
Confidence 65544321 11222334566666 444442 346899999999998888764 4557776 699999
Q ss_pred -EEEEEeCCCeEEEEeCCCCC
Q 016134 374 -LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 374 -~l~tgs~Dg~I~vWd~~~~~ 393 (394)
+|++|+ |+.|+||++++..
T Consensus 413 ~~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 413 DTLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp SCEEEEC-SSEEEECCCC---
T ss_pred CEEEEEc-CCcEEEEECCcCe
Confidence 777765 8899999998753
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=6.5e-31 Score=248.48 Aligned_cols=256 Identities=13% Similarity=0.056 Sum_probs=213.5
Q ss_pred CccceeeeccccccccccCCCeecCCCCCeEEEEEcCCC-ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeec
Q 016134 125 DKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG-LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNI 201 (394)
Q Consensus 125 ~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~ 201 (394)
|...|.++. ++|++.++++++.++ .|++||+.++ .+.+..+.+|...|++++|+|++++|++++.|+. +||+
T Consensus 7 ~~~~i~~~~-~s~~~~~l~~~~~d~----~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 7 LVEPISCHA-WNKDRTQIAICPNNH----EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp CSSCCCEEE-ECTTSSEEEEECSSS----EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred cCCCeEEEE-ECCCCCEEEEEeCCC----EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence 556888998 999999998776555 9999999876 2388899999999999999999999999999998 6999
Q ss_pred CCCcEE---EecCCCCcEEEEEEcCC--EEEEEecC----------------------CCCCCEEEEEec--CCeEEEEe
Q 016134 202 ESSAEF---SLDGPVGEVYSMVVANE--MLFAGAQD----------------------GHTRPVTCLAVG--RSRLCSGS 252 (394)
Q Consensus 202 ~~~~~~---~~~~~~~~v~~l~~~~~--~l~~~~~~----------------------~h~~~V~~l~~~--~~~l~sgs 252 (394)
++++.. .+..+...|.+++|+++ .+++++.+ .|...|.+++|+ +++|++++
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS 161 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEc
Confidence 988743 44678899999999987 77777765 578899999997 67899999
Q ss_pred CCCeEEEEeC------------------CCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEee
Q 016134 253 MDNTIRVWEL------------------DTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAY 312 (394)
Q Consensus 253 ~Dg~V~iwd~------------------~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 312 (394)
.|+.|++||+ ..++++..+..|...|.+++|+ +++|++++.|+.|++||+++++.+..+.
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 9999999995 4678889999999999999998 7799999999999999999998888887
Q ss_pred cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC--Cce--------------------------------e---
Q 016134 313 THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS--FME--------------------------------R--- 355 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~--~~~--------------------------------~--- 355 (394)
.+......+ .|+|++. +|+++ .|+.|++|++.+ ++. .
T Consensus 242 ~~~~~v~~~----~~~~~~~-~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (372)
T 1k8k_C 242 SETLPLLAV----TFITESS-LVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA 315 (372)
T ss_dssp CSSCCEEEE----EEEETTE-EEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC------
T ss_pred cCCCCeEEE----EEecCCC-EEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCc
Confidence 665443333 3588887 77777 899999999987 320 0
Q ss_pred ---EEE--ecCCcEEEEEEC-CC----CEEEEEeCCCeEEEEeCCC
Q 016134 356 ---GRI--FSKHEVRVIEIG-PD----KLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 356 ---~~~--~~~~~v~~l~~s-p~----~~l~tgs~Dg~I~vWd~~~ 391 (394)
..+ .+...|++++|. ++ .+|++++.||.|++|++.+
T Consensus 316 ~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 316 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 112 236679999966 56 4999999999999999864
No 54
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-32 Score=257.39 Aligned_cols=272 Identities=10% Similarity=0.036 Sum_probs=202.5
Q ss_pred CCCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCC
Q 016134 73 KSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDEC 152 (394)
Q Consensus 73 ~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~ 152 (394)
-...+|++ ++..+++++.|+++++||++++.+.... ...+|...|.++. |+|++.++++++.++
T Consensus 14 v~~~~~s~--~g~~l~~~~~d~~i~iw~~~~~~~~~~~----------~~~~h~~~v~~~~-~s~~~~~l~s~s~d~--- 77 (377)
T 3dwl_C 14 SYEHAFNS--QRTEFVTTTATNQVELYEQDGNGWKHAR----------TFSDHDKIVTCVD-WAPKSNRIVTCSQDR--- 77 (377)
T ss_dssp CSCCEECS--SSSEEECCCSSSCBCEEEEETTEEEECC----------CBCCCSSCEEEEE-ECTTTCCEEEEETTS---
T ss_pred EEEEEECC--CCCEEEEecCCCEEEEEEccCCceEEEE----------EEecCCceEEEEE-EeCCCCEEEEEeCCC---
Confidence 35566777 8889999999999999999987321111 4568888999999 999999998777665
Q ss_pred CeEEEEEcCCCc--eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcE----EEecCCCCcEEEEEEcCC
Q 016134 153 RFLHSWFCGEGL--TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAE----FSLDGPVGEVYSMVVANE 224 (394)
Q Consensus 153 ~~i~iWd~~~~~--~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~----~~~~~~~~~v~~l~~~~~ 224 (394)
.|++||+.++. .....+.+|...|++++|+|++++|++++.|+. +||+++++. ..+..
T Consensus 78 -~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~------------- 143 (377)
T 3dwl_C 78 -NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR------------- 143 (377)
T ss_dssp -SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-------------
T ss_pred -eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-------------
Confidence 99999998762 367788899999999999999999999999998 699988763 12211
Q ss_pred EEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCC------------------CCceeEEEcCCCCCcEEEEEc
Q 016134 225 MLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELD------------------TLEPVMTLNDHTDAPMSLLCW 284 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~------------------~~~~~~~~~~h~~~v~~l~~~ 284 (394)
.|...|.+++|+ +++|++++.|++|++||++ .++++..+ .|...|.+++|+
T Consensus 144 --------~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s 214 (377)
T 3dwl_C 144 --------PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS 214 (377)
T ss_dssp --------SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC
T ss_pred --------ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC
Confidence 277888888887 5789999999999999985 34566666 899999999998
Q ss_pred --CCEEEEEeCCCcEEEEEeCCCce----eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc-----
Q 016134 285 --DQFLLSCSLDHTIKVWFATGRGN----LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM----- 353 (394)
Q Consensus 285 --~~~l~s~s~Dg~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~----- 353 (394)
+++|++++.|+.|++||+++++. +..+..|..... .+.|+|+++ +|++++.++.+ +|+.....
T Consensus 215 p~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~----~~~~s~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~ 288 (377)
T 3dwl_C 215 PSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLR----SLLWANESA-IVAAGYNYSPI-LLQGNESGWAHTR 288 (377)
T ss_dssp TTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEE----EEEEEETTE-EEEEESSSSEE-EECCCC---CCSB
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceE----EEEEcCCCC-EEEEEcCCcEE-EEEeCCCceEEEe
Confidence 78999999999999999998877 555555554333 234689998 88888766655 66654211
Q ss_pred ---------------------e-e---------EEE-----------------ecCCcEEEEEECCCC-----EEEEEeC
Q 016134 354 ---------------------E-R---------GRI-----------------FSKHEVRVIEIGPDK-----LFFTGDG 380 (394)
Q Consensus 354 ---------------------~-~---------~~~-----------------~~~~~v~~l~~sp~~-----~l~tgs~ 380 (394)
. . ..+ .|...|+++++.+.. .|+|++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~ 368 (377)
T 3dwl_C 289 DLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGT 368 (377)
T ss_dssp CCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEET
T ss_pred eecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecC
Confidence 0 0 000 045679999977654 6999999
Q ss_pred CCeEEEEeC
Q 016134 381 AGMLGVWKL 389 (394)
Q Consensus 381 Dg~I~vWd~ 389 (394)
||.|++||+
T Consensus 369 Dg~i~iWdl 377 (377)
T 3dwl_C 369 DGRVVLWTL 377 (377)
T ss_dssp TSEEEEECC
T ss_pred CCcEEEecC
Confidence 999999986
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.7e-30 Score=249.30 Aligned_cols=254 Identities=23% Similarity=0.395 Sum_probs=219.0
Q ss_pred CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--ee
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AW 199 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vW 199 (394)
..||...+.. . +++++.++++++.+| .|++||+.++ +.+..+.+|...|.+++|+ +++|++++.|+. +|
T Consensus 114 l~~h~~~v~~-~-~~~~g~~l~sg~~dg----~i~vwd~~~~-~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 114 LKGHDDHVIT-C-LQFCGNRIVSGSDDN----TLKVWSAVTG-KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVW 184 (445)
T ss_dssp EECSTTSCEE-E-EEEETTEEEEEETTS----CEEEEETTTC-CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred ecccCCCcEE-E-EEEcCCEEEEEECCC----cEEEEECCCC-cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEE
Confidence 4566655432 2 556688888776665 9999999887 7889999999999999997 679999999999 69
Q ss_pred ecCCCcEE-EecCCCCcEEEEEEcCCEEEEEecC------------------CCCCCEEEEEecCCeEEEEeCCCeEEEE
Q 016134 200 NIESSAEF-SLDGPVGEVYSMVVANEMLFAGAQD------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVW 260 (394)
Q Consensus 200 d~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~~------------------~h~~~V~~l~~~~~~l~sgs~Dg~V~iw 260 (394)
|+++++.. .+.+|...|.++.+.++.+++++.+ +|...|.++.++++++++++.|+.|++|
T Consensus 185 d~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 185 NAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEE
T ss_pred ECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEE
Confidence 99999877 6778999999999999899988877 6899999999999999999999999999
Q ss_pred eCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC
Q 016134 261 ELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN 340 (394)
Q Consensus 261 d~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~ 340 (394)
|+++++++.++.+|...|.++.+.+.+|++++.|+.|++||+++++.+..+..+.... .++ .+++. +|++++.
T Consensus 265 d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v--~~~----~~~~~-~l~~~~~ 337 (445)
T 2ovr_B 265 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT--SGM----ELKDN-ILVSGNA 337 (445)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE--EEE----EEETT-EEEEEET
T ss_pred ECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE--EEE----EEeCC-EEEEEeC
Confidence 9999999999999999999999999999999999999999999998888877665433 333 23455 8999999
Q ss_pred CCeEEEEECCCCceeEEEe----cCCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 341 DNTVHLYELPSFMERGRIF----SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 341 dg~I~iwd~~~~~~~~~~~----~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
|+.|++||+++++.+..+. +...|++++|++ .+|++++.||.|++||+.+.
T Consensus 338 dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 338 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS-SEEEEEETTSEEEEEETTTC
T ss_pred CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCCC
Confidence 9999999999999888886 356799999964 39999999999999999865
No 56
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4e-30 Score=246.75 Aligned_cols=235 Identities=20% Similarity=0.318 Sum_probs=188.3
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCC------------------CeEEEEecCC
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEK------------------AVSGIALPLR 185 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~------------------~V~~l~~s~~ 185 (394)
+|...|.+++ |+|++.++++++ + +.+++|++.++ +.+..+..|.. .|++++|+|+
T Consensus 62 ~h~~~V~~v~-fspdg~~la~g~-~----~~v~i~~~~~g-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 62 DHTSVVCCVK-FSNDGEYLATGC-N----KTTQVYRVSDG-SLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp ECSSCCCEEE-ECTTSSEEEEEC-B----SCEEEEETTTC-CEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCEEEEEE-ECCCCCEEEEEc-C----CcEEEEEecCC-CEEEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 5778999999 999999998765 2 48999999887 66667766542 4999999999
Q ss_pred CCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEe
Q 016134 186 SDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWE 261 (394)
Q Consensus 186 ~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd 261 (394)
+++|++|+.|+. |||+++++.+. ...+|...|.+++|+ +++|++++.|++|++||
T Consensus 135 g~~l~s~~~d~~i~iwd~~~~~~~~---------------------~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 135 GKFLATGAEDRLIRIWDIENRKIVM---------------------ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEE---------------------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEE---------------------EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEE
Confidence 999999999999 69999887653 122677888888886 67899999999999999
Q ss_pred CCCCceeEEEcCCCCCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceeeEee-------cccCCcceEEEEeeECCCC
Q 016134 262 LDTLEPVMTLNDHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLEAAY-------THKEDNGVLALGGLNDPDG 331 (394)
Q Consensus 262 ~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~g 331 (394)
++++++...+. +...+.+++++ +.+|++++.|+.|++||++++..+..+. .|.. .+. ++.|+|++
T Consensus 194 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~--~v~--~v~~~~~g 268 (393)
T 1erj_A 194 LRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD--SVY--SVVFTRDG 268 (393)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS--CEE--EEEECTTS
T ss_pred CCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC--CEE--EEEECCCC
Confidence 99999888876 56789999987 6799999999999999999887766553 2222 233 34579999
Q ss_pred CcEEEEEeCCCeEEEEECCCCce------------eEEEe-cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 332 KPVLICACNDNTVHLYELPSFME------------RGRIF-SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 332 ~~~l~sgs~dg~I~iwd~~~~~~------------~~~~~-~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ +|++++.|++|++||+++... ...+. +...|.+++|+|++ +|++|+.|+.|++||+.+.
T Consensus 269 ~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 269 Q-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp S-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred C-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 8 899999999999999986432 22232 36679999999999 9999999999999998764
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.8e-30 Score=283.04 Aligned_cols=293 Identities=15% Similarity=0.190 Sum_probs=244.9
Q ss_pred CCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCe
Q 016134 75 PPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 154 (394)
..+|++ ++..+++|+.|++|++||+.++.... ...+|...|.+++ |+|++.++++++.++ .
T Consensus 620 ~~~~s~--~~~~l~s~~~d~~i~vw~~~~~~~~~------------~~~~h~~~v~~~~-~s~~~~~l~s~~~d~----~ 680 (1249)
T 3sfz_A 620 HACFSQ--DGQRIASCGADKTLQVFKAETGEKLL------------DIKAHEDEVLCCA-FSSDDSYIATCSADK----K 680 (1249)
T ss_dssp EEEECT--TSSEEEEEETTSCEEEEETTTCCEEE------------EECCCSSCEEEEE-ECTTSSEEEEEETTS----E
T ss_pred EEEECC--CCCEEEEEeCCCeEEEEECCCCCEEE------------EeccCCCCEEEEE-EecCCCEEEEEeCCC----e
Confidence 345666 88899999999999999999877532 3458888999999 999999999877665 9
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecC--CCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEE
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPL--RSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLF 227 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~ 227 (394)
|+|||+.++ +.+..+.+|...|.+++|+| ++.++++++.|+. +||+++++.. .+.+|...|.+++|+|+ .++
T Consensus 681 v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 759 (1249)
T 3sfz_A 681 VKIWDSATG-KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLA 759 (1249)
T ss_dssp EEEEETTTC-CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred EEEEECCCC-ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEE
Confidence 999999987 88899999999999999999 5568999999998 6999999877 67889999999999998 777
Q ss_pred EEecC-------------------------------------------------------------------------CC
Q 016134 228 AGAQD-------------------------------------------------------------------------GH 234 (394)
Q Consensus 228 ~~~~~-------------------------------------------------------------------------~h 234 (394)
+++.+ +|
T Consensus 760 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 760 SCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp EEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 77665 34
Q ss_pred CCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCC-----
Q 016134 235 TRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGR----- 305 (394)
Q Consensus 235 ~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~----- 305 (394)
...|.+++|+ +.++++++.|+.|++||+.+++.+..+.+|...|.+++|+ +.+|++++.|+.|++||+...
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~ 919 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSA 919 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCS
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeee
Confidence 5667788887 6789999999999999999999999999999999999998 789999999999999986421
Q ss_pred --------------------------------------------------------------------------ceeeEe
Q 016134 306 --------------------------------------------------------------------------GNLEAA 311 (394)
Q Consensus 306 --------------------------------------------------------------------------~~~~~~ 311 (394)
+....+
T Consensus 920 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~ 999 (1249)
T 3sfz_A 920 IVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSG 999 (1249)
T ss_dssp SSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEEC
T ss_pred ecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeec
Confidence 011111
Q ss_pred ecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCCEEEEEeCCCeEEEEeCCC
Q 016134 312 YTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
..|...+. .+.|+|+++ +|++++.|+.|++||+.+++......+...|.+++|+|++.+++++.|+.|++||+.+
T Consensus 1000 ~~h~~~v~----~l~~s~dg~-~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~ 1074 (1249)
T 3sfz_A 1000 VGHKKAVR----HIQFTADGK-TLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVIT 1074 (1249)
T ss_dssp CCCSSCCC----CEEECSSSS-CEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTT
T ss_pred ccCCCceE----EEEECCCCC-EEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCC
Confidence 11222222 234689998 8999999999999999999877666667889999999999999999999999999876
Q ss_pred C
Q 016134 392 K 392 (394)
Q Consensus 392 ~ 392 (394)
.
T Consensus 1075 ~ 1075 (1249)
T 3sfz_A 1075 G 1075 (1249)
T ss_dssp T
T ss_pred C
Confidence 4
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.1e-29 Score=244.00 Aligned_cols=244 Identities=19% Similarity=0.308 Sum_probs=202.5
Q ss_pred ccccCCCeecCCCCCeEEEEEcCCCceEEEEecc-cCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCC
Q 016134 139 CHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEG-HEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVG 214 (394)
Q Consensus 139 ~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~ 214 (394)
...+++++.++ .|++||+.++ +....+.. |...|++++|+|++++|++++.|+. +||+++++.+ .+..|..
T Consensus 103 ~~~l~~~~~d~----~v~lw~~~~~-~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 177 (401)
T 4aez_A 103 NLNVVAVALER----NVYVWNADSG-SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA 177 (401)
T ss_dssp TTSEEEEEETT----EEEEEETTTC-CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred CCCEEEEECCC----eEEEeeCCCC-cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC
Confidence 34555555554 9999999888 44444444 8999999999999999999999998 6999998876 6678999
Q ss_pred cEEEEEEcCCEEEEEecC-------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcC
Q 016134 215 EVYSMVVANEMLFAGAQD-------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLND 273 (394)
Q Consensus 215 ~v~~l~~~~~~l~~~~~~-------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~ 273 (394)
.|.++.|.+..+++++.+ +|...|.+++|+ +.+|++++.|+.|++||+++++++..+..
T Consensus 178 ~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~ 257 (401)
T 4aez_A 178 RVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN 257 (401)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC
T ss_pred ceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC
Confidence 999999988888888876 689999999997 67999999999999999999999999999
Q ss_pred CCCCcEEEEEc---CCEEEEEe--CCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEE--EeCCCeEEE
Q 016134 274 HTDAPMSLLCW---DQFLLSCS--LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLIC--ACNDNTVHL 346 (394)
Q Consensus 274 h~~~v~~l~~~---~~~l~s~s--~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~s--gs~dg~I~i 346 (394)
|...|.+++|+ ..++++++ .|+.|++||+++++.+..+.. . ..+. .+.|+|++. +|++ |+.|+.|+|
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~-~--~~v~--~~~~s~~~~-~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA-G--SQVT--SLIWSPHSK-EIMSTHGFPDNNLSI 331 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC-S--SCEE--EEEECSSSS-EEEEEECTTTCEEEE
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC-C--CcEE--EEEECCCCC-eEEEEeecCCCcEEE
Confidence 99999999998 35777765 799999999998887776643 2 2233 335799999 6776 448999999
Q ss_pred EECCCCceeEEEe---cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 347 YELPSFMERGRIF---SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 347 wd~~~~~~~~~~~---~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
||+.++....... +...|.+++|+|++ +|++++.||.|++|++.+..
T Consensus 332 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 332 WSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred EecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999876554432 36689999999999 99999999999999998653
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.8e-31 Score=257.53 Aligned_cols=255 Identities=11% Similarity=0.134 Sum_probs=203.8
Q ss_pred cCCCCccceeeeccccc-cccccCCCeecCCCCCeEEEEEcCC---Cc--eEEEEecccCCCeEEEEecCCCCEEEEEeC
Q 016134 121 DESGDKSTSKKTTLKNV-CCHWLLGNCVRGDECRFLHSWFCGE---GL--TMLAKLEGHEKAVSGIALPLRSDKLFSGSR 194 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~~~i~iWd~~~---~~--~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~ 194 (394)
...+|...|.+++ ++| ++.++++++.+| +|+|||+.+ +. +....+ +|...|++++|+|++++|++++.
T Consensus 58 ~~~~h~~~V~~~~-~s~~~~~~l~s~s~dg----~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 58 LMENEPNSITSSA-VSPGETPYLITGSDQG----VIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp ECTTTTSCEEEEE-EECSSSCEEEEEETTS----EEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCCCceEEEE-ECCCCCCEEEEecCCc----eEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeC
Confidence 3478889999999 999 999999887666 999999865 31 223333 59999999999999999999999
Q ss_pred CCc--eeecC---CCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCC
Q 016134 195 DGT--AWNIE---SSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 195 Dg~--vWd~~---~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~ 265 (394)
|+. +||++ +++........ .+..+.+.++ ++...+.++.+. +.+|++++.|+.|++||++++
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 202 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCE-CIRKINLKNF--------GKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL 202 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEE-EEEEEEGGGG--------SSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEEeccccCCceeeccccc-eeEEEEccCc--------ccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Confidence 999 69995 55554322111 5555555432 367778888853 678999999999999999999
Q ss_pred ceeEEEcC--CCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEee-cccCCcceEEEEeeECCCCCcEEEEEeC
Q 016134 266 EPVMTLND--HTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAY-THKEDNGVLALGGLNDPDGKPVLICACN 340 (394)
Q Consensus 266 ~~~~~~~~--h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~g~~~l~sgs~ 340 (394)
+++..+.. |...|++++|+ +.+|++++.|+.|++||+++++.+..+. .+...+..+.+...|++++. +|++++.
T Consensus 203 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~ 281 (437)
T 3gre_A 203 ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSV-IVVGGSS 281 (437)
T ss_dssp CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEE-EEEEEST
T ss_pred eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCcc-EEEEEcC
Confidence 99999988 88999999998 7899999999999999999988777664 44433334433334567777 8999999
Q ss_pred CCeEEEEECCCCceeEEEe---------------------------cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 341 DNTVHLYELPSFMERGRIF---------------------------SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 341 dg~I~iwd~~~~~~~~~~~---------------------------~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
|+.|+|||+++++.+..+. +...|++++|+ ++ +|++++.|+.|++||+.+.
T Consensus 282 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCG
T ss_pred CCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCc
Confidence 9999999999998877766 23348899999 66 9999999999999998764
No 60
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.6e-30 Score=249.76 Aligned_cols=271 Identities=18% Similarity=0.231 Sum_probs=209.2
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc-cccccCCCeecCCCCCeEEEEEcCCCc
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV-CCHWLLGNCVRGDECRFLHSWFCGEGL 164 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~~~i~iWd~~~~~ 164 (394)
.+++++.|+.|+||+++........ .....||...|.++. |+| .+.++++++.+| .|+|||+.++.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~--------~~~~~~h~~~V~~~~-~~p~~~~~l~s~s~dg----~v~vw~~~~~~ 115 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKN--------VPLVCGHTAPVLDIA-WCPHNDNVIASGSEDC----TVMVWEIPDGG 115 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTT--------CCCBCCCSSCEEEEE-ECTTCTTEEEEEETTS----EEEEEECCTTC
T ss_pred EEEEEcCCCEEEEEECccCCCCCCC--------CceEecCCCCEEEEE-eCCCCCCEEEEEeCCC----eEEEEEccCCC
Confidence 3456888999999999754321100 114578999999999 999 889998877666 99999997763
Q ss_pred ------eEEEEecccCCCeEEEEecCCC-CEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCC
Q 016134 165 ------TMLAKLEGHEKAVSGIALPLRS-DKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHT 235 (394)
Q Consensus 165 ------~~~~~l~~h~~~V~~l~~s~~~-~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~ 235 (394)
+++..+.+|...|++++|+|++ ++|++++.|+. |||+++++...... ...|.
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------------~~~~~ 176 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-------------------PDVHP 176 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-------------------TTTCC
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-------------------cCCCC
Confidence 5678899999999999999998 69999999998 69999987653210 02677
Q ss_pred CCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE-cCCCCC-cEEEEEc--CCEEEEE---eCCCcEEEEEeCCCc
Q 016134 236 RPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL-NDHTDA-PMSLLCW--DQFLLSC---SLDHTIKVWFATGRG 306 (394)
Q Consensus 236 ~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~h~~~-v~~l~~~--~~~l~s~---s~Dg~i~vwd~~~~~ 306 (394)
..|.+++|+ +++|++++.|+.|++||+++++++..+ ..|... +.++.|+ +.+|+++ +.|+.|++||+++.+
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 888888886 678999999999999999999999998 788776 8899998 6678887 689999999998866
Q ss_pred eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce-eE---EEecCCcEEEEEECCCC-EEEEEeCC
Q 016134 307 NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME-RG---RIFSKHEVRVIEIGPDK-LFFTGDGA 381 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~-~~---~~~~~~~v~~l~~sp~~-~l~tgs~D 381 (394)
.............+.. ..|+|+++.++++++.|+.|++||+.+++. +. .+.+...|.+++|+|++ ++++ .+
T Consensus 257 ~~~~~~~~~~~~~v~~--~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~ 332 (402)
T 2aq5_A 257 EPLSLQELDTSSGVLL--PFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KC 332 (402)
T ss_dssp SCSEEEECCCCSSCEE--EEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GT
T ss_pred CCceEEeccCCCceeE--EEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cc
Confidence 5322222222223333 347999994445677899999999998873 22 23335789999999999 6553 56
Q ss_pred CeEEEEeCCCC
Q 016134 382 GMLGVWKLLAK 392 (394)
Q Consensus 382 g~I~vWd~~~~ 392 (394)
+.+++|++.+.
T Consensus 333 ~~~~~~~l~~~ 343 (402)
T 2aq5_A 333 EIARFYKLHER 343 (402)
T ss_dssp EEEEEEEEETT
T ss_pred eeEEEEEcCCC
Confidence 79999998753
No 61
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2.2e-30 Score=246.31 Aligned_cols=282 Identities=12% Similarity=0.064 Sum_probs=195.7
Q ss_pred CcccccccccccccCCCCC-------cccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCe--
Q 016134 76 PSYNRLKNNLWVSSGSEDR-------IPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNC-- 146 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~-------~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~-- 146 (394)
.+|++ ++..+++|++|. .|++|+++.+....... . .....-...++...+.++. + .+..++.++
T Consensus 20 v~fs~--dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~-~-~~~~~~~l~~~~~~v~s~~-~--~~~~~~~g~~~ 92 (365)
T 4h5i_A 20 AKFLN--NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQ-F-HILSEFALEDNDDSPTAID-A--SKGIILVGCNE 92 (365)
T ss_dssp EEEEE--TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHH-E-EEEEEEECCTTSCCCCEEE-E--ETTEEEEECCC
T ss_pred EEEeC--CCcEEEEECCCccccCCCCEEEEEEEcCCCcceeee-e-eeeeEEEccCCCCceEEEE-e--CCCEEEEEECC
Confidence 34444 788888987755 49999998765321000 0 0000012345555666555 3 334443333
Q ss_pred -----ecCCCCCeEEEEEcCCCceEEE---Ee-----cccCCCeEEEEecCCCCEEEEEe--CCCc--eeecCCCcEEEe
Q 016134 147 -----VRGDECRFLHSWFCGEGLTMLA---KL-----EGHEKAVSGIALPLRSDKLFSGS--RDGT--AWNIESSAEFSL 209 (394)
Q Consensus 147 -----~~g~~~~~i~iWd~~~~~~~~~---~l-----~~h~~~V~~l~~s~~~~~l~sgs--~Dg~--vWd~~~~~~~~~ 209 (394)
.+++.++.+|+|++.+....+. .. ..+...+.+++|+|||++|++++ .|++ |||+++++.+..
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~ 172 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE 172 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE
Confidence 3456778999999865432222 22 23456699999999999987655 6777 699999887643
Q ss_pred cCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEE--EcCCCCCcEEEEEc-
Q 016134 210 DGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMT--LNDHTDAPMSLLCW- 284 (394)
Q Consensus 210 ~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~--~~~h~~~v~~l~~~- 284 (394)
.. |...|.+++|+ +++|++++.| .+++|+..+++.+.. ...|...|.+++|+
T Consensus 173 ~~----------------------~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp 229 (365)
T 4h5i_A 173 IE----------------------TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIA 229 (365)
T ss_dssp EE----------------------CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEE
T ss_pred eC----------------------CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcC
Confidence 32 44556666665 6778888754 566777777776543 35688889999998
Q ss_pred -CCEEEEEeCCC----cEEEEEeCCCceee----EeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCcee
Q 016134 285 -DQFLLSCSLDH----TIKVWFATGRGNLE----AAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMER 355 (394)
Q Consensus 285 -~~~l~s~s~Dg----~i~vwd~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~ 355 (394)
+.++++++.|+ .+++||+....... .+..+.. .+.+ +.|+|+|+ +||+|+.|++|+|||+++++.+
T Consensus 230 dg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~V~~--~~~Spdg~-~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 230 DDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK--GITS--MDVDMKGE-LAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp TTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS--CEEE--EEECTTSC-EEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC--CeEe--EEECCCCC-ceEEEcCCCEEEEEECCCCcEE
Confidence 78999999887 68899987654322 2223332 3333 34799999 9999999999999999999988
Q ss_pred EEEe--cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 356 GRIF--SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 356 ~~~~--~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
..+. |...|++|+|+||+ +|++++.|++|+||++...
T Consensus 305 ~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 305 KIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 8874 36789999999999 9999999999999999643
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-30 Score=248.15 Aligned_cols=258 Identities=15% Similarity=0.159 Sum_probs=213.8
Q ss_pred ceeeecccccccc-ccCCCeecC------CCCCeEEEEEcCCCc--eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-
Q 016134 128 TSKKTTLKNVCCH-WLLGNCVRG------DECRFLHSWFCGEGL--TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT- 197 (394)
Q Consensus 128 ~v~~~~~~~~~~~-~~~~~~~~g------~~~~~i~iWd~~~~~--~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~- 197 (394)
.+.+++ |+|++. +++++...| +.|+.|+|||+.++. +++..+ .|...|++++|+|++++|++++.|+.
T Consensus 14 ~v~~~~-~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v 91 (416)
T 2pm9_A 14 RTATFA-WSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDNGSL 91 (416)
T ss_dssp ESCBCC-BCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESSSCE
T ss_pred hcceEe-eCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccCCeE
Confidence 566677 999986 888887777 778899999998763 233333 68999999999999999999999998
Q ss_pred -eeecCC----C-cEEEecCCCCcEEEEEEcCC---EEEEEecC---------------------------CCCCCEEEE
Q 016134 198 -AWNIES----S-AEFSLDGPVGEVYSMVVANE---MLFAGAQD---------------------------GHTRPVTCL 241 (394)
Q Consensus 198 -vWd~~~----~-~~~~~~~~~~~v~~l~~~~~---~l~~~~~~---------------------------~h~~~V~~l 241 (394)
+||+.+ . ....+..|...|.+++|+++ .+++++.+ .|...|.++
T Consensus 92 ~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 92 ELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 699987 3 33467889999999999975 78887765 266789999
Q ss_pred Eec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCC------CCCcEEEEEc--C-CEEEEEeCCC---cEEEEEeCCC-
Q 016134 242 AVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDH------TDAPMSLLCW--D-QFLLSCSLDH---TIKVWFATGR- 305 (394)
Q Consensus 242 ~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h------~~~v~~l~~~--~-~~l~s~s~Dg---~i~vwd~~~~- 305 (394)
+|+ +.+|++++.|+.|++||+++++++..+..| ...|.+++|+ + .+|++++.|+ .|++||+++.
T Consensus 172 ~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~ 251 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN 251 (416)
T ss_dssp EECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT
T ss_pred EeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC
Confidence 997 468999999999999999999999998876 7889999999 3 5899999998 9999999986
Q ss_pred ceeeEee-cccCCcceEEEEeeECC-CCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC--EEEEEeC
Q 016134 306 GNLEAAY-THKEDNGVLALGGLNDP-DGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK--LFFTGDG 380 (394)
Q Consensus 306 ~~~~~~~-~~~~~~~~~~~~~~~s~-~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~ 380 (394)
..+..+. .|... +.+ +.|+| ++. +|++++.|+.|++||+++++.+..+.. ...|++++|+|++ +|++++.
T Consensus 252 ~~~~~~~~~~~~~--v~~--~~~s~~~~~-~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 326 (416)
T 2pm9_A 252 TPLQTLNQGHQKG--ILS--LDWCHQDEH-LLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASF 326 (416)
T ss_dssp SCSBCCCSCCSSC--EEE--EEECSSCSS-CEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCS
T ss_pred CCcEEeecCccCc--eeE--EEeCCCCCC-eEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEec
Confidence 4444444 44433 333 34688 777 899999999999999999988888765 6789999999987 9999999
Q ss_pred CCeEEEEeCCCC
Q 016134 381 AGMLGVWKLLAK 392 (394)
Q Consensus 381 Dg~I~vWd~~~~ 392 (394)
|+.|++|++...
T Consensus 327 d~~i~iw~~~~~ 338 (416)
T 2pm9_A 327 DNKIEVQTLQNL 338 (416)
T ss_dssp SSEEEEEESCCC
T ss_pred CCcEEEEEccCC
Confidence 999999999764
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-29 Score=243.31 Aligned_cols=257 Identities=16% Similarity=0.129 Sum_probs=211.7
Q ss_pred CCccceeeecccccccc-ccCCCeecCCCCCeEEEEEc----CCCce-----EEEEecc----------cCCCeEEEEec
Q 016134 124 GDKSTSKKTTLKNVCCH-WLLGNCVRGDECRFLHSWFC----GEGLT-----MLAKLEG----------HEKAVSGIALP 183 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~-~~~~~~~~g~~~~~i~iWd~----~~~~~-----~~~~l~~----------h~~~V~~l~~s 183 (394)
.|...|.++. ++|++. ++++++.+| .|++|++ .++.. ....+.. |...|++++|+
T Consensus 43 ~~~~~v~~~~-~s~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 43 VKLDNIVSST-WNPLDESILAYGEKNS----VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp EECSCCSEEE-ECSSCTTEEEEEETBT----EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred eccCceEEEE-ECCCCCcEEEEecCCc----eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 3446889999 999999 998877666 9999999 77632 4455544 78899999999
Q ss_pred CCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC--EEEEEecC------------------CCCCC----
Q 016134 184 LRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQD------------------GHTRP---- 237 (394)
Q Consensus 184 ~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~~------------------~h~~~---- 237 (394)
|++++|++++.|+. +||........+..|...|.+++|+++ .+++++.+ .+...
T Consensus 118 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 99999999999998 699554445577889999999999987 78888766 23333
Q ss_pred -----------EEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeC
Q 016134 238 -----------VTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFAT 303 (394)
Q Consensus 238 -----------V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~ 303 (394)
+.++.|+ ++.+++++.|+.|++||+++++.+..+..|...|.+++|+ +++|++++.|+.|++||++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp --------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred eeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 7777887 6789999999999999999999999999999999999998 7899999999999999999
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGA 381 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~D 381 (394)
+.+.+..+..+...... +.|+|++ +|++++.|+.|++||+++++.+..+.. ...|.+++|+|++ +|++++.|
T Consensus 278 ~~~~~~~~~~~~~~i~~----~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 278 NGNSQNCFYGHSQSIVS----ASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp SBSCSEEECCCSSCEEE----EEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred CCccceEecCCCccEEE----EEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 88877777666543332 3458887 788999999999999999988877765 6789999999999 99999999
Q ss_pred CeEEEEeCCC
Q 016134 382 GMLGVWKLLA 391 (394)
Q Consensus 382 g~I~vWd~~~ 391 (394)
|.|++||+.+
T Consensus 352 g~i~i~~~~~ 361 (425)
T 1r5m_A 352 GQVNVYDLKK 361 (425)
T ss_dssp SCEEEEECHH
T ss_pred CeEEEEECCC
Confidence 9999999864
No 64
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-30 Score=258.29 Aligned_cols=250 Identities=8% Similarity=0.021 Sum_probs=190.0
Q ss_pred ccceeeeccccccc---------cccCCCee---------------cCCCCCeEEEEEcCCCce---EEEEecccCCCeE
Q 016134 126 KSTSKKTTLKNVCC---------HWLLGNCV---------------RGDECRFLHSWFCGEGLT---MLAKLEGHEKAVS 178 (394)
Q Consensus 126 ~~~v~~~~~~~~~~---------~~~~~~~~---------------~g~~~~~i~iWd~~~~~~---~~~~l~~h~~~V~ 178 (394)
...|.++. |+|.. .++|.+.. +++.|++|+|||+.++.. ...++.+|.+.|.
T Consensus 133 ~~~V~sv~-w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 133 GGLVTDIA-WLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CC--CCCS-CEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCceeEEE-ecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 35778888 88876 77777553 366788999999976532 2345678899999
Q ss_pred EEEecCC------CCEEEEEeCCCc--eeecCCCcEEE--ecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec-CCe
Q 016134 179 GIALPLR------SDKLFSGSRDGT--AWNIESSAEFS--LDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-RSR 247 (394)
Q Consensus 179 ~l~~s~~------~~~l~sgs~Dg~--vWd~~~~~~~~--~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~ 247 (394)
+|+|+|+ +.+||+++.|++ |||+.++.... ......+.. ...+|...|.+++|+ ++.
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~------------~l~~h~~~v~sv~~s~~~~ 279 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL------------TLSLADSLITTFDFLSPTT 279 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE------------EECCTTTCEEEEEESSSSE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE------------EEEcCCCCEEEEEecCCCe
Confidence 9999996 579999999999 69998764210 000000110 123788999999997 678
Q ss_pred EEEEeCCCeEEEEeCCCC-ceeEEEcCCCCCcEEEE--Ec--C-CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceE
Q 016134 248 LCSGSMDNTIRVWELDTL-EPVMTLNDHTDAPMSLL--CW--D-QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVL 321 (394)
Q Consensus 248 l~sgs~Dg~V~iwd~~~~-~~~~~~~~h~~~v~~l~--~~--~-~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 321 (394)
|++|+.||+|++||++++ .+...+.+|...|.+|+ |. + .+|++++.|++|+|||+++.+.+..+..+.....+.
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~ 359 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLV 359 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCC
T ss_pred EEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCccc
Confidence 999999999999999976 45667889999999994 44 4 689999999999999999877766666554322222
Q ss_pred EEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe-cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 322 ALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
++.|+|+++ .|++++.|++|+|||++++..+..+. +...|++|+|+|++ +|++|+.|++|++||+..
T Consensus 360 --~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 360 --PVVYCPQIY-SYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp --CEEEETTTT-EEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred --ceEeCCCcC-eEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 234699998 79999999999999999987765554 47789999999999 999999999999999753
No 65
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-31 Score=265.13 Aligned_cols=271 Identities=7% Similarity=0.001 Sum_probs=196.6
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccc------ccccCCCeecCCCCCeEE
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVC------CHWLLGNCVRGDECRFLH 156 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~------~~~~~~~~~~g~~~~~i~ 156 (394)
+...++|+|.|++|+|||++++...... .....+|...|..++ |+|. +.+||+++.+| +|+
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~--------~~~l~~~~~~V~~v~-wsp~~~~~~~~~~LAs~s~Dg----tvr 238 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVK--------VQTIVHSFGEVWDLK-WHEGCHAPHLVGCLSFVSQEG----TIN 238 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEE--------EEEEEECCCSEEEEE-ECSSCCCSSSSCEEEEEETTS----CEE
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceE--------EEEEEecCCcEEEEE-ECCCCCCCCCCceEEEEecCC----eEE
Confidence 4556788999999999999876532100 001235556788998 9986 45677666655 999
Q ss_pred EEEcCCCc----------eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCC
Q 016134 157 SWFCGEGL----------TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANE 224 (394)
Q Consensus 157 iWd~~~~~----------~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~ 224 (394)
|||+.++. ++..++.+|...|++++|+++ ..|++|+.||+ +||++++.....
T Consensus 239 lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~--------------- 302 (524)
T 2j04_B 239 FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSF--------------- 302 (524)
T ss_dssp EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSE---------------
T ss_pred EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceE---------------
Confidence 99997552 123578899999999999986 48999999999 699987632100
Q ss_pred EEEEEecCCCCCCEEEE--Eec--C-CeEEEEeCCCeEEEEeCCCCceeEEEcCCCC--CcEEEEEc--CCEEEEEeCCC
Q 016134 225 MLFAGAQDGHTRPVTCL--AVG--R-SRLCSGSMDNTIRVWELDTLEPVMTLNDHTD--APMSLLCW--DQFLLSCSLDH 295 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l--~~~--~-~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~--~v~~l~~~--~~~l~s~s~Dg 295 (394)
...+|...|.+| .|+ + .+|++++.|++|+|||+++++++.++.+|.. .|.+++|+ ++.|++++.|+
T Consensus 303 -----~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 303 -----YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp -----EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred -----EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 112688888888 455 4 6899999999999999999888777777653 57889998 67899999999
Q ss_pred cEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC-----c---------ee------
Q 016134 296 TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF-----M---------ER------ 355 (394)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~-----~---------~~------ 355 (394)
+|++||++.+..+..+..|...+ .++ .|+|+++ +|++|+.|++|+|||+... + .+
T Consensus 378 tv~lwd~~~~~~~~~l~gH~~~V--~sv--a~Sp~g~-~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~s 452 (524)
T 2j04_B 378 SLRAVPSRAAFAVHPLVSRETTI--TAI--GVSRLHP-MVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYS 452 (524)
T ss_dssp EEEEEETTCTTCCEEEEECSSCE--EEE--ECCSSCC-BCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCC
T ss_pred cEEEEECcccccceeeecCCCce--EEE--EeCCCCC-eEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccC
Confidence 99999999988877777766543 333 4699999 8999999999999985321 0 00
Q ss_pred ------------------------EEEe-cCCcEEEEEECCCC----EEEEEeCCCeEEEEeCCCC
Q 016134 356 ------------------------GRIF-SKHEVRVIEIGPDK----LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 356 ------------------------~~~~-~~~~v~~l~~sp~~----~l~tgs~Dg~I~vWd~~~~ 392 (394)
..+. +...|.+|+|+|++ .|++|+.||.|+||++.-+
T Consensus 453 p~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 453 IKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp SSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC
T ss_pred CCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcccc
Confidence 0000 13468999999994 8999999999999998743
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=1.8e-29 Score=237.03 Aligned_cols=264 Identities=15% Similarity=0.176 Sum_probs=205.6
Q ss_pred CCCCccceeeeccccccccccC-CCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCC---CCEEEEEeCCCc
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLL-GNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLR---SDKLFSGSRDGT 197 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~-~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~sgs~Dg~ 197 (394)
..+|...|.++. |+|++..++ +++. ...++.|++||+.++........+|...|++++|+|+ +++|++++.|+.
T Consensus 14 ~~~h~~~v~~~~-~~p~~~~l~~~~s~-~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 14 QKGFNYTVFDCK-WVPCSAKFVTMGNF-ARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEECSSCEEEEE-ECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred ccCCCCceEEEE-EcCCCceEEEecCc-cCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 356888999999 999885544 3333 1236699999998874444444589999999999998 699999999998
Q ss_pred --eeecCCCc--EEEecCCCCcEEEEEEc------CC--EEEEEecC-------------------CC----CCCEEEEE
Q 016134 198 --AWNIESSA--EFSLDGPVGEVYSMVVA------NE--MLFAGAQD-------------------GH----TRPVTCLA 242 (394)
Q Consensus 198 --vWd~~~~~--~~~~~~~~~~v~~l~~~------~~--~l~~~~~~-------------------~h----~~~V~~l~ 242 (394)
+||+++++ ...+..|...|.++.|. ++ .+++++.+ .| ...|.+++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 69999886 34678899999999664 44 78888776 12 23788888
Q ss_pred ----ec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc-----CCEEEEEeCCCcEEEEEeCCCceeeEe
Q 016134 243 ----VG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW-----DQFLLSCSLDHTIKVWFATGRGNLEAA 311 (394)
Q Consensus 243 ----~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~-----~~~l~s~s~Dg~i~vwd~~~~~~~~~~ 311 (394)
|+ +.+|++++.|+.|++||++++++... ..|...|.++.|+ +.+|++++.|+.|++||+++.+....+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 43 78999999999999999999887554 5588999999997 479999999999999999876655444
Q ss_pred e-----cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc-------------------eeEEEe-cCCcEEE
Q 016134 312 Y-----THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM-------------------ERGRIF-SKHEVRV 366 (394)
Q Consensus 312 ~-----~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~-------------------~~~~~~-~~~~v~~ 366 (394)
. .+... +.+ +.|+|++..+|++++.|+.|++||++... .+..+. +...|++
T Consensus 251 ~~~~~~~~~~~--v~~--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~ 326 (357)
T 3i2n_A 251 ASVSEKAHKST--VWQ--VRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISS 326 (357)
T ss_dssp EEEEEECCSSC--EEE--EEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEE
T ss_pred eeeccCCCcCC--EEE--EEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeE
Confidence 3 34332 333 34689887689999999999999998643 233333 3668999
Q ss_pred EEECCCC-EEE-EEeCCCeEEEEeCCCC
Q 016134 367 IEIGPDK-LFF-TGDGAGMLGVWKLLAK 392 (394)
Q Consensus 367 l~~sp~~-~l~-tgs~Dg~I~vWd~~~~ 392 (394)
++|+|++ +|+ +++.|+.|++||+...
T Consensus 327 ~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 327 LDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 9999999 676 8999999999998764
No 67
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=8e-30 Score=257.02 Aligned_cols=285 Identities=11% Similarity=0.099 Sum_probs=218.1
Q ss_pred ccc-ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCcc---ceeeecccccc-ccccCCCeecCCCCCeEEE
Q 016134 83 NNL-WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKS---TSKKTTLKNVC-CHWLLGNCVRGDECRFLHS 157 (394)
Q Consensus 83 ~~~-~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~---~v~~~~~~~~~-~~~~~~~~~~g~~~~~i~i 157 (394)
++. .+++++.|+++++||++++.... ...+|.. .|.++. ++|+ +.++++++.+| .|++
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~------------~~~~~~~~~~~v~~~~-~~~~~~~~l~~~~~dg----~i~v 233 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSA------------SDRTHHKQGSFVRDVE-FSPDSGEFVITVGSDR----KISC 233 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEE------------EECSSSCTTCCEEEEE-ECSTTCCEEEEEETTC----CEEE
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcceee------------eecccCCCCceEEEEE-ECCCCCCEEEEEeCCC----eEEE
Confidence 444 68999999999999988766432 3456666 899999 9999 99998877766 9999
Q ss_pred EEcCCCceEEEEe-c---ccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEE-ecCC----CCcEEEEEEcCC-E
Q 016134 158 WFCGEGLTMLAKL-E---GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFS-LDGP----VGEVYSMVVANE-M 225 (394)
Q Consensus 158 Wd~~~~~~~~~~l-~---~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~-~~~~----~~~v~~l~~~~~-~ 225 (394)
||+.++ +.+..+ . +|...|.+++|+ ++++|++++.|+. +||+++++.+. +..+ ...+..+.+... .
T Consensus 234 wd~~~~-~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (615)
T 1pgu_A 234 FDGKSG-EFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGR 311 (615)
T ss_dssp EETTTC-CEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTE
T ss_pred EECCCC-CEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCe
Confidence 999887 677777 6 899999999999 9999999999998 69998876652 2222 234444444322 3
Q ss_pred EEEEecC---------------------------------------------------CCCCCEEEEEec-CCeEEEEeC
Q 016134 226 LFAGAQD---------------------------------------------------GHTRPVTCLAVG-RSRLCSGSM 253 (394)
Q Consensus 226 l~~~~~~---------------------------------------------------~h~~~V~~l~~~-~~~l~sgs~ 253 (394)
+++++.+ .|...|.+++|. ++.|++++.
T Consensus 312 l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 391 (615)
T 1pgu_A 312 IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISW 391 (615)
T ss_dssp EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEET
T ss_pred EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeC
Confidence 4433332 255566666665 567778888
Q ss_pred CCeEEEEeCC----------------------------------CCceeEEEcCCCCCcEEEEEcCCEEEEEeC-CCcEE
Q 016134 254 DNTIRVWELD----------------------------------TLEPVMTLNDHTDAPMSLLCWDQFLLSCSL-DHTIK 298 (394)
Q Consensus 254 Dg~V~iwd~~----------------------------------~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~-Dg~i~ 298 (394)
|+.|++||++ +++.+..+. |...+.++++++++|++++. |+.|+
T Consensus 392 d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~d~~i~ 470 (615)
T 1pgu_A 392 DDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVR-LNSPGSAVSLSQNYVAVGLEEGNTIQ 470 (615)
T ss_dssp TTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSEEEEEETTTSCEE
T ss_pred CCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecc-cCCCceEEEEcCCEEEEeecCCCeEE
Confidence 8888777764 344455554 77889999999999999999 99999
Q ss_pred EEEeCCCcee-eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe--cCCcEEEEEECC----
Q 016134 299 VWFATGRGNL-EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF--SKHEVRVIEIGP---- 371 (394)
Q Consensus 299 vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~--~~~~v~~l~~sp---- 371 (394)
+||+...+.. ..+..+.. .+. ++.|+|+++ +|++++.|+.|++||+.+++.+..+. +...|++++|+|
T Consensus 471 ~~~~~~~~~~~~~~~~~~~--~v~--~~~~s~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 471 VFKLSDLEVSFDLKTPLRA--KPS--YISISPSET-YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 545 (615)
T ss_dssp EEETTEEEEEEECSSCCSS--CEE--EEEECTTSS-EEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred EEECCCccccccccCCccC--ceE--EEEECCCCC-EEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccc
Confidence 9999875444 23333333 333 334799999 99999999999999999998887776 567899999999
Q ss_pred ------CC-EEEEEeCCCeEEEEeCCCC
Q 016134 372 ------DK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 372 ------~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
++ +|++++.|+.|++||+.+.
T Consensus 546 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 546 ANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESSCT
T ss_pred ccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 88 9999999999999999874
No 68
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=8.3e-29 Score=231.08 Aligned_cols=224 Identities=22% Similarity=0.378 Sum_probs=190.4
Q ss_pred ceEEEEecccCCCeEEEEecCC-CCEEEEEeCCCc--eeecCCCcE------EEecCCCCcEEEEEEcCC--EEEEEecC
Q 016134 164 LTMLAKLEGHEKAVSGIALPLR-SDKLFSGSRDGT--AWNIESSAE------FSLDGPVGEVYSMVVANE--MLFAGAQD 232 (394)
Q Consensus 164 ~~~~~~l~~h~~~V~~l~~s~~-~~~l~sgs~Dg~--vWd~~~~~~------~~~~~~~~~v~~l~~~~~--~l~~~~~~ 232 (394)
.++..+|+||++.|++|+|+|+ +++|+||+.|++ |||+.+.+. ..+.+|...|.+++|+++ .+++++.|
T Consensus 28 ~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d 107 (340)
T 4aow_A 28 MTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD 107 (340)
T ss_dssp EEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence 3677789999999999999997 689999999999 699986542 256789999999999998 88888877
Q ss_pred ------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCce-eEEEcCCCCCcEEEEEc----CCE
Q 016134 233 ------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEP-VMTLNDHTDAPMSLLCW----DQF 287 (394)
Q Consensus 233 ------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~-~~~~~~h~~~v~~l~~~----~~~ 287 (394)
.+...+..+.+. +.+|++++.|+.+++||+..... ...+.+|...+..+.|. ..+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 456677777776 67899999999999999976554 34456799999999987 458
Q ss_pred EEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEE
Q 016134 288 LLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVI 367 (394)
Q Consensus 288 l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l 367 (394)
+++++.|+.|++||+++.+.+..+..|...+..+ .|+|+++ +|++++.|+.|++||+++.+.+..+.....|.++
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~----~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~ 262 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTV----TVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINAL 262 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE----EECTTSS-EEEEEETTCEEEEEETTTTEEEEEEECSSCEEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEE----EECCCCC-EEEEEeCCCeEEEEEeccCceeeeecCCceEEee
Confidence 8999999999999999998888887776544333 4699998 9999999999999999999999888888899999
Q ss_pred EECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 368 EIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 368 ~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|+|++.+++++.|+.|++||++..
T Consensus 263 ~~~~~~~~~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 263 CFSPNRYWLCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EECSSSSEEEEEETTEEEEEETTTT
T ss_pred ecCCCCceeeccCCCEEEEEECCCC
Confidence 9999997778888999999998753
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.5e-29 Score=234.04 Aligned_cols=252 Identities=11% Similarity=0.115 Sum_probs=195.1
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc---eEEEEecccCCCeEEEEecC--CCCEEEEEeCC
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL---TMLAKLEGHEKAVSGIALPL--RSDKLFSGSRD 195 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~---~~~~~l~~h~~~V~~l~~s~--~~~~l~sgs~D 195 (394)
...||...|.++. |+|++.++++++.+| .|++||+.++. +.+..+.+|...|++++|+| ++++|++++.|
T Consensus 6 ~~~gH~~~v~~~~-~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 6 FDSGHDDLVHDVV-YDFYGRHVATCSSDQ----HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp EECCCSSCEEEEE-ECSSSSEEEEEETTS----EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred cCcccccceeEEE-EcCCCCEEEEeeCCC----eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 5679999999999 999999999887666 99999997553 57788899999999999999 69999999999
Q ss_pred Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCceeE
Q 016134 196 GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLEPVM 269 (394)
Q Consensus 196 g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~~~~ 269 (394)
+. +||+++++..... .. .-.......|...|.+++|+ +++|++++.|+.|++||+++++.+.
T Consensus 81 g~v~vwd~~~~~~~~~~---~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSG---RR---------WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp SCEEEEEECTTSCTTSS---CS---------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTT
T ss_pred CeEEEEecCCCcccccc---cC---------cceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhc
Confidence 98 6999886421000 00 00011233678888888886 5689999999999999998877544
Q ss_pred EEc-------------CCCCCcEEEEEc-----CCEEEEEeCCCcEEEEEeCCCce--eeEeecccCCcceEEEEeeECC
Q 016134 270 TLN-------------DHTDAPMSLLCW-----DQFLLSCSLDHTIKVWFATGRGN--LEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 270 ~~~-------------~h~~~v~~l~~~-----~~~l~s~s~Dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
.+. .|...+.++.|+ +.+|++++.|+.+.+|+....+. +..+..|... +.+ +.|+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--i~~--~~~~p 224 (351)
T 3f3f_A 149 SWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL--IRS--ISWAP 224 (351)
T ss_dssp CCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC--EEE--EEECC
T ss_pred cccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc--eeE--EEECC
Confidence 332 578899999997 67999999999998888766554 3333344433 333 34689
Q ss_pred CCC---cEEEEEeCCCeEEEEECCCC----------------------------------------------ceeEEEe-
Q 016134 330 DGK---PVLICACNDNTVHLYELPSF----------------------------------------------MERGRIF- 359 (394)
Q Consensus 330 ~g~---~~l~sgs~dg~I~iwd~~~~----------------------------------------------~~~~~~~- 359 (394)
++. .+|++++.|+.|++||++.. +.+..+.
T Consensus 225 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
T 3f3f_A 225 SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD 304 (351)
T ss_dssp CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECT
T ss_pred CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec
Confidence 982 39999999999999999864 2333333
Q ss_pred cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 360 SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 360 ~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
+...|++++|+|++ +|++++.||.|++|++.+..
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 25679999999999 99999999999999998753
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.8e-30 Score=251.93 Aligned_cols=266 Identities=10% Similarity=0.151 Sum_probs=206.1
Q ss_pred cccccccCCCCCcccccccCC---CCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEE
Q 016134 83 NNLWVSSGSEDRIPHVRNREN---PGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWF 159 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~---~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd 159 (394)
++..+++||.|++|++||+++ +...... ...+|...|.++. ++|.+.++++++.+| .|++||
T Consensus 75 ~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~----------~~~~h~~~v~~~~-~~~~~~~l~s~s~dg----~i~vwd 139 (437)
T 3gre_A 75 ETPYLITGSDQGVIKIWNLKEIIVGEVYSSS----------LTYDCSSTVTQIT-MIPNFDAFAVSSKDG----QIIVLK 139 (437)
T ss_dssp SSCEEEEEETTSEEEEEEHHHHHTTCCCSCS----------EEEECSSCEEEEE-ECTTSSEEEEEETTS----EEEEEE
T ss_pred CCCEEEEecCCceEEEeECcccccCccccee----------eeccCCCCEEEEE-EeCCCCEEEEEeCCC----EEEEEE
Confidence 356889999999999999986 3311111 2225778999999 999999998777666 999999
Q ss_pred cC---CCceEEEEecc------------cCCCeEEEE--ecCCCCEEEEEeCCCc--eeecCCCcEEE-ecCCCCcEEEE
Q 016134 160 CG---EGLTMLAKLEG------------HEKAVSGIA--LPLRSDKLFSGSRDGT--AWNIESSAEFS-LDGPVGEVYSM 219 (394)
Q Consensus 160 ~~---~~~~~~~~l~~------------h~~~V~~l~--~s~~~~~l~sgs~Dg~--vWd~~~~~~~~-~~~~~~~v~~l 219 (394)
+. ++ +.+..+.+ +...+.++. +++++.+|++++.|+. +||+++++.+. +..+
T Consensus 140 ~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~------- 211 (437)
T 3gre_A 140 VNHYQQE-SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS------- 211 (437)
T ss_dssp EEEEEET-TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC-------
T ss_pred eccccCC-ceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC-------
Confidence 84 33 33333332 456677776 5678999999999999 69999988763 2210
Q ss_pred EEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc-CCCCCcEEEEEc------CCEEEE
Q 016134 220 VVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN-DHTDAPMSLLCW------DQFLLS 290 (394)
Q Consensus 220 ~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-~h~~~v~~l~~~------~~~l~s 290 (394)
.|...|.+++|+ +.+|++|+.|+.|++||+++++++.++. .|...|.++++. +.+|++
T Consensus 212 -------------~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 212 -------------PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp -------------GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred -------------CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 267788888886 6789999999999999999999999886 788899999766 348999
Q ss_pred EeCCCcEEEEEeCCCceeeEeecccCCc------------------------ceEEEEeeECCCCCcEEEEEeCCCeEEE
Q 016134 291 CSLDHTIKVWFATGRGNLEAAYTHKEDN------------------------GVLALGGLNDPDGKPVLICACNDNTVHL 346 (394)
Q Consensus 291 ~s~Dg~i~vwd~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~s~~g~~~l~sgs~dg~I~i 346 (394)
++.|+.|++||+++++.+..+..+.... .+.++ .|+ ++. +|++++.|+.|++
T Consensus 279 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l--~~~-~~~-~l~s~~~d~~i~~ 354 (437)
T 3gre_A 279 GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI--SVS-NDK-ILLTDEATSSIVM 354 (437)
T ss_dssp ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE--EEE-TTE-EEEEEGGGTEEEE
T ss_pred EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE--EEC-Cce-EEEecCCCCeEEE
Confidence 9999999999999988877776543211 12222 345 555 8999999999999
Q ss_pred EECCCCceeEEEe--------------------------------------cCCcEEEEEECCC--C-EEEEEeCCCeEE
Q 016134 347 YELPSFMERGRIF--------------------------------------SKHEVRVIEIGPD--K-LFFTGDGAGMLG 385 (394)
Q Consensus 347 wd~~~~~~~~~~~--------------------------------------~~~~v~~l~~sp~--~-~l~tgs~Dg~I~ 385 (394)
||+.+++....+. +...|++++|+++ + +|++|+.||.|+
T Consensus 355 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~ 434 (437)
T 3gre_A 355 FSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIG 434 (437)
T ss_dssp EETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEE
T ss_pred EECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEE
Confidence 9999887665554 4567999999998 5 999999999999
Q ss_pred EEe
Q 016134 386 VWK 388 (394)
Q Consensus 386 vWd 388 (394)
||+
T Consensus 435 iw~ 437 (437)
T 3gre_A 435 IFQ 437 (437)
T ss_dssp EEC
T ss_pred EeC
Confidence 995
No 71
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.8e-30 Score=270.66 Aligned_cols=294 Identities=10% Similarity=0.055 Sum_probs=214.8
Q ss_pred CCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCe
Q 016134 75 PPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 154 (394)
..+|++ ++..+++|+.|++|+||+.++.... ....|...|..++ |+| +.++++++.++ +
T Consensus 22 ~lafsp--dg~~lAsgs~Dg~I~lw~~~~~~~~-------------~~~~~~~~V~~l~-fsp-g~~L~S~s~D~----~ 80 (902)
T 2oaj_A 22 AAAFDF--TQNLLAIATVTGEVHIYGQQQVEVV-------------IKLEDRSAIKEMR-FVK-GIYLVVINAKD----T 80 (902)
T ss_dssp EEEEET--TTTEEEEEETTSEEEEECSTTCEEE-------------EECSSCCCEEEEE-EET-TTEEEEEETTC----E
T ss_pred EEEECC--CCCEEEEEeCCCEEEEEeCCCcEEE-------------EEcCCCCCEEEEE-EcC-CCEEEEEECcC----e
Confidence 345555 7889999999999999998765432 1223556899999 999 77887766554 9
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEE------------ecCCCCcEEEEE
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFS------------LDGPVGEVYSMV 220 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~------------~~~~~~~v~~l~ 220 (394)
|++||+.++ +++..+. |...|++++|+|++++|++|+.||. +||+++++... ..+|.+.|.+++
T Consensus 81 v~lWd~~~~-~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 81 VYVLSLYSQ-KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp EEEEETTTC-SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred EEEEECCCC-cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 999999887 6677775 7789999999999999999999999 69999887641 246788999999
Q ss_pred EcCC---EEEEEecCC-----------------------------------CCCCEEEEEec--CCeEEEEeCCCeEEEE
Q 016134 221 VANE---MLFAGAQDG-----------------------------------HTRPVTCLAVG--RSRLCSGSMDNTIRVW 260 (394)
Q Consensus 221 ~~~~---~l~~~~~~~-----------------------------------h~~~V~~l~~~--~~~l~sgs~Dg~V~iw 260 (394)
|+|+ .+++++.++ |...|.+++|+ +.+|++++.|++|++|
T Consensus 159 ~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 159 WNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp EETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred EccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 9995 566665442 24779999998 6899999999999999
Q ss_pred eCCCCceeEE--Ec---C-------------CCCCcEEEEEc----C---CEEEEEeCC-----CcEEEEEeC-------
Q 016134 261 ELDTLEPVMT--LN---D-------------HTDAPMSLLCW----D---QFLLSCSLD-----HTIKVWFAT------- 303 (394)
Q Consensus 261 d~~~~~~~~~--~~---~-------------h~~~v~~l~~~----~---~~l~s~s~D-----g~i~vwd~~------- 303 (394)
|+++++++.. +. . |...|.+++|. . .+|++++.| ..+++|++.
T Consensus 239 d~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~ 318 (902)
T 2oaj_A 239 DANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSI 318 (902)
T ss_dssp ETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGG
T ss_pred ECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccc
Confidence 9999887754 21 1 34468899884 1 356666555 267777631
Q ss_pred ----------------------------------------------------------------CCceeeE-------ee
Q 016134 304 ----------------------------------------------------------------GRGNLEA-------AY 312 (394)
Q Consensus 304 ----------------------------------------------------------------~~~~~~~-------~~ 312 (394)
++..... +.
T Consensus 319 ~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~ 398 (902)
T 2oaj_A 319 TSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLS 398 (902)
T ss_dssp CCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGT
T ss_pred cchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccc
Confidence 1100000 00
Q ss_pred cccCCcceEEE------------------------------EeeECCCCCcEEEEEeCCCeEEEEECCCCcee----EEE
Q 016134 313 THKEDNGVLAL------------------------------GGLNDPDGKPVLICACNDNTVHLYELPSFMER----GRI 358 (394)
Q Consensus 313 ~~~~~~~~~~~------------------------------~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~----~~~ 358 (394)
.+...+..+++ .+.|+|+++ +|++|+.|++|++||+.++... ..+
T Consensus 399 ~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~-~laSgs~DgtVrlWd~~~g~~~~~~~~~~ 477 (902)
T 2oaj_A 399 WLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGT-AFITGHSNGSVRIYDASHGDIQDNASFEV 477 (902)
T ss_dssp TBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEE-EEEEEETTSEEEEEESSCCTTTTTBCEEE
T ss_pred ccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCc-EEEEecCCCcEEEEECCCccccCCceEEe
Confidence 00000000111 123578888 9999999999999999887421 111
Q ss_pred --------ecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 359 --------FSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 359 --------~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.+...|++++|+|++ +||+|+.||+|+||++.+.
T Consensus 478 ~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 478 NLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp EHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred echhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 235679999999999 9999999999999998754
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=267.07 Aligned_cols=301 Identities=10% Similarity=-0.028 Sum_probs=213.3
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCcccc-ccCCCCccceeeecccccc-ccccCCCeecCCCCC
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTV-SDESGDKSTSKKTTLKNVC-CHWLLGNCVRGDECR 153 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~-~~~~g~~~~v~~~~~~~~~-~~~~~~~~~~g~~~~ 153 (394)
.+|++ +..++++|+.|++|++||++++...... ....... ....+|...|.+++ |+|. ...+++++ .++
T Consensus 104 v~~sp--~g~~l~sgs~dg~V~lwd~~~~~~~~~~--i~~~~~~~~~~~~h~~~V~sl~-~sp~~~~~l~~g~----~dg 174 (902)
T 2oaj_A 104 IDTDA--SLDWMLIGLQNGSMIVYDIDRDQLSSFK--LDNLQKSSFFPAARLSPIVSIQ-WNPRDIGTVLISY----EYV 174 (902)
T ss_dssp EECCT--TCSEEEEEETTSCEEEEETTTTEEEEEE--ECCHHHHHTCSSSCCCCCCEEE-EETTEEEEEEEEC----SSC
T ss_pred EEECC--CCCEEEEEcCCCcEEEEECCCCccccce--eccccccccccccCCCCeEEEE-EccCCCCEEEEEe----CCC
Confidence 34455 7788999999999999999987642100 0000000 12467888999999 9995 45666544 445
Q ss_pred eEEEEEcCCCceEEEEeccc------------------CCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEe----
Q 016134 154 FLHSWFCGEGLTMLAKLEGH------------------EKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSL---- 209 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h------------------~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~---- 209 (394)
.| +||+.++ +++..+..| ...|++++|+|++++|++++.|+. +||+++++.+..
T Consensus 175 ~v-lWd~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~ 252 (902)
T 2oaj_A 175 TL-TYSLVEN-EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVF 252 (902)
T ss_dssp EE-EEETTTT-EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSS
T ss_pred cE-EEECCCC-ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeec
Confidence 99 9999887 777777766 578999999999999999999999 699999887642
Q ss_pred --cC-------------CCCcEEEEEEc----CC---EEEEEecCC----------------------------------
Q 016134 210 --DG-------------PVGEVYSMVVA----NE---MLFAGAQDG---------------------------------- 233 (394)
Q Consensus 210 --~~-------------~~~~v~~l~~~----~~---~l~~~~~~~---------------------------------- 233 (394)
.. +...|.+++|+ |+ .+++++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~ 332 (902)
T 2oaj_A 253 ETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPK 332 (902)
T ss_dssp CSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCS
T ss_pred ccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCcc
Confidence 11 24479999994 43 456664431
Q ss_pred --------CCCCEEEEEec------------CCeEEEEeCCCeEEEEeCCCCceeEE-------EcCCCCCcE-------
Q 016134 234 --------HTRPVTCLAVG------------RSRLCSGSMDNTIRVWELDTLEPVMT-------LNDHTDAPM------- 279 (394)
Q Consensus 234 --------h~~~V~~l~~~------------~~~l~sgs~Dg~V~iwd~~~~~~~~~-------~~~h~~~v~------- 279 (394)
|...|.++.+. +..+++++.|+.|++||+.++..... +..|...|+
T Consensus 333 ~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~ 412 (902)
T 2oaj_A 333 QMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASV 412 (902)
T ss_dssp EEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEE
T ss_pred ceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEc
Confidence 23345555432 23688889999999999977643321 222333444
Q ss_pred ---------------------------EEEEc--CCEEEEEeCCCcEEEEEeCCCcee--eEee---------cccCCcc
Q 016134 280 ---------------------------SLLCW--DQFLLSCSLDHTIKVWFATGRGNL--EAAY---------THKEDNG 319 (394)
Q Consensus 280 ---------------------------~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~--~~~~---------~~~~~~~ 319 (394)
+++|+ +++|++++.|++|++||+..+... ..+. .|. ..
T Consensus 413 ~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~--~~ 490 (902)
T 2oaj_A 413 PNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKE--LA 490 (902)
T ss_dssp EHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSS--CC
T ss_pred CHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCC--Cc
Confidence 44444 679999999999999999876321 0111 122 22
Q ss_pred eEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc---------------------------------------------e
Q 016134 320 VLALGGLNDPDGKPVLICACNDNTVHLYELPSFM---------------------------------------------E 354 (394)
Q Consensus 320 ~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~---------------------------------------------~ 354 (394)
+. +++|+|+++ +||+|+.|++|+|||+.+++ +
T Consensus 491 V~--svafspdg~-~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 567 (902)
T 2oaj_A 491 VD--KISFAAETL-ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMP 567 (902)
T ss_dssp EE--EEEEETTTT-EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEE
T ss_pred ee--EEEecCCCC-eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccce
Confidence 33 445799999 99999999999999997652 2
Q ss_pred eEEEe-cCCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 355 RGRIF-SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 355 ~~~~~-~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+..+. +...|++|+|+|||+||+|+.|++|+|||+.+.
T Consensus 568 ~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~ 606 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGP 606 (902)
T ss_dssp EEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCC
Confidence 33443 367899999999999999999999999998653
No 73
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=5.4e-30 Score=248.94 Aligned_cols=260 Identities=19% Similarity=0.268 Sum_probs=204.0
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
++..+++|+.|++|++||++++.... ...+|...|.++. + ++.++++++.+| .|++||+.+
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~------------~~~~h~~~v~~l~-~--~~~~l~sg~~dg----~i~vwd~~~ 202 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKR------------ILTGHTGSVLCLQ-Y--DERVIITGSSDS----TVRVWDVNT 202 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEE------------EECCCSSCEEEEE-C--CSSEEEEEETTS----CEEEEESSS
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEE------------EEcCCCCcEEEEE-E--CCCEEEEEcCCC----eEEEEECCC
Confidence 77789999999999999998876532 3567888898888 6 567777666555 999999988
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE----EecCCCCcEEEEEEcCCEEEEEecC----
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF----SLDGPVGEVYSMVVANEMLFAGAQD---- 232 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~----~~~~~~~~v~~l~~~~~~l~~~~~~---- 232 (394)
+ +.+..+.+|...|.+++|+ +.+|++++.|+. +||++++... .+.+|...|.++.+....+++++.+
T Consensus 203 ~-~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~ 279 (435)
T 1p22_A 203 G-EMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIK 279 (435)
T ss_dssp C-CEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred C-cEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEE
Confidence 8 7889999999999999997 459999999999 6999887643 5678999999999988899988877
Q ss_pred --------------CCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEE
Q 016134 233 --------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIK 298 (394)
Q Consensus 233 --------------~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~ 298 (394)
+|...|.++.++++++++|+.|+.|++||+++++++.++.+|...|.++.+++.+|++++.|+.|+
T Consensus 280 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~ 359 (435)
T 1p22_A 280 VWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIK 359 (435)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEE
T ss_pred EEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEecCCEEEEEeCCCcEE
Confidence 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCc---------eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEE
Q 016134 299 VWFATGRG---------NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEI 369 (394)
Q Consensus 299 vwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~ 369 (394)
+||++... .+..+..|...+..+. | ++. +|++++.||.|++||+.+...........+..++.|
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~----~--~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 432 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ----F--DEF-QIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTYTY 432 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEE----E--CSS-CEEECCSSSEEEEEC---------------------
T ss_pred EEECCCCCCccccccchheeeccCCCCCeEEEE----e--CCC-EEEEEeCCCEEEEEECCCCCCcccCCCCCCccceee
Confidence 99997655 5666666665544443 3 566 799999999999999998766555554555666655
Q ss_pred CC
Q 016134 370 GP 371 (394)
Q Consensus 370 sp 371 (394)
.+
T Consensus 433 ~~ 434 (435)
T 1p22_A 433 IS 434 (435)
T ss_dssp --
T ss_pred ec
Confidence 43
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=4.1e-29 Score=232.48 Aligned_cols=253 Identities=14% Similarity=0.159 Sum_probs=209.0
Q ss_pred cceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCC
Q 016134 127 STSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204 (394)
Q Consensus 127 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~ 204 (394)
..+..++ ++|++.+++.+...+ .+.+|......+.+. ..+|...|++++|+|++++|++++ |+. +||++++
T Consensus 10 ~~v~~~~-~s~dg~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 10 KPAYSFH-VTADGQMQPVPFPPD----ALIGPGIPRHARQIN-TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EECCEEE-ECSSSCEEECCCCTT----SSSSTTCCSEEEEEE-EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTST
T ss_pred CceeEEE-ECCCCCEEEeecCCC----cEeccccCCccccce-eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCC
Confidence 4577788 999999998776544 344455544434444 448999999999999999999999 888 6999876
Q ss_pred cEE------EecCCCCcEEEEEEcCC--EEEEEecC--------------------CCCCCEEEEEec--CCeEEEEeCC
Q 016134 205 AEF------SLDGPVGEVYSMVVANE--MLFAGAQD--------------------GHTRPVTCLAVG--RSRLCSGSMD 254 (394)
Q Consensus 205 ~~~------~~~~~~~~v~~l~~~~~--~l~~~~~~--------------------~h~~~V~~l~~~--~~~l~sgs~D 254 (394)
+.. ....+...|.+++|+++ .+++++.+ .|...|.+++|+ +++|++++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 83 GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC
Confidence 532 22378899999999988 77777765 578889999997 6789999999
Q ss_pred CeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCC
Q 016134 255 NTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGK 332 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~ 332 (394)
+.|++||+++++.+..+..|...|.+++|+ +++|++++.|+.|++||+++++.+..+. +.. .+. ...|+|+++
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~--~v~--~~~~s~~~~ 237 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS--QIF--SLGYCPTGE 237 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS--CEE--EEEECTTSS
T ss_pred CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC--ceE--EEEECCCCC
Confidence 999999999999999999999999999998 7799999999999999999887766553 222 233 334799998
Q ss_pred cEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 333 PVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 333 ~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|++++.|+.|++||+++.+......+...|.+++|+|++ +|++++.|+.|++|++.+.
T Consensus 238 -~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 238 -WLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp -EEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred -EEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 8999999999999999998776555557889999999999 9999999999999998765
No 75
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.4e-29 Score=262.43 Aligned_cols=293 Identities=18% Similarity=0.195 Sum_probs=237.7
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCC
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECR 153 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~ 153 (394)
...+|++ ++.++++++.|++|++||++++.... ...+|...|+++. |+|++.++++++.+|
T Consensus 17 ~~i~~sp--~~~~la~~~~~g~v~iwd~~~~~~~~------------~~~~~~~~v~~~~-~s~~~~~l~~~~~dg---- 77 (814)
T 3mkq_A 17 KGIDFHP--TEPWVLTTLYSGRVEIWNYETQVEVR------------SIQVTETPVRAGK-FIARKNWIIVGSDDF---- 77 (814)
T ss_dssp EEEEECS--SSSEEEEEETTSEEEEEETTTTEEEE------------EEECCSSCEEEEE-EEGGGTEEEEEETTS----
T ss_pred EEEEECC--CCCEEEEEeCCCEEEEEECCCCceEE------------EEecCCCcEEEEE-EeCCCCEEEEEeCCC----
Confidence 3455666 88899999999999999998876432 3447778899999 999999999877655
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcE-E-EecCCCCcEEEEEEcC-C--EE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAE-F-SLDGPVGEVYSMVVAN-E--ML 226 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~-~-~~~~~~~~v~~l~~~~-~--~l 226 (394)
.|++||+.++ +.+..+.+|.+.|++++|+|++++|++++.|+. +||++++.. . .+..|...|.+++|+| + .+
T Consensus 78 ~i~vw~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 78 RIRVFNYNTG-EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp EEEEEETTTC-CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred eEEEEECCCC-cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 9999999887 788899999999999999999999999999998 699998733 3 5678999999999998 4 77
Q ss_pred EEEecC-------------------CCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEE
Q 016134 227 FAGAQD-------------------GHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC 283 (394)
Q Consensus 227 ~~~~~~-------------------~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~ 283 (394)
++++.+ .|...|.+++|+ +.+|++++.|+.|++||+++++++..+.+|...|.+++|
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 777766 344788999985 578999999999999999999999999999999999999
Q ss_pred c--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe--
Q 016134 284 W--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-- 359 (394)
Q Consensus 284 ~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-- 359 (394)
+ +++|++++.|+.|++||+.+++.+..+..+...... +.|+|++..++++.+.++.+.+|++........+.
T Consensus 237 ~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (814)
T 3mkq_A 237 HPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC----IATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPV 312 (814)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEE----EEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSS
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEE----EEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCC
Confidence 9 779999999999999999988888777666543332 34689987554455557789999876543222111
Q ss_pred ------------------------------------------cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 360 ------------------------------------------SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 360 ------------------------------------------~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
....+.+++|+|++ +|++++ |+.+.+|++..
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~ 386 (814)
T 3mkq_A 313 GKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALA 386 (814)
T ss_dssp SEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred CCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcc
Confidence 02246889999999 777777 89999998753
No 76
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=238.59 Aligned_cols=242 Identities=14% Similarity=0.130 Sum_probs=194.1
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC-CceEEEEecccCCCeEEEEecCC--CCEEEEEeCCCc
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE-GLTMLAKLEGHEKAVSGIALPLR--SDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~-~~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~ 197 (394)
...||...|.+++ |+|++.++++++.+| .|+|||+.. ..+.+..+.+|...|++++|+++ +++|++++.|+.
T Consensus 6 ~~~~h~~~v~~~~-~s~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 6 IANAHNELIHDAV-LDYYGKRLATCSSDK----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp CEEECCCCEEEEE-ECSSSSEEEEEETTS----CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred EecCCcccEEEEE-EcCCCCEEEEEECCC----cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 4568888999999 999999999887766 999999963 34778889999999999999977 999999999998
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCc--eeE
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLE--PVM 269 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~--~~~ 269 (394)
+||+++++..... ....|...|.+++|+ +.+|++++.|+.|++||+++.+ ...
T Consensus 81 v~iwd~~~~~~~~~~-------------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 81 VLIWKEENGRWSQIA-------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp EEEEEEETTEEEEEE-------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEE
T ss_pred EEEEEcCCCceeEee-------------------eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeE
Confidence 6999988632110 122577788888886 4689999999999999998873 455
Q ss_pred EEcCCCCCcEEEEEc---------------CCEEEEEeCCCcEEEEEeCCCcee----eEeecccCCcceEEEEeeECCC
Q 016134 270 TLNDHTDAPMSLLCW---------------DQFLLSCSLDHTIKVWFATGRGNL----EAAYTHKEDNGVLALGGLNDPD 330 (394)
Q Consensus 270 ~~~~h~~~v~~l~~~---------------~~~l~s~s~Dg~i~vwd~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~ 330 (394)
.+..|...|.++.|+ +.+|++++.|+.|++||++..... ..+..|... +. ++.|+|+
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~--v~--~~~~sp~ 217 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW--VR--DVAWSPT 217 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC--EE--EEEECCC
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc--Ee--EEEECCC
Confidence 677899999999997 368999999999999999876533 233334332 33 3346999
Q ss_pred ---CCcEEEEEeCCCeEEEEECCCCcee--EEEe----cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 331 ---GKPVLICACNDNTVHLYELPSFMER--GRIF----SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 331 ---g~~~l~sgs~dg~I~iwd~~~~~~~--~~~~----~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
+. +|++++.|+.|+|||++++... ..+. +...|++++|+|++ +|++++.||.|++|++..
T Consensus 218 ~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 218 VLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 66 9999999999999999987421 1221 35679999999999 999999999999999874
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=5.5e-31 Score=287.18 Aligned_cols=244 Identities=20% Similarity=0.275 Sum_probs=205.5
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCC
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGP 212 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~ 212 (394)
++|++.+++.++.+ +.|++||+.++ +....+.+|...|++++|+|++++|++++.|+. +||+.+++......+
T Consensus 969 ~sp~g~~l~~g~~~----g~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 1043 (1249)
T 3sfz_A 969 LSPHLEYVAFGDED----GAIKIIELPNN-RVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAH 1043 (1249)
T ss_dssp ECTTSSEEEEEETT----SCCEEEETTTT-SCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCC
T ss_pred EcCCCCEEEEEcCC----CCEEEEEcCCC-ceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecC
Confidence 44555555444433 37777777666 667788899999999999999999999999999 699999999888899
Q ss_pred CCcEEEEEEcCC-EEEEEecC------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE
Q 016134 213 VGEVYSMVVANE-MLFAGAQD------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL 271 (394)
Q Consensus 213 ~~~v~~l~~~~~-~l~~~~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 271 (394)
...|.++.++++ .+++++.+ +|...|.+++|+ +.+|++++.|++|++||+.+++++..+
T Consensus 1044 ~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A 1044 QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCC
T ss_pred CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeee
Confidence 999999999998 77777766 588999999997 678999999999999999999999999
Q ss_pred cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEe---------ecccCCcceEEEEeeECCCCCcEEEEEeC
Q 016134 272 NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAA---------YTHKEDNGVLALGGLNDPDGKPVLICACN 340 (394)
Q Consensus 272 ~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~---------~~~~~~~~~~~~~~~~s~~g~~~l~sgs~ 340 (394)
.+|...|++++|+ +++|++++.|+.|++||+.+++.+..+ ..+...+..+ .|+|+++ +|++++
T Consensus 1124 ~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l----~fs~dg~-~l~s~~- 1197 (1249)
T 3sfz_A 1124 KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDV----CFSPDSK-TLVSAG- 1197 (1249)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEE----EECTTSS-CEEEES-
T ss_pred ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEEE----EECCCCC-EEEECC-
Confidence 9999999999998 789999999999999999988766554 2233333333 4699999 777775
Q ss_pred CCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 341 DNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 341 dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
|.|++||+.+++.+..+.. ...|.+++|+|++ +|++++.||.|++|++.
T Consensus 1198 -g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1198 -GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp -SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred -CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 8999999999988777654 6679999999999 99999999999999975
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.9e-29 Score=257.16 Aligned_cols=241 Identities=18% Similarity=0.261 Sum_probs=197.3
Q ss_pred cCCCCccceeeeccccccc-cccCCCeecCCCCCeEEEEEcCCC----ceEEEEecccCCCeEEEEecCCCCEEEEEeCC
Q 016134 121 DESGDKSTSKKTTLKNVCC-HWLLGNCVRGDECRFLHSWFCGEG----LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD 195 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~-~~~~~~~~~g~~~~~i~iWd~~~~----~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D 195 (394)
...||...|++++ +++.. .++++++.++ +|++|++.+. ......+.+|...|.+++|+|++++|+||+.|
T Consensus 377 ~l~~H~~~V~~v~-~~~~~~~~l~s~s~D~----~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 377 TMRAHTDMVTAIA-TPIDNADIIVSASRDK----SIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEECCSSCEEEEE-CCTTCCSEEEEEETTS----EEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hcccCCceeEEEE-ecCCCCCEEEEEeCCC----cEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 3568999999999 88754 6777666665 9999998653 24567899999999999999999999999999
Q ss_pred Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE
Q 016134 196 GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL 271 (394)
Q Consensus 196 g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 271 (394)
++ |||+.++.... ...+|...|.+++|+ +++|++++.|++|+|||+.........
T Consensus 452 g~v~vwd~~~~~~~~---------------------~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 452 GELRLWDLAAGVSTR---------------------RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp SEEEEEETTTTEEEE---------------------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEEC
T ss_pred CcEEEEECCCCccee---------------------EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeec
Confidence 99 69999887653 112678888888887 678999999999999998754333222
Q ss_pred ---cCCCCCcEEEEEc--C--CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeE
Q 016134 272 ---NDHTDAPMSLLCW--D--QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTV 344 (394)
Q Consensus 272 ---~~h~~~v~~l~~~--~--~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I 344 (394)
.+|...|.++.|+ + ..|++++.|++|++||+++.+....+..|...+..+ .|+|+++ +|++++.|++|
T Consensus 511 ~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v----~~spdg~-~l~sg~~Dg~i 585 (694)
T 3dm0_A 511 EGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTV----AVSPDGS-LCASGGKDGVV 585 (694)
T ss_dssp SSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE----EECTTSS-EEEEEETTSBC
T ss_pred cCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEE----EEeCCCC-EEEEEeCCCeE
Confidence 4688899999998 2 589999999999999999988888777776543333 4699998 99999999999
Q ss_pred EEEECCCCceeEEEecCCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 345 HLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|||+++++.+..+.....|.+++|+|++.+++++.|+.|+|||+.+.
T Consensus 586 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 586 LLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESK 633 (694)
T ss_dssp EEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTT
T ss_pred EEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCC
Confidence 999999998887777778899999999994445556777999999764
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=7.5e-30 Score=235.40 Aligned_cols=249 Identities=16% Similarity=0.168 Sum_probs=183.2
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc--cccccCCCeecCCCCC
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV--CCHWLLGNCVRGDECR 153 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~~~~~~~~g~~~~ 153 (394)
.++++ ++.++++||.|++++|||+++....-. ....||...|.++. |++ .+.++++++.++
T Consensus 15 ~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~----------~~l~gH~~~V~~v~-~s~~~~g~~l~s~s~D~---- 77 (297)
T 2pm7_B 15 AVMDY--YGKRMATCSSDKTIKIFEVEGETHKLI----------DTLTGHEGPVWRVD-WAHPKFGTILASCSYDG---- 77 (297)
T ss_dssp EEECT--TSSEEEEEETTSCEEEEEBCSSCBCCC----------EEECCCSSCEEEEE-ECCGGGCSEEEEEETTT----
T ss_pred EEECC--CCCEEEEEeCCCEEEEEecCCCCcEEE----------EEEccccCCeEEEE-ecCCCcCCEEEEEcCCC----
Confidence 34555 788999999999999999975432111 14578999999999 865 377888777666
Q ss_pred eEEEEEcCCCc-eEEEEecccCCCeEEEEecCC--CCEEEEEeCCCc--eeecCCCc---EEEecCCCCcEEEEEEcCCE
Q 016134 154 FLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLR--SDKLFSGSRDGT--AWNIESSA---EFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 154 ~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~--vWd~~~~~---~~~~~~~~~~v~~l~~~~~~ 225 (394)
+|++||+.++. ..+..+.+|...|.+++|+|+ +.+|++++.|+. +||++++. ...+..|...|.+++|+|+.
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 99999998652 466778899999999999997 899999999998 69998763 23455666666666666541
Q ss_pred EEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCc----eeEEEcCCCCCcEEEEEcC-----CEEEEEeCCCc
Q 016134 226 LFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLE----PVMTLNDHTDAPMSLLCWD-----QFLLSCSLDHT 296 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~----~~~~~~~h~~~v~~l~~~~-----~~l~s~s~Dg~ 296 (394)
.... ..+. ..-.+.+|++|+.|++|+|||+++++ ++.++.+|...|.+++|+. .+|++++.|++
T Consensus 158 ~~~~--~~~~-----~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~ 230 (297)
T 2pm7_B 158 IEED--GEHN-----GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT 230 (297)
T ss_dssp -------------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred cccc--ccCC-----CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc
Confidence 1000 0000 00014689999999999999998766 6678899999999999983 58999999999
Q ss_pred EEEEEeCCCce--e-eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 297 IKVWFATGRGN--L-EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 297 i~vwd~~~~~~--~-~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
|++||++.... . ..+........+ ..+.|+|+++ +|++++.|++|+||+...
T Consensus 231 v~iWd~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~g~-~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 231 CIIWTQDNEQGPWKKTLLKEEKFPDVL--WRASWSLSGN-VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEEEESSTTSCCEEEESSSSCCSSCE--EEEEECSSSC-CEEEEETTSCEEEEEECT
T ss_pred EEEEEeCCCCCccceeeeecccCCCcE--EEEEECCCCC-EEEEEcCCCcEEEEEECC
Confidence 99999986431 1 122111112223 3445899999 899999999999999873
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=2.7e-29 Score=241.79 Aligned_cols=254 Identities=15% Similarity=0.142 Sum_probs=205.9
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcE
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAE 206 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~ 206 (394)
++.++ |+|++.++++++.++ .|++||..+. +....+..| ..+....|++++++|++++.|+. |||+++++.
T Consensus 59 ~~~~~-~s~~g~~l~~~~~d~----~v~i~d~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 59 GKGNT-FEKVGSHLYKARLDG----HDFLFNTIIR-DGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp CTTCE-EEEEETTEEEEEETT----EEEEEECCSE-ETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE
T ss_pred cccee-eeecCCeEEEEEcCC----cEEEEEeccc-ceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce
Confidence 44566 999999999888876 9999999775 445555556 44555678999999999999998 699999888
Q ss_pred EEe-cCCCCcEEEEEEcCC--EEEEEecC------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCC
Q 016134 207 FSL-DGPVGEVYSMVVANE--MLFAGAQD------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELD 263 (394)
Q Consensus 207 ~~~-~~~~~~v~~l~~~~~--~l~~~~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~ 263 (394)
... ..|...|.+++|+|+ .+++++.+ +|...|.+++|+ +++|++++.|++|++||++
T Consensus 132 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 132 REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 755 689999999999988 78888876 699999999997 6789999999999999999
Q ss_pred CCceeEEEcC---CCCCcEEEEE---------------------c--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCC
Q 016134 264 TLEPVMTLND---HTDAPMSLLC---------------------W--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317 (394)
Q Consensus 264 ~~~~~~~~~~---h~~~v~~l~~---------------------~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~ 317 (394)
+++++..+.. |...|.++.+ + +++|++++.|+.|++||+++++.+..+.... .
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~ 290 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF-T 290 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT-S
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc-C
Confidence 9999998875 4556666665 3 5699999999999999999887776664421 1
Q ss_pred cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce-eEEEe--cCCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME-RGRIF--SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 318 ~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~-~~~~~--~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
..+. ++.|+|++..+|++++.|+.|++||+++++. +..+. +...|.++.+.+..+|++++.|+.|++|++...
T Consensus 291 ~~v~--~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 291 CSCN--SLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp SCEE--EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred CCce--eEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 2333 3347999877899999999999999998754 44444 356788886653339999999999999998763
No 81
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=1.2e-28 Score=239.15 Aligned_cols=258 Identities=12% Similarity=0.150 Sum_probs=206.0
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc----------eEEEEecccC------------CCeEEEE
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL----------TMLAKLEGHE------------KAVSGIA 181 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~----------~~~~~l~~h~------------~~V~~l~ 181 (394)
.+...|.+++ |+|++.++++++.+| .|+|||+.++. +++..+.+|. ..|++++
T Consensus 26 ~~~~~V~~v~-~s~~g~~la~g~~dg----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 26 AEADIISTVE-FNHSGELLATGDKGG----RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp CGGGSEEEEE-ECSSSSEEEEEETTS----EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cccCcEEEEE-ECCCCCEEEEEcCCC----eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 3456899999 999999999877766 99999998653 2688999998 8899999
Q ss_pred ecCCC--CEEEEEeCCCc--eeecCCCcEE-----------------------------------------EecCCCCcE
Q 016134 182 LPLRS--DKLFSGSRDGT--AWNIESSAEF-----------------------------------------SLDGPVGEV 216 (394)
Q Consensus 182 ~s~~~--~~l~sgs~Dg~--vWd~~~~~~~-----------------------------------------~~~~~~~~v 216 (394)
|+|++ .+|++++.|+. +||+.++... ...+|...|
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99998 89999999999 6998764431 135789999
Q ss_pred EEEEEcCC--EEEEEecC--------------------------CCCCCEEEEEec--C-CeEEEEeCCCeEEEEeCCCC
Q 016134 217 YSMVVANE--MLFAGAQD--------------------------GHTRPVTCLAVG--R-SRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 217 ~~l~~~~~--~l~~~~~~--------------------------~h~~~V~~l~~~--~-~~l~sgs~Dg~V~iwd~~~~ 265 (394)
.+++|+++ .++++ .| +|...|.+++|+ + ++|++|+.|+.|++||++++
T Consensus 181 ~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 181 NSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred EEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 99999998 67666 44 477889999998 4 78999999999999999998
Q ss_pred ce----eEEEcCCCC------------CcEEEEEc--CCEEEEEeCCCcEEEEEeCC-CceeeEeecccCCcceE-----
Q 016134 266 EP----VMTLNDHTD------------APMSLLCW--DQFLLSCSLDHTIKVWFATG-RGNLEAAYTHKEDNGVL----- 321 (394)
Q Consensus 266 ~~----~~~~~~h~~------------~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~-~~~~~~~~~~~~~~~~~----- 321 (394)
+. +..+..|.. .|.+++|+ +++|++++. +.|++||++. ++.+..+..|......+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 260 ALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp SSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred ccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 87 788888876 89999999 789999998 9999999987 77777776664322100
Q ss_pred ------EEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---------------------------------CC
Q 016134 322 ------ALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---------------------------------KH 362 (394)
Q Consensus 322 ------~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---------------------------------~~ 362 (394)
.+.++|+|+++ +|++++.|+.|+|||+.+++.+....+ ..
T Consensus 339 ~~~i~~~~~~~~s~~~~-~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDS-VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp TSGGGCCCCEEECTTSS-EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred ccccccceEEEECCCCC-EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 01234699999 899999999999999998876532211 34
Q ss_pred cEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 363 EVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 363 ~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
.|..++|+|++ +|++++.++ +.+|.-.
T Consensus 418 ~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 418 KILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 58899999999 888888776 7777643
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=8.2e-30 Score=242.08 Aligned_cols=230 Identities=14% Similarity=0.074 Sum_probs=177.4
Q ss_pred cceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCC
Q 016134 127 STSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES 203 (394)
Q Consensus 127 ~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~ 203 (394)
..|.+++ ++|++.++++++.++ .|++||+.++. +++..+.+|...|++++|+|++++|++++.|+. |||+++
T Consensus 12 ~~v~~~~-~s~~g~~l~~~~~d~----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 12 KPSYEHA-FNSQRTEFVTTTATN----QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp SCCSCCE-ECSSSSEEECCCSSS----CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred CcEEEEE-ECCCCCEEEEecCCC----EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4688888 999999998776665 99999998764 678889999999999999999999999999998 699988
Q ss_pred Cc----EEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCc---eeEEEcC-
Q 016134 204 SA----EFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLE---PVMTLND- 273 (394)
Q Consensus 204 ~~----~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~---~~~~~~~- 273 (394)
++ ...+ .+|...|.+++|+ +++|++++.|+.|++||+++++ +...+..
T Consensus 87 ~~~~~~~~~~----------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 87 DGTWKQTLVL----------------------LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP 144 (377)
T ss_dssp --CCCCEEEC----------------------CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS
T ss_pred CCceeeeeEe----------------------cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc
Confidence 76 2222 2677888888886 6789999999999999999877 4778887
Q ss_pred CCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCC------------------ceeeEeecccCCcceEEEEeeECCCCCc
Q 016134 274 HTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGR------------------GNLEAAYTHKEDNGVLALGGLNDPDGKP 333 (394)
Q Consensus 274 h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~------------------~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 333 (394)
|...|.+++|+ +++|++++.|+.|++||++.. +.+..+ .|.. .+. ++.|+|+++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~v~--~~~~sp~~~- 218 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG--WVH--AVGFSPSGN- 218 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS--SEE--EEEECTTSS-
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc--eEE--EEEECCCCC-
Confidence 99999999998 789999999999999999632 222222 3332 233 335799999
Q ss_pred EEEEEeCCCeEEEEECCCCce----eEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 334 VLICACNDNTVHLYELPSFME----RGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 334 ~l~sgs~dg~I~iwd~~~~~~----~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
+|++++.|+.|+|||+.+++. +..+.. ...|.+++|+|++ +|++++.|+.+ +|+..
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 899999999999999999876 444443 6679999999999 88887766655 77665
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=8.7e-28 Score=234.73 Aligned_cols=235 Identities=21% Similarity=0.294 Sum_probs=195.1
Q ss_pred CCCCccce-eeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--e
Q 016134 122 ESGDKSTS-KKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--A 198 (394)
Q Consensus 122 ~~g~~~~v-~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--v 198 (394)
..||...+ .++. +++.++++++.+| .|++||+.++ +.+..+.+|.+.|++++|++++ +|++|+.|++ +
T Consensus 117 l~~h~~~v~~~~~---~~~~~l~sgs~dg----~i~vwd~~~~-~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~v 187 (464)
T 3v7d_B 117 LRGHMTSVITCLQ---FEDNYVITGADDK----MIRVYDSINK-KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRV 187 (464)
T ss_dssp EECCSSSCEEEEE---EETTEEEEEETTS----CEEEEETTTT-EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEE
T ss_pred EcCCCCCcEEEEE---ECCCEEEEEcCCC----cEEEEECCCC-cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEE
Confidence 45666554 4443 4566777666655 9999999887 8899999999999999999988 9999999999 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCc--------
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLE-------- 266 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~-------- 266 (394)
||+++++.... ..+|...|.+++|. +.+|++++.|++|++||+++.+
T Consensus 188 wd~~~~~~~~~---------------------~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 188 WDIKKGCCTHV---------------------FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp EETTTTEEEEE---------------------ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------
T ss_pred EECCCCcEEEE---------------------ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 99999876531 22577777777775 4689999999999999998765
Q ss_pred ---------------eeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCC
Q 016134 267 ---------------PVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDG 331 (394)
Q Consensus 267 ---------------~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g 331 (394)
.+..+.+|...|.++...+++|++++.|+.|++||+++.+.+..+..|......+ .|+|++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~----~~~~~~ 322 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYST----IYDHER 322 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE----EEETTT
T ss_pred CCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEE----EEcCCC
Confidence 2556788999999998889999999999999999999998888887766543333 368999
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 332 KPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 332 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ +|++++.|+.|++||+++++.+..+.. ...|.+++|++ .+|++++.||.|++||+.+.
T Consensus 323 ~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 323 K-RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTC
T ss_pred C-EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCC
Confidence 8 899999999999999999998888765 67799999984 39999999999999999864
No 84
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.6e-28 Score=229.43 Aligned_cols=240 Identities=13% Similarity=0.098 Sum_probs=195.6
Q ss_pred CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc--eEEEEecccCCCeEEEEecCCCC-EEEEEeCCCc-
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL--TMLAKLEGHEKAVSGIALPLRSD-KLFSGSRDGT- 197 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~--~~~~~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~- 197 (394)
..+|...|.+++ |+|++.++++++.++ .|++|++.++. .....+.+|...|++++|+|+++ +|++++.|+.
T Consensus 7 ~~~h~~~v~~~~-~s~~~~~l~~~~~d~----~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 7 EQAPKDYISDIK-IIPSKSLLLITSWDG----SLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81 (342)
T ss_dssp SSCCSSCEEEEE-EEGGGTEEEEEETTS----EEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred ccCCCCcEEEEE-EcCCCCEEEEEcCCC----eEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE
Confidence 457888999999 999999998777665 99999997653 24556679999999999999999 9999999999
Q ss_pred -eeec-CCCcEEEecCCCCcEEEEEEcCCEEEEEecCC--CCCCEEEEEec-CCeEEEEeCCCeEEEEeCCC--------
Q 016134 198 -AWNI-ESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG--HTRPVTCLAVG-RSRLCSGSMDNTIRVWELDT-------- 264 (394)
Q Consensus 198 -vWd~-~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~--h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~-------- 264 (394)
+||+ ++++...+. + |...|.+++|+ +++|++++.|+.|++||+++
T Consensus 82 ~~wd~~~~~~~~~~~----------------------~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 82 LKVDLIGSPSFQALT----------------------NNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EEECSSSSSSEEECB----------------------SCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EEEEeccCCceEecc----------------------ccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccc
Confidence 6999 887764433 4 77888888887 78999999999999999987
Q ss_pred -CceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCC-CceeeEeecccCCcceEEEEeeECC-CCCcEEEEEeCC
Q 016134 265 -LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATG-RGNLEAAYTHKEDNGVLALGGLNDP-DGKPVLICACND 341 (394)
Q Consensus 265 -~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs~d 341 (394)
++++..+. |...|.+++|+++.|++++.|+.|++||++. ...............+. ++.|+| +++ +|++++.|
T Consensus 140 ~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~--~i~~~~~~~~-~l~~~~~d 215 (342)
T 1yfq_A 140 KNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIR--DVALLPKEQE-GYACSSID 215 (342)
T ss_dssp EESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEE--EEEECSGGGC-EEEEEETT
T ss_pred cCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCcee--EEEECCCCCC-EEEEEecC
Confidence 77777776 8899999999977799999999999999987 54332222222222333 334799 888 89999999
Q ss_pred CeEEEEECCCC------ceeEEEec-CC---------cEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 342 NTVHLYELPSF------MERGRIFS-KH---------EVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 342 g~I~iwd~~~~------~~~~~~~~-~~---------~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+.|++|++... +....+.. .. .|.+++|+|++ +|++++.||.|++||+.+.
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccH
Confidence 99999999876 55555543 22 89999999999 9999999999999999764
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=6.3e-28 Score=251.64 Aligned_cols=260 Identities=18% Similarity=0.293 Sum_probs=224.4
Q ss_pred CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--ee
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AW 199 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vW 199 (394)
..+|...|++++ |+|++.+++++..+| .|+|||+.++ +.+..+.+|...|++++|+|++++|++++.|+. ||
T Consensus 9 ~~~h~~~v~~i~-~sp~~~~la~~~~~g----~v~iwd~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 9 FSNRSDRVKGID-FHPTEPWVLTTLYSG----RVEIWNYETQ-VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEECSCEEEEE-ECSSSSEEEEEETTS----EEEEEETTTT-EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred eecCCCceEEEE-ECCCCCEEEEEeCCC----EEEEEECCCC-ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 457778999999 999999999887665 9999999887 788999999999999999999999999999998 69
Q ss_pred ecCCCcEE-EecCCCCcEEEEEEcCC--EEEEEecC-------------------CCCCCEEEEEecC---CeEEEEeCC
Q 016134 200 NIESSAEF-SLDGPVGEVYSMVVANE--MLFAGAQD-------------------GHTRPVTCLAVGR---SRLCSGSMD 254 (394)
Q Consensus 200 d~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~~-------------------~h~~~V~~l~~~~---~~l~sgs~D 254 (394)
|+.+++.+ .+..|...|.+++|+|+ .+++++.+ +|...|.+++|++ +.|++++.|
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 99999876 67789999999999998 78888766 6889999999974 689999999
Q ss_pred CeEEEEeCCCCceeEEEcCCC-CCcEEEEEc----CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECC
Q 016134 255 NTIRVWELDTLEPVMTLNDHT-DAPMSLLCW----DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~-~~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
+.|++||+++++....+..+. ..+.+++|+ +.+|++++.|+.|++||+++++.+..+..+......+ .|+|
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~----~~~~ 238 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFA----VFHP 238 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEE----EECS
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEE----EEcC
Confidence 999999999888887777655 889999995 6799999999999999999988888777665443333 4699
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEEEeCCCC
Q 016134 330 DGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 330 ~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~~ 392 (394)
++. +|++++.|+.|++||+.+++.+..+.. ...+.+++|+|++ .+++.+.|+.+.+|++...
T Consensus 239 ~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 239 TLP-IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp SSS-EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred CCC-EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 999 999999999999999999988887765 5789999999998 3455556777899987653
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.8e-28 Score=237.23 Aligned_cols=257 Identities=19% Similarity=0.216 Sum_probs=205.3
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCC
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECR 153 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~ 153 (394)
+.++|+. .+ +++.+.|++|+|||++++.....- ...+|...|++++ |+|++.++++++.+|
T Consensus 109 ~~l~wS~--~n--~lAvgld~tV~lWd~~tg~~~~~~----------~~~~~~~~V~sv~-fspdg~~lasgs~Dg---- 169 (420)
T 4gga_A 109 NLVDWSS--GN--VLAVALDNSVYLWSASSGDILQLL----------QMEQPGEYISSVA-WIKEGNYLAVGTSSA---- 169 (420)
T ss_dssp BCEEECT--TS--EEEEEETTEEEEEETTTCCEEEEE----------ECCSTTCCEEEEE-ECTTSSEEEEEETTS----
T ss_pred eeEEECC--CC--EEEEEeCCEEEEEECCCCCEEEEE----------EecCCCCcEEEEE-ECCCCCEEEEEECCC----
Confidence 3456664 33 344456999999999998754311 2446777899999 999999999877666
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE--EecCCCCcEEEEEEcCC--EEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF--SLDGPVGEVYSMVVANE--MLF 227 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~--~~~~~~~~v~~l~~~~~--~l~ 227 (394)
.|+|||+.++ +.+..+.+|...|.+++++ +.+|++|+.|+. +||....... .+.+|...+..+.+.++ .++
T Consensus 170 ~v~iWd~~~~-~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~ 246 (420)
T 4gga_A 170 EVQLWDVQQQ-KRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 246 (420)
T ss_dssp CEEEEETTTT-EEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred eEEEEEcCCC-cEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeee
Confidence 9999999988 8899999999999998875 679999999999 5888765443 67889999999999987 777
Q ss_pred EEecC----------------------CCCCCEEEEEec---CCeEEE--EeCCCeEEEEeCCCCceeEEEcCCCCCcEE
Q 016134 228 AGAQD----------------------GHTRPVTCLAVG---RSRLCS--GSMDNTIRVWELDTLEPVMTLNDHTDAPMS 280 (394)
Q Consensus 228 ~~~~~----------------------~h~~~V~~l~~~---~~~l~s--gs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~ 280 (394)
++..| .|...|.+++|+ ..++++ |+.|++|++||+++++++..+..| ..+.+
T Consensus 247 s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~ 325 (420)
T 4gga_A 247 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCS 325 (420)
T ss_dssp EEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEE
T ss_pred eeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceee
Confidence 77765 578899999997 456655 458999999999999999988855 56788
Q ss_pred EEEc--CCEEEEEe--CCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeE
Q 016134 281 LLCW--DQFLLSCS--LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERG 356 (394)
Q Consensus 281 l~~~--~~~l~s~s--~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~ 356 (394)
+.|. ++.+++++ .|+.|+|||+.+++.+..+..|...+..+ +|+|+|+ +|++|+.|++|+|||+....+..
T Consensus 326 ~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l----~~spdg~-~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 326 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL----TMSPDGA-TVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE----EECTTSS-CEEEEETTTEEEEECCSCSSCC-
T ss_pred eeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEE----EEcCCCC-EEEEEecCCeEEEEECCCCCccc
Confidence 8887 67777665 79999999999999999988877544333 4699999 89999999999999998765444
Q ss_pred EE
Q 016134 357 RI 358 (394)
Q Consensus 357 ~~ 358 (394)
..
T Consensus 401 ~~ 402 (420)
T 4gga_A 401 RR 402 (420)
T ss_dssp --
T ss_pred hh
Confidence 33
No 87
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=8.2e-28 Score=226.21 Aligned_cols=261 Identities=12% Similarity=0.125 Sum_probs=205.0
Q ss_pred cCCCCccceeeecccccc---ccccCCCeecCCCCCeEEEEEcCC-CceEEEEecccCCCeEEEEecCCCCEEEEEeCCC
Q 016134 121 DESGDKSTSKKTTLKNVC---CHWLLGNCVRGDECRFLHSWFCGE-GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG 196 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~---~~~~~~~~~~g~~~~~i~iWd~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg 196 (394)
...+|...|.+++ |+|+ +.++++++.+| .|++||+.+ +......+.+|...|++++|+|++++|++++.|+
T Consensus 34 ~~~~h~~~v~~~~-~~~~~~~g~~l~~~~~dg----~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 34 VTSSPDDSIGCLS-FSPPTLPGNFLIAGSWAN----DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CSSCCSSCEEEEE-ECCTTSSSEEEEEEETTS----EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eccCCCCceEEEE-EcCCCCCceEEEEECCCC----cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 4568888999999 9998 59998877766 999999987 5455588999999999999999999999999999
Q ss_pred c--eeecCCCcEEEecCCCCcEEEEEE--cCC--EEEEEecC-----------------CCCCCEEEEEecCCeEEEEeC
Q 016134 197 T--AWNIESSAEFSLDGPVGEVYSMVV--ANE--MLFAGAQD-----------------GHTRPVTCLAVGRSRLCSGSM 253 (394)
Q Consensus 197 ~--vWd~~~~~~~~~~~~~~~v~~l~~--~~~--~l~~~~~~-----------------~h~~~V~~l~~~~~~l~sgs~ 253 (394)
. +||+++++...+..|...|.+++| +++ .+++++.+ .....+.++.+....+++++.
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA 188 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC
Confidence 8 699999998888889999999999 666 67777766 123456667777788888999
Q ss_pred CCeEEEEeCCCCceeEEEc--CCCCCcEEEEEc--CC----EEEEEeCCCcEEEEEeCCC---ceeeEeecccCCc----
Q 016134 254 DNTIRVWELDTLEPVMTLN--DHTDAPMSLLCW--DQ----FLLSCSLDHTIKVWFATGR---GNLEAAYTHKEDN---- 318 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~--~h~~~v~~l~~~--~~----~l~s~s~Dg~i~vwd~~~~---~~~~~~~~~~~~~---- 318 (394)
|+.+++||++......... .+...+.++.+. .. .+++++.|+.|++||++.. ..+..+..+....
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 9999999998755433322 233344444443 33 3999999999999999876 3445555444311
Q ss_pred ------ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeC
Q 016134 319 ------GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 319 ------~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
.+. ++.|+|+++ +|++++.|+.|+|||+.+++.+..+.. ...|++++|+|++ +|++++.|+..+.|++
T Consensus 269 ~~~~~~~v~--~~~~sp~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 269 APQDIYAVN--GIAFHPVHG-TLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp CCEEECCEE--EEEECTTTC-CEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred ccccccceE--EEEEecCCC-EEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 233 345799998 899999999999999999988877765 6789999999999 9999999886555543
No 88
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=3.1e-28 Score=231.98 Aligned_cols=239 Identities=15% Similarity=0.171 Sum_probs=189.9
Q ss_pred cCCCCccceeeeccccccc-cccCCCeecCCCCCeEEEEEcCCCceEEEEe--cccCCCeEEEEecC-CCCEEEEEeCCC
Q 016134 121 DESGDKSTSKKTTLKNVCC-HWLLGNCVRGDECRFLHSWFCGEGLTMLAKL--EGHEKAVSGIALPL-RSDKLFSGSRDG 196 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~-~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l--~~h~~~V~~l~~s~-~~~~l~sgs~Dg 196 (394)
...+|...|.++. |+|++ .++++++.+| .|+|||+.++ +....+ .+|...|.+++|+| ++++|++++.|+
T Consensus 68 ~~~~h~~~v~~~~-~~~~~~~~l~s~~~dg----~i~iwd~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 68 TASPFDRRVTSLE-WHPTHPTTVAVGSKGG----DIILWDYDVQ-NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EECCCSSCEEEEE-ECSSCTTEEEEEEBTS----CEEEEETTST-TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eccCCCCCEEEEE-ECCCCCCEEEEEcCCC----eEEEEeCCCc-ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3467888999999 99998 8888887766 9999999866 333444 47999999999999 789999999999
Q ss_pred c--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 197 T--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 197 ~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
. +||+++.....+..+. .|...|.+++|+ +.+|++++.|+.|++||+ +++++..+.
T Consensus 142 ~i~iwd~~~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~ 201 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTD-------------------SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEK 201 (383)
T ss_dssp EEEEEETTSCEEEEEECCC-------------------CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred EEEEEECCCCceEEEeccC-------------------CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEec
Confidence 8 6999875444433222 556788888887 689999999999999999 578899999
Q ss_pred CCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCC----CceeeEeecccCCcceEEEEeeECC-CCCcEEEEEeCCCeE
Q 016134 273 DHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATG----RGNLEAAYTHKEDNGVLALGGLNDP-DGKPVLICACNDNTV 344 (394)
Q Consensus 273 ~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs~dg~I 344 (394)
.|...|.+++|+ ++ +|++++.|+.|++||+++ ...+..+ .+.. .+.+ +.|+| ++. +|++++.|+.|
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~--~v~~--~~~s~~~~~-~l~~~~~d~~i 275 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK--PVNA--AYFNPTDST-KLLTTDQRNEI 275 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS--CEEE--EEECTTTSC-EEEEEESSSEE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC--ceEE--EEEcCCCCC-EEEEEcCCCcE
Confidence 999999999999 55 999999999999999987 4444443 3433 3333 34699 888 89999999999
Q ss_pred EEEECCCCceeEEEec------------------CCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 345 HLYELPSFMERGRIFS------------------KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 345 ~iwd~~~~~~~~~~~~------------------~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
++||+++++....+.. ...+..++|+|++.+ +++.|+.|++||+.+.
T Consensus 276 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 276 RVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSG 340 (383)
T ss_dssp EEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTC
T ss_pred EEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCC
Confidence 9999998876555542 134555777777733 7889999999999764
No 89
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-27 Score=218.04 Aligned_cols=223 Identities=24% Similarity=0.310 Sum_probs=190.2
Q ss_pred EcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC--EEEEEecC-
Q 016134 159 FCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE--MLFAGAQD- 232 (394)
Q Consensus 159 d~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~--~l~~~~~~- 232 (394)
|..++.++..++.+|.+.|++++| +++++|++++.|+. +||+++++.. .+..+...|.+++|+++ .+++++.+
T Consensus 3 d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 3 DPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp --CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred CccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 445667899999999999999999 99999999999998 6999888766 56778999999999998 78887766
Q ss_pred --------------------CCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc---CCEEE
Q 016134 233 --------------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW---DQFLL 289 (394)
Q Consensus 233 --------------------~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~---~~~l~ 289 (394)
+|...|.++.|++++|++++.|+.|++|| .++.+..+..|...+.++.+. +++|+
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 58899999999999999999999999999 678888899999999999986 78999
Q ss_pred EEeCCCcEEEEEeCCCceeeEeec-ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEE
Q 016134 290 SCSLDHTIKVWFATGRGNLEAAYT-HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVI 367 (394)
Q Consensus 290 s~s~Dg~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l 367 (394)
+++.|+.|++||. .+....+.. +.. .+.++ .++|++. |++++.|+.|++||+++++.+..+.. ...|+++
T Consensus 160 ~~~~d~~i~i~d~--~~~~~~~~~~~~~--~i~~~--~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 160 TASADKTIKLWQN--DKVIKTFSGIHND--VVRHL--AVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EEETTSCEEEEET--TEEEEEECSSCSS--CEEEE--EEEETTE--EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EEECCCCEEEEec--CceEEEEeccCcc--cEEEE--EEcCCCe--EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE
Confidence 9999999999993 344444443 332 23333 3578876 78899999999999999988888764 7789999
Q ss_pred EECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 368 EIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 368 ~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|+|++.|++++.|+.|++||+.+.
T Consensus 232 ~~~~~~~l~~~~~dg~v~iwd~~~~ 256 (313)
T 3odt_A 232 KLLPNGDIVSCGEDRTVRIWSKENG 256 (313)
T ss_dssp EECTTSCEEEEETTSEEEEECTTTC
T ss_pred EEecCCCEEEEecCCEEEEEECCCC
Confidence 9999999999999999999998764
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=231.10 Aligned_cols=256 Identities=12% Similarity=0.085 Sum_probs=192.4
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcC-
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCG- 161 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~- 161 (394)
++..+++|+.|++|++||++++...... . ...|.++. +.|. .++++.|++|++|+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~-----------~---~~~v~~~~-~~~~-------~~s~s~D~~i~~w~~~~ 104 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTI-----------T---TPNPRTGG-EHPA-------IISRGPCNRLLLLYPGN 104 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEE-----------E---EECCCTTC-CCCS-------EEEECSTTEEEEEETTT
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEE-----------e---cCCceeee-eCCc-------eEEecCCCeEEEEEccC
Confidence 7778999999999999999987753211 0 23455555 6665 5566777799999765
Q ss_pred --------CCceEEEEe-cccCCCeEEEEecC--CCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEE
Q 016134 162 --------EGLTMLAKL-EGHEKAVSGIALPL--RSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFA 228 (394)
Q Consensus 162 --------~~~~~~~~l-~~h~~~V~~l~~s~--~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~ 228 (394)
++ +.++.+ .+|.+.|.+++|+| ++++|++++.|+. +||+++++......
T Consensus 105 ~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~----------------- 166 (343)
T 3lrv_A 105 QITILDSKTN-KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS----------------- 166 (343)
T ss_dssp EEEEEETTTC-CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-----------------
T ss_pred ceEEeecCCc-ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-----------------
Confidence 33 323333 47889999999999 9999999999999 69999988754321
Q ss_pred EecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCcee-EEEcC-CCCCcEEEEEc--CCEEEEEeCCCcEEEEEe
Q 016134 229 GAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPV-MTLND-HTDAPMSLLCW--DQFLLSCSLDHTIKVWFA 302 (394)
Q Consensus 229 ~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~-~~~~~-h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~ 302 (394)
..|...|.+++|+ +.+|++|+.|+.|+|||+++++.+ ..+.. |...|.+++|+ +.+|++++ |+.|++||+
T Consensus 167 ---~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 167 ---AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp ---CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred ---cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 1344567788886 678999999999999999999987 88888 99999999998 78999999 459999999
Q ss_pred CCCceeeEeeccc---CCcceEEEEeeECCCCCcEEEEEeC-CCeEEEEECCCCceeEEEecCCcEEEEEECC---CC-E
Q 016134 303 TGRGNLEAAYTHK---EDNGVLALGGLNDPDGKPVLICACN-DNTVHLYELPSFMERGRIFSKHEVRVIEIGP---DK-L 374 (394)
Q Consensus 303 ~~~~~~~~~~~~~---~~~~~~~~~~~~s~~g~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp---~~-~ 374 (394)
++.+.+..+..+. ..... .++.|+|+++ +|++++. |+.|+||++......... .++..++|.+ +. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~-~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 316 (343)
T 3lrv_A 243 RKDVGTLAYPTYTIPEFKTGT--VTYDIDDSGK-NMIAYSNESNSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTD 316 (343)
T ss_dssp TSSTTCBSSCCCBC-----CC--EEEEECTTSS-EEEEEETTTTEEEEEEECTTTCSEEE---EEEEECCC----CCCCE
T ss_pred CCCCcceeecccccccccccc--eEEEECCCCC-EEEEecCCCCcEEEEEEcccccceEe---cCceeEecCccccccce
Confidence 9887665544321 11221 2345799999 8888887 999999999766543333 5677888888 66 8
Q ss_pred EEEEeCCCeEEEEe
Q 016134 375 FFTGDGAGMLGVWK 388 (394)
Q Consensus 375 l~tgs~Dg~I~vWd 388 (394)
|++++.|+.+.++-
T Consensus 317 l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 317 MDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEEEETTEEEEEE
T ss_pred eEEEecCCceEEEE
Confidence 88899999888874
No 91
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.7e-29 Score=235.10 Aligned_cols=251 Identities=17% Similarity=0.175 Sum_probs=183.1
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc--cccccCCCeecCCCCC
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV--CCHWLLGNCVRGDECR 153 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~~~~~~~~g~~~~ 153 (394)
.++++ ++..+++||.|++++|||++++.... .....||...|.+++ |++ .+.++++++.++
T Consensus 19 v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~----------~~~l~gH~~~V~~v~-~~~~~~~~~l~s~s~D~---- 81 (316)
T 3bg1_A 19 AQMDY--YGTRLATCSSDRSVKIFDVRNGGQIL----------IADLRGHEGPVWQVA-WAHPMYGNILASCSYDR---- 81 (316)
T ss_dssp EEECG--GGCEEEEEETTTEEEEEEEETTEEEE----------EEEEECCSSCEEEEE-ECCGGGSSCEEEEETTS----
T ss_pred eeEcC--CCCEEEEEeCCCeEEEEEecCCCcEE----------EEEEcCCCccEEEEE-eCCCCCCCEEEEEECCC----
Confidence 44555 78899999999999999998764211 013568888999999 864 477888776665
Q ss_pred eEEEEEcCCC-ceEEEEecccCCCeEEEEecCC--CCEEEEEeCCCc--eeecCCCcEE----EecCCCCcEEEEEEcCC
Q 016134 154 FLHSWFCGEG-LTMLAKLEGHEKAVSGIALPLR--SDKLFSGSRDGT--AWNIESSAEF----SLDGPVGEVYSMVVANE 224 (394)
Q Consensus 154 ~i~iWd~~~~-~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~--vWd~~~~~~~----~~~~~~~~v~~l~~~~~ 224 (394)
+|++||+.++ .+.+..+.+|...|++++|+|+ +.+|++++.|+. +||++.+... .+..|...|.++.|+|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 9999999875 2567788999999999999997 789999999999 6999876422 23456666777777665
Q ss_pred EEEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCC---ceeEEEcCCCCCcEEEEEc--C----CEEEEEeCCC
Q 016134 225 MLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTL---EPVMTLNDHTDAPMSLLCW--D----QFLLSCSLDH 295 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~---~~~~~~~~h~~~v~~l~~~--~----~~l~s~s~Dg 295 (394)
... +....+...- ..-.+.+|++|+.|++|+|||++.. +++..+.+|...|.+++|+ + .+|++++.|+
T Consensus 162 ~~~-~~~~~~~~~~--~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 162 VVP-GSLIDHPSGQ--KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCC-------CCSC--CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cCC-cccccccccc--CccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 110 0000000000 0001368999999999999999754 4677889999999999998 2 6899999999
Q ss_pred cEEEEEeCCCc----eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 296 TIKVWFATGRG----NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 296 ~i~vwd~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
+|++||++... ....+..+.. .+. .+.|+|++. +|++++.|++|+||+...
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~--~v~--~v~~sp~g~-~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFND--VVW--HVSWSITAN-ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSS--CEE--EEEECTTTC-CEEEEESSSCEEEEEECT
T ss_pred eEEEEEccCccccchhhhhhhcCCC--cEE--EEEEcCCCC-EEEEEcCCCeEEEEEECC
Confidence 99999987621 1222333332 333 345799998 899999999999999763
No 92
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=1.6e-27 Score=219.82 Aligned_cols=234 Identities=11% Similarity=0.023 Sum_probs=173.2
Q ss_pred eEEEEEcCCCc--eEEEEecccCC-------------------------CeEEEEecCC----CCEEEEEeCCCceeecC
Q 016134 154 FLHSWFCGEGL--TMLAKLEGHEK-------------------------AVSGIALPLR----SDKLFSGSRDGTAWNIE 202 (394)
Q Consensus 154 ~i~iWd~~~~~--~~~~~l~~h~~-------------------------~V~~l~~s~~----~~~l~sgs~Dg~vWd~~ 202 (394)
.|++|+..++. ++++++++|+. .|.+|+|+|+ ++.+++++.+..+|++.
T Consensus 64 ~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~ 143 (356)
T 2w18_A 64 VVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLT 143 (356)
T ss_dssp EEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEET
T ss_pred eEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEecC
Confidence 79999998763 78889988875 4556667777 88888888777799999
Q ss_pred CCcEEEe--cCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec-----CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC
Q 016134 203 SSAEFSL--DGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-----RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275 (394)
Q Consensus 203 ~~~~~~~--~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-----~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~ 275 (394)
+++.+.. .+|...|..++++++--......+|...+..++|+ +.+|++++.|++|+|||++++++++++.+|.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 8888744 67999999999999722222333666666666664 4899999999999999999999999998754
Q ss_pred ---CCcEEEEEc--CCEE------------EEEeCCCcEEEEEeCCCceeeEeecc-cCCcceEEEEeeECCCCCcEEEE
Q 016134 276 ---DAPMSLLCW--DQFL------------LSCSLDHTIKVWFATGRGNLEAAYTH-KEDNGVLALGGLNDPDGKPVLIC 337 (394)
Q Consensus 276 ---~~v~~l~~~--~~~l------------~s~s~Dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~g~~~l~s 337 (394)
..+.+++|+ +.++ ++|+.|++|++||..+++.+..+... ........+...+ ++. ++++
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~-~lAS 300 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDH-CAAA 300 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETT-EEEE
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCC-EEEE
Confidence 357777777 5544 67889999999999988776654211 1011111222222 355 8999
Q ss_pred EeCCCeEEEEECCCCceeEEEec-CCc-EEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 338 ACNDNTVHLYELPSFMERGRIFS-KHE-VRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 338 gs~dg~I~iwd~~~~~~~~~~~~-~~~-v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
++.|++|+|||+.+++.+.++.. ... +.+++|+||+ +|++|+.|++|+|||+.
T Consensus 301 gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 99999999999999999999874 333 4568999999 99999999999999963
No 93
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=6.3e-28 Score=225.45 Aligned_cols=264 Identities=14% Similarity=0.029 Sum_probs=210.7
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccccc-ccCCCeecCCCC
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCH-WLLGNCVRGDEC 152 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~-~~~~~~~~g~~~ 152 (394)
...+|++ ++..+++++.|+++++|+++++...... ....+|...|.++. ++|++. ++++++.+|
T Consensus 15 ~~~~~s~--~~~~l~~~~~d~~v~iw~~~~~~~~~~~---------~~~~~~~~~v~~~~-~~~~~~~~l~~~~~dg--- 79 (342)
T 1yfq_A 15 SDIKIIP--SKSLLLITSWDGSLTVYKFDIQAKNVDL---------LQSLRYKHPLLCCN-FIDNTDLQIYVGTVQG--- 79 (342)
T ss_dssp EEEEEEG--GGTEEEEEETTSEEEEEEEETTTTEEEE---------EEEEECSSCEEEEE-EEESSSEEEEEEETTS---
T ss_pred EEEEEcC--CCCEEEEEcCCCeEEEEEeCCCCccccc---------eeeeecCCceEEEE-ECCCCCcEEEEEcCCC---
Confidence 3455666 7778999999999999999977621100 12347778999999 999999 888777665
Q ss_pred CeEEEEEc-CCCceEEEEecc--cCCCeEEEEecCCCCEEEEEeCCCc--eeecCC---------CcEEEecCCCCcEEE
Q 016134 153 RFLHSWFC-GEGLTMLAKLEG--HEKAVSGIALPLRSDKLFSGSRDGT--AWNIES---------SAEFSLDGPVGEVYS 218 (394)
Q Consensus 153 ~~i~iWd~-~~~~~~~~~l~~--h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~---------~~~~~~~~~~~~v~~ 218 (394)
.|++||+ .++ + ...+.+ |...|.+++|+| +++|++++.|+. +||+++ ++.+..
T Consensus 80 -~i~~wd~~~~~-~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--------- 146 (342)
T 1yfq_A 80 -EILKVDLIGSP-S-FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN--------- 146 (342)
T ss_dssp -CEEEECSSSSS-S-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS---------
T ss_pred -eEEEEEeccCC-c-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE---------
Confidence 9999999 776 3 377888 999999999999 999999999998 699875 332211
Q ss_pred EEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCC-Cc--eeEEEcCCCCCcEEEEEc---CCEEEEEe
Q 016134 219 MVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDT-LE--PVMTLNDHTDAPMSLLCW---DQFLLSCS 292 (394)
Q Consensus 219 l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~-~~--~~~~~~~h~~~v~~l~~~---~~~l~s~s 292 (394)
. .|...|.+++|+++.+++++.|+.|++||+++ ++ .......|...|.+++|+ +++|++++
T Consensus 147 ------------~-~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 147 ------------T-KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp ------------S-SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred ------------E-eeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 1 36778889999877799999999999999988 54 334455688899999997 57999999
Q ss_pred CCCcEEEEEeCCC------ceeeEeecccC-------CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe
Q 016134 293 LDHTIKVWFATGR------GNLEAAYTHKE-------DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF 359 (394)
Q Consensus 293 ~Dg~i~vwd~~~~------~~~~~~~~~~~-------~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 359 (394)
.|+.|++||++.. +....+..+.. ...+. ++.|+|+++ +|++++.|+.|++||+.+++.+..+.
T Consensus 214 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~ 290 (342)
T 1yfq_A 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN--SIEFSPRHK-FLYTAGSDGIISCWNLQTRKKIKNFA 290 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE--EEEECTTTC-CEEEEETTSCEEEEETTTTEEEEECC
T ss_pred cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEE--EEEEcCCCC-EEEEecCCceEEEEcCccHhHhhhhh
Confidence 9999999999876 66666666543 11333 335799998 89999999999999999998887776
Q ss_pred c--CCcEEEEEECCCC-EEEEEeCCCe
Q 016134 360 S--KHEVRVIEIGPDK-LFFTGDGAGM 383 (394)
Q Consensus 360 ~--~~~v~~l~~sp~~-~l~tgs~Dg~ 383 (394)
. ...|++++ |++ +|++++.||.
T Consensus 291 ~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 291 KFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cccCCCceEec--CCCCeEEEEecCCc
Confidence 4 56799999 888 9999999998
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=4.6e-28 Score=235.41 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=182.3
Q ss_pred CCCccceeeecccccc-ccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecC-CCCEEEEEeCCCc--
Q 016134 123 SGDKSTSKKTTLKNVC-CHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPL-RSDKLFSGSRDGT-- 197 (394)
Q Consensus 123 ~g~~~~v~~~~~~~~~-~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~-- 197 (394)
.+|...|++++ |+|. ..+||+++.+| .|+|||+.++. .....+.+|.+.|++|+|+| ++++|+|++.|++
T Consensus 116 ~~~~~~V~~l~-~~P~~~~~lasGs~dg----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 116 APFDRRATSLA-WHPTHPSTVAVGSKGG----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp EECSSCEEEEE-ECSSCTTCEEEEETTS----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred CCCCCCEEEEE-EeCCCCCEEEEEeCCC----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 46677899999 9984 56777766666 99999997553 45566789999999999998 6899999999999
Q ss_pred eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC
Q 016134 198 AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275 (394)
Q Consensus 198 vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~ 275 (394)
|||++++....+..+ +.+...+.+++|+ +.+|++|+.|+.|++||++ ++++..+.+|.
T Consensus 191 iwd~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~ 250 (435)
T 4e54_B 191 LQDFKGNILRVFASS-------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHK 250 (435)
T ss_dssp EEETTSCEEEEEECC-------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCS
T ss_pred EeeccCCceeEEecc-------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEeccc
Confidence 699987655433221 1445566777876 6799999999999999997 46677889999
Q ss_pred CCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceeeEeeccc-CCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 276 DAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK-EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 276 ~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
..|.+++|+ ..+|++++.|+.|++||+++.+....+.... +...+. +++|+|++. +|++++.|+.|+|||+.+
T Consensus 251 ~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~--~~~~spdg~-~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 251 KKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVN--AACFSPDGA-RLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp SCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEE--ECCBCTTSS-EEEEEESSSCEEEEESSS
T ss_pred ceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccc--ceeECCCCC-eeEEEcCCCEEEEEECCC
Confidence 999999998 3489999999999999998766544432211 112233 345799999 899999999999999999
Q ss_pred CceeEEEec-C------CcEEEEEECCCC-EEEEEe------------CCCeEEEEeCCCC
Q 016134 352 FMERGRIFS-K------HEVRVIEIGPDK-LFFTGD------------GAGMLGVWKLLAK 392 (394)
Q Consensus 352 ~~~~~~~~~-~------~~v~~l~~sp~~-~l~tgs------------~Dg~I~vWd~~~~ 392 (394)
+.....+.. . ..+..+.|+|++ +++++. .++.|++||+.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g 388 (435)
T 4e54_B 328 WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSG 388 (435)
T ss_dssp SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSC
T ss_pred CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCC
Confidence 877665542 1 123344566666 444443 3467999998764
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=1.3e-27 Score=231.94 Aligned_cols=247 Identities=17% Similarity=0.226 Sum_probs=194.6
Q ss_pred CCCCccceeeecccccc-ccccCCCeecCCCCCeEEEEEcCCC---------ceEEEEecccCCCeEEEEecCCCC-EEE
Q 016134 122 ESGDKSTSKKTTLKNVC-CHWLLGNCVRGDECRFLHSWFCGEG---------LTMLAKLEGHEKAVSGIALPLRSD-KLF 190 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~-~~~~~~~~~~g~~~~~i~iWd~~~~---------~~~~~~l~~h~~~V~~l~~s~~~~-~l~ 190 (394)
..+|...|..++ ++|. ..++++++.+| .|++||+.+. ..++..+.+|...|++|+|+|++. +|+
T Consensus 124 ~~~h~~~v~~l~-~~p~~~~~lat~~~dg----~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 124 KINHEGEVNRAR-YMPQNACVIATKTPSS----DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEESSCCSEEE-EETTEEEEEEEECSSS----CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEcCCCcEEEEE-ECCCCCcEEEEECCCC----cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 346778899998 9986 67787766655 8999999752 477888999999999999999988 999
Q ss_pred EEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCC
Q 016134 191 SGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 191 sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~ 265 (394)
+++.||. +||+..+.... .+. .+ .....+|...|.+++|+ +.+|++++.|+.|++||+++.
T Consensus 199 s~~~dg~i~vwd~~~~~~~~------~~~----~~----~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEH------RVI----DA----KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp EECTTSCEEEEETTSCCBGG------GEE----EC----SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred EEeCCCeEEEEeCCCCCCCC------cee----cc----ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999 69998743210 000 00 00122788889999986 568999999999999999987
Q ss_pred ---ceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCC-CceeeEeecccCCcceEEEEeeECCCCCcEEEEE
Q 016134 266 ---EPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATG-RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICA 338 (394)
Q Consensus 266 ---~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sg 338 (394)
+++..+..|...|.+++|+ +. +|++++.|+.|++||++. ...+..+..|...+. ++.|+|+++.+|+++
T Consensus 265 ~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~----~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 265 NTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIF----QVQWSPHNETILASS 340 (430)
T ss_dssp CSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEE----EEEECSSCTTEEEEE
T ss_pred CCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEE----EEEECCCCCCEEEEE
Confidence 5788888999999999998 44 799999999999999997 445666665654333 334699997789999
Q ss_pred eCCCeEEEEECCCC--------------ceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEEEeCCC
Q 016134 339 CNDNTVHLYELPSF--------------MERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 339 s~dg~I~iwd~~~~--------------~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~ 391 (394)
+.|+.|+|||+... ..+..+.. ...|++++|+|++ +|++++.|+.|+||++..
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 99999999999872 33333332 5579999999998 899999999999999863
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.7e-27 Score=226.45 Aligned_cols=251 Identities=21% Similarity=0.274 Sum_probs=201.1
Q ss_pred ccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCC
Q 016134 84 NLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG 163 (394)
Q Consensus 84 ~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~ 163 (394)
+..+++++.|+++++||++++..... ...+|...|.+++ |+|++.++++++.+| .|++||+.++
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~-----------~~~~~~~~v~~v~-~s~~~~~l~~~~~dg----~i~iwd~~~~ 166 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSAL-----------AETDESTYVASVK-WSHDGSFLSVGLGNG----LVDIYDVESQ 166 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEE-----------EECCTTCCEEEEE-ECTTSSEEEEEETTS----CEEEEETTTC
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEe-----------eecCCCCCEEEEE-ECCCCCEEEEECCCC----eEEEEECcCC
Confidence 45688899999999999998875421 2334677899999 999999998877666 9999999887
Q ss_pred ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCC-CcE-EEecCCCCcEEEEEEcCC--EEEEEecC-----
Q 016134 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAE-FSLDGPVGEVYSMVVANE--MLFAGAQD----- 232 (394)
Q Consensus 164 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~-~~~-~~~~~~~~~v~~l~~~~~--~l~~~~~~----- 232 (394)
+.+..+.+|...|.+++| ++++|++++.|+. +||++. ... ..+..|...|.+++|+++ .+++++.+
T Consensus 167 -~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 167 -TKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp -CEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -eEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 788899999999999999 5679999999999 699984 333 367789999999999988 78888776
Q ss_pred -------------CCCCCEEEEEec---CCeEEEEe--CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe
Q 016134 233 -------------GHTRPVTCLAVG---RSRLCSGS--MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS 292 (394)
Q Consensus 233 -------------~h~~~V~~l~~~---~~~l~sgs--~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s 292 (394)
.|...|.+++|+ ..++++++ .|+.|++||+++++++..+. +...|.+++|+ +.+|++++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEe
Confidence 688999999997 35677765 79999999999999999886 66789999998 78888854
Q ss_pred --CCCcEEEEEeCCCceeeE--eecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe
Q 016134 293 --LDHTIKVWFATGRGNLEA--AYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF 359 (394)
Q Consensus 293 --~Dg~i~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 359 (394)
.|+.|++||+.+++.... +..|......+ .|+|++. +|++++.|+.|++|++.+++.+....
T Consensus 323 g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~----~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYS----ALSPDGR-ILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEE----EECTTSS-EEEEECTTSEEEEEECCC--------
T ss_pred ecCCCcEEEEecCCccceeEEEecCCCCCEEEE----EECCCCC-EEEEEeCCCcEEEEECCCCccccccc
Confidence 899999999998655544 33444433333 3699999 99999999999999999987765543
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.6e-27 Score=227.42 Aligned_cols=226 Identities=21% Similarity=0.264 Sum_probs=178.0
Q ss_pred CCCCeEEEEEcCCCce---EEEEecccCCCeEEEEecC-CCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcC
Q 016134 150 DECRFLHSWFCGEGLT---MLAKLEGHEKAVSGIALPL-RSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVAN 223 (394)
Q Consensus 150 ~~~~~i~iWd~~~~~~---~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~ 223 (394)
+.++.|+||++.+..+ .+..+.+|.+.|++++|+| ++++|++|+.|+. |||+.++...... ...+.
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~--~~~~~------ 125 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPL--REPVI------ 125 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCB--CSCSE------
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcccc--CCceE------
Confidence 3455999999965422 3556789999999999999 9999999999998 6999887431100 00011
Q ss_pred CEEEEEecCCCCCCEEEEEec--C-CeEEEEeCCCeEEEEeCCCCceeEEE--cCCCCCcEEEEEc--CCEEEEEeCCCc
Q 016134 224 EMLFAGAQDGHTRPVTCLAVG--R-SRLCSGSMDNTIRVWELDTLEPVMTL--NDHTDAPMSLLCW--DQFLLSCSLDHT 296 (394)
Q Consensus 224 ~~l~~~~~~~h~~~V~~l~~~--~-~~l~sgs~Dg~V~iwd~~~~~~~~~~--~~h~~~v~~l~~~--~~~l~s~s~Dg~ 296 (394)
...+|...|.+++|+ + ++|++++.|+.|+|||+++++++..+ ..|...|.+++|+ +.+|++++.|+.
T Consensus 126 ------~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 126 ------TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp ------EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred ------EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 122788889999997 3 58999999999999999999999999 8899999999998 789999999999
Q ss_pred EEEEEeCCCceeeEe-ecccCCcceEEEEeeECCCCCcEEEEE---eCCCeEEEEECCCCce-eE--EEecCCcEEEEEE
Q 016134 297 IKVWFATGRGNLEAA-YTHKEDNGVLALGGLNDPDGKPVLICA---CNDNTVHLYELPSFME-RG--RIFSKHEVRVIEI 369 (394)
Q Consensus 297 i~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~g~~~l~sg---s~dg~I~iwd~~~~~~-~~--~~~~~~~v~~l~~ 369 (394)
|++||+++++.+..+ ..+... .... +.|+|++. +|++| +.|+.|++||+++.+. +. .+.+...+.+++|
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKDRPHEGT-RPVH--AVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp EEEEETTTTEEEEEEECSSCSS-SCCE--EEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred EEEEeCCCCceeeeeccCCCCC-cceE--EEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 999999998887777 444433 1222 23689988 88888 7899999999998764 22 2234667999999
Q ss_pred CCCC-EEE-EEeCCCeEEEEeCCCCC
Q 016134 370 GPDK-LFF-TGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 370 sp~~-~l~-tgs~Dg~I~vWd~~~~~ 393 (394)
+|++ +|+ +++.|+.|++||+.+..
T Consensus 276 s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 276 DPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp ETTTTEEEEEETTCSCEEEEEECSST
T ss_pred cCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 9999 664 66689999999998653
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=3.7e-28 Score=231.93 Aligned_cols=251 Identities=17% Similarity=0.183 Sum_probs=203.7
Q ss_pred cccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccc----c---cccCCCeecCCCCCeEEE
Q 016134 85 LWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVC----C---HWLLGNCVRGDECRFLHS 157 (394)
Q Consensus 85 ~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~----~---~~~~~~~~~g~~~~~i~i 157 (394)
..+++++.|++|++||++++...... .......+|...|.++. |+++ + .++++++.+| .|++
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~~~~~~------~~~~~~~~h~~~v~~~~-~~~~~~~~g~~~~~l~s~~~dg----~i~i 95 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLDNENPK------DKSYSHFVHKSGLHHVD-VLQAIERDAFELCLVATTSFSG----DLLF 95 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGG------GGEEEEECCTTCEEEEE-EEEEEETTTEEEEEEEEEETTS----CEEE
T ss_pred CeEEEEcCCCEEEEEECCCcccccCC------CcceEEecCCCcEEEEE-EecccccCCccccEEEEEcCCC----CEEE
Confidence 67899999999999999987621100 01113447888999999 9999 8 8888777665 9999
Q ss_pred EEcCCCceE-----EEEeccc-----CCCeEEEEec----CCCCE-EEEEeCCCc--eeecCC------CcEE------E
Q 016134 158 WFCGEGLTM-----LAKLEGH-----EKAVSGIALP----LRSDK-LFSGSRDGT--AWNIES------SAEF------S 208 (394)
Q Consensus 158 Wd~~~~~~~-----~~~l~~h-----~~~V~~l~~s----~~~~~-l~sgs~Dg~--vWd~~~------~~~~------~ 208 (394)
||+.++ +. +..+..| ...|.+++|+ |++++ |++++.|+. +||+.+ ++.+ .
T Consensus 96 w~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 96 YRITRE-DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEEC-TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEccCC-cccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcce
Confidence 999766 33 7888888 5999999999 99999 999999998 699987 4332 3
Q ss_pred e-------cCCCCcEEEEEEcCC-EEEEEecC------------------C---C---CCCEEEEEec--CCeEEEEeCC
Q 016134 209 L-------DGPVGEVYSMVVANE-MLFAGAQD------------------G---H---TRPVTCLAVG--RSRLCSGSMD 254 (394)
Q Consensus 209 ~-------~~~~~~v~~l~~~~~-~l~~~~~~------------------~---h---~~~V~~l~~~--~~~l~sgs~D 254 (394)
+ ..+...|.+++|+++ .+++++.+ . | ...|.+++|+ +.+|++++.|
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred eeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 3 447888999999988 77777766 5 8 9999999997 7899999999
Q ss_pred ---CeEEEEeCCCCceeEEEcC-------------CCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEee----
Q 016134 255 ---NTIRVWELDTLEPVMTLND-------------HTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAY---- 312 (394)
Q Consensus 255 ---g~V~iwd~~~~~~~~~~~~-------------h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~---- 312 (394)
+.|++||+++++++..+.. |...|.+++|+ +++|++++.|+.|++||+++.+.+..+.
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 334 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCD 334 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccC
Confidence 9999999999999999998 99999999998 7899999999999999999998888877
Q ss_pred --cc---------------cCCcceEEEEeeECCCC----------CcEEEEEeCCCeEEEEECCCC
Q 016134 313 --TH---------------KEDNGVLALGGLNDPDG----------KPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 313 --~~---------------~~~~~~~~~~~~~s~~g----------~~~l~sgs~dg~I~iwd~~~~ 352 (394)
.+ .. .+. .+.|+|++ + +|++++.|+.|++|++.++
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~--~v~--~~~~~~~g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 335 DIEIEEDILAVDEHGDSLAEP--GVF--DVKFLKKGWRSGMGADLNE-SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp GCSSGGGCCCBCTTSCBCSSC--CEE--EEEEECTTTSBSTTCTTSC-EEEEEETTTEEEEEEEEC-
T ss_pred cccchhhhhccccccccccCC--cee--EEEeccccccccccccccc-eEEEecCCCcEEEEEcCCC
Confidence 44 32 233 33468888 5 8999999999999999875
No 99
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-27 Score=230.86 Aligned_cols=243 Identities=15% Similarity=0.054 Sum_probs=187.2
Q ss_pred CCccceeeecccccccccc-CCCeecCCCCCeEEEEEcC--CCceEEEEec--ccCCCeEEEEecCCCCEEEEEeCCCce
Q 016134 124 GDKSTSKKTTLKNVCCHWL-LGNCVRGDECRFLHSWFCG--EGLTMLAKLE--GHEKAVSGIALPLRSDKLFSGSRDGTA 198 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~-~~~~~~g~~~~~i~iWd~~--~~~~~~~~l~--~h~~~V~~l~~s~~~~~l~sgs~Dg~v 198 (394)
++...|.+++ |+|++.++ ++++.+| .|+|||+. ++ +.+..+. .|...|++++|+|++++|++++.|+.+
T Consensus 100 ~~~~~v~~~~-~s~d~~~l~~~~~~dg----~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 100 PIYSYIRNLR-LTSDESRLIACADSDK----SLLVFDVDKTSK-NVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp CCCCCEEEEE-ECTTSSEEEEEEGGGT----EEEEEEECSSSS-SCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCceEEEE-EcCCCCEEEEEECCCC----eEEEEECcCCCC-ceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 4455799999 99999996 7666555 99999998 55 5666665 677999999999999999999999984
Q ss_pred --eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCC-----eEEEEeCCCeEEEEeCCCCceeEE-
Q 016134 199 --WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRS-----RLCSGSMDNTIRVWELDTLEPVMT- 270 (394)
Q Consensus 199 --Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~-----~l~sgs~Dg~V~iwd~~~~~~~~~- 270 (394)
|++.++........ ...+|...|.+++|+++ +|++++.|++|++||+++++++..
T Consensus 174 ~~~~~~~~~~~~~~~~-----------------~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQE-----------------PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp EEEETTSCCCSSCCCC-----------------CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE
T ss_pred EEEecCCcccccccce-----------------eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee
Confidence 77766553210000 11167788888888743 899999999999999999998887
Q ss_pred EcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeeccc-----------------------CCcceEEEEee
Q 016134 271 LNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK-----------------------EDNGVLALGGL 326 (394)
Q Consensus 271 ~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~ 326 (394)
+.+|...|.+++|+ +++|++++.|++|++||+++++.+..+..+. ....+. .+.
T Consensus 237 ~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~i~ 314 (450)
T 2vdu_B 237 LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS--KII 314 (450)
T ss_dssp CCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE--EEE
T ss_pred ecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE--EEE
Confidence 55899999999997 8899999999999999999988777765321 111222 345
Q ss_pred ECCCCCcEEEEEe-CCCeEEEEEC--CCC---ceeEEEecCCcEEEEEECCCCEEEEEeC-------CCeEEEEeCCCC
Q 016134 327 NDPDGKPVLICAC-NDNTVHLYEL--PSF---MERGRIFSKHEVRVIEIGPDKLFFTGDG-------AGMLGVWKLLAK 392 (394)
Q Consensus 327 ~s~~g~~~l~sgs-~dg~I~iwd~--~~~---~~~~~~~~~~~v~~l~~sp~~~l~tgs~-------Dg~I~vWd~~~~ 392 (394)
++|+++ +|++++ .|+.|+||++ ... ..+..+.....|.+++|+|++++++.+. +..|.+|.+..+
T Consensus 315 ~~~~~~-~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 315 KSKNLP-FVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp ECSSSS-EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EeCCCC-EEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 789998 777777 8999999999 555 5555666567899999999775555433 556899987643
No 100
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=2.2e-27 Score=225.52 Aligned_cols=237 Identities=8% Similarity=-0.009 Sum_probs=179.1
Q ss_pred ccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCC
Q 016134 84 NLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG 163 (394)
Q Consensus 84 ~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~ 163 (394)
...|++++.|+++|+|++++.... .+...+. ......++...++.++ |+|++.+++.+ +++.|++|+|||+.++
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~v~-fSpDg~~la~a--s~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQ--LEFLTSV-DFDASTNADDYTKLVY-ISREGTVAAIA--SSKVPAIMRIIDPSDL 167 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTE--EEEEEEE-CSSCCCCTTCCEEEEE-ECTTSSCEEEE--ESCSSCEEEEEETTTT
T ss_pred ccEEEEecCCCcEEEEEecCCCce--EEEeeee-ceeecCCcccCEEEEE-EcCCCCEEEEE--ECCCCCEEEEeECCCC
Confidence 446788999999999998865421 0000000 0001223344678888 99999998743 3556779999999987
Q ss_pred ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEE
Q 016134 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLA 242 (394)
Q Consensus 164 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~ 242 (394)
+++.++. |...|.+|+|+|++++|++++.++. +|+..+++..... ....|...|.+++
T Consensus 168 -~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 168 -TEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARK-------------------TDFDKNWSLSKIN 226 (365)
T ss_dssp -EEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEE-------------------CCCCTTEEEEEEE
T ss_pred -cEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeee-------------------ecCCCCCCEEEEE
Confidence 6677765 7889999999999999999998877 5887777665321 1125677778888
Q ss_pred ec--CCeEEEEeCCC----eEEEEeCCCCce----eEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeE
Q 016134 243 VG--RSRLCSGSMDN----TIRVWELDTLEP----VMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 243 ~~--~~~l~sgs~Dg----~V~iwd~~~~~~----~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
|+ +.++++++.|+ .+++||+..... ...+.+|...|++++|+ +++||+|+.|++|+|||+++++.+..
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKI 306 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEE
Confidence 86 66788888887 688999876543 45677899999999998 88999999999999999999888877
Q ss_pred e-ecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 311 A-YTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 311 ~-~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
+ ..|...+.. ++|+|||+ +||+++.|++|+|||++..
T Consensus 307 ~~~gH~~~V~~----v~fSpdg~-~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 307 FKQAHSFAITE----VTISPDST-YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSSSSCEEE----EEECTTSC-EEEEEETTSEEEEEECCTT
T ss_pred ecCcccCCEEE----EEECCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 5 456544333 34699999 9999999999999999754
No 101
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=9.2e-28 Score=225.89 Aligned_cols=237 Identities=17% Similarity=0.241 Sum_probs=187.0
Q ss_pred CCCCccceeeecccccc----ccccCCCeecCCCCCeEEEEEcCCCceEEEEecc-----cCCCeEEEEecCC----CCE
Q 016134 122 ESGDKSTSKKTTLKNVC----CHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEG-----HEKAVSGIALPLR----SDK 188 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~----~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~-----h~~~V~~l~~s~~----~~~ 188 (394)
..||...|.+++ ++|. ...+++++.++ .|++||+.++ +.+..+.. |...|++++|+|+ +++
T Consensus 14 ~~~h~~~v~~i~-~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 14 KEDHNQPLFGVQ-FNWHSKEGDPLVFATVGSN----RVTLYECHSQ-GEIRLLQSYVDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp ECTTCSCEEEEE-ECTTCCTTSCEEEEEEETT----EEEEEEECGG-GCEEEEEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred ecCCCCceEEEE-EecccCCCCceEEEECCCC----EEEEEEcCCC-cEEEeeeeccccCCCCcEEEEEeccCCCCCCCE
Confidence 448888999999 9984 44455555555 8999999865 34444443 6688999999998 679
Q ss_pred EEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCC
Q 016134 189 LFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELD 263 (394)
Q Consensus 189 l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~ 263 (394)
|++++.|+. +||+++++.+.. ..+|...|.+++|+ +++|++++.|+.|++||++
T Consensus 88 l~~~~~dg~i~v~d~~~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQCIKH---------------------YVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp EEEEETTCEEEEECTTTCCEEEE---------------------EESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEecCCCEEEEEEchhceEeee---------------------ecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 999999998 699998876531 12577778888885 5789999999999999999
Q ss_pred CCceeEEE---cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeec-------------------------
Q 016134 264 TLEPVMTL---NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYT------------------------- 313 (394)
Q Consensus 264 ~~~~~~~~---~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~------------------------- 313 (394)
+++.+..+ ..|...|.+++|+ +++|++++.|+.|++||+++.+....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFST 226 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccc
Confidence 99999988 6899999999998 78999999999999999987654433322
Q ss_pred ---ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce--------------eEEEec-CCcEEEEEECCC--C
Q 016134 314 ---HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME--------------RGRIFS-KHEVRVIEIGPD--K 373 (394)
Q Consensus 314 ---~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~--------------~~~~~~-~~~v~~l~~sp~--~ 373 (394)
+......+. |+ ++ +|++++.|+.|++||+.+... +..+.. ...|++++|+|+ +
T Consensus 227 ~~~~~~~v~~~~----~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 227 RDIHRNYVDCVR----WL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp CSSCSSCCCEEE----EE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS
T ss_pred ccCCcceEEEEE----Ec--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC
Confidence 443333333 34 55 899999999999999987643 333333 567999999999 8
Q ss_pred -EEEEEeCCCeEEEEeCCCC
Q 016134 374 -LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 374 -~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|++++.||.|++||+.+.
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp SEEEEECTTSCEEEEECCSS
T ss_pred cEEEEEecCCcEEEEECCCC
Confidence 9999999999999999864
No 102
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.5e-27 Score=219.31 Aligned_cols=252 Identities=13% Similarity=0.144 Sum_probs=209.8
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.+|++ ++..+++++.|+.+++||++++.... ...+|...|.++. |+|++.++++++.+| .|
T Consensus 38 ~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~------------~~~~h~~~v~~~~-~~~~~~~l~s~~~dg----~i 98 (369)
T 3zwl_B 38 VKYNK--EGDLLFSCSKDSSASVWYSLNGERLG------------TLDGHTGTIWSID-VDCFTKYCVTGSADY----SI 98 (369)
T ss_dssp EEECT--TSCEEEEEESSSCEEEEETTTCCEEE------------EECCCSSCEEEEE-ECTTSSEEEEEETTT----EE
T ss_pred EEEcC--CCCEEEEEeCCCEEEEEeCCCchhhh------------hhhhcCCcEEEEE-EcCCCCEEEEEeCCC----eE
Confidence 34444 77789999999999999998876532 3567888999999 999999998776665 99
Q ss_pred EEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCC-----Cc--eeecCCCcE------------EEecCCCC--
Q 016134 156 HSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD-----GT--AWNIESSAE------------FSLDGPVG-- 214 (394)
Q Consensus 156 ~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-----g~--vWd~~~~~~------------~~~~~~~~-- 214 (394)
++||+.++ +.+..+. |...|.+++|+|++++|++++.+ +. +||+..... ..+..+..
T Consensus 99 ~iwd~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 99 KLWDVSNG-QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp EEEETTTC-CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred EEEECCCC-cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 99999887 6667776 89999999999999999999998 77 699876532 23344444
Q ss_pred cEEEEEEcCC--EEEEEecC-------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE
Q 016134 215 EVYSMVVANE--MLFAGAQD-------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL 271 (394)
Q Consensus 215 ~v~~l~~~~~--~l~~~~~~-------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 271 (394)
.+.+++|+++ .+++++.+ .|...|.+++|+ +.+|++++.|+.|++||+++++++..+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 8999999988 77777665 688999999997 678999999999999999999999888
Q ss_pred cCCCCCcEEEEEc--CCEEEEEeCCC--------------cEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEE
Q 016134 272 NDHTDAPMSLLCW--DQFLLSCSLDH--------------TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVL 335 (394)
Q Consensus 272 ~~h~~~v~~l~~~--~~~l~s~s~Dg--------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l 335 (394)
. +...+.++.|+ ++++++++.++ .+++||+.+.+.+..+..|...+..+ .|+|+++ +|
T Consensus 257 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~----~~s~~~~-~l 330 (369)
T 3zwl_B 257 E-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTV----AISPQGT-SY 330 (369)
T ss_dssp E-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEE----EECTTSS-EE
T ss_pred c-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEE----EECCCCC-EE
Confidence 7 77889999998 78999999888 89999999998888887776544333 3699998 99
Q ss_pred EEEeCCCeEEEEECCCCce
Q 016134 336 ICACNDNTVHLYELPSFME 354 (394)
Q Consensus 336 ~sgs~dg~I~iwd~~~~~~ 354 (394)
++++.|+.|+||+++.+..
T Consensus 331 ~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 331 ASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEETTSEEEEEEECHHHH
T ss_pred EEEcCCCeEEEEECccccc
Confidence 9999999999999987543
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1e-27 Score=248.79 Aligned_cols=243 Identities=14% Similarity=0.110 Sum_probs=192.9
Q ss_pred cCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC-CceEEEEecccCCCeEEEEecCC--CCEEEEEeCCCc
Q 016134 121 DESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE-GLTMLAKLEGHEKAVSGIALPLR--SDKLFSGSRDGT 197 (394)
Q Consensus 121 ~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~-~~~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~ 197 (394)
...||...|.++. |+|++.++++++.+| .|+|||+.+ ..+.+..+.+|.+.|++++|+|+ +++|++|+.||.
T Consensus 4 ~l~gH~~~V~~l~-~s~dg~~latg~~dg----~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 4 IANAHNELIHDAV-LDYYGKRLATCSSDK----TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ----CCCCEEEEC-CCSSSCCEEEEETTT----EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred ecccCcceeEEEE-ECCCCCeEEEEECCC----cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 4568889999999 999999999887766 999999963 24778899999999999999987 999999999999
Q ss_pred --eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCC--ceeE
Q 016134 198 --AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTL--EPVM 269 (394)
Q Consensus 198 --vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~--~~~~ 269 (394)
+||+.+++..... ...+|...|.+++|+ ++++++|+.|+.|++||++++ ....
T Consensus 79 I~vwd~~~~~~~~~~-------------------~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~ 139 (753)
T 3jro_A 79 VLIWKEENGRWSQIA-------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPI 139 (753)
T ss_dssp EEEEEEETTEEEEEE-------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCE
T ss_pred EEEEECCCCcccccc-------------------cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCccee
Confidence 6999887632110 222677888888886 568999999999999999876 3455
Q ss_pred EEcCCCCCcEEEEEcC---------------CEEEEEeCCCcEEEEEeCCCce----eeEeecccCCcceEEEEeeECCC
Q 016134 270 TLNDHTDAPMSLLCWD---------------QFLLSCSLDHTIKVWFATGRGN----LEAAYTHKEDNGVLALGGLNDPD 330 (394)
Q Consensus 270 ~~~~h~~~v~~l~~~~---------------~~l~s~s~Dg~i~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~ 330 (394)
.+..|...|.++.|+. .+|++++.|+.|++||++.+.. ...+..|... +. ++.|+|+
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~--V~--~l~~sp~ 215 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW--VR--DVAWSPT 215 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC--EE--EEEECCC
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc--EE--EEEeccC
Confidence 6778999999999973 6899999999999999987643 3334444433 33 3346999
Q ss_pred ---CCcEEEEEeCCCeEEEEECCCCceeE------EEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 331 ---GKPVLICACNDNTVHLYELPSFMERG------RIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 331 ---g~~~l~sgs~dg~I~iwd~~~~~~~~------~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+. +|++++.|+.|++||+.++.... ...+...|++++|+|++ +|++++.||.|++|++...
T Consensus 216 ~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 216 VLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 66 99999999999999999864211 11135679999999999 9999999999999999853
No 104
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=1.2e-26 Score=214.34 Aligned_cols=252 Identities=17% Similarity=0.201 Sum_probs=201.0
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCC
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECR 153 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~ 153 (394)
+.++|++ ++ .|+. +.|++|+|||++++.....- ...+|...|.+++ ++|++.++++++.+|
T Consensus 29 ~~l~WS~--~~-~lAv-g~D~tV~iWd~~tg~~~~~~----------~~~~~~~~V~~v~-~~~~~~~l~sgs~Dg---- 89 (318)
T 4ggc_A 29 NLVDWSS--GN-VLAV-ALDNSVYLWSASSGDILQLL----------QMEQPGEYISSVA-WIKEGNYLAVGTSSA---- 89 (318)
T ss_dssp BCEEECT--TS-EEEE-EETTEEEEEETTTCCEEEEE----------ECCSTTCCEEEEE-ECTTSSEEEEEETTS----
T ss_pred eEEEECC--CC-EEEE-EeCCEEEEEECCCCCEEEEE----------EecCCCCeEEEEE-ECCCCCEEEEEECCC----
Confidence 5678886 54 4454 56999999999998754311 2456778899999 999999998877666
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE--EecCCCCcEEEEEEcCC--EEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF--SLDGPVGEVYSMVVANE--MLF 227 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~--~~~~~~~~v~~l~~~~~--~l~ 227 (394)
+|++||+.++ +++..+.+|...+.++.+ ++..|++++.++. +|+....... .+.+|...+..+.+.++ .++
T Consensus 90 ~v~iw~~~~~-~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 90 EVQLWDVQQQ-KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp EEEEEETTTT-EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred cEEEeecCCc-eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 9999999988 889999999999987765 5679999999998 4777665433 67789999999999887 788
Q ss_pred EEecC----------------------CCCCCEEEEEec---CCe--EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEE
Q 016134 228 AGAQD----------------------GHTRPVTCLAVG---RSR--LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMS 280 (394)
Q Consensus 228 ~~~~~----------------------~h~~~V~~l~~~---~~~--l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~ 280 (394)
+++.| .|...|.++.+. ... +++++.+++|++||.+......... +...+..
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~ 245 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCS 245 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred EEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeee
Confidence 87766 466788888886 333 4567789999999999888776654 6677888
Q ss_pred EEEc--CCEEEEEe--CCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc
Q 016134 281 LLCW--DQFLLSCS--LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM 353 (394)
Q Consensus 281 l~~~--~~~l~s~s--~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~ 353 (394)
+.+. +..+++++ .|+.|++||+++++.+..+..|...+..+ .|+|+++ +|++++.|++|+|||+.+..
T Consensus 246 ~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l----~~spdg~-~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 246 ILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSL----TMSPDGA-TVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEE----EECTTSS-CEEEEETTTEEEEECCSCCC
T ss_pred eeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEE----EEcCCCC-EEEEEecCCeEEEEECCCCC
Confidence 8888 66666554 79999999999999999988877554333 4699999 89999999999999997653
No 105
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=5.8e-28 Score=226.69 Aligned_cols=252 Identities=16% Similarity=0.263 Sum_probs=192.0
Q ss_pred ccc-ccccCCC---CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccc---ccccCCCeecCCCCCeE
Q 016134 83 NNL-WVSSGSE---DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVC---CHWLLGNCVRGDECRFL 155 (394)
Q Consensus 83 ~~~-~~~s~s~---d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~~~~~~~~g~~~~~i 155 (394)
++. .+++|+. |+++++||++++.... ....+|...|.++. |+|+ +.++++++.+| .|
T Consensus 29 ~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-----------~~~~~~~~~v~~~~-~~~~~~~~~~l~~~~~dg----~i 92 (357)
T 3i2n_A 29 CSAKFVTMGNFARGTGVIQLYEIQHGDLKL-----------LREIEKAKPIKCGT-FGATSLQQRYLATGDFGG----NL 92 (357)
T ss_dssp TSSEEEEEEC--CCCEEEEEEEECSSSEEE-----------EEEEEESSCEEEEE-CTTCCTTTCCEEEEETTS----CE
T ss_pred CCceEEEecCccCCCcEEEEEeCCCCcccc-----------eeeecccCcEEEEE-EcCCCCCCceEEEecCCC----eE
Confidence 454 3456665 9999999999876432 12336777899999 9998 68888777666 99
Q ss_pred EEEEcCCCceEEEEecccCCCeEEEE------ecCCCCEEEEEeCCCc--eeecCCCc-E-EEecCCCC----cEEEEE-
Q 016134 156 HSWFCGEGLTMLAKLEGHEKAVSGIA------LPLRSDKLFSGSRDGT--AWNIESSA-E-FSLDGPVG----EVYSMV- 220 (394)
Q Consensus 156 ~iWd~~~~~~~~~~l~~h~~~V~~l~------~s~~~~~l~sgs~Dg~--vWd~~~~~-~-~~~~~~~~----~v~~l~- 220 (394)
++||+.++..++..+.+|...|.+++ |+|++++|++++.|+. +||+++++ . ..+..+.+ .+.++.
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEE
Confidence 99999887548889999999999995 5789999999999999 69999876 2 24444333 788888
Q ss_pred ---EcCC--EEEEEecC-----------------CCCCCEEEEEec-----CCeEEEEeCCCeEEEEeCCCCceeEEEc-
Q 016134 221 ---VANE--MLFAGAQD-----------------GHTRPVTCLAVG-----RSRLCSGSMDNTIRVWELDTLEPVMTLN- 272 (394)
Q Consensus 221 ---~~~~--~l~~~~~~-----------------~h~~~V~~l~~~-----~~~l~sgs~Dg~V~iwd~~~~~~~~~~~- 272 (394)
|+++ .+++++.+ .|...|.+++|+ +++|++++.|+.|++||+++++++..+.
T Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 252 (357)
T 3i2n_A 173 GNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFAS 252 (357)
T ss_dssp ECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEE
T ss_pred EeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceee
Confidence 4555 77777765 578899999996 4789999999999999998876554444
Q ss_pred ----CCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCc-------------------eeeEeecccCCcceEEEEee
Q 016134 273 ----DHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRG-------------------NLEAAYTHKEDNGVLALGGL 326 (394)
Q Consensus 273 ----~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~-------------------~~~~~~~~~~~~~~~~~~~~ 326 (394)
+|...|+++.|+ +. +|++++.|+.|++||++... .+..+..|... +. .+.
T Consensus 253 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--v~--~~~ 328 (357)
T 3i2n_A 253 VSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQP--IS--SLD 328 (357)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSC--EE--EEE
T ss_pred eccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCC--ee--EEE
Confidence 899999999998 44 89999999999999998643 23334444333 33 334
Q ss_pred ECCCCCcEEEEEeCCCeEEEEECCCCce
Q 016134 327 NDPDGKPVLICACNDNTVHLYELPSFME 354 (394)
Q Consensus 327 ~s~~g~~~l~sgs~dg~I~iwd~~~~~~ 354 (394)
|+|+++.++++++.|+.|+|||+.+.+.
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 7999994444899999999999987654
No 106
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-27 Score=231.75 Aligned_cols=259 Identities=10% Similarity=0.045 Sum_probs=192.5
Q ss_pred cccCCCCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeec
Q 016134 69 KLAKKSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVR 148 (394)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~ 148 (394)
+...-..++|++ |+..++|+|.|++|+ |...+. ...||...|..++ |+|++
T Consensus 14 ~~~~v~sv~~Sp--DG~~iASas~D~TV~--d~~~~~---------------~l~gh~~~v~~V~-FsPdg--------- 64 (588)
T 2j04_A 14 FEDWKNNLTWAR--DGTLYLTTFPDISIG--QPKYAK---------------DINCNSKNLFHVK-EFPLE--------- 64 (588)
T ss_dssp CSSSSCCEEECT--TSCEEEECSSSEEEE--EECCCS---------------CCSSBGGGTEEEE-EECCC---------
T ss_pred hhccEEEEEECC--CCCEEEEEcCCceee--cccccc---------------eecCCCccEEEEE-ECCCC---------
Confidence 334667888999 999999999999999 543332 2358999999999 99977
Q ss_pred CCCCCeEEEEEcCCCceEEEEec-ccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCE
Q 016134 149 GDECRFLHSWFCGEGLTMLAKLE-GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 149 g~~~~~i~iWd~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
.++.+.+|+.+.. ..+. .|...|.+++|+|+|++||+++.||. |||.+. .+....+...
T Consensus 65 --~~~~~~~~~~~~~----~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~---------- 126 (588)
T 2j04_A 65 --FENKLDFELAQQN----GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGN---------- 126 (588)
T ss_dssp --CCCTTTTSCCCSS----CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSC----------
T ss_pred --CcceEEEEeCCCc----eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCc----------
Confidence 2334444543221 2222 56899999999999999999999999 699544 3221112110
Q ss_pred EEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCc-------eeEEE----cCCCCCcEEEEEcCCEEEEEe
Q 016134 226 LFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLE-------PVMTL----NDHTDAPMSLLCWDQFLLSCS 292 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~-------~~~~~----~~h~~~v~~l~~~~~~l~s~s 292 (394)
--...|.+++|+ +++|++|+.||+|+|||+++++ .+.++ .+|...|.+++|+.+-+++++
T Consensus 127 -------~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass 199 (588)
T 2j04_A 127 -------LSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAAL 199 (588)
T ss_dssp -------STTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEE
T ss_pred -------cccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEe
Confidence 002257788887 7899999999999999999875 36776 668889999999933399999
Q ss_pred CCCcEEEEEeCCCcee---eEee-cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEE-ecCCcEEEE
Q 016134 293 LDHTIKVWFATGRGNL---EAAY-THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRI-FSKHEVRVI 367 (394)
Q Consensus 293 ~Dg~i~vwd~~~~~~~---~~~~-~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~-~~~~~v~~l 367 (394)
.|++|++||+...+.. ..+. .|...+..++ |+ ++ .||+++ +++|++||+.+++..... .+...|..+
T Consensus 200 ~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva----Fs--g~-~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v 271 (588)
T 2j04_A 200 SNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK----IV--DY-KVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII 271 (588)
T ss_dssp TTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE----EE--TT-EEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE
T ss_pred CCCeEEEEECCCCccccceeeecccccCcEEEEE----EE--CC-EEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE
Confidence 9999999999876632 3342 3443344444 35 45 788887 699999999988774333 557789999
Q ss_pred EE--CCCC-EEEEEeCCCeEEEEeCC
Q 016134 368 EI--GPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 368 ~~--sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
+| +|++ .|+++++||+ ++|.++
T Consensus 272 a~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 272 PLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99 9999 9999999999 999874
No 107
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5.8e-28 Score=231.76 Aligned_cols=228 Identities=11% Similarity=0.067 Sum_probs=159.4
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCce----EEEEecccCCCeEEEEecC--------CCCEEEEEeCCCc--eee
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLT----MLAKLEGHEKAVSGIALPL--------RSDKLFSGSRDGT--AWN 200 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~----~~~~l~~h~~~V~~l~~s~--------~~~~l~sgs~Dg~--vWd 200 (394)
+.+...++++++.++ +|+|||..++.. ++..+.+|++.|++|+|+| |+++|+|++.|++ |||
T Consensus 97 ~~~~~~~las~~~d~----~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 97 SPVYSLFLACVCQDN----TVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp CCEEEEEEEEEETTS----CEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred cCCCCCEEEEEeCCC----cEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 566677777666665 999999977632 3445789999999999987 7899999999999 699
Q ss_pred cCCCcEE-EecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecC---CeEEEEeCCCeEEEEeCCCCceeEEE-----
Q 016134 201 IESSAEF-SLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGR---SRLCSGSMDNTIRVWELDTLEPVMTL----- 271 (394)
Q Consensus 201 ~~~~~~~-~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~---~~l~sgs~Dg~V~iwd~~~~~~~~~~----- 271 (394)
+.++... .+. .|...|.+++|++ .+|++++.|++|++||+++++....+
T Consensus 173 ~~~~~~~~~~~----------------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 173 LTDEGPILAGY----------------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp EETTEEEEEEE----------------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------
T ss_pred CCCCceeeeec----------------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC
Confidence 9877654 322 4566777777762 47999999999999999887643322
Q ss_pred --------------------cCCCCCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEE------
Q 016134 272 --------------------NDHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLA------ 322 (394)
Q Consensus 272 --------------------~~h~~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~------ 322 (394)
.+|...+.++.|+ +..|++++.|+++++||+........+..+........
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 3567788888886 78999999999999999987655444433221111000
Q ss_pred --------EEeeEC-CCCCcEEEEEeCCCeEEEEECCCCceeEEEe-cCCcEEEEEECCCC-EEEEEeCCCeEEEEeC
Q 016134 323 --------LGGLND-PDGKPVLICACNDNTVHLYELPSFMERGRIF-SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 323 --------~~~~~s-~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
....++ +.+..++++|+.|++|+|||+.+++...... +...|++++|+||| +||+++.|| +.+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred cccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 011123 3344477888999999999999987766544 46789999999999 999998776 556654
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.1e-26 Score=221.77 Aligned_cols=295 Identities=13% Similarity=0.126 Sum_probs=196.7
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCC-ccccccCCCCccceeeeccccc-cccccCCCeecCCCCCeEEEEEc
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSA-SSTVSDESGDKSTSKKTTLKNV-CCHWLLGNCVRGDECRFLHSWFC 160 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~-~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~~~~~g~~~~~i~iWd~ 160 (394)
++..+++++.|+++++||++++........... ........+|...|.++. |+| .+.++++++.+| .|++||+
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~l~s~~~d~----~i~iwd~ 129 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQ-WYPHDTGMFTSSSFDK----TLKVWDT 129 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEE-ECTTCTTCEEEEETTS----EEEEEET
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEE-EccCCCcEEEEEeCCC----eEEEeeC
Confidence 456789999999999999998775432110000 000112246888999999 998 777887766665 9999999
Q ss_pred CCCceEEEEecccCCCeEEEEecCC---CCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC---EEEEEec
Q 016134 161 GEGLTMLAKLEGHEKAVSGIALPLR---SDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE---MLFAGAQ 231 (394)
Q Consensus 161 ~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~---~l~~~~~ 231 (394)
.++ +.+..+. +...+.+++|++. +.+|++++.|+. +||+++++.+ .+..|...|.+++|+|+ .+++++.
T Consensus 130 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 130 NTL-QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTT-EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCC-ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 887 6666665 7889999999884 459999999999 6999988765 66779999999999988 4777776
Q ss_pred C----------------------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC
Q 016134 232 D----------------------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT 275 (394)
Q Consensus 232 ~----------------------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~ 275 (394)
+ .|...|.+++|+ +++|++++.|+.|++||+++++....+..+.
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 287 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKV 287 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCC
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccc
Confidence 5 377889999997 6789999999999999999887655443321
Q ss_pred ------CCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEE
Q 016134 276 ------DAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYE 348 (394)
Q Consensus 276 ------~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd 348 (394)
.....+... ...+++++.|+.|++||+.+++.+..+..|...+..+ .|+|++. +|++++.||.|++||
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~----~~s~~~~-~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 288 CNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCC----VFQSNFQ-ELYSGSRDCNILAWV 362 (408)
T ss_dssp CCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEE----EEETTTT-EEEEEETTSCEEEEE
T ss_pred cccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEE----EEcCCCC-EEEEECCCCeEEEEe
Confidence 111222222 5667777889999999999999888887776544333 4689998 999999999999999
Q ss_pred CCCCceeEEEecCCcEEEEEECCCC--EEEEEeCCCeEEEEeCCC
Q 016134 349 LPSFMERGRIFSKHEVRVIEIGPDK--LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tgs~Dg~I~vWd~~~ 391 (394)
+.+.+.+......... ..+.+.. .+.+.+.|+.+++|+...
T Consensus 363 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 363 PSLYEPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp ECC------------------------------------------
T ss_pred CCCCCccCCCCceEec--cccccccceeecccCccCceeecCCcc
Confidence 9998776655432222 2334433 667788899999998653
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=1.9e-27 Score=221.30 Aligned_cols=255 Identities=14% Similarity=0.103 Sum_probs=192.5
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc--cccccCCCeecCCCCC
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV--CCHWLLGNCVRGDECR 153 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~--~~~~~~~~~~~g~~~~ 153 (394)
.+|++ ++..+++++.|+++++||++++.... .......+|...|.++. |+| ++.++++++.+|
T Consensus 17 ~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~--------~~~~~~~~~~~~v~~~~-~~~~~d~~~l~s~~~dg---- 81 (351)
T 3f3f_A 17 VVYDF--YGRHVATCSSDQHIKVFKLDKDTSNW--------ELSDSWRAHDSSIVAID-WASPEYGRIIASASYDK---- 81 (351)
T ss_dssp EEECS--SSSEEEEEETTSEEEEEEECSSSCCE--------EEEEEEECCSSCEEEEE-ECCGGGCSEEEEEETTS----
T ss_pred EEEcC--CCCEEEEeeCCCeEEEEECCCCCCcc--------eecceeccCCCcEEEEE-EcCCCCCCEEEEEcCCC----
Confidence 44555 77789999999999999998764210 00113457888999999 888 588888777766
Q ss_pred eEEEEEcCCCc--------eEEEEecccCCCeEEEEecCC--CCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEE
Q 016134 154 FLHSWFCGEGL--------TMLAKLEGHEKAVSGIALPLR--SDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVV 221 (394)
Q Consensus 154 ~i~iWd~~~~~--------~~~~~l~~h~~~V~~l~~s~~--~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~ 221 (394)
.|++||+.++. +++..+.+|...|.+++|+|+ +++|++++.|+. +||+.+++.+........+..+.+
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 161 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI 161 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc
Confidence 99999997653 668889999999999999999 999999999998 699988765321111111111111
Q ss_pred cCCEEEEEecCCCCCCEEEEEec-----CCeEEEEeCCCeEEEEeCCCCce--eEEEcCCCCCcEEEEEc--C----CEE
Q 016134 222 ANEMLFAGAQDGHTRPVTCLAVG-----RSRLCSGSMDNTIRVWELDTLEP--VMTLNDHTDAPMSLLCW--D----QFL 288 (394)
Q Consensus 222 ~~~~l~~~~~~~h~~~V~~l~~~-----~~~l~sgs~Dg~V~iwd~~~~~~--~~~~~~h~~~v~~l~~~--~----~~l 288 (394)
....|...+.+++|+ +.+|++++.|+.+.+|+...++. +..+.+|...|.+++|+ + ++|
T Consensus 162 --------~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 162 --------PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp --------CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred --------ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEE
Confidence 112677888888885 57899999999998888887765 77788999999999999 3 589
Q ss_pred EEEeCCCcEEEEEeCCC----------------------------------------------ceeeEeecccCCcceEE
Q 016134 289 LSCSLDHTIKVWFATGR----------------------------------------------GNLEAAYTHKEDNGVLA 322 (394)
Q Consensus 289 ~s~s~Dg~i~vwd~~~~----------------------------------------------~~~~~~~~~~~~~~~~~ 322 (394)
++++.|+.|++||++.. +.+..+..|... +.
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--v~- 310 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE--VW- 310 (351)
T ss_dssp EEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC--EE-
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc--EE-
Confidence 99999999999999864 233333334333 33
Q ss_pred EEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEE
Q 016134 323 LGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRI 358 (394)
Q Consensus 323 ~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~ 358 (394)
.+.|+|+++ +|++++.|+.|+|||+.+++....+
T Consensus 311 -~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 311 -SVSWNLTGT-ILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp -EEEECSSSC-CEEEEETTSCEEEEEECTTSCEEEE
T ss_pred -EEEEcCCCC-EEEEecCCCcEEEEecCcCcchhhe
Confidence 334799998 8999999999999999987655544
No 110
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=5.5e-26 Score=214.56 Aligned_cols=216 Identities=13% Similarity=0.092 Sum_probs=181.3
Q ss_pred ecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCc--E-EEecCCCCcEEEEEEcCC--EEEEEecC----------
Q 016134 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSA--E-FSLDGPVGEVYSMVVANE--MLFAGAQD---------- 232 (394)
Q Consensus 170 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~--~-~~~~~~~~~v~~l~~~~~--~l~~~~~~---------- 232 (394)
+..|..+|++++|+|++++|++++.|+. +||+++++ . ..+..|...|.+++|+++ .+++++.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 4569999999999999999999999998 69999985 3 367789999999999987 78888766
Q ss_pred ----------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCce---eEEE-cCCCCCcEEEEEc--CCEEEEEeCC
Q 016134 233 ----------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEP---VMTL-NDHTDAPMSLLCW--DQFLLSCSLD 294 (394)
Q Consensus 233 ----------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~---~~~~-~~h~~~v~~l~~~--~~~l~s~s~D 294 (394)
.|...|.+++|+ +++|++++.|+.|++||++..+. ...+ ..|...|.+++|+ +++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 588899999997 67999999999999999988762 3333 6789999999998 7899999999
Q ss_pred CcEEEEEeC------------------CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeE
Q 016134 295 HTIKVWFAT------------------GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERG 356 (394)
Q Consensus 295 g~i~vwd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~ 356 (394)
+.|++||++ .++.+..+..+.... . .+.|+|++. +|++++.|+.|++||+++++.+.
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~--~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV--H--GVCFSANGS-RVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE--E--EEEECSSSS-EEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeE--E--EEEECCCCC-EEEEEeCCCEEEEEECCCCceeE
Confidence 999999964 445555555444333 3 334689998 89999999999999999998888
Q ss_pred EEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 357 RIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 357 ~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
.+.. ...|.+++|+|++ +|+++ .|+.|++|++..
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 8765 5689999999999 66666 999999999876
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=9.3e-26 Score=213.43 Aligned_cols=257 Identities=13% Similarity=0.089 Sum_probs=190.2
Q ss_pred CCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEE-EEeCCCc--e
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLF-SGSRDGT--A 198 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~-sgs~Dg~--v 198 (394)
..+|...|.+++ |+|++.+++++..+ .++||+..+. +.+.... ...+..+++.++++.++ +++.|++ |
T Consensus 15 ~~~h~~~V~~v~-fs~dg~~la~g~~~-----~~~iw~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~i 85 (355)
T 3vu4_A 15 ENHVSNPVTDYE-FNQDQSCLILSTLK-----SFEIYNVHPV-AHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHI 85 (355)
T ss_dssp ----CCCCCEEE-ECTTSSEEEEECSS-----EEEEEEETTE-EEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEE
T ss_pred cccCCCceEEEE-ECCCCCEEEEEcCC-----EEEEEecCCc-ceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEE
Confidence 356778999999 99999999876544 3789998765 4443332 23588889999888874 5667777 6
Q ss_pred eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecC------CCCC---------CEEEEEecCCeEEE--EeCCCeEEEEe
Q 016134 199 WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQD------GHTR---------PVTCLAVGRSRLCS--GSMDNTIRVWE 261 (394)
Q Consensus 199 Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~------~h~~---------~V~~l~~~~~~l~s--gs~Dg~V~iwd 261 (394)
||+.+++.+....+...|.++.++++.++++..+ -... ....++++..+++. |+.||.|++||
T Consensus 86 Wd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd 165 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITK 165 (355)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEE
T ss_pred EECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEE
Confidence 9999999886556778999999999966665433 0000 11222333456666 68999999999
Q ss_pred CCCCc----------------eeEEEcCCCCCcEEEEEc--CCEEEEEeCCCc-EEEEEeCCCceeeEee-c-ccCCcce
Q 016134 262 LDTLE----------------PVMTLNDHTDAPMSLLCW--DQFLLSCSLDHT-IKVWFATGRGNLEAAY-T-HKEDNGV 320 (394)
Q Consensus 262 ~~~~~----------------~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~-i~vwd~~~~~~~~~~~-~-~~~~~~~ 320 (394)
+++++ ++..+.+|...|.+++|+ +.+|++++.|++ |++||+++++.+..+. . |... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~--v 243 (355)
T 3vu4_A 166 LQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRAD--V 243 (355)
T ss_dssp CCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSC--E
T ss_pred CCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCc--E
Confidence 99765 278899999999999998 789999999998 9999999998888877 3 4433 3
Q ss_pred EEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeE--E--------------------Eec--CCcEEEEEECCCC-EE
Q 016134 321 LALGGLNDPDGKPVLICACNDNTVHLYELPSFMERG--R--------------------IFS--KHEVRVIEIGPDK-LF 375 (394)
Q Consensus 321 ~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~--~--------------------~~~--~~~v~~l~~sp~~-~l 375 (394)
.+ +.|+|+++ +|++++.|++|+|||++...... . +.. ......++|++++ +|
T Consensus 244 ~~--~~~s~~~~-~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l 320 (355)
T 3vu4_A 244 VD--MKWSTDGS-KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLV 320 (355)
T ss_dssp EE--EEECTTSC-EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEE
T ss_pred EE--EEECCCCC-EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEE
Confidence 33 34799999 99999999999999997653111 0 000 1224678999999 99
Q ss_pred EEEeCCCeEEEEeCCCC
Q 016134 376 FTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 376 ~tgs~Dg~I~vWd~~~~ 392 (394)
++++.||.+++|++...
T Consensus 321 ~~~~~dg~~~~~~~~~~ 337 (355)
T 3vu4_A 321 VVWPHTRMIETFKVVFD 337 (355)
T ss_dssp EEETTTTEEEEEEEEEE
T ss_pred EEEeCCCeEEEEEEEcC
Confidence 99999999999998654
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.9e-26 Score=212.99 Aligned_cols=206 Identities=17% Similarity=0.225 Sum_probs=163.0
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEE
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLA 242 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~ 242 (394)
+++..+.+|.+.|++++|+|++++|++++.|+. |||++....... ....+|...|.+++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------------~~~~~h~~~v~~~~ 62 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-------------------DTLTGHEGPVWRVD 62 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE-------------------EEECCCSSCEEEEE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceee-------------------eEecCCCCcEEEEE
Confidence 456788999999999999999999999999998 699974432211 12237888888998
Q ss_pred ec----CCeEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCcEEEEEc----CCEEEEEeCCCcEEEEEeCCCceeeEee
Q 016134 243 VG----RSRLCSGSMDNTIRVWELDTLE--PVMTLNDHTDAPMSLLCW----DQFLLSCSLDHTIKVWFATGRGNLEAAY 312 (394)
Q Consensus 243 ~~----~~~l~sgs~Dg~V~iwd~~~~~--~~~~~~~h~~~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~~~~~~~~~ 312 (394)
|+ +++|++++.|+.|++||+++++ .+..+..|...|.+++|+ +.+|++++.|+.|++||++.........
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 142 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII 142 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE
Confidence 86 6899999999999999999887 778888899999999998 5699999999999999998874433322
Q ss_pred cccCCcceEEEEeeECC-------------CCCcEEEEEeCCCeEEEEECCCCcee----EEEe-cCCcEEEEEECCC--
Q 016134 313 THKEDNGVLALGGLNDP-------------DGKPVLICACNDNTVHLYELPSFMER----GRIF-SKHEVRVIEIGPD-- 372 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~-------------~g~~~l~sgs~dg~I~iwd~~~~~~~----~~~~-~~~~v~~l~~sp~-- 372 (394)
.......+.++ .|+| ++. +|++++.|+.|++||+++.... ..+. +...|.+++|+|+
T Consensus 143 ~~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 143 IDAHAIGVNSA--SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp EECCTTCEEEE--EECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred ecCCCCceEEE--EEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 22222333333 4678 577 8999999999999999876533 2333 3667999999999
Q ss_pred -C-EEEEEeCCCeEEEEeCCCC
Q 016134 373 -K-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 373 -~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ +|++++.||.|++||+...
T Consensus 220 ~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 220 LRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp SSEEEEEEETTSCEEEEEESST
T ss_pred CCCeEEEEeCCCEEEEEeCCCC
Confidence 8 9999999999999998864
No 113
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.7e-25 Score=208.01 Aligned_cols=228 Identities=14% Similarity=0.211 Sum_probs=183.8
Q ss_pred ceEEEEecccCCCeEEEEecCC---CCEEEEEeCCCc--eeecCC-CcEE--EecCCCCcEEEEEEcCC--EEEEEecC-
Q 016134 164 LTMLAKLEGHEKAVSGIALPLR---SDKLFSGSRDGT--AWNIES-SAEF--SLDGPVGEVYSMVVANE--MLFAGAQD- 232 (394)
Q Consensus 164 ~~~~~~l~~h~~~V~~l~~s~~---~~~l~sgs~Dg~--vWd~~~-~~~~--~~~~~~~~v~~l~~~~~--~l~~~~~~- 232 (394)
.+.+..+.+|.+.|++++|+|+ +++|++++.|+. |||+++ +..+ .+..|...|.+++|+++ .+++++.+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 4778899999999999999999 699999999998 699997 5543 56789999999999988 78888877
Q ss_pred ----------------CCCCCEEEEEe--c--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEe
Q 016134 233 ----------------GHTRPVTCLAV--G--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS 292 (394)
Q Consensus 233 ----------------~h~~~V~~l~~--~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s 292 (394)
.|...|.+++| + +.+|++++.|+.|++||+++++++..+..+ ..+.++.+....+++++
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEETTEEEEEE
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecCCeeEEEe
Confidence 68899999999 5 567999999999999999999999988866 47788888888999999
Q ss_pred CCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCC-cEEEEEeCCCeEEEEECCCC---ceeEEEecCC------
Q 016134 293 LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGK-PVLICACNDNTVHLYELPSF---MERGRIFSKH------ 362 (394)
Q Consensus 293 ~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~~l~sgs~dg~I~iwd~~~~---~~~~~~~~~~------ 362 (394)
.++.+++||++...................+.....+... ..+++++.|+.|++||++.. .....+....
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 9999999999876554444433333334444433333322 14899999999999999987 3444444322
Q ss_pred -------cEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 363 -------EVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 363 -------~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.|++++|+|++ +|++++.||.|++||+.+.
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred cccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 69999999999 9999999999999999864
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=7.2e-25 Score=208.95 Aligned_cols=258 Identities=13% Similarity=0.053 Sum_probs=197.0
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccccccc-CCCeecCCCCCeEEEEEcCCCc
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWL-LGNCVRGDECRFLHSWFCGEGL 164 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~-~~~~~~g~~~~~i~iWd~~~~~ 164 (394)
.+++++.|++|++||++++.... ...++. .+.+++ ++|++.++ +++..+ +.|++||+.++
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~------------~~~~~~-~~~~~~-~s~dg~~l~~~~~~d----~~i~v~d~~~~- 64 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTA------------TIPVGS-NPMGAV-ISPDGTKVYVANAHS----NDVSIIDTATN- 64 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEE------------EEECSS-SEEEEE-ECTTSSEEEEEEGGG----TEEEEEETTTT-
T ss_pred EEEEcCCCCEEEEEECCCCeEEE------------EeecCC-CcceEE-ECCCCCEEEEECCCC----CeEEEEECCCC-
Confidence 35788999999999999876532 112232 467888 99999876 433344 49999999887
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEe-CCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEE
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCL 241 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l 241 (394)
+.+..+..|. .|.+++|+|++++|+.++ .|+. +||+.+++.+.... +...+.++
T Consensus 65 ~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~----------------------~~~~~~~~ 121 (391)
T 1l0q_A 65 NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK----------------------TGKSPLGL 121 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----------------------CSSSEEEE
T ss_pred eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe----------------------CCCCcceE
Confidence 7777777665 999999999999886554 5577 69999887764322 22356677
Q ss_pred Eec--CCeE-EEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEE-EEEeCCCcEEEEEeCCCceeeEeeccc
Q 016134 242 AVG--RSRL-CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFL-LSCSLDHTIKVWFATGRGNLEAAYTHK 315 (394)
Q Consensus 242 ~~~--~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~Dg~i~vwd~~~~~~~~~~~~~~ 315 (394)
+|+ ++.| ++++.|+.|++||+++++.+..+..+ ..+.++.|+ +++| ++++.|+.|++||+++++....+...
T Consensus 122 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~- 199 (391)
T 1l0q_A 122 ALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE- 199 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC-
Confidence 776 4555 78888999999999999998888765 456889998 5666 67778999999999988766555432
Q ss_pred CCcceEEEEeeECCCCCcEEEEEe---CCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EE-EEEeCCCeEEEEeCC
Q 016134 316 EDNGVLALGGLNDPDGKPVLICAC---NDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LF-FTGDGAGMLGVWKLL 390 (394)
Q Consensus 316 ~~~~~~~~~~~~s~~g~~~l~sgs---~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l-~tgs~Dg~I~vWd~~ 390 (394)
.... .+.|+|+++ +|++++ .++.|++||+.+++.+..+.....+.+++|+|++ +| ++++.|+.|++||+.
T Consensus 200 --~~~~--~~~~~~~g~-~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 200 --AAPS--GIAVNPEGT-KAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp --SEEE--EEEECTTSS-EEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred --CCcc--ceEECCCCC-EEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 1222 345799999 566565 6899999999999888888777779999999999 55 677899999999987
Q ss_pred CC
Q 016134 391 AK 392 (394)
Q Consensus 391 ~~ 392 (394)
+.
T Consensus 275 ~~ 276 (391)
T 1l0q_A 275 TN 276 (391)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=6.4e-25 Score=212.18 Aligned_cols=273 Identities=10% Similarity=0.033 Sum_probs=207.2
Q ss_pred CCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCe
Q 016134 75 PPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRF 154 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 154 (394)
..+|++ ++..+++++.|+++++||++++...... ......+|...+..+. +++++.+++++..++ .
T Consensus 127 ~~~~s~--~~~~~~~~~~~~~i~~~d~~~g~~~~~~-------~~~~~~~~~~~v~~~~-~~~~~~~~~s~~~d~----~ 192 (433)
T 3bws_A 127 SVRFID--NTRLAIPLLEDEGMDVLDINSGQTVRLS-------PPEKYKKKLGFVETIS-IPEHNELWVSQMQAN----A 192 (433)
T ss_dssp CCEESS--SSEEEEEBTTSSSEEEEETTTCCEEEEC-------CCHHHHTTCCEEEEEE-EGGGTEEEEEEGGGT----E
T ss_pred EEEEeC--CCeEEEEeCCCCeEEEEECCCCeEeeec-------CcccccccCCceeEEE-EcCCCEEEEEECCCC----E
Confidence 455555 6667778888999999999987753211 0012346777889998 899998888776555 9
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEE-EeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFS-GSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s-gs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
|++||+.++ +.+..+..|...+.+++|+|++++|++ ++.|+. +||+++++.........
T Consensus 193 v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~----------------- 254 (433)
T 3bws_A 193 VHVFDLKTL-AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG----------------- 254 (433)
T ss_dssp EEEEETTTC-CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-----------------
T ss_pred EEEEECCCc-eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-----------------
Confidence 999999877 777888899999999999999998854 447887 69999887764433222
Q ss_pred CCCCCCEEEEEec--CCeEEEEe--------CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEE
Q 016134 232 DGHTRPVTCLAVG--RSRLCSGS--------MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIK 298 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~~~l~sgs--------~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~ 298 (394)
.+.+++|+ +++|++++ .|+.|++||+++++.+..+. |...+.+++|+ ++ ++++++.|+.|+
T Consensus 255 -----~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~ 328 (433)
T 3bws_A 255 -----LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIE 328 (433)
T ss_dssp -----EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEE
T ss_pred -----CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEE
Confidence 35555664 45666666 58999999999988777663 55688899998 54 556678999999
Q ss_pred EEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC---------------CCeEEEEECCCCceeEEEecCCc
Q 016134 299 VWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN---------------DNTVHLYELPSFMERGRIFSKHE 363 (394)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~---------------dg~I~iwd~~~~~~~~~~~~~~~ 363 (394)
+||+.+++.+..+. +.. ... .+.|+|+++ +|++++. ||.|++||+.+++.+..+.....
T Consensus 329 v~d~~~~~~~~~~~-~~~--~~~--~~~~s~dg~-~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~ 402 (433)
T 3bws_A 329 VYDLKEKKVQKSIP-VFD--KPN--TIALSPDGK-YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQ 402 (433)
T ss_dssp EEETTTTEEEEEEE-CSS--SEE--EEEECTTSS-EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSS
T ss_pred EEECCCCcEEEEec-CCC--CCC--eEEEcCCCC-EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCC
Confidence 99999877666554 222 223 335799998 6666655 57999999999998888887778
Q ss_pred EEEEEECCCC-EEEEEe-CCCeEEEEeCCC
Q 016134 364 VRVIEIGPDK-LFFTGD-GAGMLGVWKLLA 391 (394)
Q Consensus 364 v~~l~~sp~~-~l~tgs-~Dg~I~vWd~~~ 391 (394)
+.+++|+|++ +|++++ .|+.|++|+++.
T Consensus 403 ~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 403 PTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999999 777766 599999999863
No 116
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=1.1e-25 Score=218.31 Aligned_cols=216 Identities=11% Similarity=0.121 Sum_probs=171.9
Q ss_pred ccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCc------------EEEecCCC------------CcEEEEEEcCC-
Q 016134 172 GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSA------------EFSLDGPV------------GEVYSMVVANE- 224 (394)
Q Consensus 172 ~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~------------~~~~~~~~------------~~v~~l~~~~~- 224 (394)
.|.+.|++++|+|++++|++|+.|+. |||+.+++ ...+.+|. ..|.+++|+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 36899999999999999999999998 69999876 33667887 88999999986
Q ss_pred ---EEEEEecC----------------------------------------------------------CCCCCEEEEEe
Q 016134 225 ---MLFAGAQD----------------------------------------------------------GHTRPVTCLAV 243 (394)
Q Consensus 225 ---~l~~~~~~----------------------------------------------------------~h~~~V~~l~~ 243 (394)
.+++++.| +|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 46666543 48888999999
Q ss_pred c--CCeEEEEeCCCeEEEEeCCC-CceeE-------EEcCCCCCcEEEEEc--C-CEEEEEeCCCcEEEEEeCCCce---
Q 016134 244 G--RSRLCSGSMDNTIRVWELDT-LEPVM-------TLNDHTDAPMSLLCW--D-QFLLSCSLDHTIKVWFATGRGN--- 307 (394)
Q Consensus 244 ~--~~~l~sgs~Dg~V~iwd~~~-~~~~~-------~~~~h~~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~~~~--- 307 (394)
+ +++|++| .|+.|++||+++ .+++. .+.+|...|.+++|+ + .+|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 7 6789998 799999999984 44444 256799999999999 5 7999999999999999998775
Q ss_pred -eeEeecccCC----------cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC-CceeEEEecCCc------------
Q 016134 308 -LEAAYTHKED----------NGVLALGGLNDPDGKPVLICACNDNTVHLYELPS-FMERGRIFSKHE------------ 363 (394)
Q Consensus 308 -~~~~~~~~~~----------~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~-~~~~~~~~~~~~------------ 363 (394)
...+..+... ..+. ++.|+|+++ +|++++. +.|+|||+++ ++.+..+.....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~s~~g~-~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 340 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSIS--DVKFSHSGR-YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYEND 340 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEE--EEEECTTSS-EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTS
T ss_pred eeeEeccCCCccccccccccCceEE--EEEECCCCC-EEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccc
Confidence 4555554431 1233 335799999 8899988 9999999997 666666654322
Q ss_pred ----EEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 364 ----VRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 364 ----v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+..++|+|++ +|++++.||.|++||+.+.
T Consensus 341 ~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 341 CIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 3349999999 9999999999999999765
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=2.9e-25 Score=210.02 Aligned_cols=225 Identities=9% Similarity=0.035 Sum_probs=155.9
Q ss_pred EEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCC--EE-EEEecC
Q 016134 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANE--ML-FAGAQD 232 (394)
Q Consensus 157 iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l-~~~~~~ 232 (394)
||++.+. +++.++..|...|++++|+||+++|++|+.|+. |||+++++........ .+..+.+.++ .+ ++++.+
T Consensus 3 i~s~~~~-~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 3 LGSMITR-NPIVPENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp -----------------CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSST
T ss_pred ccccccc-CCccccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCc
Confidence 3444444 567778999999999999999999999998886 7999887765332221 3444555443 33 344433
Q ss_pred -----------------CCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCC-ceeEEEcCCCCCcEEEEEcCCEEEE--Ee
Q 016134 233 -----------------GHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTL-EPVMTLNDHTDAPMSLLCWDQFLLS--CS 292 (394)
Q Consensus 233 -----------------~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~-~~~~~~~~h~~~v~~l~~~~~~l~s--~s 292 (394)
.|...|.++.++++.++++. |+.|++||+.+. +.+.++.. +...+++...+++. ++
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~~~la~~sg~ 156 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSNGLLVYSNEF 156 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEETTEEEEEESS
T ss_pred cEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEccEEEEeCCC
Confidence 35668888888877766654 778999998887 66555543 22233334466666 47
Q ss_pred CCCcEEEEEeCCCc----------------eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCe-EEEEECCCCcee
Q 016134 293 LDHTIKVWFATGRG----------------NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNT-VHLYELPSFMER 355 (394)
Q Consensus 293 ~Dg~i~vwd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~-I~iwd~~~~~~~ 355 (394)
.||.|++||++++. .+..+..|...+..+ .|+|+++ +|++++.|++ |+|||+++++.+
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~----~~s~~g~-~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMV----RLNRKSD-MVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEE----EECTTSS-EEEEEETTCSEEEEEETTTCCEE
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEE----EECCCCC-EEEEEeCCCCEEEEEECCCCcEE
Confidence 89999999998754 145566665443333 4699998 9999999998 999999999999
Q ss_pred EEEe---cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 356 GRIF---SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 356 ~~~~---~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
..+. +...|++++|+|++ +|++++.|+.|++||+...
T Consensus 232 ~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 232 REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9887 57789999999999 9999999999999999754
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.7e-25 Score=208.88 Aligned_cols=231 Identities=10% Similarity=0.032 Sum_probs=170.9
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCC
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGP 212 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~ 212 (394)
+..++..+++++.+| .|++||+.++ +.+..+. ...|.++.|+|+ +++++.|++ +|+........ ...
T Consensus 44 ~~~d~~~l~sg~~Dg----~v~iwd~~~~-~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~-~~~ 112 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDG----ALHFTQLKDS-KTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITIL-DSK 112 (343)
T ss_dssp SSEEEEEEEEEEETT----EEEEEEESSS-SCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEE-ETT
T ss_pred hcCCCCEEEEECCCC----cEEEEECCCC-cEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEe-ecC
Confidence 445667777777666 9999999887 5556655 577888999988 999999998 58776422111 111
Q ss_pred CCcEEEEEEcCCEEEEEecCCCCCCEEEEEec----CCeEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCcEEEEEc--C
Q 016134 213 VGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG----RSRLCSGSMDNTIRVWELDTLEPVMTLND-HTDAPMSLLCW--D 285 (394)
Q Consensus 213 ~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~----~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~--~ 285 (394)
... ++.....+|...|.+++|+ +++|++++.|++|++||+++++++..+.. |...|.+++|+ +
T Consensus 113 ~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg 182 (343)
T 3lrv_A 113 TNK----------VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS 182 (343)
T ss_dssp TCC----------EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS
T ss_pred Ccc----------eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC
Confidence 111 1111222677789999886 46899999999999999999998777644 55689999998 7
Q ss_pred CEEEEEeCCCcEEEEEeCCCcee-eEeec-ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---
Q 016134 286 QFLLSCSLDHTIKVWFATGRGNL-EAAYT-HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS--- 360 (394)
Q Consensus 286 ~~l~s~s~Dg~i~vwd~~~~~~~-~~~~~-~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--- 360 (394)
.+|++|+.|+.|++||+++++.+ ..+.. |... +.+ +.|+|++. +|++++ |+.|+|||+++.+....+..
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~--v~~--l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAK--IKE--VKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAYPTYTI 256 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSC--EEE--EEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSSCCCBC
T ss_pred CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCC--EEE--EEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceeeccccc
Confidence 89999999999999999998877 55555 4433 333 34699998 888888 45999999998866543321
Q ss_pred -CCcE--EEEEECCCC-EEEEEeC-CCeEEEEeCCCC
Q 016134 361 -KHEV--RVIEIGPDK-LFFTGDG-AGMLGVWKLLAK 392 (394)
Q Consensus 361 -~~~v--~~l~~sp~~-~l~tgs~-Dg~I~vWd~~~~ 392 (394)
...+ .+++|+|++ +|++++. |+.|++|++...
T Consensus 257 ~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 257 PEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp -----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc
Confidence 1222 469999999 9999888 999999998654
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.7e-25 Score=213.53 Aligned_cols=231 Identities=9% Similarity=0.083 Sum_probs=181.0
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc--eEEEEec----------------------------------
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL--TMLAKLE---------------------------------- 171 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~--~~~~~l~---------------------------------- 171 (394)
.+.++. +++++.+++++ ..+ .|++||+.++. +.+..+.
T Consensus 6 p~~~v~-~s~dg~~l~~~-~~~----~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 6 PLQNLL-TSRDGSLVFAI-IKN----CILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp CCCEEE-ECSSSSEEEEE-ETT----EEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cEEEEE-ecCCCCEEEEE-eCC----eEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 456777 99999876644 333 89999998773 1444444
Q ss_pred --------------------ccCCCeEEEEecCCCCEE-EEEeCCCc--eeecC--CCcEEEecCCCCcEEEEEEcCCEE
Q 016134 172 --------------------GHEKAVSGIALPLRSDKL-FSGSRDGT--AWNIE--SSAEFSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 172 --------------------~h~~~V~~l~~s~~~~~l-~sgs~Dg~--vWd~~--~~~~~~~~~~~~~v~~l~~~~~~l 226 (394)
+|.+.|++++|+|++++| ++++.|+. |||+. +++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~--------------- 144 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK--------------- 144 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE---------------
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee---------------
Confidence 344479999999999996 89999998 69998 666553210
Q ss_pred EEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeE----EEcCCCCCcEEEEEcCC-----EEEEEeCCC
Q 016134 227 FAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVM----TLNDHTDAPMSLLCWDQ-----FLLSCSLDH 295 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~----~~~~h~~~v~~l~~~~~-----~l~s~s~Dg 295 (394)
...|...|.+++|+ +.+|++++.|+.|++|++.+++... .+.+|...|.+++|+.. +|++++.|+
T Consensus 145 ----~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~ 220 (450)
T 2vdu_B 145 ----RFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE 220 (450)
T ss_dssp ----EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS
T ss_pred ----cccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC
Confidence 01456778888887 6789999999999999998876543 67789999999999833 899999999
Q ss_pred cEEEEEeCCCceeeEee-cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec--------------
Q 016134 296 TIKVWFATGRGNLEAAY-THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-------------- 360 (394)
Q Consensus 296 ~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------------- 360 (394)
.|++||+++++.+..+. .|... +.++ .|+ ++. +|++++.|+.|+|||+.+++.+..+..
T Consensus 221 ~i~vwd~~~~~~~~~~~~~h~~~--v~~~--~~s-d~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (450)
T 2vdu_B 221 HIKISHYPQCFIVDKWLFGHKHF--VSSI--CCG-KDY-LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLA 294 (450)
T ss_dssp CEEEEEESCTTCEEEECCCCSSC--EEEE--EEC-STT-EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC
T ss_pred cEEEEECCCCceeeeeecCCCCc--eEEE--EEC-CCC-EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccc
Confidence 99999999888776643 45433 3333 357 888 999999999999999999988777752
Q ss_pred ------------CCcEEEEEECCCC-EEEEEe-CCCeEEEEeC
Q 016134 361 ------------KHEVRVIEIGPDK-LFFTGD-GAGMLGVWKL 389 (394)
Q Consensus 361 ------------~~~v~~l~~sp~~-~l~tgs-~Dg~I~vWd~ 389 (394)
...|..++|+|++ +|++++ .|+.|++|++
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 2458999999999 888888 8999999999
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=2.3e-26 Score=220.65 Aligned_cols=249 Identities=11% Similarity=0.033 Sum_probs=167.0
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccc--------cccccCCCeecCCCCCe
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNV--------CCHWLLGNCVRGDECRF 154 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~--------~~~~~~~~~~~g~~~~~ 154 (394)
++..++++|.|+++||||++++...... ......||...|.+++ |+| ++.+|++++.|+ +
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~-------~~~~~~gH~~~v~~v~-~~p~~~~~~~~d~~~las~s~D~----t 167 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQH-------VLGGKSGHHNFVNDID-IADVYSADNRLAEQVIASVGDDC----T 167 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEE-------EECTTTSCSSCEEEEE-EEEEECTTCSEEEEEEEEEETTS----E
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceee-------eecccCCCCCceEEEE-EccccccccCCCCCEEEEEECCC----e
Confidence 5567899999999999999987642110 1124679999999999 987 678888776665 9
Q ss_pred EEEEEcCCCceEEEEecccCCCeEEEEecCCC-CEEEEEeCCCc--eeecCCCcEEEe-cC----CCCcEEEEEEcCCEE
Q 016134 155 LHSWFCGEGLTMLAKLEGHEKAVSGIALPLRS-DKLFSGSRDGT--AWNIESSAEFSL-DG----PVGEVYSMVVANEML 226 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~l~sgs~Dg~--vWd~~~~~~~~~-~~----~~~~v~~l~~~~~~l 226 (394)
|+|||+.++ .++..+.+|...|.+++|+|++ .+|++++.|++ +||+.+++.... .. +...+....+.+. .
T Consensus 168 v~~Wd~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~-~ 245 (393)
T 4gq1_A 168 LIIWRLTDE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPL-V 245 (393)
T ss_dssp EEEEEEETT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGG-C
T ss_pred EEEEECCCC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccc-e
Confidence 999999877 6667778899999999999987 58999999999 699998876521 11 1112222222221 1
Q ss_pred EEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEE------------------c-
Q 016134 227 FAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC------------------W- 284 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~------------------~- 284 (394)
......+|...|.++.|. +..|++++.|+++++||+.+++....+..|...+..+.+ +
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHP 325 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECS
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEcc
Confidence 222334789999999985 689999999999999999987776666665544443322 2
Q ss_pred ---CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 285 ---DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 285 ---~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
+.++++++.|++|++||+.+++.......+... +. .++|+|+|+ +||+++.+| +.+|.+..
T Consensus 326 ~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~--V~--svafspdG~-~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 326 RYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMP--IV--DFCWHQDGS-HLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSC--EE--EEEECTTSS-EEEEEESSE-EEEEEEGG
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCc--EE--EEEEcCCCC-EEEEEeCCC-eEEEEEeC
Confidence 236777889999999999998887777766543 33 334799999 899998665 66666543
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.5e-24 Score=212.12 Aligned_cols=223 Identities=11% Similarity=0.063 Sum_probs=170.5
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCC-----CeEEEEecCCCCEEEEEeCCCc-
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEK-----AVSGIALPLRSDKLFSGSRDGT- 197 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~-----~V~~l~~s~~~~~l~sgs~Dg~- 197 (394)
++...|.+++ |+|++.++|+++.+| .|++||.+. ++..+. |.. .|.+++|+|||++|++|+.||+
T Consensus 83 ~~~~~V~~va-wSPdG~~LAs~s~dg----~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV 153 (588)
T 2j04_A 83 QPVCYPRVCK-PSPIDDWMAVLSNNG----NVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL 153 (588)
T ss_dssp SCSCCEEEEE-ECSSSSCEEEEETTS----CEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE
T ss_pred CCCCcEEEEE-ECCCCCEEEEEeCCC----cEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE
Confidence 3366899999 999999999888887 899999543 667777 776 4999999999999999999999
Q ss_pred -eeecCCCcE-------E-EecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCce-
Q 016134 198 -AWNIESSAE-------F-SLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEP- 267 (394)
Q Consensus 198 -vWd~~~~~~-------~-~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~- 267 (394)
|||+.++.. + .+..+ ..+|...|.+++|+++-+++++.|++|++||+.+++.
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~------------------~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLS------------------DAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECS------------------CTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSC
T ss_pred EEEECCCCccccccceeeeeeecc------------------cccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccc
Confidence 699998752 1 22111 1268889999999844499999999999999988773
Q ss_pred --eEEE-cCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeE--CCCCCcEEEEEeCCC
Q 016134 268 --VMTL-NDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLN--DPDGKPVLICACNDN 342 (394)
Q Consensus 268 --~~~~-~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~g~~~l~sgs~dg 342 (394)
.+++ .+|...|.+++|+++.||+++ +++|++||+..++.......|......+ .+ +|++. .|+++++||
T Consensus 216 ~~~~tL~~~h~~~V~svaFsg~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~v----a~~~s~d~~-~La~a~edG 289 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIVDYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHII----PLNHEKEST-ILLMSNKTS 289 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEETTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEE----EETTCSSCE-EEEECSSCE
T ss_pred cceeeecccccCcEEEEEEECCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEE----EeeeCCCCC-EEEEEcCCC
Confidence 3567 478899999999988999987 6999999998766544443555444433 36 88887 899999999
Q ss_pred eEEEEECCCCc-----------------------eeEEEecCCcEEEEEECCCC-EEEEEeC
Q 016134 343 TVHLYELPSFM-----------------------ERGRIFSKHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 343 ~I~iwd~~~~~-----------------------~~~~~~~~~~v~~l~~sp~~-~l~tgs~ 380 (394)
+ ++|...... ....+.+...|.+++|+||| .+|+++.
T Consensus 290 ~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 290 Y-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp E-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred C-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCCEEEEEEe
Confidence 9 999875211 11111112248999999999 8887763
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=4.9e-24 Score=196.61 Aligned_cols=243 Identities=9% Similarity=-0.047 Sum_probs=169.9
Q ss_pred CCCcccccccCCCC-------CCCCCCCCCCcccccc-------CCCCc--cceeeecccccc----ccccCCCee----
Q 016134 92 EDRIPHVRNRENPG-------YTGPKNSSSASSTVSD-------ESGDK--STSKKTTLKNVC----CHWLLGNCV---- 147 (394)
Q Consensus 92 ~d~~~~~w~~~~~~-------~~~~~~s~~~~~~~~~-------~~g~~--~~v~~~~~~~~~----~~~~~~~~~---- 147 (394)
...++++|+...+. ...+..++..+..... ..|+- +.|++++ ++|+ +.+++.+..
T Consensus 61 ~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla-~spd~~~~~~~l~s~g~~~~v 139 (356)
T 2w18_A 61 CEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF-CSSDDESEKQVLLKSGNIKAV 139 (356)
T ss_dssp ESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC-C------CCEEEEEEEEEEEE
T ss_pred ccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE-ECCCccccccEEEeCCCeEEE
Confidence 35678888888762 1233333333332221 11322 5788888 9999 888876543
Q ss_pred ------------cCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecC---CCCEEEEEeCCCc--eeecCCCcEE-Ee
Q 016134 148 ------------RGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPL---RSDKLFSGSRDGT--AWNIESSAEF-SL 209 (394)
Q Consensus 148 ------------~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~---~~~~l~sgs~Dg~--vWd~~~~~~~-~~ 209 (394)
...-++.|++|++.+..+.+..+.+|...++.++|++ ++++|++++.|++ |||+++++++ .+
T Consensus 140 ~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 140 LGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp EEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 1224789999999554478888889999999999999 7799999999999 6999999987 44
Q ss_pred cCCC---CcEEEEEEcCC--EEEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEE-----cCCCCCcE
Q 016134 210 DGPV---GEVYSMVVANE--MLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTL-----NDHTDAPM 279 (394)
Q Consensus 210 ~~~~---~~v~~l~~~~~--~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~-----~~h~~~v~ 279 (394)
.++. ..+.+++|+|+ .+++++.+ ..+ ..+++|+.|++|++||..+++++..+ .+|...+.
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~---~~~-------w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~l 289 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHP---CAK-------ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFL 289 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC----------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEE
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccC---CCc-------ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeE
Confidence 4433 35667788887 33333321 111 25789999999999999999988766 47777776
Q ss_pred EEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEEC
Q 016134 280 SLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYEL 349 (394)
Q Consensus 280 ~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~ 349 (394)
+..+.+.++++++.|++|+|||+.+++.+.++..|...... .+.|+|+|+ +|++|+.|++|+|||+
T Consensus 290 sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs---~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 290 EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS---FVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC---EEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred ccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE---EEEECCCCC-EEEEEECCCcEEEecC
Confidence 67777899999999999999999999999888766543322 124699999 9999999999999996
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=3.7e-24 Score=207.64 Aligned_cols=240 Identities=17% Similarity=0.209 Sum_probs=178.3
Q ss_pred ccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccccccc-ccCCCeecCCCCCeEEEEEcCC
Q 016134 84 NLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCH-WLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 84 ~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~-~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
...+++++.|+.|++|++.+...... ............+|...+.++. |+|.+. ++++++.+| .|++|++.+
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~--~~~~~~~~~~~~~h~~~v~~l~-~~~~~~~~l~s~~~dg----~i~vwd~~~ 213 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPE--PSGECQPDLRLRGHQKEGYGLS-WNPNLNGYLLSASDDH----TICLWDINA 213 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCC--TTCCCCCSEEEECCSSCCCCEE-ECTTSTTEEEEECTTS----CEEEEETTS
T ss_pred CcEEEEECCCCcEEEEECCCcccccC--ccccCCCcEEecCCCCCeEEEE-eCCCCCCeEEEEeCCC----eEEEEeCCC
Confidence 45788999999999999986321110 0000111123457888899999 999887 776655554 999999976
Q ss_pred Cc------eEEEEecccCCCeEEEEecC-CCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCC
Q 016134 163 GL------TMLAKLEGHEKAVSGIALPL-RSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDG 233 (394)
Q Consensus 163 ~~------~~~~~l~~h~~~V~~l~~s~-~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~ 233 (394)
+. .....+.+|...|.+++|+| ++.+|++++.|+. +||++++.... .+. ....
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~------~~~------------~~~~ 275 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSK------PSH------------TVDA 275 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSS------CSE------------EEEC
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCc------cee------------Eeec
Confidence 31 22567789999999999999 7789999999999 69998763100 000 1126
Q ss_pred CCCCEEEEEec--C-CeEEEEeCCCeEEEEeCCC-CceeEEEcCCCCCcEEEEEc--C-CEEEEEeCCCcEEEEEeCCC-
Q 016134 234 HTRPVTCLAVG--R-SRLCSGSMDNTIRVWELDT-LEPVMTLNDHTDAPMSLLCW--D-QFLLSCSLDHTIKVWFATGR- 305 (394)
Q Consensus 234 h~~~V~~l~~~--~-~~l~sgs~Dg~V~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~~- 305 (394)
|...|++++|+ + .+|++|+.|+.|++||+++ .+++..+..|...|.++.|+ + .+|++++.|+.|++||+...
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 77888888887 3 3699999999999999998 56788999999999999998 4 57999999999999999862
Q ss_pred -------------ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 306 -------------GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 306 -------------~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
+.+..+..|... +.. +.|+|++..+|++++.|+.|+||++...
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~h~~~--v~~--~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 356 EEQSTEDAEDGPPELLFIHGGHTAK--ISD--FSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCCCHHHHHHCCTTEEEECCCCSSC--EEE--EEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCccccccCCcceEEEcCCCCCC--ceE--EEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 333333333332 333 3469998878999999999999998753
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.2e-23 Score=218.22 Aligned_cols=202 Identities=18% Similarity=0.219 Sum_probs=158.5
Q ss_pred EEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec
Q 016134 167 LAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG 244 (394)
Q Consensus 167 ~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~ 244 (394)
+..+.+|.+.|++++|+|++++|++|+.||. |||+..+..... ....+|...|.+++|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~-------------------~~l~~h~~~V~~l~~s 62 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLI-------------------DTLTGHEGPVWRVDWA 62 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEE-------------------EEECCCSSCEEEEEEC
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccc-------------------eeccCCcCceEEEEec
Confidence 4577899999999999999999999999998 699875432211 1233788888888886
Q ss_pred ----CCeEEEEeCCCeEEEEeCCCCc--eeEEEcCCCCCcEEEEEc----CCEEEEEeCCCcEEEEEeCCCceee--Eee
Q 016134 245 ----RSRLCSGSMDNTIRVWELDTLE--PVMTLNDHTDAPMSLLCW----DQFLLSCSLDHTIKVWFATGRGNLE--AAY 312 (394)
Q Consensus 245 ----~~~l~sgs~Dg~V~iwd~~~~~--~~~~~~~h~~~v~~l~~~----~~~l~s~s~Dg~i~vwd~~~~~~~~--~~~ 312 (394)
+++|++|+.||.|++||+++++ .+..+..|...|.++.|+ +.+|++++.|+.|++||++...... .+.
T Consensus 63 ~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~ 142 (753)
T 3jro_A 63 HPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID 142 (753)
T ss_dssp CTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE
T ss_pred CCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee
Confidence 6789999999999999999887 778888999999999998 5699999999999999998764333 333
Q ss_pred cccCCcceEEEEeeECC-------------CCCcEEEEEeCCCeEEEEECCCCc----eeEEEe-cCCcEEEEEECCC--
Q 016134 313 THKEDNGVLALGGLNDP-------------DGKPVLICACNDNTVHLYELPSFM----ERGRIF-SKHEVRVIEIGPD-- 372 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~-------------~g~~~l~sgs~dg~I~iwd~~~~~----~~~~~~-~~~~v~~l~~sp~-- 372 (394)
.+. ..+.++ .|+| ++. +|++++.||.|++||++++. ....+. +...|++++|+|+
T Consensus 143 ~~~--~~v~~l--~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 143 AHA--IGVNSA--SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (753)
T ss_dssp CCS--SCEEEE--EECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred cCC--CceEEE--EecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC
Confidence 333 333333 3577 466 89999999999999998874 333333 2667999999999
Q ss_pred -C-EEEEEeCCCeEEEEeCCCC
Q 016134 373 -K-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 373 -~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+ +|++++.||.|++||+.+.
T Consensus 218 ~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 218 LRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp SSEEEEEEESSSCEEEEEESSS
T ss_pred CCCEEEEEecCCEEEEecCCCC
Confidence 8 9999999999999998764
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=8.7e-23 Score=197.20 Aligned_cols=260 Identities=11% Similarity=0.039 Sum_probs=192.6
Q ss_pred cCCCCCcccccccCC--CCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceE
Q 016134 89 SGSEDRIPHVRNREN--PGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTM 166 (394)
Q Consensus 89 s~s~d~~~~~w~~~~--~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~ 166 (394)
+++.|+.+++|.++. +.+.... ....+ ..+.+++ ++|.+.+++++.. ++.|++||+.++ +.
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~----------~~~~~-~~~~~~~-~s~~~~~~~~~~~----~~~i~~~d~~~g-~~ 156 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFIS----------RFKTG-FQPKSVR-FIDNTRLAIPLLE----DEGMDVLDINSG-QT 156 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEE----------EEECS-SCBCCCE-ESSSSEEEEEBTT----SSSEEEEETTTC-CE
T ss_pred cccCCCceEEEEECCCCCcceEEE----------EEcCC-CCceEEE-EeCCCeEEEEeCC----CCeEEEEECCCC-eE
Confidence 566777777776654 3211100 01111 1234566 7886666665443 448999999887 45
Q ss_pred EE-----EecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEE
Q 016134 167 LA-----KLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVT 239 (394)
Q Consensus 167 ~~-----~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~ 239 (394)
+. .+.+|...|.+++|+++++++++++.|+. +||+++++..... ..|...+.
T Consensus 157 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~---------------------~~~~~~~~ 215 (433)
T 3bws_A 157 VRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV---------------------DLTGKWSK 215 (433)
T ss_dssp EEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE---------------------ECSSSSEE
T ss_pred eeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE---------------------cCCCCCee
Confidence 55 45689999999999999999999999998 6999887765311 14566777
Q ss_pred EEEec--CCeE-EEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe--------CCCcEEEEEeCCCc
Q 016134 240 CLAVG--RSRL-CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS--------LDHTIKVWFATGRG 306 (394)
Q Consensus 240 ~l~~~--~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s--------~Dg~i~vwd~~~~~ 306 (394)
+++|+ ++.+ ++++.|+.|++||+++++.+..+..+ ..+.+++++ +++|++++ .|+.|++||+++++
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 77776 4555 55568999999999999988888754 458999998 67888887 58899999999876
Q ss_pred eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeC-----
Q 016134 307 NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDG----- 380 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~----- 380 (394)
.+..+. +.. ... .+.|+|+++.++++++.|+.|++||+.+++.+..+.....+.+++|+|++ +|++++.
T Consensus 295 ~~~~~~-~~~--~~~--~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 369 (433)
T 3bws_A 295 LIDTIG-PPG--NKR--HIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHP 369 (433)
T ss_dssp EEEEEE-EEE--CEE--EEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCT
T ss_pred EEeecc-CCC--Ccc--eEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCcc
Confidence 655542 222 222 33479999867788899999999999999888888878889999999999 7777776
Q ss_pred ----------CCeEEEEeCCCC
Q 016134 381 ----------AGMLGVWKLLAK 392 (394)
Q Consensus 381 ----------Dg~I~vWd~~~~ 392 (394)
||.|++||+.+.
T Consensus 370 ~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 370 TEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp TTCTTSCCSSCCEEEEEETTTT
T ss_pred ccccccccccceEEEEEECCCC
Confidence 579999998753
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.91 E-value=2.3e-21 Score=184.61 Aligned_cols=214 Identities=10% Similarity=0.101 Sum_probs=169.4
Q ss_pred CCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEE-EEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCE
Q 016134 149 GDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKL-FSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 149 g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
++.++.|++||+.++ +++..+..|. .+.+++|+|++++| ++++.|+. +||+++++.+.....
T Consensus 8 ~~~d~~v~v~d~~~~-~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~------------- 72 (391)
T 1l0q_A 8 NSESDNISVIDVTSN-KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA------------- 72 (391)
T ss_dssp ETTTTEEEEEETTTT-EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-------------
T ss_pred cCCCCEEEEEECCCC-eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC-------------
Confidence 445669999999887 7788888775 48999999999987 67778888 699998887643221
Q ss_pred EEEEecCCCCCCEEEEEec--CCeE-EEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEE-EEEeCCCcEEE
Q 016134 226 LFAGAQDGHTRPVTCLAVG--RSRL-CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFL-LSCSLDHTIKV 299 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~--~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~Dg~i~v 299 (394)
...+.+++|+ +++| ++++.|+.|++||+.+++.+..+..+ ..+.+++|+ +++| ++++.|+.|++
T Consensus 73 ---------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 73 ---------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp ---------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ---------CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 2266777776 4555 45567799999999999988888754 568999998 5666 68888999999
Q ss_pred EEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEE
Q 016134 300 WFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTG 378 (394)
Q Consensus 300 wd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tg 378 (394)
||+.+++.+..+..+.. .. .+.|+|+++.++++++.|+.|++||+++++....+.....+.+++|+|++ +|+++
T Consensus 143 ~d~~~~~~~~~~~~~~~---~~--~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 143 INTVTKAVINTVSVGRS---PK--GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp EETTTTEEEEEEECCSS---EE--EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEE
T ss_pred EECCCCcEEEEEecCCC---cc--eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEE
Confidence 99998877766654432 22 33479999855578889999999999999888888777789999999999 77777
Q ss_pred e---CCCeEEEEeCCCC
Q 016134 379 D---GAGMLGVWKLLAK 392 (394)
Q Consensus 379 s---~Dg~I~vWd~~~~ 392 (394)
+ .++.|++||+.+.
T Consensus 218 ~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EECSSCCEEEEEETTTT
T ss_pred ecCcCCCcEEEEECCCC
Confidence 7 7899999998754
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=5.7e-22 Score=191.48 Aligned_cols=255 Identities=10% Similarity=-0.016 Sum_probs=178.6
Q ss_pred ccccccc--CCCCCCCCCCCCCCccccccCCCCccceeeecccccc--------------ccccCCCeecCCC--CCeEE
Q 016134 95 IPHVRNR--ENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVC--------------CHWLLGNCVRGDE--CRFLH 156 (394)
Q Consensus 95 ~~~~w~~--~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~--------------~~~~~~~~~~g~~--~~~i~ 156 (394)
++++||+ .++...... ...+|...++.++ +++. +..++..+.+.+. .+.|+
T Consensus 94 ~i~lwd~~~~~~~~~~~~----------~~~~~~~~~~~~~-~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~ 162 (415)
T 2hqs_A 94 AYQLVDTGGAPGTVLAQN----------SYKVNKQWLRYAG-HTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELR 162 (415)
T ss_dssp EEEEEECSSSTTCEEEEE----------EEEECGGGHHHHH-HHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEE
T ss_pred EEEEEeCCCCCCCEEeee----------EEEcChhHHHHHH-HHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEE
Confidence 8999999 777643111 2445555666655 5542 3344443333221 16999
Q ss_pred EEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCC---c--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 157 SWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG---T--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 157 iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg---~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
+||+... ..+.+.+|...|.+++|+|++++|++++.|+ . +||+++++...+..+
T Consensus 163 i~d~~g~--~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~------------------- 221 (415)
T 2hqs_A 163 VSDYDGY--NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF------------------- 221 (415)
T ss_dssp EEETTSC--SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-------------------
T ss_pred EEcCCCC--CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-------------------
Confidence 9999743 4677788999999999999999999999886 3 699999887655444
Q ss_pred CCCCCCEEEEEec--CCeEE-EEeCCC--eEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC-CC--cEEEEE
Q 016134 232 DGHTRPVTCLAVG--RSRLC-SGSMDN--TIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL-DH--TIKVWF 301 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~~~l~-sgs~Dg--~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-Dg--~i~vwd 301 (394)
...+.+++|+ ++.|+ +++.|+ .|++||+++++. ..+..|...+.++.|+ +++|++++. ++ .|.+||
T Consensus 222 ---~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 222 ---PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ---SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ---CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 3455556665 45555 666555 499999998776 5677788899999998 778888776 44 677778
Q ss_pred eCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC---CeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEE
Q 016134 302 ATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND---NTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d---g~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~t 377 (394)
+.+++.. .+..+. . ......|+|+|+ +|++++.+ ..|++||+.+++.. .+.....+.+++|+|++ +|++
T Consensus 298 ~~~~~~~-~l~~~~--~--~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 298 INGGAPQ-RITWEG--S--QNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIY 370 (415)
T ss_dssp TTSSCCE-ECCCSS--S--EEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEE
T ss_pred CCCCCEE-EEecCC--C--cccCeEECCCCC-EEEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEE
Confidence 8766532 222222 1 223446799999 66666543 58999999988764 33334479999999999 7888
Q ss_pred EeCCC---eEEEEeCCCC
Q 016134 378 GDGAG---MLGVWKLLAK 392 (394)
Q Consensus 378 gs~Dg---~I~vWd~~~~ 392 (394)
++.|+ .|.+||+..+
T Consensus 371 ~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 371 SSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEETTEEEEEEEETTSC
T ss_pred EEcCCCccEEEEEECCCC
Confidence 87776 7999998654
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=5.6e-21 Score=190.63 Aligned_cols=285 Identities=9% Similarity=0.041 Sum_probs=206.3
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEc--
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFC-- 160 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~-- 160 (394)
++..+++++.|++|.+||.+++..... ...|+. +..++ ++|++.++.+++.+ +.|++||+
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~-----------i~~g~~--~~~v~-~spdg~~l~v~~~d----~~V~v~D~~~ 209 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKV-----------IDTGYA--VHISR-MSASGRYLLVIGRD----ARIDMIDLWA 209 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEE-----------EECSTT--EEEEE-ECTTSCEEEEEETT----SEEEEEETTS
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEE-----------EecCcc--cceEE-ECCCCCEEEEECCC----CeEEEEECcC
Confidence 566778889999999999998876431 222443 67777 99999999877655 49999999
Q ss_pred CCCceEEEEecccCCCeEEEEecC----CCCEEEEEeC-CCc--eeecCCCcEEEe-cC-----------CCCcEEEEEE
Q 016134 161 GEGLTMLAKLEGHEKAVSGIALPL----RSDKLFSGSR-DGT--AWNIESSAEFSL-DG-----------PVGEVYSMVV 221 (394)
Q Consensus 161 ~~~~~~~~~l~~h~~~V~~l~~s~----~~~~l~sgs~-Dg~--vWd~~~~~~~~~-~~-----------~~~~v~~l~~ 221 (394)
.++ +++.++. +...+..++|+| ++++|++++. +++ |||..+++.+.. .. +...+..+.+
T Consensus 210 ~t~-~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 210 KEP-TKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp SSC-EEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred CCC-cEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 665 7777777 455689999999 9999999985 666 699999887632 22 1236888999
Q ss_pred cCC--EEEEEecC--------------------CCCCCEEEEEec--CCeEEEE-eCCCeEEEEeCCCCceeEEEcC---
Q 016134 222 ANE--MLFAGAQD--------------------GHTRPVTCLAVG--RSRLCSG-SMDNTIRVWELDTLEPVMTLND--- 273 (394)
Q Consensus 222 ~~~--~l~~~~~~--------------------~h~~~V~~l~~~--~~~l~sg-s~Dg~V~iwd~~~~~~~~~~~~--- 273 (394)
+++ .+++...+ .+...+..+.|+ +++|+++ ..+++|.+||+++++++..+..
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC
Confidence 885 33332221 122344456776 5665554 5689999999999999988874
Q ss_pred -CCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCC-------CceeeEeecccCCcceEEEEeeECCCCCcEEEEEe---
Q 016134 274 -HTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATG-------RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC--- 339 (394)
Q Consensus 274 -h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs--- 339 (394)
|.+....+... +.+++++. .|++|.+||+.+ .+.++.+..+......+ .++|+++ .|.+++
T Consensus 368 ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v----~~~pdg~-~l~v~~~~~ 442 (543)
T 1nir_A 368 PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFI----KTHPKSS-HLYVDTTFN 442 (543)
T ss_dssp BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCE----ECCTTCC-EEEECCTTC
T ss_pred CCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEE----EcCCCCC-cEEEecCCC
Confidence 65555554322 45666665 589999999987 67777777665433323 3599999 777776
Q ss_pred ----CCCeEEEEECCCCcee-EEE---------ecCCcEEEEEECCCC-EEEEE-----eCCCeEEEEeCCCC
Q 016134 340 ----NDNTVHLYELPSFMER-GRI---------FSKHEVRVIEIGPDK-LFFTG-----DGAGMLGVWKLLAK 392 (394)
Q Consensus 340 ----~dg~I~iwd~~~~~~~-~~~---------~~~~~v~~l~~sp~~-~l~tg-----s~Dg~I~vWd~~~~ 392 (394)
.+++|.|||+.+++.. ..+ .+...+..++|+|+| .|+.+ +.|+.|.|||..+.
T Consensus 443 ~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~ 515 (543)
T 1nir_A 443 PDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTL 515 (543)
T ss_dssp SSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCc
Confidence 2679999999999877 333 125679999999999 55544 24899999998764
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=3.2e-19 Score=172.12 Aligned_cols=242 Identities=10% Similarity=-0.007 Sum_probs=173.4
Q ss_pred ccccccCCCC------CcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEE
Q 016134 84 NLWVSSGSED------RIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHS 157 (394)
Q Consensus 84 ~~~~~s~s~d------~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~i 157 (394)
+.+++..+.+ +++++||+++.... ...+|...+.+++ |+|++.+++..+.++. ...|++
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~-------------~l~~~~~~v~~~~-~Spdg~~la~~s~~~~-~~~i~~ 207 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQF-------------VVHRSPQPLMSPA-WSPDGSKLAYVTFESG-RSALVI 207 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCE-------------EEEEESSCEEEEE-ECTTSSEEEEEECTTS-SCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCE-------------EEeCCCCcceeeE-EcCCCCEEEEEEecCC-CcEEEE
Confidence 4455554443 79999999854321 2345566788898 9999999988776542 358999
Q ss_pred EEcCCCceEEEEecccCCCeEEEEecCCCCEEE-EEeCCCc----eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecC
Q 016134 158 WFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLF-SGSRDGT----AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQD 232 (394)
Q Consensus 158 Wd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~-sgs~Dg~----vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~ 232 (394)
||+.++ +. ..+..|...+.+++|+|||++|+ +++.|+. +||+++++...+..
T Consensus 208 ~d~~tg-~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~--------------------- 264 (415)
T 2hqs_A 208 QTLANG-AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTD--------------------- 264 (415)
T ss_dssp EETTTC-CE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCC---------------------
T ss_pred EECCCC-cE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcC---------------------
Confidence 999887 33 35778899999999999999888 7777765 58998887765543
Q ss_pred CCCCCEEEEEec--CCeEEEEeC-CC--eEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCC---CcEEEEEe
Q 016134 233 GHTRPVTCLAVG--RSRLCSGSM-DN--TIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLD---HTIKVWFA 302 (394)
Q Consensus 233 ~h~~~V~~l~~~--~~~l~sgs~-Dg--~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~D---g~i~vwd~ 302 (394)
|...+.+++|+ ++.|++++. ++ .|.+||+.+++. ..+..+...+.++.|+ +++|++++.+ ..|++||+
T Consensus 265 -~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~ 342 (415)
T 2hqs_A 265 -GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDL 342 (415)
T ss_dssp -CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEET
T ss_pred -CCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEEC
Confidence 44455666665 566776665 44 678889987764 4455677788899998 7888887764 58999999
Q ss_pred CCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC---eEEEEECCCCceeEEEec-CCcEEEEEECCCC
Q 016134 303 TGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN---TVHLYELPSFMERGRIFS-KHEVRVIEIGPDK 373 (394)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg---~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~ 373 (394)
.+++.. .+..+. ... ...|+|+|+ +|++++.++ .|++||+.... ...+.. ...|.+++|+|..
T Consensus 343 ~~~~~~-~l~~~~---~~~--~~~~spdg~-~l~~~s~~~~~~~l~~~d~~g~~-~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 343 ATGGVQ-VLSSTF---LDE--TPSLAPNGT-MVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp TTCCEE-ECCCSS---SCE--EEEECTTSS-EEEEEEEETTEEEEEEEETTSCC-EEECCCSSSEEEEEEECCCC
T ss_pred CCCCEE-EecCCC---CcC--CeEEcCCCC-EEEEEEcCCCccEEEEEECCCCc-EEEeeCCCCCCcCCcccccc
Confidence 877653 333322 222 335799999 677776666 89999997544 444443 6789999999964
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=3.5e-19 Score=165.69 Aligned_cols=268 Identities=12% Similarity=0.170 Sum_probs=172.1
Q ss_pred ccCCCCCcccccccCC-CCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcC--CC-
Q 016134 88 SSGSEDRIPHVRNREN-PGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCG--EG- 163 (394)
Q Consensus 88 ~s~s~d~~~~~w~~~~-~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~--~~- 163 (394)
++.+.|+.+++|+++. +.... . ....+...+..++ ++|++.+++.++.+ ++.|++|++. ++
T Consensus 9 ~~~~~~~~v~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~-~spdg~~l~~~~~~---~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 9 IASPESQQIHVWNLNHEGALTL-T----------QVVDVPGQVQPMV-VSPDKRYLYVGVRP---EFRVLAYRIAPDDGA 73 (343)
T ss_dssp EEEGGGTEEEEEEECTTSCEEE-E----------EEEECSSCCCCEE-ECTTSSEEEEEETT---TTEEEEEEECTTTCC
T ss_pred EeCCCCCeEEEEEECCCCcEEE-e----------eeEecCCCCceEE-ECCCCCEEEEeecC---CCeEEEEEecCCCCc
Confidence 4457799999999963 22110 0 1112334566777 99999988765554 2599999996 43
Q ss_pred ceEEEEecccCCCeEEEEecCCCCEEEEEeC-CCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 164 LTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 164 ~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
.+.+..+..+. .+..++|+|++++|++++. ++. +||+..+....... .. .....+.+
T Consensus 74 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~------------------~~-~~~~~~~~ 133 (343)
T 1ri6_A 74 LTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD------------------VV-EGLDGCHS 133 (343)
T ss_dssp EEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE------------------EE-CCCTTBCC
T ss_pred eeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc------------------cc-cCCCCceE
Confidence 24455555544 8899999999998877765 565 69985332211100 00 12234666
Q ss_pred EEec--CCeEEEEe-CCCeEEEEeCCC-CceeE----EEcC-CCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCC--Cc
Q 016134 241 LAVG--RSRLCSGS-MDNTIRVWELDT-LEPVM----TLND-HTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATG--RG 306 (394)
Q Consensus 241 l~~~--~~~l~sgs-~Dg~V~iwd~~~-~~~~~----~~~~-h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~--~~ 306 (394)
++|+ +++|++++ .++.|++||+.+ ++... .+.. ....+..++|+ +++|++++ .++.|.+||+.. ++
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 7776 55677666 899999999987 55432 2332 33467889998 66665554 789999999954 22
Q ss_pred e--eeEeecccCC--cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC----CceeEEEecCCcEEEEEECCCC-EEEE
Q 016134 307 N--LEAAYTHKED--NGVLALGGLNDPDGKPVLICACNDNTVHLYELPS----FMERGRIFSKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 307 ~--~~~~~~~~~~--~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~----~~~~~~~~~~~~v~~l~~sp~~-~l~t 377 (394)
. .......... .......+.|+|+++.++++...++.|.+||+.. .+.+..+.....+..++|+|++ +|++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 293 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIA 293 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEE
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEE
Confidence 2 1222211111 1112223457999985555677899999999982 2344444444558999999999 6777
Q ss_pred Ee-CCCeEEEEeCC
Q 016134 378 GD-GAGMLGVWKLL 390 (394)
Q Consensus 378 gs-~Dg~I~vWd~~ 390 (394)
++ .++.|.+|+++
T Consensus 294 ~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 294 AGQKSHHISVYEIV 307 (343)
T ss_dssp ECTTTCEEEEEEEE
T ss_pred ecCCCCeEEEEEEc
Confidence 76 68999999665
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=1.3e-18 Score=173.44 Aligned_cols=248 Identities=10% Similarity=0.047 Sum_probs=186.4
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeec--CCCcEEEec
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNI--ESSAEFSLD 210 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~--~~~~~~~~~ 210 (394)
++|.+.++++...++ +|.+||..++ +++.++..+.. +..++|+|++++|++++.|+. +||+ .+++.+...
T Consensus 145 ~~p~~~~~vs~~~d~----~V~v~D~~t~-~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 145 LDLPNLFSVTLRDAG----QIALVDGDSK-KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp CCGGGEEEEEEGGGT----EEEEEETTTC-CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred cCCCCEEEEEEcCCC----eEEEEECCCc-eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence 667777666555444 9999999887 77888874333 899999999999999999988 6999 788776444
Q ss_pred CCCCcEEEEEEcC----C--EEEEEecC-------------------C----------C-CCCEEEEEec---CCeEEEE
Q 016134 211 GPVGEVYSMVVAN----E--MLFAGAQD-------------------G----------H-TRPVTCLAVG---RSRLCSG 251 (394)
Q Consensus 211 ~~~~~v~~l~~~~----~--~l~~~~~~-------------------~----------h-~~~V~~l~~~---~~~l~sg 251 (394)
.....+..++|+| + .++++... . | ...+.++.++ +.++++.
T Consensus 219 ~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 219 KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 4566789999998 7 67776642 1 1 1257778886 3457778
Q ss_pred eCCCeEEEEeCCCCceeE--EEcCCCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCCCceeeEeecccCCc--ceEEEE
Q 016134 252 SMDNTIRVWELDTLEPVM--TLNDHTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATGRGNLEAAYTHKEDN--GVLALG 324 (394)
Q Consensus 252 s~Dg~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~~~~~~~~~~~~~~~--~~~~~~ 324 (394)
..++.|.+||+.+.+.+. .+. +...+..+.|+ +++|++++ .+++|.+||+.+++.+..+.....+. ....+
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~- 376 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF- 376 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-
T ss_pred CCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-
Confidence 889999999998866544 443 56678888888 67666554 58999999999998877766432222 22333
Q ss_pred eeECCCCCcEEEEEe-CCCeEEEEECCC-------CceeEEEec-CCcEEEEEECCCC-EEEEEe-------CCCeEEEE
Q 016134 325 GLNDPDGKPVLICAC-NDNTVHLYELPS-------FMERGRIFS-KHEVRVIEIGPDK-LFFTGD-------GAGMLGVW 387 (394)
Q Consensus 325 ~~~s~~g~~~l~sgs-~dg~I~iwd~~~-------~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs-------~Dg~I~vW 387 (394)
++|++..+++++. .|++|.+||+.+ ++.+..+.. ...+..++++|++ +|++++ .+++|.||
T Consensus 377 --~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~ 454 (543)
T 1nir_A 377 --VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 454 (543)
T ss_dssp --EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEE
T ss_pred --CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEE
Confidence 3777554788876 589999999998 788888876 4567889999999 888876 27799999
Q ss_pred eCCCC
Q 016134 388 KLLAK 392 (394)
Q Consensus 388 d~~~~ 392 (394)
|+.+.
T Consensus 455 d~~~~ 459 (543)
T 1nir_A 455 DLKNL 459 (543)
T ss_dssp ETTCT
T ss_pred ECCCC
Confidence 99865
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=2.1e-19 Score=185.60 Aligned_cols=306 Identities=10% Similarity=-0.025 Sum_probs=201.2
Q ss_pred CCCcccccccccccccCCC-CC-----cccccccCCCCCCCCCCCCCCc------cccc------cCCCCccceeeeccc
Q 016134 74 SPPSYNRLKNNLWVSSGSE-DR-----IPHVRNRENPGYTGPKNSSSAS------STVS------DESGDKSTSKKTTLK 135 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~-d~-----~~~~w~~~~~~~~~~~~s~~~~------~~~~------~~~g~~~~v~~~~~~ 135 (394)
...+|++ ++.++++++. |+ ++++||++++............ +..+ +.......+..++ |
T Consensus 40 ~~~~~Sp--dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~ 116 (741)
T 2ecf_A 40 MKPKVAP--DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ-W 116 (741)
T ss_dssp EEEEECT--TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE-E
T ss_pred CCceEec--CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE-E
Confidence 3456777 8889999888 87 8999999988642111000000 0000 0000002367787 9
Q ss_pred cccccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCC
Q 016134 136 NVCCHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPV 213 (394)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~ 213 (394)
+|++.+++..+. +.|++||+.++. .....+..|...+..++|+|||++|+.++.+.. +||+.+++...+....
T Consensus 117 SpDg~~l~~~~~-----~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 117 SPDAQRLLFPLG-----GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp CTTSSEEEEEET-----TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCC
T ss_pred CCCCCEEEEEeC-----CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCC
Confidence 999999987664 599999997751 034567788899999999999999999986533 6999988776554322
Q ss_pred Cc-----------------EEEEEEcCC--EEEEEecCC-----------------------------------------
Q 016134 214 GE-----------------VYSMVVANE--MLFAGAQDG----------------------------------------- 233 (394)
Q Consensus 214 ~~-----------------v~~l~~~~~--~l~~~~~~~----------------------------------------- 233 (394)
.. +..+.|+|+ .|+.+..+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 21 467899998 555543221
Q ss_pred -------------CCCCEEEEEe-cCCeEEEEeC-----CCeEEEEeCCCCceeEEEcCCCC----CcEEEEEc--CCEE
Q 016134 234 -------------HTRPVTCLAV-GRSRLCSGSM-----DNTIRVWELDTLEPVMTLNDHTD----APMSLLCW--DQFL 288 (394)
Q Consensus 234 -------------h~~~V~~l~~-~~~~l~sgs~-----Dg~V~iwd~~~~~~~~~~~~h~~----~v~~l~~~--~~~l 288 (394)
|...+..++| +++.|++++. +..|++||+.++++...+..+.. .+..+.|+ ++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 2334555666 2456766553 67899999999988777665543 34577887 7788
Q ss_pred EEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC--eEEEEECCC-CceeEEEecCCcEE
Q 016134 289 LSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN--TVHLYELPS-FMERGRIFSKHEVR 365 (394)
Q Consensus 289 ~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg--~I~iwd~~~-~~~~~~~~~~~~v~ 365 (394)
++++.|+.++||.+........+..+... +..+ ..|+|+++.++++++.++ .++||++.. +.....+.....+.
T Consensus 352 ~~~~~~g~~~l~~~~~~~~~~~l~~~~~~--v~~~-~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~ 428 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGKAAALTHGNWS--VDEL-LAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMH 428 (741)
T ss_dssp EEECTTSSCEEEEECSSSCEEESCCSSSC--EEEE-EEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEE
T ss_pred EEecCCCccEEEEEcCCCCeeeeeecceE--EEeE-eEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCce
Confidence 89999998888887632224444433322 2211 136999985556677666 899999864 44455555566789
Q ss_pred EEEECCCC-EEEEE-eCC---CeEEEEeCC
Q 016134 366 VIEIGPDK-LFFTG-DGA---GMLGVWKLL 390 (394)
Q Consensus 366 ~l~~sp~~-~l~tg-s~D---g~I~vWd~~ 390 (394)
.++|+||+ +|+.. +.. ..+.+|+..
T Consensus 429 ~~~~spdg~~l~~~~~~~~~p~~~~l~~~~ 458 (741)
T 2ecf_A 429 SASFARNASVYVDSWSNNSTPPQIELFRAN 458 (741)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEEETT
T ss_pred EEEECCCCCEEEEEecCCCCCCeEEEEEcC
Confidence 99999999 55444 333 467888764
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=2.1e-18 Score=160.29 Aligned_cols=263 Identities=10% Similarity=0.061 Sum_probs=176.0
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCce
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLT 165 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~ 165 (394)
.+++.+.++++++||++++...... ..+ .... .++ ++|++.++..... .++.|.+||..++..
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~-----------~~~-~~~~-~~~-~s~dg~~l~~~~~---~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQI-----------TLG-YDFV-DTA-ITSDCSNVVVTSD---FCQTLVQIETQLEPP 74 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEE-----------ECC-CCEE-EEE-ECSSSCEEEEEES---TTCEEEEEECSSSSC
T ss_pred EEEEecCCCeEEEEeCcccceeeeE-----------Ecc-CCcc-eEE-EcCCCCEEEEEeC---CCCeEEEEECCCCce
Confidence 3567788999999999988764311 112 2234 677 9999987664443 234999999988743
Q ss_pred EEEEecccCCCeEEEEecCCCCEEEEEeCCC---c--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 166 MLAKLEGHEKAVSGIALPLRSDKLFSGSRDG---T--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 166 ~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg---~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
....+..+..++.+++|+|++++|+++..++ . +||+++++.+..... .....+
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~----------------------~~~~~~ 132 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI----------------------PYDAVG 132 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC----------------------CTTEEE
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC----------------------CCCccc
Confidence 3677777777777799999999999555552 4 699998877643221 223456
Q ss_pred EEec--CCe-EEEEeCCCe-EEEEeCCCCcee----EEEcCCCCCcEEEEEc--CCEEE-EEeCCCcEEEEEeCCCce--
Q 016134 241 LAVG--RSR-LCSGSMDNT-IRVWELDTLEPV----MTLNDHTDAPMSLLCW--DQFLL-SCSLDHTIKVWFATGRGN-- 307 (394)
Q Consensus 241 l~~~--~~~-l~sgs~Dg~-V~iwd~~~~~~~----~~~~~h~~~v~~l~~~--~~~l~-s~s~Dg~i~vwd~~~~~~-- 307 (394)
++|+ +++ +++...++. |.+|++.....+ .........+..+.|+ +++|+ ++..++.|.+||+.+++.
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~ 212 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT 212 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc
Confidence 6776 444 444455678 999998754332 1122334567889998 66554 445689999999988777
Q ss_pred -eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce--eEEEecC--------CcEEEEEECCCC-EE
Q 016134 308 -LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME--RGRIFSK--------HEVRVIEIGPDK-LF 375 (394)
Q Consensus 308 -~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~~--------~~v~~l~~sp~~-~l 375 (394)
+..+.... .... +.|+|+|+.++++...++.|.+||+.+++. +..+... .....++|+|++ +|
T Consensus 213 ~~~~~~~~~-~~~~----~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 287 (331)
T 3u4y_A 213 LLNAVGTNN-LPGT----IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKL 287 (331)
T ss_dssp EEEEEECSS-CCCC----EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEE
T ss_pred eeeeccCCC-CCce----EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEE
Confidence 55444321 1222 236999995555555678999999998876 3333221 123568999999 55
Q ss_pred E-EEeCCCeEEEEeCCCC
Q 016134 376 F-TGDGAGMLGVWKLLAK 392 (394)
Q Consensus 376 ~-tgs~Dg~I~vWd~~~~ 392 (394)
+ ++..++.|.+||+..+
T Consensus 288 ~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 288 FISANISRELKVFTISGK 305 (331)
T ss_dssp EEEETTTTEEEEEETTSC
T ss_pred EEecCCCCcEEEEEecCC
Confidence 4 5556779999999764
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=7.8e-19 Score=180.77 Aligned_cols=301 Identities=9% Similarity=-0.061 Sum_probs=195.4
Q ss_pred CCCCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCcc---ceeeeccccccccccCCCeec
Q 016134 72 KKSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKS---TSKKTTLKNVCCHWLLGNCVR 148 (394)
Q Consensus 72 ~~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~---~v~~~~~~~~~~~~~~~~~~~ 148 (394)
.....+|++ ++..+++ +.|+++++||++++.... ...++.. .+..++ ++|++.+++.+..+
T Consensus 18 ~~~~~~~sp--dg~~~~~-~~dg~i~~~d~~~g~~~~------------~~~~~~~~~~~v~~~~-~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 18 HDPEAKWIS--DTEFIYR-EQKGTVRLWNVETNTSTV------------LIEGKKIESLRAIRYE-ISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCBSS--SSCBCCC-CSSSCEEEBCGGGCCCEE------------EECTTTTTTTTCSEEE-ECTTSSEEEEEESC
T ss_pred cccccEEcC--CCcEEEE-eCCCCEEEEECCCCcEEE------------EeccccccccccceEE-ECCCCCEEEEEecC
Confidence 346678888 7776655 789999999999887532 1122222 478888 99999999877655
Q ss_pred CCC-----CCeEEEEEcCCCce-EEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecC-CCCc-----
Q 016134 149 GDE-----CRFLHSWFCGEGLT-MLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDG-PVGE----- 215 (394)
Q Consensus 149 g~~-----~~~i~iWd~~~~~~-~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~-~~~~----- 215 (394)
... ++.|++||+.++.. .+....+|...+..++|+|||++|+.++.... +||+.+++...+.. +...
T Consensus 82 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp CCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEE
T ss_pred ccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECc
Confidence 432 47999999987632 22333456666999999999999999987433 69988887664432 2222
Q ss_pred -------------EEEEEEcCC--EEEEEecCCC--------------CCCEEEEEec--CCeEEEEeCCCeEEEEeCCC
Q 016134 216 -------------VYSMVVANE--MLFAGAQDGH--------------TRPVTCLAVG--RSRLCSGSMDNTIRVWELDT 264 (394)
Q Consensus 216 -------------v~~l~~~~~--~l~~~~~~~h--------------~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~ 264 (394)
+..++|+|+ .|+.+..+.. ...+..+.|. +.. ..+..|++||+.+
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~ 237 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE----NPSISLHVIGLNG 237 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC----CCEEEEEEEESSS
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC----CCeeEEEEEECCC
Confidence 368899988 6666665432 2234444443 211 2234899999998
Q ss_pred CceeEEEcCC------CCCcEEEEEc--CCEEEEEeC----CCcEEEEEeCCCceeeEeecccC-CcceEEEEeeECCCC
Q 016134 265 LEPVMTLNDH------TDAPMSLLCW--DQFLLSCSL----DHTIKVWFATGRGNLEAAYTHKE-DNGVLALGGLNDPDG 331 (394)
Q Consensus 265 ~~~~~~~~~h------~~~v~~l~~~--~~~l~s~s~----Dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g 331 (394)
++....+..+ ...+..+.|+ +++|++.+. +..|++||+.+++....+..+.. ..........|+|||
T Consensus 238 ~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg 317 (723)
T 1xfd_A 238 PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDG 317 (723)
T ss_dssp SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTS
T ss_pred CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCC
Confidence 8876677654 5678889998 667766543 35799999988776555433221 111000123479999
Q ss_pred CcEEEE-EeCCC------eEEEEE-CCCCce--eEEEec-CCcEEE-EEECCCC-EEEEEe-CC--CeEEEEeCCCC
Q 016134 332 KPVLIC-ACNDN------TVHLYE-LPSFME--RGRIFS-KHEVRV-IEIGPDK-LFFTGD-GA--GMLGVWKLLAK 392 (394)
Q Consensus 332 ~~~l~s-gs~dg------~I~iwd-~~~~~~--~~~~~~-~~~v~~-l~~sp~~-~l~tgs-~D--g~I~vWd~~~~ 392 (394)
+.+++. +..++ .|.+|| ...+.. ...+.. ...+.. ++|+||+ .|+..+ .+ +.++||+++..
T Consensus 318 ~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 318 RKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp CSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred CeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 955554 55677 566777 344331 333332 334554 6999999 665544 44 78999998653
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=3.8e-19 Score=161.33 Aligned_cols=247 Identities=10% Similarity=0.010 Sum_probs=171.1
Q ss_pred ccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC-CceE
Q 016134 88 SSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE-GLTM 166 (394)
Q Consensus 88 ~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~-~~~~ 166 (394)
.+++.|+++++||++++.... ..++...+.++. ++|++.+++.+. ++.|++||+.+ + +.
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~~-------------~~~~~~~v~~~~-~spdg~~l~~~~-----~~~i~~~d~~~~~-~~ 75 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMRV-------------VWQTPELFEAPN-WSPDGKYLLLNS-----EGLLYRLSLAGDP-SP 75 (297)
T ss_dssp --CCCCEEEEEEETTTTEEEE-------------EEEESSCCEEEE-ECTTSSEEEEEE-----TTEEEEEESSSCC-SC
T ss_pred CCCCcceeEEEEeCCCCceee-------------eccCCcceEeeE-ECCCCCEEEEEc-----CCeEEEEeCCCCC-Cc
Confidence 346779999999998776431 233456788888 999999988753 34899999988 6 55
Q ss_pred EEEeccc-CCCeEEEEecCCCCEEEEEeCC--Cc--eeec--CCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEE
Q 016134 167 LAKLEGH-EKAVSGIALPLRSDKLFSGSRD--GT--AWNI--ESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVT 239 (394)
Q Consensus 167 ~~~l~~h-~~~V~~l~~s~~~~~l~sgs~D--g~--vWd~--~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~ 239 (394)
...+.+| ...|.+++|+|++++|++++.+ +. ||.+ .++....+. +...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------------------~~~~~~ 132 (297)
T 2ojh_A 76 EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT-----------------------KNLPSY 132 (297)
T ss_dssp EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC-----------------------SSSSEE
T ss_pred eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee-----------------------cCCCcc
Confidence 5566566 4789999999999999999944 22 6654 444433322 122366
Q ss_pred EEEec--CCeEE-EEeCCCeEEEEeCCC-CceeEEEcCCCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeC-CCceeeEe
Q 016134 240 CLAVG--RSRLC-SGSMDNTIRVWELDT-LEPVMTLNDHTDAPMSLLCW--DQFLLSCS-LDHTIKVWFAT-GRGNLEAA 311 (394)
Q Consensus 240 ~l~~~--~~~l~-sgs~Dg~V~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~-~~~~~~~~ 311 (394)
.++|+ ++.|+ ++..|+.++||+++. ......+..+...+.++.|+ +++|+.++ .++.+++|++. .......+
T Consensus 133 ~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred ceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 66775 45555 788899999998532 23445667788889999998 67777665 58999999986 44444444
Q ss_pred ecccCCcceEEEEeeECCCCCcEEEEEeCC-----------CeEEEEECCCCceeEEE---ecCCcEEEEEECCCC-EEE
Q 016134 312 YTHKEDNGVLALGGLNDPDGKPVLICACND-----------NTVHLYELPSFMERGRI---FSKHEVRVIEIGPDK-LFF 376 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----------g~I~iwd~~~~~~~~~~---~~~~~v~~l~~sp~~-~l~ 376 (394)
..+. .......|+|+++ +|++++.+ +.|++||+.+++..... .+...+..++|+|++ .|+
T Consensus 213 ~~~~----~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 287 (297)
T 2ojh_A 213 TDSA----YGDWFPHPSPSGD-KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFA 287 (297)
T ss_dssp CCCS----EEEEEEEECTTSS-EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEE
T ss_pred ecCC----cccCCeEECCCCC-EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEE
Confidence 4332 2223345799999 66666554 57999999987653332 235678999999999 777
Q ss_pred EEeCCC
Q 016134 377 TGDGAG 382 (394)
Q Consensus 377 tgs~Dg 382 (394)
+++.|.
T Consensus 288 ~~~~~~ 293 (297)
T 2ojh_A 288 YVRYFP 293 (297)
T ss_dssp EEEECC
T ss_pred EEEecc
Confidence 666543
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=1.5e-18 Score=160.96 Aligned_cols=260 Identities=12% Similarity=0.022 Sum_probs=175.8
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCcc-ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKS-TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL 164 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~ 164 (394)
.+++++.|.++++||++++..... ...++.. .+..+. ++|++.++.... ..++.|.+||+.++
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~-----------~~~~~~~~~~~~~~-~s~dg~~l~v~~---~~~~~v~~~d~~~~- 66 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKV-----------ITIADAGPTPMVPM-VAPGGRIAYATV---NKSESLVKIDLVTG- 66 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEE-----------EECTTCTTCCCCEE-ECTTSSEEEEEE---TTTTEEEEEETTTC-
T ss_pred EEEEcCCCCeEEEEECCCCcEEEE-----------EEcCCCCCCccceE-EcCCCCEEEEEe---CCCCeEEEEECCCC-
Confidence 567888899999999998765321 1222211 245666 899887654332 23458999999887
Q ss_pred eEEEEec-cc----CCCeEEEEecCCCCEEEEEe------------CCCc--eeecCCCcEEEecCCCCcEEEEEEcCCE
Q 016134 165 TMLAKLE-GH----EKAVSGIALPLRSDKLFSGS------------RDGT--AWNIESSAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 165 ~~~~~l~-~h----~~~V~~l~~s~~~~~l~sgs------------~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
+.+..+. ++ ...+..++|+|++++|+++. .++. +||+++++.......
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------------- 133 (337)
T 1pby_B 67 ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------------- 133 (337)
T ss_dssp CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-------------
T ss_pred CeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-------------
Confidence 5555444 22 23678899999999999886 4566 699988776532211
Q ss_pred EEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC--CCcEEEEEcCCEEEEEeC-CC-----
Q 016134 226 LFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT--DAPMSLLCWDQFLLSCSL-DH----- 295 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~--~~v~~l~~~~~~l~s~s~-Dg----- 295 (394)
...+.+++|+ +++|+++ ++.|.+||+++++.+..+..+. .++ .+...+..|+..+. ++
T Consensus 134 ---------~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~s~dg~~l~~~~~~~~~~~~~ 201 (337)
T 1pby_B 134 ---------PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAET-YAQPDVLAVWNQHESSGVMATP 201 (337)
T ss_dssp ---------CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTT-BCCCBCCCCCCCCTTTTEEEEE
T ss_pred ---------CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCc-eeCCCccEEeeeccCCCceeee
Confidence 1234455665 5566666 6889999999999888776543 322 22222444433332 22
Q ss_pred ------------------cEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEE
Q 016134 296 ------------------TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGR 357 (394)
Q Consensus 296 ------------------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~ 357 (394)
.|.+||+.+++.. .+.......... .+.++|+++ +|+++ ++.|.+||+.+++.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~--~~~~s~dg~-~l~~~--~~~v~~~d~~~~~~~~~ 275 (337)
T 1pby_B 202 FYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYF--STAVNPAKT-RAFGA--YNVLESFDLEKNASIKR 275 (337)
T ss_dssp EEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEE--EEEECTTSS-EEEEE--ESEEEEEETTTTEEEEE
T ss_pred eeccccccccccccccccceEEEeCCCCCce-EeecCCCCCcee--eEEECCCCC-EEEEe--CCeEEEEECCCCcCcce
Confidence 4789999887664 322222222222 345799999 66666 79999999999988888
Q ss_pred EecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 358 IFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 358 ~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+.....+.+++|+|++ +|++++.++.|.+||+.+.
T Consensus 276 ~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 276 VPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred ecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 7777788999999999 8888899999999999764
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=1.1e-16 Score=149.64 Aligned_cols=248 Identities=8% Similarity=-0.014 Sum_probs=172.8
Q ss_pred ceeeeccccccccccCCCeecCC---CCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEe-CCCc--eeec
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGD---ECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGT--AWNI 201 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~---~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~--vWd~ 201 (394)
.+..++ ++|++.++...+..+. .++.|.+||..++ +.+..+.. ...+..++|+|++++++.++ .++. +||.
T Consensus 42 ~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 42 GAYEMA-YSQQENALWLATSQSRKLDKGGVVYRLDPVTL-EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SEEEEE-EETTTTEEEEEECCCTTTEESEEEEEECTTTC-CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccceE-ECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-eEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 345566 8898888766554432 3679999999887 55666553 34578899999999666554 4566 5999
Q ss_pred CCCcEEEe-cCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEe--CCCeEEEEeCCCCceeEEEcCCCC
Q 016134 202 ESSAEFSL-DGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGS--MDNTIRVWELDTLEPVMTLNDHTD 276 (394)
Q Consensus 202 ~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs--~Dg~V~iwd~~~~~~~~~~~~h~~ 276 (394)
++++.... ..+...- ........+.+++|+ ++++++++ .++.|.+||+++++.+..+..+..
T Consensus 119 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 185 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKR-------------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK 185 (353)
T ss_dssp TTCCEEEEEESCCCCC-------------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT
T ss_pred CCCeeEEEEecCCCcc-------------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC
Confidence 88887532 1111000 000011125667775 56666555 488999999999999988876666
Q ss_pred CcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce
Q 016134 277 APMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME 354 (394)
Q Consensus 277 ~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~ 354 (394)
.+..+.++ +++|++++.++.|.+||+.+++....+.............+.++|+++.++++...++.|.+||+.+++.
T Consensus 186 ~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 186 MSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred ccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 67888887 7889999999999999999887776665422211222223457999995555555669999999999988
Q ss_pred eEEEecCCcEEEEEECCCC-EE-EEEeCCCeEEEEeCCCC
Q 016134 355 RGRIFSKHEVRVIEIGPDK-LF-FTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 355 ~~~~~~~~~v~~l~~sp~~-~l-~tgs~Dg~I~vWd~~~~ 392 (394)
+..+..... ..++|+|++ ++ ++...++.|.+||+.+.
T Consensus 266 ~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 266 LAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 877765443 679999998 44 45557999999998754
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.79 E-value=5.6e-17 Score=151.61 Aligned_cols=244 Identities=8% Similarity=-0.019 Sum_probs=174.0
Q ss_pred CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecc
Q 016134 93 DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEG 172 (394)
Q Consensus 93 d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~ 172 (394)
+..+.+||.+++...... ..+ ..+..+. +++++.++.... ..++.|.+||..++ +.+..+..
T Consensus 68 ~~~v~~~d~~~~~~~~~~-----------~~~--~~~~~~~-~s~dg~~l~v~~---~~~~~v~~~d~~~~-~~~~~~~~ 129 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAI-----------HND--LKPFGAT-INNTTQTLWFGN---TVNSAVTAIDAKTG-EVKGRLVL 129 (353)
T ss_dssp SEEEEEECTTTCCEEEEE-----------EES--SCCCSEE-EETTTTEEEEEE---TTTTEEEEEETTTC-CEEEEEES
T ss_pred CccEEEEcCCCCeEEEEE-----------ecC--CCcceEE-ECCCCCEEEEEe---cCCCEEEEEeCCCC-eeEEEEec
Confidence 568999999987753211 111 1244555 888887554322 23449999999887 56666665
Q ss_pred cCCC---------eEEEEecCCCCEEEEEe--CCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEE
Q 016134 173 HEKA---------VSGIALPLRSDKLFSGS--RDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVT 239 (394)
Q Consensus 173 h~~~---------V~~l~~s~~~~~l~sgs--~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~ 239 (394)
+... +.+++|+|++++|+.++ .++. +||.++++...... .+...+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~---------------------~~~~~~~ 188 (353)
T 3vgz_A 130 DDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ---------------------NTGKMST 188 (353)
T ss_dssp CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC---------------------CCCTTCC
T ss_pred CCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec---------------------CCCCccc
Confidence 4432 78999999999888776 3555 59998887664321 1222344
Q ss_pred EEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcC----CCCCcEEEEEc--CCEEEEEeC-CCcEEEEEeCCCceeeE
Q 016134 240 CLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLND----HTDAPMSLLCW--DQFLLSCSL-DHTIKVWFATGRGNLEA 310 (394)
Q Consensus 240 ~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~----h~~~v~~l~~~--~~~l~s~s~-Dg~i~vwd~~~~~~~~~ 310 (394)
+++|+ +++|++++.++.|.+||+.+++.+..+.. +...+..++++ +++|++++. ++.|.+||+.+++.+..
T Consensus 189 ~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 55664 67888888999999999999998887764 45567788888 676666554 59999999998887766
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCC
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGA 381 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~D 381 (394)
+..... . .+.|+|+++.++++...++.|.+||+.+++.+..+.....+.+++|+|++ +|+.+..+
T Consensus 269 ~~~~~~--~----~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 269 VAAPES--L----AVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECSSC--C----CEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEcCCC--c----eEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 654321 2 23468999856666667999999999999988888777789999999999 55555544
No 139
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=6.6e-18 Score=163.87 Aligned_cols=218 Identities=17% Similarity=0.133 Sum_probs=149.2
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEe-cCCCCcEEEEEEcCCEEEEEec
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSL-DGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
.|++|+.... .+...++.|++++++.+|++++.|+. ||+......... ..+...+ ..+.+...
T Consensus 24 ~vri~~~~~~--------~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~----- 88 (434)
T 2oit_A 24 KVRIFDSPEE--------LPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKI--VDKVQGLL----- 88 (434)
T ss_dssp EEECSCCCSS--------CCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCE--EECCCCEE-----
T ss_pred eEEecCCccc--------cCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccc--cccCcccc-----
Confidence 6777765321 23456899999999999999998886 455432111000 0000000 01111100
Q ss_pred CCCCCCEEEEEec--CCeEE----EEeCCCeEEEEeCCCC--------ce---eEEEcCCCCCcEEEEEc---CCEEEEE
Q 016134 232 DGHTRPVTCLAVG--RSRLC----SGSMDNTIRVWELDTL--------EP---VMTLNDHTDAPMSLLCW---DQFLLSC 291 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~~~l~----sgs~Dg~V~iwd~~~~--------~~---~~~~~~h~~~v~~l~~~---~~~l~s~ 291 (394)
-.+...|.+++|+ +++|+ +++.|++|+|||+++. ++ +..+.+|...|.+++|+ +.+|+++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 0466789999997 67888 7889999999998654 22 45556799999999998 5689999
Q ss_pred eCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec----C----Cc
Q 016134 292 SLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS----K----HE 363 (394)
Q Consensus 292 s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~----~~ 363 (394)
+.|++|++||++++..+.....|... +. +++|+|+|+ +|++|+.|++|++||++ ++....+.. . ..
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~--v~--~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~ 242 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVA--VT--SVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVR 242 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGC--EE--EEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCc--ee--EEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCcee
Confidence 99999999999987655444444432 33 335799998 89999999999999998 555444432 1 27
Q ss_pred EEEEEECCCC-EE-EEEeCCCe------EEEEeCCCC
Q 016134 364 VRVIEIGPDK-LF-FTGDGAGM------LGVWKLLAK 392 (394)
Q Consensus 364 v~~l~~sp~~-~l-~tgs~Dg~------I~vWd~~~~ 392 (394)
|.+++|++++ ++ ++...||. +++|++...
T Consensus 243 v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 243 VLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999999998 33 34445543 899998764
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.78 E-value=1.4e-17 Score=171.08 Aligned_cols=270 Identities=10% Similarity=-0.007 Sum_probs=176.5
Q ss_pred CcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeE
Q 016134 76 PSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i 155 (394)
.+|++ + ..++. +.|.++++||++++.... ...+...+..+. |+|++.+++.. .+ +.|
T Consensus 87 ~~~sp--d-~~~~~-~~~~~i~~~d~~~~~~~~-------------l~~~~~~~~~~~-~SpdG~~la~~-~~----~~i 143 (706)
T 2z3z_A 87 TLDAG--R-GLVVL-FTQGGLVGFDMLARKVTY-------------LFDTNEETASLD-FSPVGDRVAYV-RN----HNL 143 (706)
T ss_dssp EEETT--T-TEEEE-EETTEEEEEETTTTEEEE-------------EECCTTCCTTCE-ECTTSSEEEEE-ET----TEE
T ss_pred EEECC--C-CeEEE-EECCEEEEEECCCCceEE-------------ccCCcccccCCc-CCCCCCEEEEE-EC----CeE
Confidence 34454 5 55554 457999999998876431 111223456667 99999998873 33 489
Q ss_pred EEEEcCC-----CceEEEEecccCCC--------------eEEEEecCCCCEEEEEeCC---------------------
Q 016134 156 HSWFCGE-----GLTMLAKLEGHEKA--------------VSGIALPLRSDKLFSGSRD--------------------- 195 (394)
Q Consensus 156 ~iWd~~~-----~~~~~~~l~~h~~~--------------V~~l~~s~~~~~l~sgs~D--------------------- 195 (394)
++||+.+ + +..+....+... +.+++|+|||++|++++.|
T Consensus 144 ~v~~~~~~~~~~g-~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 144 YIARGGKLGEGMS-RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEECBCTTSCCC-CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEecCcccccCC-CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 9999987 6 444444444443 4899999999999999833
Q ss_pred ------------Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCC----
Q 016134 196 ------------GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDN---- 255 (394)
Q Consensus 196 ------------g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg---- 255 (394)
.. +||+++++...+.. ...|...+.+++|+ ++.|++++.|+
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 283 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQT-------------------GEPKEKFLTNLSWSPDENILYVAEVNRAQNE 283 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCC-------------------CSCTTCEEEEEEECTTSSEEEEEEECTTSCE
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeecc-------------------CCCCceeEeeEEEECCCCEEEEEEeCCCCCe
Confidence 11 47776665443221 11455667778886 56788877765
Q ss_pred -eEEEEeCCCCceeEEEc--CCCC---CcEEEEEc----CCEEEEEeCCCcEEEEEeC-CCceeeEeecccCCcceEEEE
Q 016134 256 -TIRVWELDTLEPVMTLN--DHTD---APMSLLCW----DQFLLSCSLDHTIKVWFAT-GRGNLEAAYTHKEDNGVLALG 324 (394)
Q Consensus 256 -~V~iwd~~~~~~~~~~~--~h~~---~v~~l~~~----~~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~ 324 (394)
.|++||+.+++....+. .+.. .+..+.|+ +++|++++.|+.++||++. +++.+..+..+... +.. .
T Consensus 284 ~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~--v~~-~ 360 (706)
T 2z3z_A 284 CKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE--VTN-F 360 (706)
T ss_dssp EEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC--EEE-E
T ss_pred eEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE--EEe-e
Confidence 99999999984443332 1222 23456664 5688888899999999886 45555555433222 221 1
Q ss_pred eeECCCCCcEEEEEeCCC----eEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEE-eCC---CeEEEEeCCCC
Q 016134 325 GLNDPDGKPVLICACNDN----TVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTG-DGA---GMLGVWKLLAK 392 (394)
Q Consensus 325 ~~~s~~g~~~l~sgs~dg----~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tg-s~D---g~I~vWd~~~~ 392 (394)
..|+|+++.+++++..++ .|..||+.+++ ...+.+...+..++|+||+ +|+.. +.+ +.|.+||+.+.
T Consensus 361 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 361 AGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred eEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 347999985556666655 67777877765 3444456679999999999 55554 333 56999998754
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.77 E-value=1.1e-16 Score=148.49 Aligned_cols=214 Identities=9% Similarity=0.023 Sum_probs=151.2
Q ss_pred CCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC-CCc--eeecCCCcE-EE-ecCCCCcEEEEEEcCCEE
Q 016134 152 CRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGT--AWNIESSAE-FS-LDGPVGEVYSMVVANEML 226 (394)
Q Consensus 152 ~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~--vWd~~~~~~-~~-~~~~~~~v~~l~~~~~~l 226 (394)
++.|++||..++ +.+..+..+...+ .++|+|++++|++++. ++. +||+++++. .. +.
T Consensus 19 ~~~v~~~d~~~~-~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---------------- 80 (331)
T 3u4y_A 19 LRRISFFSTDTL-EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ---------------- 80 (331)
T ss_dssp GTEEEEEETTTC-CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE----------------
T ss_pred CCeEEEEeCccc-ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc----------------
Confidence 349999999887 6666666677777 9999999997777766 666 588888775 22 11
Q ss_pred EEEecCCCCCCEEEEEec--CCeEEEEeCCC---eEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCc-E
Q 016134 227 FAGAQDGHTRPVTCLAVG--RSRLCSGSMDN---TIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHT-I 297 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg---~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~-i 297 (394)
.+.....+++|+ +++|+++..++ .|.+||+++++.+..+..+ ..+..++|+ ++ ++++...++. |
T Consensus 81 ------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 81 ------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTV 153 (331)
T ss_dssp ------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEE
T ss_pred ------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceE
Confidence 122233335665 56777555443 8999999999988887754 456899998 55 4555566688 9
Q ss_pred EEEEeCCCceeeEeec--ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce---eEEEecCCcEEEEEECCC
Q 016134 298 KVWFATGRGNLEAAYT--HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME---RGRIFSKHEVRVIEIGPD 372 (394)
Q Consensus 298 ~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~---~~~~~~~~~v~~l~~sp~ 372 (394)
.+|++.....+..... ....... ..+.|+|+|+.+++++..++.|++||+.+++. +..+.....+..++|+|+
T Consensus 154 ~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd 231 (331)
T 3u4y_A 154 RRFKIDADGVLFDTGQEFISGGTRP--FNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD 231 (331)
T ss_dssp EEEEECTTCCEEEEEEEEECSSSSE--EEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT
T ss_pred EEEEECCCCcEeecCCccccCCCCc--cceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCC
Confidence 9999986544322211 1111222 33457999985666677789999999999887 777777777899999999
Q ss_pred C-EEEEE-eCCCeEEEEeCCCC
Q 016134 373 K-LFFTG-DGAGMLGVWKLLAK 392 (394)
Q Consensus 373 ~-~l~tg-s~Dg~I~vWd~~~~ 392 (394)
+ +|+.+ ..++.|.+||+.+.
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTT
T ss_pred CCEEEEEEcCCCEEEEEECCCC
Confidence 9 55544 46788999998753
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=6.4e-17 Score=166.99 Aligned_cols=259 Identities=11% Similarity=-0.027 Sum_probs=183.0
Q ss_pred ceeeeccccccccccCCCee-cC-CCCCeEEEEEcCCCceEEEEecccCC------------------------CeEEEE
Q 016134 128 TSKKTTLKNVCCHWLLGNCV-RG-DECRFLHSWFCGEGLTMLAKLEGHEK------------------------AVSGIA 181 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~-~g-~~~~~i~iWd~~~~~~~~~~l~~h~~------------------------~V~~l~ 181 (394)
.+..++ |+|++.+++..+. ++ .....|++||+.++ +....+..|.. .|.+++
T Consensus 38 ~~~~~~-~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 38 TLMKPK-VAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCEEEE-ECTTSSEEEEEECCSSCTTEEEEEEEETTTC-CEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCce-EecCCCEEEEEeccCCCCcccEEEEEECCCC-ceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567777 9999999987765 43 12238999999887 55555555443 388999
Q ss_pred ecCCCCEEEEEeCCCc--eeecCCC---cEEEecCCCCcEEEEEEcCC--EEEEEecC-----------------CCCCC
Q 016134 182 LPLRSDKLFSGSRDGT--AWNIESS---AEFSLDGPVGEVYSMVVANE--MLFAGAQD-----------------GHTRP 237 (394)
Q Consensus 182 ~s~~~~~l~sgs~Dg~--vWd~~~~---~~~~~~~~~~~v~~l~~~~~--~l~~~~~~-----------------~h~~~ 237 (394)
|+|||++|++++. +. +||+.++ +...+..+...+..++|+|+ .++.+..+ .+...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 9999999999987 55 6999988 66677777888999999998 56555433 12221
Q ss_pred ----------------EEEEEec--CCeEEEEeCCC---------------------------------eEEEEeCCC-C
Q 016134 238 ----------------VTCLAVG--RSRLCSGSMDN---------------------------------TIRVWELDT-L 265 (394)
Q Consensus 238 ----------------V~~l~~~--~~~l~sgs~Dg---------------------------------~V~iwd~~~-~ 265 (394)
+..+.|+ +++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 3668887 67888888766 899999988 7
Q ss_pred ceeEEEc--CCCCCcEEEEEc-CCEEEEEeC-----CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEE
Q 016134 266 EPVMTLN--DHTDAPMSLLCW-DQFLLSCSL-----DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLIC 337 (394)
Q Consensus 266 ~~~~~~~--~h~~~v~~l~~~-~~~l~s~s~-----Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~s 337 (394)
+...... .|...+..+.|. +++|++.+. +..|++||+.+++....+..+............|+|+|+ ++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~ 353 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWS 353 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEE
T ss_pred ceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEE
Confidence 7655433 366677777773 677776653 568999999988766555443321000001234699999 8999
Q ss_pred EeCCCeEEEEECC-CCceeEEEec-CCcEEEE-EECCCC-EE-EEEeCCC--eEEEEeCCC
Q 016134 338 ACNDNTVHLYELP-SFMERGRIFS-KHEVRVI-EIGPDK-LF-FTGDGAG--MLGVWKLLA 391 (394)
Q Consensus 338 gs~dg~I~iwd~~-~~~~~~~~~~-~~~v~~l-~~sp~~-~l-~tgs~Dg--~I~vWd~~~ 391 (394)
++.|+.++||.+. ++. ...+.. ...|..+ .|+|++ .| ++++.++ .++||++..
T Consensus 354 ~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 354 SERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp ECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred ecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 9999988888775 333 444433 4567777 599999 44 5566666 899999764
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=1e-16 Score=145.25 Aligned_cols=215 Identities=7% Similarity=-0.060 Sum_probs=145.5
Q ss_pred CCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCC-CcEEEecCCCCcEEEEEEcCCE
Q 016134 149 GDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 149 g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~-~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
++.++.|++||+.++ +.. .+..|...|.+++|+|++++|++++ ++. +||+++ ++...+...
T Consensus 18 ~~~~~~i~~~d~~~~-~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~------------- 81 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTR-KMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG------------- 81 (297)
T ss_dssp CCCCEEEEEEETTTT-EEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-------------
T ss_pred CCcceeEEEEeCCCC-cee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-------------
Confidence 456779999999876 433 5667899999999999999999987 455 699988 766543211
Q ss_pred EEEEecCCCCCCEEEEEec--CCeEEEEe--CCCeEEE--EeCCCCceeEEEcCCCCCcEEEEEc--CCEEE-EEeCCCc
Q 016134 226 LFAGAQDGHTRPVTCLAVG--RSRLCSGS--MDNTIRV--WELDTLEPVMTLNDHTDAPMSLLCW--DQFLL-SCSLDHT 296 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~--~~~l~sgs--~Dg~V~i--wd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~Dg~ 296 (394)
.+...+.+++|+ +++|++++ .++.++| ||+.+++ ...+..+ ..+..+.|+ +++|+ ++..|+.
T Consensus 82 -------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~ 152 (297)
T 2ojh_A 82 -------FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQV 152 (297)
T ss_dssp -------TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTE
T ss_pred -------cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCc
Confidence 123455666775 56787777 3344444 5555544 4445444 348888888 66666 7888999
Q ss_pred EEEEEeCCC-ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC-CCceeEEEec-CCcEEEEEECCCC
Q 016134 297 IKVWFATGR-GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP-SFMERGRIFS-KHEVRVIEIGPDK 373 (394)
Q Consensus 297 i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~-~~~v~~l~~sp~~ 373 (394)
++||++... .....+..+.. ... .+.|+|+++.+++++..++.++||++. .......+.. ...+..++|+|++
T Consensus 153 ~~l~~~~~~~~~~~~~~~~~~--~~~--~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 228 (297)
T 2ojh_A 153 FDIYSMDIDSGVETRLTHGEG--RND--GPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSG 228 (297)
T ss_dssp EEEEEEETTTCCEEECCCSSS--CEE--EEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTS
T ss_pred eEEEEEECCCCcceEcccCCC--ccc--cceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCC
Confidence 999997532 23333333322 222 345799999444445568999999886 3444444433 4568999999999
Q ss_pred -EEEEEeCC-----------CeEEEEeCCCC
Q 016134 374 -LFFTGDGA-----------GMLGVWKLLAK 392 (394)
Q Consensus 374 -~l~tgs~D-----------g~I~vWd~~~~ 392 (394)
+|++++.+ +.|.+||+.+.
T Consensus 229 ~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 229 DKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp SEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 77777765 56999998764
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.76 E-value=4e-16 Score=146.06 Aligned_cols=277 Identities=10% Similarity=0.016 Sum_probs=169.2
Q ss_pred CCCCcccccccCC--CCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCc-eEE
Q 016134 91 SEDRIPHVRNREN--PGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGL-TML 167 (394)
Q Consensus 91 s~d~~~~~w~~~~--~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~ 167 (394)
+.++.+.+|.++. +.+.... ...+......++ ++|++. +...... +.++.|++|++.++. +.+
T Consensus 13 ~~~~~i~v~~~d~~tg~~~~~~-----------~~~~~~~p~~~a-~spdg~-l~~~~~~-~~~~~v~~~~~~~g~~~~~ 78 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTLTNDG-----------LLAATQNPTYLA-LSAKDC-LYSVDKE-DDEGGIAAWQIDGQTAHKL 78 (347)
T ss_dssp SSCCEEEEEEEETTTTEEEEEE-----------EEEECSCCCCEE-ECTTCE-EEEEEEE-TTEEEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEEEcCCCCeEEEee-----------eeeccCCcceEE-EccCCe-EEEEEec-CCCceEEEEEecCCcEEEe
Confidence 4467788887764 3321100 011123445566 899888 5433332 234589999996652 355
Q ss_pred EEecccCCCeEEEEecCCCCEEEEEe-CCCc--eeecCC-CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEe
Q 016134 168 AKLEGHEKAVSGIALPLRSDKLFSGS-RDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAV 243 (394)
Q Consensus 168 ~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~--vWd~~~-~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~ 243 (394)
..+..+...+..++|+|++++|++++ .++. +|++.. +....+. .+...... -....+...+.+++|
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~-------~~~~~~~~---p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTD-------TVQHSGHG---PRPEQDGSHIHYTDL 148 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEE-------EEECCCCC---SSTTCSSCCEEEEEE
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecc-------eeecCCCC---CCccccCCCceEEEE
Confidence 66667888999999999999999888 5565 699863 3322110 00000000 000012345778888
Q ss_pred c--CCeEEEEeCCCeEEEEeCC-CCcee--EEEcCC-CCCcEEEEEc--CCEEEE-EeCCCcEEEEEeCC--Ccee--eE
Q 016134 244 G--RSRLCSGSMDNTIRVWELD-TLEPV--MTLNDH-TDAPMSLLCW--DQFLLS-CSLDHTIKVWFATG--RGNL--EA 310 (394)
Q Consensus 244 ~--~~~l~sgs~Dg~V~iwd~~-~~~~~--~~~~~h-~~~v~~l~~~--~~~l~s-~s~Dg~i~vwd~~~--~~~~--~~ 310 (394)
+ ++++++...++.|++||+. +++.. ..+..+ ...+..++|+ +++|++ ...++.|.+|++.. ++.. ..
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence 6 5666666678999999998 45432 222322 2367788888 675555 55688999999874 3221 11
Q ss_pred eecccCC--cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC---ceeEEEec-CCcEEEEEECCCC-EEEEEeC-CC
Q 016134 311 AYTHKED--NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF---MERGRIFS-KHEVRVIEIGPDK-LFFTGDG-AG 382 (394)
Q Consensus 311 ~~~~~~~--~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~---~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~-Dg 382 (394)
+...... .......+.|+|+|+.++++...++.|.+|++... ..+..+.. ...+..++|+||+ +|++++. ++
T Consensus 229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 2111111 01223344579999955577777999999999732 33444443 4468899999999 6777665 58
Q ss_pred eEEEEeCCC
Q 016134 383 MLGVWKLLA 391 (394)
Q Consensus 383 ~I~vWd~~~ 391 (394)
.|.+|+++.
T Consensus 309 ~v~v~~~d~ 317 (347)
T 3hfq_A 309 NATLYARDL 317 (347)
T ss_dssp EEEEEEECT
T ss_pred cEEEEEEeC
Confidence 999996653
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.74 E-value=3.6e-17 Score=164.46 Aligned_cols=258 Identities=7% Similarity=-0.106 Sum_probs=171.9
Q ss_pred cccccccCCC-CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeec-CCCCCeEEEEEc
Q 016134 83 NNLWVSSGSE-DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVR-GDECRFLHSWFC 160 (394)
Q Consensus 83 ~~~~~~s~s~-d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~-g~~~~~i~iWd~ 160 (394)
|+.+|+++|. |++++||+++++.... ...++...+..+. |+|+ ..+++...+ ++....|.+++.
T Consensus 32 DG~~la~~s~~~g~~~lw~~~~g~~~~------------lt~~~~~~~~~~~-~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 32 DGDKLLVVGFSEGSVNAYLYDGGETVK------------LNREPINSVLDPH-YGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp TTTEEEEEEEETTEEEEEEEETTEEEE------------CCSSCCSEECEEC-TTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred CCCeEEEEEccCCceeEEEEcCCCcEe------------eeccccccccccc-CCCC-eEEEEeccCCCCcceEEEEEec
Confidence 8889999888 9999999997665432 1122224677777 9998 665544432 222223444554
Q ss_pred --CCCceEEEEecccCCCeEEEEecCCCC--EEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCC
Q 016134 161 --GEGLTMLAKLEGHEKAVSGIALPLRSD--KLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHT 235 (394)
Q Consensus 161 --~~~~~~~~~l~~h~~~V~~l~~s~~~~--~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~ 235 (394)
... .. .+..+. .+...+|+|+++ .+++++.++. |||+++++...+..+.
T Consensus 98 ~~~g~--~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~---------------------- 151 (582)
T 3o4h_A 98 SRPGE--EQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP---------------------- 151 (582)
T ss_dssp TSTTC--CE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES----------------------
T ss_pred cCCCc--cc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC----------------------
Confidence 333 22 333222 344667777775 4555556655 7999888765432211
Q ss_pred CCEEEEEec--CCeEEEEeCC----CeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCC--cEEEEEeCCC
Q 016134 236 RPVTCLAVG--RSRLCSGSMD----NTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDH--TIKVWFATGR 305 (394)
Q Consensus 236 ~~V~~l~~~--~~~l~sgs~D----g~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg--~i~vwd~~~~ 305 (394)
. .+++|+ +++|++++.| ..|++||+.+++.. .+..|...+..++|+ |+.|+++..++ .|++||+.++
T Consensus 152 ~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 152 G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 1 444554 7888877777 78999999987754 677888889999998 78999888888 8999999887
Q ss_pred ceeeEeecccCCcceEE----EEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeC
Q 016134 306 GNLEAAYTHKEDNGVLA----LGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 306 ~~~~~~~~~~~~~~~~~----~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~ 380 (394)
+.. .+..+........ ....|+|||. ++++++.|++++||++ ++... .....|.+++|+ ++ ++++++.
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 229 SVE-DLELPSKDFSSYRPTAITWLGYLPDGR-LAVVARREGRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp CEE-ECCCSCSHHHHHCCSEEEEEEECTTSC-EEEEEEETTEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred cEE-EccCCCcChhhhhhccccceeEcCCCc-EEEEEEcCCcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcC
Confidence 665 4433332221111 1122799995 9999999999999999 54443 234678999999 88 7777777
Q ss_pred CCe---EEEEeCC
Q 016134 381 AGM---LGVWKLL 390 (394)
Q Consensus 381 Dg~---I~vWd~~ 390 (394)
+.. |.+|++.
T Consensus 302 ~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 302 LSTPPRIVSLPSG 314 (582)
T ss_dssp TTEEEEEEEETTC
T ss_pred CCCCCeEEEEcCC
Confidence 644 5666553
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.74 E-value=6.3e-17 Score=166.19 Aligned_cols=309 Identities=11% Similarity=-0.014 Sum_probs=176.8
Q ss_pred CCCcccC-CCCCcccccccccccccCCCCCcccccccCCCCC--CCCCCCCCC---c-cccccCCCCccceeeecccccc
Q 016134 66 SNPKLAK-KSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGY--TGPKNSSSA---S-STVSDESGDKSTSKKTTLKNVC 138 (394)
Q Consensus 66 ~~~~~~~-~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~--~~~~~s~~~---~-~~~~~~~g~~~~v~~~~~~~~~ 138 (394)
.+.+.+. .....|. +..+++.++|+ | +||++++.. ......... . ......+.+...+..++ ++|+
T Consensus 20 ~~~~~~~~~~~~~w~----g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~-~spd 92 (706)
T 2z3z_A 20 FYNFYPEYVVGLQWM----GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTL-DAGR 92 (706)
T ss_dssp --------CTTCEEE----TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEE-ETTT
T ss_pred ccccccccCCCCcCc----CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEE-ECCC
Confidence 4444432 3445665 33456666677 7 999998875 211000000 0 00000111124578888 9999
Q ss_pred ccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCC-----CcEEEecC
Q 016134 139 CHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIES-----SAEFSLDG 211 (394)
Q Consensus 139 ~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~-----~~~~~~~~ 211 (394)
.+++.. .+ +.|++||+.++ +. ..+..+...+.+++|+|||++|+++ .|+. +||+.+ ++...+..
T Consensus 93 -~~~~~~-~~----~~i~~~d~~~~-~~-~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~ 163 (706)
T 2z3z_A 93 -GLVVLF-TQ----GGLVGFDMLAR-KV-TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTI 163 (706)
T ss_dssp -TEEEEE-ET----TEEEEEETTTT-EE-EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCS
T ss_pred -CeEEEE-EC----CEEEEEECCCC-ce-EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEecc
Confidence 444332 23 59999999876 43 3455677889999999999999996 5566 699988 77664432
Q ss_pred C-CCc--------------EEEEEEcCC--EEEEEecCCCCCCEEEEE-ecC--CeEEE--------EeCCCeEEEEeCC
Q 016134 212 P-VGE--------------VYSMVVANE--MLFAGAQDGHTRPVTCLA-VGR--SRLCS--------GSMDNTIRVWELD 263 (394)
Q Consensus 212 ~-~~~--------------v~~l~~~~~--~l~~~~~~~h~~~V~~l~-~~~--~~l~s--------gs~Dg~V~iwd~~ 263 (394)
. ... +..+.|+|+ .|+.+..+.....+..+. ... ..+.. ...+..|++||+.
T Consensus 164 ~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 164 DGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 2 222 356667766 455444332211111111 000 00000 1145689999999
Q ss_pred CCceeEEEc--CCCCCcEEEEEc--CCEEEEEeCCC-----cEEEEEeCCCceeeEeecccCCcce-EEEEeeECC--CC
Q 016134 264 TLEPVMTLN--DHTDAPMSLLCW--DQFLLSCSLDH-----TIKVWFATGRGNLEAAYTHKEDNGV-LALGGLNDP--DG 331 (394)
Q Consensus 264 ~~~~~~~~~--~h~~~v~~l~~~--~~~l~s~s~Dg-----~i~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~~s~--~g 331 (394)
+++...... .|...+.++.|+ ++.|++++.++ .|++||+.+++....+......... ......|+| +|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 244 TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC
Confidence 887654432 466778999998 78888887775 8999999887444444322221111 011234699 99
Q ss_pred CcEEEEEeCCCeEEEEECC-CCceeEEEec-CCcEEE-EEECCCC-EE-EEEeCCC----eEEEEeCCC
Q 016134 332 KPVLICACNDNTVHLYELP-SFMERGRIFS-KHEVRV-IEIGPDK-LF-FTGDGAG----MLGVWKLLA 391 (394)
Q Consensus 332 ~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~-~~~v~~-l~~sp~~-~l-~tgs~Dg----~I~vWd~~~ 391 (394)
+ +|+++..|+.++||++. ++..+..+.. ...+.. ++|+|++ .| +++..++ .|..||+.+
T Consensus 324 ~-~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 391 (706)
T 2z3z_A 324 Q-FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKG 391 (706)
T ss_dssp E-EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTC
T ss_pred E-EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCC
Confidence 8 88999999999999886 5555555544 445766 7999999 54 4555555 566666544
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.74 E-value=4.1e-16 Score=144.83 Aligned_cols=216 Identities=18% Similarity=0.155 Sum_probs=142.8
Q ss_pred CCCeEEEEEcCC-C-ceEEEEecccCCCeEEEEecCCCCEEEEEeCC-Cc--eeecC--CCcEEEecCCCCcEEEEEEcC
Q 016134 151 ECRFLHSWFCGE-G-LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD-GT--AWNIE--SSAEFSLDGPVGEVYSMVVAN 223 (394)
Q Consensus 151 ~~~~i~iWd~~~-~-~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-g~--vWd~~--~~~~~~~~~~~~~v~~l~~~~ 223 (394)
.++.|++|++.. + .+.+.. ..|...+.+++|+|++++|++++.+ +. +|+++ +++...+..
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~------------ 79 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE------------ 79 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE------------
T ss_pred CCCeEEEEEECCCCcEEEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc------------
Confidence 355999999953 2 233333 4578889999999999999998887 66 69987 554321100
Q ss_pred CEEEEEecCCCCCCEEEEEec--CCeEEEEe-CCCeEEEEeC---CCCceeEEEcCCCCCcEEEEEc--CCEEEEEe-CC
Q 016134 224 EMLFAGAQDGHTRPVTCLAVG--RSRLCSGS-MDNTIRVWEL---DTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS-LD 294 (394)
Q Consensus 224 ~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs-~Dg~V~iwd~---~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~D 294 (394)
...+ ..+..++|+ +++|++++ .++.|.+||+ .+.+.+..+..+ ..+.+++|+ +++|++++ .+
T Consensus 80 -------~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 80 -------SALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp -------EECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGG
T ss_pred -------cccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCC
Confidence 0011 255667776 56565555 4899999999 444555555544 457888888 67777777 89
Q ss_pred CcEEEEEeCCCceeeEee----cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC--Cce--eEEEec------
Q 016134 295 HTIKVWFATGRGNLEAAY----THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS--FME--RGRIFS------ 360 (394)
Q Consensus 295 g~i~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~--~~~--~~~~~~------ 360 (394)
+.|++||+.....+.... ......... .+.|+|+++.+++++..++.|.+|++.. ++. ...+..
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~ 228 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPR--HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFS 228 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEE--EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCC
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcc--eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcccc
Confidence 999999998733232211 111111222 3457999995556666899999999954 322 222221
Q ss_pred -CCcEEEEEECCCC-EEE-EEeCCCeEEEEeCC
Q 016134 361 -KHEVRVIEIGPDK-LFF-TGDGAGMLGVWKLL 390 (394)
Q Consensus 361 -~~~v~~l~~sp~~-~l~-tgs~Dg~I~vWd~~ 390 (394)
...+..++|+|++ +|+ +...++.|.+|++.
T Consensus 229 ~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 229 DTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 2357789999999 555 56689999999987
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=1.6e-16 Score=163.46 Aligned_cols=232 Identities=11% Similarity=0.001 Sum_probs=161.3
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCC---CeEEEEecCCCCEEEEEeCCCc--------
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEK---AVSGIALPLRSDKLFSGSRDGT-------- 197 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~sgs~Dg~-------- 197 (394)
...++ |+|++.++++ . .++.|++||+.++ +....+.+|.. .|.+++|+|||++|++++.++.
T Consensus 19 ~~~~~-~spdg~~~~~-~----~dg~i~~~d~~~g-~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 19 DPEAK-WISDTEFIYR-E----QKGTVRLWNVETN-TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCC-BSSSSCBCCC-C----SSSCEEEBCGGGC-CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccE-EcCCCcEEEE-e----CCCCEEEEECCCC-cEEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 34555 9999998765 2 3459999999887 55667777765 4999999999999999987643
Q ss_pred ---eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 198 ---AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 198 ---vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
+||+++++...+.... +|...+..++|+ ++.|+.++. +.|++||+.+++..+...
T Consensus 92 ~i~~~d~~~~~~~~l~~~~-------------------~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPE-------------------VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp EEEEEESSSCCCEECCCTT-------------------CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC
T ss_pred eEEEEECCCCceEeccCCc-------------------cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec
Confidence 6898888764333221 344456667776 677888775 799999999988777666
Q ss_pred CCCCCc------------------EEEEEc--CCEEEEEeCCC----------------------------------cEE
Q 016134 273 DHTDAP------------------MSLLCW--DQFLLSCSLDH----------------------------------TIK 298 (394)
Q Consensus 273 ~h~~~v------------------~~l~~~--~~~l~s~s~Dg----------------------------------~i~ 298 (394)
.+...+ .++.|+ ++.|++++.|+ .|+
T Consensus 152 ~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~ 231 (723)
T 1xfd_A 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLH 231 (723)
T ss_dssp CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEE
T ss_pred CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEE
Confidence 544444 789998 78888887553 799
Q ss_pred EEEeCCCceeeEeecccC--CcceEEEEeeECCCCCcEEEEEeC----CCeEEEEECCCCceeEEEec--CCcE----EE
Q 016134 299 VWFATGRGNLEAAYTHKE--DNGVLALGGLNDPDGKPVLICACN----DNTVHLYELPSFMERGRIFS--KHEV----RV 366 (394)
Q Consensus 299 vwd~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~g~~~l~sgs~----dg~I~iwd~~~~~~~~~~~~--~~~v----~~ 366 (394)
+||+.+++....+..+.. ........+.|+|||+ +|++... +..|++||+.+++....+.. ...+ ..
T Consensus 232 ~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 310 (723)
T 1xfd_A 232 VIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEE 310 (723)
T ss_dssp EEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCC
T ss_pred EEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCC
Confidence 999987765444433210 0122233456899998 6665542 36799999999876655432 2333 37
Q ss_pred EEECCCC-EEEE--EeCCC------eEEEEe
Q 016134 367 IEIGPDK-LFFT--GDGAG------MLGVWK 388 (394)
Q Consensus 367 l~~sp~~-~l~t--gs~Dg------~I~vWd 388 (394)
++|+||| .|+. +..++ .|.+||
T Consensus 311 ~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 311 PVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp CEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred ceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 8999999 4443 55777 566666
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.73 E-value=3.9e-16 Score=167.47 Aligned_cols=297 Identities=8% Similarity=-0.033 Sum_probs=204.9
Q ss_pred cccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeecccc-ccccccCCCeecCCCCCeE
Q 016134 77 SYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKN-VCCHWLLGNCVRGDECRFL 155 (394)
Q Consensus 77 ~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~-~~~~~~~~~~~~g~~~~~i 155 (394)
+|++ ++.+++++ .|..+.+|++++........ ...... .....+...+..+. |+ |++.+++... ++.|
T Consensus 251 ~~Sp--DG~~la~~-~~~~i~~~d~~~~~l~~l~~-~~~~~~-~~~~~~~~~v~~~~-~S~pdG~~la~~~-----~~~i 319 (1045)
T 1k32_A 251 HLNT--DGRRILFS-KGGSIYIFNPDTEKIEKIEI-GDLESP-EDRIISIPSKFAED-FSPLDGDLIAFVS-----RGQA 319 (1045)
T ss_dssp EEEE--SSSCEEEE-ETTEEEEECTTTCCEEECCC-CCCCBC-CSEEEECGGGGEEE-EEECGGGCEEEEE-----TTEE
T ss_pred eEcC--CCCEEEEE-eCCEEEEecCCceEeeeecc-Cccccc-ccccccccccceee-ecCCCCCEEEEEE-----cCEE
Confidence 5555 77777775 58899999985433321000 000000 00001233577888 99 9999998765 3489
Q ss_pred EEEEcCCCceEEEEecccCC-CeEEEEecCCCCEEEEEeCCCcee---ecCCCcEEEecCCCCcEEEEEEcCC--EEEEE
Q 016134 156 HSWFCGEGLTMLAKLEGHEK-AVSGIALPLRSDKLFSGSRDGTAW---NIESSAEFSLDGPVGEVYSMVVANE--MLFAG 229 (394)
Q Consensus 156 ~iWd~~~~~~~~~~l~~h~~-~V~~l~~s~~~~~l~sgs~Dg~vW---d~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~ 229 (394)
.+|+..++ + ...+..|.. .+..++|+ +++.|+.++.+..+| ++.+++...+..+...+..++|+|+ .++.+
T Consensus 320 ~~~~~~~~-~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~ 396 (1045)
T 1k32_A 320 FIQDVSGT-Y-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVA 396 (1045)
T ss_dssp EEECTTSS-B-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEE
T ss_pred EEEcCCCC-c-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEE
Confidence 99999776 3 334677888 89999999 999999999877666 7777777766677788999999998 66666
Q ss_pred ecC------------------CCCCCEEEEEec--CCeEEEEeCCC----------eEEEEeCCCCceeEEEcCCCCCcE
Q 016134 230 AQD------------------GHTRPVTCLAVG--RSRLCSGSMDN----------TIRVWELDTLEPVMTLNDHTDAPM 279 (394)
Q Consensus 230 ~~~------------------~h~~~V~~l~~~--~~~l~sgs~Dg----------~V~iwd~~~~~~~~~~~~h~~~v~ 279 (394)
..+ +|...+.+++|+ +++|++++.++ .|++||+.+++ +..+..|...+.
T Consensus 397 ~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~ 475 (1045)
T 1k32_A 397 NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDY 475 (1045)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEE
T ss_pred CCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccC
Confidence 544 566777888897 67788877654 99999999877 677788888889
Q ss_pred EEEEc--CCEEEEEeCCCcEEEEEeCCCce-------eeE--------------------------eecccC------Cc
Q 016134 280 SLLCW--DQFLLSCSLDHTIKVWFATGRGN-------LEA--------------------------AYTHKE------DN 318 (394)
Q Consensus 280 ~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~-------~~~--------------------------~~~~~~------~~ 318 (394)
.+.|+ +++|++.+.++..++|+...... +.. +..... ..
T Consensus 476 ~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~ 555 (1045)
T 1k32_A 476 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVD 555 (1045)
T ss_dssp EEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCC
T ss_pred CceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCC
Confidence 99998 78999999888877776543211 000 000000 00
Q ss_pred ceEEEEeeECCCCCcEEEE-------------EeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCeE
Q 016134 319 GVLALGGLNDPDGKPVLIC-------------ACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGML 384 (394)
Q Consensus 319 ~~~~~~~~~s~~g~~~l~s-------------gs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I 384 (394)
......+.++|++. ++++ ......|.+||+.+++..... ..+..++|+||| +|++++.+ .|
T Consensus 556 ~~~~~~~~~s~dg~-~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~~v~~~~~S~DG~~l~~~~~~-~i 630 (1045)
T 1k32_A 556 PGDYRMIIPLESSI-LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK---NNLTDLRLSADRKTVMVRKDD-GK 630 (1045)
T ss_dssp CBCEEEEEECSSEE-EEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---EEEEEEEECTTSCEEEEEETT-SC
T ss_pred CCChhheEEcCCCe-EEEEecccCcccccccccCCCceEEEEECCCCcEEEee---cCcceEEECCCCCEEEEEcCC-cE
Confidence 01112334689997 5554 123557899999887654332 568899999999 88888777 79
Q ss_pred EEEeCCCCC
Q 016134 385 GVWKLLAKP 393 (394)
Q Consensus 385 ~vWd~~~~~ 393 (394)
++||+.++.
T Consensus 631 ~~~d~~~~~ 639 (1045)
T 1k32_A 631 IYTFPLEKP 639 (1045)
T ss_dssp EEEEESSCT
T ss_pred EEEeCccCc
Confidence 999997754
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.73 E-value=7.3e-16 Score=143.61 Aligned_cols=230 Identities=11% Similarity=0.031 Sum_probs=153.6
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccC-CCeEEEEecCCCCEEEE-EeCCCc--eeecCCCcEEEe-
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHE-KAVSGIALPLRSDKLFS-GSRDGT--AWNIESSAEFSL- 209 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s-gs~Dg~--vWd~~~~~~~~~- 209 (394)
+++.+.++++...++ .|++||..++ +.+..+..+. ..+..++|+|++++++. ...++. +||+++++....
T Consensus 7 ~~~~~~~~v~~~~~~----~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPN----NLHVVDVASD-TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCTTCEEEEEEETTT----EEEEEETTTT-EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCCEEEEEeCCCC----eEEEEECCCC-cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 455566666555444 9999999887 6666666543 26789999999987654 445666 599988876532
Q ss_pred cCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCC------------CeEEEEeCCCCc---eeEEEc
Q 016134 210 DGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMD------------NTIRVWELDTLE---PVMTLN 272 (394)
Q Consensus 210 ~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~D------------g~V~iwd~~~~~---~~~~~~ 272 (394)
...... . .+...+..++|+ +++|++++.+ +.|.+||+.+++ .+..+.
T Consensus 82 ~~~~~~--------~--------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 82 NLSSVP--------G--------EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp ESCCST--------T--------EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred Eccccc--------c--------cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 111100 0 001123445564 5567766654 899999998743 344444
Q ss_pred CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCC------------------c----c---------
Q 016134 273 DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED------------------N----G--------- 319 (394)
Q Consensus 273 ~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~------------------~----~--------- 319 (394)
. ...+.+++|+ ++ +++++ +.|.+||+.+++....+...... . .
T Consensus 146 ~-~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 221 (349)
T 1jmx_B 146 M-PRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 221 (349)
T ss_dssp C-CSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--
T ss_pred C-CCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCC
Confidence 3 3467888887 56 55554 34999999887766554322100 0 0
Q ss_pred ---------------------------------eEEEEeeECC-CCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEE
Q 016134 320 ---------------------------------VLALGGLNDP-DGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVR 365 (394)
Q Consensus 320 ---------------------------------~~~~~~~~s~-~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~ 365 (394)
.......++| +++ +|+++ ++.|.+||+.+++.+..+.....+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~ 298 (349)
T 1jmx_B 222 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNRLAKYDLKQRKLIKAANLDHTYY 298 (349)
T ss_dssp -----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESEEEEEETTTTEEEEEEECSSCCC
T ss_pred CcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCeEEEEECccCeEEEEEcCCCCcc
Confidence 0112334678 998 66666 8899999999998888877767788
Q ss_pred EEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 366 VIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 366 ~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+++|+|++ +|++++.++.|.+||+.+.
T Consensus 299 ~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 299 CVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ceEECCCCCEEEEecCCCeEEEEecccc
Confidence 99999998 7777888999999998764
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.72 E-value=2e-16 Score=153.44 Aligned_cols=207 Identities=14% Similarity=0.008 Sum_probs=137.3
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCC----------ceEEE----EecccCCCeEEEEecCCCCEEE----
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEG----------LTMLA----KLEGHEKAVSGIALPLRSDKLF---- 190 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~----------~~~~~----~l~~h~~~V~~l~~s~~~~~l~---- 190 (394)
+..++ +++...+++.++.++ |+||+...- ..... ....|...|++++|+|++++|+
T Consensus 39 ~n~la-vs~~~~~l~~~~~dg-----v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 39 SSLLA-VSNKYGLVFAGGASG-----LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CBCEE-EETTTTEEEEEETTE-----EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred ccEEE-EecCCCEEEEECCCE-----EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 44555 777777776554332 788764210 01110 1123567899999999999999
Q ss_pred EEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCC
Q 016134 191 SGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTL 265 (394)
Q Consensus 191 sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~ 265 (394)
+++.|+. |||+++..... ......+..+ ....+|...|.+++|+ +++|++++.|++|++||++++
T Consensus 113 sgs~d~~v~iwd~~~~~~~~-~~~~~~~~~~---------~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEA-KQQKRPFAYH---------KLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTT-CSSCCCSEEE---------ECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred ccCCCceEEEEEccccccCC-cCCcceeeee---------eccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 7888888 69987541000 0000000000 1223688899999997 468999999999999999998
Q ss_pred ceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccC---CcceEEEEeeECCCCCcEEEEEeC
Q 016134 266 EPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKE---DNGVLALGGLNDPDGKPVLICACN 340 (394)
Q Consensus 266 ~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~g~~~l~sgs~ 340 (394)
+.+....+|...|.+++|+ +++|++++.|++|++||++ ++....+..+.. ........+.|++++..+++....
T Consensus 183 ~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~ 261 (434)
T 2oit_A 183 VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA 261 (434)
T ss_dssp EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccC
Confidence 8777777889999999999 8899999999999999998 444444443322 112234445577877633334444
Q ss_pred CC------eEEEEECCCC
Q 016134 341 DN------TVHLYELPSF 352 (394)
Q Consensus 341 dg------~I~iwd~~~~ 352 (394)
|| .+++|+++..
T Consensus 262 dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 262 DGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCSSSCCEEEEEECCCT
T ss_pred CCccCCCCceEEEEeccC
Confidence 53 3899999865
No 152
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.72 E-value=4.3e-16 Score=167.14 Aligned_cols=255 Identities=7% Similarity=-0.018 Sum_probs=180.1
Q ss_pred ccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCce
Q 016134 86 WVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLT 165 (394)
Q Consensus 86 ~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~ 165 (394)
.+.+++.|.+++||.++...-.. . ...++. .+.... ++|++.+++... ++.|++|+.... +
T Consensus 216 l~~~~~~dg~~~l~~~~~~g~~~-~----------~l~~~~-~~~~~~-~SpDG~~la~~~-----~~~i~~~d~~~~-~ 276 (1045)
T 1k32_A 216 IYFITDIDGFGQIYSTDLDGKDL-R----------KHTSFT-DYYPRH-LNTDGRRILFSK-----GGSIYIFNPDTE-K 276 (1045)
T ss_dssp EEEEECTTSSCEEEEEETTSCSC-E----------ECCCCC-SSCEEE-EEESSSCEEEEE-----TTEEEEECTTTC-C
T ss_pred EEEEEeccCceEEEEEeCCCCcc-e----------EecCCC-Ccceee-EcCCCCEEEEEe-----CCEEEEecCCce-E
Confidence 33455668899999876422100 0 111222 234455 999999887652 458999998443 3
Q ss_pred EEEEecc-----------cCCCeEEEEec-CCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 166 MLAKLEG-----------HEKAVSGIALP-LRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 166 ~~~~l~~-----------h~~~V~~l~~s-~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
+..+.+ |...|.+++|+ |||++|++++ ++. +|++.++....+..+
T Consensus 277 -l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~------------------- 335 (1045)
T 1k32_A 277 -IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEP------------------- 335 (1045)
T ss_dssp -EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCC-------------------
T ss_pred -eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCC-------------------
Confidence 335555 44579999999 9999999988 555 577777765554333
Q ss_pred CCCCC-CEEEEEec-CCeEEEEeCCCeEE-EEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCc
Q 016134 232 DGHTR-PVTCLAVG-RSRLCSGSMDNTIR-VWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRG 306 (394)
Q Consensus 232 ~~h~~-~V~~l~~~-~~~l~sgs~Dg~V~-iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~ 306 (394)
.. .+..++|+ ++.|++++.+..+. +||+.+++.. .+..|...+..++|+ +++|++++.++.|++||+.+++
T Consensus 336 ---~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~ 411 (1045)
T 1k32_A 336 ---LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 411 (1045)
T ss_dssp ---SCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ---CcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc
Confidence 33 45555665 44677777788888 9999877654 445788889999998 7899999999999999999887
Q ss_pred eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC----------CeEEEEECCCCceeEEEe-cCCcEEEEEECCCC-E
Q 016134 307 NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND----------NTVHLYELPSFMERGRIF-SKHEVRVIEIGPDK-L 374 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d----------g~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~-~ 374 (394)
.......+......+ .|+|||+ +|++++.+ +.|++||+.+++ ...+. +...+..++|+||| +
T Consensus 412 ~~~~~~~~~~~v~~~----~~SpDG~-~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 412 PTVIERSREAMITDF----TISDNSR-FIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKN 485 (1045)
T ss_dssp EEEEEECSSSCCCCE----EECTTSC-EEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCE
T ss_pred eEEeccCCCCCccce----EECCCCC-eEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCE
Confidence 666554554443333 3699999 66666554 489999999876 33333 35668899999999 8
Q ss_pred EEEEeCCCeEEEEeCC
Q 016134 375 FFTGDGAGMLGVWKLL 390 (394)
Q Consensus 375 l~tgs~Dg~I~vWd~~ 390 (394)
|++++.++...+|+..
T Consensus 486 l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 486 LYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEEEESCCCCCEECSS
T ss_pred EEEEecccCCcCcchh
Confidence 8899988888888753
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.69 E-value=1.3e-13 Score=129.79 Aligned_cols=250 Identities=9% Similarity=0.065 Sum_probs=157.7
Q ss_pred ccccCCCeecCCCCCeEEEEEc--CCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCC----Cc--eeecCC--CcEE
Q 016134 139 CHWLLGNCVRGDECRFLHSWFC--GEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRD----GT--AWNIES--SAEF 207 (394)
Q Consensus 139 ~~~~~~~~~~g~~~~~i~iWd~--~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D----g~--vWd~~~--~~~~ 207 (394)
..++..+.+.++.++.|++|++ .++. +.+..+ +...+..++|+|++++|++++.+ +. +|++.. ++..
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 3444455666666778899876 3342 333333 78888999999999999999986 44 588765 4432
Q ss_pred ---EecCCCCcEEEEEEcCCEEEEEecC------------C---------------------CCCCEEEEEec--CCeEE
Q 016134 208 ---SLDGPVGEVYSMVVANEMLFAGAQD------------G---------------------HTRPVTCLAVG--RSRLC 249 (394)
Q Consensus 208 ---~~~~~~~~v~~l~~~~~~l~~~~~~------------~---------------------h~~~V~~l~~~--~~~l~ 249 (394)
....+......+++....++++... + +...+.+++|+ +++|+
T Consensus 91 ~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred EeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 2233445566777733356555432 0 01123678887 56555
Q ss_pred EE-eCCCeEEEEeCCCCc-------ee------EEEcCCCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCCCcee--eE
Q 016134 250 SG-SMDNTIRVWELDTLE-------PV------MTLNDHTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATGRGNL--EA 310 (394)
Q Consensus 250 sg-s~Dg~V~iwd~~~~~-------~~------~~~~~h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~~~~~--~~ 310 (394)
++ ..++.|++|++.... .. .....+...+..++|+ +++|++++ .++.|.+||+.+++.. ..
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEE
Confidence 54 458999999887533 11 1122344567889998 67777777 6899999999865432 22
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeC-CCeEEEEECC--CCc--eeEEEecCCcEEEEEECCCC-EEEEEe-CCCe
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACN-DNTVHLYELP--SFM--ERGRIFSKHEVRVIEIGPDK-LFFTGD-GAGM 383 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~-dg~I~iwd~~--~~~--~~~~~~~~~~v~~l~~sp~~-~l~tgs-~Dg~ 383 (394)
+...... ......+.|+|+|+.++++... ++.|.+|++. +++ .+..+.....+..++|+|++ +|++++ .++.
T Consensus 251 ~~~~~~~-~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 251 VAADTVN-AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp EESCSSC-CCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTE
T ss_pred EecCCCC-CCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCC
Confidence 2221111 1111234579999944344444 5899999996 343 33344444568899999999 677766 6789
Q ss_pred EEEEeCCC
Q 016134 384 LGVWKLLA 391 (394)
Q Consensus 384 I~vWd~~~ 391 (394)
|.+|+++.
T Consensus 330 v~v~~~d~ 337 (361)
T 3scy_A 330 IQIFERDQ 337 (361)
T ss_dssp EEEEEECT
T ss_pred EEEEEEEC
Confidence 99987653
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=1.5e-14 Score=133.85 Aligned_cols=214 Identities=8% Similarity=-0.031 Sum_probs=144.4
Q ss_pred CCCeEEEEEcCCCceEEEEecc-cCC-CeEEEEecCCCCEEEE-EeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCE
Q 016134 151 ECRFLHSWFCGEGLTMLAKLEG-HEK-AVSGIALPLRSDKLFS-GSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEM 225 (394)
Q Consensus 151 ~~~~i~iWd~~~~~~~~~~l~~-h~~-~V~~l~~s~~~~~l~s-gs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~ 225 (394)
.++.|++||..++ +.+..+.. +.. .+..++|+|++++|+. +..++. +||+.+++.+........
T Consensus 9 ~~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~---------- 77 (337)
T 1pby_B 9 RPDKLVVIDTEKM-AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP---------- 77 (337)
T ss_dssp TTTEEEEEETTTT-EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT----------
T ss_pred CCCeEEEEECCCC-cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc----------
Confidence 3459999999887 66666653 322 5889999999987654 455566 599988876532111000
Q ss_pred EEEEecCCCCCCEEEEEec--CCeEEEEe------------CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEE
Q 016134 226 LFAGAQDGHTRPVTCLAVG--RSRLCSGS------------MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLL 289 (394)
Q Consensus 226 l~~~~~~~h~~~V~~l~~~--~~~l~sgs------------~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~ 289 (394)
..|...+.+++|+ +++|+++. .++.|.+||+.+++.+..+.. ...+..+.|+ +++|+
T Consensus 78 ------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~ 150 (337)
T 1pby_B 78 ------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLY 150 (337)
T ss_dssp ------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEE
T ss_pred ------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEE
Confidence 0011133455665 55677765 579999999999888887764 4557778887 66677
Q ss_pred EEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC-----------------------eEEE
Q 016134 290 SCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN-----------------------TVHL 346 (394)
Q Consensus 290 s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg-----------------------~I~i 346 (394)
++ ++.|.+||+.+++....+........ . .++|++..+++++..++ .|.+
T Consensus 151 ~~--~~~i~~~d~~~~~~~~~~~~~~~~~~-~----~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 223 (337)
T 1pby_B 151 GL--GRDLHVMDPEAGTLVEDKPIQSWEAE-T----YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLT 223 (337)
T ss_dssp EE--SSSEEEEETTTTEEEEEECSTTTTTT-T----BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEE
T ss_pred Ee--CCeEEEEECCCCcEeeeeeccccCCC-c----eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEE
Confidence 76 68999999998877665544331111 1 35888874444443333 4789
Q ss_pred EECCCCceeEEEe---cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 347 YELPSFMERGRIF---SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 347 wd~~~~~~~~~~~---~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
||+.+++.. .+. ....+.+++|+|++ +|+++ ++.|.+||+.+.
T Consensus 224 ~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~ 270 (337)
T 1pby_B 224 MDLETGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp EETTTCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred EeCCCCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC
Confidence 999998765 222 24568899999999 77777 799999998753
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.66 E-value=2.4e-15 Score=151.03 Aligned_cols=224 Identities=9% Similarity=0.010 Sum_probs=152.2
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccC-CCeEEEEecCCCCEEEEEeC---CCc--eeec
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHE-KAVSGIALPLRSDKLFSGSR---DGT--AWNI 201 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~sgs~---Dg~--vWd~ 201 (394)
.|.++. ++|++.+|+..... +++++||++.++ +.. .+..|. ..|..++|+|| +.+++++. +.. ||.+
T Consensus 23 ~~~~~~-~~~DG~~la~~s~~---~g~~~lw~~~~g-~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 23 EKYSLQ-GVVDGDKLLVVGFS---EGSVNAYLYDGG-ETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp CEEEEE-EEETTTEEEEEEEE---TTEEEEEEEETT-EEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred chheee-cCCCCCeEEEEEcc---CCceeEEEEcCC-CcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 577888 99999999876651 348999998655 544 444555 68999999999 78888775 222 5544
Q ss_pred CC---CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCC
Q 016134 202 ES---SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDA 277 (394)
Q Consensus 202 ~~---~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~ 277 (394)
.. +....+... +...+.++.++++ .+++.+.++.+.|||+.++++......+ .
T Consensus 96 ~~~~~g~~~~l~~~---------------------~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~- 152 (582)
T 3o4h_A 96 NTSRPGEEQRLEAV---------------------KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G- 152 (582)
T ss_dssp ETTSTTCCEECTTS---------------------CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S-
T ss_pred eccCCCccccccCC---------------------CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C-
Confidence 32 222222111 1112344555553 3334444445559999988766554433 3
Q ss_pred cEEEEEc--CCEEEEEeCC----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC--eEEEEEC
Q 016134 278 PMSLLCW--DQFLLSCSLD----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN--TVHLYEL 349 (394)
Q Consensus 278 v~~l~~~--~~~l~s~s~D----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg--~I~iwd~ 349 (394)
.++.|+ |++|++++.| ..|++||+.+++.. .+..+... .....|+|||+ .|+++..++ .|++||+
T Consensus 153 -~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~----~~~~~~SpDG~-~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 -FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGS----FSSASISPGMK-VTAGLETAREARLVTVDP 225 (582)
T ss_dssp -CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCE----EEEEEECTTSC-EEEEEECSSCEEEEEECT
T ss_pred -ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCc----cccceECCCCC-EEEEccCCCeeEEEEEcC
Confidence 667776 8999988877 78999999876644 34333221 23456899999 777888888 8999999
Q ss_pred CCCceeEEEec-CCcEEEEE--------ECCCC-EEEEEeCCCeEEEEeC
Q 016134 350 PSFMERGRIFS-KHEVRVIE--------IGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 350 ~~~~~~~~~~~-~~~v~~l~--------~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
.+++.. .+.. ...+..++ |+||| ++++++.|+.+++|++
T Consensus 226 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 226 RDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 988776 3332 33455556 99999 9999999999999997
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.65 E-value=2.1e-14 Score=134.29 Aligned_cols=227 Identities=14% Similarity=0.131 Sum_probs=140.1
Q ss_pred CeecCCCCCeEEEEEcC--CCceEEEEecccCCCeEEEEecCCCCEEEEEeC---CCc--eeecCCCcEEEecCCCCcEE
Q 016134 145 NCVRGDECRFLHSWFCG--EGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR---DGT--AWNIESSAEFSLDGPVGEVY 217 (394)
Q Consensus 145 ~~~~g~~~~~i~iWd~~--~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~---Dg~--vWd~~~~~~~~~~~~~~~v~ 217 (394)
+++.++.++.|++|++. ++.........+...+..++|+|+++ |++++. ++. +|++.+++...+..
T Consensus 8 g~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~------ 80 (347)
T 3hfq_A 8 GTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNT------ 80 (347)
T ss_dssp EECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEE------
T ss_pred EeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeee------
Confidence 34444445567777663 44222223445667888999999999 666554 344 69987665432110
Q ss_pred EEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEe-CCCeEEEEeCCC-C--ceeEEEcCC---------CCCcEEEE
Q 016134 218 SMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGS-MDNTIRVWELDT-L--EPVMTLNDH---------TDAPMSLL 282 (394)
Q Consensus 218 ~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs-~Dg~V~iwd~~~-~--~~~~~~~~h---------~~~v~~l~ 282 (394)
...+...+..++|+ +++|++++ .++.|.+||+.. + +.+..+... ...+.+++
T Consensus 81 -------------~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 147 (347)
T 3hfq_A 81 -------------VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTD 147 (347)
T ss_dssp -------------EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEE
T ss_pred -------------eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEE
Confidence 00233455566776 66777777 789999999963 2 233333221 12477888
Q ss_pred Ec--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC--Cce--eE
Q 016134 283 CW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS--FME--RG 356 (394)
Q Consensus 283 ~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~--~~~--~~ 356 (394)
++ ++++++...++.|++||+.....+................+.|+|+|+.++++...++.|.+|++.. ++. +.
T Consensus 148 ~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 148 LTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred ECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEee
Confidence 88 6766666678899999998333222222111111111123457999995666677889999999874 432 22
Q ss_pred EEec-C------CcEEEEEECCCC-EE-EEEeCCCeEEEEeCCC
Q 016134 357 RIFS-K------HEVRVIEIGPDK-LF-FTGDGAGMLGVWKLLA 391 (394)
Q Consensus 357 ~~~~-~------~~v~~l~~sp~~-~l-~tgs~Dg~I~vWd~~~ 391 (394)
.+.. . ..+..++|+||| +| ++...++.|.+|++..
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 228 IVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred eeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 2222 1 458999999999 55 5666799999999863
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=9.1e-16 Score=157.95 Aligned_cols=295 Identities=11% Similarity=0.007 Sum_probs=175.5
Q ss_pred CCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCcc---ceeeeccccccccccCCCeecC-
Q 016134 74 SPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKS---TSKKTTLKNVCCHWLLGNCVRG- 149 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~---~v~~~~~~~~~~~~~~~~~~~g- 149 (394)
...+|++ ++. ++..+.|+++++||++++.... ...++.. .+..++ |+|++.+|+.+....
T Consensus 19 ~~~~~s~--dg~-~~~~~~d~~i~~~~~~~g~~~~------------~~~~~~~~~~~~~~~~-~SpDg~~la~~~~~~~ 82 (719)
T 1z68_A 19 FFPNWIS--GQE-YLHQSADNNIVLYNIETGQSYT------------ILSNRTMKSVNASNYG-LSPDRQFVYLESDYSK 82 (719)
T ss_dssp CCCEESS--SSE-EEEECTTSCEEEEESSSCCEEE------------EECHHHHHTTTCSEEE-ECTTSSEEEEEEEEEE
T ss_pred CccEECC--CCe-EEEEcCCCCEEEEEcCCCcEEE------------EEccccccccceeeEE-ECCCCCeEEEEecCce
Confidence 3567777 764 4444569999999999887532 1112221 377788 999999998776532
Q ss_pred ----CCCCeEEEEEcCCCceEE--EEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEec--CCCCcE---
Q 016134 150 ----DECRFLHSWFCGEGLTML--AKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLD--GPVGEV--- 216 (394)
Q Consensus 150 ----~~~~~i~iWd~~~~~~~~--~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~--~~~~~v--- 216 (394)
+.++.|++||+.++ +.+ ..+ ...+..++|+|||+.|+.+. |+. +|++.+++...+. ++...+
T Consensus 83 ~~~~s~~~~i~~~d~~~g-~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 83 LWRYSYTATYYIYDLSNG-EFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp CSSSCEEEEEEEEETTTT-EECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred eEEeecceEEEEEECCCC-ccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 22569999999887 331 222 35689999999999999987 455 6999888776543 222222
Q ss_pred --------------EEEEEcCC--EEEEEecCCCCCCEEEEEecCC----eEE------EE--eCCCeEEEEeCCCCcee
Q 016134 217 --------------YSMVVANE--MLFAGAQDGHTRPVTCLAVGRS----RLC------SG--SMDNTIRVWELDTLEPV 268 (394)
Q Consensus 217 --------------~~l~~~~~--~l~~~~~~~h~~~V~~l~~~~~----~l~------sg--s~Dg~V~iwd~~~~~~~ 268 (394)
..+.|+|| .|+.++.+.....+..+..... ... .| ..+..|++||+.+++.+
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~ 237 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV 237 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence 36777777 5555554432222222211100 000 00 12238999999987653
Q ss_pred --EE------EcCCCCCcEEEEEc--CCEEEEEeCC----CcEEEEE----eCCCceeeEe----ecccCCcce-EEEEe
Q 016134 269 --MT------LNDHTDAPMSLLCW--DQFLLSCSLD----HTIKVWF----ATGRGNLEAA----YTHKEDNGV-LALGG 325 (394)
Q Consensus 269 --~~------~~~h~~~v~~l~~~--~~~l~s~s~D----g~i~vwd----~~~~~~~~~~----~~~~~~~~~-~~~~~ 325 (394)
.. +.+|...+..++|+ ++++++.... ..|.+|| +.+++....+ ..+...... .....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (719)
T 1z68_A 238 GPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTP 317 (719)
T ss_dssp CCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCC
T ss_pred ceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCcc
Confidence 12 33577788999998 4455553322 2488899 6665544333 122222220 00023
Q ss_pred eECCCCCcEEE-EEeCCC--eEEEEECCCCceeEEEec-CCcEEEEEECCCC-EE-EEEeC----CCeEEEEeCCC
Q 016134 326 LNDPDGKPVLI-CACNDN--TVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LF-FTGDG----AGMLGVWKLLA 391 (394)
Q Consensus 326 ~~s~~g~~~l~-sgs~dg--~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l-~tgs~----Dg~I~vWd~~~ 391 (394)
.|+|+|+.+++ +...++ .|.+||+.+++. ..+.. ...+..+.+. ++ .| +++.. ++.+++|.+..
T Consensus 318 ~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 318 VFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 46999985544 344555 577778776653 33333 4457777766 66 44 44444 48899998764
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.62 E-value=3.4e-14 Score=132.24 Aligned_cols=232 Identities=9% Similarity=-0.038 Sum_probs=148.2
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
.+..+++++.|.+|++||++++...... ..+....+..+. ++|++.++.... ..++.|.+||+.+
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~-----------~~~~~~~~~~~~-~s~dg~~~~v~~---~~~~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSC-----------VMPDKFGPGTAM-MAPDNRTAYVLN---NHYGDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEE-----------ECSSCCSSCEEE-ECTTSSEEEEEE---TTTTEEEEEETTT
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEE-----------ecCCCCCCceeE-ECCCCCEEEEEe---CCCCcEEEEeCCC
Confidence 5667788899999999999987653211 111111345566 888887554222 3345899999988
Q ss_pred CceEEEEecc-c-----CCCeEEEEecCCCCEEEEEeCC------------Cc--eeecCCCcEEEecCCCCcEEEEEEc
Q 016134 163 GLTMLAKLEG-H-----EKAVSGIALPLRSDKLFSGSRD------------GT--AWNIESSAEFSLDGPVGEVYSMVVA 222 (394)
Q Consensus 163 ~~~~~~~l~~-h-----~~~V~~l~~s~~~~~l~sgs~D------------g~--vWd~~~~~~~~~~~~~~~v~~l~~~ 222 (394)
+ +.+..+.. + ...+..++|+|++++|++++.+ +. +||+++++..... ...
T Consensus 75 ~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~------~~~--- 144 (349)
T 1jmx_B 75 C-KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV------RTF--- 144 (349)
T ss_dssp T-EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS------EEE---
T ss_pred C-cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee------eec---
Confidence 7 55555543 2 2348899999999999999865 44 5888775432100 000
Q ss_pred CCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCC-------------------------
Q 016134 223 NEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHT------------------------- 275 (394)
Q Consensus 223 ~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~------------------------- 275 (394)
.+...+.+++|+ ++ +++++. .|.+||+.+++.+..+..+.
T Consensus 145 ----------~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (349)
T 1jmx_B 145 ----------PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS 211 (349)
T ss_dssp ----------ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEE
T ss_pred ----------cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEE
Confidence 112235555665 34 444433 38888887777666654331
Q ss_pred -------------------------------------------CCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCceee
Q 016134 276 -------------------------------------------DAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGNLE 309 (394)
Q Consensus 276 -------------------------------------------~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~~~ 309 (394)
..+..++++ +++++++ ++.|.+||+.+++.+.
T Consensus 212 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~ 289 (349)
T 1jmx_B 212 MLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK 289 (349)
T ss_dssp EEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE
T ss_pred eeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE
Confidence 122333443 5577776 8899999999887766
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS 360 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 360 (394)
.+..... .. .+.|+|+++ .|++++.++.|++||+.+++.+..+..
T Consensus 290 ~~~~~~~-~~----~~~~s~dg~-~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 290 AANLDHT-YY----CVAFDKKGD-KLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEECSSC-CC----EEEECSSSS-CEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEcCCCC-cc----ceEECCCCC-EEEEecCCCeEEEEeccccceeeeeec
Confidence 6543222 22 234699998 555578889999999999988877754
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.58 E-value=9.1e-14 Score=131.72 Aligned_cols=273 Identities=11% Similarity=-0.042 Sum_probs=164.4
Q ss_pred CcccccccccccccCCC-CCc--ccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCC
Q 016134 76 PSYNRLKNNLWVSSGSE-DRI--PHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDEC 152 (394)
Q Consensus 76 ~~~~~~~~~~~~~s~s~-d~~--~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~ 152 (394)
.+|++ ++.+|+..+. |.. +.+||++++..... ..++...+.... |+|++.+|+....+
T Consensus 41 ~~~Sp--Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~l------------t~~~~~~~~~~~-~spdg~~l~~~~~~---- 101 (388)
T 3pe7_A 41 KCFTR--DGSKLLFGGAFDGPWNYYLLDLNTQVATQL------------TEGRGDNTFGGF-LSPDDDALFYVKDG---- 101 (388)
T ss_dssp CCBCT--TSCEEEEEECTTSSCEEEEEETTTCEEEEC------------CCSSCBCSSSCE-ECTTSSEEEEEETT----
T ss_pred ccCCC--CCCEEEEEEcCCCCceEEEEeCCCCceEEe------------eeCCCCCccceE-EcCCCCEEEEEeCC----
Confidence 56787 8888998887 554 66778887764321 223333333445 99999998866543
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEE--ecCCCCEEEEEe----------------------CCCc--eeecCCCcE
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIA--LPLRSDKLFSGS----------------------RDGT--AWNIESSAE 206 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~--~s~~~~~l~sgs----------------------~Dg~--vWd~~~~~~ 206 (394)
..|++||+.++ +....+..+...+.... +++++++|+... .+.. +||+.+++.
T Consensus 102 ~~l~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATL-EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTC-CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCC-cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 48999999887 44555566666665444 489999988543 1122 588888776
Q ss_pred EEecCCCCcEEEEEEcC-CEEEEEecCCCCCCEEEEEecCCeEEEEeC------CCeEEEEeCCCCceeEEEcCCC--CC
Q 016134 207 FSLDGPVGEVYSMVVAN-EMLFAGAQDGHTRPVTCLAVGRSRLCSGSM------DNTIRVWELDTLEPVMTLNDHT--DA 277 (394)
Q Consensus 207 ~~~~~~~~~v~~l~~~~-~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~------Dg~V~iwd~~~~~~~~~~~~h~--~~ 277 (394)
..+..+...+..+.|+| + ++.|+..+. +..|.++|+..++ ...+..+. ..
T Consensus 181 ~~l~~~~~~~~~~~~sp~d--------------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~ 239 (388)
T 3pe7_A 181 TVILQENQWLGHPIYRPYD--------------------DSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGES 239 (388)
T ss_dssp EEEEEESSCEEEEEEETTE--------------------EEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEE
T ss_pred EEeecCCccccccEECCCC--------------------CCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcc
Confidence 65554444555566655 4 123333332 3478888877554 34444444 24
Q ss_pred cEEEEEc--CCEEEEEeC-CC----cEEEEEeCCCceeeEeecccCCcceEEE---EeeECCCCCcEEEEE--------e
Q 016134 278 PMSLLCW--DQFLLSCSL-DH----TIKVWFATGRGNLEAAYTHKEDNGVLAL---GGLNDPDGKPVLICA--------C 339 (394)
Q Consensus 278 v~~l~~~--~~~l~s~s~-Dg----~i~vwd~~~~~~~~~~~~~~~~~~~~~~---~~~~s~~g~~~l~sg--------s 339 (394)
+..+.|+ ++.|+..+. ++ .|.+||+.+++...... ... ...... ...|+|+|+.++++. .
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTS-MPA-CSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEE-ECC-EEEEEECTTSSEEEEEECCC------------C
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEc-CCC-ceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 6777887 665654433 22 39999998776433221 111 000000 013689998444432 4
Q ss_pred CCCeEEEEECCCCceeEEEecCC-----------cEEEEEECCCC-EEE-EEeCCCeEEEEeCCC
Q 016134 340 NDNTVHLYELPSFMERGRIFSKH-----------EVRVIEIGPDK-LFF-TGDGAGMLGVWKLLA 391 (394)
Q Consensus 340 ~dg~I~iwd~~~~~~~~~~~~~~-----------~v~~l~~sp~~-~l~-tgs~Dg~I~vWd~~~ 391 (394)
.+..|++||+.+++......+.. .+..++|+||| .|+ ++..++...||.++-
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp CCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 56799999999876543333333 47889999999 444 555678777776543
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.57 E-value=6.9e-12 Score=113.83 Aligned_cols=234 Identities=10% Similarity=0.081 Sum_probs=152.9
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEec------ccCCCeEEEEe-cCCCCEEEEEeC-C
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLE------GHEKAVSGIAL-PLRSDKLFSGSR-D 195 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~------~h~~~V~~l~~-s~~~~~l~sgs~-D 195 (394)
|+......++ +.+.+.+.++...+ +.|++||... +.+..+. +|...+.++++ .++++++++... +
T Consensus 27 g~~~~p~~v~-~~~~g~l~v~~~~~----~~i~~~d~~g--~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~ 99 (286)
T 1q7f_A 27 GQFTEPSGVA-VNAQNDIIVADTNN----HRIQIFDKEG--RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT 99 (286)
T ss_dssp TCBSCEEEEE-ECTTCCEEEEEGGG----TEEEEECTTS--CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG
T ss_pred CccCCCceEE-ECCCCCEEEEECCC----CEEEEECCCC--cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC
Confidence 4445667777 77777655544333 4899999863 3444443 35568899999 567776666643 5
Q ss_pred Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE
Q 016134 196 GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL 271 (394)
Q Consensus 196 g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 271 (394)
+. +|| .+++.+..... .+...+.+++++ ++++++...++.|.+||.. ++.+..+
T Consensus 100 ~~i~~~d-~~g~~~~~~~~--------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 157 (286)
T 1q7f_A 100 HQIQIYN-QYGQFVRKFGA--------------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF 157 (286)
T ss_dssp CEEEEEC-TTSCEEEEECT--------------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE
T ss_pred CEEEEEC-CCCcEEEEecC--------------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe
Confidence 55 477 34444321110 233456777776 5666776778999999964 5666666
Q ss_pred c--CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC-eEEE
Q 016134 272 N--DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN-TVHL 346 (394)
Q Consensus 272 ~--~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg-~I~i 346 (394)
. .+...+..++++ +.++++...++.|++||.. ++.+..+.......... .++++++|. ++++...++ .|.+
T Consensus 158 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~--~i~~d~~G~-l~v~~~~~~~~i~~ 233 (286)
T 1q7f_A 158 GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPI--GVGINSNGE-ILIADNHNNFNLTI 233 (286)
T ss_dssp ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEE--EEEECTTCC-EEEEECSSSCEEEE
T ss_pred CCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCc--EEEECCCCC-EEEEeCCCCEEEEE
Confidence 4 345568899998 5566666678999999974 44444443221112222 334689998 888777775 9999
Q ss_pred EECCCCceeEEEec---CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 347 YELPSFMERGRIFS---KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 347 wd~~~~~~~~~~~~---~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
||.. ++.+..+.. ...+.+++++|++ ++++ +.|+.|++|++...
T Consensus 234 ~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 234 FTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 9964 555555543 2247899999999 5555 67999999998653
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.56 E-value=7.3e-13 Score=125.08 Aligned_cols=239 Identities=9% Similarity=0.028 Sum_probs=148.6
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcC-CCceEEEEeccc-CCCeEEEEecCCCCE--EEEEe----------
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCG-EGLTMLAKLEGH-EKAVSGIALPLRSDK--LFSGS---------- 193 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~-~~~~~~~~l~~h-~~~V~~l~~s~~~~~--l~sgs---------- 193 (394)
.+..++ ++|++.+++....+ .|.+|++. ++ ++....... .+.+..++|+|++++ ++++.
T Consensus 41 ~~~~~a-~spdg~~l~~~~~~-----~v~~~~~~~~g-~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 41 PISWMT-FDHERKNIYGAAMK-----KWSSFAVKSPT-EIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCSEEE-ECTTSSEEEEEEBT-----EEEEEEEEETT-EEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCcEEE-ECCCCCEEEEEccc-----eEEEEEECCCC-CEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 455666 89999887655443 79999986 55 443332211 133667899999995 45553
Q ss_pred ---CCCc--eeecCC-CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEe-CCCeEEEEeCC-
Q 016134 194 ---RDGT--AWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGS-MDNTIRVWELD- 263 (394)
Q Consensus 194 ---~Dg~--vWd~~~-~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs-~Dg~V~iwd~~- 263 (394)
.++. +|++.. ++..... ..+ ...+...+.+++|+ +++|+++. .++.|++||+.
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~------~~~-----------~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~ 176 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNV------QNY-----------EYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA 176 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEE------EEE-----------ECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred eecCCceEEEEccCCCCcCcceE------eeE-----------EeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC
Confidence 4665 688863 4432110 000 00234567788887 56676665 36899999998
Q ss_pred CCcee--EEEc--CCCCCcEEEEEc--CCEEEEEeC-CCcEEEEEeC--CCcee---eEeecccCC---cce------EE
Q 016134 264 TLEPV--MTLN--DHTDAPMSLLCW--DQFLLSCSL-DHTIKVWFAT--GRGNL---EAAYTHKED---NGV------LA 322 (394)
Q Consensus 264 ~~~~~--~~~~--~h~~~v~~l~~~--~~~l~s~s~-Dg~i~vwd~~--~~~~~---~~~~~~~~~---~~~------~~ 322 (394)
+++.. ..+. .|...+..++|+ +++|++++. ++.|.+|++. +++.. ..+...... ... ..
T Consensus 177 ~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 256 (365)
T 1jof_A 177 SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYR 256 (365)
T ss_dssp TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEE
T ss_pred CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccccccc
Confidence 67643 3343 245678899998 678877775 7899999876 33332 112211111 010 23
Q ss_pred EEee-ECCCCCcEEEEEeC-CC-----eEEEEECC-CCceeEE---Ee-cCCcEEEEEECC---CC-EEEEEeC-CCeEE
Q 016134 323 LGGL-NDPDGKPVLICACN-DN-----TVHLYELP-SFMERGR---IF-SKHEVRVIEIGP---DK-LFFTGDG-AGMLG 385 (394)
Q Consensus 323 ~~~~-~s~~g~~~l~sgs~-dg-----~I~iwd~~-~~~~~~~---~~-~~~~v~~l~~sp---~~-~l~tgs~-Dg~I~ 385 (394)
..+. ++|+|+ +|+++.. +. .|.+|++. +++.... .. ....+..++|+| |+ +|++++. ++.|.
T Consensus 257 ~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 257 ADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp EEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred ccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 3456 799999 5555443 33 89999996 5554331 22 234567889999 78 8888876 48999
Q ss_pred EEeCCC
Q 016134 386 VWKLLA 391 (394)
Q Consensus 386 vWd~~~ 391 (394)
+|+++.
T Consensus 336 v~~~~~ 341 (365)
T 1jof_A 336 IYRWKD 341 (365)
T ss_dssp EEEEET
T ss_pred EEEEch
Confidence 999864
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.55 E-value=2.4e-12 Score=119.86 Aligned_cols=222 Identities=13% Similarity=0.045 Sum_probs=149.8
Q ss_pred CeEEEEEcCCCceEEEEec-ccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCc--EEEecCCCCcEEEEEEcCCEEE
Q 016134 153 RFLHSWFCGEGLTMLAKLE-GHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSA--EFSLDGPVGEVYSMVVANEMLF 227 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~--~~~~~~~~~~v~~l~~~~~~l~ 227 (394)
+.|.+||..++ +.+..+. ++-.....|+++++++++++...++.| ||.+... ...+.....
T Consensus 69 ~~i~~~d~~~g-~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~------------- 134 (329)
T 3fvz_A 69 DTILVIDPNNA-EILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ------------- 134 (329)
T ss_dssp CCEEEECTTTC-CEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-------------
T ss_pred CcEEEEECCCC-eEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-------------
Confidence 47999999877 4444443 556789999999999988888877774 7765442 222211000
Q ss_pred EEecCCCCCCEEEEEec---CCeEEEEe-CCCeEEEEeCCCCceeEEEcC----------CCCCcEEEEEc---CCEEEE
Q 016134 228 AGAQDGHTRPVTCLAVG---RSRLCSGS-MDNTIRVWELDTLEPVMTLND----------HTDAPMSLLCW---DQFLLS 290 (394)
Q Consensus 228 ~~~~~~h~~~V~~l~~~---~~~l~sgs-~Dg~V~iwd~~~~~~~~~~~~----------h~~~v~~l~~~---~~~l~s 290 (394)
.+...++......|+++ +.++++.+ .++.|++|| .+++.+..+.. +...+..++++ +.++++
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 00112455567888886 34566665 589999999 55777777642 22347889987 345666
Q ss_pred EeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECC------CCCcEEEEEeCCCeEEEEECCCCceeEEEe----c
Q 016134 291 CSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP------DGKPVLICACNDNTVHLYELPSFMERGRIF----S 360 (394)
Q Consensus 291 ~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~------~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~----~ 360 (394)
...+++|++||..+++.+..+........... ..++| ++. ++++...+..|++||+.+++.+..+. .
T Consensus 214 d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~--~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~ 290 (329)
T 3fvz_A 214 DRENGRIQCFKTDTKEFVREIKHASFGRNVFA--ISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH 290 (329)
T ss_dssp ETTTTEEEEEETTTCCEEEEECCTTTTTCEEE--EEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCEEEEECCSSSC
T ss_pred ECCCCEEEEEECCCCcEEEEEeccccCCCcce--eeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeEEEEEcCCCCc
Confidence 66788999999987777766644332223333 34567 232 22223345589999999998888774 2
Q ss_pred CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 361 KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 361 ~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
...+..|+++|+| ++++...++.|++|++..+
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 4458999999999 8888889999999998654
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.55 E-value=2e-13 Score=141.09 Aligned_cols=297 Identities=9% Similarity=0.006 Sum_probs=177.4
Q ss_pred CCCCcccccccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCc-----cceeeeccccccccccCCCee
Q 016134 73 KSPPSYNRLKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDK-----STSKKTTLKNVCCHWLLGNCV 147 (394)
Q Consensus 73 ~~~~~~~~~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~-----~~v~~~~~~~~~~~~~~~~~~ 147 (394)
....+|++ ++..++++ |++|++||+.++.... ...++. .....+. ++|++.+|+....
T Consensus 19 ~~~~~w~~--dg~~~~~~--~~~i~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-~Spdg~~l~~~~~ 81 (740)
T 4a5s_A 19 LYSLRWIS--DHEYLYKQ--ENNILVFNAEYGNSSV------------FLENSTFDEFGHSINDYS-ISPDGQFILLEYN 81 (740)
T ss_dssp CCCEEECS--SSEEEEEE--TTEEEEEETTTCCEEE------------EECTTTTTTCCSCCCEEE-ECTTSSEEEEEEE
T ss_pred ccccEECC--CCcEEEEc--CCcEEEEECCCCceEE------------EEechhhhhhcccccceE-ECCCCCEEEEEEC
Confidence 44667877 77777774 8999999999887421 111111 1122355 8999999987766
Q ss_pred cCCC-----CCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEec--CCCCcE--
Q 016134 148 RGDE-----CRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLD--GPVGEV-- 216 (394)
Q Consensus 148 ~g~~-----~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~--~~~~~v-- 216 (394)
+... .+.+.+||+.++ + ...+..|...+...+|||||+.||.+.. +. +|++.+++...+. +....+
T Consensus 82 ~~~~~r~~~~~~~~~~d~~~~-~-~~~l~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~~~~~~lt~~g~~~~~~~ 158 (740)
T 4a5s_A 82 YVKQWRHSYTASYDIYDLNKR-Q-LITEERIPNNTQWVTWSPVGHKLAYVWN-NDIYVKIEPNLPSYRITWTGKEDIIYN 158 (740)
T ss_dssp EEECSSSCEEEEEEEEETTTT-E-ECCSSCCCTTEEEEEECSSTTCEEEEET-TEEEEESSTTSCCEECCSCCBTTTEEE
T ss_pred CeeeEEEccceEEEEEECCCC-c-EEEcccCCCcceeeEECCCCCEEEEEEC-CeEEEEECCCCceEEEcCCCCccceec
Confidence 4322 247889999887 4 3457788889999999999999999864 45 6898888766543 222222
Q ss_pred ---------------EEEEEcCC--EEEEEecCCCCCCEEEEEec-CC-----eE------EEEeC--CCeEEEEeCCC-
Q 016134 217 ---------------YSMVVANE--MLFAGAQDGHTRPVTCLAVG-RS-----RL------CSGSM--DNTIRVWELDT- 264 (394)
Q Consensus 217 ---------------~~l~~~~~--~l~~~~~~~h~~~V~~l~~~-~~-----~l------~sgs~--Dg~V~iwd~~~- 264 (394)
..+.|+|| .|+....+...-.+..+.+. .. .. ..|.. +.+|++||+.+
T Consensus 159 g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~ 238 (740)
T 4a5s_A 159 GITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSL 238 (740)
T ss_dssp SBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSC
T ss_pred CcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCC
Confidence 24889998 67766655433333333321 00 00 01111 22689999998
Q ss_pred --Cc--eeEEEc------CCCCCcEEEEEc--CCEEEEEeC----CCcEEEEEeCCCc----ee--eEe--ecccCCcce
Q 016134 265 --LE--PVMTLN------DHTDAPMSLLCW--DQFLLSCSL----DHTIKVWFATGRG----NL--EAA--YTHKEDNGV 320 (394)
Q Consensus 265 --~~--~~~~~~------~h~~~v~~l~~~--~~~l~s~s~----Dg~i~vwd~~~~~----~~--~~~--~~~~~~~~~ 320 (394)
++ ....+. +|...+..+.|+ ++.++.... +..|++||+.+++ +. ..+ ..+......
T Consensus 239 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~ 318 (740)
T 4a5s_A 239 SSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR 318 (740)
T ss_dssp CSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSS
T ss_pred CCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEcc
Confidence 73 233444 377788999998 565554432 3479999998876 22 111 112211110
Q ss_pred -EEEEeeECCCCCcEEEEEeC-C--CeEEEEECCCCceeEEEecCCcEEEEE-ECCCC-EEEEEeC----CCeEEEEeCC
Q 016134 321 -LALGGLNDPDGKPVLICACN-D--NTVHLYELPSFMERGRIFSKHEVRVIE-IGPDK-LFFTGDG----AGMLGVWKLL 390 (394)
Q Consensus 321 -~~~~~~~s~~g~~~l~sgs~-d--g~I~iwd~~~~~~~~~~~~~~~v~~l~-~sp~~-~l~tgs~----Dg~I~vWd~~ 390 (394)
......|+|||+.+++..+. + ..|++||+..+...........|..+. ++ ++ +++++.. .+...||.++
T Consensus 319 ~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~~~d-~~~i~f~~~~~~~~~~~~~ly~v~ 397 (740)
T 4a5s_A 319 FRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALT-SDYLYYISNEYKGMPGGRNLYKIQ 397 (740)
T ss_dssp SSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSCEEEEEEEC-SSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEEEEEEEEEe-CCEEEEEEecCCCCCceeEEEEEE
Confidence 01123479999944425543 3 468888888765443333344566554 44 33 5555554 3445555543
No 164
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.54 E-value=3.7e-12 Score=119.63 Aligned_cols=261 Identities=8% Similarity=0.077 Sum_probs=160.3
Q ss_pred CCCCcccccccCC--CCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC--C-ce
Q 016134 91 SEDRIPHVRNREN--PGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE--G-LT 165 (394)
Q Consensus 91 s~d~~~~~w~~~~--~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~--~-~~ 165 (394)
+.++.+.+|.++. +.+.... .. +......++ ++|++.+++....++...+.|.+|++.. + .+
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~----------~~--~~~~p~~l~-~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLS----------DA--EVANPSYLI-PSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEE----------EE--ECSCCCSEE-ECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEee----------cc--cCCCCceEE-ECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 4578899997753 4432111 01 233455566 9999999887777655567999998854 3 23
Q ss_pred EEEEecccCCCeEEEEecCCCCEEEEEeC-CCc--eeecCCCcEEE-------ecC--------CCCcEEEEEEcCC--E
Q 016134 166 MLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGT--AWNIESSAEFS-------LDG--------PVGEVYSMVVANE--M 225 (394)
Q Consensus 166 ~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~--vWd~~~~~~~~-------~~~--------~~~~v~~l~~~~~--~ 225 (394)
.+.....+......+++ ++++|++++. ++. +|++.....+. ..+ ....+..++|+|+ .
T Consensus 91 ~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 44555556677888888 8888887774 555 69987543221 111 1234578999987 4
Q ss_pred EEEEecC----------CC----------------------CCCEEEEEec--CCeEEEEe-CCCeEEEEeCCCCce--e
Q 016134 226 LFAGAQD----------GH----------------------TRPVTCLAVG--RSRLCSGS-MDNTIRVWELDTLEP--V 268 (394)
Q Consensus 226 l~~~~~~----------~h----------------------~~~V~~l~~~--~~~l~sgs-~Dg~V~iwd~~~~~~--~ 268 (394)
++++... .. ...+..++|+ ++++++++ .++.|.+||+++++. +
T Consensus 169 l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 169 LLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred EEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 5554432 11 1235567887 56676666 689999999987654 3
Q ss_pred EEEc---CCCCCcEEEEEc--CCEEEEEeCC--CcEEEEEeC--CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEe
Q 016134 269 MTLN---DHTDAPMSLLCW--DQFLLSCSLD--HTIKVWFAT--GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC 339 (394)
Q Consensus 269 ~~~~---~h~~~v~~l~~~--~~~l~s~s~D--g~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs 339 (394)
..+. .+...+..++|+ +++|+++..+ +.|.+|++. +++ +..+.......... .+.|+|+|+ +|++++
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~g~~~~--~~~~spdg~-~l~~~~ 324 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLTGIHPR--NFIITPNGK-YLLVAC 324 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEECSSCCC--EEEECTTSC-EEEEEE
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecCCCCCc--eEEECCCCC-EEEEEE
Confidence 3332 233456788998 7778666654 899999996 233 22221111111222 234699999 555555
Q ss_pred -CCCeEEEEEC--CCCceeEEEe--cCCcEEEEEEC
Q 016134 340 -NDNTVHLYEL--PSFMERGRIF--SKHEVRVIEIG 370 (394)
Q Consensus 340 -~dg~I~iwd~--~~~~~~~~~~--~~~~v~~l~~s 370 (394)
.++.|.+|++ .+++...... ....+.||.|.
T Consensus 325 ~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 325 RDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 7899999655 4555433221 13468888885
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=3.4e-14 Score=146.16 Aligned_cols=227 Identities=12% Similarity=0.037 Sum_probs=143.9
Q ss_pred ccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCC---CeEEEEecCCCCEEEEEeC---------CCc--eee
Q 016134 135 KNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEK---AVSGIALPLRSDKLFSGSR---------DGT--AWN 200 (394)
Q Consensus 135 ~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~sgs~---------Dg~--vWd 200 (394)
|+|++.++++. .++.|++||+.++ +....+.+|.. .|.+++|+|||++|++++. ++. +||
T Consensus 23 ~s~dg~~~~~~-----~d~~i~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 23 WISGQEYLHQS-----ADNNIVLYNIETG-QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp ESSSSEEEEEC-----TTSCEEEEESSSC-CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ECCCCeEEEEc-----CCCCEEEEEcCCC-cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 88888766543 2569999999887 55666666654 4999999999999998886 455 699
Q ss_pred cCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEE-cCCCCC
Q 016134 201 IESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTL-NDHTDA 277 (394)
Q Consensus 201 ~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~h~~~ 277 (394)
+++++.+..... ...+..++|+ ++.|+.+. |+.|++||+.++++.+.. .++...
T Consensus 97 ~~~g~~~~~~~l----------------------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~ 153 (719)
T 1z68_A 97 LSNGEFVRGNEL----------------------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENK 153 (719)
T ss_dssp TTTTEECCSSCC----------------------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred CCCCccccceec----------------------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC
Confidence 988876210111 1234455665 56777775 789999999888765432 222222
Q ss_pred c-----------------EEEEEc--CCEEEEEeCCC----------------------------------cEEEEEeCC
Q 016134 278 P-----------------MSLLCW--DQFLLSCSLDH----------------------------------TIKVWFATG 304 (394)
Q Consensus 278 v-----------------~~l~~~--~~~l~s~s~Dg----------------------------------~i~vwd~~~ 304 (394)
| .++.|+ |++|++++.|. .|++||+.+
T Consensus 154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~ 233 (719)
T 1z68_A 154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY 233 (719)
T ss_dssp EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC
T ss_pred eEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC
Confidence 2 478888 78999887652 788999987
Q ss_pred Ccee--eEeec-c-cCCcceEEEEeeECCCCCcEEEEEeCC----CeEEEEE----CCCCceeEEE-----ecCCcEE--
Q 016134 305 RGNL--EAAYT-H-KEDNGVLALGGLNDPDGKPVLICACND----NTVHLYE----LPSFMERGRI-----FSKHEVR-- 365 (394)
Q Consensus 305 ~~~~--~~~~~-~-~~~~~~~~~~~~~s~~g~~~l~sgs~d----g~I~iwd----~~~~~~~~~~-----~~~~~v~-- 365 (394)
++.. ..+.. . ..........+.|+||++ ++++.... ..|.+|| +.+++....+ .+...+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (719)
T 1z68_A 234 PAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGF 312 (719)
T ss_dssp HHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSS
T ss_pred CCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccc
Confidence 6542 11110 0 001122233456899976 77664322 2488899 7766544332 2234455
Q ss_pred ---EEEECCCC-EEE--EEeCCC--eEEEEeCCC
Q 016134 366 ---VIEIGPDK-LFF--TGDGAG--MLGVWKLLA 391 (394)
Q Consensus 366 ---~l~~sp~~-~l~--tgs~Dg--~I~vWd~~~ 391 (394)
.++|+||| .|+ +...++ .|.+|++..
T Consensus 313 ~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 313 FVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp SCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred cCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 78999999 333 455666 466666544
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.51 E-value=3.3e-13 Score=139.54 Aligned_cols=230 Identities=9% Similarity=-0.021 Sum_probs=144.9
Q ss_pred eeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCC-----eEEEEecCCCCEEEEEeCCCc--------
Q 016134 131 KTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKA-----VSGIALPLRSDKLFSGSRDGT-------- 197 (394)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~-----V~~l~~s~~~~~l~sgs~Dg~-------- 197 (394)
.+. |+|++.++++. ++.|++||+.++ +....+.+|... ..+++|+|||++|+.++.+..
T Consensus 21 ~~~-w~~dg~~~~~~------~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 21 SLR-WISDHEYLYKQ------ENNILVFNAEYG-NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CEE-ECSSSEEEEEE------TTEEEEEETTTC-CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccE-ECCCCcEEEEc------CCcEEEEECCCC-ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 455 99999888764 459999999888 556677777643 345789999999999988643
Q ss_pred ---eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEE-E
Q 016134 198 ---AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMT-L 271 (394)
Q Consensus 198 ---vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~-~ 271 (394)
+||+++++...+..+. ..+...+|+ ++.|+.+ .|+.|++||+.+++..+. .
T Consensus 93 ~~~~~d~~~~~~~~l~~~~----------------------~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIP----------------------NNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITW 149 (740)
T ss_dssp EEEEEETTTTEECCSSCCC----------------------TTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCS
T ss_pred EEEEEECCCCcEEEcccCC----------------------CcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcC
Confidence 7899988876554443 345555555 5667766 468999999988775442 1
Q ss_pred cCCCCCc-----------------EEEEEc--CCEEEEEeCCC------------------------------------c
Q 016134 272 NDHTDAP-----------------MSLLCW--DQFLLSCSLDH------------------------------------T 296 (394)
Q Consensus 272 ~~h~~~v-----------------~~l~~~--~~~l~s~s~Dg------------------------------------~ 296 (394)
.++...+ ..+.|+ |+.|+..+.|. +
T Consensus 150 ~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~ 229 (740)
T 4a5s_A 150 TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK 229 (740)
T ss_dssp CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE
T ss_pred CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE
Confidence 2222222 246777 78888775332 4
Q ss_pred EEEEEeCC---Cc--eeeEeecccC--CcceEEEEeeECCCCCcEEEEEe----CCCeEEEEECCCCc----e--eEEE-
Q 016134 297 IKVWFATG---RG--NLEAAYTHKE--DNGVLALGGLNDPDGKPVLICAC----NDNTVHLYELPSFM----E--RGRI- 358 (394)
Q Consensus 297 i~vwd~~~---~~--~~~~~~~~~~--~~~~~~~~~~~s~~g~~~l~sgs----~dg~I~iwd~~~~~----~--~~~~- 358 (394)
|++||+.+ ++ ....+..... ........+.|+|||+ +++... .+..|++||+.+++ + ...+
T Consensus 230 l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 230 FFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp EEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred EEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 77788776 52 1222221000 0122233456899998 555442 23479999999876 1 1111
Q ss_pred --ecCCcE-----EEEEECCCC-EEE-EEe-CCC--eEEEEeCCCC
Q 016134 359 --FSKHEV-----RVIEIGPDK-LFF-TGD-GAG--MLGVWKLLAK 392 (394)
Q Consensus 359 --~~~~~v-----~~l~~sp~~-~l~-tgs-~Dg--~I~vWd~~~~ 392 (394)
.+...| ..++|+||| .|+ ..+ .+| .|.+|++..+
T Consensus 309 ~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 309 EMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS
T ss_pred eccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC
Confidence 123333 378899999 554 554 444 5777777643
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.50 E-value=3.7e-12 Score=120.28 Aligned_cols=220 Identities=10% Similarity=0.037 Sum_probs=132.6
Q ss_pred cCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----------CCc--eeecCCCcEEE-ecCCCC
Q 016134 148 RGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----------DGT--AWNIESSAEFS-LDGPVG 214 (394)
Q Consensus 148 ~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----------Dg~--vWd~~~~~~~~-~~~~~~ 214 (394)
+...++.|.+||..++ +.+.++..+..+ .++|+||+++|+++.. ++. +||..+.+.+. +.....
T Consensus 26 ~~~~d~~v~v~D~~t~-~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~ 102 (361)
T 2oiz_A 26 MHLTESRVHVYDYTNG-KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK 102 (361)
T ss_dssp GGGGGCEEEEEETTTC-CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT
T ss_pred CccccCeEEEEECCCC-eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc
Confidence 3344669999999887 667777777666 8999999999999873 333 69998877652 211100
Q ss_pred cEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeC--CCeEEEEeCCCCceeEE-EcCCCCCcEEEEEc---CC
Q 016134 215 EVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSM--DNTIRVWELDTLEPVMT-LNDHTDAPMSLLCW---DQ 286 (394)
Q Consensus 215 ~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~--Dg~V~iwd~~~~~~~~~-~~~h~~~v~~l~~~---~~ 286 (394)
.. .+......++++ +++|+++.. +++|.+||+++++.+.+ +... . ...+.+. ..
T Consensus 103 ~~----------------~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~ 164 (361)
T 2oiz_A 103 RV----------------QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPR 164 (361)
T ss_dssp BC----------------CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTTSSS
T ss_pred cc----------------ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCCCCe
Confidence 00 011223334554 566666653 46788888877776666 4321 1 1111112 13
Q ss_pred EEEEEeCCCcEEEEEeCC-Ccee-------------------------------------------------eEeeccc-
Q 016134 287 FLLSCSLDHTIKVWFATG-RGNL-------------------------------------------------EAAYTHK- 315 (394)
Q Consensus 287 ~l~s~s~Dg~i~vwd~~~-~~~~-------------------------------------------------~~~~~~~- 315 (394)
.+++.+.|+++.+|++.. ++.. ..+....
T Consensus 165 ~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 165 SFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp EEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred eEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCc
Confidence 444445555555555432 1111 0000000
Q ss_pred -------CCcceEEEEeeECCCCCcEEEEEe----------CCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEE
Q 016134 316 -------EDNGVLALGGLNDPDGKPVLICAC----------NDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 316 -------~~~~~~~~~~~~s~~g~~~l~sgs----------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~t 377 (394)
.+.... ...++|+++.++++.. ..+.|.+||+.+++.+..+.... +.+++|+||+ +|++
T Consensus 245 ~~~~~~~~p~g~~--~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v 321 (361)
T 2oiz_A 245 EDKAKNWVPGGYN--LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLT 321 (361)
T ss_dssp HHHHTTCEECCSS--CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEE
T ss_pred cccccccccCCee--EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEE
Confidence 000000 0245888885555544 13589999999999999988766 9999999999 8887
Q ss_pred EeCCCeEEEEeCCCC
Q 016134 378 GDGAGMLGVWKLLAK 392 (394)
Q Consensus 378 gs~Dg~I~vWd~~~~ 392 (394)
++. +.|.+||+.+.
T Consensus 322 ~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 322 LDG-GNVNVYDISQP 335 (361)
T ss_dssp ECS-SCEEEEECSSS
T ss_pred eCC-CeEEEEECCCC
Confidence 776 99999998764
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.48 E-value=1e-11 Score=117.11 Aligned_cols=213 Identities=8% Similarity=0.044 Sum_probs=129.7
Q ss_pred eEEEEEc--CCCc-eEEEEec-ccCCCeEEEEecCCCCEEEEEeCCCc--eeecC-CCcEEEecCCCCcEEEEEEcCCEE
Q 016134 154 FLHSWFC--GEGL-TMLAKLE-GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIE-SSAEFSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 154 ~i~iWd~--~~~~-~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~-~~~~~~~~~~~~~v~~l~~~~~~l 226 (394)
.|.+|++ .++. +.+.... ++...+..++|+|++++|++++.+ . +|++. +++...+..+.
T Consensus 15 ~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~------------- 80 (365)
T 1jof_A 15 AIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP------------- 80 (365)
T ss_dssp EEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE-------------
T ss_pred cEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee-------------
Confidence 5666654 4441 2222221 344578899999999999999888 5 69986 66543221100
Q ss_pred EEEecCCCCCCEEEEEec--CC--eEEEEe-------------CCCeEEEEeCC-CCceeEEEc----CCCCCcEEEEEc
Q 016134 227 FAGAQDGHTRPVTCLAVG--RS--RLCSGS-------------MDNTIRVWELD-TLEPVMTLN----DHTDAPMSLLCW 284 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~--~~--~l~sgs-------------~Dg~V~iwd~~-~~~~~~~~~----~h~~~v~~l~~~ 284 (394)
.+ ..+..++|+ ++ +++++. .++++.+|++. .++....+. .+...+.+++|+
T Consensus 81 ------~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~s 153 (365)
T 1jof_A 81 ------IG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFD 153 (365)
T ss_dssp ------CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEEC
T ss_pred ------cC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEEC
Confidence 00 012224444 33 233442 68999999997 466544443 245678999998
Q ss_pred --CCEEEEEeC-CCcEEEEEeC-CCceeeE--eecccCCcceEEEEeeECCCCCcEEEEEe-CCCeEEEEECC--CCcee
Q 016134 285 --DQFLLSCSL-DHTIKVWFAT-GRGNLEA--AYTHKEDNGVLALGGLNDPDGKPVLICAC-NDNTVHLYELP--SFMER 355 (394)
Q Consensus 285 --~~~l~s~s~-Dg~i~vwd~~-~~~~~~~--~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-~dg~I~iwd~~--~~~~~ 355 (394)
+++|+++.. ++.|++||+. +++.... +.......... .+.|+|+|+ +|++++ .++.|.+|++. +++..
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~--~~~~spdg~-~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR--WVAMHPTGN-YLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE--EEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC--EeEECCCCC-EEEEEECCCCeEEEEEEeCCCCcEE
Confidence 677777664 6899999998 5543221 11111112222 335799999 555554 57899999875 45442
Q ss_pred ---EEEec--C-----C-------cEEEEE-ECCCC-EEEEEeCC-C-----eEEEEeCC
Q 016134 356 ---GRIFS--K-----H-------EVRVIE-IGPDK-LFFTGDGA-G-----MLGVWKLL 390 (394)
Q Consensus 356 ---~~~~~--~-----~-------~v~~l~-~sp~~-~l~tgs~D-g-----~I~vWd~~ 390 (394)
..+.. . . .+..++ |+||| +|+++..+ . .|.+|++.
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 12221 1 1 488999 99999 66665532 2 89999986
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.47 E-value=4.8e-13 Score=126.77 Aligned_cols=268 Identities=8% Similarity=-0.093 Sum_probs=154.4
Q ss_pred CCCcccccccccccccCCC---CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCC
Q 016134 74 SPPSYNRLKNNLWVSSGSE---DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGD 150 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~s~s~---d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~ 150 (394)
...+|++ ++.+|+..+. +..+.+|+++++..... ..+......... |+|++.+|+.....+
T Consensus 39 ~~~~~Sp--dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l------------~~~~~~~~~~~~-~spdg~~l~~~~~~~- 102 (396)
T 3c5m_A 39 YQKCFTQ--DGKKLLFAGDFDGNRNYYLLNLETQQAVQL------------TEGKGDNTFGGF-ISTDERAFFYVKNEL- 102 (396)
T ss_dssp TSCCBCT--TSCEEEEEECTTSSCEEEEEETTTTEEEEC------------CCSSCBCTTTCE-ECTTSSEEEEEETTT-
T ss_pred ecCcCCC--CCCEEEEEEecCCCceEEEEECCCCcEEEe------------ecCCCCccccce-ECCCCCEEEEEEcCC-
Confidence 4456776 7777775533 34677788887664321 111111122234 899999887655444
Q ss_pred CCCeEEEEEcCCCceEEEEecccCCCeEE-------------------EEecCCCCEEEEEe-----CCCc--eeecCCC
Q 016134 151 ECRFLHSWFCGEGLTMLAKLEGHEKAVSG-------------------IALPLRSDKLFSGS-----RDGT--AWNIESS 204 (394)
Q Consensus 151 ~~~~i~iWd~~~~~~~~~~l~~h~~~V~~-------------------l~~s~~~~~l~sgs-----~Dg~--vWd~~~~ 204 (394)
.|++||+.++ +.......+...... +.|+|+++.++... .+.. +||+.++
T Consensus 103 ---~l~~~d~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g 178 (396)
T 3c5m_A 103 ---NLMKVDLETL-EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETG 178 (396)
T ss_dssp ---EEEEEETTTC-CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTC
T ss_pred ---cEEEEECCCC-CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCC
Confidence 7999999876 444444444443333 34567776665443 2223 5788777
Q ss_pred cEEEecCCCCcEEEEEEcC-CEEEEEecCCCCCCEEEEEecCCeEEEEeCC------CeEEEEeCCCCceeEEEcCCC--
Q 016134 205 AEFSLDGPVGEVYSMVVAN-EMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD------NTIRVWELDTLEPVMTLNDHT-- 275 (394)
Q Consensus 205 ~~~~~~~~~~~v~~l~~~~-~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D------g~V~iwd~~~~~~~~~~~~h~-- 275 (394)
+...+..+...+..+.|+| + +..|+..+.+ ..|.+||+.+++. ..+..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~sp~d--------------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~ 237 (396)
T 3c5m_A 179 ELEVIHQDTAWLGHPIYRPFD--------------------DSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEG 237 (396)
T ss_dssp CEEEEEEESSCEEEEEEETTE--------------------EEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTT
T ss_pred cEEeeccCCcccccceECCCC--------------------CCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCCC
Confidence 7654443334444444444 2 1223333322 4688899876543 3333332
Q ss_pred CCcEEEEEc--CCEEEEEeCC-----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECC-CCCcEEEEEe--------
Q 016134 276 DAPMSLLCW--DQFLLSCSLD-----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP-DGKPVLICAC-------- 339 (394)
Q Consensus 276 ~~v~~l~~~--~~~l~s~s~D-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs-------- 339 (394)
..+..+.|+ ++.|+..+.+ +.|.+||+.+++...... ... . . ..|+| +|+ +|+.++
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~---~--~~~s~~dg~-~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-C---S--HLMSNFDGS-LMVGDGCDAPVDVA 309 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-E---E--EEEECSSSS-EEEEEECCC-----
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-C---C--CCccCCCCc-eEEEecCCcceeec
Confidence 246777887 6666666543 449999998765433221 111 1 1 34688 998 666544
Q ss_pred --------CCCeEEEEECCCCceeEEEecCC-----------cEEEEEECCCC-EEEEEe-CCCeEEEEeCC
Q 016134 340 --------NDNTVHLYELPSFMERGRIFSKH-----------EVRVIEIGPDK-LFFTGD-GAGMLGVWKLL 390 (394)
Q Consensus 340 --------~dg~I~iwd~~~~~~~~~~~~~~-----------~v~~l~~sp~~-~l~tgs-~Dg~I~vWd~~ 390 (394)
.+..|++||+.+++......+.. .+..++|+|++ .|+..+ .++...||.++
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp -----CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 34789999998876543222222 25678999999 555554 46666666544
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.47 E-value=2.5e-12 Score=130.89 Aligned_cols=225 Identities=8% Similarity=-0.080 Sum_probs=137.9
Q ss_pred cccccc-cCCCeecCCCCCeEEEEEcC--C-CceEEEEecc-----cCCCeEEEEecCCCCEEEEEeCC----------C
Q 016134 136 NVCCHW-LLGNCVRGDECRFLHSWFCG--E-GLTMLAKLEG-----HEKAVSGIALPLRSDKLFSGSRD----------G 196 (394)
Q Consensus 136 ~~~~~~-~~~~~~~g~~~~~i~iWd~~--~-~~~~~~~l~~-----h~~~V~~l~~s~~~~~l~sgs~D----------g 196 (394)
+|++.+ |+... +.+..|.+|+.. . + + ...+.. |...+..++|+|||+.|+.++.| .
T Consensus 87 SPDg~~~la~~~---~~~~~l~~~~~~~~g~~-~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 87 RPAGGPLLVFTH---FGDQRLYAFEPDAPGGA-V-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp CSSSSCEEEEEB---TTTCCEEEECTTSTTCC-C-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred ecCCCeEEEEEE---CCCCeEEEEcCCCCCCC-C-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 388888 66322 224567777775 2 3 2 344555 67789999999999999998876 2
Q ss_pred c--eeecCC------CcEEEec-CCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCC--------CeEEE
Q 016134 197 T--AWNIES------SAEFSLD-GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD--------NTIRV 259 (394)
Q Consensus 197 ~--vWd~~~------~~~~~~~-~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D--------g~V~i 259 (394)
. +||+.+ ++...+. .+...+..++|+|| +++|+.++.+ ..|++
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpD--------------------G~~la~~~~~~~~~~~~~~~i~~ 221 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPD--------------------GRQAVWLAWDHPRMPWEGTELKT 221 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTT--------------------SSEEEEEEECTTCCTTTCEEEEE
T ss_pred EEEEEECCCCccccCCceeEEEecCCCcccCceECCC--------------------CCEEEEEECCCCCCCCCCcEEEE
Confidence 2 588887 5555544 33333333333333 5566665544 37999
Q ss_pred EeCC-CC---ceeEEEcCCCCCcEEEEEc--CCEEEEEeCCC--cEEEEEeCCCceeeEeecccCCcceE-----EEEee
Q 016134 260 WELD-TL---EPVMTLNDHTDAPMSLLCW--DQFLLSCSLDH--TIKVWFATGRGNLEAAYTHKEDNGVL-----ALGGL 326 (394)
Q Consensus 260 wd~~-~~---~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg--~i~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~ 326 (394)
||+. ++ +.......|...+..+.|+ +++++++..++ .|.+||+.+++... +.......... ...+.
T Consensus 222 ~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~~~~~p~w~~~~~~~~ 300 (662)
T 3azo_A 222 ARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ-LCRREEEFAGPLWTPGMRWFA 300 (662)
T ss_dssp EEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE-SSCCSSBSSCCCCSTTCCSEE
T ss_pred EEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee-cccccccccCccccccCceEe
Confidence 9998 56 4444444567889999998 67778888888 55555654544332 22222111000 01234
Q ss_pred ECCCCCcEEEEEeCCCeEEEE--ECCCCceeEEEec-CCcEEEE-EECCCC-EEEEEeCCCeEEEEeC
Q 016134 327 NDPDGKPVLICACNDNTVHLY--ELPSFMERGRIFS-KHEVRVI-EIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 327 ~s~~g~~~l~sgs~dg~I~iw--d~~~~~~~~~~~~-~~~v~~l-~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
+++++. +++++.. +.++|| |+.+++ +..+.. ...+..+ +++++. .+++++.+....+|.+
T Consensus 301 ~~~~~~-~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 301 PLANGL-IAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp ECTTSC-EEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred EeCCCE-EEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEE
Confidence 578888 8888888 999999 555554 444433 4457766 665555 5556666655555543
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.44 E-value=6.7e-11 Score=111.58 Aligned_cols=257 Identities=9% Similarity=-0.006 Sum_probs=161.4
Q ss_pred CCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCee------cCCCCCeEEEEEcCCCc
Q 016134 91 SEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCV------RGDECRFLHSWFCGEGL 164 (394)
Q Consensus 91 s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~------~g~~~~~i~iWd~~~~~ 164 (394)
..|+++.+||.+++..... ...| ... .++ ++|++.++..... .|+.+++|.+||..+.
T Consensus 28 ~~d~~v~v~D~~t~~~~~~-----------i~~g-~~p--~i~-~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~- 91 (361)
T 2oiz_A 28 LTESRVHVYDYTNGKFLGM-----------VPTA-FNG--HVQ-VSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL- 91 (361)
T ss_dssp GGGCEEEEEETTTCCEEEE-----------EECC-EEE--EEE-ECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-
T ss_pred cccCeEEEEECCCCeEEEE-----------ecCC-CCC--ceE-ECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-
Confidence 3478999999988775421 1112 222 566 9999988876553 2445668999999876
Q ss_pred eEEEEeccc------CCCeEEEEecCCCCEEEEEeCC--Cc--eeecCCCcEEEe-cCCCCc----------EEEEEEcC
Q 016134 165 TMLAKLEGH------EKAVSGIALPLRSDKLFSGSRD--GT--AWNIESSAEFSL-DGPVGE----------VYSMVVAN 223 (394)
Q Consensus 165 ~~~~~l~~h------~~~V~~l~~s~~~~~l~sgs~D--g~--vWd~~~~~~~~~-~~~~~~----------v~~l~~~~ 223 (394)
+.+.++... ......++|+|||++|+++..+ +. +||+++++.+.. ....+. -.-+.+++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEET
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECC
Confidence 566665432 3456789999999999998753 44 699999887643 222111 11122333
Q ss_pred C--EEEEEecCCCCCCEEE-E-----------------EecCCeEEEEeCCCeEEEEeCCCCce--eEEEcCCC------
Q 016134 224 E--MLFAGAQDGHTRPVTC-L-----------------AVGRSRLCSGSMDNTIRVWELDTLEP--VMTLNDHT------ 275 (394)
Q Consensus 224 ~--~l~~~~~~~h~~~V~~-l-----------------~~~~~~l~sgs~Dg~V~iwd~~~~~~--~~~~~~h~------ 275 (394)
+ .++..... ...+.. . .-.+..++..+.++.|.++|+...+. +..+....
T Consensus 172 dg~~~~v~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
T 2oiz_A 172 DGGLLTINLGE--DGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAK 249 (361)
T ss_dssp TSSEEEEEECT--TSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHT
T ss_pred CCcEEEEEECC--CCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccc
Confidence 3 11111111 011110 0 01134566667889999999875432 22222110
Q ss_pred ----CCcEEEEEc--CCEEEEEeC-----------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEE
Q 016134 276 ----DAPMSLLCW--DQFLLSCSL-----------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICA 338 (394)
Q Consensus 276 ----~~v~~l~~~--~~~l~s~s~-----------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sg 338 (394)
.....++++ ++.++++.. .+.|.+||+.+.+.+..+..+. ...+ .++|+|+ +|+++
T Consensus 250 ~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~i----a~spdg~-~l~v~ 322 (361)
T 2oiz_A 250 NWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSM----TIDQQRN-LMLTL 322 (361)
T ss_dssp TCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEE----EEETTTT-EEEEE
T ss_pred ccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEE----EECCCCC-EEEEe
Confidence 111124555 566665543 3489999999998888776654 2323 4699999 77777
Q ss_pred eCCCeEEEEECCCC--ceeEEEe-cCCcEEEEEECCCC
Q 016134 339 CNDNTVHLYELPSF--MERGRIF-SKHEVRVIEIGPDK 373 (394)
Q Consensus 339 s~dg~I~iwd~~~~--~~~~~~~-~~~~v~~l~~sp~~ 373 (394)
+. ++|.+||..++ +.+..+. .......++++|+|
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred CC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 76 99999999999 8888874 46678899999987
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.43 E-value=9.8e-12 Score=115.86 Aligned_cols=243 Identities=10% Similarity=0.017 Sum_probs=145.3
Q ss_pred CCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecC-CCCCeEEEEEcCCCceEEEEe
Q 016134 92 EDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRG-DECRFLHSWFCGEGLTMLAKL 170 (394)
Q Consensus 92 ~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g-~~~~~i~iWd~~~~~~~~~~l 170 (394)
.+..+.+||++++.... . ..+..+. |+|++.+++.....+ +....|.+|++.++ +.....
T Consensus 41 ~~~~l~~~d~~~~~~~~-------------l----~~~~~~~-~SpDg~~la~~~~~~~~~~~~l~~~~~~~g-~~~~l~ 101 (347)
T 2gop_A 41 YENTIVIENLKNNARRF-------------I----ENATMPR-ISPDGKKIAFMRANEEKKVSEIWVADLETL-SSKKIL 101 (347)
T ss_dssp EEEEEEEEETTTCCEEE-------------E----ESCEEEE-ECTTSSEEEEEEEETTTTEEEEEEEETTTT-EEEEEE
T ss_pred ccceEEEEeCCCCceEE-------------c----ccCCCeE-ECCCCCEEEEEEeccCCCcceEEEEECCCC-ceEEEE
Confidence 36778888888765321 1 2455666 999999998766543 23345888888776 444443
Q ss_pred cccCCCeEEEEecCCCCEEEEEeCC------------------C---------c--eeecCCCcE-EEecCCCCcEEEEE
Q 016134 171 EGHEKAVSGIALPLRSDKLFSGSRD------------------G---------T--AWNIESSAE-FSLDGPVGEVYSMV 220 (394)
Q Consensus 171 ~~h~~~V~~l~~s~~~~~l~sgs~D------------------g---------~--vWd~~~~~~-~~~~~~~~~v~~l~ 220 (394)
..+ . +..++|+||++.|+.++.+ + . +||+.+++. ..+.. . .+..+.
T Consensus 102 ~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~ 177 (347)
T 2gop_A 102 EAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGI 177 (347)
T ss_dssp EES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEE
T ss_pred cCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Cccccc
Confidence 333 3 9999999999999988743 1 1 477766665 32222 1 333344
Q ss_pred EcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCC------C-eEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeC
Q 016134 221 VANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD------N-TIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSL 293 (394)
Q Consensus 221 ~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D------g-~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~ 293 (394)
|+|+ + +++++..+ . ...||.+.+++. ..+..+ ..+..+..+++.|+..+.
T Consensus 178 ~spd--------------------g-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~spdg~~l~~~~~ 234 (347)
T 2gop_A 178 WHRD--------------------K-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAVDSDGERILLYGK 234 (347)
T ss_dssp EETT--------------------E-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEEEECSSCEEEEEC
T ss_pred CCCC--------------------e-EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeECCCCCEEEEEEc
Confidence 4333 2 44444332 1 334443334443 344434 555666444787777765
Q ss_pred C--------CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEE
Q 016134 294 D--------HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVR 365 (394)
Q Consensus 294 D--------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~ 365 (394)
+ ..|.+|| +++. ..+.... ...+.. ...|+ ++ ++++++.++.++|| +.+++....+.....|.
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~-~~l~~~~-~~~~~~-~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~ 305 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEV-MGILDEV-DRGVGQ-AKIKD-GK--VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIM 305 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCE-EESSTTC-CSEEEE-EEEET-TE--EEEEEEETTEEEEE-EESSSEEEEECSSSEEE
T ss_pred cccCCccccceEEEEC--CCce-EeccccC-CcccCC-ccEEc-Cc--EEEEEecCCcEEEE-EcCCceEEEecCCCeEE
Confidence 4 3677777 3333 2222211 111221 13467 66 78888999999999 87665544444466799
Q ss_pred EEEECCCCEEEEEeCCCeE-EEEeCC
Q 016134 366 VIEIGPDKLFFTGDGAGML-GVWKLL 390 (394)
Q Consensus 366 ~l~~sp~~~l~tgs~Dg~I-~vWd~~ 390 (394)
+++|+| .++++++.++.. .||.++
T Consensus 306 ~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 306 GFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEESS-SEEEEEECSSSCCEEEEES
T ss_pred eeeeeC-cEEEEEcCCCChHHheEeC
Confidence 999999 877777776654 777654
No 173
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=1.3e-10 Score=119.45 Aligned_cols=248 Identities=7% Similarity=-0.040 Sum_probs=155.7
Q ss_pred CCCCccceeeeccccccccccCCCeec-CCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc---
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCVR-GDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--- 197 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~~-g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--- 197 (394)
..++...+..+. |+|++.+++..... |+....|++||+.++ +.+.....+. .+..++|+||++.|+.++.++.
T Consensus 120 ~~~~~~~~~~~~-~SPDg~~la~~~~~~G~~~~~i~v~d~~tg-~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 120 SDDGTVALRGYA-FSEDGEYFAYGLSASGSDWVTIKFMKVDGA-KELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGK 196 (710)
T ss_dssp CTTSCEEEEEEE-ECTTSSEEEEEEEETTCSCEEEEEEETTTT-EEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSC
T ss_pred ccCCCEEEEEEE-ECCCCCEEEEEEcCCCCceEEEEEEECCCC-CCCcccccCc-ccceEEEEeCCCEEEEEEECCcccc
Confidence 345555677888 99999999876654 444468999999888 4443222222 3778999999999998887753
Q ss_pred ---------------eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeC-----CC
Q 016134 198 ---------------AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSM-----DN 255 (394)
Q Consensus 198 ---------------vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~-----Dg 255 (394)
+|++.+++... . ++.....|...+..+.|+ +++|+..+. +.
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~----------------~-~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSED----------------I-LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGC----------------E-EEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred ccccccccCCCCEEEEEECCCCcccc----------------e-EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 36666554110 0 000111234445666665 566665554 67
Q ss_pred eEEEEeCCC------Cc-eeEEEcCCCCCcEEEE-EcCCEEEEEeCC----CcEEEEEeCCCc--eeeEeecccCCcceE
Q 016134 256 TIRVWELDT------LE-PVMTLNDHTDAPMSLL-CWDQFLLSCSLD----HTIKVWFATGRG--NLEAAYTHKEDNGVL 321 (394)
Q Consensus 256 ~V~iwd~~~------~~-~~~~~~~h~~~v~~l~-~~~~~l~s~s~D----g~i~vwd~~~~~--~~~~~~~~~~~~~~~ 321 (394)
.|.+||+.+ ++ ....+..+...+.... ..++.|+..+.+ ..|.+||+.++. ....+..+.....+.
T Consensus 260 ~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 339 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLE 339 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE
T ss_pred EEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEE
Confidence 899999976 43 4566666666665532 227766665543 369999987764 234444443322222
Q ss_pred EEEeeECCCCCcEEEEEeCCCe--EEEEECCCCceeEEEec-CCcEEEEEECCCC-EE-EEEe---CCCeEEEEeCCCC
Q 016134 322 ALGGLNDPDGKPVLICACNDNT--VHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LF-FTGD---GAGMLGVWKLLAK 392 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~--I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l-~tgs---~Dg~I~vWd~~~~ 392 (394)
.+ .+++++. ++++...|+. |.+|++.+++.+..+.. ...+..++++|++ .| ++.+ ..+.|.+||+.+.
T Consensus 340 ~~--~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 340 WV--ACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EE--EEETTTE-EEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EE--EEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 22 3455555 8888888885 56677767766655544 5568899999988 33 3333 3578999998764
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.42 E-value=2.2e-10 Score=106.16 Aligned_cols=254 Identities=7% Similarity=-0.056 Sum_probs=151.6
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
....++..+.+++++.|.-+ ... ...++...+..+. +.+.+...++.. .++.|.+||..+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~-~~~~g~l~~~~~----~~~~i~~~d~~~ 75 (333)
T 2dg1_A 16 KSNSAVPIISESELQTITAE--PWL-------------EISKKGLQLEGLN-FDRQGQLFLLDV----FEGNIFKINPET 75 (333)
T ss_dssp GGGCSSCCCCGGGSCEEECE--EEE-------------EEESSCCCEEEEE-ECTTSCEEEEET----TTCEEEEECTTT
T ss_pred CccceeEEeecccCcccccc--eeE-------------EEeccCccccCcE-ECCCCCEEEEEC----CCCEEEEEeCCC
Confidence 44456677789999999221 111 1112223456666 777776544333 234899999977
Q ss_pred CceEEEEecccCCCeEEEEecCCCCEEEEEeCC----Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCC
Q 016134 163 GLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD----GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTR 236 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D----g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~ 236 (394)
+ +.......+...+.+++++++++++++...+ +. +||.+++....+... ..+..
T Consensus 76 ~-~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------------------~~~~~ 135 (333)
T 2dg1_A 76 K-EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED-------------------LSTAY 135 (333)
T ss_dssp C-CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-------------------SSSCC
T ss_pred C-cEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-------------------CccCC
Confidence 6 4444344567889999999999988887766 34 477766654322110 01234
Q ss_pred CEEEEEec--CCeEEEEeC------CCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEE-EEeCCCcEEEEEeCC-
Q 016134 237 PVTCLAVG--RSRLCSGSM------DNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLL-SCSLDHTIKVWFATG- 304 (394)
Q Consensus 237 ~V~~l~~~--~~~l~sgs~------Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~-s~s~Dg~i~vwd~~~- 304 (394)
.+.++.++ ++++++... .+.|..+|..+++... +..+...+..++++ ++.|+ +...++.|.+||+..
T Consensus 136 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~ 214 (333)
T 2dg1_A 136 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 214 (333)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCC
Confidence 56667776 444444432 3566777766555433 22233457788887 55554 445678999999964
Q ss_pred CceeeEe-----ecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCC-------cEEEEEECCC
Q 016134 305 RGNLEAA-----YTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKH-------EVRVIEIGPD 372 (394)
Q Consensus 305 ~~~~~~~-----~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-------~v~~l~~sp~ 372 (394)
+..+..+ ...... .....++++++|. ++++...++.|.+||. +++.+..+.... .+.+++|+|+
T Consensus 215 g~~~~~~~~~~~~~~~~~--~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 215 GVTIQPFGATIPYYFTGH--EGPDSCCIDSDDN-LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp SSSEEEEEEEEEEECCSS--SEEEEEEEBTTCC-EEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred CcCcccccceEEEecCCC--CCCCceEECCCCC-EEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCC
Confidence 2322211 111111 1222345689998 7777777899999998 455655554422 5899999999
Q ss_pred C-EEEEEeCC
Q 016134 373 K-LFFTGDGA 381 (394)
Q Consensus 373 ~-~l~tgs~D 381 (394)
+ .|+.++.+
T Consensus 291 g~~L~v~~~~ 300 (333)
T 2dg1_A 291 TNQLIICSND 300 (333)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEEeCc
Confidence 7 55555444
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.36 E-value=2.4e-11 Score=123.62 Aligned_cols=240 Identities=11% Similarity=-0.038 Sum_probs=149.1
Q ss_pred CCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeE---------EEEec--CCCCE-EEE
Q 016134 124 GDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVS---------GIALP--LRSDK-LFS 191 (394)
Q Consensus 124 g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~---------~l~~s--~~~~~-l~s 191 (394)
+|...+..++ +++...+.+. ...+.++...||....+ ...+.+..|...+. ...|+ ||+++ |+.
T Consensus 21 ~~~~~~~~~~-~s~~~~~~~~--~~~~~~~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 21 SRSGRPACVG-AVGDEVWWVA--PRPAEAGRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HTCSCCEEEE-EETTEEEEEE--EETTTTTEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred hcCCccceeE-EcCCeEEEEe--cCcccCCcEEEEEECCC-CCcceeCCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 3444666666 6765444442 22244557889986444 33566777777766 66665 99998 776
Q ss_pred EeC-CCceeecCC-----CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCC---------
Q 016134 192 GSR-DGTAWNIES-----SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMD--------- 254 (394)
Q Consensus 192 gs~-Dg~vWd~~~-----~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~D--------- 254 (394)
++. +..||.++. ++...+..... ..|...+..++|+ ++.|++++.|
T Consensus 97 ~~~~~~~l~~~~~~~~g~~~~~~l~~~~~-----------------~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 97 THFGDQRLYAFEPDAPGGAVPRPLTPVSA-----------------VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp EBTTTCCEEEECTTSTTCCCCEECSCCCC-----------------STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred EECCCCeEEEEcCCCCCCCCCEeccCCcc-----------------CCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 654 445766653 33333332100 0134445556665 5667777666
Q ss_pred -CeEEEEeCCC------CceeEEEc-CCCCCcEEEEEc--CCEEEEEeCC--------CcEEEEEeC-CCc--eeeEeec
Q 016134 255 -NTIRVWELDT------LEPVMTLN-DHTDAPMSLLCW--DQFLLSCSLD--------HTIKVWFAT-GRG--NLEAAYT 313 (394)
Q Consensus 255 -g~V~iwd~~~------~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~D--------g~i~vwd~~-~~~--~~~~~~~ 313 (394)
..|++||+.+ ++. ..+. .+...+..+.|+ |++|+.++.+ ..|++||+. ++. ....+..
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999987 444 4555 555667777887 7888877754 379999998 451 3333332
Q ss_pred ccCCcceEEEEeeECCCCCcEEEEEeCCC--eEEEEECCCCceeEEEecCCc---------EEEEEECCCC-EEEEEeCC
Q 016134 314 HKEDNGVLALGGLNDPDGKPVLICACNDN--TVHLYELPSFMERGRIFSKHE---------VRVIEIGPDK-LFFTGDGA 381 (394)
Q Consensus 314 ~~~~~~~~~~~~~~s~~g~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~~~---------v~~l~~sp~~-~l~tgs~D 381 (394)
.. ..... ...|+|||+ +++++..++ .|.+||+.+++.......... +..++|+|++ +++++..
T Consensus 239 ~~-~~~~~--~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 239 GP-EEAIA--QAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp ET-TBCEE--EEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CC-CceEc--ceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 21 11222 335799999 888888888 666667656654332222111 5678999998 8888888
Q ss_pred CeEEEEeCC
Q 016134 382 GMLGVWKLL 390 (394)
Q Consensus 382 g~I~vWd~~ 390 (394)
+.++||.++
T Consensus 314 ~~~~l~~~d 322 (662)
T 3azo_A 314 GAAVLGILD 322 (662)
T ss_dssp SSCEEEEEE
T ss_pred CccEEEEEE
Confidence 999999544
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.34 E-value=1.9e-10 Score=108.63 Aligned_cols=207 Identities=11% Similarity=-0.023 Sum_probs=134.4
Q ss_pred EEcCCCceEEEEecccCCCeEE-----EEecCCCCEEEEEeC-CCc----eeecCCCcEEEecCCCCcEEEEEEcCCEEE
Q 016134 158 WFCGEGLTMLAKLEGHEKAVSG-----IALPLRSDKLFSGSR-DGT----AWNIESSAEFSLDGPVGEVYSMVVANEMLF 227 (394)
Q Consensus 158 Wd~~~~~~~~~~l~~h~~~V~~-----l~~s~~~~~l~sgs~-Dg~----vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~ 227 (394)
+|..++ ..+..+..|...... .+|+|||++|+.++. ++. +||+++++...+..
T Consensus 15 ~~~~~g-~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~---------------- 77 (388)
T 3pe7_A 15 QDASTG-AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE---------------- 77 (388)
T ss_dssp ECTTTC-CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC----------------
T ss_pred ecCCCC-cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee----------------
Confidence 455555 567778888776666 889999999998887 664 47888887665432
Q ss_pred EEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEE--c--CCEEEEE----------
Q 016134 228 AGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLC--W--DQFLLSC---------- 291 (394)
Q Consensus 228 ~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~s~---------- 291 (394)
++...+..+.|+ ++.|+.++.++.|++||+.+++....+..+...+....+ + +.+++..
T Consensus 78 -----~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 78 -----GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp -----SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred -----CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccc
Confidence 222222234565 678999998999999999999877766666555544443 3 5666532
Q ss_pred ------------eCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECC-CCCcEEEEEeC------CCeEEEEECCCC
Q 016134 292 ------------SLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP-DGKPVLICACN------DNTVHLYELPSF 352 (394)
Q Consensus 292 ------------s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs~------dg~I~iwd~~~~ 352 (394)
..+..|.+||+.+++... +..+... . ....|+| +|+ .|+.... ...|.++|+...
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~--~--~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQW--L--GHPIYRPYDDS-TVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSC--E--EEEEEETTEEE-EEEEEECSCTTTSSCSEEEEETTSC
T ss_pred cccchhhhhhccCCcceEEEEECCCCceEE-eecCCcc--c--cccEECCCCCC-EEEEEEecCCCCCcceEEEEeCCCC
Confidence 234689999998775433 3333222 2 2334799 998 5655544 337888888765
Q ss_pred ceeEEEecC--CcEEEEEECCCC-EEEEEe-CCC----eEEEEeCCCC
Q 016134 353 MERGRIFSK--HEVRVIEIGPDK-LFFTGD-GAG----MLGVWKLLAK 392 (394)
Q Consensus 353 ~~~~~~~~~--~~v~~l~~sp~~-~l~tgs-~Dg----~I~vWd~~~~ 392 (394)
......... ..+..++|+||| .|+..+ .++ .|.+||+.+.
T Consensus 227 ~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 227 NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 433222222 247889999999 554433 222 3999998765
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.34 E-value=2e-10 Score=102.86 Aligned_cols=231 Identities=10% Similarity=0.017 Sum_probs=143.8
Q ss_pred eeeccccccccccC-CCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcE
Q 016134 130 KKTTLKNVCCHWLL-GNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAE 206 (394)
Q Consensus 130 ~~~~~~~~~~~~~~-~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~ 206 (394)
..++ +.+.+...+ +.. .++.|.+|+..+. ........+...+.+|+++++++++++.. ++.| ||......
T Consensus 27 ~~i~-~~~~g~l~v~~~~----~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 27 SGVA-VDSAGNVYVTSEG----MYGRVVKLATGST-GTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp EEEE-ECTTCCEEEEECS----SSCEEEEECC------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCC
T ss_pred cceE-ECCCCCEEEEccC----CCCcEEEecCCCc-ccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceE
Confidence 3444 556555333 222 2348899987654 22222233446788999999999666665 6664 66655443
Q ss_pred EEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc
Q 016134 207 FSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW 284 (394)
Q Consensus 207 ~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~ 284 (394)
..+.. .....+..++++ ++++++...++.|.+||..+.............+..++++
T Consensus 100 ~~~~~---------------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~ 158 (270)
T 1rwi_B 100 TVLPF---------------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD 158 (270)
T ss_dssp EECCC---------------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC
T ss_pred eeeec---------------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe
Confidence 32210 112456777776 4556666678899999876554433222333467788887
Q ss_pred --CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-C
Q 016134 285 --DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-K 361 (394)
Q Consensus 285 --~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~ 361 (394)
++++++...++.|.+||.............. .... .++++++|. ++++...++.|.+|+............ .
T Consensus 159 ~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~p~--~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 233 (270)
T 1rwi_B 159 NSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI--TAPW--GIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVLPFTGL 233 (270)
T ss_dssp TTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC--CSEE--EEEECTTCC-EEEEETTTSCEEEECTTCSCCEECCCCSC
T ss_pred CCCCEEEEECCCCEEEEEecCCCceEeecccCC--CCce--EEEECCCCC-EEEEECCCCcEEEEcCCCCcceeeccCCC
Confidence 6666666667899999987654332211111 2222 334688986 888777788999999876543322111 2
Q ss_pred CcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 362 HEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 362 ~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
..+.++++++++ ++++...++.|+++++..+.
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 468999999999 88888899999999988754
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.34 E-value=9.3e-10 Score=100.28 Aligned_cols=227 Identities=11% Similarity=0.025 Sum_probs=143.3
Q ss_pred ceeeecccccccc-ccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCC
Q 016134 128 TSKKTTLKNVCCH-WLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESS 204 (394)
Q Consensus 128 ~v~~~~~~~~~~~-~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~ 204 (394)
....+. |.+.+. .+.+....+ .|+.|+..++ ...+..+...+.+++++++++++++...++. +||..++
T Consensus 29 ~~eg~~-~d~~g~~l~~~~~~~~----~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 29 WTEGPV-YVPARSAVIFSDVRQN----RTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGG 100 (296)
T ss_dssp SEEEEE-EEGGGTEEEEEEGGGT----EEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTC
T ss_pred cccCCe-EeCCCCEEEEEeCCCC----EEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCC
Confidence 445666 888887 444333333 8999999876 5566677888999999999998887776666 4887777
Q ss_pred cEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEE----Ee-------------CCCeEEEEeCCCC
Q 016134 205 AEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCS----GS-------------MDNTIRVWELDTL 265 (394)
Q Consensus 205 ~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~s----gs-------------~Dg~V~iwd~~~~ 265 (394)
+...+..... ......+..++++ ++++++ |+ ..+.|..+|.. +
T Consensus 101 ~~~~~~~~~~-----------------~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 101 EWESIADSFE-----------------GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp CEEEEECEET-----------------TEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred cEEEEeeccC-----------------CCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 6543211100 0111234455665 555665 32 13456666655 4
Q ss_pred ceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeC-CCce---eeEeecccCCcceEEEEeeECCCCCcEEEEEe
Q 016134 266 EPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFAT-GRGN---LEAAYTHKEDNGVLALGGLNDPDGKPVLICAC 339 (394)
Q Consensus 266 ~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~-~~~~---~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs 339 (394)
+ +..+..+...+..++++ ++.|++.+.++.|.+||+. +++. ...+.........+ +++++|. ++++.
T Consensus 163 ~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i----~~d~~G~-l~v~~- 235 (296)
T 3e5z_A 163 T-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL----RVDAGGL-IWASA- 235 (296)
T ss_dssp C-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE----EEBTTSC-EEEEE-
T ss_pred C-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE----EECCCCC-EEEEc-
Confidence 4 34445566677889998 6777777778999999997 3332 12221111111222 3589998 66655
Q ss_pred CCCeEEEEECCCCceeEEEecCCcEEEEEE-CCCC-EEEEEeCCCeEEEEeCC
Q 016134 340 NDNTVHLYELPSFMERGRIFSKHEVRVIEI-GPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 340 ~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~-sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
++.|.+||.. ++.+..+.....+++++| .|++ .|+.++.++ +.-++..
T Consensus 236 -~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~ 285 (296)
T 3e5z_A 236 -GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETN 285 (296)
T ss_dssp -TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECS
T ss_pred -CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEcc
Confidence 7899999987 666666655333899999 5887 777777764 4344443
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=1.9e-10 Score=106.94 Aligned_cols=263 Identities=8% Similarity=-0.052 Sum_probs=162.9
Q ss_pred CCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEE
Q 016134 90 GSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAK 169 (394)
Q Consensus 90 ~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~ 169 (394)
++.+.++.++|.+++.+...... ....-..| .....+. +.....|+++. . ++.|.+||..++ +.+.+
T Consensus 13 g~~~~~l~~~d~~t~~~~~~i~~----~~n~~~lg--~~~~~i~-~~~~~lyv~~~-~----~~~v~viD~~t~-~~~~~ 79 (328)
T 3dsm_A 13 QYSNATLSYYDPATCEVENEVFY----RANGFKLG--DVAQSMV-IRDGIGWIVVN-N----SHVIFAIDINTF-KEVGR 79 (328)
T ss_dssp TSCCBEEEEEETTTTEEECSHHH----HHHSSCCB--SCEEEEE-EETTEEEEEEG-G----GTEEEEEETTTC-CEEEE
T ss_pred CCCCceEEEEECCCCEEhhhhHh----hhcCcccC--ccceEEE-EECCEEEEEEc-C----CCEEEEEECccc-EEEEE
Confidence 45588999999998876431100 00000111 1233344 33444454432 2 348999999887 66666
Q ss_pred ecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEE-ecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCC
Q 016134 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFS-LDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRS 246 (394)
Q Consensus 170 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~-~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~ 246 (394)
+. .......|+++++++.+++...++. +||.++++... +.... ..++......+++.++
T Consensus 80 i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~-----------------~~~~~~~p~~i~~~~~ 141 (328)
T 3dsm_A 80 IT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD-----------------MDMESGSTEQMVQYGK 141 (328)
T ss_dssp EE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT-----------------CCTTTCBCCCEEEETT
T ss_pred cC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC-----------------ccccCCCcceEEEECC
Confidence 64 3467899999998855455446776 58888887653 21110 0011113334455666
Q ss_pred eEEEEe--CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCC----------CcEEEEEeCCCceeeEee
Q 016134 247 RLCSGS--MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLD----------HTIKVWFATGRGNLEAAY 312 (394)
Q Consensus 247 ~l~sgs--~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~D----------g~i~vwd~~~~~~~~~~~ 312 (394)
.|+++. .++.|.++|+++++.+.++... .....+.++ +++++++..+ +.|.++|..+.+....+.
T Consensus 142 ~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp EEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred EEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 666655 4899999999999988887643 345667776 5555555444 789999998877665554
Q ss_pred cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEE--ec-CCcEEEEEECCC-C-EEEEE----eCCCe
Q 016134 313 THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRI--FS-KHEVRVIEIGPD-K-LFFTG----DGAGM 383 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~--~~-~~~v~~l~~sp~-~-~l~tg----s~Dg~ 383 (394)
.... .... .++++|+++ .|.++.. .|.+||..+++..... .. ......++++|+ + ++++. ..++.
T Consensus 221 ~~~g-~~p~--~la~~~d~~-~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~ 294 (328)
T 3dsm_A 221 FKLG-DWPS--EVQLNGTRD-TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGI 294 (328)
T ss_dssp CCTT-CCCE--EEEECTTSC-EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEE
T ss_pred cCCC-CCce--eEEEecCCC-EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCE
Confidence 3211 1222 234699988 5555543 8999999887653211 11 356899999995 4 55665 57889
Q ss_pred EEEEeCC
Q 016134 384 LGVWKLL 390 (394)
Q Consensus 384 I~vWd~~ 390 (394)
|.+||..
T Consensus 295 V~v~d~~ 301 (328)
T 3dsm_A 295 VYRYSPQ 301 (328)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9999976
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=1.3e-09 Score=98.76 Aligned_cols=197 Identities=10% Similarity=-0.012 Sum_probs=136.0
Q ss_pred CCCCCeEEEEEcCCCceEEEEecccC-CCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEE-EecCCCCcEEEEEEcCC
Q 016134 149 GDECRFLHSWFCGEGLTMLAKLEGHE-KAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEF-SLDGPVGEVYSMVVANE 224 (394)
Q Consensus 149 g~~~~~i~iWd~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~-~~~~~~~~v~~l~~~~~ 224 (394)
++.++.|.+||.+++ +.+.++..+. ..+.++++.|+|++|++ .++. .||. +++.+ .+...
T Consensus 11 ~~~~~~v~~~d~~tG-~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~------------ 74 (276)
T 3no2_A 11 GSGWNKIAIINKDTK-EIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP------------ 74 (276)
T ss_dssp CTTCSEEEEEETTTT-EEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC------------
T ss_pred eCCCCEEEEEECCCC-eEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC------------
Confidence 455669999999888 7788888776 57899999999999993 3444 4776 56554 22211
Q ss_pred EEEEEecCCCCCCEEEEEec--CCeEEEEeC-CCeEEEEeCCCCceeEEEcC------CCCCcEEEEEc--CCEEEEEeC
Q 016134 225 MLFAGAQDGHTRPVTCLAVG--RSRLCSGSM-DNTIRVWELDTLEPVMTLND------HTDAPMSLLCW--DQFLLSCSL 293 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~-Dg~V~iwd~~~~~~~~~~~~------h~~~v~~l~~~--~~~l~s~s~ 293 (394)
....+.++.+. ++.+++.+. ++.|..+|. +++.+.++.. +......+.+. ++++++...
T Consensus 75 ---------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 75 ---------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp ---------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred ---------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 11234444443 677777776 777877886 6777766642 11123333344 889999999
Q ss_pred CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC-------CcEEE
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK-------HEVRV 366 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-------~~v~~ 366 (394)
++.|..||.. ++.+..+...... ... ...+++. +++++..++.|..+|..+++.+.++... ..+..
T Consensus 145 ~~~v~~~d~~-G~~~w~~~~~~~~-~~~----~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~ 217 (276)
T 3no2_A 145 TSEVREIAPN-GQLLNSVKLSGTP-FSS----AFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQ 217 (276)
T ss_dssp TTEEEEECTT-SCEEEEEECSSCC-CEE----EECTTSC-EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEE
T ss_pred CCEEEEECCC-CCEEEEEECCCCc-cce----eEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcccccccc
Confidence 9999999987 7777666543222 222 2478888 8888888889999999999998888641 12788
Q ss_pred EEECCCC-EEEEE
Q 016134 367 IEIGPDK-LFFTG 378 (394)
Q Consensus 367 l~~sp~~-~l~tg 378 (394)
++..++| ++++.
T Consensus 218 ~~~~~~G~i~v~~ 230 (276)
T 3no2_A 218 LFPLQNGGLYICN 230 (276)
T ss_dssp EEECTTSCEEEEE
T ss_pred ceEcCCCCEEEEe
Confidence 9999999 55555
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.33 E-value=4.3e-11 Score=113.22 Aligned_cols=248 Identities=12% Similarity=-0.035 Sum_probs=143.9
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcE
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAE 206 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~ 206 (394)
+..++ ++|++.+++..... +....|.+||+.++ +......++......+.|+||+++|+.++.++. +||+.+++.
T Consensus 38 ~~~~~-~SpdG~~l~~~~~~-~g~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKC-FTQDGKKLLFAGDF-DGNRNYYLLNLETQ-QAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCC-BCTTSCEEEEEECT-TSSCEEEEEETTTT-EEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCc-CCCCCCEEEEEEec-CCCceEEEEECCCC-cEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 44455 99999988755443 23347889998876 444333333333334889999999999998887 588888776
Q ss_pred EEecC-CCCcEE---EEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEE-----eCCCeEEEEeCCCCceeEEEcCCC
Q 016134 207 FSLDG-PVGEVY---SMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSG-----SMDNTIRVWELDTLEPVMTLNDHT 275 (394)
Q Consensus 207 ~~~~~-~~~~v~---~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sg-----s~Dg~V~iwd~~~~~~~~~~~~h~ 275 (394)
..+.. +..... .+++......... ....+.|+ ++.++.. ..+..|.+||+.+++..... .+.
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~------~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~ 187 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGI------EILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDT 187 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEE------EEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EES
T ss_pred EEEEecccccCCCCCEEEeccCCccccc------cccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCC
Confidence 54332 222111 1111111000000 00001222 3344332 45678999999988765544 456
Q ss_pred CCcEEEEEc---CCEEEEEeCC------CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----
Q 016134 276 DAPMSLLCW---DQFLLSCSLD------HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND----- 341 (394)
Q Consensus 276 ~~v~~l~~~---~~~l~s~s~D------g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d----- 341 (394)
..+..+.|+ +..|+..+.+ ..|.+||+...+. ..+..+.. ........|+|+|+. |+..+.+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~--~~~~~~~~~spdg~~-l~~~~~~~~~~~ 263 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAE--GESCTHEFWIPDGSA-MAYVSYFKGQTD 263 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCT--TEEEEEEEECTTSSC-EEEEEEETTTCC
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce-eEeeccCC--CccccceEECCCCCE-EEEEecCCCCcc
Confidence 678888886 3456665543 3688888765432 22222111 112223457999994 4444333
Q ss_pred CeEEEEECCCCceeEEEecCCcEEEEEECC-CC-EEEEEe----------------CCCeEEEEeCCCC
Q 016134 342 NTVHLYELPSFMERGRIFSKHEVRVIEIGP-DK-LFFTGD----------------GAGMLGVWKLLAK 392 (394)
Q Consensus 342 g~I~iwd~~~~~~~~~~~~~~~v~~l~~sp-~~-~l~tgs----------------~Dg~I~vWd~~~~ 392 (394)
+.|++||+.+++........ ... +.|+| ++ +|++++ .+..|.+||+.+.
T Consensus 264 ~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 264 RVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp EEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTT
T ss_pred ceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccC
Confidence 45999999887654333222 233 89999 99 666654 3478999998654
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.33 E-value=2.1e-09 Score=99.49 Aligned_cols=227 Identities=10% Similarity=-0.044 Sum_probs=143.9
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcE
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAE 206 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~ 206 (394)
+.++. +++....++....+ +.++.|. + +....+..+...+.+++|++++++++++..++.| ||.++++.
T Consensus 8 ~~~~~-~~~~~~~~~~~~~~----~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 8 LPTLF-YSGKSNSAVPIISE----SELQTIT---A-EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCBCC-SCGGGGCSSCCCCG----GGSCEEE---C-EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred cceee-ecCCccceeEEeec----ccCcccc---c-ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE
Confidence 34444 66666666555333 3677782 2 5567777788889999999999988888888874 77777765
Q ss_pred EEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCC----CeEEEEeCCCCceeEEEc--CCCCCc
Q 016134 207 FSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMD----NTIRVWELDTLEPVMTLN--DHTDAP 278 (394)
Q Consensus 207 ~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~D----g~V~iwd~~~~~~~~~~~--~h~~~v 278 (394)
..+.. .+...+.+++++ ++++++...+ +.|.+||.++++....+. .+...+
T Consensus 79 ~~~~~---------------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 137 (333)
T 2dg1_A 79 KRPFV---------------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCI 137 (333)
T ss_dssp EEEEE---------------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCE
T ss_pred EEEee---------------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcc
Confidence 43210 223456777775 4555555555 689999998876553443 244568
Q ss_pred EEEEEc--CCEEEEEeC------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC
Q 016134 279 MSLLCW--DQFLLSCSL------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP 350 (394)
Q Consensus 279 ~~l~~~--~~~l~s~s~------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~ 350 (394)
..+.++ +.++++... .+.|..+|...++. ..+..... ... ...++|+++.++++...++.|.+||+.
T Consensus 138 ~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~--~~~--~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 138 DDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNIS--VAN--GIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEES--SEE--EEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred cceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCC--ccc--ceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 888888 566665543 24455555443332 22222111 122 234699998455666678899999996
Q ss_pred C-CceeEEE----e----cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 351 S-FMERGRI----F----SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 351 ~-~~~~~~~----~----~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
+ +.....+ . ....+..+++++++ ++++...++.|.+|+.+
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 4 3322111 1 12368889999999 66666678899999874
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.33 E-value=9.6e-11 Score=120.15 Aligned_cols=243 Identities=7% Similarity=-0.078 Sum_probs=152.0
Q ss_pred CCCCccceeeeccccccccccCCCee-cCCCCCeEEEEEcCCCceEEEEecccCCCe--EEEEecCCCCEEEEEeCCCc-
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCV-RGDECRFLHSWFCGEGLTMLAKLEGHEKAV--SGIALPLRSDKLFSGSRDGT- 197 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~-~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V--~~l~~s~~~~~l~sgs~Dg~- 197 (394)
..++...+..+. ++|++.++|-... +|+.+..|++||+.++.. +. ..+...+ ..++|+|||+.|+.++.|..
T Consensus 116 a~~~~~~~~~~~-~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~-~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 116 SKDGTVSLGTWA-VSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW-SK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDP 191 (695)
T ss_dssp SSSSCEEEEEEE-ECTTSSEEEEEEEETTCSCCEEEEEETTTCCB-CS--SCCBSCCTTCCCEECTTSSEEEEEECCCCT
T ss_pred ccCCCEEEEEEE-ECCCCCEEEEEECCCCCceEEEEEEECCCCCC-cC--CcccCcccccceEEecCCCEEEEEEecCCC
Confidence 345666788888 9999999885444 566678999999988732 20 1222223 68999999999999988653
Q ss_pred --------------eeecCCCcE--EEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCC----
Q 016134 198 --------------AWNIESSAE--FSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDN---- 255 (394)
Q Consensus 198 --------------vWd~~~~~~--~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg---- 255 (394)
+|++.+++. ..+. ....|...+..+.|+ +++|+..+.++
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~-------------------~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVH-------------------ERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEE-------------------CCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEE-------------------ecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 477776651 1110 111344566677776 56676666555
Q ss_pred eEEEEeCCCCceeEEEcCCCCCcEEEEEc-CCEEEEEe---CCCcEEEEEeCCCce--eeEeecccCCcceEEEEeeECC
Q 016134 256 TIRVWELDTLEPVMTLNDHTDAPMSLLCW-DQFLLSCS---LDHTIKVWFATGRGN--LEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 256 ~V~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s---~Dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
.|.+||..+++ ...+..+...+....+. +++++... .++.|.+||+.+++. ...+..+.....+..+ .++
T Consensus 253 ~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~--~~~- 328 (695)
T 2bkl_A 253 DVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSV--SIV- 328 (695)
T ss_dssp EEEEECTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEE--EEE-
T ss_pred EEEEEcCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEE--EEE-
Confidence 67777765554 34455555566666555 55444433 257899999876543 2333333222222222 234
Q ss_pred CCCcEEEEEeCCCeEEEEECC-CCceeEEEec--CCcEEEEEECCCC-EEE-EEe---CCCeEEEEeCCCC
Q 016134 330 DGKPVLICACNDNTVHLYELP-SFMERGRIFS--KHEVRVIEIGPDK-LFF-TGD---GAGMLGVWKLLAK 392 (394)
Q Consensus 330 ~g~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~--~~~v~~l~~sp~~-~l~-tgs---~Dg~I~vWd~~~~ 392 (394)
++. ++++...|+..+||.+. +++....+.. ...+..++++|++ .|+ +.+ ..++|.+||+.+.
T Consensus 329 ~~~-lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 329 GGH-LSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp TTE-EEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CCE-EEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 444 88889999998888665 3444444432 4567888999988 444 332 3468999998764
No 184
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=1.2e-10 Score=119.49 Aligned_cols=241 Identities=9% Similarity=-0.034 Sum_probs=149.0
Q ss_pred CCCcccccccccccc-----cCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeec
Q 016134 74 SPPSYNRLKNNLWVS-----SGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVR 148 (394)
Q Consensus 74 ~~~~~~~~~~~~~~~-----s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~ 148 (394)
...+|++ ++.+|+ +|+.+.+|++||++++.... .. ...+.+ ...+. |+|++..++....+
T Consensus 124 ~~~~~SP--DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~---------~~~~~~--~~~~~-wspDg~~l~~~~~d 188 (695)
T 2bkl_A 124 GTWAVSW--DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VD---------VIEGGK--YATPK-WTPDSKGFYYEWLP 188 (695)
T ss_dssp EEEEECT--TSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SC---------CBSCCT--TCCCE-ECTTSSEEEEEECC
T ss_pred EEEEECC--CCCEEEEEECCCCCceEEEEEEECCCCCCcC-Cc---------ccCccc--ccceE-EecCCCEEEEEEec
Confidence 3456676 888888 88888999999999987531 00 001110 13455 99999888776655
Q ss_pred CC---------CCCeEEEEEcCCCc---eEEEEecccCCCeEEEEecCCCCEEEEEeCCC----cee--ecCCCcEEEec
Q 016134 149 GD---------ECRFLHSWFCGEGL---TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG----TAW--NIESSAEFSLD 210 (394)
Q Consensus 149 g~---------~~~~i~iWd~~~~~---~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg----~vW--d~~~~~~~~~~ 210 (394)
.. ....|++|++.++. .++.....|...+..+.|+|||++|+..+.++ .|| +..+++...+.
T Consensus 189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~ 268 (695)
T 2bkl_A 189 TDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV 268 (695)
T ss_dssp CCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE
T ss_pred CCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee
Confidence 42 23459999998764 35555556777899999999999999888766 354 43333333322
Q ss_pred CCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec-CCeEEEEe---CCCeEEEEeCCCCce--eEEEcCC--CCCcEEEE
Q 016134 211 GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-RSRLCSGS---MDNTIRVWELDTLEP--VMTLNDH--TDAPMSLL 282 (394)
Q Consensus 211 ~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~l~sgs---~Dg~V~iwd~~~~~~--~~~~~~h--~~~v~~l~ 282 (394)
.+ ...+....+. +++++... .++.|.+||+.+++. ...+..+ ...+..+.
T Consensus 269 ~~----------------------~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 269 KG----------------------VGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp EC----------------------SSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred cC----------------------CCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence 21 1222233333 44333333 258999999987653 2344333 34577778
Q ss_pred Ec-CCEEEEEeCCCcEEEEEeC-CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC---CCeEEEEECCCCce
Q 016134 283 CW-DQFLLSCSLDHTIKVWFAT-GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN---DNTVHLYELPSFME 354 (394)
Q Consensus 283 ~~-~~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~---dg~I~iwd~~~~~~ 354 (394)
+. +.++++...|+..+||.+. .++....+..+ ....+ ..+.++|+++.++++.+. .++|++||+.+++.
T Consensus 327 ~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~-~~~~v--~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 327 IVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLP-GVGAA--SNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EETTEEEEEEEETTEEEEEEEETTCCEEEECCCS-SSSEE--CCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EECCEEEEEEEECCEEEEEEEeCCCCeeEEecCC-CCeEE--EEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 77 5677888889998888765 34434333222 11122 223457888745444432 46899999988764
No 185
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.31 E-value=2.5e-09 Score=96.77 Aligned_cols=198 Identities=12% Similarity=0.092 Sum_probs=134.5
Q ss_pred cccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEe-c-CC
Q 016134 171 EGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAV-G-RS 246 (394)
Q Consensus 171 ~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~-~-~~ 246 (394)
.+|-..+.+|+++++++++++...++. +||.+ ++.+......+ ...++...+..+++ . ..
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~---------------~~~~~~~~p~~i~~~~~~g 89 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECG---------------KRDSQLLYPNRVAVVRNSG 89 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBS---------------SSTTCBSSEEEEEEETTTT
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccC---------------CCcccccCceEEEEEcCCC
Confidence 456678999999999998888888877 48876 43332111100 11145567788888 3 34
Q ss_pred eEEEEe-C-CCeEEEEeCCCCceeEEEcC-CCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceE
Q 016134 247 RLCSGS-M-DNTIRVWELDTLEPVMTLND-HTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVL 321 (394)
Q Consensus 247 ~l~sgs-~-Dg~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 321 (394)
.|+.+. . ++.|.+|| .+++.+..+.. +...+..++++ ++++++...++.|.+||.. ++.+..+..........
T Consensus 90 ~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp EEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEE
T ss_pred eEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcE
Confidence 444444 3 89999999 56777777643 44578899987 6677777778999999964 44444433211112222
Q ss_pred EEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC---CcEEEEEECCCC-EEEEEeCCC-eEEEEeCC
Q 016134 322 ALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK---HEVRVIEIGPDK-LFFTGDGAG-MLGVWKLL 390 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~---~~v~~l~~sp~~-~l~tgs~Dg-~I~vWd~~ 390 (394)
.+++++++. ++++...++.|++||.. ++.+..+... ..+..+++++++ ++++...++ .|.+|+..
T Consensus 168 --~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 168 --GVVVNDKQE-IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp --EEEECSSSE-EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred --EEEECCCCC-EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 334689988 88888889999999974 4555555432 468999999999 777777775 99999854
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.31 E-value=1.9e-09 Score=100.08 Aligned_cols=214 Identities=7% Similarity=-0.046 Sum_probs=144.5
Q ss_pred ecCCCCCeEEEEEcCCCceEEEEec------ccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEE
Q 016134 147 VRGDECRFLHSWFCGEGLTMLAKLE------GHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYS 218 (394)
Q Consensus 147 ~~g~~~~~i~iWd~~~~~~~~~~l~------~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~ 218 (394)
.-|..++.|.++|.+++ +....+. ........+++. +++++++...++. +||.++++.+....
T Consensus 11 ~~g~~~~~l~~~d~~t~-~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~------- 81 (328)
T 3dsm_A 11 NFQYSNATLSYYDPATC-EVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT------- 81 (328)
T ss_dssp CTTSCCBEEEEEETTTT-EEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-------
T ss_pred CCCCCCceEEEEECCCC-EEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-------
Confidence 33455779999999887 4444331 122456778874 3445555555566 69999888763211
Q ss_pred EEEcCCEEEEEecCCCCCCEEEEEec-CCeEEEEe-CCCeEEEEeCCCCceeEEEcCCC-----CCcEEEEEcCCEEEEE
Q 016134 219 MVVANEMLFAGAQDGHTRPVTCLAVG-RSRLCSGS-MDNTIRVWELDTLEPVMTLNDHT-----DAPMSLLCWDQFLLSC 291 (394)
Q Consensus 219 l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~l~sgs-~Dg~V~iwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~l~s~ 291 (394)
.......++++ +..++++. .++.|.+||+.+++....+.... .....+++.+..|+.+
T Consensus 82 ---------------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~ 146 (328)
T 3dsm_A 82 ---------------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVN 146 (328)
T ss_dssp ---------------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEE
T ss_pred ---------------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEE
Confidence 12345566663 34555555 78999999999999887776433 1455666676666666
Q ss_pred e--CCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC----------CeEEEEECCCCceeEEEe
Q 016134 292 S--LDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND----------NTVHLYELPSFMERGRIF 359 (394)
Q Consensus 292 s--~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d----------g~I~iwd~~~~~~~~~~~ 359 (394)
. .++.|.++|+.+++.+..+.....+ ..+ .++|+|+ ++++...+ +.|.++|..+++....+.
T Consensus 147 ~~~~~~~v~viD~~t~~~~~~i~~g~~p-~~i----~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 147 CWSYQNRILKIDTETDKVVDELTIGIQP-TSL----VMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp ECTTCCEEEEEETTTTEEEEEEECSSCB-CCC----EECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred cCCCCCEEEEEECCCCeEEEEEEcCCCc-cce----EEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 5 4889999999988777666543322 222 3589998 66665544 789999999988776665
Q ss_pred c--CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 360 S--KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 360 ~--~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
. ......++++|++ .|+.+.. .|.+||+.+.
T Consensus 221 ~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~ 254 (328)
T 3dsm_A 221 FKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEAD 254 (328)
T ss_dssp CCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCS
T ss_pred cCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCC
Confidence 4 3468999999988 6666654 8999998653
No 187
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.29 E-value=1.2e-10 Score=110.00 Aligned_cols=178 Identities=7% Similarity=0.006 Sum_probs=128.7
Q ss_pred CeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCC
Q 016134 176 AVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD 254 (394)
Q Consensus 176 ~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D 254 (394)
.++.|++++...+|++|+.++. +|+++........... . +.+..++ .+.. |..|+|+++.|+++ .+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~-~-----~~~~~~~-----~lp~-V~~l~fd~~~L~v~-~~ 105 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDST-P-----LTFKWEK-----EIPD-VIFVCFHGDQVLVS-TR 105 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSC-C-----CCCSEEE-----ECTT-EEEEEEETTEEEEE-ES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccc-c-----ccceEEe-----eCCC-eeEEEECCCEEEEE-cC
Confidence 6899999999999999999987 6886543310000000 0 1111111 3455 89999977888888 88
Q ss_pred CeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcE
Q 016134 255 NTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPV 334 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~ 334 (394)
+.|++||+++......+..|...+.++.+....++++..||.|.+||+.++.... .. ..+. +++|+|+|
T Consensus 106 ~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~--~~Vs--~v~WSpkG--- 174 (388)
T 1xip_A 106 NALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LA--QNVT--SFDVTNSQ--- 174 (388)
T ss_dssp SEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EE--ESEE--EEEECSSE---
T ss_pred CcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----cc--CCce--EEEEcCCc---
Confidence 9999999988776666777888888888876569999999999999998766532 11 1233 34579998
Q ss_pred EEEEeCCCeEEEEECCCCce--eEEEe----------cCCcEEEEEECCCC-EEEE
Q 016134 335 LICACNDNTVHLYELPSFME--RGRIF----------SKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 335 l~sgs~dg~I~iwd~~~~~~--~~~~~----------~~~~v~~l~~sp~~-~l~t 377 (394)
++.|..||++++|+...... ...+. +...|.+|.|.+++ ++++
T Consensus 175 ~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 46688899999999887765 55561 35679999999998 4444
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.29 E-value=4e-10 Score=104.85 Aligned_cols=214 Identities=9% Similarity=0.054 Sum_probs=127.5
Q ss_pred CCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCC---c----eeecCCCcEEEecCCCCcEEEEEEcCC
Q 016134 152 CRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG---T----AWNIESSAEFSLDGPVGEVYSMVVANE 224 (394)
Q Consensus 152 ~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg---~----vWd~~~~~~~~~~~~~~~v~~l~~~~~ 224 (394)
+..|.+||+.++ +. ..+ ..+..++|+|||++|+.++.++ . +|++.+++...+..... +..+.|+|+
T Consensus 42 ~~~l~~~d~~~~-~~-~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspd 114 (347)
T 2gop_A 42 ENTIVIENLKNN-AR-RFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNED 114 (347)
T ss_dssp EEEEEEEETTTC-CE-EEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTT
T ss_pred cceEEEEeCCCC-ce-EEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCC
Confidence 457999999876 32 233 5688999999999999887653 2 46777877665543333 777788776
Q ss_pred --EEEEEecCCCC----CCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCC
Q 016134 225 --MLFAGAQDGHT----RPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLD 294 (394)
Q Consensus 225 --~l~~~~~~~h~----~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~D 294 (394)
.|+....+... ..+..+.|. +..+ .......|.+||+.+++.+..+.. . .+..+.|+ + +++++..+
T Consensus 115 g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 115 SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF-FDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp SSEEEEEEECCCC---------CCCC----------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECC
T ss_pred CCEEEEEEccCCCcCCcEEEcccceeecCccc-ccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecc
Confidence 44444322100 001111111 1101 011245799999998877455554 3 78888888 5 66666554
Q ss_pred C-------cEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC--------CeEEEEECCCCceeEEEe
Q 016134 295 H-------TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND--------NTVHLYELPSFMERGRIF 359 (394)
Q Consensus 295 g-------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d--------g~I~iwd~~~~~~~~~~~ 359 (394)
. ...||.+.++ ....+..+ ..... ++|+|+ .|+..+.+ ..|.+|| +++.. .+.
T Consensus 191 ~~~~~~~~~~~l~~~d~~-~~~~l~~~---~~~~~----~spdg~-~l~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~ 258 (347)
T 2gop_A 191 EIIPQYFKFWDIYIWEDG-KEEKMFEK---VSFYA----VDSDGE-RILLYGKPEKKYMSEHNKLYIYD--GKEVM-GIL 258 (347)
T ss_dssp CSSCCSSCCEEEEEEETT-EEEEEEEE---ESEEE----EEECSS-CEEEEECCSSSCCCSSCEEEEEC--SSCEE-ESS
T ss_pred cccccccccccEEEeCCC-ceEEeccC---cceee----ECCCCC-EEEEEEccccCCccccceEEEEC--CCceE-ecc
Confidence 2 4455555433 33333332 22222 288998 45544433 4688888 44432 332
Q ss_pred c--CCcEEE-EEECCCCEEEEEeCCCeEEEEeCC
Q 016134 360 S--KHEVRV-IEIGPDKLFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 360 ~--~~~v~~-l~~sp~~~l~tgs~Dg~I~vWd~~ 390 (394)
. ...+.. +.|+ ++++++++.++.++|| +.
T Consensus 259 ~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp TTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EE
T ss_pred ccCCcccCCccEEc-CcEEEEEecCCcEEEE-Ec
Confidence 2 446776 8999 7788888999999999 76
No 189
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.29 E-value=9.4e-10 Score=102.14 Aligned_cols=197 Identities=11% Similarity=0.047 Sum_probs=132.3
Q ss_pred CCCeEEEEecCCCCEEEEEeCCCc--------------------------eeecCCCcEEEecCCCCcEEEEEEcCCEEE
Q 016134 174 EKAVSGIALPLRSDKLFSGSRDGT--------------------------AWNIESSAEFSLDGPVGEVYSMVVANEMLF 227 (394)
Q Consensus 174 ~~~V~~l~~s~~~~~l~sgs~Dg~--------------------------vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~ 227 (394)
-+.|.+|+++|+|+++++...++. +||.++++...
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~------------------- 83 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ------------------- 83 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE-------------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe-------------------
Confidence 467999999999999988887742 24433333321
Q ss_pred EEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCc-eeEEE---------cCCCCCcEEEEEc---CCEEEEEe
Q 016134 228 AGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLE-PVMTL---------NDHTDAPMSLLCW---DQFLLSCS 292 (394)
Q Consensus 228 ~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~-~~~~~---------~~h~~~v~~l~~~---~~~l~s~s 292 (394)
....++......|+++ ++++++...++.|++||..... .+..+ ..+...+..++++ +.++++.+
T Consensus 84 -~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 84 -SSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp -EECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC
T ss_pred -ccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC
Confidence 1112455677888887 6778888889999999986542 56666 3445578899997 45666665
Q ss_pred -CCCcEEEEEeCCCceeeEeecccCC------cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---CC
Q 016134 293 -LDHTIKVWFATGRGNLEAAYTHKED------NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---KH 362 (394)
Q Consensus 293 -~Dg~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~ 362 (394)
.++.|++|| .+++.+..+...... .......++++|++..++++...++.|++||..+++.+..+.. ..
T Consensus 163 ~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~ 241 (329)
T 3fvz_A 163 YCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGR 241 (329)
T ss_dssp SSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTT
T ss_pred CCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCC
Confidence 589999999 455555544322111 0011223346888443888888899999999998888877753 45
Q ss_pred cEEEEEECCCC-EEEEEe-------CCCeEEEEeCCCC
Q 016134 363 EVRVIEIGPDK-LFFTGD-------GAGMLGVWKLLAK 392 (394)
Q Consensus 363 ~v~~l~~sp~~-~l~tgs-------~Dg~I~vWd~~~~ 392 (394)
.+..++++| + .+++.+ .+..|++|++.+.
T Consensus 242 ~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 242 NVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp CEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred CcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 688999999 5 333332 3458999997653
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.26 E-value=7.8e-09 Score=103.05 Aligned_cols=282 Identities=10% Similarity=0.038 Sum_probs=178.1
Q ss_pred cccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcC--C
Q 016134 85 LWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCG--E 162 (394)
Q Consensus 85 ~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~--~ 162 (394)
..+++.+++.++.++|.+++..... ...|. .+..+. ++|++.++..+. .++.|.+||+. +
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~-----------i~~g~--~p~~v~-~SpDGr~lyv~~----~dg~V~viD~~~~t 229 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTV-----------LDTGY--AVHISR-LSASGRYLFVIG----RDGKVNMIDLWMKE 229 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEE-----------EECSS--CEEEEE-ECTTSCEEEEEE----TTSEEEEEETTSSS
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEE-----------EeCCC--CccceE-ECCCCCEEEEEc----CCCeEEEEECCCCC
Confidence 3456677889999999998875431 11222 344666 999999877554 34599999995 5
Q ss_pred CceEEEEecccCCCeEEEEec----CCCCEEEEEeCCC-c--eeecCCCcEEEecC------------CCCcEEEEEEcC
Q 016134 163 GLTMLAKLEGHEKAVSGIALP----LRSDKLFSGSRDG-T--AWNIESSAEFSLDG------------PVGEVYSMVVAN 223 (394)
Q Consensus 163 ~~~~~~~l~~h~~~V~~l~~s----~~~~~l~sgs~Dg-~--vWd~~~~~~~~~~~------------~~~~v~~l~~~~ 223 (394)
. +.+.++.... ....++|+ |||++++++.... . |+|..+.+.+.... ....+..+..++
T Consensus 230 ~-~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~ 307 (567)
T 1qks_A 230 P-TTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH 307 (567)
T ss_dssp C-CEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS
T ss_pred C-cEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcC
Confidence 4 6666666533 45789999 6999999887764 3 69998888763211 022466666665
Q ss_pred C--EEEEEecC--------------------CCCCCEEEEEec--CCeEEEEe-CCCeEEEEeCCCCceeEEEcC-----
Q 016134 224 E--MLFAGAQD--------------------GHTRPVTCLAVG--RSRLCSGS-MDNTIRVWELDTLEPVMTLND----- 273 (394)
Q Consensus 224 ~--~l~~~~~~--------------------~h~~~V~~l~~~--~~~l~sgs-~Dg~V~iwd~~~~~~~~~~~~----- 273 (394)
+ .+++...+ ........+.|+ +.+|+++. .+++|.++|+++++.+..+..
T Consensus 308 ~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 308 YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp SSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred CCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 4 22222211 112234456676 56665554 688999999999998777654
Q ss_pred CCCCcEEEEEc---CCEEEEEe-CCCcEEEEEeCC-------CceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC--
Q 016134 274 HTDAPMSLLCW---DQFLLSCS-LDHTIKVWFATG-------RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN-- 340 (394)
Q Consensus 274 h~~~v~~l~~~---~~~l~s~s-~Dg~i~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~-- 340 (394)
|.+.-..+ ++ +...++.. .+++|.++|... .+.++.+..... ..+ .+..+|+++ .|.+...
T Consensus 388 hpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~--g~~--~i~~~p~~~-~l~v~~~~~ 461 (567)
T 1qks_A 388 HPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG--GSL--FIKTHPNSQ-YLYVDATLN 461 (567)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS--CCC--CEECCTTCS-EEEEECTTC
T ss_pred CCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC--CCE--EEEeCCCCC-eEEEecCCC
Confidence 43322222 23 23444443 468999999887 455555554321 111 122489999 4554442
Q ss_pred -----CCeEEEEECCCC-----cee-EEEe---------cCCcEEEEEECCCC-EEEEE--e---CCCeEEEEeCCCC
Q 016134 341 -----DNTVHLYELPSF-----MER-GRIF---------SKHEVRVIEIGPDK-LFFTG--D---GAGMLGVWKLLAK 392 (394)
Q Consensus 341 -----dg~I~iwd~~~~-----~~~-~~~~---------~~~~v~~l~~sp~~-~l~tg--s---~Dg~I~vWd~~~~ 392 (394)
..+|.++|+.+. ... ..+. ....+..+.|+|+| .+..+ + .++.|.|+|..+.
T Consensus 462 ~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 462 PEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp SSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 359999999876 222 2332 14568999999999 44443 2 3789999997763
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.24 E-value=1.9e-08 Score=95.15 Aligned_cols=256 Identities=8% Similarity=-0.100 Sum_probs=157.6
Q ss_pred cccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCee------cCCCCCeEEEEEcCCCceEEE
Q 016134 95 IPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCV------RGDECRFLHSWFCGEGLTMLA 168 (394)
Q Consensus 95 ~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~------~g~~~~~i~iWd~~~~~~~~~ 168 (394)
++.++|.+++..... ...|.. . .+. ++|++.++..... .|..+..|.+||..+. +.+.
T Consensus 48 ~v~v~D~~t~~~~~~-----------i~~g~~-p--~i~-~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~-~~~~ 111 (373)
T 2mad_H 48 QQWVLDAGSGSILGH-----------VNGGFL-P--NPV-AAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF-LPIA 111 (373)
T ss_pred EEEEEECCCCeEEEE-----------ecCCCC-C--CeE-ECCCCCEEEEEeccccccccCCCCCeEEEEECCCC-cEEE
Confidence 788899888775421 122221 1 455 9999988765442 2344668999999865 5555
Q ss_pred Eeccc-------CCCeEEEEecCCCCEEEEEeCC--Cc--eeecCCCcEEEe-cCCCCcEEEEEEcCCEEEEEecCCCCC
Q 016134 169 KLEGH-------EKAVSGIALPLRSDKLFSGSRD--GT--AWNIESSAEFSL-DGPVGEVYSMVVANEMLFAGAQDGHTR 236 (394)
Q Consensus 169 ~l~~h-------~~~V~~l~~s~~~~~l~sgs~D--g~--vWd~~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~~~h~~ 236 (394)
++.-- ...-..++|+|||++|+.+... .. ++| ++++.+.. .... .
T Consensus 112 ~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~----------------------~ 168 (373)
T 2mad_H 112 DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP----------------------T 168 (373)
T ss_pred EEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC----------------------c
Confidence 44321 1234589999999999988753 43 588 87776532 2111 1
Q ss_pred CEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEc-----CCCCCc-EEEEEc--CCEEEEEeCCCcEEEEEeCCCce-
Q 016134 237 PVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLN-----DHTDAP-MSLLCW--DQFLLSCSLDHTIKVWFATGRGN- 307 (394)
Q Consensus 237 ~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-----~h~~~v-~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~- 307 (394)
.+.-....+..+++.+.||.+.++|. +++.+.... ....++ ....+. +..++..+..+.+.+.|+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 169 CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 11111222456677788999999999 877663322 111121 112222 34444444678999999865432
Q ss_pred -eeEeeccc--------CCcceEEEEeeECCCCCcEEEEEe---------CCCeEEEEECCCCceeEEEecCCcEEEEEE
Q 016134 308 -LEAAYTHK--------EDNGVLALGGLNDPDGKPVLICAC---------NDNTVHLYELPSFMERGRIFSKHEVRVIEI 369 (394)
Q Consensus 308 -~~~~~~~~--------~~~~~~~~~~~~s~~g~~~l~sgs---------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~ 369 (394)
+..+.... .+.... ...++|+++.++++.. .++.|.++|+.+++.+..+........++|
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~--~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~ 325 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQ--QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISV 325 (373)
T ss_pred EeeeeeecCCcccccceecCceE--eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEE
Confidence 11111100 011111 1235899885555443 136899999999999999987778999999
Q ss_pred CCCC--EEEEEe-CCCeEEEEeCCCC
Q 016134 370 GPDK--LFFTGD-GAGMLGVWKLLAK 392 (394)
Q Consensus 370 sp~~--~l~tgs-~Dg~I~vWd~~~~ 392 (394)
+||+ +++++. .++.|.++|+.+.
T Consensus 326 s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 326 AQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 9998 566666 5899999998764
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.22 E-value=1e-08 Score=102.24 Aligned_cols=214 Identities=14% Similarity=0.069 Sum_probs=141.5
Q ss_pred CCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc--eeecC--CCcEEEecCCCCcEEEEEEcCCEE
Q 016134 151 ECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIE--SSAEFSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 151 ~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~--~~~~~~~~~~~~~v~~l~~~~~~l 226 (394)
.++.|.++|..++ +.+.++... ..+..+.|+||+++|++++.|+. +||+. +++.+........
T Consensus 175 ~~~~V~viD~~t~-~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~----------- 241 (567)
T 1qks_A 175 DAGQIALIDGSTY-EIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE----------- 241 (567)
T ss_dssp TTTEEEEEETTTC-CEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-----------
T ss_pred CCCeEEEEECCCC-eEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-----------
Confidence 4559999999887 666666543 35679999999999999999888 58985 6655422111111
Q ss_pred EEEecCCCCCCEEEEEec------CCeEEEEe-CCCeEEEEeCCCCceeEEEcCC----------CC-CcEEEEEc---C
Q 016134 227 FAGAQDGHTRPVTCLAVG------RSRLCSGS-MDNTIRVWELDTLEPVMTLNDH----------TD-APMSLLCW---D 285 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~------~~~l~sgs-~Dg~V~iwd~~~~~~~~~~~~h----------~~-~v~~l~~~---~ 285 (394)
...++|+ +++++++. .+++|.|+|..+.+.++++... .. .+..+..+ .
T Consensus 242 -----------P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 242 -----------ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp -----------EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred -----------CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 2334444 45555554 4699999999999998877532 12 45666666 3
Q ss_pred CEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec----C
Q 016134 286 QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS----K 361 (394)
Q Consensus 286 ~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~ 361 (394)
.+++....+|.|.++|....+.+........ .... ...|+|++++++++...++.|.++|+.+++.+..+.. .
T Consensus 311 ~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~-~~~~--d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 311 EFIVNVKETGKILLVDYTDLNNLKTTEISAE-RFLH--DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp EEEEEETTTTEEEEEETTCSSEEEEEEEECC-SSEE--EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred EEEEEecCCCeEEEEecCCCccceeeeeecc-cccc--CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 4566666789999999876543332221111 1111 3347999996667777789999999999987766654 2
Q ss_pred CcEEEEE-ECCCC--EEEEEe-CCCeEEEEeCCC
Q 016134 362 HEVRVIE-IGPDK--LFFTGD-GAGMLGVWKLLA 391 (394)
Q Consensus 362 ~~v~~l~-~sp~~--~l~tgs-~Dg~I~vWd~~~ 391 (394)
++-..+. ++|++ .++++. .++.|.++|..+
T Consensus 388 hpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 388 HPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 2111222 57875 445553 568999999876
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=2e-09 Score=97.58 Aligned_cols=240 Identities=9% Similarity=0.019 Sum_probs=154.7
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
|...|+++|.|+.+.+||.++++..-. +..+....+..+. ..|.+..++ +. +..|+.||. +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~-----------~~~~~~~~~~~~~-~~pdG~ilv--s~----~~~V~~~d~-~ 64 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWE-----------YPLEKGWECNSVA-ATKAGEILF--SY----SKGAKMITR-D 64 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEE-----------EECCTTCCCCEEE-ECTTSCEEE--EC----BSEEEEECT-T
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEE-----------eCCCccCCCcCeE-ECCCCCEEE--eC----CCCEEEECC-C
Confidence 677889999999999999998886411 1111112456666 788888877 22 347999998 5
Q ss_pred CceEEEEeccc-CCCeEEEEecCCCCEEEEEeC-CCceeecC-CCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEE
Q 016134 163 GLTMLAKLEGH-EKAVSGIALPLRSDKLFSGSR-DGTAWNIE-SSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVT 239 (394)
Q Consensus 163 ~~~~~~~l~~h-~~~V~~l~~s~~~~~l~sgs~-Dg~vWd~~-~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~ 239 (394)
+ +.+..+..+ ...+.++.+.++|+.|++.+. ++.|+-++ +++.+... .+.. ....+.....
T Consensus 65 G-~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~---------~~~~------~~~~~~~~~~ 128 (276)
T 3no2_A 65 G-RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT---------EFET------GIERPHAQFR 128 (276)
T ss_dssp S-CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE---------EECC------SCSSGGGSCS
T ss_pred C-CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE---------eccC------CCCccccccc
Confidence 6 677777765 357899999999999999887 66654332 44443211 0000 0001111122
Q ss_pred EEEe--cCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeeccc
Q 016134 240 CLAV--GRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK 315 (394)
Q Consensus 240 ~l~~--~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~ 315 (394)
.+.+ +++++++...++.|.+||.+ ++.+.++... ..+.++... ++.++++..+++|..+|..+++.+-.+....
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~ 206 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 206 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGG
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCC
Confidence 2233 47889999999999999998 9999988765 344455555 7788888888899999998888877776432
Q ss_pred CC--cceEEEEeeECCCCCcEEEEEeCC--------CeEEEEEC-CCCceeEEEec
Q 016134 316 ED--NGVLALGGLNDPDGKPVLICACND--------NTVHLYEL-PSFMERGRIFS 360 (394)
Q Consensus 316 ~~--~~~~~~~~~~s~~g~~~l~sgs~d--------g~I~iwd~-~~~~~~~~~~~ 360 (394)
.. ...........++|. ++++.... +..+++++ ++++.+-++..
T Consensus 207 ~~~~~l~~~~~~~~~~~G~-i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 207 IEGVQLFFVAQLFPLQNGG-LYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp SBSCCCSEEEEEEECTTSC-EEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred CCCccccccccceEcCCCC-EEEEeccCccccccccCCceEEEECCCCCEEEEecC
Confidence 11 111122233478888 66665321 23456666 46666666544
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.19 E-value=2.1e-07 Score=84.00 Aligned_cols=249 Identities=7% Similarity=-0.005 Sum_probs=153.3
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCc
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSA 205 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~ 205 (394)
.+..+. +.+.+....+... .+.|.+||.. +......+..+...+.+|++++++.++++...++.| ||.+ ++
T Consensus 16 ~~~~i~-~d~~g~l~v~~~~----~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 16 GPYGIT-VSDKGKVWITQHK----ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp CEEEEE-ECTTSCEEEEETT----TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CccceE-ECCCCCEEEEecC----CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc
Confidence 456666 6666554433221 3479999987 422222333456789999999999988887767765 6654 33
Q ss_pred EEEe--cCCCCcEEEEEEcCC-EEEEEec-C------------------CCCCCEEEEEec--CCeEEEEeCCCeEEEEe
Q 016134 206 EFSL--DGPVGEVYSMVVANE-MLFAGAQ-D------------------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWE 261 (394)
Q Consensus 206 ~~~~--~~~~~~v~~l~~~~~-~l~~~~~-~------------------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd 261 (394)
...+ ......+..+++.++ .++++.. + .+...+..++++ +.++++...++.|.+||
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 168 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRIT 168 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEc
Confidence 3222 224456888888876 4443332 1 123456777776 45555555678999999
Q ss_pred CCCCceeEE-EcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEE
Q 016134 262 LDTLEPVMT-LNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICA 338 (394)
Q Consensus 262 ~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sg 338 (394)
. +++.... +......+..++++ +.+.++...++.|.+||. +++.. .+.......... .+.++++|. ++++.
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~--~i~~~~~g~-l~v~~ 242 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPTPNARPH--AITAGAGID-LWFTE 242 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEE--EEEECSTTC-EEEEE
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCCCCCCce--eEEECCCCC-EEEec
Confidence 9 6665432 33345567888887 566666556789999998 55432 222111112233 334688988 77766
Q ss_pred eCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 339 CNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 339 s~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
..++.|.+||. ++. +..+.. ...+.++++ +++.|..+...+.|..++..++
T Consensus 243 ~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 243 WGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp TTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred cCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 67889999998 443 333322 356899999 8884444444667777776553
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.18 E-value=2.7e-08 Score=90.87 Aligned_cols=241 Identities=9% Similarity=0.001 Sum_probs=139.8
Q ss_pred eeeeccccccccccCC---CeecCCCCCeEEEEEcCCCceEEEEe----cccCCCeEEEEecCC-CCEEEEEeCCCc-ee
Q 016134 129 SKKTTLKNVCCHWLLG---NCVRGDECRFLHSWFCGEGLTMLAKL----EGHEKAVSGIALPLR-SDKLFSGSRDGT-AW 199 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~---~~~~g~~~~~i~iWd~~~~~~~~~~l----~~h~~~V~~l~~s~~-~~~l~sgs~Dg~-vW 199 (394)
...++ +.+.+...++ ...++..++.|.+||..++ +..... .++...+.+++++++ ++++++...++. +|
T Consensus 20 ~~~~~-~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 20 AEGPV-FDKNGDFYIVAPEVEVNGKPAGEILRIDLKTG-KKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp CEEEE-ECTTSCEEEEETTCEETTEECCEEEEECTTTC-CEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred ccCce-ECCCCCEEEEEeccccCCCCCCEEEEEeCCCC-cEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 34455 6666654443 0001122348999998666 322221 135678999999999 766666554443 48
Q ss_pred ecCCCcEEEe-cCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCC---------------CeEEEEe
Q 016134 200 NIESSAEFSL-DGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMD---------------NTIRVWE 261 (394)
Q Consensus 200 d~~~~~~~~~-~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~D---------------g~V~iwd 261 (394)
|.+ ++...+ ..... ......+.+++++ ++++++...+ +.|..||
T Consensus 98 d~~-g~~~~~~~~~~~-----------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~ 159 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSE-----------------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFT 159 (314)
T ss_dssp ETT-SCEEECCSBCTT-----------------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEEC
T ss_pred eCC-CCEEEEEeccCC-----------------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEEC
Confidence 877 655433 21100 0112345666665 4455554444 5677777
Q ss_pred CCCCceeEEEcCCCCCcEEEEEc----C--CEEEEE-eCCCcEEEEEeC-CCcee--eEeecccCCcceEEEEeeECCCC
Q 016134 262 LDTLEPVMTLNDHTDAPMSLLCW----D--QFLLSC-SLDHTIKVWFAT-GRGNL--EAAYTHKEDNGVLALGGLNDPDG 331 (394)
Q Consensus 262 ~~~~~~~~~~~~h~~~v~~l~~~----~--~~l~s~-s~Dg~i~vwd~~-~~~~~--~~~~~~~~~~~~~~~~~~~s~~g 331 (394)
.. ++..... .+......++++ . +.|+.+ ..++.|.+||+. .++.. ..+.............++++++|
T Consensus 160 ~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G 237 (314)
T 1pjx_A 160 TD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN 237 (314)
T ss_dssp TT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred CC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCC
Confidence 66 5543322 233345677776 3 345444 567899999986 33211 11111111100112234568999
Q ss_pred CcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEE-EEeCCCeEEEEeCCCC
Q 016134 332 KPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFF-TGDGAGMLGVWKLLAK 392 (394)
Q Consensus 332 ~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~-tgs~Dg~I~vWd~~~~ 392 (394)
. ++++...++.|.+||..+++.+..+.. ...+.+++++|++ .|+ +...++.|..|++...
T Consensus 238 ~-l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 238 N-LLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp C-EEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred C-EEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8 777777788999999987766555544 3679999999998 454 4456689999998754
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.18 E-value=2.8e-09 Score=110.10 Aligned_cols=244 Identities=13% Similarity=0.028 Sum_probs=146.5
Q ss_pred CCCccceeeeccccccccccCCCeec-CCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc----
Q 016134 123 SGDKSTSKKTTLKNVCCHWLLGNCVR-GDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT---- 197 (394)
Q Consensus 123 ~g~~~~v~~~~~~~~~~~~~~~~~~~-g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~---- 197 (394)
.++...+..+. |+|++.+++..... |+....|++||+.++. .+.. ..+...+..++|+|| +.|+.++.|+.
T Consensus 159 ~~~~~~~~~~~-~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~-~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 159 KDGATALDAWA-ASDDGRLLAYSVQDGGSDWRTVKFVGVADGK-PLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ----EEEEEEE-ECTTSSEEEEEEEETTCSEEEEEEEETTTCC-EEEE-EEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred cCCCEEEEeEE-ECCCCCEEEEEEcCCCCceEEEEEEECCCCC-CCCc-cCCCceeccEEEECC-CEEEEEEecCccccc
Confidence 34444677787 99999999877665 4444689999998873 3322 112223467899999 99988887653
Q ss_pred ------------eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCC-----CeEE
Q 016134 198 ------------AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMD-----NTIR 258 (394)
Q Consensus 198 ------------vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~D-----g~V~ 258 (394)
+|++.++... +.++ .....+...+..+.|+ +++|+..+.+ ..|.
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~----------------~~lv-~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~ 297 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSA----------------DQPV-FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVH 297 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGG----------------CEEE-ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEE
T ss_pred ccccCCCCCEEEEEECCCCchh----------------CEEE-eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEE
Confidence 3555443310 0000 0111233346677776 5666666644 3899
Q ss_pred EEeCCCC--ceeEEEcCCCCCcEEEEEc-CCEEEEEeCC----CcEEEEEeCCC-ceeeEeecccCCcceEEEEeeECCC
Q 016134 259 VWELDTL--EPVMTLNDHTDAPMSLLCW-DQFLLSCSLD----HTIKVWFATGR-GNLEAAYTHKEDNGVLALGGLNDPD 330 (394)
Q Consensus 259 iwd~~~~--~~~~~~~~h~~~v~~l~~~-~~~l~s~s~D----g~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~ 330 (394)
+||+.++ ++...+..+...+....+. ++.|+..+.+ +.|.+||+.++ .....+..+... ....+ .++ +
T Consensus 298 ~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~l~~~--~~~-~ 373 (741)
T 1yr2_A 298 VARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKD-NLESV--GIA-G 373 (741)
T ss_dssp EEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSS-EEEEE--EEE-B
T ss_pred EEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCC-eEEEE--EEE-C
Confidence 9999876 4245565555555544333 7877777653 45999998774 233333333221 12222 233 3
Q ss_pred CCcEEEEEeCCCeEEEEECC-CCceeEEEec--CCcEEEEEECCCC-EEE-EEe---CCCeEEEEeCCCC
Q 016134 331 GKPVLICACNDNTVHLYELP-SFMERGRIFS--KHEVRVIEIGPDK-LFF-TGD---GAGMLGVWKLLAK 392 (394)
Q Consensus 331 g~~~l~sgs~dg~I~iwd~~-~~~~~~~~~~--~~~v~~l~~sp~~-~l~-tgs---~Dg~I~vWd~~~~ 392 (394)
+ .++++...|+..+||.+. ++.....+.. ...+..++++|++ .|+ +.+ ..++|.+||+.+.
T Consensus 374 ~-~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 374 N-RLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp T-EEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred C-EEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 4 488888889988777654 3444444442 4568899999987 333 333 3478999998653
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.10 E-value=1.7e-08 Score=91.88 Aligned_cols=193 Identities=12% Similarity=0.050 Sum_probs=122.3
Q ss_pred EEEecccCCCeEEEEecCCCC-EEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEe
Q 016134 167 LAKLEGHEKAVSGIALPLRSD-KLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAV 243 (394)
Q Consensus 167 ~~~l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~ 243 (394)
+..+..+.....+++|+|+++ +++++..++.| ||.+++ ...+. .+...+.++++
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~----------------------~~~~~~~~l~~ 76 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEM----------------------HPSHHQNGHCL 76 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEE----------------------SSCSSEEEEEE
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEE----------------------CCCCCcceeeE
Confidence 344555677789999999998 77788777774 777766 33322 23445677777
Q ss_pred c--CCeEEEEeCCCeEEEEeCCCCceeEEEcCC----CCCcEEEEEc--CCEEEEEeC-----------------CCcEE
Q 016134 244 G--RSRLCSGSMDNTIRVWELDTLEPVMTLNDH----TDAPMSLLCW--DQFLLSCSL-----------------DHTIK 298 (394)
Q Consensus 244 ~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~s~-----------------Dg~i~ 298 (394)
+ ++++++...++.|.+||.++++........ ...+..++++ +.++++.+. .+.|.
T Consensus 77 ~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~ 156 (296)
T 3e5z_A 77 NKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF 156 (296)
T ss_dssp CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE
T ss_pred CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEE
Confidence 6 556666656789999999888754433221 2345677787 677776321 23444
Q ss_pred EEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC-CCce---eEEEe-cCCcEEEEEECCCC
Q 016134 299 VWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP-SFME---RGRIF-SKHEVRVIEIGPDK 373 (394)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~-~~~~---~~~~~-~~~~v~~l~~sp~~ 373 (394)
.+|.. ..+..+..... ... ..+++|+++ +|++.+.++.|.+|++. ++.. ...+. ....+..++++++|
T Consensus 157 ~~~~~--g~~~~~~~~~~--~~~--gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 157 RLAPD--GTLSAPIRDRV--KPN--GLAFLPSGN-LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG 229 (296)
T ss_dssp EECTT--SCEEEEECCCS--SEE--EEEECTTSC-EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred EECCC--CCEEEeecCCC--CCc--cEEECCCCC-EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence 44433 33333332221 122 234699999 55888888999999997 4443 22231 23456789999999
Q ss_pred EEEEEeCCCeEEEEeCC
Q 016134 374 LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 374 ~l~tgs~Dg~I~vWd~~ 390 (394)
.|..+. ++.|.+|+.+
T Consensus 230 ~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 230 LIWASA-GDGVHVLTPD 245 (296)
T ss_dssp CEEEEE-TTEEEEECTT
T ss_pred CEEEEc-CCeEEEECCC
Confidence 444444 7899999875
No 198
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.08 E-value=7.1e-09 Score=106.49 Aligned_cols=228 Identities=10% Similarity=-0.053 Sum_probs=135.4
Q ss_pred cccccccCCCeecCCC-CCeEEEEEcCCCceEEEEe------cccCCCeEEEEecCCCCEEEEEeCCC-----c--eeec
Q 016134 136 NVCCHWLLGNCVRGDE-CRFLHSWFCGEGLTMLAKL------EGHEKAVSGIALPLRSDKLFSGSRDG-----T--AWNI 201 (394)
Q Consensus 136 ~~~~~~~~~~~~~g~~-~~~i~iWd~~~~~~~~~~l------~~h~~~V~~l~~s~~~~~l~sgs~Dg-----~--vWd~ 201 (394)
.|++.+++-....+.. ...|.+.+...+ +....+ .+|...+..++|+|||++|+.+..++ . +||+
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~ 158 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEG-EARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKV 158 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTS-CCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEET
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCC-CcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEEC
Confidence 3667666544443332 224444444333 221111 23445789999999999998776543 3 6999
Q ss_pred CCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCCCe----------------EEEEeCCCC
Q 016134 202 ESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNT----------------IRVWELDTL 265 (394)
Q Consensus 202 ~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~----------------V~iwd~~~~ 265 (394)
++++..........+..++|+|| ++.|+.++.++. |++|++.++
T Consensus 159 ~tg~~~~~~~~~~~~~~~~wspD--------------------g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~ 218 (710)
T 2xdw_A 159 DGAKELPDVLERVKFSCMAWTHD--------------------GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTD 218 (710)
T ss_dssp TTTEEEEEEEEEECSCCEEECTT--------------------SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSC
T ss_pred CCCCCCcccccCcccceEEEEeC--------------------CCEEEEEEECCccccccccccccCCCCEEEEEECCCC
Confidence 99887643211111223344433 345555555444 999999887
Q ss_pred ce----eEEEcCCCCCcEEEEEc--CCEEEEEeC-----CCcEEEEEeCC------Cc-eeeEeecccCCcceEEEEeeE
Q 016134 266 EP----VMTLNDHTDAPMSLLCW--DQFLLSCSL-----DHTIKVWFATG------RG-NLEAAYTHKEDNGVLALGGLN 327 (394)
Q Consensus 266 ~~----~~~~~~h~~~v~~l~~~--~~~l~s~s~-----Dg~i~vwd~~~------~~-~~~~~~~~~~~~~~~~~~~~~ 327 (394)
+. +.....|...+..+.++ +++|+..+. +..|.+||+.+ +. ....+..+.... .. .+
T Consensus 219 ~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~--~~---~~ 293 (710)
T 2xdw_A 219 QSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE--YD---YV 293 (710)
T ss_dssp GGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC--EE---EE
T ss_pred cccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE--EE---EE
Confidence 62 22223355567788888 777777664 57899999976 32 344444433322 22 25
Q ss_pred CCCCCcEEEEEeCC---CeEEEEECCCCce--eEEE-ecC--CcEEEEEECCCC-EEEEEeCCCeE--EEEeC
Q 016134 328 DPDGKPVLICACND---NTVHLYELPSFME--RGRI-FSK--HEVRVIEIGPDK-LFFTGDGAGML--GVWKL 389 (394)
Q Consensus 328 s~~g~~~l~sgs~d---g~I~iwd~~~~~~--~~~~-~~~--~~v~~l~~sp~~-~l~tgs~Dg~I--~vWd~ 389 (394)
+++|+.+++.+..+ ..|.+||+.++.. ...+ .+. ..+..++|++++ ++++...|+.. .+|++
T Consensus 294 s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~ 366 (710)
T 2xdw_A 294 TNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDL 366 (710)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEET
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEEC
Confidence 78888555555433 3799999987642 2333 332 358889999777 88888888854 55565
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.06 E-value=8.5e-09 Score=106.45 Aligned_cols=238 Identities=11% Similarity=-0.064 Sum_probs=142.0
Q ss_pred CCcccccccccccccCCCC-----CcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecC
Q 016134 75 PPSYNRLKNNLWVSSGSED-----RIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRG 149 (394)
Q Consensus 75 ~~~~~~~~~~~~~~s~s~d-----~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g 149 (394)
..+|++ |+.+|+..+.+ .+|++||++++...... .+...+..+. |+|+ ..++....+.
T Consensus 167 ~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-------------~~~~~~~~~~-wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 167 AWAASD--DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-------------LKWVKFSGLA-WLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEECT--TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-------------EEEEESCCCE-ESTT-SEEEEEECCC
T ss_pred eEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-------------CCCceeccEE-EECC-CEEEEEEecC
Confidence 456776 88888865543 57999999988753100 0001123455 8888 7776555444
Q ss_pred CC----------CCeEEEEEcCCCc---eEEEEecccCCCeEEEEecCCCCEEEEEeCCC-----c--eeecCCC--c-E
Q 016134 150 DE----------CRFLHSWFCGEGL---TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG-----T--AWNIESS--A-E 206 (394)
Q Consensus 150 ~~----------~~~i~iWd~~~~~---~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg-----~--vWd~~~~--~-~ 206 (394)
.. ...|++|++.++. .++.....|...+..+.|+|||++|+..+.++ . +||+.++ + .
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCC
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCccc
Confidence 31 4469999997664 23444344545689999999999998887654 2 5777665 3 3
Q ss_pred EEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeC----CCeEEEEeCCCC--ceeEEEcCCCCCcEE
Q 016134 207 FSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSM----DNTIRVWELDTL--EPVMTLNDHTDAPMS 280 (394)
Q Consensus 207 ~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~----Dg~V~iwd~~~~--~~~~~~~~h~~~v~~ 280 (394)
..+..+.. .....+.-+++.|+..+. ++.|.+||+.++ +....+..+...+..
T Consensus 310 ~~l~~~~~---------------------~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 310 TALIPDLK---------------------AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp EEEECSSS---------------------SCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred EEecCCCC---------------------ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 33222211 111112223666666655 456999999875 333334444455667
Q ss_pred EEEc-CCEEEEEeCCCcEEEEEeC-CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEe---CCCeEEEEECCCCc
Q 016134 281 LLCW-DQFLLSCSLDHTIKVWFAT-GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC---NDNTVHLYELPSFM 353 (394)
Q Consensus 281 l~~~-~~~l~s~s~Dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs---~dg~I~iwd~~~~~ 353 (394)
+.+. +.++++...|+..+||.+. +++....+.. .....+. ...++|+++.++++.+ ..++|++||+.+++
T Consensus 369 ~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~--~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 369 VGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSAS--GLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEE--EEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEE--EeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7777 5577788889988888665 3443433322 1122222 2345788874555443 24789999998875
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.01 E-value=1.2e-07 Score=89.34 Aligned_cols=251 Identities=10% Similarity=0.007 Sum_probs=156.9
Q ss_pred ccccccccCCCeec-CCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----------CCc--eeec
Q 016134 135 KNVCCHWLLGNCVR-GDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----------DGT--AWNI 201 (394)
Q Consensus 135 ~~~~~~~~~~~~~~-g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----------Dg~--vWd~ 201 (394)
..|++.++-..... ...++.|.+.|..+. +.+.++..-..+ . ++++||+++|+.+.. ++. +||.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~-~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAG-RVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTT-EEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCC-eEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 44555554332221 122358999999887 777777655555 4 999999999988762 333 6999
Q ss_pred CCCcEEE-ecCC-------CCcEEEEEEcCC--EEEEEecC---------CCCCCE-EEEEe---------cCCeEEEEe
Q 016134 202 ESSAEFS-LDGP-------VGEVYSMVVANE--MLFAGAQD---------GHTRPV-TCLAV---------GRSRLCSGS 252 (394)
Q Consensus 202 ~~~~~~~-~~~~-------~~~v~~l~~~~~--~l~~~~~~---------~h~~~V-~~l~~---------~~~~l~sgs 252 (394)
.+.+.+. +.-. ...-..+.++++ .++++... ..+..+ ..+.. ....+++.+
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHC 196 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEEC
Confidence 9998763 2111 113446788887 66665432 112221 22221 145677888
Q ss_pred CCCeEEEEeCCC-CceeEEEcCCC----CCcE-EEEEc--CCEEEEEeCCCcEEEEEeCCCc--eeeEee--c-------
Q 016134 253 MDNTIRVWELDT-LEPVMTLNDHT----DAPM-SLLCW--DQFLLSCSLDHTIKVWFATGRG--NLEAAY--T------- 313 (394)
Q Consensus 253 ~Dg~V~iwd~~~-~~~~~~~~~h~----~~v~-~l~~~--~~~l~s~s~Dg~i~vwd~~~~~--~~~~~~--~------- 313 (394)
.||++.+.++.+ ++.+.+...+. .++. ...|. ...++..+.+++|.+.|+.... ....+. .
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccccc
Confidence 999999999976 55533222121 1221 13443 3344446678999999987553 222221 0
Q ss_pred -ccCCcceEEEEeeECCCCCcEEEEEeC---------CCeEEEEECCCCceeEEEecCCcEEEEEECCCC--EEEEE-eC
Q 016134 314 -HKEDNGVLALGGLNDPDGKPVLICACN---------DNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--LFFTG-DG 380 (394)
Q Consensus 314 -~~~~~~~~~~~~~~s~~g~~~l~sgs~---------dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tg-s~ 380 (394)
.......+.+ +++++.++++-.. .+.|.++|+.+++.+..+.....+..|++++|+ +|++. ..
T Consensus 277 ~~p~g~q~~a~----~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 277 WRPGGWQQVAY----HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp EEECSSSCEEE----ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETT
T ss_pred ccCCCcceeeE----CCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCC
Confidence 0112233443 7888855554431 257999999999999999888889999999998 55554 55
Q ss_pred CCeEEEEeCCCC
Q 016134 381 AGMLGVWKLLAK 392 (394)
Q Consensus 381 Dg~I~vWd~~~~ 392 (394)
++.|.++|..+.
T Consensus 353 ~~~VsViD~~t~ 364 (386)
T 3sjl_D 353 DKTLYIHDAESG 364 (386)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 899999998764
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.01 E-value=2.3e-06 Score=77.07 Aligned_cols=211 Identities=12% Similarity=0.085 Sum_probs=137.0
Q ss_pred ecccCCCeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEe--cCCCCcEEEEEEcCC-EEEEEec-C-----------
Q 016134 170 LEGHEKAVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSL--DGPVGEVYSMVVANE-MLFAGAQ-D----------- 232 (394)
Q Consensus 170 l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~--~~~~~~v~~l~~~~~-~l~~~~~-~----------- 232 (394)
+..+...+.+|+++++++++++...++. +||.. ++.... ......+..+++.++ .++.+.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 88 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGI 88 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCc
Confidence 3445678999999999998877666666 47777 554433 234567888888766 3333332 1
Q ss_pred -------CCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEE-EcCCCCCcEEEEEc--CCEEEEEeCCCcEEEE
Q 016134 233 -------GHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMT-LNDHTDAPMSLLCW--DQFLLSCSLDHTIKVW 300 (394)
Q Consensus 233 -------~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vw 300 (394)
.....+.+++++ +.++++...++.|.+||. +++.... +..+...+..+++. +.++++...++.|..|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 123456777776 455565566889999998 5554332 23345568888888 5566666567899999
Q ss_pred EeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCC-EEE
Q 016134 301 FATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDK-LFF 376 (394)
Q Consensus 301 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~-~l~ 376 (394)
|. +++... +.......... .+.+++++. ++++...++.|.+||. +++... +.. ...+.++++++++ +++
T Consensus 168 ~~-~g~~~~-~~~~~~~~~~~--~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 168 TE-SGDITE-FKIPTPASGPV--GITKGNDDA-LWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp CT-TCCEEE-EECSSTTCCEE--EEEECTTSS-EEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEE
T ss_pred cC-CCcEEE-eeCCCCCCcce--eEEECCCCC-EEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEE
Confidence 98 544332 21111112222 334688888 7777667889999999 665432 322 3569999999999 555
Q ss_pred EEeCCCeEEEEeC
Q 016134 377 TGDGAGMLGVWKL 389 (394)
Q Consensus 377 tgs~Dg~I~vWd~ 389 (394)
+...++.|.+||.
T Consensus 241 ~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 241 TEWGANKIGRLTS 253 (299)
T ss_dssp EETTTTEEEEEET
T ss_pred eccCCceEEEECC
Confidence 5557788999986
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.97 E-value=1.2e-07 Score=84.66 Aligned_cols=189 Identities=15% Similarity=0.084 Sum_probs=118.4
Q ss_pred CeEEEEecCCCCEEE-EEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEE
Q 016134 176 AVSGIALPLRSDKLF-SGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCS 250 (394)
Q Consensus 176 ~V~~l~~s~~~~~l~-sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~s 250 (394)
...+|++++++++++ +...++.| ||..+....... ..+...+.+++++ ++++++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~---------------------~~~~~~p~~i~~~~~g~l~v~ 83 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP---------------------FNGLYQPQGLAVDGAGTVYVT 83 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC---------------------CCSCCSCCCEEECTTCCEEEE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe---------------------eCCcCCcceeEECCCCCEEEE
Confidence 778999999998777 44566665 554433322110 0122345667776 454444
Q ss_pred EeCCCeEEEEeCCCCceeEEEc-CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeE
Q 016134 251 GSMDNTIRVWELDTLEPVMTLN-DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLN 327 (394)
Q Consensus 251 gs~Dg~V~iwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (394)
.. ++.|.+||...... ..+. .....+..++++ +.++++...++.|.+|+..+................++ +
T Consensus 84 ~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~----~ 157 (270)
T 1rwi_B 84 DF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVA----V 157 (270)
T ss_dssp ET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEE----E
T ss_pred cC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEE----E
Confidence 44 88999999876543 3333 233567889887 66666666788999997554332221111111122233 4
Q ss_pred CCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 328 DPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 328 s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
++++. ++++...++.|.+||............ ...+..++++++| ++++...++.|.+|+....
T Consensus 158 ~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 158 DNSGN-VYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp CTTCC-EEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred eCCCC-EEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 88898 788777788999999887654432222 3568999999998 6666667889999997643
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.96 E-value=2.3e-06 Score=77.10 Aligned_cols=228 Identities=11% Similarity=0.007 Sum_probs=139.2
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCc
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSA 205 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~ 205 (394)
....+. ..+.+....+.. .++.|.+||.. +......+..+...+.+|+++++++++++...++.| +|.. ++
T Consensus 21 ~p~~i~-~d~~g~l~v~~~----~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 21 GPYGIT-SSEDGKVWFTQH----KANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CEEEEE-ECTTSCEEEEET----TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred Ccceee-ECCCCCEEEEcC----CCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 344555 555554333222 23489999987 422222333445789999999999888877666665 5555 43
Q ss_pred EEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeE-EEcCCCCCcEEEE
Q 016134 206 EFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVM-TLNDHTDAPMSLL 282 (394)
Q Consensus 206 ~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~-~~~~h~~~v~~l~ 282 (394)
...+... .....+.+++++ +.++++...++.|..+|.. ++... .+......+..+.
T Consensus 94 ~~~~~~~--------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~ 152 (300)
T 2qc5_A 94 FTEYPLP--------------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFIT 152 (300)
T ss_dssp EEEEECS--------------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEE
T ss_pred eEEecCC--------------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEE
Confidence 3221110 122456777776 4555555557899999987 55442 2333456678888
Q ss_pred Ec--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec
Q 016134 283 CW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS 360 (394)
Q Consensus 283 ~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 360 (394)
+. +++.++...++.|..+|. +++... +.......... .+.+++++. ++++....+.|.+||. ++........
T Consensus 153 ~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~--~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~ 226 (300)
T 2qc5_A 153 LGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPV--GITSGNDGA-LWFVEIMGNKIGRITT-TGEISEYDIP 226 (300)
T ss_dssp ECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEE--EEEECTTSS-EEEEETTTTEEEEECT-TCCEEEEECS
T ss_pred ECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcc--eEEECCCCC-EEEEccCCCEEEEEcC-CCcEEEEECC
Confidence 87 666665555788999988 444332 22111112222 334688887 7776666788999998 4443332221
Q ss_pred --CCcEEEEEECCCC-EEEEEeCCCeEEEEeC
Q 016134 361 --KHEVRVIEIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 361 --~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
...+.++++++++ ++++...++.|..|+.
T Consensus 227 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 227 TPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 4568999999999 5555556788999886
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.96 E-value=4.8e-07 Score=86.56 Aligned_cols=233 Identities=11% Similarity=0.005 Sum_probs=141.5
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCC--ce--eecCC
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDG--TA--WNIES 203 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg--~v--Wd~~~ 203 (394)
....++ +.+.+...++.. ....|++||..++ ........ ..... ++|+++++.|+.+..++ .| ++...
T Consensus 132 ~P~~la-~d~~g~lyv~d~----~~~~I~~id~~~g-~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 132 YMWGIA-AVGNNTVLAYQR----DDPRVRLISVDDN-KVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CEEEEE-ECSTTEEEEEET----TTTEEEEEETTTT-EEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CceEEE-EeCCCCEEEEec----CCCcEEEEECCCC-EEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 445555 666665443322 2348999999876 44444333 33334 99999999999998876 44 44443
Q ss_pred CcEEEecCCCCcEEEEEEcCCEEEEEecCC-CCCCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEE----EcCCCC
Q 016134 204 SAEFSLDGPVGEVYSMVVANEMLFAGAQDG-HTRPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMT----LNDHTD 276 (394)
Q Consensus 204 ~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~-h~~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~----~~~h~~ 276 (394)
+...... +.... ....+.+++++ +..|+.+..++.|+.||..++..... ..++..
T Consensus 204 ~~~~~~~------------------g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~ 265 (409)
T 3hrp_A 204 GWAPTRI------------------GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLG 265 (409)
T ss_dssp TTCEEEE------------------EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCC
T ss_pred CceeEEe------------------eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCC
Confidence 3321110 00001 23445566776 35566677788999999987664322 222222
Q ss_pred Cc-E-EEEEc--CC-EEEEEeCCCcEEEEEeCCCceeeEeecccCC-----------cceEEEEeeECCCCCcEEEEEe-
Q 016134 277 AP-M-SLLCW--DQ-FLLSCSLDHTIKVWFATGRGNLEAAYTHKED-----------NGVLALGGLNDPDGKPVLICAC- 339 (394)
Q Consensus 277 ~v-~-~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~-----------~~~~~~~~~~s~~g~~~l~sgs- 339 (394)
.- . .++++ +. ++++-..++.|+.||.... ...+...... .......++++++|. ++++-.
T Consensus 266 ~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~ 342 (409)
T 3hrp_A 266 TNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGF 342 (409)
T ss_dssp CSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETT
T ss_pred CCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCC
Confidence 22 3 88887 34 4555556788999987543 3333222100 001122345699998 888888
Q ss_pred CCCeEEEEECCCCceeEEEec---------------CCcEEEEEECCCC-EEEEEeCCCeEEEEeC
Q 016134 340 NDNTVHLYELPSFMERGRIFS---------------KHEVRVIEIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 340 ~dg~I~iwd~~~~~~~~~~~~---------------~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
.++.|+.|++.++........ -.....|++++++ ++++-..+++|+.+++
T Consensus 343 ~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 343 KGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 899999999887764333221 1358999999999 7777778889988875
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.95 E-value=7.9e-07 Score=80.15 Aligned_cols=254 Identities=9% Similarity=-0.005 Sum_probs=147.1
Q ss_pred cCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEE
Q 016134 89 SGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLA 168 (394)
Q Consensus 89 s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~ 168 (394)
+...+..+.++|.+ +.+.... .......+..+. +.+.+....+.. ..+.|..+|.. +.....
T Consensus 36 ~~~~~~~v~~~~~~-~~~~~~~-----------~~~~~~~~~~i~-~~~~g~l~v~~~----~~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 36 TQHKANKISSLDQS-GRIKEFE-----------VPTPDAKVMCLI-VSSLGDIWFTEN----GANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp EETTTTEEEEECTT-SCEEEEE-----------CSSTTCCEEEEE-ECTTSCEEEEET----TTTEEEEECTT-SCEEEE
T ss_pred EcCCCCeEEEECCC-CceEEEE-----------CCCCCCcceeEE-ECCCCCEEEEec----CCCeEEEECCC-CCeEEe
Confidence 33456777788876 4432100 011123455666 556554333221 23478899887 422223
Q ss_pred EecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--
Q 016134 169 KLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-- 244 (394)
Q Consensus 169 ~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-- 244 (394)
.+......+.++++.++++++++...++.| +|.+ ++...... ......+.+++++
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--------------------~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--------------------PNKGSYPAFITLGSD 156 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--------------------SSTTCCEEEEEECTT
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--------------------CCCCCCceeEEECCC
Confidence 333345779999999999888877666665 5554 43332210 0123456777775
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEE-EcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceE
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMT-LNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVL 321 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~-~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 321 (394)
++++++...++.|.++|. +++.... +..+...+..+.++ +.+.++....+.|.+||. +++... ...........
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~ 233 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTPNARPH 233 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEE
T ss_pred CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCCCCCce
Confidence 455555555788999998 5554432 22344567888887 555555555678999997 333322 21111112222
Q ss_pred EEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEE-Ee-cCCcEEEEEECCCCEEEEEeCCCeEEEEeC
Q 016134 322 ALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGR-IF-SKHEVRVIEIGPDKLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~-~~-~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~ 389 (394)
.+.++++|. ++++...++.|..||. ++..... +. ....+.++++.++|.|..++.. .|..++.
T Consensus 234 --~i~~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~i~~~~p 298 (300)
T 2qc5_A 234 --AITAGKNSE-IWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALKC-KIGKLNL 298 (300)
T ss_dssp --EEEECSTTC-EEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECSS-EEEEEEE
T ss_pred --EEEECCCCC-EEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEccC-ceEEeCC
Confidence 334688988 7776666789999998 4433322 22 1356889999999955555544 6766664
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.94 E-value=6.6e-09 Score=98.16 Aligned_cols=140 Identities=11% Similarity=0.069 Sum_probs=101.2
Q ss_pred CEEEEEec--CCeEEEEeCCCeEEEEeCCCCc-----------eeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeC
Q 016134 237 PVTCLAVG--RSRLCSGSMDNTIRVWELDTLE-----------PVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFAT 303 (394)
Q Consensus 237 ~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~ 303 (394)
.++.|+++ ..++++|+.+ .+++|+++..+ ...... +.. |+.|+|++..|+++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~-lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE-IPD-VIFVCFHGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE-CTT-EEEEEEETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee-CCC-eeEEEECCCEEEEE-cCCcEEEEEch
Confidence 46666776 6788888887 46669875332 222333 556 99999988888888 88999999998
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCCEEEEEeCCCe
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGM 383 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~~l~tgs~Dg~ 383 (394)
+.........+... +..+. +.+. -++++..||.|.+||+.++.... ....|++++|+|+| ++.|..||.
T Consensus 115 sl~~~~~~~~~~~~--v~~i~--~~~p---~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~ 183 (388)
T 1xip_A 115 ELSEFRTVTSFEKP--VFQLK--NVNN---TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRS 183 (388)
T ss_dssp STTCEEEEEECSSC--EEEEE--ECSS---EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSC
T ss_pred hhhccCccceeecc--eeeEE--ecCC---CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCc
Confidence 76655555444433 33322 2322 27778899999999999877643 34589999999999 678999999
Q ss_pred EEEEeCCC
Q 016134 384 LGVWKLLA 391 (394)
Q Consensus 384 I~vWd~~~ 391 (394)
+++|+...
T Consensus 184 i~~~~~~~ 191 (388)
T 1xip_A 184 FQSFAWRN 191 (388)
T ss_dssp EEEEEEET
T ss_pred EEEEcCCC
Confidence 99997654
No 207
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.93 E-value=2.5e-07 Score=87.06 Aligned_cols=226 Identities=9% Similarity=-0.024 Sum_probs=136.9
Q ss_pred CCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcEEEecCCCCcE------EEEEEc
Q 016134 151 ECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEV------YSMVVA 222 (394)
Q Consensus 151 ~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v------~~l~~~ 222 (394)
.++.|..+|..++ +.+..+............ .+..++.++.++.| +|.++++.+-.......+ ......
T Consensus 111 ~~g~l~a~d~~tG-~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 111 EKAQVYALNTSDG-TVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp TTSEEEEEETTTC-CEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred CCCEEEEEECCCC-CEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 3458999999888 444444433222212222 24577778888873 777777765221111111 111222
Q ss_pred CCEEEEEecCC-------CCCC-EEE---------------------EEecCCeEEEEeCCCeEEEEeCCCCceeEEEcC
Q 016134 223 NEMLFAGAQDG-------HTRP-VTC---------------------LAVGRSRLCSGSMDNTIRVWELDTLEPVMTLND 273 (394)
Q Consensus 223 ~~~l~~~~~~~-------h~~~-V~~---------------------l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~ 273 (394)
.+.++++..++ .++. ++. ....++.++.++.++.|..+|.++++.+.....
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 33444443321 1111 111 112256788888899999999999998876652
Q ss_pred CCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccC-CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCC
Q 016134 274 HTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKE-DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSF 352 (394)
Q Consensus 274 h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~ 352 (394)
.....+...+..++.++.++.|..+|..+++.+-....... ......+ .+. .|+.++.+|.|.++|..++
T Consensus 268 --~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~------~~~-~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 268 --GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL------YNG-NLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp --CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE------ETT-EEEEECTTSEEEEEETTTC
T ss_pred --CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE------ECC-EEEEEeCCCeEEEEECCCC
Confidence 34556666788899999999999999998876554432111 1111222 123 5777888999999999999
Q ss_pred ceeEEEec-CCcEEEEEECCCCEEEEEeCCCeEEEEe
Q 016134 353 MERGRIFS-KHEVRVIEIGPDKLFFTGDGAGMLGVWK 388 (394)
Q Consensus 353 ~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg~I~vWd 388 (394)
+.+..... ...+.......++.|+.++.+|.|..|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 339 RFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CEEEEEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred cEEEEEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 88877655 3333221112256888899999999987
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.90 E-value=3.3e-07 Score=93.78 Aligned_cols=241 Identities=15% Similarity=0.097 Sum_probs=144.2
Q ss_pred CCCCccceeeeccccccccccCCCee-cCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc---
Q 016134 122 ESGDKSTSKKTTLKNVCCHWLLGNCV-RGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT--- 197 (394)
Q Consensus 122 ~~g~~~~v~~~~~~~~~~~~~~~~~~-~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--- 197 (394)
..++...+..+. ++|++.++|-... .|+....|++||+.++......+.+. ....++|+ |++.|+.++.+..
T Consensus 124 a~~~~~~l~~~~-~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 124 SPDGTTALDQLS-FSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp STTSCCEEEEEE-ECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC--
T ss_pred cCCCcEEEEEEE-ECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccc
Confidence 345556788888 9999999885443 45556799999999884332233221 13567899 9999998887731
Q ss_pred ------------eeecCCCcE--EEecCCCCcEEEEEEcCCEEEEEecCC-CCCCEEEEEec--CCeEE-EEe---CCCe
Q 016134 198 ------------AWNIESSAE--FSLDGPVGEVYSMVVANEMLFAGAQDG-HTRPVTCLAVG--RSRLC-SGS---MDNT 256 (394)
Q Consensus 198 ------------vWd~~~~~~--~~~~~~~~~v~~l~~~~~~l~~~~~~~-h~~~V~~l~~~--~~~l~-sgs---~Dg~ 256 (394)
+|++.+... ..+.. ... |...+..+.|+ +++|+ +.+ .+..
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~-------------------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 260 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFG-------------------AIPAQHHRYVGATVTEDDRFLLISAANSTSGNR 260 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEES-------------------CSGGGCCSEEEEEECTTSCEEEEEEESSSSCCE
T ss_pred cccccCCCcEEEEEECCCCcccceEEEe-------------------cCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcE
Confidence 355555432 11110 011 23334555565 44443 322 2358
Q ss_pred EEEEeCCCCc-eeEEEcCCCCCcEEEE-EcCCEEE-EEeCC---CcEEEEEeCCCce--eeEeecccCCcceEEEEeeEC
Q 016134 257 IRVWELDTLE-PVMTLNDHTDAPMSLL-CWDQFLL-SCSLD---HTIKVWFATGRGN--LEAAYTHKEDNGVLALGGLND 328 (394)
Q Consensus 257 V~iwd~~~~~-~~~~~~~h~~~v~~l~-~~~~~l~-s~s~D---g~i~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~s 328 (394)
|.++|+.+++ ....+..+........ ..++.|+ ....+ +.|..+|+.++.. ...+..+... .+ .++
T Consensus 261 i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~----~~s 334 (693)
T 3iuj_A 261 LYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ--VL----TVH 334 (693)
T ss_dssp EEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS--CE----EEE
T ss_pred EEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC--EE----EEE
Confidence 9999998764 4556666666665542 3355544 44443 5799999887643 2344434332 22 357
Q ss_pred CCCCcEEEEEeCCC--eEEEEECCCCceeEEEec--CCcEEEEEECCCC-EEEEEeCC----CeEEEEeCCCC
Q 016134 329 PDGKPVLICACNDN--TVHLYELPSFMERGRIFS--KHEVRVIEIGPDK-LFFTGDGA----GMLGVWKLLAK 392 (394)
Q Consensus 329 ~~g~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~-~l~tgs~D----g~I~vWd~~~~ 392 (394)
++++.++++...++ .|++|++... ....+.. ...+..+.+++++ .|+....+ +.|..||+.+.
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred EECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 78885555555555 6889988754 3344432 4467788888887 43333333 78889988654
No 209
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.89 E-value=2.5e-06 Score=76.17 Aligned_cols=203 Identities=11% Similarity=0.028 Sum_probs=137.7
Q ss_pred eEEEEecccCC--CeEEEEecCCCCEEEEEeCC--Cc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCE
Q 016134 165 TMLAKLEGHEK--AVSGIALPLRSDKLFSGSRD--GT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPV 238 (394)
Q Consensus 165 ~~~~~l~~h~~--~V~~l~~s~~~~~l~sgs~D--g~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V 238 (394)
+.+.++ .|.. ....|+|++++.++++.+.. +. +.|+.+++.+...... . ....
T Consensus 10 ~vv~~~-p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~-------------------~-~~fg 68 (266)
T 2iwa_A 10 EVLNEF-PHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD-------------------D-SYFG 68 (266)
T ss_dssp EEEEEE-ECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC-------------------T-TCCE
T ss_pred eEEEEE-ECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC-------------------C-Ccce
Confidence 455555 3443 36899999987555555543 33 5899988876321110 1 1122
Q ss_pred EEEEecCCeEEEE-eCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCC
Q 016134 239 TCLAVGRSRLCSG-SMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317 (394)
Q Consensus 239 ~~l~~~~~~l~sg-s~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~ 317 (394)
..+++.++.|+.. -.++.|.++|..+.+.+.++......-..++.+++.|+++..+++|.++|..+.+.+..+......
T Consensus 69 eGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 69 EGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp EEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred EEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC
Confidence 3455666555444 457899999999999999886331333567777776666667899999999888777776643321
Q ss_pred c---ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC--------------CcEEEEEECCCC--EEEEE
Q 016134 318 N---GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK--------------HEVRVIEIGPDK--LFFTG 378 (394)
Q Consensus 318 ~---~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--------------~~v~~l~~sp~~--~l~tg 378 (394)
. ....+. +. ++. +++....++.|.+.|..+++.+..+... ...+.|+++|++ +++++
T Consensus 149 ~p~~~~nele--~~-dg~-lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 149 HRVIRLNELE--YI-NGE-VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EECCCEEEEE--EE-TTE-EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred cccccceeEE--EE-CCE-EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 1 122222 34 565 6666667899999999999998888642 356899999998 78888
Q ss_pred eCCCeEEEEeCCCC
Q 016134 379 DGAGMLGVWKLLAK 392 (394)
Q Consensus 379 s~Dg~I~vWd~~~~ 392 (394)
.....|.+.++.+.
T Consensus 225 k~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 225 KLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCSEEEEEEEEEC
T ss_pred CCCCeEEEEEEecc
Confidence 88899988887654
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.87 E-value=9.5e-07 Score=80.42 Aligned_cols=205 Identities=12% Similarity=0.064 Sum_probs=118.7
Q ss_pred CCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 152 CRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 152 ~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.+.|+.||..++.. ..+ .....+.+++++++++++++ ..++. +||.++++...+.....
T Consensus 34 ~~~i~~~d~~~~~~--~~~-~~~~~~~~i~~~~dG~l~v~-~~~~l~~~d~~~g~~~~~~~~~~---------------- 93 (297)
T 3g4e_A 34 AKKVCRWDSFTKQV--QRV-TMDAPVSSVALRQSGGYVAT-IGTKFCALNWKEQSAVVLATVDN---------------- 93 (297)
T ss_dssp TTEEEEEETTTCCE--EEE-ECSSCEEEEEEBTTSSEEEE-ETTEEEEEETTTTEEEEEEECCT----------------
T ss_pred CCEEEEEECCCCcE--EEE-eCCCceEEEEECCCCCEEEE-ECCeEEEEECCCCcEEEEEecCC----------------
Confidence 34899999987633 222 24578999999999995555 44444 58887776543221100
Q ss_pred cCCCCCCEEEEEec--CCeEEEEeC---------CCeEEEEeCCC-CceeEEEcCCCCCcEEEEEc--CCEE-EEEeCCC
Q 016134 231 QDGHTRPVTCLAVG--RSRLCSGSM---------DNTIRVWELDT-LEPVMTLNDHTDAPMSLLCW--DQFL-LSCSLDH 295 (394)
Q Consensus 231 ~~~h~~~V~~l~~~--~~~l~sgs~---------Dg~V~iwd~~~-~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~Dg 295 (394)
+.....+..++++ ++++++... ...-.||.+.. ++... +..+......++|+ ++.| ++.+.++
T Consensus 94 -~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 94 -DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp -TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred -CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCC
Confidence 0112234556665 343333211 12234444432 33322 22233456788887 5655 4555678
Q ss_pred cEEEEEeC--CCcee--eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC-CcEEEEEEC
Q 016134 296 TIKVWFAT--GRGNL--EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK-HEVRVIEIG 370 (394)
Q Consensus 296 ~i~vwd~~--~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~v~~l~~s 370 (394)
.|.+||+. ++... ..+..... .....-.++++++|. +.++....+.|.+||..+++.+..+... ..+++++|.
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred cEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEe
Confidence 99999984 33321 11211111 011122334689997 7777777889999999988888877764 679999998
Q ss_pred -CCC--EEEEEeC
Q 016134 371 -PDK--LFFTGDG 380 (394)
Q Consensus 371 -p~~--~l~tgs~ 380 (394)
|++ ++++...
T Consensus 250 g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 250 GKNYSEMYVTCAR 262 (297)
T ss_dssp SGGGCEEEEEEBC
T ss_pred CCCCCEEEEEcCC
Confidence 776 4455443
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.87 E-value=7.4e-07 Score=85.24 Aligned_cols=233 Identities=10% Similarity=0.012 Sum_probs=135.6
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----------CCc--eeecCCCcEEE-ecCC-------
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----------DGT--AWNIESSAEFS-LDGP------- 212 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----------Dg~--vWd~~~~~~~~-~~~~------- 212 (394)
+.|.+.|..+. +.+.++.--..+ .++++||+++|+.+.. ++. ++|..+++.+. +.-.
T Consensus 99 ~~VsVID~~t~-~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~ 175 (426)
T 3c75_H 99 TQQFVIDGSTG-RILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLV 175 (426)
T ss_dssp EEEEEEETTTT-EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CeEEEEECCCC-EEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccccc
Confidence 58999999887 777777655556 8999999999988863 333 68988888763 2111
Q ss_pred CCcEEEEEEcCC--EEEEEecC---------CCCCCE-EEEEe---------cCCeEEEEeCCCeEEEEeCCCCceeEEE
Q 016134 213 VGEVYSMVVANE--MLFAGAQD---------GHTRPV-TCLAV---------GRSRLCSGSMDNTIRVWELDTLEPVMTL 271 (394)
Q Consensus 213 ~~~v~~l~~~~~--~l~~~~~~---------~h~~~V-~~l~~---------~~~~l~sgs~Dg~V~iwd~~~~~~~~~~ 271 (394)
......+.++++ .++++... ..+..+ ..+.. ....+++.+.||++.+.++.+++.....
T Consensus 176 g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~ 255 (426)
T 3c75_H 176 GTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTN 255 (426)
T ss_dssp SCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEe
Confidence 112234556655 44444321 011111 11111 0233455566666666666544444221
Q ss_pred ----cCCCCCc-EEEEEc--CCEEEEEeCCCcEEEEEeCCCceee--Eeec----------ccCCcceEEEEeeECCCCC
Q 016134 272 ----NDHTDAP-MSLLCW--DQFLLSCSLDHTIKVWFATGRGNLE--AAYT----------HKEDNGVLALGGLNDPDGK 332 (394)
Q Consensus 272 ----~~h~~~v-~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~--~~~~----------~~~~~~~~~~~~~~s~~g~ 332 (394)
.....++ ..+.+. +..++..+..+.|.+.|+....... .+.. .......+ .++|+++
T Consensus 256 ~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~v----a~s~dg~ 331 (426)
T 3c75_H 256 TEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQT----AYHRQSD 331 (426)
T ss_dssp CCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCE----EEEGGGT
T ss_pred eeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceee----EEcCCCC
Confidence 1111111 012223 4444444556677777765432111 0000 00001112 3588888
Q ss_pred cEEEEEe---------CCCeEEEEECCCCceeEEEecCCcEEEEEECCCC--EEEEEe-CCCeEEEEeCCCC
Q 016134 333 PVLICAC---------NDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--LFFTGD-GAGMLGVWKLLAK 392 (394)
Q Consensus 333 ~~l~sgs---------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tgs-~Dg~I~vWd~~~~ 392 (394)
.++++.. .++.|.++|+.+.+.+..+........++|+||+ ++++.. .++.|.++|+.+.
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 5555533 1357999999999999999877779999999998 677776 5999999998764
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.81 E-value=8.1e-07 Score=81.16 Aligned_cols=219 Identities=12% Similarity=0.028 Sum_probs=128.2
Q ss_pred eeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcE
Q 016134 129 SKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAE 206 (394)
Q Consensus 129 v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~ 206 (394)
..... |.+.+..+.- .+...+.|..|+.... ...+..+...+..++++++|+++++...++.| |+.+ ++.
T Consensus 47 ~egp~-~~~~g~~l~~---~d~~~~~i~~~~~~g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 47 SEGPA-WWEAQRTLVW---SDLVGRRVLGWREDGT---VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEE-EEGGGTEEEE---EETTTTEEEEEETTSC---EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccCCe-EeCCCCEEEE---EECCCCEEEEEeCCCC---EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 34444 7887763321 1223348999988433 34555567789999999999976665555554 5654 443
Q ss_pred EEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEE----EeC-------------CCeEEEEeCCCCce
Q 016134 207 FSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCS----GSM-------------DNTIRVWELDTLEP 267 (394)
Q Consensus 207 ~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~s----gs~-------------Dg~V~iwd~~~~~~ 267 (394)
..+..... ......+.+++++ ++++++ |.. .+.|..||.++++.
T Consensus 119 ~~~~~~~~-----------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 119 HLLVGRYA-----------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp EEEECEET-----------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred EEEEeccC-----------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 22211100 0011234455565 445554 332 25678888776665
Q ss_pred eEEEcCCCCCcEEEEEc--CCEEEEEeCC------CcEEEEEeCCCceeeE---eecc-cCCcceEEEEeeECCCCCcEE
Q 016134 268 VMTLNDHTDAPMSLLCW--DQFLLSCSLD------HTIKVWFATGRGNLEA---AYTH-KEDNGVLALGGLNDPDGKPVL 335 (394)
Q Consensus 268 ~~~~~~h~~~v~~l~~~--~~~l~s~s~D------g~i~vwd~~~~~~~~~---~~~~-~~~~~~~~~~~~~s~~g~~~l 335 (394)
.... .......++|+ ++.|+.+... +.|.+||+.... +.. +... ......+ .++++|. +.
T Consensus 182 ~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi----~~d~~G~-lw 253 (305)
T 3dr2_A 182 QRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGF----CVDRGGW-LW 253 (305)
T ss_dssp EEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSE----EECTTSC-EE
T ss_pred EEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeE----EECCCCC-EE
Confidence 4333 33456788888 6667776655 789999987654 211 1111 1111122 3488998 55
Q ss_pred EEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCe
Q 016134 336 ICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGM 383 (394)
Q Consensus 336 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~ 383 (394)
++. .+ .|.+|+. +++.+..+.....+..++|.+++ .|+.++.++.
T Consensus 254 v~~-~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 254 SSS-GT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp ECC-SS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTEE
T ss_pred Eec-CC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCeE
Confidence 443 44 5999998 46677676665578999999888 7777766643
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.80 E-value=6.4e-07 Score=91.67 Aligned_cols=233 Identities=11% Similarity=0.040 Sum_probs=135.1
Q ss_pred cccccccccccc-----cCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccc--eeeeccccccccccCCCeecC
Q 016134 77 SYNRLKNNLWVS-----SGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKST--SKKTTLKNVCCHWLLGNCVRG 149 (394)
Q Consensus 77 ~~~~~~~~~~~~-----s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~--v~~~~~~~~~~~~~~~~~~~g 149 (394)
+|++ ++.+++ +|+.+.+|++||++++..... +... ...+. |+ ++..++-...+.
T Consensus 135 ~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---------------~~~~~k~~~~~-Ws-Dg~~l~y~~~~~ 195 (693)
T 3iuj_A 135 SFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLET---------------PLKDVKFSGIS-WL-GNEGFFYSSYDK 195 (693)
T ss_dssp EECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---------------EEEEEESCCCE-EE-TTTEEEEEESSC
T ss_pred EECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCcc---------------ccCCceeccEE-Ee-CCCEEEEEEecC
Confidence 5666 777888 666678999999999874310 0001 12344 77 776665444432
Q ss_pred ---------CCCCeEEEEEcCCCc---eEEEEecc-cCCCeEEEEecCCCCEEEEEeCCC----c--eeecCCC--cEEE
Q 016134 150 ---------DECRFLHSWFCGEGL---TMLAKLEG-HEKAVSGIALPLRSDKLFSGSRDG----T--AWNIESS--AEFS 208 (394)
Q Consensus 150 ---------~~~~~i~iWd~~~~~---~~~~~l~~-h~~~V~~l~~s~~~~~l~sgs~Dg----~--vWd~~~~--~~~~ 208 (394)
.....|++|++.++. .++..... |...+..+.|+||+++|+.....+ . +||+.++ +...
T Consensus 196 ~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 196 PDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp CC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred cccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 233469999997663 34444444 666788999999999886544322 2 4676655 2223
Q ss_pred ecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE-EEecCCeE-EEEeC---CCeEEEEeCCCCce--eEEEcCCCCCcEEE
Q 016134 209 LDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC-LAVGRSRL-CSGSM---DNTIRVWELDTLEP--VMTLNDHTDAPMSL 281 (394)
Q Consensus 209 ~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~-l~~~~~~l-~sgs~---Dg~V~iwd~~~~~~--~~~~~~h~~~v~~l 281 (394)
+..+ ...... +...++.| +.... .+.|.++|+.+++. ...+..|...+..+
T Consensus 276 l~~~----------------------~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 333 (693)
T 3iuj_A 276 VQGD----------------------LDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTV 333 (693)
T ss_dssp EECS----------------------SSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEE
T ss_pred EeCC----------------------CCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEE
Confidence 2222 222222 22234443 33333 36899999987654 34566666655555
Q ss_pred EEcCCEEEEEeC-CC--cEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC---CeEEEEECCCCce
Q 016134 282 LCWDQFLLSCSL-DH--TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND---NTVHLYELPSFME 354 (394)
Q Consensus 282 ~~~~~~l~s~s~-Dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d---g~I~iwd~~~~~~ 354 (394)
...++.|+.... ++ .|++||+... ....+.. .....+. ...+++++..++++.+.. ++|..||+.+++.
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~-p~~~~~~--~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGK-RVREVAL-PGLGSVS--GFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSC-EEEEECC-SSSSEEE--ECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCC-eeEEeec-CCCceEE--eeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 555777766655 43 6888888643 3333321 1112222 233567877555554432 7899999987754
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.76 E-value=5.1e-06 Score=79.38 Aligned_cols=189 Identities=10% Similarity=-0.031 Sum_probs=121.1
Q ss_pred CCeEEEEecCCCCEEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEE
Q 016134 175 KAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCS 250 (394)
Q Consensus 175 ~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~s 250 (394)
.....|+|+++++++++...++.| ||.+++....+.... . ... ++|+ ++.|++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~---------------------~-~~~-ia~~~~g~~l~~ 187 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF---------------------K-GGK-PAVTKDKQRVYS 187 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC---------------------C-BCB-CEECTTSSEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC---------------------C-CCc-eeEecCCCcEEE
Confidence 468899999999877776666664 787776654332111 1 111 4555 567777
Q ss_pred EeCCC--eEEEEeCCCCceeEEE----cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeE----eecccCCc
Q 016134 251 GSMDN--TIRVWELDTLEPVMTL----NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEA----AYTHKEDN 318 (394)
Q Consensus 251 gs~Dg--~V~iwd~~~~~~~~~~----~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~----~~~~~~~~ 318 (394)
+..++ .|.++|..++.....+ ......+.+++++ +..|+.+..++.|+.||......... ...... .
T Consensus 188 ~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~-~ 266 (409)
T 3hrp_A 188 IGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLG-T 266 (409)
T ss_dssp EBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCC-C
T ss_pred EecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCC-C
Confidence 77765 7899998765544444 2244567788887 45666677788999999876543221 111111 1
Q ss_pred ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-C---------------CcEEEEEECCCC-EEEEEe-C
Q 016134 319 GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-K---------------HEVRVIEIGPDK-LFFTGD-G 380 (394)
Q Consensus 319 ~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~---------------~~v~~l~~sp~~-~l~tgs-~ 380 (394)
... -.++++|++..++++-..++.|+.|+.... ...+.. . .....+++++++ ++++-. .
T Consensus 267 ~P~-~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 267 NPG-PYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp SSC-CEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred Ccc-ccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 101 022358854448888888899999987643 222222 1 348899999999 777777 7
Q ss_pred CCeEEEEeCC
Q 016134 381 AGMLGVWKLL 390 (394)
Q Consensus 381 Dg~I~vWd~~ 390 (394)
+++|+.|++.
T Consensus 344 ~~~I~~~~~~ 353 (409)
T 3hrp_A 344 GYCLRKLDIL 353 (409)
T ss_dssp TCEEEEEETT
T ss_pred CCEEEEEECC
Confidence 8899999954
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.76 E-value=7.9e-07 Score=90.84 Aligned_cols=81 Identities=14% Similarity=0.037 Sum_probs=55.0
Q ss_pred CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcE--EEEEECC
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEV--RVIEIGP 371 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v--~~l~~sp 371 (394)
++.|+.||+.+++.+-....+..... -.+ ...+. +++.++.|+.|+.||.++++++.++.....+ .-+.|..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~-g~~----~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNG-GTL----STAGN-LVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCC-CEE----EETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccC-ccc----eECCC-EEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEE
Confidence 37799999999887766554332211 122 33555 7888999999999999999999888763332 2355667
Q ss_pred CC--EEEEEeC
Q 016134 372 DK--LFFTGDG 380 (394)
Q Consensus 372 ~~--~l~tgs~ 380 (394)
+| ++++.+.
T Consensus 528 ~G~qyv~~~~G 538 (689)
T 1yiq_A 528 DGEQYVTFMAG 538 (689)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEec
Confidence 88 5555543
No 216
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.75 E-value=2e-06 Score=78.21 Aligned_cols=196 Identities=10% Similarity=0.050 Sum_probs=119.4
Q ss_pred cccCCCeEEEEecCCCCEEEE-------EeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEE
Q 016134 171 EGHEKAVSGIALPLRSDKLFS-------GSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCL 241 (394)
Q Consensus 171 ~~h~~~V~~l~~s~~~~~l~s-------gs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l 241 (394)
...-....+++|++++.++++ ...++.| ||..+++...+... ...++...+.++
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-----------------~~~~~~~~~~~i 76 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP-----------------EVNGYGGIPAGC 76 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC-----------------EETTEECCEEEE
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEec-----------------ccCCCCCCCceE
Confidence 344456789999999988887 4556654 77667665432110 001233567788
Q ss_pred Eec-C-CeEEEEeCCCeEEEEeCCCCceeEE-EcC----CCCCcEEEEEc--CCEEEEEeCC---------------CcE
Q 016134 242 AVG-R-SRLCSGSMDNTIRVWELDTLEPVMT-LND----HTDAPMSLLCW--DQFLLSCSLD---------------HTI 297 (394)
Q Consensus 242 ~~~-~-~~l~sgs~Dg~V~iwd~~~~~~~~~-~~~----h~~~v~~l~~~--~~~l~s~s~D---------------g~i 297 (394)
+++ . ..|+.+..+..|.+||.+ ++.... ... ....+.+++++ +.++++...+ +.|
T Consensus 77 ~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 77 QCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp EECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred EEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 886 3 466666656689999998 665432 221 12357888887 5666665544 456
Q ss_pred EEEEeCCCceeeEeecccCCcceEEEEeeEC----CCCCcEEEEEeCCCeEEEEECC-CCce-----eEEEecC--CcEE
Q 016134 298 KVWFATGRGNLEAAYTHKEDNGVLALGGLND----PDGKPVLICACNDNTVHLYELP-SFME-----RGRIFSK--HEVR 365 (394)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~g~~~l~sgs~dg~I~iwd~~-~~~~-----~~~~~~~--~~v~ 365 (394)
..||.. ++ ...+......... ..++ ++++.++++...++.|.+||+. ++.. ...+... ..+.
T Consensus 156 ~~~~~~-g~-~~~~~~~~~~~~~----i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 229 (314)
T 1pjx_A 156 YCFTTD-GQ-MIQVDTAFQFPNG----IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGAD 229 (314)
T ss_dssp EEECTT-SC-EEEEEEEESSEEE----EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEE
T ss_pred EEECCC-CC-EEEeccCCCCcce----EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCC
Confidence 666654 33 2222222111122 2346 8886456666678999999986 4432 1111111 5688
Q ss_pred EEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 366 VIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 366 ~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
.++++++| ++++...++.|.+||..
T Consensus 230 ~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 230 GMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred ceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 99999999 66666678899999976
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.71 E-value=2.7e-06 Score=86.75 Aligned_cols=280 Identities=7% Similarity=-0.071 Sum_probs=156.7
Q ss_pred cccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEcCC
Q 016134 83 NNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGE 162 (394)
Q Consensus 83 ~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~ 162 (394)
....|..++.|..+..+|.++++..=..+.. .....+ ..+....+..-...++.+...+...++.|+.+|..+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-----~~~~~~--~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~t 199 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTF-----EGQKGS--LTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAET 199 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETT-----TTCCSS--CBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCC-----cCcCcC--cccccCcEEECCEEEEEecccccCCCCEEEEEECCC
Confidence 3455666777888999999988753100000 000000 011111101111112222111112367999999998
Q ss_pred CceEEEEecccCC--------------------------------CeEEEEecCCCCEEEEEeCCCc-------------
Q 016134 163 GLTMLAKLEGHEK--------------------------------AVSGIALPLRSDKLFSGSRDGT------------- 197 (394)
Q Consensus 163 ~~~~~~~l~~h~~--------------------------------~V~~l~~s~~~~~l~sgs~Dg~------------- 197 (394)
+ +.+-.+..... ....+++++++.+|+.+..++.
T Consensus 200 G-~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd 278 (677)
T 1kb0_A 200 G-ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGD 278 (677)
T ss_dssp C-CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred C-cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCC
Confidence 8 55544433211 1135788899999998887652
Q ss_pred --------eeecCCCcEEE-ecC--CCCcEEEEEEcCCEEEEEecCCCCCC-EEEEEecC---CeEEEEeCCCeEEEEeC
Q 016134 198 --------AWNIESSAEFS-LDG--PVGEVYSMVVANEMLFAGAQDGHTRP-VTCLAVGR---SRLCSGSMDNTIRVWEL 262 (394)
Q Consensus 198 --------vWd~~~~~~~~-~~~--~~~~v~~l~~~~~~l~~~~~~~h~~~-V~~l~~~~---~~l~sgs~Dg~V~iwd~ 262 (394)
.+|.++++.+- +.. +...- .+....+ +..+..++ ..++.++.+|.|.++|.
T Consensus 279 ~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd--------------~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~ 344 (677)
T 1kb0_A 279 NLYLASIVALDPDTGKYKWHYQETPGDNWD--------------YTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDR 344 (677)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSC--------------CCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred CeeeEEEEEEECCCCCEEEEEecCCCcccc--------------cccCCCcEEEecccCCcEeeEEEEECCCCEEEEEEC
Confidence 25666666541 111 10000 0001112 22223345 57999999999999999
Q ss_pred CCCceeEEEcCCCCC-----------c------------------------EEEEEc--CCEEEEEeC------------
Q 016134 263 DTLEPVMTLNDHTDA-----------P------------------------MSLLCW--DQFLLSCSL------------ 293 (394)
Q Consensus 263 ~~~~~~~~~~~h~~~-----------v------------------------~~l~~~--~~~l~s~s~------------ 293 (394)
++++.+..+...... + ..++++ ..++++...
T Consensus 345 ~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 424 (677)
T 1kb0_A 345 TNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKW 424 (677)
T ss_dssp TTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTC
T ss_pred CCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccc
Confidence 999988776522110 0 134555 456655432
Q ss_pred -------------------------------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC
Q 016134 294 -------------------------------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN 342 (394)
Q Consensus 294 -------------------------------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg 342 (394)
.+.|..||+.+++.+-....... .....+ ...+. +++.++.|+
T Consensus 425 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~-~~~g~~----~~~g~-~v~~g~~dg 498 (677)
T 1kb0_A 425 EFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP-WNGGTL----TTAGN-VVFQGTADG 498 (677)
T ss_dssp CTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS-CCCCEE----EETTT-EEEEECTTS
T ss_pred ccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC-CcCcce----EeCCC-EEEEECCCC
Confidence 27899999998887665543221 111122 34566 677789999
Q ss_pred eEEEEECCCCceeEEEecCCc--EEEEEECCCC--EEEEEeC----------------CCeEEEEeCC
Q 016134 343 TVHLYELPSFMERGRIFSKHE--VRVIEIGPDK--LFFTGDG----------------AGMLGVWKLL 390 (394)
Q Consensus 343 ~I~iwd~~~~~~~~~~~~~~~--v~~l~~sp~~--~l~tgs~----------------Dg~I~vWd~~ 390 (394)
.+++||.++++.+..+..... ..-+.+..+| +++..+. .+.+.+|.+.
T Consensus 499 ~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 499 RLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred cEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 999999999999988876332 2234455777 5555333 4678888775
No 218
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.71 E-value=6.8e-06 Score=77.17 Aligned_cols=229 Identities=8% Similarity=0.046 Sum_probs=135.5
Q ss_pred CCeEEEEEcCCCceEEEEeccc---------CCCeEEEEecCCCCEEEEEeCCCce--eecCCCcEE-EecCCCCcEEEE
Q 016134 152 CRFLHSWFCGEGLTMLAKLEGH---------EKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEF-SLDGPVGEVYSM 219 (394)
Q Consensus 152 ~~~i~iWd~~~~~~~~~~l~~h---------~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~-~~~~~~~~v~~l 219 (394)
++.|..+|..++ +.+..+... ...+.+. ...++..|+.++.++.| +|.++++.+ ............
T Consensus 62 ~g~v~a~d~~tG-~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p 139 (376)
T 3q7m_A 62 AGLVKALNADDG-KEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRP 139 (376)
T ss_dssp TSEEEEEETTTC-CEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CCeEEEEEccCC-ceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCC
Confidence 458999999887 444443332 1223222 12245678888888874 888888766 222111111111
Q ss_pred EEcCCEEEEEecCC-------CCCC----------E------EEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCC
Q 016134 220 VVANEMLFAGAQDG-------HTRP----------V------TCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD 276 (394)
Q Consensus 220 ~~~~~~l~~~~~~~-------h~~~----------V------~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~ 276 (394)
....+.+++++.++ .++. + ......++.++.+..++.|..+|.++++.+........
T Consensus 140 ~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 140 VVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-
T ss_pred EEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccC
Confidence 22334444444331 1111 1 11122356788888999999999999998877653211
Q ss_pred -----------CcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEE
Q 016134 277 -----------APMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVH 345 (394)
Q Consensus 277 -----------~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~ 345 (394)
........+..++.++.++.|..+|.++++.+-..... ...... . ++. .|..++.++.|.
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~--~--~~~-~l~~~~~~g~l~ 290 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG----SVNDFI--V--DGN-RIYLVDQNDRVM 290 (376)
T ss_dssp ----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC----CEEEEE--E--ETT-EEEEEETTCCEE
T ss_pred CCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC----CCCCce--E--ECC-EEEEEcCCCeEE
Confidence 00122234778888889999999999888766443321 111111 1 234 566677899999
Q ss_pred EEECCCCceeEEEec--CCcEEEEEECCCCEEEEEeCCCeEEEEeCCCC
Q 016134 346 LYELPSFMERGRIFS--KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 346 iwd~~~~~~~~~~~~--~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
.+|..+++.+..... ...+...... ++.|+.++.+|.|.++|..+.
T Consensus 291 ~~d~~tG~~~w~~~~~~~~~~~~~~~~-~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 291 ALTIDGGVTLWTQSDLLHRLLTSPVLY-NGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp EEETTTCCEEEEECTTTTSCCCCCEEE-TTEEEEECTTSEEEEEETTTC
T ss_pred EEECCCCcEEEeecccCCCcccCCEEE-CCEEEEEeCCCeEEEEECCCC
Confidence 999999988776652 1122222332 458888999999999998764
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.70 E-value=5.9e-07 Score=84.42 Aligned_cols=228 Identities=12% Similarity=0.020 Sum_probs=135.5
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----------CCc--eeecCCCcEEE-ecCC-------C
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----------DGT--AWNIESSAEFS-LDGP-------V 213 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----------Dg~--vWd~~~~~~~~-~~~~-------~ 213 (394)
.|.+.|..+. +.+.++..-..+ .++++||+++|+.+.. ++. +||+.+++.+. +... .
T Consensus 47 ~vsvID~~t~-~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGCG-VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTTT-EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCCC-eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 7889999887 777777655566 7999999999998863 333 69999998773 2211 0
Q ss_pred CcEEEEEEcCC--EEEEEecC-CCCCC--------EEEEEe--------c-CCeEEEEeCCCeEEEEeCCC----CceeE
Q 016134 214 GEVYSMVVANE--MLFAGAQD-GHTRP--------VTCLAV--------G-RSRLCSGSMDNTIRVWELDT----LEPVM 269 (394)
Q Consensus 214 ~~v~~l~~~~~--~l~~~~~~-~h~~~--------V~~l~~--------~-~~~l~sgs~Dg~V~iwd~~~----~~~~~ 269 (394)
.....++++|+ .++++... ...-. +..+.. . ...+++.+.|+.+.+.|+.+ ...+.
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 12345667776 45544322 11100 122211 1 23455566677776666654 22222
Q ss_pred E-----EcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCc--eeeEeecc----------cCCcceEEEEeeECCCC
Q 016134 270 T-----LNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRG--NLEAAYTH----------KEDNGVLALGGLNDPDG 331 (394)
Q Consensus 270 ~-----~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~--~~~~~~~~----------~~~~~~~~~~~~~s~~g 331 (394)
. +.....+. ... +..++..+. +.|.+.|+.... .+..+... ......+ .++|++
T Consensus 204 ~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v----~~s~dg 275 (368)
T 1mda_H 204 AQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMV----AKLKNT 275 (368)
T ss_dssp CCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCE----EEETTT
T ss_pred EEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceee----EEcCCC
Confidence 1 00001121 122 445555555 778888875432 11111100 0001112 358999
Q ss_pred CcEEEEEe-C-------CCeEEEEECCCCceeEEEecCCcEEEEEECCCC--EEEEEe-CCCeEEEEeCCCC
Q 016134 332 KPVLICAC-N-------DNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--LFFTGD-GAGMLGVWKLLAK 392 (394)
Q Consensus 332 ~~~l~sgs-~-------dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tgs-~Dg~I~vWd~~~~ 392 (394)
+.++++.. . ++.+.++|+.+.+.+..+........|+|+||+ ++++.. .++.|.++|+.+.
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 85555443 2 235669999999988888776689999999998 566666 5999999998764
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.69 E-value=1.5e-05 Score=73.55 Aligned_cols=202 Identities=12% Similarity=-0.031 Sum_probs=116.1
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEec
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQ 231 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~ 231 (394)
+.|..||..++ +. ..+. ....|.+++|+++++++++. .++. +||.++++...+.....
T Consensus 71 ~~i~~~d~~~~-~~-~~~~-~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~~~g~~~~~~~~~~----------------- 129 (326)
T 2ghs_A 71 RELHELHLASG-RK-TVHA-LPFMGSALAKISDSKQLIAS-DDGLFLRDTATGVLTLHAELES----------------- 129 (326)
T ss_dssp TEEEEEETTTT-EE-EEEE-CSSCEEEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSST-----------------
T ss_pred CEEEEEECCCC-cE-EEEE-CCCcceEEEEeCCCeEEEEE-CCCEEEEECCCCcEEEEeeCCC-----------------
Confidence 48999999876 32 2222 34689999999999887765 4443 48877776543321110
Q ss_pred CCCCCCEEEEEec--CCeEEEEeC------CCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEE-eCCCcEEEE
Q 016134 232 DGHTRPVTCLAVG--RSRLCSGSM------DNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSC-SLDHTIKVW 300 (394)
Q Consensus 232 ~~h~~~V~~l~~~--~~~l~sgs~------Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-s~Dg~i~vw 300 (394)
......+.++.++ ++++++... .+.|..+| +++.. .+..+......++|+ ++.|+.+ ..++.|.+|
T Consensus 130 ~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~ 206 (326)
T 2ghs_A 130 DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 206 (326)
T ss_dssp TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEE
Confidence 0112345566665 344333321 24555555 44433 232233456788887 5555444 457899999
Q ss_pred EeC--CC-cee--eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEEC-CCC
Q 016134 301 FAT--GR-GNL--EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIG-PDK 373 (394)
Q Consensus 301 d~~--~~-~~~--~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~s-p~~ 373 (394)
|+. ++ ... ..+....... ...-...++++|. ++++...++.|.+||. +++.+..+.. ...+++++|+ +++
T Consensus 207 d~~~~~Gl~~~~~~~~~~~~~~~-~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 207 PLDARTGLPTGKAEVFIDSTGIK-GGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp EBCTTTCCBSSCCEEEEECTTSS-SEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred EcccccCCcccCceEEEECCCCC-CCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 986 44 211 1121111111 1112334688998 6666666789999998 5666666554 4469999998 886
Q ss_pred -EE-EEEeCC
Q 016134 374 -LF-FTGDGA 381 (394)
Q Consensus 374 -~l-~tgs~D 381 (394)
.| ++...+
T Consensus 284 ~~L~vt~~~~ 293 (326)
T 2ghs_A 284 SRLLVTSARE 293 (326)
T ss_dssp CEEEEEEBCT
T ss_pred CEEEEEecCC
Confidence 44 444444
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.69 E-value=3.3e-05 Score=72.71 Aligned_cols=217 Identities=6% Similarity=-0.105 Sum_probs=127.8
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----------CCc--eeecCCCcEEEecCCCCcEEEEEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----------DGT--AWNIESSAEFSLDGPVGEVYSMVV 221 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----------Dg~--vWd~~~~~~~~~~~~~~~v~~l~~ 221 (394)
.|.++|..++ +.+.++..-..+ .++++||+++|+.+.. ++. ++|..+.+.+......+.
T Consensus 48 ~v~v~D~~t~-~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~------ 118 (373)
T 2mad_H 48 QQWVLDAGSG-SILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDA------ 118 (373)
T ss_pred EEEEEECCCC-eEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCc------
Confidence 7899999887 667777654444 9999999999998863 333 688887765521110000
Q ss_pred cCCEEEEEecCCCCCCEEEEEec--CCeEEEEeC--CCeEEEEeCCCCceeEE-EcCCCCCcEEEEEc-CCEEEEEeCCC
Q 016134 222 ANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGSM--DNTIRVWELDTLEPVMT-LNDHTDAPMSLLCW-DQFLLSCSLDH 295 (394)
Q Consensus 222 ~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs~--Dg~V~iwd~~~~~~~~~-~~~h~~~v~~l~~~-~~~l~s~s~Dg 295 (394)
... .+...-..+.++ +++|+++.. ++.|.++| .+++.+.+ +... ..+ .+... ...+++.+.|+
T Consensus 119 --~~~------~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~-~~~-~~~~~~~~~~~~~~~dg 187 (373)
T 2mad_H 119 --PRF------DVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP-TCY-HIHPGAPSTFYLLCAQG 187 (373)
T ss_pred --ccc------ccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC-ceE-EEEeCCCceEEEEcCCC
Confidence 000 000112345565 677877764 57899999 99998887 6532 222 22222 45677788899
Q ss_pred cEEEEEeCCCceeeEeeccc--CCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce--eEEEec-----------
Q 016134 296 TIKVWFATGRGNLEAAYTHK--EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME--RGRIFS----------- 360 (394)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~--~~~~~~----------- 360 (394)
++.++|. +++......... .....+.....+.+++..+++.. .++.+.+.|+..... +..+..
T Consensus 188 ~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~ 265 (373)
T 2mad_H 188 GLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWR 265 (373)
T ss_pred CEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCccccccee
Confidence 9999999 766553322100 00111111122345554344443 678999999976532 222211
Q ss_pred CCcEEEEEECCCC-EEEEEeC----------CCeEEEEeCCCC
Q 016134 361 KHEVRVIEIGPDK-LFFTGDG----------AGMLGVWKLLAK 392 (394)
Q Consensus 361 ~~~v~~l~~sp~~-~l~tgs~----------Dg~I~vWd~~~~ 392 (394)
......++++|++ .|+.... ++.|.++|+.+.
T Consensus 266 p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 266 PGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred cCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 2234557899998 5555432 357999998764
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.68 E-value=8.2e-09 Score=97.51 Aligned_cols=193 Identities=16% Similarity=0.026 Sum_probs=102.9
Q ss_pred CCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcEEEecC-CCCcEEEEEEcCCEE
Q 016134 150 DECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDG-PVGEVYSMVVANEML 226 (394)
Q Consensus 150 ~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~~~~~-~~~~v~~l~~~~~~l 226 (394)
+.++.|+.||..++ +.+..+.. +.+.+..+..++..+++++.|+.| ||.++++.+.... +....
T Consensus 16 s~dg~v~a~d~~tG-~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~---------- 82 (369)
T 2hz6_A 16 TLDGSLHAVSKRTG-SIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL---------- 82 (369)
T ss_dssp ETTSEEEEEETTTC-CEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH----------
T ss_pred cCCCEEEEEECCCC-CEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc----------
Confidence 34459999999988 66666665 566666666778888888899984 8887777542211 10000
Q ss_pred EEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCc
Q 016134 227 FAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRG 306 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~ 306 (394)
....++. ..++.+++++.|+.|+.||.++++.+..+..+.. + .....+..+++++.|+.|+.||.++++
T Consensus 83 ------~~~sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~-~-~~~p~~~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 83 ------VQASPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA-D-SLSPSTSLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp ------HTTCSCC--------CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSS
T ss_pred ------cccCceE---ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc-c-cccccCCEEEEEecCCEEEEEECCCCC
Confidence 0011110 1245678888999999999999998887765532 1 111247788889999999999999887
Q ss_pred eeeEeecccCCcceEEEEeeECCCC---CcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEE-EEECCCC
Q 016134 307 NLEAAYTHKEDNGVLALGGLNDPDG---KPVLICACNDNTVHLYELPSFMERGRIFSKHEVRV-IEIGPDK 373 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~g---~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~-l~~sp~~ 373 (394)
.+-.+..... ... .+..+. . .+++++.|+.|+.||..+++.+-......++.. ..+++++
T Consensus 152 ~~W~~~~~~~--~~~----~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 152 LRWNATYFDY--AAS----LPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREG 215 (369)
T ss_dssp CCCEEEEEEE--CCB----CCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred EEEeEecccc--cCc----cccCCccccc-eEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCc
Confidence 6554432211 111 123321 3 456688899999999999988877765555543 4555666
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.67 E-value=2.8e-06 Score=79.92 Aligned_cols=259 Identities=12% Similarity=-0.004 Sum_probs=153.8
Q ss_pred CCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCee------cCCCCCeEEEEEcCCCceE
Q 016134 93 DRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCV------RGDECRFLHSWFCGEGLTM 166 (394)
Q Consensus 93 d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~------~g~~~~~i~iWd~~~~~~~ 166 (394)
+.++.+-|..+....+.. ..|... . +. ++|++.++..+.. .|+.+..|.+||..+. +.
T Consensus 58 ~~~V~ViD~~t~~v~~~I-----------~vG~~P--~-va-~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~-~v 121 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMI-----------DGGFLP--N-PV-VADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL-LP 121 (386)
T ss_dssp SEEEEEEETTTTEEEEEE-----------EECSSC--E-EE-ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CE
T ss_pred CCEEEEEECCCCeEEEEE-----------ECCCCC--c-EE-ECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-eE
Confidence 567888888877754311 112221 2 55 9999998755442 2233458999999887 66
Q ss_pred EEEeccc-------CCCeEEEEecCCCCEEEEEeC--CCc--eeecCCCcEEEecCCCCc--EE------EEEEcCC--E
Q 016134 167 LAKLEGH-------EKAVSGIALPLRSDKLFSGSR--DGT--AWNIESSAEFSLDGPVGE--VY------SMVVANE--M 225 (394)
Q Consensus 167 ~~~l~~h-------~~~V~~l~~s~~~~~l~sgs~--Dg~--vWd~~~~~~~~~~~~~~~--v~------~l~~~~~--~ 225 (394)
+.++.-. ...-..++|+|||++|+.+.. ++. ++|+.+++.+......+. ++ -+..+++ .
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~ 201 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSL 201 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCE
T ss_pred EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCE
Confidence 6665321 124567999999999998875 344 699999887632211110 11 1233444 3
Q ss_pred EEEEecC-CCC------------CCEE-EEEec--CCeEEEEeCCCeEEEEeCCCCc--eeEEEc---------C-CCCC
Q 016134 226 LFAGAQD-GHT------------RPVT-CLAVG--RSRLCSGSMDNTIRVWELDTLE--PVMTLN---------D-HTDA 277 (394)
Q Consensus 226 l~~~~~~-~h~------------~~V~-~l~~~--~~~l~sgs~Dg~V~iwd~~~~~--~~~~~~---------~-h~~~ 277 (394)
+++.... ++. ..+. ...|. ...++..+.+|.|.+.|+.+.. .+..+. + ....
T Consensus 202 ~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g 281 (386)
T 3sjl_D 202 AKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG 281 (386)
T ss_dssp EEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECS
T ss_pred EEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCC
Confidence 3332222 111 0110 01332 2344446678999999997654 222222 0 0112
Q ss_pred cEEEEEc--CCEEEEEeC----------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEE-EeCCCeE
Q 016134 278 PMSLLCW--DQFLLSCSL----------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLIC-ACNDNTV 344 (394)
Q Consensus 278 v~~l~~~--~~~l~s~s~----------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~s-gs~dg~I 344 (394)
...+.++ ++.|+.... .++|.+.|+.+.+.+..+..... .. .+.+++|++.+|++ ...++.|
T Consensus 282 ~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~-~~----~lavs~D~~~~ly~tn~~~~~V 356 (386)
T 3sjl_D 282 WQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHE-ID----SINVSQDEKPLLYALSTGDKTL 356 (386)
T ss_dssp SSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-EC----EEEECSSSSCEEEEEETTTTEE
T ss_pred cceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCC-cc----eEEECCCCCeEEEEEcCCCCeE
Confidence 2234444 566665532 25799999999988887765431 12 23459999745555 4558999
Q ss_pred EEEECCCCceeEEEecCCcEEEEEECCC
Q 016134 345 HLYELPSFMERGRIFSKHEVRVIEIGPD 372 (394)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~v~~l~~sp~ 372 (394)
.++|..+++.+.++......+.|.+++|
T Consensus 357 sViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 357 YIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEECCCCcEEEEecCCCCCceeEECCc
Confidence 9999999999999987665566666655
No 224
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.64 E-value=1e-05 Score=71.49 Aligned_cols=187 Identities=14% Similarity=0.108 Sum_probs=125.9
Q ss_pred eEEEEecccCCC--eEEEEecCCCCEEEEEeCCCc----eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCE
Q 016134 165 TMLAKLEGHEKA--VSGIALPLRSDKLFSGSRDGT----AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPV 238 (394)
Q Consensus 165 ~~~~~l~~h~~~--V~~l~~s~~~~~l~sgs~Dg~----vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V 238 (394)
+.++++ .|... ...|.|+ ++.++.+.+.+|. +.|+++++.+....... ...-
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~--------------------~~Fg 89 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK--------------------RYFG 89 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT--------------------TCCE
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC--------------------ccce
Confidence 556666 45443 4789998 6777778887773 58999998763221111 1111
Q ss_pred EEEEecCCeEEEEe-CCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCC
Q 016134 239 TCLAVGRSRLCSGS-MDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317 (394)
Q Consensus 239 ~~l~~~~~~l~sgs-~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~ 317 (394)
..+++.++.|+... .++.+.+||.++.+.+.++... ..-..+++.++.|+....+++|.++|..+.+.+..+......
T Consensus 90 eGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~-~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 90 EGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD-GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECS-SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC-CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 23445555554444 5889999999999999999753 333577777777777666788999999988877776653321
Q ss_pred --cc-eEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC-------------CcEEEEEECCCC--EEEEE
Q 016134 318 --NG-VLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK-------------HEVRVIEIGPDK--LFFTG 378 (394)
Q Consensus 318 --~~-~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-------------~~v~~l~~sp~~--~l~tg 378 (394)
.. ...+. +. +|+ +.+..-.++.|.+.|..+++.+..+... ...+.|+++|++ +++||
T Consensus 169 ~~~~~lNELe--~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 169 EELPELNELE--WV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EECCCEEEEE--EE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccccccceeE--EE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 11 11222 22 676 6666667889999999999988887641 246999999987 55554
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.64 E-value=1.9e-06 Score=80.13 Aligned_cols=229 Identities=11% Similarity=-0.009 Sum_probs=129.4
Q ss_pred ceeeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEe-------cccCCCeEEEEecCCCCEEEEEeC-----C
Q 016134 128 TSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKL-------EGHEKAVSGIALPLRSDKLFSGSR-----D 195 (394)
Q Consensus 128 ~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l-------~~h~~~V~~l~~s~~~~~l~sgs~-----D 195 (394)
....++ +++.+..+++.....+ +.++||.+.++ ++ ..+ .+|...+.+|+++++++++++-.. +
T Consensus 18 ~p~~va-~~~~g~~~v~~~~~~~--~~~~l~~~~~g-~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 18 APGNIT-LTPDGRLFLSLHQFYQ--PEMQVAELTQD-GL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp CEEEEE-ECTTSCEEEEECGGGC--CSCSEEEEETT-EE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CcceEE-ECCCCCEEEEeCCCCC--CceEEEEECCC-Ce-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 445555 6666666554322111 11455554433 32 222 245678999999999876665433 3
Q ss_pred Cc--eeecCCCcEEE-ecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeE-EEEe---CCCeEEEEeCCCCc
Q 016134 196 GT--AWNIESSAEFS-LDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRL-CSGS---MDNTIRVWELDTLE 266 (394)
Q Consensus 196 g~--vWd~~~~~~~~-~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l-~sgs---~Dg~V~iwd~~~~~ 266 (394)
.. +||+.+++.+. +..... ...+...+..++++ +..+ ++-. .++.|.+||+.+++
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~----------------~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPP----------------ITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTT----------------TSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred CeEEEEECCCCeEEEEEECChh----------------hcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 44 48888887542 211100 00223345666776 3344 4444 57899999998888
Q ss_pred eeEEEcCCC-----------------------------CCcEEEEEc--CCEEEEEeCCC-cEEEEEeC---CCce----
Q 016134 267 PVMTLNDHT-----------------------------DAPMSLLCW--DQFLLSCSLDH-TIKVWFAT---GRGN---- 307 (394)
Q Consensus 267 ~~~~~~~h~-----------------------------~~v~~l~~~--~~~l~s~s~Dg-~i~vwd~~---~~~~---- 307 (394)
..+.+..|. ..+..|+++ ++.|+.+..++ .|..++.. ....
T Consensus 157 ~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 157 AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH
T ss_pred EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh
Confidence 766664431 124667777 66777776665 44334321 1100
Q ss_pred -ee--EeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec--CCcEEEEEECCCC-EEEEEeCC
Q 016134 308 -LE--AAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK-LFFTGDGA 381 (394)
Q Consensus 308 -~~--~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~-~l~tgs~D 381 (394)
.. ...........++ ++++|. ++++...++.|.+||..+++....... ...+.+++|.+++ ++++.+..
T Consensus 237 ~~~~~~~~g~~g~pdgia----~d~~G~-l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 237 LGSKIERYSEKPICDGIS----IDKDHN-IYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HHTTCEEEEECCSCSCEE----ECTTCC-EEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred hhcceEecccCCCCceEE----ECCCCC-EEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 00 0111111122233 488987 888888899999999855654333322 3458999999999 66666544
Q ss_pred C
Q 016134 382 G 382 (394)
Q Consensus 382 g 382 (394)
+
T Consensus 312 ~ 312 (343)
T 2qe8_A 312 H 312 (343)
T ss_dssp G
T ss_pred c
Confidence 3
No 226
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.63 E-value=6e-05 Score=68.31 Aligned_cols=193 Identities=9% Similarity=0.030 Sum_probs=115.2
Q ss_pred ecccCCCeEEEEecCCCC-EEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--
Q 016134 170 LEGHEKAVSGIALPLRSD-KLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-- 244 (394)
Q Consensus 170 l~~h~~~V~~l~~s~~~~-~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-- 244 (394)
+..+..-..+..|++++. ++++...++.| ||.++++.... .....+.+++++
T Consensus 8 ~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-----------------------~~~~~~~~i~~~~d 64 (297)
T 3g4e_A 8 LPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-----------------------TMDAPVSSVALRQS 64 (297)
T ss_dssp ECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-----------------------ECSSCEEEEEEBTT
T ss_pred eccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-----------------------eCCCceEEEEECCC
Confidence 344455667889998655 45555555664 77776654322 123456677776
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEcCC----CCCcEEEEEc--CCEEEEEeC---------CCcEEEEEeCCCceee
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLNDH----TDAPMSLLCW--DQFLLSCSL---------DHTIKVWFATGRGNLE 309 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~s~---------Dg~i~vwd~~~~~~~~ 309 (394)
++ |+.+. +..|.+||.++++........ ...+..+.++ +.++++... ...-.||.+.......
T Consensus 65 G~-l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~ 142 (297)
T 3g4e_A 65 GG-YVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK 142 (297)
T ss_dssp SS-EEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE
T ss_pred CC-EEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE
Confidence 44 44444 568999999887654322211 2346778887 665554422 2334666665433333
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEEC--CCCcee--EEEe---c-CCcEEEEEECCCC-EEEEEeC
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYEL--PSFMER--GRIF---S-KHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~--~~~~~~--~~~~---~-~~~v~~l~~sp~~-~l~tgs~ 380 (394)
.+...... .. ..+++|+++.++++.+.++.|.+|++ .++... ..+. . ...+..+++.++| +.++...
T Consensus 143 ~~~~~~~~--pn--gi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~ 218 (297)
T 3g4e_A 143 KYFDQVDI--SN--GLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN 218 (297)
T ss_dssp EEEEEESB--EE--EEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET
T ss_pred EEeecccc--cc--ceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC
Confidence 32222111 11 23469999866677777899999997 455432 1121 1 3468899999999 6666667
Q ss_pred CCeEEEEeCCC
Q 016134 381 AGMLGVWKLLA 391 (394)
Q Consensus 381 Dg~I~vWd~~~ 391 (394)
.+.|.+||..+
T Consensus 219 ~~~v~~~d~~t 229 (297)
T 3g4e_A 219 GGRVIRLDPVT 229 (297)
T ss_dssp TTEEEEECTTT
T ss_pred CCEEEEEcCCC
Confidence 78899998764
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.60 E-value=1e-05 Score=75.14 Aligned_cols=206 Identities=11% Similarity=-0.011 Sum_probs=125.3
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeC--CC--ceeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSR--DG--TAWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~--Dg--~vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
+.+..+. ..+..|+++++|+.+++... ++ .||.+.+++...+.... .....|...+..
T Consensus 10 ~~v~~~~---~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~---------------~~~~~~~~~p~g 71 (343)
T 2qe8_A 10 EVVAELS---LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQS---------------GNAIITFDTVLG 71 (343)
T ss_dssp EEEEEES---SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCC---------------SSCCCCCSCEEE
T ss_pred EEEEEcC---CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcc---------------cCcccceeEeeE
Confidence 4455544 68999999999999998742 34 57877644433221110 011246678889
Q ss_pred EEec-CCeEEEEe-C-----CCeEEEEeCCCCceeEEEcCC------CCCcEEEEEc--CCEE-EEEe---CCCcEEEEE
Q 016134 241 LAVG-RSRLCSGS-M-----DNTIRVWELDTLEPVMTLNDH------TDAPMSLLCW--DQFL-LSCS---LDHTIKVWF 301 (394)
Q Consensus 241 l~~~-~~~l~sgs-~-----Dg~V~iwd~~~~~~~~~~~~h------~~~v~~l~~~--~~~l-~s~s---~Dg~i~vwd 301 (394)
++++ ...|+... . +..|.+||+++++.+..+... ...+..++++ +..+ ++-. .++.|.+||
T Consensus 72 v~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 72 IKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp EEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred EEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 9997 34444443 2 579999999999877766532 2346788887 3454 4444 578999999
Q ss_pred eCCCceeeEeecccCC-------------------------cceEEEEeeECCCCCcEEEEEeCCC-eEEEEECC---CC
Q 016134 302 ATGRGNLEAAYTHKED-------------------------NGVLALGGLNDPDGKPVLICACNDN-TVHLYELP---SF 352 (394)
Q Consensus 302 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~s~~g~~~l~sgs~dg-~I~iwd~~---~~ 352 (394)
+.+++....+..+... .......++++|+++ .|..+..++ .|..++.. .+
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE-WLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSC-EEEEEESSCSEEEEEEHHHHTCT
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCC-EEEEEeCCCCeEEEEEHHHhcCC
Confidence 9876654443221000 000122345799998 555555444 55555432 11
Q ss_pred c--------eeEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeC
Q 016134 353 M--------ERGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKL 389 (394)
Q Consensus 353 ~--------~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~ 389 (394)
. .+...........++++++| ++++...++.|.+||.
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 0 01111122345678999999 7778888899999997
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.60 E-value=4.2e-06 Score=85.43 Aligned_cols=152 Identities=13% Similarity=0.027 Sum_probs=99.4
Q ss_pred EEec--CCeEEEEeCCC-------------------eEEEEeCCCCceeEEEcC--CC-------CCcE--EEEEcCC--
Q 016134 241 LAVG--RSRLCSGSMDN-------------------TIRVWELDTLEPVMTLND--HT-------DAPM--SLLCWDQ-- 286 (394)
Q Consensus 241 l~~~--~~~l~sgs~Dg-------------------~V~iwd~~~~~~~~~~~~--h~-------~~v~--~l~~~~~-- 286 (394)
++++ .++++.++.++ .|..+|.++++.+..++. |. ..+. .+.+.++
T Consensus 240 ~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~ 319 (689)
T 1yiq_A 240 FAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPR 319 (689)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEE
Confidence 4454 46777777665 499999999999887764 22 1111 2223343
Q ss_pred -EEEEEeCCCcEEEEEeCCCceeeEeeccc-------------------------CCcceEEE----------EeeECCC
Q 016134 287 -FLLSCSLDHTIKVWFATGRGNLEAAYTHK-------------------------EDNGVLAL----------GGLNDPD 330 (394)
Q Consensus 287 -~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~-------------------------~~~~~~~~----------~~~~s~~ 330 (394)
.++.++.+|.++++|.++++.+....... .....+.+ ..+++|+
T Consensus 320 ~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~ 399 (689)
T 1yiq_A 320 KVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPD 399 (689)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETT
T ss_pred EEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCC
Confidence 78889999999999999988764322111 00000000 0245777
Q ss_pred CCcEEEEEeC---------------------------------------------CCeEEEEECCCCceeEEEecCCcEE
Q 016134 331 GKPVLICACN---------------------------------------------DNTVHLYELPSFMERGRIFSKHEVR 365 (394)
Q Consensus 331 g~~~l~sgs~---------------------------------------------dg~I~iwd~~~~~~~~~~~~~~~v~ 365 (394)
.. +|++... ++.|+.||+.+++.+-++.....+.
T Consensus 400 ~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~ 478 (689)
T 1yiq_A 400 TG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN 478 (689)
T ss_dssp TT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC
T ss_pred CC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc
Confidence 76 5554421 3789999999999888877654444
Q ss_pred EEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 366 VIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 366 ~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
...+...+ +++.++.|+.|+.||..+..
T Consensus 479 ~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 479 GGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CccceECCCEEEEECCCCcEEEEECCCCc
Confidence 33444454 99999999999999988754
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.55 E-value=8.3e-06 Score=74.66 Aligned_cols=207 Identities=11% Similarity=-0.009 Sum_probs=129.5
Q ss_pred CCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEE
Q 016134 151 ECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFA 228 (394)
Q Consensus 151 ~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~ 228 (394)
.++.|..+|.. + +....+..+...+.++...+++. |+.++.++.| +|.+ ++......
T Consensus 115 ~~~~l~~~d~~-g-~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~----------------- 173 (330)
T 3hxj_A 115 MDGHLYAINTD-G-TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK----------------- 173 (330)
T ss_dssp TTSEEEEECTT-S-CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE-----------------
T ss_pred cCCEEEEEcCC-C-CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe-----------------
Confidence 34578888887 4 44555555566677777777776 5556666664 6665 44432110
Q ss_pred EecCCCCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCc
Q 016134 229 GAQDGHTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRG 306 (394)
Q Consensus 229 ~~~~~h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~ 306 (394)
.....+.++..+ ...+..++ +.|..+| .+++.+..+......+.++... ...|..++.++.|..+|. +++
T Consensus 174 ----~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~ 245 (330)
T 3hxj_A 174 ----TNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGT 245 (330)
T ss_dssp ----CSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSC
T ss_pred ----cCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCC
Confidence 111233344453 44565666 7899999 7777777776665667777777 347777888888888874 444
Q ss_pred eeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCCeEE
Q 016134 307 NLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAGMLG 385 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg~I~ 385 (394)
.+..+........... ..+++. |..++.++.|..+|. +++.+..+.. ...+.++...+++.|..++.+|.++
T Consensus 246 ~~~~~~~~~~~~~~~~----~~~~g~--l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~ 318 (330)
T 3hxj_A 246 EKWRFKTGKRIESSPV----IGNTDT--IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFY 318 (330)
T ss_dssp EEEEEECSSCCCSCCE----ECTTSC--EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEE
T ss_pred EeEEeeCCCCccccce----EcCCCe--EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEE
Confidence 4443332222122222 355665 555778889999996 6666655544 4457777887888888899999999
Q ss_pred EEeCCCCC
Q 016134 386 VWKLLAKP 393 (394)
Q Consensus 386 vWd~~~~~ 393 (394)
+...+.++
T Consensus 319 ~~~~~~~~ 326 (330)
T 3hxj_A 319 ALFNLEHH 326 (330)
T ss_dssp EEEC----
T ss_pred EEeccccc
Confidence 98876554
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.55 E-value=3.3e-05 Score=67.65 Aligned_cols=187 Identities=14% Similarity=0.075 Sum_probs=125.4
Q ss_pred eEEEEecccC--CCeEEEEecCCCCEEEEEeCCCc----eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCE
Q 016134 165 TMLAKLEGHE--KAVSGIALPLRSDKLFSGSRDGT----AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPV 238 (394)
Q Consensus 165 ~~~~~l~~h~--~~V~~l~~s~~~~~l~sgs~Dg~----vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V 238 (394)
+.+.++ .|. .-...|.|+. +.++.+.+.+|. +.|+++++.+........ ..-
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~--------------------~fg 67 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP--------------------YFG 67 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT--------------------CCE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC--------------------cce
Confidence 566666 565 3466899986 666777777663 589999987742211110 111
Q ss_pred EEEEecCCeE-EEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCC
Q 016134 239 TCLAVGRSRL-CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317 (394)
Q Consensus 239 ~~l~~~~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~ 317 (394)
..+++.++.| +..-.++.+.+||.++.+.+.++... ..-..++..++.|+.+..+++|.++|..+.+.+..+......
T Consensus 68 eGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 68 AGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP-GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS-SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC-CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 2334444444 44456899999999999999999743 344677777776666667899999999988777776654321
Q ss_pred c---ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC--------------CcEEEEEECCCC--EEEEE
Q 016134 318 N---GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK--------------HEVRVIEIGPDK--LFFTG 378 (394)
Q Consensus 318 ~---~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--------------~~v~~l~~sp~~--~l~tg 378 (394)
. ....+. + .+|+ +++..-.+..|.+.|..+++.+..+... .-.+.|+++|++ +++||
T Consensus 147 ~~~~~lNeLe--~-~~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 147 RPLDNLNELE--W-VNGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EECCCEEEEE--E-ETTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred cccccceeeE--E-eCCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1 112222 1 2666 6666657889999999999988887631 247999999987 55555
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.53 E-value=2.6e-05 Score=69.00 Aligned_cols=186 Identities=15% Similarity=0.150 Sum_probs=125.6
Q ss_pred eEEEEecccCC--CeEEEEecCCCCEEEEEeCCCc--eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEE
Q 016134 165 TMLAKLEGHEK--AVSGIALPLRSDKLFSGSRDGT--AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTC 240 (394)
Q Consensus 165 ~~~~~l~~h~~--~V~~l~~s~~~~~l~sgs~Dg~--vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~ 240 (394)
+.+.++ .|.. -...|.|+ ++.++.+.+.++. +.|+++++.+... .. + ...-..
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~---------~-----------~~FgeG 100 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL---------G-----------NIFAEG 100 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC---------T-----------TCCEEE
T ss_pred EEEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC---------C-----------CcceeE
Confidence 445555 3443 34788887 4566777777777 4888888765321 11 1 111123
Q ss_pred EEecCCe-EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcc
Q 016134 241 LAVGRSR-LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNG 319 (394)
Q Consensus 241 l~~~~~~-l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~ 319 (394)
+++.++. .+..-.++.+.+||.++.+.+.++... ..-..+++.++.|+.+..+++|.++|..+.+.+..+........
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 4555444 444456899999999999999999743 34467778888888877789999999998887777665432211
Q ss_pred ---eEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC--------------CcEEEEEECCCC--EEEEE
Q 016134 320 ---VLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK--------------HEVRVIEIGPDK--LFFTG 378 (394)
Q Consensus 320 ---~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--------------~~v~~l~~sp~~--~l~tg 378 (394)
...+. +. +|+ +++..-.++.|.+.|..+++.+..+... .-.+.||++|++ +++||
T Consensus 180 v~~lNeLe--~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 180 VELINELE--CA-NGV-IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CCCEEEEE--EE-TTE-EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccccccE--Ee-CCE-EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 12222 22 676 6666667889999999999988887641 357999999987 66665
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.50 E-value=2.8e-08 Score=93.86 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=78.6
Q ss_pred ecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcce
Q 016134 243 VGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGV 320 (394)
Q Consensus 243 ~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~ 320 (394)
..++.+++++.|+.|+.||.++++.+.+++. +.+.+..+. +..+++++.|+.|+.||..+++.+..+....... .
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~-~ 83 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL-V 83 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH-H
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc-c
Confidence 4578999999999999999999999988875 444333222 5577777899999999998877655443221100 0
Q ss_pred EEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 321 LALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 321 ~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
. ...... .+. .|++++.|+.|+.||..+++.+..+..... ..++|++ .|++++.|+.|+.||..+.
T Consensus 84 ~-~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 84 Q-ASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp T-TCSCC-------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSS
T ss_pred c-cCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCC
Confidence 0 000011 233 567788899999999999988766654332 3455666 8889999999999998764
No 233
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.48 E-value=0.00014 Score=67.02 Aligned_cols=186 Identities=9% Similarity=-0.046 Sum_probs=105.9
Q ss_pred CeEEEEecCCCC-EEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec-CCeEEEE
Q 016134 176 AVSGIALPLRSD-KLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-RSRLCSG 251 (394)
Q Consensus 176 ~V~~l~~s~~~~-~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~l~sg 251 (394)
-..+.+|+|++. ++++...++.| ||.++++...+. ....+.++.++ ...++.+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-----------------------~~~~v~~i~~~~dg~l~v~ 106 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-----------------------LPFMGSALAKISDSKQLIA 106 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-----------------------CSSCEEEEEEEETTEEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-----------------------CCCcceEEEEeCCCeEEEE
Confidence 356788999754 45555555664 676666543221 12356667765 3334444
Q ss_pred eCCCeEEEEeCCCCceeEEEcC---C-CCCcEEEEEc--CCEEEEEeCC----CcEEEEEeCCCceeeEeecccCCcceE
Q 016134 252 SMDNTIRVWELDTLEPVMTLND---H-TDAPMSLLCW--DQFLLSCSLD----HTIKVWFATGRGNLEAAYTHKEDNGVL 321 (394)
Q Consensus 252 s~Dg~V~iwd~~~~~~~~~~~~---h-~~~v~~l~~~--~~~l~s~s~D----g~i~vwd~~~~~~~~~~~~~~~~~~~~ 321 (394)
+.+ .|.+||.++++....... . ...+..+.++ +.++++...+ ....||.+.+++ ...+..... ...
T Consensus 107 ~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-~~~~~~~~~--~~~ 182 (326)
T 2ghs_A 107 SDD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-VTKLFADIS--IPN 182 (326)
T ss_dssp ETT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-EEEEEEEES--SEE
T ss_pred ECC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-EEEeeCCCc--ccC
Confidence 444 499999988775433221 1 1346788887 5655544321 223444443333 333222111 111
Q ss_pred EEEeeECCCCCcEEEEEeCCCeEEEEECC--CC-ce--eEEEe----cCCcEEEEEECCCC-EEEEEeCCCeEEEEeCC
Q 016134 322 ALGGLNDPDGKPVLICACNDNTVHLYELP--SF-ME--RGRIF----SKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~I~iwd~~--~~-~~--~~~~~----~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~ 390 (394)
..+++|+++.++++...++.|.+||+. ++ .. ...+. ....+..+++.++| +.++...++.|.+|+..
T Consensus 183 --~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 183 --SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp --EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred --CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 234699998555666677899999986 55 31 11121 13457889999999 55555567889999863
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=2.2e-05 Score=79.96 Aligned_cols=137 Identities=9% Similarity=-0.018 Sum_probs=92.9
Q ss_pred eEEEEeCCCCceeEEEcC--CC-------CCcEEEE--EcC---CEEEEEeCCCcEEEEEeCCCceeeEeecccCC----
Q 016134 256 TIRVWELDTLEPVMTLND--HT-------DAPMSLL--CWD---QFLLSCSLDHTIKVWFATGRGNLEAAYTHKED---- 317 (394)
Q Consensus 256 ~V~iwd~~~~~~~~~~~~--h~-------~~v~~l~--~~~---~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~---- 317 (394)
.|..+|.++++.+..++. |. ....-+. ..+ ..++.++.+|.|.++|.++++.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 599999999999877653 21 1122222 235 67889999999999999999877655422100
Q ss_pred ---cceEE------------------------EEeeECCCCCcEEEEEeC------------------------------
Q 016134 318 ---NGVLA------------------------LGGLNDPDGKPVLICACN------------------------------ 340 (394)
Q Consensus 318 ---~~~~~------------------------~~~~~s~~g~~~l~sgs~------------------------------ 340 (394)
..... -..+++|+.. ++++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC-EEEEeChhcceeeeccccccccccccccccccccccc
Confidence 00000 0124578877 5555432
Q ss_pred -------------CCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCCCC
Q 016134 341 -------------DNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 341 -------------dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~~ 393 (394)
.+.|..||+.+++.+-++.....+....+..++ +++.++.||.+++||+.+..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 278999999999988887765555555555555 88889999999999998753
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.39 E-value=1.5e-05 Score=74.85 Aligned_cols=254 Identities=7% Similarity=-0.079 Sum_probs=147.7
Q ss_pred cccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeec------CCCCCeEEEEEcCCCceEEE
Q 016134 95 IPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVR------GDECRFLHSWFCGEGLTMLA 168 (394)
Q Consensus 95 ~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~------g~~~~~i~iWd~~~~~~~~~ 168 (394)
++-+.|.++....+. ...|.. . .+. ++|++.++..+... |..+.+|.+||..+. +.+.
T Consensus 47 ~vsvID~~t~~v~~~-----------i~vG~~-P--~i~-~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-~vv~ 110 (368)
T 1mda_H 47 ENWVSCAGCGVTLGH-----------SLGAFL-S--LAV-AGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-LPIA 110 (368)
T ss_dssp EEEEEETTTTEEEEE-----------EEECTT-C--EEE-ECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-CEEE
T ss_pred eEEEEECCCCeEEEE-----------EeCCCC-C--ceE-ECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-CEEE
Confidence 566888887776431 222322 1 455 89998887655532 345679999999988 6677
Q ss_pred Eeccc-------CCCeEEEEecCCCCEEEEEeCC--Cc--e--eecCCCcEEEecCC-----CCcEEEEEEcCC-EEEEE
Q 016134 169 KLEGH-------EKAVSGIALPLRSDKLFSGSRD--GT--A--WNIESSAEFSLDGP-----VGEVYSMVVANE-MLFAG 229 (394)
Q Consensus 169 ~l~~h-------~~~V~~l~~s~~~~~l~sgs~D--g~--v--Wd~~~~~~~~~~~~-----~~~v~~l~~~~~-~l~~~ 229 (394)
++.-+ -.....++|+|||++|+.+... .. + +|..+-..+...+. .+.-.-+.++++ .++..
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 76533 1345689999999999998753 22 5 78766111111110 000001222222 11111
Q ss_pred ecCC------C------------CCCEEEEEecCCeEEEEeCCCeEEEEeCCCCc--eeEEEcCC----------CCCcE
Q 016134 230 AQDG------H------------TRPVTCLAVGRSRLCSGSMDNTIRVWELDTLE--PVMTLNDH----------TDAPM 279 (394)
Q Consensus 230 ~~~~------h------------~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~--~~~~~~~h----------~~~v~ 279 (394)
..+. + ..+. . ...+..++..+. +.|.+.|+.+.+ .+..+... .....
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~-~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAA-Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCE-E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCcc-c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 1111 0 0111 1 112455555556 899999986532 22222110 01111
Q ss_pred EEEEc--CCEEEEEeC---------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEe-CCCeEEEE
Q 016134 280 SLLCW--DQFLLSCSL---------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC-NDNTVHLY 347 (394)
Q Consensus 280 ~l~~~--~~~l~s~s~---------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-~dg~I~iw 347 (394)
.+.++ ++.++.+.. +..+.++|+.+.+.+..+..... ...+.++||++.++++.. .++.|.++
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~-----p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD-----SDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE-----ECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC-----cceEEECCCCCEEEEEccCCCCeEEEE
Confidence 13454 666665432 23566999999888777664432 223346999987777777 69999999
Q ss_pred ECCCCceeEEEecCCcEEEEEECCC
Q 016134 348 ELPSFMERGRIFSKHEVRVIEIGPD 372 (394)
Q Consensus 348 d~~~~~~~~~~~~~~~v~~l~~sp~ 372 (394)
|+.+++.+..+........+++.+.
T Consensus 343 D~~t~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 343 DAASDQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp ESSSCEEEEECCCCSCCCEEECCCC
T ss_pred ECCCCcEEEEEECCCCCCEEEeecC
Confidence 9999999988887666777777653
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.38 E-value=3e-05 Score=70.88 Aligned_cols=139 Identities=14% Similarity=0.014 Sum_probs=91.4
Q ss_pred EEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecccCC
Q 016134 240 CLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKED 317 (394)
Q Consensus 240 ~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~ 317 (394)
++... ...++.++.++.|..+|.. ++.+..+......+.++... +..|..++ +.|..+| .+++...........
T Consensus 141 ~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~ 216 (330)
T 3hxj_A 141 TPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWT 216 (330)
T ss_dssp CCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCC
T ss_pred eeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcc
Confidence 33444 5567788888999999998 88777776555667777775 44455555 7899999 665555444332222
Q ss_pred cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC-CcEEEEEECCCCEEEEEeCCCeEEEEeC
Q 016134 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK-HEVRVIEIGPDKLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 318 ~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~v~~l~~sp~~~l~tgs~Dg~I~vWd~ 389 (394)
...+. .++++. |..++.++.|..+|. +++.+..+... ..+..+.+.+++.|..++.++.|..+|.
T Consensus 217 ~~~~~----~~~~g~--l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 217 VTRPA----ISEDGT--IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp CSCCE----ECTTSC--EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEEEECT
T ss_pred eeceE----ECCCCe--EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEEEECC
Confidence 22232 367776 444667888998874 55555555442 2244566666778888889988988885
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.29 E-value=9.6e-05 Score=70.59 Aligned_cols=244 Identities=11% Similarity=0.014 Sum_probs=144.9
Q ss_pred CcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCee------cCCCCCeEEEEEcCCCceEE
Q 016134 94 RIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCV------RGDECRFLHSWFCGEGLTML 167 (394)
Q Consensus 94 ~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~------~g~~~~~i~iWd~~~~~~~~ 167 (394)
.++.+.|.++....... ..|.. . .+. ++|++.++..+.. .|..+..|.++|..+. +.+
T Consensus 99 ~~VsVID~~t~~vv~~I-----------~vG~~-P--gia-~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-~vv 162 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMT-----------DGGFL-P--HPV-AAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-LPI 162 (426)
T ss_dssp EEEEEEETTTTEEEEEE-----------EECSS-C--EEE-ECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-CEE
T ss_pred CeEEEEECCCCEEEEEE-----------ECCCC-C--ceE-ECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-cEE
Confidence 67888888887764311 12222 2 455 8999988765543 2234558999999887 556
Q ss_pred EEeccc-------CCCeEEEEecCCCCEEEEEeCC--Cc--eeecCCCcEEEecCCCCc--------EEEEEEcCC--EE
Q 016134 168 AKLEGH-------EKAVSGIALPLRSDKLFSGSRD--GT--AWNIESSAEFSLDGPVGE--------VYSMVVANE--ML 226 (394)
Q Consensus 168 ~~l~~h-------~~~V~~l~~s~~~~~l~sgs~D--g~--vWd~~~~~~~~~~~~~~~--------v~~l~~~~~--~l 226 (394)
.++.-- ......++|+||+++|+.+... +. +.|+.+++.+......+. -.-+.++++ .+
T Consensus 163 ~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 163 ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLA 242 (426)
T ss_dssp EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEE
Confidence 555321 1345678999999999998753 44 688888887632211111 111344444 33
Q ss_pred EEEecCCCCC------------CE-EEEEec--CCeEEEEeCCCeEEEEeCCCCcee--EEEcC---C-------CCCcE
Q 016134 227 FAGAQDGHTR------------PV-TCLAVG--RSRLCSGSMDNTIRVWELDTLEPV--MTLND---H-------TDAPM 279 (394)
Q Consensus 227 ~~~~~~~h~~------------~V-~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~--~~~~~---h-------~~~v~ 279 (394)
++....++.. ++ ..+.+. +..++..+..+.|.+.|+...... ..+.. . .....
T Consensus 243 ~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~ 322 (426)
T 3c75_H 243 RVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQ 322 (426)
T ss_dssp EEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSS
T ss_pred EEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCce
Confidence 3332111111 00 012233 455566667889999998654321 11110 0 01111
Q ss_pred EEEEc--CCEEEEEeC----------CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEe-CCCeEEE
Q 016134 280 SLLCW--DQFLLSCSL----------DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICAC-NDNTVHL 346 (394)
Q Consensus 280 ~l~~~--~~~l~s~s~----------Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-~dg~I~i 346 (394)
.+.++ ++.+++... ++.|.++|+.+.+.+..+.... ....+.++|+++.++++.. .++.|.+
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 23454 565555432 3579999999998888776433 2233346999984555555 6999999
Q ss_pred EECCCCceeEEE
Q 016134 347 YELPSFMERGRI 358 (394)
Q Consensus 347 wd~~~~~~~~~~ 358 (394)
+|+.+++.+..+
T Consensus 398 ID~~t~kvv~tI 409 (426)
T 3c75_H 398 YDAATGEELRSV 409 (426)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCCEEEEe
Confidence 999999999887
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.29 E-value=0.00074 Score=64.31 Aligned_cols=137 Identities=18% Similarity=0.188 Sum_probs=91.3
Q ss_pred CeEEEEeCCCCceeEEEcCCCC---CcEEEEEc--CCEEEEEe-------------------CCCcEEEEEeCCCceeeE
Q 016134 255 NTIRVWELDTLEPVMTLNDHTD---APMSLLCW--DQFLLSCS-------------------LDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~~---~v~~l~~~--~~~l~s~s-------------------~Dg~i~vwd~~~~~~~~~ 310 (394)
+.|.++|.++++.+.+++.... .-+.+.|+ ++.+++.. .+.+|.+||+.+.+.+..
T Consensus 164 g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp CEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 7899999999999998863222 23446555 67777764 368999999998766666
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEe-----CCCeEEEEECCCCcee--EEE--ec-----------------CCcE
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICAC-----NDNTVHLYELPSFMER--GRI--FS-----------------KHEV 364 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-----~dg~I~iwd~~~~~~~--~~~--~~-----------------~~~v 364 (394)
+...........+...|+|+++..+++.- .+++|.+|....+... ..+ .. ...+
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 55432222333344456999995556555 7789988776554211 111 11 1347
Q ss_pred EEEEECCCC--EEEEEeCCCeEEEEeCCC
Q 016134 365 RVIEIGPDK--LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 365 ~~l~~sp~~--~l~tgs~Dg~I~vWd~~~ 391 (394)
..|.+++|+ ++++.-..+.|.+||+..
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 889999999 455555678999999863
No 239
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.27 E-value=0.0022 Score=66.47 Aligned_cols=227 Identities=10% Similarity=0.080 Sum_probs=141.5
Q ss_pred EEEEEcCCCceEEEEecc-------cCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecC--------CCCcEEE
Q 016134 155 LHSWFCGEGLTMLAKLEG-------HEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDG--------PVGEVYS 218 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~~-------h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~--------~~~~v~~ 218 (394)
|.+||..++ +....... ....|.+|...+++.+.+.. .+|. +||..++....+.. ....|.+
T Consensus 237 l~~~~~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 314 (795)
T 4a2l_A 237 LFLINPKTK-EIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRS 314 (795)
T ss_dssp EEEEETTTT-EEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEE
T ss_pred eEEEeCCCC-eEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CChhheEcCCCCeEEEEecCCCCCCCCCCCcEEE
Confidence 778887665 32222211 13579999999888765544 4575 58887776554321 2356888
Q ss_pred EEEcCC-EEEEEecC----------------C--------CCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 219 MVVANE-MLFAGAQD----------------G--------HTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 219 l~~~~~-~l~~~~~~----------------~--------h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
+....+ .+.+|+.+ . ....|.++..+ ...|..|+.++-|..||..+++......
T Consensus 315 i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 315 IFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp EEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECC
T ss_pred EEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEec
Confidence 888766 66666643 0 13458888887 5568888888889999988765433221
Q ss_pred C--------CCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeeccc---CCcceEEEEeeECCCCCcEEEEEe
Q 016134 273 D--------HTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK---EDNGVLALGGLNDPDGKPVLICAC 339 (394)
Q Consensus 273 ~--------h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~~s~~g~~~l~sgs 339 (394)
. ....|.++..+ +.+|..|..++-|.++|..+++... +.... ....+.++ ..++++. +.+ |+
T Consensus 395 ~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i--~~d~~g~-lwi-gt 469 (795)
T 4a2l_A 395 QEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAI--LPDGEGN-LWL-GT 469 (795)
T ss_dssp C------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEE--EECSSSC-EEE-EE
T ss_pred CCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEE--EECCCCC-EEE-Ee
Confidence 1 23568888876 4437888887889999987654322 22111 11223333 3567777 444 44
Q ss_pred CCCeEEEEECCCCceeEEEe-------cCCcEEEEEECCCCEEEEEeCCCeEEEEeCC
Q 016134 340 NDNTVHLYELPSFMERGRIF-------SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 340 ~dg~I~iwd~~~~~~~~~~~-------~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~ 390 (394)
. +-|.+||..+++...... ....|.++...+++.|..|+. +-|..|+..
T Consensus 470 ~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~ 525 (795)
T 4a2l_A 470 L-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQE 525 (795)
T ss_dssp S-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEE
T ss_pred c-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCC
Confidence 4 458889988764332211 125699999999985555666 457777754
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.26 E-value=0.00043 Score=65.93 Aligned_cols=208 Identities=13% Similarity=0.057 Sum_probs=121.0
Q ss_pred CCCeEEEEEcCCC---ceEEEEec------c-cCCCeEEEEecCCCCEEEEEeCC------Cc--eeecCCCcEEEecCC
Q 016134 151 ECRFLHSWFCGEG---LTMLAKLE------G-HEKAVSGIALPLRSDKLFSGSRD------GT--AWNIESSAEFSLDGP 212 (394)
Q Consensus 151 ~~~~i~iWd~~~~---~~~~~~l~------~-h~~~V~~l~~s~~~~~l~sgs~D------g~--vWd~~~~~~~~~~~~ 212 (394)
.+..|+|.|+.+. .+...+++ . -...-..+...|+| .++++..+ +. +.|.++.+.+.....
T Consensus 104 ~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~ 182 (462)
T 2ece_A 104 RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI 182 (462)
T ss_dssp TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS
T ss_pred CCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc
Confidence 3458999998533 35566653 0 11234567788999 77776655 22 578887777643221
Q ss_pred C----CcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEe-------------------CCCeEEEEeCCCCceeE
Q 016134 213 V----GEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGS-------------------MDNTIRVWELDTLEPVM 269 (394)
Q Consensus 213 ~----~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs-------------------~Dg~V~iwd~~~~~~~~ 269 (394)
. .--+.+.|+|+ ++.+++.. .+.+|.+||+.+++.++
T Consensus 183 ~~~~~~~~Yd~~~~p~--------------------~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 183 DRGDQYLAYDFWWNLP--------------------NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp BCTTCCCCCCEEEETT--------------------TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred CCCCccccceEEECCC--------------------CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 1 11112222222 34444442 47899999999998888
Q ss_pred EEcCCC--CCcEEEEE--c--CCEEEEEe------CCCcEEEEEeCCCce--eeEe--eccc--CC----------cceE
Q 016134 270 TLNDHT--DAPMSLLC--W--DQFLLSCS------LDHTIKVWFATGRGN--LEAA--YTHK--ED----------NGVL 321 (394)
Q Consensus 270 ~~~~h~--~~v~~l~~--~--~~~l~s~s------~Dg~i~vwd~~~~~~--~~~~--~~~~--~~----------~~~~ 321 (394)
++..-. .....+.| + ++++++++ .+++|.+|....++. .+.+ .... .. ....
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 886521 23455656 4 66666555 567888776654321 1111 1100 00 0011
Q ss_pred EEEeeECCCCCcEEEEEeCCCeEEEEECCC---CceeEEEecCC---------------cEEEEEECCCC-EEEEEe
Q 016134 322 ALGGLNDPDGKPVLICACNDNTVHLYELPS---FMERGRIFSKH---------------EVRVIEIGPDK-LFFTGD 379 (394)
Q Consensus 322 ~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~---~~~~~~~~~~~---------------~v~~l~~sp~~-~l~tgs 379 (394)
...+.+++|++.+.++.-..+.|.+||+.. .+.+..+...+ ....++++||| +|+.+.
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 222345999996666666689999999863 34555554431 36889999999 666666
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.18 E-value=0.00021 Score=72.55 Aligned_cols=80 Identities=9% Similarity=0.026 Sum_probs=51.3
Q ss_pred CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcE--EEEEECC
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEV--RVIEIGP 371 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v--~~l~~sp 371 (394)
++.|..||+.+++.+-.......... ..+ ...+. +++.++.|+.|+.||.++++.+..+.....+ .-+.+..
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~-~~~----~t~gg-~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~ 510 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNG-GTL----STAGN-LVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFEL 510 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCC-CEE----EETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcC-cee----EeCCC-EEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEE
Confidence 47899999999887655543322111 112 22455 7888899999999999999998888663322 1223334
Q ss_pred CC--EEEEEe
Q 016134 372 DK--LFFTGD 379 (394)
Q Consensus 372 ~~--~l~tgs 379 (394)
+| +++.++
T Consensus 511 ~G~~yva~~~ 520 (668)
T 1kv9_A 511 AGRQYVAIMA 520 (668)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEEEe
Confidence 66 555554
No 242
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.16 E-value=0.0001 Score=67.08 Aligned_cols=148 Identities=10% Similarity=-0.035 Sum_probs=94.2
Q ss_pred CCEEEEEec--CC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeE
Q 016134 236 RPVTCLAVG--RS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 236 ~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
.......|+ ++ ++++...++.|..|+. +++ +..+..+...+..+.++ ++++++...++.|.+||.. ++ ...
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~~ 120 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AHL 120 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-EEE
Confidence 345566775 45 6777788899999998 444 34455566778889988 5655544456789999875 33 333
Q ss_pred eecccCC---cceEEEEeeECCCCCcEEEE----EeC-------------CCeEEEEECCCCceeEEEecCCcEEEEEEC
Q 016134 311 AYTHKED---NGVLALGGLNDPDGKPVLIC----ACN-------------DNTVHLYELPSFMERGRIFSKHEVRVIEIG 370 (394)
Q Consensus 311 ~~~~~~~---~~~~~~~~~~s~~g~~~l~s----gs~-------------dg~I~iwd~~~~~~~~~~~~~~~v~~l~~s 370 (394)
+...... .... .+.++++|. ++++ |.. .+.|..||..+++..... .......++|+
T Consensus 121 ~~~~~~~~~~~~~~--~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~s 196 (305)
T 3dr2_A 121 LVGRYAGKRLNSPN--DLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFS 196 (305)
T ss_dssp EECEETTEECSCCC--CEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEEC
T ss_pred EEeccCCCccCCCC--CEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEc
Confidence 2221111 1111 123589998 7775 322 256788887666544333 44467889999
Q ss_pred CCC-EEEEEeCC------CeEEEEeCCC
Q 016134 371 PDK-LFFTGDGA------GMLGVWKLLA 391 (394)
Q Consensus 371 p~~-~l~tgs~D------g~I~vWd~~~ 391 (394)
||+ .|+.+... +.|.+|++..
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 999 66666554 7899998753
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.13 E-value=0.00018 Score=63.62 Aligned_cols=147 Identities=12% Similarity=0.015 Sum_probs=102.5
Q ss_pred CCEEEEEecCC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCC-cEEEEEcCC-EEEEEeCCCcEEEEEeCCCceeeEee
Q 016134 236 RPVTCLAVGRS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDA-PMSLLCWDQ-FLLSCSLDHTIKVWFATGRGNLEAAY 312 (394)
Q Consensus 236 ~~V~~l~~~~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~-v~~l~~~~~-~l~s~s~Dg~i~vwd~~~~~~~~~~~ 312 (394)
.....|.|+++ ++.+.+.+|.|+++|+++++.+.++ ..... -..+.+.++ +.+..-.++.+.+||..+.+.+.++.
T Consensus 55 ~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 55 AFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred cccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 44577888754 5667777889999999999988887 32222 244777754 44445568999999999988888877
Q ss_pred cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC------CcEEEEEECCCC-EEEEEeCCCeEE
Q 016134 313 THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK------HEVRVIEIGPDK-LFFTGDGAGMLG 385 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------~~v~~l~~sp~~-~l~tgs~Dg~I~ 385 (394)
...+ ...+ .++++ .|+.+..++.|.++|..+.+.+..+.-. ..++.+.|. +| +++..-.+..|.
T Consensus 134 ~~~e---GwGL----t~Dg~-~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 134 YSGE---GWGL----CYWNG-KLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp CSSC---CCCE----EEETT-EEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred CCCc---eeEE----ecCCC-EEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 5332 1223 24666 4444556899999999999988877651 246778887 66 444444677888
Q ss_pred EEeCCCC
Q 016134 386 VWKLLAK 392 (394)
Q Consensus 386 vWd~~~~ 392 (394)
+.|..+.
T Consensus 205 vIDp~TG 211 (268)
T 3nok_A 205 EIDPATG 211 (268)
T ss_dssp EECTTTC
T ss_pred EEeCCCC
Confidence 8887654
No 244
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.11 E-value=0.0042 Score=54.90 Aligned_cols=212 Identities=10% Similarity=-0.003 Sum_probs=118.6
Q ss_pred eEEEEEcCCCceE----EEEecccCCCeEEEEecCCCCEEEEEeC-CCce--eecCCCcEEEecCCCCcEEEEEEcCCEE
Q 016134 154 FLHSWFCGEGLTM----LAKLEGHEKAVSGIALPLRSDKLFSGSR-DGTA--WNIESSAEFSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 154 ~i~iWd~~~~~~~----~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l 226 (394)
.|+.+++...... ...+......+..++|++++..|+.+.. ++.| ++.+......+..
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--------------- 75 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR--------------- 75 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC---------------
T ss_pred eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE---------------
Confidence 5777777544210 1122222346789999997766665554 4444 5554433221110
Q ss_pred EEEecCCCCCCEEEEEec--CCeE-EEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC---CCcEE
Q 016134 227 FAGAQDGHTRPVTCLAVG--RSRL-CSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL---DHTIK 298 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~--~~~l-~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~---Dg~i~ 298 (394)
........++++ ++.| ++-...+.|.++++........+.........++++ +..|+.+.. .+.|.
T Consensus 76 ------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 76 ------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp ------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred ------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEE
Confidence 111345666765 3444 444556789999987533222222222456888887 466655554 36788
Q ss_pred EEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEE
Q 016134 299 VWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~t 377 (394)
.+++.. .....+... ...... .+++++++..++++-...+.|.++|+........+........++.. ++ ++++
T Consensus 150 ~~~~dg-~~~~~~~~~-~~~~P~--gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva 224 (267)
T 1npe_A 150 TSHMDG-TNRRILAQD-NLGLPN--GLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYT 224 (267)
T ss_dssp EEETTS-CCCEEEECT-TCSCEE--EEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEE
T ss_pred EEecCC-CCcEEEEEC-CCCCCc--EEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEE
Confidence 888753 222222211 111222 23458877757777777889999999765433333333445677765 44 5555
Q ss_pred EeCCCeEEEEeCCC
Q 016134 378 GDGAGMLGVWKLLA 391 (394)
Q Consensus 378 gs~Dg~I~vWd~~~ 391 (394)
....+.|.++|..+
T Consensus 225 ~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 225 DWKTNSVIAMDLAI 238 (267)
T ss_dssp ETTTTEEEEEETTT
T ss_pred ECCCCeEEEEeCCC
Confidence 55678899998764
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.08 E-value=0.004 Score=64.46 Aligned_cols=232 Identities=10% Similarity=0.025 Sum_probs=142.4
Q ss_pred eEEEEEcCCCceEEEE-ecccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecC--------CCCcEEEEEEcC
Q 016134 154 FLHSWFCGEGLTMLAK-LEGHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDG--------PVGEVYSMVVAN 223 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~-l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~--------~~~~v~~l~~~~ 223 (394)
-|..|+..++ +.... ...+...|.+|...+++.+.+....+|. +||..+++...... ....|.++...+
T Consensus 194 Gl~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 272 (795)
T 4a2l_A 194 GLYTYSITQK-TFEKVIPILGTKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS 272 (795)
T ss_dssp CEEEEETTTC-CEEECC----CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT
T ss_pred CEEEEeCCCC-eEEEecCCCCCCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC
Confidence 3677887654 22221 1124567999998888776665545565 58877766554322 235688888775
Q ss_pred C-EEEEEecCC------------------------CCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEcC----
Q 016134 224 E-MLFAGAQDG------------------------HTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLND---- 273 (394)
Q Consensus 224 ~-~l~~~~~~~------------------------h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~---- 273 (394)
+ .+.+|+..+ ....|.++..+ ...|..|+.++-|..|+..+.+. ..+..
T Consensus 273 ~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~ 351 (795)
T 4a2l_A 273 QNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRF-KNIRNIPYK 351 (795)
T ss_dssp TSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSS-EEECCCTTS
T ss_pred CCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccc-eEEcCCCCC
Confidence 5 555555331 12468888887 56688888888899998765442 22221
Q ss_pred ---CCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecc------cCCcceEEEEeeECCCCCcEEEEEeCCCe
Q 016134 274 ---HTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTH------KEDNGVLALGGLNDPDGKPVLICACNDNT 343 (394)
Q Consensus 274 ---h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~s~~g~~~l~sgs~dg~ 343 (394)
....|.++..+ ...|..|..++-|..||..++......... .....+.++ ..++++. +|..|+.++-
T Consensus 352 ~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i--~~d~~g~-~lWigt~~~G 428 (795)
T 4a2l_A 352 NSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV--YVDEKKS-LVYIGTHAGG 428 (795)
T ss_dssp SSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEE--EEETTTT-EEEEEETTTE
T ss_pred CCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE--EEcCCCC-EEEEEeCcCc
Confidence 23468888887 456777888878999997655432221111 011233333 3456676 4666777788
Q ss_pred EEEEECCCCceeEEEe-----cCCcEEEEEECCCCEEEEEeCCCeEEEEeCCC
Q 016134 344 VHLYELPSFMERGRIF-----SKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 344 I~iwd~~~~~~~~~~~-----~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
|.+||..+++...... ....|.++...+++.|..|+.+ -|.+|+..+
T Consensus 429 l~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~-Gl~~~~~~~ 480 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLS-ALVRFNPEQ 480 (795)
T ss_dssp EEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESS-CEEEEETTT
T ss_pred eeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecC-ceeEEeCCC
Confidence 9999998765432221 1356999999888866666664 477787654
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.07 E-value=0.00079 Score=59.88 Aligned_cols=148 Identities=11% Similarity=-0.016 Sum_probs=104.2
Q ss_pred CEEEEEecC-CeEEEEeC---CCeEEEEeCCCCceeEEEcCCCC-CcEEEEEcCCEEEEEe-CCCcEEEEEeCCCceeeE
Q 016134 237 PVTCLAVGR-SRLCSGSM---DNTIRVWELDTLEPVMTLNDHTD-APMSLLCWDQFLLSCS-LDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 237 ~V~~l~~~~-~~l~sgs~---Dg~V~iwd~~~~~~~~~~~~h~~-~v~~l~~~~~~l~s~s-~Dg~i~vwd~~~~~~~~~ 310 (394)
....|.|++ ..|+.++. ++.|+++|+.+++.+.++..... ....+++.++.|+... .++.+.++|..+.+.+..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEE
Confidence 457788875 56655542 58999999999999988753222 2346777776665555 578999999998888877
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC------CcEEEEEECCCC-EEEEEeCCCe
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK------HEVRVIEIGPDK-LFFTGDGAGM 383 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------~~v~~l~~sp~~-~l~tgs~Dg~ 383 (394)
+... .+. ...+ +++++.++++ ..++.|.++|..+.+.+..+.-. ..++.+.|. ++ .++....++.
T Consensus 102 i~~g-~~~-g~gl----t~Dg~~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 102 FTHQ-MKD-GWGL----ATDGKILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EECC-SSS-CCEE----EECSSSEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EECC-CCC-eEEE----EECCCEEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 6543 122 2333 4577755554 46889999999999888887642 137788888 77 5555556789
Q ss_pred EEEEeCCCC
Q 016134 384 LGVWKLLAK 392 (394)
Q Consensus 384 I~vWd~~~~ 392 (394)
|.+.|..+.
T Consensus 174 V~vID~~tg 182 (266)
T 2iwa_A 174 IARISAKDG 182 (266)
T ss_dssp EEEEETTTC
T ss_pred EEEEECCCC
Confidence 999998764
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.07 E-value=0.00023 Score=70.08 Aligned_cols=197 Identities=11% Similarity=0.025 Sum_probs=116.6
Q ss_pred CCCCEEEEEeCCCc---eeecCCCcEEEec--CCCCcEEEEEE-c-CC--EEEEEecCCCCCCEEEEEecCCeEEE-EeC
Q 016134 184 LRSDKLFSGSRDGT---AWNIESSAEFSLD--GPVGEVYSMVV-A-NE--MLFAGAQDGHTRPVTCLAVGRSRLCS-GSM 253 (394)
Q Consensus 184 ~~~~~l~sgs~Dg~---vWd~~~~~~~~~~--~~~~~v~~l~~-~-~~--~l~~~~~~~h~~~V~~l~~~~~~l~s-gs~ 253 (394)
+||++|+....+.. +-|+++.++..+. ........+++ . |+ +++++..... ++ .-++..|.. --.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~--p~---~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDET--PL---VNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCE--ES---SCSSSSTTCGGGE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEeccccc--cc---CCCCccccccccc
Confidence 48888888877765 5888888866421 11233555555 2 33 4444432100 00 000111111 123
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEE--cCCEEEEEeCCC------------------------------------
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLC--WDQFLLSCSLDH------------------------------------ 295 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg------------------------------------ 295 (394)
++.+.+.|.++.+.+.++.--. ...-+++ .++++++.+.+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4567778888777776665211 2222333 366666666442
Q ss_pred --cEEEEEeCC--Cce-eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc------------eeEEE
Q 016134 296 --TIKVWFATG--RGN-LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM------------ERGRI 358 (394)
Q Consensus 296 --~i~vwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~------------~~~~~ 358 (394)
.|.+.|.++ ++. +..+.....++. +.++|||+++++++..+.+|.++|+.+.+ ....+
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipvg~~PhG-----v~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v 327 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPIANNPHG-----CNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP 327 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEEESSCCC-----EEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC
T ss_pred ECcEEEEeCcccCCceeEEEEecCCCceE-----EEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc
Confidence 466777765 333 333333333222 23599999888888889999999999653 33444
Q ss_pred ecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 359 FSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 359 ~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
........++|+|+| .+++.-.|++|.+|++..
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 446679999999999 666777899999999865
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.00065 Score=59.93 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=101.0
Q ss_pred CEEEEEecCC-eEEEEeCCC--eEEEEeCCCCceeEEEcCCCCCc-EEEEEcCCEEEEEe-CCCcEEEEEeCCCceeeEe
Q 016134 237 PVTCLAVGRS-RLCSGSMDN--TIRVWELDTLEPVMTLNDHTDAP-MSLLCWDQFLLSCS-LDHTIKVWFATGRGNLEAA 311 (394)
Q Consensus 237 ~V~~l~~~~~-~l~sgs~Dg--~V~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~l~s~s-~Dg~i~vwd~~~~~~~~~~ 311 (394)
....|.|+++ ++.+.+.+| .|+++|+++++.+.++....... ..+.+.++.|.... .++.+.+||..+.+.+.++
T Consensus 44 ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred ccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 3467777744 455666665 99999999999998886543322 44677766655554 5889999999998888877
Q ss_pred ecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC------CcEEEEEECCCC-EEEEEeCCCeE
Q 016134 312 YTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK------HEVRVIEIGPDK-LFFTGDGAGML 384 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------~~v~~l~~sp~~-~l~tgs~Dg~I 384 (394)
..... ...+ .++++.++++ ..++.|.++|..+++.+..+.-. ..++.+.|. +| +++..-.+..|
T Consensus 124 ~~~~e---G~gl----t~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 124 NYDGE---GWGL----THNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp ECSSC---CCCE----EECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred ECCCC---ceEE----ecCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 65332 1223 2456645554 44788999999999888887651 235667876 67 44444467788
Q ss_pred EEEeCCCC
Q 016134 385 GVWKLLAK 392 (394)
Q Consensus 385 ~vWd~~~~ 392 (394)
.+.|..+.
T Consensus 195 ~vIDp~tG 202 (262)
T 3nol_A 195 VRIDPETG 202 (262)
T ss_dssp EEECTTTC
T ss_pred EEEECCCC
Confidence 88887654
No 249
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.96 E-value=0.0014 Score=67.45 Aligned_cols=196 Identities=9% Similarity=0.024 Sum_probs=103.8
Q ss_pred ceeeecccc-ccccccCCCee-cCCCCCeEEEEEcCCC-ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-----e-
Q 016134 128 TSKKTTLKN-VCCHWLLGNCV-RGDECRFLHSWFCGEG-LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-----A- 198 (394)
Q Consensus 128 ~v~~~~~~~-~~~~~~~~~~~-~g~~~~~i~iWd~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-----v- 198 (394)
.+.... ++ |++.++|-... +|+....|+++|+.++ ..+...+. .....++|+||++.|+-...|.. |
T Consensus 175 ~~~~~~-~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVK-PAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEE-ECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeE-ecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 566666 99 99999875544 3445557999999876 42111121 12356899999988887776532 3
Q ss_pred -eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEEEEe---CCCeEEEEeCCCCc-ee--E
Q 016134 199 -WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLCSGS---MDNTIRVWELDTLE-PV--M 269 (394)
Q Consensus 199 -Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~sgs---~Dg~V~iwd~~~~~-~~--~ 269 (394)
+++.+++.. +.++... ........+.|+ +++|+..+ ....|.++|+.+++ .. .
T Consensus 251 ~~~lgt~~~~----------------~~lv~~~--~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~ 312 (751)
T 2xe4_A 251 RHVMGKLQSE----------------DVCLYEE--HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLE 312 (751)
T ss_dssp EEETTSCGGG----------------CEEEEEC--CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEE
T ss_pred EEECCCCchh----------------cEEEEec--CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeE
Confidence 444443210 0000000 111223445555 44544433 23468888988752 22 3
Q ss_pred EE-cCCCCCcEEEEEc-CCEEEEEe-CC--C--cEEEEEeCCCceeeE-eecccCCcceEEEEeeECCCCCcEEEEEeCC
Q 016134 270 TL-NDHTDAPMSLLCW-DQFLLSCS-LD--H--TIKVWFATGRGNLEA-AYTHKEDNGVLALGGLNDPDGKPVLICACND 341 (394)
Q Consensus 270 ~~-~~h~~~v~~l~~~-~~~l~s~s-~D--g--~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d 341 (394)
.+ ........++.|. ++.|+..+ .+ + .|..+|+.+...... +..+........+ ++.+..++++...+
T Consensus 313 ~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~----~~~~~~lv~~~~~~ 388 (751)
T 2xe4_A 313 IVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESI----AVRSNYLVVAGRRA 388 (751)
T ss_dssp ESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEE----EECSSEEEEEEEET
T ss_pred EeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEE----EEECCEEEEEEEeC
Confidence 33 3345566777754 66555444 33 2 566666654222222 3333322222222 23345477788888
Q ss_pred CeEE--EEEC
Q 016134 342 NTVH--LYEL 349 (394)
Q Consensus 342 g~I~--iwd~ 349 (394)
+..+ ++++
T Consensus 389 g~~~l~~~dl 398 (751)
T 2xe4_A 389 GLTRIWTMMA 398 (751)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 8654 5564
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.90 E-value=0.0013 Score=66.70 Aligned_cols=152 Identities=12% Similarity=0.031 Sum_probs=95.6
Q ss_pred EEec--CCeEEEEeCCC-------------------eEEEEeCCCCceeEEEcC--CC-------CCcE--EEEEcCC--
Q 016134 241 LAVG--RSRLCSGSMDN-------------------TIRVWELDTLEPVMTLND--HT-------DAPM--SLLCWDQ-- 286 (394)
Q Consensus 241 l~~~--~~~l~sgs~Dg-------------------~V~iwd~~~~~~~~~~~~--h~-------~~v~--~l~~~~~-- 286 (394)
++++ .++++.++.++ .|..+|.++++.+..++. |. .++. .+.+.++
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~ 314 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPR 314 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEE
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEE
Confidence 3443 46677776665 499999999999877764 22 2222 2333454
Q ss_pred -EEEEEeCCCcEEEEEeCCCceeeEeecccCC---------------------c-ceEEE----------EeeECCCCCc
Q 016134 287 -FLLSCSLDHTIKVWFATGRGNLEAAYTHKED---------------------N-GVLAL----------GGLNDPDGKP 333 (394)
Q Consensus 287 -~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~---------------------~-~~~~~----------~~~~s~~g~~ 333 (394)
.++.++.+|.+.++|..+++.+......... . ....+ ..+++|+..
T Consensus 315 ~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g- 393 (668)
T 1kv9_A 315 KVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTG- 393 (668)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTT-
T ss_pred EEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCC-
Confidence 6888999999999999998876433221100 0 00000 023466655
Q ss_pred EEEEE------------------------------------eCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEE
Q 016134 334 VLICA------------------------------------CNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFF 376 (394)
Q Consensus 334 ~l~sg------------------------------------s~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~ 376 (394)
++... ..++.|..||+.+++.+-++.....+....+...+ +++
T Consensus 394 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf 473 (668)
T 1kv9_A 394 LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVF 473 (668)
T ss_dssp EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEE
T ss_pred EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEE
Confidence 33221 13488999999999988777664444333333344 888
Q ss_pred EEeCCCeEEEEeCCCCC
Q 016134 377 TGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 377 tgs~Dg~I~vWd~~~~~ 393 (394)
.++.|+.|++||..+.+
T Consensus 474 ~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 474 QGTAAGQMHAYSADKGE 490 (668)
T ss_dssp EECTTSEEEEEETTTCC
T ss_pred EECCcccchhhhhhcCh
Confidence 99999999999987653
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.89 E-value=0.0029 Score=55.20 Aligned_cols=149 Identities=13% Similarity=0.037 Sum_probs=101.8
Q ss_pred CCCEEEEEecCCeE-EEEeCC--CeEEEEeCCCCceeEEEcCCCCCc-EEEEEcCCEEEE-EeCCCcEEEEEeCCCceee
Q 016134 235 TRPVTCLAVGRSRL-CSGSMD--NTIRVWELDTLEPVMTLNDHTDAP-MSLLCWDQFLLS-CSLDHTIKVWFATGRGNLE 309 (394)
Q Consensus 235 ~~~V~~l~~~~~~l-~sgs~D--g~V~iwd~~~~~~~~~~~~h~~~v-~~l~~~~~~l~s-~s~Dg~i~vwd~~~~~~~~ 309 (394)
......|.|+++.| .+.+.+ ..|+++|+++++.+.++....... ..+...++.|.. .-.++.+.+||..+.+.+.
T Consensus 20 ~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ 99 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRA 99 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEE
T ss_pred ccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEE
Confidence 34567888886654 444554 499999999999998886443322 456666655544 4468999999999988888
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC------CcEEEEEECCCC-EEEEEeCCC
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK------HEVRVIEIGPDK-LFFTGDGAG 382 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~------~~v~~l~~sp~~-~l~tgs~Dg 382 (394)
++..... ...+ .++++.++++ ..++.|.++|..+.+.+..+.-. ..++.+.+. +| .++..-.+.
T Consensus 100 ti~~~~~---Gwgl----t~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~ 170 (243)
T 3mbr_X 100 RFRYPGE---GWAL----TSDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTS 170 (243)
T ss_dssp EEECSSC---CCEE----EECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTT
T ss_pred EEeCCCC---ceEE----eeCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCC
Confidence 7765432 2333 2356645555 45889999999999888877652 346777776 56 444444677
Q ss_pred eEEEEeCCCC
Q 016134 383 MLGVWKLLAK 392 (394)
Q Consensus 383 ~I~vWd~~~~ 392 (394)
.|.+.|..+.
T Consensus 171 ~I~vIDp~tG 180 (243)
T 3mbr_X 171 RIARIDPASG 180 (243)
T ss_dssp EEEEECTTTC
T ss_pred eEEEEECCCC
Confidence 8888887654
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.86 E-value=0.013 Score=51.75 Aligned_cols=191 Identities=14% Similarity=0.048 Sum_probs=108.4
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC-CCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEE
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAG 229 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~ 229 (394)
+.|.+++.... .....+.........|++++++..|+.+.. .+.| ++++......+..
T Consensus 58 ~~I~~~~~~g~-~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~------------------ 118 (267)
T 1npe_A 58 PSIGRASLHGG-EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD------------------ 118 (267)
T ss_dssp TEEEEEESSSC-CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------------
T ss_pred CEEEEEecCCC-CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEE------------------
Confidence 48889998655 222333333357889999997766665554 3443 4444322111100
Q ss_pred ecCCCCCCEEEEEec--CCeEEEEeC---CCeEEEEeCCCCceeEEE-cCCCCCcEEEEEc--CCEEEEE-eCCCcEEEE
Q 016134 230 AQDGHTRPVTCLAVG--RSRLCSGSM---DNTIRVWELDTLEPVMTL-NDHTDAPMSLLCW--DQFLLSC-SLDHTIKVW 300 (394)
Q Consensus 230 ~~~~h~~~V~~l~~~--~~~l~sgs~---Dg~V~iwd~~~~~~~~~~-~~h~~~v~~l~~~--~~~l~s~-s~Dg~i~vw 300 (394)
........++++ +..|+.+.. .+.|..+++.. +....+ .........++++ +..|+.+ ...+.|.++
T Consensus 119 ---~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 119 ---TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp ---SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ---CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 011234566665 344444443 36788888764 323333 2233456788887 4555444 456789999
Q ss_pred EeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCC--cEEEEEECCCC
Q 016134 301 FATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKH--EVRVIEIGPDK 373 (394)
Q Consensus 301 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~--~v~~l~~sp~~ 373 (394)
|+........... ......++ . ++..++++....+.|.++|..+++.+..+.... ....+++.|++
T Consensus 195 ~~~g~~~~~~~~~---~~~P~gi~--~--d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 195 NPAQPGRRKVLEG---LQYPFAVT--S--YGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQ 262 (267)
T ss_dssp ETTEEEEEEEEEC---CCSEEEEE--E--ETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSC
T ss_pred ecCCCceEEEecC---CCCceEEE--E--eCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCcc
Confidence 9864332222211 11222332 2 334366666677899999999998888876532 46778888775
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.83 E-value=0.0027 Score=62.48 Aligned_cols=232 Identities=14% Similarity=0.054 Sum_probs=139.1
Q ss_pred cccccccCCCeecCCCCCeEEEEEcCCCceEEEEecc-cCCCeEEEEe-c-CCCCEEEEEeC-------CCc--------
Q 016134 136 NVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEG-HEKAVSGIAL-P-LRSDKLFSGSR-------DGT-------- 197 (394)
Q Consensus 136 ~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~-h~~~V~~l~~-s-~~~~~l~sgs~-------Dg~-------- 197 (394)
.+++.|+...... +..|.+-|+.+. +....+.- ....+..+++ . |++++++.++. ||.
T Consensus 98 ~~DG~~lfVnd~~---~~rVavIdl~t~-~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 98 KYDGRFLFMNDKA---NTRVARVRCDVM-KCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEEETT---TTEEEEEETTTT-EEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CcCCCEEEEEcCC---CCEEEEEECCCc-eEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 3477777653332 337889999876 65664432 2346889998 5 99999999863 222
Q ss_pred -----eeecCCCcEEEecCCCCcEEEEEEcCC--EEEEEecCCCC------------CCEEEEEe--------cCCeEEE
Q 016134 198 -----AWNIESSAEFSLDGPVGEVYSMVVANE--MLFAGAQDGHT------------RPVTCLAV--------GRSRLCS 250 (394)
Q Consensus 198 -----vWd~~~~~~~~~~~~~~~v~~l~~~~~--~l~~~~~~~h~------------~~V~~l~~--------~~~~l~s 250 (394)
+.|.++.+........+.-..++++++ .+++.+.+... ..|.-+.+ .+++...
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 577777766522111113345667776 77777765322 12222222 1444433
Q ss_pred EeCCCeEEEEeCCC--Cce-eEEEcCCCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCCCcee---------eEeeccc
Q 016134 251 GSMDNTIRVWELDT--LEP-VMTLNDHTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATGRGNL---------EAAYTHK 315 (394)
Q Consensus 251 gs~Dg~V~iwd~~~--~~~-~~~~~~h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~~~~~---------~~~~~~~ 315 (394)
+.|.|.|.++ ++. +..+.. .....++.++ |+++++++ .+.+|.++|+.+.+.. .......
T Consensus 254 ----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 254 ----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp ----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred ----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC
Confidence 5599999998 555 555543 2345667777 77666655 5889999999854210 0011111
Q ss_pred CCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC----------CceeEEEecCCcEE------EEEECCCC-EEEEE
Q 016134 316 EDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS----------FMERGRIFSKHEVR------VIEIGPDK-LFFTG 378 (394)
Q Consensus 316 ~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~----------~~~~~~~~~~~~v~------~l~~sp~~-~l~tg 378 (394)
...-.+...|+++| ...++.-.|++|.+||+.+ .+.+..+.-...+- .+.++||| +|++.
T Consensus 329 --vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 329 --LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp --CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred --CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 22223344589999 5888899999999999987 44555554433321 22457899 66665
Q ss_pred e
Q 016134 379 D 379 (394)
Q Consensus 379 s 379 (394)
.
T Consensus 406 N 406 (595)
T 1fwx_A 406 S 406 (595)
T ss_dssp E
T ss_pred C
Confidence 4
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.83 E-value=0.0063 Score=60.75 Aligned_cols=80 Identities=9% Similarity=-0.105 Sum_probs=49.8
Q ss_pred CCCcEEEEEeCCCceeeEeecccCC-cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcE--EEEEE
Q 016134 293 LDHTIKVWFATGRGNLEAAYTHKED-NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEV--RVIEI 369 (394)
Q Consensus 293 ~Dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v--~~l~~ 369 (394)
.++.|..||+.+++.+-........ ...+. ..+. +++.++.|+.|+.||.++++++-++.....+ .-+.+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~------tagg-~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y 523 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMA------TAGD-LVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTY 523 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEE------ETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceE------ecCC-EEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEE
Confidence 3478999999888766554322111 11122 1344 6777999999999999999999887653221 12344
Q ss_pred CCCC--EEEEEe
Q 016134 370 GPDK--LFFTGD 379 (394)
Q Consensus 370 sp~~--~l~tgs 379 (394)
..+| ++++.+
T Consensus 524 ~~~G~qyv~~~~ 535 (599)
T 1w6s_A 524 THKGTQYVAIYY 535 (599)
T ss_dssp EETTEEEEEEEE
T ss_pred EeCCEEEEEEEc
Confidence 4577 555543
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.78 E-value=0.0094 Score=59.36 Aligned_cols=80 Identities=15% Similarity=0.074 Sum_probs=52.8
Q ss_pred CCcEEEEEeCCCceeeEeecccCCc-ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEE--EEEC
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDN-GVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRV--IEIG 370 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~--l~~s 370 (394)
++.|..||+.+++.+-......... ..+.. .+. +++.++.|+.|+.||.++++++-++.....+.+ +.+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t------agg-lvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~ 537 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT------AGN-LVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWE 537 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEE------TTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEe------CCC-EEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEE
Confidence 5789999999887765544322111 12221 344 677799999999999999999988877444332 5555
Q ss_pred CCC--EEEEEeC
Q 016134 371 PDK--LFFTGDG 380 (394)
Q Consensus 371 p~~--~l~tgs~ 380 (394)
.+| ++++.+.
T Consensus 538 ~~G~qYv~~~~G 549 (582)
T 1flg_A 538 QDGEQYLGVTVG 549 (582)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEEcc
Confidence 677 5554433
No 256
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.77 E-value=0.038 Score=56.89 Aligned_cols=211 Identities=11% Similarity=0.036 Sum_probs=128.8
Q ss_pred CCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEec----------CCCCcEEEEEEcCC-EEEEEecC---------
Q 016134 174 EKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLD----------GPVGEVYSMVVANE-MLFAGAQD--------- 232 (394)
Q Consensus 174 ~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~----------~~~~~v~~l~~~~~-~l~~~~~~--------- 232 (394)
...|.+|...+++.+-+..-..|. .++..+....... .....|.++...++ .+.+|+.+
T Consensus 312 ~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~ 391 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENG 391 (781)
T ss_dssp SSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETT
T ss_pred CCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECC
Confidence 467999999988875543334554 4666655433221 12356888887765 56666532
Q ss_pred ------------CCCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEEc---CCCCCcEEEEEc-CCEEEEEeCCC
Q 016134 233 ------------GHTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTLN---DHTDAPMSLLCW-DQFLLSCSLDH 295 (394)
Q Consensus 233 ------------~h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~---~h~~~v~~l~~~-~~~l~s~s~Dg 295 (394)
.....|.++..+ ...|..|+.++-|..+|.++++.. .+. .....|.++... ...|..+.. +
T Consensus 392 ~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt~-~ 469 (781)
T 3v9f_A 392 KRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGTH-A 469 (781)
T ss_dssp EEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEET-T
T ss_pred CCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEEC-C
Confidence 123568888876 566777888778999998776543 332 134678888877 556777776 5
Q ss_pred cEEEEEeCCCceeeEeecccC---CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-----CCcEEEE
Q 016134 296 TIKVWFATGRGNLEAAYTHKE---DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-----KHEVRVI 367 (394)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-----~~~v~~l 367 (394)
-|.++|..+.+.......... ...+.+ +..+++|. +.+ |+.++-|..||..+.+. ..+.. ...|.++
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~--i~~d~~g~-lWi-gt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i 544 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRS--IAQDSEGR-FWI-GTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQI 544 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEE--EEECTTCC-EEE-EESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEE
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEE--EEEcCCCC-EEE-EEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEE
Confidence 688899876543322211100 122333 33577887 444 55544577888876543 33322 3468999
Q ss_pred EECCCCEEEEEeCCCeEEEEeCCC
Q 016134 368 EIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 368 ~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
...++|.|..++.+|.|..||..+
T Consensus 545 ~~d~~g~lWi~T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 545 YRSSKGQMWLATGEGLVCFPSARN 568 (781)
T ss_dssp EECTTSCEEEEETTEEEEESCTTT
T ss_pred EECCCCCEEEEECCCceEEECCCC
Confidence 999998666666666547777554
No 257
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.77 E-value=0.0039 Score=61.97 Aligned_cols=81 Identities=11% Similarity=-0.086 Sum_probs=50.3
Q ss_pred CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEE--EEEECC
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVR--VIEIGP 371 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~--~l~~sp 371 (394)
++.|..||+.+++.+-.......... ..+ ...+. +++.++.|+.|+.+|.++++++.++.....+. -+.+..
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~~~~-~~~----~t~gg-~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFAAWG-GTL----YTKGG-LVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCS-BCE----EETTT-EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCCccc-eeE----EECCC-EEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 57899999988877655543221111 111 11344 56668999999999999999998887643321 233446
Q ss_pred CC--EEEEEeC
Q 016134 372 DK--LFFTGDG 380 (394)
Q Consensus 372 ~~--~l~tgs~ 380 (394)
++ ++++.+.
T Consensus 517 ~G~~yv~~~~G 527 (571)
T 2ad6_A 517 KGKQYIGSMYG 527 (571)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEECC
Confidence 77 4444433
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.71 E-value=0.0054 Score=60.98 Aligned_cols=138 Identities=12% Similarity=0.033 Sum_probs=86.2
Q ss_pred CeEEEEeCCCCceeEEEcC--CC--------CCcE-EEEEcC---CEEEEEeCCCcEEEEEeCCCceeeEeecccCCc--
Q 016134 255 NTIRVWELDTLEPVMTLND--HT--------DAPM-SLLCWD---QFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDN-- 318 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~--h~--------~~v~-~l~~~~---~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~-- 318 (394)
+.|..+|.++++.+-.++. |. .++. .....+ ..++.++.+|.+.++|..+++.+..........
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 3699999999998877753 21 1221 111234 357778889999999999888765543221000
Q ss_pred --------c--------------eEEE-----------EeeECCCCCcEEEEEe--------------------------
Q 016134 319 --------G--------------VLAL-----------GGLNDPDGKPVLICAC-------------------------- 339 (394)
Q Consensus 319 --------~--------------~~~~-----------~~~~s~~g~~~l~sgs-------------------------- 339 (394)
. .... ..+++|+.. +|....
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccce
Confidence 0 0000 123567666 444332
Q ss_pred -----------CCCeEEEEECCCCceeEEEecCCcEEEEEEC-CCCEEEEEeCCCeEEEEeCCCCC
Q 016134 340 -----------NDNTVHLYELPSFMERGRIFSKHEVRVIEIG-PDKLFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 340 -----------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~s-p~~~l~tgs~Dg~I~vWd~~~~~ 393 (394)
.++.|..||+.+++.+-++.....+....+. .+++++.++.|+.|+.||..+..
T Consensus 431 ~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp EEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 3578999999999888777654443332222 24578889999999999987653
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.025 Score=58.31 Aligned_cols=230 Identities=13% Similarity=0.080 Sum_probs=133.4
Q ss_pred EEEEEcCCCceEEEEec-------ccCCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEec---------------C
Q 016134 155 LHSWFCGEGLTMLAKLE-------GHEKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLD---------------G 211 (394)
Q Consensus 155 i~iWd~~~~~~~~~~l~-------~h~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~---------------~ 211 (394)
|.+||..++ +...... -....|.+|...+++.+.+....+|. ++|..+....... -
T Consensus 232 l~~~d~~~~-~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l 310 (781)
T 3v9f_A 232 LALFNANTE-TFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSL 310 (781)
T ss_dssp EEEEETTTT-EEEC-----------CCCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSB
T ss_pred HheECCCCC-cEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCC
Confidence 777887654 2221111 12467999999888765554433665 5777665533211 1
Q ss_pred CCCcEEEEEEcCC-EEEEEecC----------------C-----------CCCCEEEEEec-CCeEEEEeCCCeEEEEeC
Q 016134 212 PVGEVYSMVVANE-MLFAGAQD----------------G-----------HTRPVTCLAVG-RSRLCSGSMDNTIRVWEL 262 (394)
Q Consensus 212 ~~~~v~~l~~~~~-~l~~~~~~----------------~-----------h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~ 262 (394)
....|.++....+ .+.+|+.+ . ....|.++..+ ...|..|+.++-|.+||.
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~ 390 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFEN 390 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEET
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEEC
Confidence 2356788877665 55566532 0 12458888877 467888887777999998
Q ss_pred CCCceeEEE---cCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecc-cCCcceEEEEeeECCCCCcEEEE
Q 016134 263 DTLEPVMTL---NDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTH-KEDNGVLALGGLNDPDGKPVLIC 337 (394)
Q Consensus 263 ~~~~~~~~~---~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~g~~~l~s 337 (394)
.+++..... ......|.++... ...|..+..++-|..+|..+++.. .+... .....+.++ ..++++. +.+
T Consensus 391 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i--~~d~~g~-lwi- 465 (781)
T 3v9f_A 391 GKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVF--YEDKNKK-IWI- 465 (781)
T ss_dssp TEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEE--EECTTSE-EEE-
T ss_pred CCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEE--EECCCCC-EEE-
Confidence 754322111 1234568888877 556667777777888987655332 22111 111233333 3466776 433
Q ss_pred EeCCCeEEEEECCCCceeEEEec------CCcEEEEEECCCCEEEEEeCCCeEEEEeCCC
Q 016134 338 ACNDNTVHLYELPSFMERGRIFS------KHEVRVIEIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 338 gs~dg~I~iwd~~~~~~~~~~~~------~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
|+. +-|.+||..+++....... ...|.++...+++.|..|+.++-|..|+..+
T Consensus 466 gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 466 GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDM 524 (781)
T ss_dssp EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTC
T ss_pred EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCC
Confidence 555 5689999887654332221 2469999999988666676644466676543
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.67 E-value=0.018 Score=57.40 Aligned_cols=138 Identities=14% Similarity=-0.001 Sum_probs=83.7
Q ss_pred CeEEEEeCCCCceeEEEcCCCC---------CcEEEEE---cC---CEEEEEeCCCcEEEEEeCCCceeeEeecccC---
Q 016134 255 NTIRVWELDTLEPVMTLNDHTD---------APMSLLC---WD---QFLLSCSLDHTIKVWFATGRGNLEAAYTHKE--- 316 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~~---------~v~~l~~---~~---~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~--- 316 (394)
..|..+|.++++.+-.++.... ...-+.. .+ ..++.++.+|.+.++|.++++.+-.......
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 357 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNV 357 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCccc
Confidence 3899999999998877754211 1122222 25 4677788999999999999887655432110
Q ss_pred ------Ccce---------------EE-----------EEeeECCCCCcEEEEE--------------------------
Q 016134 317 ------DNGV---------------LA-----------LGGLNDPDGKPVLICA-------------------------- 338 (394)
Q Consensus 317 ------~~~~---------------~~-----------~~~~~s~~g~~~l~sg-------------------------- 338 (394)
.... .. -..+++|+.. ++.+.
T Consensus 358 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 436 (599)
T 1w6s_A 358 FKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRE-LFFMGINHICMDWEPFMLPYKAGQFFVGATL 436 (599)
T ss_dssp EEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCC-EEEEeccccceeeecccccccCCcceecccc
Confidence 0000 00 0112345444 22221
Q ss_pred -------e------CCCeEEEEECCCCceeEEEecCCcEEEE-EECCCCEEEEEeCCCeEEEEeCCCCC
Q 016134 339 -------C------NDNTVHLYELPSFMERGRIFSKHEVRVI-EIGPDKLFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 339 -------s------~dg~I~iwd~~~~~~~~~~~~~~~v~~l-~~sp~~~l~tgs~Dg~I~vWd~~~~~ 393 (394)
+ .++.|.-||+.+++.+-+.....++..- .....++++.++.|+.|+.||..+..
T Consensus 437 ~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 437 NMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp EEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 1 3578999999999887777543332211 11234488889999999999988753
No 261
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.57 E-value=0.0078 Score=60.84 Aligned_cols=215 Identities=13% Similarity=0.113 Sum_probs=113.6
Q ss_pred eEEEEEcCCCc-eEEEEec-ccCCCeEEEEecCCCCEEEEEeCCCc---eeecCCCcEEEecCCCCcEEEEEEcCCEEEE
Q 016134 154 FLHSWFCGEGL-TMLAKLE-GHEKAVSGIALPLRSDKLFSGSRDGT---AWNIESSAEFSLDGPVGEVYSMVVANEMLFA 228 (394)
Q Consensus 154 ~i~iWd~~~~~-~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~---vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~ 228 (394)
.+.+||..++. ..+..+. .+.....++++..++++++.|+.+.. +||..+++...+....
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~--------------- 284 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ--------------- 284 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS---------------
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC---------------
Confidence 68889987652 3333332 23334445778889999999996653 6887776654432111
Q ss_pred EecCCCCCCEEEEEe-cCCeEEEEe-CC-----CeEEEEeCCCCceeEEEcC------CCCCcEEEE-EcCCEEEEEeCC
Q 016134 229 GAQDGHTRPVTCLAV-GRSRLCSGS-MD-----NTIRVWELDTLEPVMTLND------HTDAPMSLL-CWDQFLLSCSLD 294 (394)
Q Consensus 229 ~~~~~h~~~V~~l~~-~~~~l~sgs-~D-----g~V~iwd~~~~~~~~~~~~------h~~~v~~l~-~~~~~l~s~s~D 294 (394)
.....-.++.+ ++.+++.|+ .+ ..+.+||..+.+-.. +.. ....-.++. ..+..++.++.+
T Consensus 285 ----~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~ 359 (656)
T 1k3i_A 285 ----VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFGWKK 359 (656)
T ss_dssp ----SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEECGG
T ss_pred ----ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccccceeecCCceEEEECCC
Confidence 01111223344 467777777 34 579999998765322 210 000000000 113333444333
Q ss_pred ---------CcEEEEEeCCCceeeEeecccC-------CcceEEEEeeEC-CCCCcEEEEEeCCC-----------eEEE
Q 016134 295 ---------HTIKVWFATGRGNLEAAYTHKE-------DNGVLALGGLND-PDGKPVLICACNDN-----------TVHL 346 (394)
Q Consensus 295 ---------g~i~vwd~~~~~~~~~~~~~~~-------~~~~~~~~~~~s-~~g~~~l~sgs~dg-----------~I~i 346 (394)
..+..||..+............ ..... .+.+. .+++ +++.|+.++ .|.+
T Consensus 360 g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~--av~~~~~~~~-i~v~GG~~~~~~~~~~~~~~~v~~ 436 (656)
T 1k3i_A 360 GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN--AVMYDAVKGK-ILTFGGSPDYQDSDATTNAHIITL 436 (656)
T ss_dssp GCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE--EEEEETTTTE-EEEECCBSSSSSSBCCCCEEEEEC
T ss_pred CcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc--eEeccCCCCe-EEEEeCCCCCCCCCcCCcceEEEc
Confidence 4577888876654332222111 01111 11222 3555 888887543 6888
Q ss_pred EECCCCceeEEE----ecCCcEEEEEECCCC-EEEEEeCC-----------CeEEEEeCCC
Q 016134 347 YELPSFMERGRI----FSKHEVRVIEIGPDK-LFFTGDGA-----------GMLGVWKLLA 391 (394)
Q Consensus 347 wd~~~~~~~~~~----~~~~~v~~l~~sp~~-~l~tgs~D-----------g~I~vWd~~~ 391 (394)
||..+..-.... .....-.++...|++ +++.|+.+ ..+.+||..+
T Consensus 437 yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t 497 (656)
T 1k3i_A 437 GEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQ 497 (656)
T ss_dssp CSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGG
T ss_pred CCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCC
Confidence 888776543322 112222345667788 77777754 4688998754
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.54 E-value=0.0036 Score=63.31 Aligned_cols=215 Identities=10% Similarity=-0.022 Sum_probs=103.6
Q ss_pred eEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEe-CCCc-------eeecCCCcEEEecCCC-CcEEEEEEcC
Q 016134 154 FLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGT-------AWNIESSAEFSLDGPV-GEVYSMVVAN 223 (394)
Q Consensus 154 ~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~-------vWd~~~~~~~~~~~~~-~~v~~l~~~~ 223 (394)
.+++||..+.. ..+..+... ..-.++++.+++++++.|+ .++. +||..+++...+.... .+... .
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~-R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~----~ 340 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT----A 340 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC----C
T ss_pred ceEEecCcCCceeECCCCCcc-ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc----c
Confidence 79999987652 222222211 1223455667899999998 4432 6888877654432110 00000 0
Q ss_pred CEEEEEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCC---------CCcEEEEEc---CCEEEEE
Q 016134 224 EMLFAGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHT---------DAPMSLLCW---DQFLLSC 291 (394)
Q Consensus 224 ~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~---------~~v~~l~~~---~~~l~s~ 291 (394)
... ..-.+...+..+......+........+..||..+.+-......+. ..-.++.+. +++++.|
T Consensus 341 ~~~---~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~G 417 (656)
T 1k3i_A 341 DKQ---GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFG 417 (656)
T ss_dssp CTT---GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEEC
T ss_pred ccc---ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEe
Confidence 000 0000111111111111111122234568899998766443332221 123445432 6677777
Q ss_pred eCCC-----------cEEEEEeCCCceeeEe--ecccCCcceEEEEeeECCCCCcEEEEEeCC-----------CeEEEE
Q 016134 292 SLDH-----------TIKVWFATGRGNLEAA--YTHKEDNGVLALGGLNDPDGKPVLICACND-----------NTVHLY 347 (394)
Q Consensus 292 s~Dg-----------~i~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----------g~I~iw 347 (394)
+.+. .|.+||..+..-.... ..........+ +..|+++ +++.|+.+ ..+.+|
T Consensus 418 G~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~---~~l~~g~-i~v~GG~~~~~~~~~~~~~~~v~~y 493 (656)
T 1k3i_A 418 GSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTS---VVLPDGS-TFITGGQRRGIPFEDSTPVFTPEIY 493 (656)
T ss_dssp CBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEE---EECTTSC-EEEECCBSBCCTTCCCSBCCCCEEE
T ss_pred CCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCe---EECCCCC-EEEECCcccCcCcCCCCcccceEEE
Confidence 6432 5777877654433222 11111111111 2367888 88888754 568999
Q ss_pred ECCCCceeEE--Eec-CCcEEEEEECCCC-EEEEEeC
Q 016134 348 ELPSFMERGR--IFS-KHEVRVIEIGPDK-LFFTGDG 380 (394)
Q Consensus 348 d~~~~~~~~~--~~~-~~~v~~l~~sp~~-~l~tgs~ 380 (394)
|..+.+-... +.. .....+..+.|++ +++.|+.
T Consensus 494 dp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 494 VPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 9877543211 111 1223345567888 7777774
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.51 E-value=0.049 Score=49.06 Aligned_cols=215 Identities=12% Similarity=0.001 Sum_probs=113.7
Q ss_pred eeeccccccccccCCCeecCCCCCeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC-CC-ce--eecCCCc
Q 016134 130 KKTTLKNVCCHWLLGNCVRGDECRFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DG-TA--WNIESSA 205 (394)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg-~v--Wd~~~~~ 205 (394)
..++ +.+.+....+... .+.|..||....... .+. -...+..|++.++++++++... ++ .| +|..+++
T Consensus 35 egia-~~~~g~lyv~d~~----~~~I~~~d~~g~~~~--~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 35 ENLA-SAPDGTIFVTNHE----VGEIVSITPDGNQQI--HAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEE-ECTTSCEEEEETT----TTEEEEECTTCCEEE--EEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred ceEE-ECCCCCEEEEeCC----CCeEEEECCCCceEE--EEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 3444 5555554333222 347888887664322 222 2356899999999996665543 23 24 4555555
Q ss_pred EEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEE-ecCCeE-EEEeCCCeEEEEeCCCCce-eEEEc---------C
Q 016134 206 EFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLA-VGRSRL-CSGSMDNTIRVWELDTLEP-VMTLN---------D 273 (394)
Q Consensus 206 ~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~-~~~~~l-~sgs~Dg~V~iwd~~~~~~-~~~~~---------~ 273 (394)
...+... ........++ +.+..+ ++-..++.|.++|..+++. +.... .
T Consensus 107 ~~~~~~~--------------------~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 107 VETLLTL--------------------PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSES 166 (306)
T ss_dssp EEEEEEC--------------------TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTC
T ss_pred EEEEEeC--------------------CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccC
Confidence 4322110 0011122222 334443 4434578888899875431 21111 1
Q ss_pred CCCCcEEEEEcCCEEEE-EeCCCcEEEEEeCC-Cce--eeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEEC
Q 016134 274 HTDAPMSLLCWDQFLLS-CSLDHTIKVWFATG-RGN--LEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYEL 349 (394)
Q Consensus 274 h~~~v~~l~~~~~~l~s-~s~Dg~i~vwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~ 349 (394)
.......+...++.|+. -...+.|..+|+.. ++. ...+... .....++ ++++|. ++++....+.|.++|.
T Consensus 167 ~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~----vd~dG~-l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 167 VFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFA----FDVEGN-LYGATHIYNSVVRIAP 240 (306)
T ss_dssp CSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEE----EBTTCC-EEEECBTTCCEEEECT
T ss_pred CCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeE----ECCCCC-EEEEeCCCCeEEEECC
Confidence 11234556555665544 44578999999864 221 1111111 1122233 488997 7777667789999997
Q ss_pred CCCceeEE--Eec-CCcEEEEEEC---CCC-EEEEEe
Q 016134 350 PSFMERGR--IFS-KHEVRVIEIG---PDK-LFFTGD 379 (394)
Q Consensus 350 ~~~~~~~~--~~~-~~~v~~l~~s---p~~-~l~tgs 379 (394)
. ++.... +.. ....++++|. |++ .|+..+
T Consensus 241 ~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 241 D-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp T-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred C-CCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 5 544222 222 2568999998 786 444433
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.50 E-value=0.054 Score=49.08 Aligned_cols=129 Identities=16% Similarity=0.119 Sum_probs=73.8
Q ss_pred CeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEE-eCCCcEEEEEeCCCc--eeeEeecccCCcceEEEEeeECC
Q 016134 255 NTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSC-SLDHTIKVWFATGRG--NLEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~-s~Dg~i~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
+.|..||..+++...... .......++++ ++.|+.+ ...+.|.+|++.... ....+..... .. .++.++
T Consensus 165 g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~--gi~~d~ 238 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PG--NIKRNA 238 (322)
T ss_dssp EEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EE--EEEECT
T ss_pred ceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CC--CeEECC
Confidence 667778876665432222 12334567777 5655555 556899999987421 1122221111 22 234588
Q ss_pred CCCcEEEEEeC----------CCeEEEEECCCCceeEEEecC-----CcEEEEEECCCC-EEEEEeCCCeEEEEeCCCC
Q 016134 330 DGKPVLICACN----------DNTVHLYELPSFMERGRIFSK-----HEVRVIEIGPDK-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 330 ~g~~~l~sgs~----------dg~I~iwd~~~~~~~~~~~~~-----~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
+|. +.++... .+.|..+|.. ++.+..+... ..++.+++. ++ ++++....+.|..+++..+
T Consensus 239 ~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 239 DGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEEEEEEC---
T ss_pred CCC-EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-CCEEEEeecCCCceEEEecccc
Confidence 998 5555433 4678888864 6666555442 246677663 56 5556667889999998754
No 265
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.39 E-value=0.012 Score=53.48 Aligned_cols=151 Identities=10% Similarity=-0.015 Sum_probs=91.2
Q ss_pred EEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEcC--------------------CCCCcEEEEEc--CCEEEEEeC
Q 016134 238 VTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLND--------------------HTDAPMSLLCW--DQFLLSCSL 293 (394)
Q Consensus 238 V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~--------------------h~~~v~~l~~~--~~~l~s~s~ 293 (394)
..+++++ +++++++..++.|..||..+++.. .+.. ....+..+++. +..|+.+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 3455675 456888888999999998765432 2221 01246788887 456777766
Q ss_pred CCcEEEEEeCCCceeeEeecccCC-cceEEEEeeECC-CCCcEEEEEeC-----------------CCeEEEEECCCCce
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKED-NGVLALGGLNDP-DGKPVLICACN-----------------DNTVHLYELPSFME 354 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~s~-~g~~~l~sgs~-----------------dg~I~iwd~~~~~~ 354 (394)
.+.|..+|...+. +..+...... .......+..++ +|. +.++-.. ++.|..||..+++.
T Consensus 100 ~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 100 YYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 6668888865432 2222211110 001111234588 887 6665432 36788899877654
Q ss_pred eEEEecCCcEEEEEECCCC-EEEEE-eCCCeEEEEeCCC
Q 016134 355 RGRIFSKHEVRVIEIGPDK-LFFTG-DGAGMLGVWKLLA 391 (394)
Q Consensus 355 ~~~~~~~~~v~~l~~sp~~-~l~tg-s~Dg~I~vWd~~~ 391 (394)
............|+++|++ .|+.+ ...+.|.+|++..
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3333223456789999998 45444 5678999998864
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.38 E-value=0.023 Score=58.35 Aligned_cols=239 Identities=10% Similarity=-0.029 Sum_probs=120.9
Q ss_pred Cccc-ccccccccc-----cCCCCCcccccccCCC-CCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeec
Q 016134 76 PSYN-RLKNNLWVS-----SGSEDRIPHVRNRENP-GYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVR 148 (394)
Q Consensus 76 ~~~~-~~~~~~~~~-----s~s~d~~~~~w~~~~~-~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~ 148 (394)
.+|+ + ++.+|+ +|+...+++++|++++ ...... . ......+. |+|++..++-...+
T Consensus 179 ~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~----------~----~~~~~~~~-WspDg~~l~y~~~d 241 (751)
T 2xe4_A 179 VKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK----------V----SGTNGEIV-WGPDHTSLFYVTKD 241 (751)
T ss_dssp EEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC----------E----EEECSCCE-ECSSTTEEEEEEEC
T ss_pred eEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc----------c----cCceeeEE-EecCCCEEEEEEEC
Confidence 4556 5 777777 3444457999999988 521100 0 11223455 89988777655544
Q ss_pred CC-CCCeEEEEEcCCCc-eEEEEec-ccCCCeEEEEecCCCCEEEEEeCCCc-----eeecCCC--cE--EEecCCCCcE
Q 016134 149 GD-ECRFLHSWFCGEGL-TMLAKLE-GHEKAVSGIALPLRSDKLFSGSRDGT-----AWNIESS--AE--FSLDGPVGEV 216 (394)
Q Consensus 149 g~-~~~~i~iWd~~~~~-~~~~~l~-~h~~~V~~l~~s~~~~~l~sgs~Dg~-----vWd~~~~--~~--~~~~~~~~~v 216 (394)
.. ....|.++++.++. +....+. .+......+.|+||+++|+..+.++. ++|+.++ +. ..+..
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~----- 316 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP----- 316 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-----
T ss_pred CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-----
Confidence 32 12368888887653 1122322 23345678899999999887664433 4566554 12 21111
Q ss_pred EEEEEcCCEEEEEecCCCCCCEEEEEec-CCeEEEEe-CC----CeEEEEeCCCCceeEE-EcCCCC--CcEEEEEcCC-
Q 016134 217 YSMVVANEMLFAGAQDGHTRPVTCLAVG-RSRLCSGS-MD----NTIRVWELDTLEPVMT-LNDHTD--APMSLLCWDQ- 286 (394)
Q Consensus 217 ~~l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~l~sgs-~D----g~V~iwd~~~~~~~~~-~~~h~~--~v~~l~~~~~- 286 (394)
.......++.|+ ++.|+..+ .+ ..|.++|+.+...... +..+.. .+..+.+.++
T Consensus 317 ----------------~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~ 380 (751)
T 2xe4_A 317 ----------------REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNY 380 (751)
T ss_dssp ----------------CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSE
T ss_pred ----------------CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCE
Confidence 122334445533 45444333 32 3677777764222222 222333 3455666654
Q ss_pred EEEEEeCCCcEE--EEEe-------CCCceeeEeecccCCcceEEEEeeE--CCCCCcEEEEEeCC---CeEEEEECCCC
Q 016134 287 FLLSCSLDHTIK--VWFA-------TGRGNLEAAYTHKEDNGVLALGGLN--DPDGKPVLICACND---NTVHLYELPSF 352 (394)
Q Consensus 287 ~l~s~s~Dg~i~--vwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~--s~~g~~~l~sgs~d---g~I~iwd~~~~ 352 (394)
++++...++..+ ++|+ ..++....+. .........+.... ++++..++++.+.. ..+..+|+.++
T Consensus 381 lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 381 LVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVV-MEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp EEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECC-CCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred EEEEEEeCCEEEEEEEecccccccccCCccceEEC-CCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 455666677544 4554 2222023322 11112222331111 34555455554433 45777787766
Q ss_pred c
Q 016134 353 M 353 (394)
Q Consensus 353 ~ 353 (394)
+
T Consensus 460 ~ 460 (751)
T 2xe4_A 460 S 460 (751)
T ss_dssp C
T ss_pred c
Confidence 4
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.34 E-value=0.1 Score=48.79 Aligned_cols=209 Identities=13% Similarity=0.052 Sum_probs=114.2
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEe-CCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.|+..++... .....+. ....+..++|++.+..|+-.. ..+.| ++++......+...
T Consensus 97 ~I~~i~~~~~-~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~------------------ 156 (386)
T 3v65_B 97 DIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST------------------ 156 (386)
T ss_dssp CEEEECTTSC-CCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS------------------
T ss_pred cceeeccCCC-cEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC------------------
Confidence 4666776544 2222222 345678999998666665544 33444 44444332221100
Q ss_pred cCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe-CC-CcEEEEEeC
Q 016134 231 QDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS-LD-HTIKVWFAT 303 (394)
Q Consensus 231 ~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~D-g~i~vwd~~ 303 (394)
+ ......|+++ +.++++-...+.|.+.++........+.........++++ +..|+.+. .. +.|..+++.
T Consensus 157 --~-~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 157 --G-LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp --S-CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred --C-CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 0 1112233443 3445555667789988887544333334344567888887 45554444 34 678888775
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAG 382 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg 382 (394)
... ...+.. ........+ +++|++..++++-...+.|..+|+........+.. ......|++..+.++++-...+
T Consensus 234 G~~-~~~~~~-~~~~~PnGl--avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~ 309 (386)
T 3v65_B 234 GSG-RRIIAD-THLFWPNGL--TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTK 309 (386)
T ss_dssp SCS-CEEEEC-SSCSCEEEE--EEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTT
T ss_pred CCC-cEEEEE-CCCCCeeeE--EEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCC
Confidence 432 222221 111112222 35766665777777788999999875433333322 3457788884333666777778
Q ss_pred eEEEEeC
Q 016134 383 MLGVWKL 389 (394)
Q Consensus 383 ~I~vWd~ 389 (394)
.|..++.
T Consensus 310 ~V~~~~~ 316 (386)
T 3v65_B 310 SINSANK 316 (386)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 8888873
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.32 E-value=0.08 Score=48.87 Aligned_cols=151 Identities=11% Similarity=-0.021 Sum_probs=89.1
Q ss_pred CEEEEEec--CCe-EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCceeeE
Q 016134 237 PVTCLAVG--RSR-LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 237 ~V~~l~~~--~~~-l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
.+..++|+ .+. +++-...+.|..+++........+.........++++ +. +.++-...+.|.+.++.... ...
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~ 152 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKV 152 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEE
Confidence 45677776 344 4454567889999988655444333333445667765 44 44555567889999986433 222
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEEEe-cCCcEEEEEECCCC--EEEEEeCCCeEEE
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGRIF-SKHEVRVIEIGPDK--LFFTGDGAGMLGV 386 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~--~l~tgs~Dg~I~v 386 (394)
+... .......+ +++|.+..++++-... +.|..+++........+. .-...+.|+++|++ ++++-...+.|..
T Consensus 153 l~~~-~l~~P~~i--avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 153 LLWQ-SLEKPRAI--ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EECT-TCSCEEEE--EEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEeC-CCCCcceE--EEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 2211 11122222 2477655466766655 889988886533222111 23458899999865 5555556678888
Q ss_pred EeCCC
Q 016134 387 WKLLA 391 (394)
Q Consensus 387 Wd~~~ 391 (394)
++++.
T Consensus 230 ~~~dG 234 (349)
T 3v64_C 230 ANLDG 234 (349)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 88764
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.25 E-value=0.11 Score=48.70 Aligned_cols=151 Identities=11% Similarity=-0.017 Sum_probs=88.1
Q ss_pred CEEEEEec--CC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCceeeE
Q 016134 237 PVTCLAVG--RS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 237 ~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
....++|+ .+ ++++-...+.|..+++........+.........++++ +. ++++-...+.|.+.++.... ...
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~~ 195 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKV 195 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eEE
Confidence 45677776 34 44455567889999988665444333333344556665 44 44555556788888875433 222
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEE
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGV 386 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~v 386 (394)
+... .......+ ..+|.+..++++-... +.|..+++........... -...+.|+++|++ ++++=...+.|..
T Consensus 196 l~~~-~l~~P~gi--avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 196 LLWQ-SLEKPRAI--ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EECS-SCSCEEEE--EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eecC-CCCCCcEE--EEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 2211 11122222 2477666466666555 7898888875433332222 4458899999865 5555556678888
Q ss_pred EeCCC
Q 016134 387 WKLLA 391 (394)
Q Consensus 387 Wd~~~ 391 (394)
++++.
T Consensus 273 ~d~dG 277 (386)
T 3v65_B 273 ANLDG 277 (386)
T ss_dssp ECTTS
T ss_pred EeCCC
Confidence 88764
No 270
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.23 E-value=0.046 Score=48.96 Aligned_cols=141 Identities=7% Similarity=0.071 Sum_probs=72.0
Q ss_pred cCCeEEEEeCC-----CeEEEEeCCCCc--eeEEEcCCCCCcEEEEEcCCEEEEEeCC-----CcEEEEEeCCCceeeEe
Q 016134 244 GRSRLCSGSMD-----NTIRVWELDTLE--PVMTLNDHTDAPMSLLCWDQFLLSCSLD-----HTIKVWFATGRGNLEAA 311 (394)
Q Consensus 244 ~~~~l~sgs~D-----g~V~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~~~ 311 (394)
++.+++.|+.+ ..+.+||+.+.+ .+..+......-..+.+.+.+++.|+.+ ..+.+||+.+.+-...
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~- 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV- 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeC-
Confidence 44555555543 468899987754 2333322222223344446666666654 4688899876543222
Q ss_pred ecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCceeEE--EecCC-cEEEEEECCCC-EEEEEeCC-
Q 016134 312 YTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFMERGR--IFSKH-EVRVIEIGPDK-LFFTGDGA- 381 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~~~-~v~~l~~sp~~-~l~tgs~D- 381 (394)
..........+.. .-+++ +++.|+.+ ..+.+||+.+.+-... +.... ....+.+ ++ +++.|+.+
T Consensus 191 ~~~p~~r~~~~~~---~~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 191 TPMATKRSGAGVA---LLNDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp CCCSSCCBSCEEE---EETTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred CCCCcccccceEE---EECCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCC
Confidence 1111111111111 11455 77777664 4689999987643322 11111 1222222 45 66666655
Q ss_pred ----CeEEEEeCCC
Q 016134 382 ----GMLGVWKLLA 391 (394)
Q Consensus 382 ----g~I~vWd~~~ 391 (394)
..|.+||+.+
T Consensus 265 ~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 265 NSLLSSIECYDPII 278 (301)
T ss_dssp SSBEEEEEEEETTT
T ss_pred CcccccEEEEcCCC
Confidence 3577888765
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.17 E-value=0.05 Score=50.01 Aligned_cols=141 Identities=12% Similarity=0.138 Sum_probs=90.0
Q ss_pred CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc------CC---EEEEEe-C--CCcEEEEEeC-CCceeeEee
Q 016134 246 SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW------DQ---FLLSCS-L--DHTIKVWFAT-GRGNLEAAY 312 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~------~~---~l~s~s-~--Dg~i~vwd~~-~~~~~~~~~ 312 (394)
.+++.....+-+.+||+ +++.++.+.. +.+..+..- ++ ++++.. . +++|.+|++. ....+..+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 55666677889999999 7899988864 455555544 22 233333 3 5899999884 222344442
Q ss_pred cc--c--CC-cceEEEEeeECCC-CCcEEEEEeCCCeEEEEECC-------CCceeEEEecCCcEEEEEECCCC-EEEEE
Q 016134 313 TH--K--ED-NGVLALGGLNDPD-GKPVLICACNDNTVHLYELP-------SFMERGRIFSKHEVRVIEIGPDK-LFFTG 378 (394)
Q Consensus 313 ~~--~--~~-~~~~~~~~~~s~~-g~~~l~sgs~dg~I~iwd~~-------~~~~~~~~~~~~~v~~l~~sp~~-~l~tg 378 (394)
.. . .. .....++..-+|. ++.++++...++.+..|++. +.+.+.++.....+-.+...+.. .|+.+
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEe
Confidence 11 1 11 2223333223564 55467778888999999983 23556666667789999999876 99999
Q ss_pred eCCCeEEEEeC
Q 016134 379 DGAGMLGVWKL 389 (394)
Q Consensus 379 s~Dg~I~vWd~ 389 (394)
-+|.-|..++.
T Consensus 198 eEd~GIw~~da 208 (355)
T 3amr_A 198 EEDEAIWKFSA 208 (355)
T ss_dssp ETTTEEEEEEC
T ss_pred cccceEEEEeC
Confidence 99966544443
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.17 E-value=0.13 Score=46.31 Aligned_cols=199 Identities=8% Similarity=-0.050 Sum_probs=107.0
Q ss_pred eEEEEecccCCCeEEEEecCCCCEEEEEeCCCceeecCC-CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEe
Q 016134 165 TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGTAWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAV 243 (394)
Q Consensus 165 ~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~vWd~~~-~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~ 243 (394)
+.+..+... .....++|+++++++++-..++.|+.+.. +........ ......+++
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~----------------------~~~p~gia~ 79 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATV----------------------EGKVSGLAF 79 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEEC----------------------SSEEEEEEE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeC----------------------CCCceeEEE
Confidence 455555433 56788999999987777666777644332 122111111 124556666
Q ss_pred c--CCeEEEEeC-CC-eEEEEeCCCCceeEEEcC-CCCCcEEEEEc-CCEEEEEe-CCCcEEEEEeCCCc-eeeEeec--
Q 016134 244 G--RSRLCSGSM-DN-TIRVWELDTLEPVMTLND-HTDAPMSLLCW-DQFLLSCS-LDHTIKVWFATGRG-NLEAAYT-- 313 (394)
Q Consensus 244 ~--~~~l~sgs~-Dg-~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~-~~~l~s~s-~Dg~i~vwd~~~~~-~~~~~~~-- 313 (394)
+ ++++++... ++ .|..+|..+++....... .......++.. +..++... .++.|.++|...+. .+.....
T Consensus 80 ~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~ 159 (306)
T 2p4o_A 80 TSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 159 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred cCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcc
Confidence 5 444443322 22 466677777765432221 11222344433 44444444 57888888876432 1111110
Q ss_pred ----c-cCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC-Cce--eEEEecCCcEEEEEECCCC-EEEEEeCCCeE
Q 016134 314 ----H-KEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS-FME--RGRIFSKHEVRVIEIGPDK-LFFTGDGAGML 384 (394)
Q Consensus 314 ----~-~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~-~~~--~~~~~~~~~v~~l~~sp~~-~l~tgs~Dg~I 384 (394)
. ........+ +++++.++++-...+.|..|++.. +.. ...+........++++++| ++++....+.|
T Consensus 160 ~~~~~~~~~~~pngi----s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 160 ARSNSESVFPAANGL----KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp SCSSTTCCSCSEEEE----EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred ccccccCCCCcCCCc----CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 0 000112222 667775777777789999999875 321 1122212345678899999 55555567788
Q ss_pred EEEeCC
Q 016134 385 GVWKLL 390 (394)
Q Consensus 385 ~vWd~~ 390 (394)
.+++..
T Consensus 236 ~~~~~~ 241 (306)
T 2p4o_A 236 VRIAPD 241 (306)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 888753
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.14 E-value=0.15 Score=46.46 Aligned_cols=214 Identities=13% Similarity=0.033 Sum_probs=116.2
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEe-CCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.|+..++.........+......+.+|+|++.+..|+-+. ..+.| +++....... .++..
T Consensus 14 ~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~----------------~~~~~- 76 (318)
T 3sov_A 14 DLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ----------------NVVVS- 76 (318)
T ss_dssp EEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC----------------EEEEE-
T ss_pred eEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE----------------EEEcC-
Confidence 6788888654211111222234567899988655555443 33444 3333331100 00000
Q ss_pred cCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC--CCcEEEEEeC
Q 016134 231 QDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL--DHTIKVWFAT 303 (394)
Q Consensus 231 ~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--Dg~i~vwd~~ 303 (394)
+ ......++++ ++++++-...+.|.++++........+.........++++ +..|+.+.. .+.|...++.
T Consensus 77 --~-l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 77 --G-LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp --C-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred --C-CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 0 1122344443 3455555667899999987543333333444567888887 455555542 5678888775
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe-cCCcEEEEEECCCCEEEEEeCCC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-SKHEVRVIEIGPDKLFFTGDGAG 382 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~~l~tgs~Dg 382 (394)
. .....+... .-.... .+++++++..++++-...+.|..+|+........+. .......+++..++++++-...+
T Consensus 154 G-~~~~~~~~~-~l~~Pn--glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~ 229 (318)
T 3sov_A 154 G-SSRFIIINS-EIYWPN--GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTH 229 (318)
T ss_dssp S-CSCEEEECS-SCSCEE--EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTT
T ss_pred C-CCeEEEEEC-CCCCcc--EEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCC
Confidence 3 222222211 111122 223577666577777778999999987543322222 23456778886554677766778
Q ss_pred eEEEEeCCC
Q 016134 383 MLGVWKLLA 391 (394)
Q Consensus 383 ~I~vWd~~~ 391 (394)
.|..++..+
T Consensus 230 ~V~~~~~~~ 238 (318)
T 3sov_A 230 SILACNKYT 238 (318)
T ss_dssp EEEEEETTT
T ss_pred eEEEEECCC
Confidence 888888744
No 274
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.02 E-value=0.088 Score=47.11 Aligned_cols=213 Identities=11% Similarity=0.089 Sum_probs=100.3
Q ss_pred CeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-------eeecCCCcEEEecCCCCcEEEEEEcCC
Q 016134 153 RFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-------AWNIESSAEFSLDGPVGEVYSMVVANE 224 (394)
Q Consensus 153 ~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-------vWd~~~~~~~~~~~~~~~v~~l~~~~~ 224 (394)
..+.++|+.+.. ..+..+......-..+.+ ++..++.|+.++. ++|..+.+-..+.....
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~---------- 97 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD---------- 97 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS----------
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc----------
Confidence 467888887652 122112111111112222 5667777776543 46666665544322110
Q ss_pred EEEEEecCCCCCCEEEEEecCCeEEEEeCCC-----eEEEEeCCCCceeE--EEcCCCCCcEEEEEcCCEEEEEeCC---
Q 016134 225 MLFAGAQDGHTRPVTCLAVGRSRLCSGSMDN-----TIRVWELDTLEPVM--TLNDHTDAPMSLLCWDQFLLSCSLD--- 294 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l~~~~~~l~sgs~Dg-----~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~D--- 294 (394)
.......+.+++.+++.|+.++ .+.+||+.+.+-.. .+.........+.+.+.+++.|+.+
T Consensus 98 ---------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 98 ---------RRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS 168 (302)
T ss_dssp ---------CCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT
T ss_pred ---------cccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC
Confidence 0011112233455566666443 57889987754222 1221112223333446666666542
Q ss_pred ----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCceeEE--EecCCc
Q 016134 295 ----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFMERGR--IFSKHE 363 (394)
Q Consensus 295 ----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~~~~ 363 (394)
..+.+||+.+.+-... ..........+.. .-+++ +++.|+.+ ..+.+||+.+.+-... +.....
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~---~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYI-AEMSTRRSGAGVG---VLNNL-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp TEECCCEEEEETTTTEEEEE-CCCSSCCBSCEEE---EETTE-EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred CccccEEEEEeCCCCcEEEC-CCCccccccccEE---EECCE-EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc
Confidence 3588899876532222 1111111111111 11455 77777654 4689999987643221 111111
Q ss_pred EEEEEECCCC-EEEEEeCCC-----eEEEEeCCCC
Q 016134 364 VRVIEIGPDK-LFFTGDGAG-----MLGVWKLLAK 392 (394)
Q Consensus 364 v~~l~~sp~~-~l~tgs~Dg-----~I~vWd~~~~ 392 (394)
-.+++.. ++ +++.|+.++ .|.+||+.+.
T Consensus 244 ~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 244 NAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred cCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCC
Confidence 1122222 45 666666553 4888887653
No 275
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.92 E-value=0.25 Score=45.49 Aligned_cols=209 Identities=12% Similarity=0.014 Sum_probs=113.6
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEe-CCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.|+..++... .....+. ....+..++|++....|+-+. ..+.| ++++......+..
T Consensus 54 ~I~~i~~~g~-~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~------------------- 112 (349)
T 3v64_C 54 DIRQVLPHRS-EYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS------------------- 112 (349)
T ss_dssp CEEEECTTSC-CEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------------
T ss_pred ceEEEeCCCC-eeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-------------------
Confidence 4566666543 3333333 334578999998766666554 33444 4444333221100
Q ss_pred cCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe-CC-CcEEEEEeC
Q 016134 231 QDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS-LD-HTIKVWFAT 303 (394)
Q Consensus 231 ~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~D-g~i~vwd~~ 303 (394)
........++++ +.++++-...+.|.+.++........+.........++++ +..|+... .. +.|..+++.
T Consensus 113 --~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 113 --TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp --SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred --CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 001122344443 3445555667899999987544333333344567888887 44444443 44 678888875
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCCEEEEEeCCC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDKLFFTGDGAG 382 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~~l~tgs~Dg 382 (394)
.. ....+.. ........ ++++|++..++++-...+.|..+|+........+.. ......|++..+.++++-...+
T Consensus 191 G~-~~~~~~~-~~~~~PnG--la~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~ 266 (349)
T 3v64_C 191 GS-GRRIIAD-THLFWPNG--LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTK 266 (349)
T ss_dssp SC-SCEESCC-SSCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTT
T ss_pred CC-CcEEEEE-CCCCCcce--EEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEECCEEEEecCCCC
Confidence 32 2222221 11112222 235776665777777788999999875433322322 3456788884333666666777
Q ss_pred eEEEEeC
Q 016134 383 MLGVWKL 389 (394)
Q Consensus 383 ~I~vWd~ 389 (394)
.|..++.
T Consensus 267 ~V~~~~~ 273 (349)
T 3v64_C 267 SINSANK 273 (349)
T ss_dssp EEEEEET
T ss_pred eEEEEEc
Confidence 8877763
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.81 E-value=0.28 Score=44.40 Aligned_cols=151 Identities=14% Similarity=0.070 Sum_probs=85.5
Q ss_pred CCEEEEEec--CCe-EEEEeCCCeEEEEeCCC----CceeEEEcCCCCCcEEEEEc--CCEE-EEEeCCCcEEEEEeCCC
Q 016134 236 RPVTCLAVG--RSR-LCSGSMDNTIRVWELDT----LEPVMTLNDHTDAPMSLLCW--DQFL-LSCSLDHTIKVWFATGR 305 (394)
Q Consensus 236 ~~V~~l~~~--~~~-l~sgs~Dg~V~iwd~~~----~~~~~~~~~h~~~v~~l~~~--~~~l-~s~s~Dg~i~vwd~~~~ 305 (394)
.....++|+ ++. +++-..++.|..+|+.. ......+......+..++++ +..| ++-...+.|.+.|+...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 345667776 334 44545578999999875 22222233233455677775 4444 45556789999998643
Q ss_pred ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEEEec--CCcEEEEEECCCC--EEEEEeC
Q 016134 306 GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK--LFFTGDG 380 (394)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~--~l~tgs~ 380 (394)
. ...+.... ......+ ..+|.+..++++.... +.|..+++... ....+.. -.....|++++++ ++++-..
T Consensus 110 ~-~~~~~~~~-~~~P~~i--avdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 110 K-RKTLFREN-GSKPRAI--VVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp S-EEEEEECT-TCCEEEE--EEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred c-eEEEEECC-CCCcceE--EeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 3 22222211 1122222 3477665466655443 78888887643 3333322 4468899999876 4455556
Q ss_pred CCeEEEEeCCC
Q 016134 381 AGMLGVWKLLA 391 (394)
Q Consensus 381 Dg~I~vWd~~~ 391 (394)
.+.|..++++.
T Consensus 185 ~~~I~~~d~dg 195 (316)
T 1ijq_A 185 LHSISSIDVNG 195 (316)
T ss_dssp TTEEEEEETTS
T ss_pred CCeEEEEecCC
Confidence 67899988764
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.12 Score=49.13 Aligned_cols=146 Identities=8% Similarity=0.003 Sum_probs=87.7
Q ss_pred CEEEEEecC---CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC-CC----cEEEEEeCCCc
Q 016134 237 PVTCLAVGR---SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL-DH----TIKVWFATGRG 306 (394)
Q Consensus 237 ~V~~l~~~~---~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-Dg----~i~vwd~~~~~ 306 (394)
....|++++ +.|+.+...+.|+.+|+.+++... +.........++++ +++|+.+.. ++ .+.+++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 345566662 456666555889999998765443 33345567889988 675655554 22 2333443 222
Q ss_pred ee--eEeecccCCcceEEEEeeECC-CCCcEEEEEeCCCeEEEEECCCCceeEEEec--CCcEEEEEECCCC--EEEEEe
Q 016134 307 NL--EAAYTHKEDNGVLALGGLNDP-DGKPVLICACNDNTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK--LFFTGD 379 (394)
Q Consensus 307 ~~--~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~--~l~tgs 379 (394)
.. ..+..... ...++ ++| ++. ++++-..++.|..++............ ......|+|+|++ ++++-.
T Consensus 216 ~~~~~~l~~~~~-p~gia----vdp~~g~-lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 216 FKVITELTKGQN-CNGAE----THPINGE-LYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp SCSEEEEEECSS-CCCEE----ECTTTCC-EEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeeeeeeccCCC-ceEEE----EeCCCCE-EEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 21 22222222 22233 488 566 777777788999999987654222222 3457899999999 444455
Q ss_pred CCCeEEEEeCC
Q 016134 380 GAGMLGVWKLL 390 (394)
Q Consensus 380 ~Dg~I~vWd~~ 390 (394)
..+.|..++.+
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 67789888765
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.75 E-value=0.16 Score=46.25 Aligned_cols=151 Identities=8% Similarity=0.052 Sum_probs=92.6
Q ss_pred EEEEec--CCeEEEEe-CCCeEEEEeCCCCceeEE-EcCC----CC--CcEEEEE---c--CCEEEEEe-----------
Q 016134 239 TCLAVG--RSRLCSGS-MDNTIRVWELDTLEPVMT-LNDH----TD--APMSLLC---W--DQFLLSCS----------- 292 (394)
Q Consensus 239 ~~l~~~--~~~l~sgs-~Dg~V~iwd~~~~~~~~~-~~~h----~~--~v~~l~~---~--~~~l~s~s----------- 292 (394)
.++.|+ ...|+.++ ..++|..||...+..... +..- .. .+..|.+ + +.++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 456786 35666666 689999999975543322 2221 11 2478888 4 34554333
Q ss_pred --CCCcEEEEEeC---CCceeeEeecc--cCC-------cceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEE
Q 016134 293 --LDHTIKVWFAT---GRGNLEAAYTH--KED-------NGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGR 357 (394)
Q Consensus 293 --~Dg~i~vwd~~---~~~~~~~~~~~--~~~-------~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~ 357 (394)
.+..|..+|+. +++.+....-. ... ....+..+..+++|+ ..++++.- +.|...+.... .+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~-~~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGK-TVST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSC-CEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCC-EEee
Confidence 16789999998 66555443311 110 112233445689999 77778777 77777766543 2222
Q ss_pred Ee-c------CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 358 IF-S------KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 358 ~~-~------~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
+. . ....+.|+++|++ +|+....++.|..+|+..
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 22 1 1236799999999 666666699999999763
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.69 E-value=0.44 Score=45.20 Aligned_cols=214 Identities=6% Similarity=-0.046 Sum_probs=114.5
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCC-Cc-----eeecCCCcEEEecCCCCcEEEEEEcCCEE
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD-GT-----AWNIESSAEFSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-g~-----vWd~~~~~~~~~~~~~~~v~~l~~~~~~l 226 (394)
..|+.+|+.++ . +..+.........|+|++++++|+.+... +. +|....+... ....+.
T Consensus 159 ~~I~~id~~~~-~-v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~-------~~~~l~------ 223 (430)
T 3tc9_A 159 HPTRLIDFEKE-Y-VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK-------VITELT------ 223 (430)
T ss_dssp EEEEEEETTTT-E-EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC-------SEEEEE------
T ss_pred CcEEEEECCCC-E-EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee-------eeeeec------
Confidence 47888998765 3 33333455678899999999966666543 21 2222222110 000000
Q ss_pred EEEecCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCcEEEEEc--CCEE-EEEeCCCcEEE
Q 016134 227 FAGAQDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLND-HTDAPMSLLCW--DQFL-LSCSLDHTIKV 299 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~--~~~l-~s~s~Dg~i~v 299 (394)
. ......++++ +.++++-..++.|..+|..++.....+.. .......++++ +++| ++-...+.|..
T Consensus 224 ---~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 224 ---K----GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp ---E----CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ---c----CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 0 1122344554 34455555678999999986654222221 22456788888 6744 44456788999
Q ss_pred EEeCCC-ce---eeEeeccc---C---------C-cceE-EEEeeE------CCCCCcEEEEEeCCCeEEEEECCCCcee
Q 016134 300 WFATGR-GN---LEAAYTHK---E---------D-NGVL-ALGGLN------DPDGKPVLICACNDNTVHLYELPSFMER 355 (394)
Q Consensus 300 wd~~~~-~~---~~~~~~~~---~---------~-~~~~-~~~~~~------s~~g~~~l~sgs~dg~I~iwd~~~~~~~ 355 (394)
++.... .. +..+.... . . .... .+...- ++++. ++++-...+.|+.++ .++...
T Consensus 297 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~-~~G~v~ 374 (430)
T 3tc9_A 297 SDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILT-PQGRVT 374 (430)
T ss_dssp EEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEEC-TTSEEE
T ss_pred EeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEEC-CCCcEE
Confidence 887532 11 11121110 0 0 0011 111000 23455 667666778899988 445333
Q ss_pred EEEec---------C---------CcEEEEEECC-CC-EEEEEeCCCeEEEEeCC
Q 016134 356 GRIFS---------K---------HEVRVIEIGP-DK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 356 ~~~~~---------~---------~~v~~l~~sp-~~-~l~tgs~Dg~I~vWd~~ 390 (394)
..... . .....|+++| ++ ++++-.....|+.++++
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 22211 0 1488999999 46 55555567788888764
No 280
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.69 E-value=0.15 Score=45.52 Aligned_cols=189 Identities=11% Similarity=0.073 Sum_probs=92.9
Q ss_pred ccccCCCeecCCCCCeEEEEEcCCC----ceEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-------eeecCCCcEE
Q 016134 139 CHWLLGNCVRGDECRFLHSWFCGEG----LTMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-------AWNIESSAEF 207 (394)
Q Consensus 139 ~~~~~~~~~~g~~~~~i~iWd~~~~----~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-------vWd~~~~~~~ 207 (394)
..|+.++.........+.++|..+. ++.+..+......-..+.+ +++.++.|+.++. ++|..+.+-.
T Consensus 64 ~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 64 RIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred EEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 3445555443334457889998765 3333333222222222222 5677777776543 4666665543
Q ss_pred EecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCC-----CeEEEEeCCCCceeEE--EcCCCCCcEE
Q 016134 208 SLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD-----NTIRVWELDTLEPVMT--LNDHTDAPMS 280 (394)
Q Consensus 208 ~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D-----g~V~iwd~~~~~~~~~--~~~h~~~v~~ 280 (394)
.+.... .....-.++.+++.+++.|+.+ ..+.+||+.+.+-... +.........
T Consensus 142 ~~~~~p-------------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 202 (301)
T 2vpj_A 142 MLGDMQ-------------------TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGV 202 (301)
T ss_dssp EEEECS-------------------SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred ECCCCC-------------------CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceE
Confidence 321110 0001112223345556666544 4688999887542221 1111122233
Q ss_pred EEEcCCEEEEEeCC-----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECC
Q 016134 281 LLCWDQFLLSCSLD-----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELP 350 (394)
Q Consensus 281 l~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~ 350 (394)
+.+.+.+++.|+.+ ..+.+||+.+.+-.. +............. .-+++ +++.|+.+ ..|.+||+.
T Consensus 203 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~---~~~~~-i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 203 ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT-VTSMTTPRCYVGAT---VLRGR-LYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEE---EETTE-EEEECCBCSSSBEEEEEEEETT
T ss_pred EEECCEEEEEeCCCCCcccceEEEEeCCCCcEEE-CCCCCCcccceeEE---EECCE-EEEEcCcCCCcccccEEEEcCC
Confidence 44446666777653 468899987654322 22111111111111 12555 77777655 468889988
Q ss_pred CCc
Q 016134 351 SFM 353 (394)
Q Consensus 351 ~~~ 353 (394)
+.+
T Consensus 278 ~~~ 280 (301)
T 2vpj_A 278 IDS 280 (301)
T ss_dssp TTE
T ss_pred CCe
Confidence 754
No 281
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.68 E-value=0.29 Score=42.92 Aligned_cols=195 Identities=11% Similarity=0.104 Sum_probs=111.3
Q ss_pred EEecccCCCeEEEEecCCCCEEEEE-eCCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec
Q 016134 168 AKLEGHEKAVSGIALPLRSDKLFSG-SRDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG 244 (394)
Q Consensus 168 ~~l~~h~~~V~~l~~s~~~~~l~sg-s~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~ 244 (394)
+.+.+-.+.+..|+|+|+++.|++. ..++.| .|.+ ++.+... .+ .+ ......|++.
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i---------~l----------~g-~~D~EGIa~~ 78 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI---------PL----------DF-VKDLETIEYI 78 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE---------EC----------SS-CSSEEEEEEC
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE---------ec----------CC-CCChHHeEEe
Confidence 4566777789999999987777764 445555 4444 4433211 00 01 1234455554
Q ss_pred -CCeE-EEEeCCCeEEEEeCCCCce---eEEEc------CCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCC---Ccee
Q 016134 245 -RSRL-CSGSMDNTIRVWELDTLEP---VMTLN------DHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATG---RGNL 308 (394)
Q Consensus 245 -~~~l-~sgs~Dg~V~iwd~~~~~~---~~~~~------~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~---~~~~ 308 (394)
++.+ ++.-.++.+.++++..... +.... ........|+++ ++.|+++.+.....+|.+.. ...+
T Consensus 79 ~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l 158 (255)
T 3qqz_A 79 GDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNEL 158 (255)
T ss_dssp STTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCC
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCce
Confidence 2333 3333556777777654331 22221 123456899998 55677777655556666541 1112
Q ss_pred eEeec-------ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecC----------CcEEEEEECC
Q 016134 309 EAAYT-------HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSK----------HEVRVIEIGP 371 (394)
Q Consensus 309 ~~~~~-------~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~----------~~v~~l~~sp 371 (394)
..... .......+ .++|....+++.......|.++|.. ++.+..+... ...-.|+|.+
T Consensus 159 ~i~~~~~~~~~~~~~d~S~l----~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 159 HISKDKALQRQFTLDDVSGA----EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp EEEECHHHHHTCCSSCCCEE----EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred eeecchhhccccccCCceeE----EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence 22111 01112223 3477766688888888999999977 4455554432 2578999999
Q ss_pred CCEEEEEeCCCeEEEEe
Q 016134 372 DKLFFTGDGAGMLGVWK 388 (394)
Q Consensus 372 ~~~l~tgs~Dg~I~vWd 388 (394)
+|.|+..++-+.+..+.
T Consensus 234 ~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 234 SGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp TCCEEEEETTTEEEEEE
T ss_pred CCCEEEEcCCceEEEEE
Confidence 99555557777666664
No 282
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.68 E-value=0.07 Score=53.04 Aligned_cols=139 Identities=9% Similarity=-0.096 Sum_probs=86.5
Q ss_pred CeEEEEeCCCCceeEEEcC--CC-------CCcEEEEE---cC---CEEEEEeCCCcEEEEEeCCCceeeEeecccCC--
Q 016134 255 NTIRVWELDTLEPVMTLND--HT-------DAPMSLLC---WD---QFLLSCSLDHTIKVWFATGRGNLEAAYTHKED-- 317 (394)
Q Consensus 255 g~V~iwd~~~~~~~~~~~~--h~-------~~v~~l~~---~~---~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~-- 317 (394)
+.|.-+|.++++.+-.++. |. ....-+.. .+ ..++.++.+|.+.++|.++++.+-........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 6899999999999887753 32 11122222 24 37888999999999999988876554332100
Q ss_pred ----------------------------cceEEE-----------EeeECCCCCcEEEEEe-------------------
Q 016134 318 ----------------------------NGVLAL-----------GGLNDPDGKPVLICAC------------------- 339 (394)
Q Consensus 318 ----------------------------~~~~~~-----------~~~~s~~g~~~l~sgs------------------- 339 (394)
...... ..+++|+...+++...
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 000000 1134555542333221
Q ss_pred -------------CCCeEEEEECCCCceeEEEecCCcEEEEE-ECCCCEEEEEeCCCeEEEEeCCCCC
Q 016134 340 -------------NDNTVHLYELPSFMERGRIFSKHEVRVIE-IGPDKLFFTGDGAGMLGVWKLLAKP 393 (394)
Q Consensus 340 -------------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~-~sp~~~l~tgs~Dg~I~vWd~~~~~ 393 (394)
.++.|..||+.+++.+-+......+..-. ...+++++.++.|+.|+.||..+..
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 36889999999998887766533332211 1234588889999999999987753
No 283
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.67 E-value=0.28 Score=44.06 Aligned_cols=176 Identities=9% Similarity=0.009 Sum_probs=86.6
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC----CCc---------eeecCCCcEEEecCCCCcEEEEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR----DGT---------AWNIESSAEFSLDGPVGEVYSMV 220 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~----Dg~---------vWd~~~~~~~~~~~~~~~v~~l~ 220 (394)
.+.+||..++......+..........+...+++.++.|+. ++. ++|..+.+-..+.....+-.
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~--- 90 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC--- 90 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE---
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh---
Confidence 68889988774333333322223333333457788888874 111 46666665443321111000
Q ss_pred EcCCEEEEEecCCCCCCEEEEEecCCeEEEEeCC--------CeEEEEeCCCCce--eEEEcCCCCCcEEEEEcCCEEEE
Q 016134 221 VANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSMD--------NTIRVWELDTLEP--VMTLNDHTDAPMSLLCWDQFLLS 290 (394)
Q Consensus 221 ~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D--------g~V~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~l~s 290 (394)
.| ..+.+.+.+++.|+.+ ..+.+||+.+.+- +..+......-..+.+.+.+++.
T Consensus 91 ------------~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 154 (315)
T 4asc_A 91 ------------LF----GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVI 154 (315)
T ss_dssp ------------SC----EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEE
T ss_pred ------------ce----eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEE
Confidence 11 1122334555555532 4688999987542 21222112222333444666677
Q ss_pred EeC-C-----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC-----eEEEEECCCCc
Q 016134 291 CSL-D-----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN-----TVHLYELPSFM 353 (394)
Q Consensus 291 ~s~-D-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg-----~I~iwd~~~~~ 353 (394)
|+. + ..+.+||+.+.+-.. +..........+.. .-+++ +++.|+.++ .+.+||+.+.+
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~---~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKFEWKE-LAPMQTARSLFGAT---VHDGR-IIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTTEEEE-CCCCSSCCBSCEEE---EETTE-EEEEEEECSSSEEEEEEEEETTTTE
T ss_pred eCCCCCCcccceEEEEeCCCCeEEE-CCCCCCchhceEEE---EECCE-EEEEeccCCCCccceEEEEECCCCe
Confidence 765 2 468889987653221 11111111111111 11555 777776544 58899998764
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.66 E-value=0.29 Score=45.95 Aligned_cols=152 Identities=13% Similarity=0.008 Sum_probs=86.2
Q ss_pred CCEEEEEec--CCe-EEEEeCCCeEEEEeCCCC----ceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCC
Q 016134 236 RPVTCLAVG--RSR-LCSGSMDNTIRVWELDTL----EPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGR 305 (394)
Q Consensus 236 ~~V~~l~~~--~~~-l~sgs~Dg~V~iwd~~~~----~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~ 305 (394)
..+..|+|+ .+. +++-...+.|+.+++... .....+......+..++++ +. +.++-...+.|.+.++...
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 456677776 344 444445688888888652 2233333344556777776 44 4455556788988888644
Q ss_pred ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeC-CCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EE-EEEeCC
Q 016134 306 GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACN-DNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LF-FTGDGA 381 (394)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l-~tgs~D 381 (394)
.....+.... .....+ +.+|.+..++++-.. .+.|...++........+.. -...+.|++++++ .| ++=...
T Consensus 192 ~~~~l~~~~~--~~P~~i--avdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 192 KRKTLFRENG--SKPRAI--VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp SEEEEEECSS--CCEEEE--EEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEeCCC--CCcceE--EEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 3322222111 112222 247765535555433 47888888875433333332 3568999999876 44 444456
Q ss_pred CeEEEEeCCC
Q 016134 382 GMLGVWKLLA 391 (394)
Q Consensus 382 g~I~vWd~~~ 391 (394)
..|..++++.
T Consensus 268 ~~I~~~d~dG 277 (400)
T 3p5b_L 268 HSISSIDVNG 277 (400)
T ss_dssp TEEEEEETTS
T ss_pred CEEEEEeCCC
Confidence 7888888764
No 285
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.61 E-value=0.13 Score=46.24 Aligned_cols=144 Identities=8% Similarity=0.034 Sum_probs=71.0
Q ss_pred ecCCeEEEEeCC-----CeEEEEeCCCCceeE--EEcCCCCCcEEEEEcCCEEEEEeCC-----CcEEEEEeCCCceeeE
Q 016134 243 VGRSRLCSGSMD-----NTIRVWELDTLEPVM--TLNDHTDAPMSLLCWDQFLLSCSLD-----HTIKVWFATGRGNLEA 310 (394)
Q Consensus 243 ~~~~~l~sgs~D-----g~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~~ 310 (394)
+++.+++.|+.+ ..+.+||+.+.+-.. .+......-..+.+.+.+++.|+.+ ..+.+||+.+.+-..
T Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~- 198 (308)
T 1zgk_A 120 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRM- 198 (308)
T ss_dssp ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEE-
T ss_pred ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEee-
Confidence 345555555533 468899988754221 1221112223333446666666654 458889987653221
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCceeEE--EecCCcEEEEEECCCC-EEEEEeCC-
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFMERGR--IFSKHEVRVIEIGPDK-LFFTGDGA- 381 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~~~~~--~~~~~~v~~l~~sp~~-~l~tgs~D- 381 (394)
+..........+.. .+ +++ +++.|+.+ ..+.+||+.+.+-... +.....-.++... ++ +++.|+.+
T Consensus 199 ~~~~p~~r~~~~~~-~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~ 273 (308)
T 1zgk_A 199 ITAMNTIRSGAGVC-VL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDG 273 (308)
T ss_dssp CCCCSSCCBSCEEE-EE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCS
T ss_pred CCCCCCccccceEE-EE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCC
Confidence 11111111111111 12 455 77777654 5699999987643221 1111111122222 44 66666643
Q ss_pred ----CeEEEEeCCCC
Q 016134 382 ----GMLGVWKLLAK 392 (394)
Q Consensus 382 ----g~I~vWd~~~~ 392 (394)
..|.+||+.+.
T Consensus 274 ~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 274 HTFLDSVECYDPDTD 288 (308)
T ss_dssp SCBCCEEEEEETTTT
T ss_pred CcccceEEEEcCCCC
Confidence 35778887653
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.59 E-value=0.41 Score=43.47 Aligned_cols=187 Identities=11% Similarity=0.011 Sum_probs=97.7
Q ss_pred cCCCeEEEEecCCCCEEEEEeCCCceeecCC-CcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec--CCeEE
Q 016134 173 HEKAVSGIALPLRSDKLFSGSRDGTAWNIES-SAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG--RSRLC 249 (394)
Q Consensus 173 h~~~V~~l~~s~~~~~l~sgs~Dg~vWd~~~-~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~--~~~l~ 249 (394)
+.+.+..|.+.+++..++.+ .++.||.... ++...... ..+...+..+.+. +.+++
T Consensus 120 ~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~--------------------~~~~~~~~~~~~~~~~~~~~ 178 (327)
T 2xbg_A 120 LPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALV--------------------QEAIGVMRNLNRSPSGEYVA 178 (327)
T ss_dssp CSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEE--------------------CSCCCCEEEEEECTTSCEEE
T ss_pred CCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEee--------------------cCCCcceEEEEEcCCCcEEE
Confidence 44567888887766655554 4666654433 43321100 0223455666665 33444
Q ss_pred EEeCCCeEE-EEeC--CCCceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeecc--cCCcceEEE
Q 016134 250 SGSMDNTIR-VWEL--DTLEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYTH--KEDNGVLAL 323 (394)
Q Consensus 250 sgs~Dg~V~-iwd~--~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~--~~~~~~~~~ 323 (394)
.+ .++.+. -.|- .+.+.+. ......+..+.+. ...++.++.+|.+++.+...++....+... ........+
T Consensus 179 ~g-~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v 255 (327)
T 2xbg_A 179 VS-SRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDL 255 (327)
T ss_dssp EE-TTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEE
T ss_pred EE-CCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEE
Confidence 44 444443 3442 3333332 2344567888876 334556667888777642212222222111 011122333
Q ss_pred EeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec----CCcEEEEEECCCCEEEEEeCCCeEEEEe
Q 016134 324 GGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS----KHEVRVIEIGPDKLFFTGDGAGMLGVWK 388 (394)
Q Consensus 324 ~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~~~v~~l~~sp~~~l~tgs~Dg~I~vWd 388 (394)
.+.+++. +++++ .++.| ++....++.-..+.. ...+..+.|.+++.++.++.+|.|.-++
T Consensus 256 --~~~~~~~-~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 256 --AYRTPNE-VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp --EESSSSC-EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred --EecCCCE-EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 3567776 66655 46766 344554544444332 3457888887666777888899877665
No 287
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.58 E-value=0.5 Score=44.35 Aligned_cols=214 Identities=10% Similarity=0.032 Sum_probs=117.5
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC-CCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.|+..++... ... .+......+..|+|++.+..|+-+.. .+.| +++...... ..... ++
T Consensus 93 ~I~~i~l~~~-~~~-~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~~~~~-------~~--- 154 (400)
T 3p5b_L 93 EVRKMTLDRS-EYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDT-------VI--- 154 (400)
T ss_dssp EEEEECTTSC-SCE-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCEE-------EE---
T ss_pred eeEEEccCCc-cee-EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------CcceE-------EE---
Confidence 6777777654 222 22334567889999987666665543 3444 333321100 00000 00
Q ss_pred cCCCCCCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC--CCcEEEEEeC
Q 016134 231 QDGHTRPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL--DHTIKVWFAT 303 (394)
Q Consensus 231 ~~~h~~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--Dg~i~vwd~~ 303 (394)
.........|+++ ++++++-...+.|.+.|++.......+.........|+++ +.+|+.... .+.|...++.
T Consensus 155 -~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 155 -SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp -CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred -eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 0112344555654 4455555667899999988655444444344567888887 455555442 3678888875
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCCEEEEEeC
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDKLFFTGDG 380 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~~l~tgs~ 380 (394)
... ...+... .-.....+ ++++++..++++-...+.|..+|+........+.. .....+|++..+.++++-..
T Consensus 234 G~~-~~~~~~~-~l~~P~gl--avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~ 309 (400)
T 3p5b_L 234 GVD-IYSLVTE-NIQWPNGI--TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII 309 (400)
T ss_dssp SCS-CEEEECS-SCSCEEEE--EEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS
T ss_pred CCc-cEEEEEC-CCCceEEE--EEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC
Confidence 432 2222211 11122222 34776665777767788999999875433333322 23466788754446667777
Q ss_pred CCeEEEEeCC
Q 016134 381 AGMLGVWKLL 390 (394)
Q Consensus 381 Dg~I~vWd~~ 390 (394)
.+.|..++..
T Consensus 310 ~~~V~~~~~~ 319 (400)
T 3p5b_L 310 NEAIFSANRL 319 (400)
T ss_dssp SCSEEEEESS
T ss_pred CCeEEEEEcC
Confidence 7888888743
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.54 E-value=0.63 Score=47.88 Aligned_cols=153 Identities=12% Similarity=0.018 Sum_probs=86.8
Q ss_pred CCCEEEEEec--CC-eEEEEeCCCeEEEEeCCCC----ceeEEEcCCCCCcEEEEEc--C-CEEEEEeCCCcEEEEEeCC
Q 016134 235 TRPVTCLAVG--RS-RLCSGSMDNTIRVWELDTL----EPVMTLNDHTDAPMSLLCW--D-QFLLSCSLDHTIKVWFATG 304 (394)
Q Consensus 235 ~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~----~~~~~~~~h~~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~ 304 (394)
...+..|+|+ .+ ++++-...+.|+.+++... .....+......+..|+++ + .++++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3456677775 33 4455555678888888752 2233333344556677776 5 4555555678999999864
Q ss_pred CceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EE-EEEeC
Q 016134 305 RGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LF-FTGDG 380 (394)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l-~tgs~ 380 (394)
.. ...+.... ......+ +++|.+..++++-..+ +.|...++........+.. -...+.|++++.+ .| ++=..
T Consensus 503 ~~-~~~l~~~~-l~~P~gI--aVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 503 VK-RKTLFREN-GSKPRAI--VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp SS-EEEEEECT-TCCEEEE--EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred Ce-EEEEEeCC-CCCcceE--EEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 33 33332211 1122222 2467655366654333 7899998875444333332 3578999999765 44 44445
Q ss_pred CCeEEEEeCCC
Q 016134 381 AGMLGVWKLLA 391 (394)
Q Consensus 381 Dg~I~vWd~~~ 391 (394)
...|...++.-
T Consensus 579 ~~~I~~~d~dG 589 (791)
T 3m0c_C 579 LHSISSIDVNG 589 (791)
T ss_dssp TTEEEEEETTS
T ss_pred CCcEEEEecCC
Confidence 56788887754
No 289
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.42 E-value=1 Score=48.50 Aligned_cols=140 Identities=17% Similarity=0.125 Sum_probs=87.1
Q ss_pred CeEEEEe----------CCCeEEEEeCCCCce--eEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeec
Q 016134 246 SRLCSGS----------MDNTIRVWELDTLEP--VMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYT 313 (394)
Q Consensus 246 ~~l~sgs----------~Dg~V~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~ 313 (394)
.+|++|. ..|.|.+|++..++. +... ...++|++++-.+.+|+++- ..+|++|++...+.+.....
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~-~v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~L~~~~~ 922 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEK-EVKGAVYSMVEFNGKLLASI-NSTVRLYEWTTEKELRTECN 922 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEE-EESSCEEEEEEETTEEEEEE-TTEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEE-EcCCcCEEEeeeCCEEEEEc-CCEEEEEECCCCceEEEEee
Confidence 5777776 357899999864432 2222 24688999987755555554 47899999987654441111
Q ss_pred ccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC--CCceeEEEec--CCcEEEEEECCCCEEEEEeCCCeEEEEeC
Q 016134 314 HKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP--SFMERGRIFS--KHEVRVIEIGPDKLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 314 ~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~--~~~~~~~~~~--~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~ 389 (394)
.........+. ..+. +++.|..-..|.++..+ ..+....-.. ...++++.+-.++.++.+..+|.|.+...
T Consensus 923 ~~~~i~~~~l~----~~~~-~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 923 HYNNIMALYLK----TKGD-FILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQK 997 (1158)
T ss_dssp ECCCSCEEEEE----EETT-EEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEE
T ss_pred ccccEEEEEEe----ccCC-EEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEec
Confidence 11111222231 2344 77778777777776544 3322222222 55699999887778888999999999887
Q ss_pred CCC
Q 016134 390 LAK 392 (394)
Q Consensus 390 ~~~ 392 (394)
+.+
T Consensus 998 ~~~ 1000 (1158)
T 3ei3_A 998 DSA 1000 (1158)
T ss_dssp CTT
T ss_pred CCC
Confidence 654
No 290
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.38 E-value=0.53 Score=42.47 Aligned_cols=210 Identities=10% Similarity=0.030 Sum_probs=115.3
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeC-CCce--eecCCC---cE-EEecCCCCcEEEEEEcCCEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSR-DGTA--WNIESS---AE-FSLDGPVGEVYSMVVANEML 226 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~-Dg~v--Wd~~~~---~~-~~~~~~~~~v~~l~~~~~~l 226 (394)
.|+..|+.+. +....+ .....+.+++|++++..|+-+.. ++.| +++... .. ..+
T Consensus 11 ~I~~i~~~~~-~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~----------------- 71 (316)
T 1ijq_A 11 EVRKMTLDRS-EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV----------------- 71 (316)
T ss_dssp SEEEEETTSC-CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-----------------
T ss_pred eEEEEECCCc-ceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE-----------------
Confidence 5777787654 223333 33456789999987666665544 4445 333331 10 000
Q ss_pred EEEecCCCCCCEEEEEec--CC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCC--CcEEE
Q 016134 227 FAGAQDGHTRPVTCLAVG--RS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLD--HTIKV 299 (394)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~D--g~i~v 299 (394)
+ .........|+++ ++ ++++-...+.|.+.|+........+.........++++ +..|+.+... +.|..
T Consensus 72 ~----~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~ 147 (316)
T 1ijq_A 72 I----SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 147 (316)
T ss_dssp E----CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred E----eCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEE
Confidence 0 0111223445553 44 44555667899999987544333333334567888887 4555555443 67888
Q ss_pred EEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCCEEE
Q 016134 300 WFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDKLFF 376 (394)
Q Consensus 300 wd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~~l~ 376 (394)
.++.. .....+... .-..... +++++++..++++-...+.|..+|+........... ......|++..+.+++
T Consensus 148 ~~~dG-~~~~~~~~~-~~~~P~g--la~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~ 223 (316)
T 1ijq_A 148 GGLNG-VDIYSLVTE-NIQWPNG--ITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFW 223 (316)
T ss_dssp EETTS-CCEEEEECS-SCSCEEE--EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEE
T ss_pred EcCCC-CCeEEEEEC-CCCCceE--EEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEE
Confidence 87743 333332211 1112222 235777665777777788999999975332222221 2346788885433666
Q ss_pred EEeCCCeEEEEeCC
Q 016134 377 TGDGAGMLGVWKLL 390 (394)
Q Consensus 377 tgs~Dg~I~vWd~~ 390 (394)
+-...+.|..++..
T Consensus 224 ~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 224 TDIINEAIFSANRL 237 (316)
T ss_dssp EETTTTEEEEEETT
T ss_pred EECCCCeEEEEeCC
Confidence 66677888888754
No 291
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.38 E-value=0.21 Score=44.61 Aligned_cols=189 Identities=15% Similarity=0.122 Sum_probs=91.5
Q ss_pred ccccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-------eeecCCCcEEEec
Q 016134 139 CHWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-------AWNIESSAEFSLD 210 (394)
Q Consensus 139 ~~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-------vWd~~~~~~~~~~ 210 (394)
..|+.++.........+.++|..+.. +.+..+......-..+.+ +++.++.|+.++. ++|..+.+-..+.
T Consensus 63 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 63 LVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp EEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred EEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 34444444333334568889987652 222222221122222222 5677777776653 4677666554432
Q ss_pred CCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeC-------CCeEEEEeCCCCceeE--EEcCCCCCcEEE
Q 016134 211 GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSM-------DNTIRVWELDTLEPVM--TLNDHTDAPMSL 281 (394)
Q Consensus 211 ~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~-------Dg~V~iwd~~~~~~~~--~~~~h~~~v~~l 281 (394)
....+ .....++.+++.+++.|+. -..+.+||+.+.+-.. .+.........+
T Consensus 141 ~~p~~-------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 201 (302)
T 2xn4_A 141 PMNTR-------------------RSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVG 201 (302)
T ss_dssp CCSSC-------------------CBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred CCCCc-------------------ccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEE
Confidence 21110 0111122234455555543 2458899988754222 222111222334
Q ss_pred EEcCCEEEEEeCC-----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCC-----eEEEEECCC
Q 016134 282 LCWDQFLLSCSLD-----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDN-----TVHLYELPS 351 (394)
Q Consensus 282 ~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg-----~I~iwd~~~ 351 (394)
.+.+.+++.|+.+ ..+.+||+.+.+-.. +............. ..+++ +++.|+.++ .+.+||+.+
T Consensus 202 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~r~~~~~~---~~~~~-i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 202 VLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMNMCRRNAGVC---AVNGL-LYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp EETTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCSSCCBSCEEE---EETTE-EEEECCBCSSSBCCCEEEEETTT
T ss_pred EECCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCCCccccCeEE---EECCE-EEEECCcCCCcccccEEEEcCCC
Confidence 4446677777654 468899987653222 22111111111111 12555 777776553 489999887
Q ss_pred Cc
Q 016134 352 FM 353 (394)
Q Consensus 352 ~~ 353 (394)
.+
T Consensus 277 ~~ 278 (302)
T 2xn4_A 277 DK 278 (302)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 292
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.35 E-value=0.32 Score=43.46 Aligned_cols=143 Identities=8% Similarity=0.014 Sum_probs=72.2
Q ss_pred ecCCeEEEEeCC------CeEEEEeCCCCceeE--EEcCCCCCcEEEEEcCCEEEEEeC---------CCcEEEEEeCCC
Q 016134 243 VGRSRLCSGSMD------NTIRVWELDTLEPVM--TLNDHTDAPMSLLCWDQFLLSCSL---------DHTIKVWFATGR 305 (394)
Q Consensus 243 ~~~~~l~sgs~D------g~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~---------Dg~i~vwd~~~~ 305 (394)
+.+.+++.|+.+ ..+.+||+.+.+-.. .+......-..+.+.+.+++.|+. -..+.+||+.+.
T Consensus 100 ~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 100 AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 345566666654 468899988754222 111111222333344666666653 345889998765
Q ss_pred ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCceeE--EEec-CCcEEEEEECCCC-EEE
Q 016134 306 GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFMERG--RIFS-KHEVRVIEIGPDK-LFF 376 (394)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~~~~--~~~~-~~~v~~l~~sp~~-~l~ 376 (394)
+-.. +..........+.. .. +++ +++.|+.+ ..+.+||+.+.+-.. .+.. .....++.+ ++ +++
T Consensus 180 ~W~~-~~~~p~~r~~~~~~-~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 252 (306)
T 3ii7_A 180 TWTE-LCPMIEARKNHGLV-FV--KDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYV 252 (306)
T ss_dssp EEEE-ECCCSSCCBSCEEE-EE--TTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEE
T ss_pred eEEE-CCCccchhhcceEE-EE--CCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEE
Confidence 3222 21111111111111 11 455 67766643 468899998764221 1111 112223333 45 777
Q ss_pred EEeCC-----CeEEEEeCCCC
Q 016134 377 TGDGA-----GMLGVWKLLAK 392 (394)
Q Consensus 377 tgs~D-----g~I~vWd~~~~ 392 (394)
.|+.+ ..+.+||+.+.
T Consensus 253 ~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 253 LAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EECBCSSSBCCEEEEEETTTT
T ss_pred EeCcCCCeeeeeEEEEcCCCC
Confidence 77744 46788887653
No 293
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=96.29 E-value=0.00066 Score=47.15 Aligned_cols=30 Identities=30% Similarity=0.611 Sum_probs=25.4
Q ss_pred CCCCceeEEEeeeCccCC-CCCccccccCCC
Q 016134 33 WPTNKVVCVYVLEGRCNR-NPCRFAHTESSS 62 (394)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~-~~~~~~h~~~p~ 62 (394)
......||+||++|.|.+ ..|+|.|...+.
T Consensus 12 ~~~k~~vCk~fl~G~C~~G~~C~fsH~~~~~ 42 (72)
T 2rhk_C 12 SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 42 (72)
T ss_dssp SCCCCSBCHHHHTTCCCCGGGSSSBCSCCTT
T ss_pred CCCcCeeCHHHhcCCCCCCCCCCCccccccc
Confidence 455788999999999999 789999986553
No 294
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.23 E-value=0.001 Score=46.90 Aligned_cols=31 Identities=29% Similarity=0.596 Sum_probs=26.1
Q ss_pred CCCCCceeEEEeeeCccCC-CCCccccccCCC
Q 016134 32 GWPTNKVVCVYVLEGRCNR-NPCRFAHTESSS 62 (394)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~p~ 62 (394)
.+.....+|+||++|.|.+ ..|+|.|...+.
T Consensus 5 ~~~~k~~~C~~fl~G~C~~G~~C~fsH~~~~~ 36 (77)
T 2d9n_A 5 SSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 36 (77)
T ss_dssp CSCCTTSBCHHHHTTCCSCTTSSSSBCSCCTT
T ss_pred CCCCcceeCHhHccCcCCCCCCCCCccccccC
Confidence 3556788999999999999 789999987653
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.12 E-value=0.63 Score=42.13 Aligned_cols=150 Identities=13% Similarity=0.034 Sum_probs=84.6
Q ss_pred EEEEEec---CCeEEEEeCCCeEEEEeCCCCce-eEEEcCCCCCcEEEEEc--C-CEEEEEeCCCcEEEEEeCCCceeeE
Q 016134 238 VTCLAVG---RSRLCSGSMDNTIRVWELDTLEP-VMTLNDHTDAPMSLLCW--D-QFLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 238 V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~-~~~~~~h~~~v~~l~~~--~-~~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
..+++|+ +.++.+-...+.|..+++..... ...+......+..+++. + .++++-...+.|.++++.... ...
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~ 115 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKV 115 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc-EEE
Confidence 4566775 34455555678899999876532 11222222345566665 4 445555567889999986432 222
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEe-CCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC--EEEEEeCCCeEEE
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICAC-NDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK--LFFTGDGAGMLGV 386 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~--~l~tgs~Dg~I~v 386 (394)
+.. ........+ ..+|.+..++++-. ..+.|..+++........+.. -...+.|++++++ ++++=...+.|..
T Consensus 116 l~~-~~~~~P~gi--avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 116 LFW-QELDQPRAI--ALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEC-SSCSSEEEE--EEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEe-CCCCCccEE--EEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 221 111122222 23665553555542 357888888764332222222 3457899999865 4555556778988
Q ss_pred EeCCC
Q 016134 387 WKLLA 391 (394)
Q Consensus 387 Wd~~~ 391 (394)
++++.
T Consensus 193 ~d~dG 197 (318)
T 3sov_A 193 SNLDG 197 (318)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 88763
No 296
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.11 E-value=0.98 Score=42.84 Aligned_cols=212 Identities=8% Similarity=-0.027 Sum_probs=113.4
Q ss_pred CeEEEEecCC--CCEEEEEeCCCce--eecCCCcEEEecCCCCcEEEEEEcCC-EEEEEecCCC---------------C
Q 016134 176 AVSGIALPLR--SDKLFSGSRDGTA--WNIESSAEFSLDGPVGEVYSMVVANE-MLFAGAQDGH---------------T 235 (394)
Q Consensus 176 ~V~~l~~s~~--~~~l~sgs~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~-~l~~~~~~~h---------------~ 235 (394)
....|+|+|+ ...|+.+...+.| +|.+++....+.........+++.++ .|+++....+ .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 3567777774 3445544443444 55556665555555555677777766 3333322110 0
Q ss_pred --------CCEEEEEec---CCeEEEEeCCCeEEEEeCCCCceeEEE-cC-CCCCcEEEEEc--CCEE-EEEeCCCcEEE
Q 016134 236 --------RPVTCLAVG---RSRLCSGSMDNTIRVWELDTLEPVMTL-ND-HTDAPMSLLCW--DQFL-LSCSLDHTIKV 299 (394)
Q Consensus 236 --------~~V~~l~~~---~~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~-h~~~v~~l~~~--~~~l-~s~s~Dg~i~v 299 (394)
.....++++ +.++++-..++.|+.+|..+++....+ .. .......++++ ++.| ++-...+.|+.
T Consensus 220 ~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~ 299 (433)
T 4hw6_A 220 ERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYR 299 (433)
T ss_dssp CEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEE
Confidence 111234444 233444445678999998877652332 21 22233468887 6644 44455678999
Q ss_pred EEeCC--Cce--eeEeecccCC-----------cceEEEEeeE---------CCCCCcEEEEEeCCCeEEEEECCCCcee
Q 016134 300 WFATG--RGN--LEAAYTHKED-----------NGVLALGGLN---------DPDGKPVLICACNDNTVHLYELPSFMER 355 (394)
Q Consensus 300 wd~~~--~~~--~~~~~~~~~~-----------~~~~~~~~~~---------s~~g~~~l~sgs~dg~I~iwd~~~~~~~ 355 (394)
+++.. +.. ...+...... .......+++ .+++. ++++-...+.|+.++. ++. +
T Consensus 300 ~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~-~G~-v 376 (433)
T 4hw6_A 300 VDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTP-EGR-V 376 (433)
T ss_dssp EEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECT-TSE-E
T ss_pred EeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECC-CCC-E
Confidence 88653 211 1122111000 0001112334 56666 7777777889999985 453 3
Q ss_pred EEEecC-------------------CcEEEEEEC-CCC-EEEEEeCCCeEEEEeCC
Q 016134 356 GRIFSK-------------------HEVRVIEIG-PDK-LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 356 ~~~~~~-------------------~~v~~l~~s-p~~-~l~tgs~Dg~I~vWd~~ 390 (394)
..+... .....|+++ +++ ++++=...++|+.++++
T Consensus 377 ~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 333221 237899999 667 55555567788888764
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.07 E-value=0.052 Score=55.23 Aligned_cols=140 Identities=11% Similarity=0.020 Sum_probs=78.7
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEe-CC-CcEEEEEeCCCceeeEeecc-cCCcc
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCS-LD-HTIKVWFATGRGNLEAAYTH-KEDNG 319 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s-~D-g~i~vwd~~~~~~~~~~~~~-~~~~~ 319 (394)
++++++-...+.|.++++........+.........|+++ +.+|+.+. .. +.|.++++.... ...+... .....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPN 543 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCcc
Confidence 3445555567889999987544333333223445667775 34444333 22 677777764322 2222111 11122
Q ss_pred eEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec----CCcEEEEEECCCCEEEEEeCCCeEEEEeCC
Q 016134 320 VLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS----KHEVRVIEIGPDKLFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 320 ~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~ 390 (394)
.++ ++|++..++++-...+.|..+++..... ..+.. ......|++..+.++++-...+.|..++..
T Consensus 544 Gla----vd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 544 GIT----LDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp CEE----ECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred EEE----EeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 343 4877665777777788999999875332 23322 123455666555566666677888888753
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.02 E-value=0.47 Score=45.11 Aligned_cols=147 Identities=9% Similarity=-0.018 Sum_probs=85.2
Q ss_pred CCEEEEEecC----CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeCCC----c-EEEEEeCC
Q 016134 236 RPVTCLAVGR----SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSLDH----T-IKVWFATG 304 (394)
Q Consensus 236 ~~V~~l~~~~----~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~Dg----~-i~vwd~~~ 304 (394)
.....|++++ ..|+.+...+.|+.+|+.+++... +.........++++ ++ |+.+...+ . +...+...
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCC
Confidence 3456778873 566666555899999998766544 44345567888888 66 44444321 1 22233221
Q ss_pred Ccee-eEeecccCCcceEEEEeeECC-CCCcEEEEEeCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCC-EE-EE
Q 016134 305 RGNL-EAAYTHKEDNGVLALGGLNDP-DGKPVLICACNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDK-LF-FT 377 (394)
Q Consensus 305 ~~~~-~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~-~l-~t 377 (394)
.... ..+..... ...++ ++| ++. ++++-..++.|+.+|..++.....+.. ......++|+|++ .| ++
T Consensus 217 ~~~~~~~~~~~~~-P~gia----vd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 217 GFTERLSLCNARG-AKTCA----VHPQNGK-IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp TTCCEEEEEECSS-BCCCE----ECTTTCC-EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred CeeccccccccCC-CCEEE----EeCCCCe-EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 1110 11111111 12222 478 666 777666778999999987765333322 2234579999998 44 44
Q ss_pred EeCCCeEEEEeCC
Q 016134 378 GDGAGMLGVWKLL 390 (394)
Q Consensus 378 gs~Dg~I~vWd~~ 390 (394)
-...+.|+.++++
T Consensus 291 d~~~~~I~~~~~d 303 (433)
T 4hw6_A 291 YNGKHCIYRVDYN 303 (433)
T ss_dssp ETTTTEEEEEEBC
T ss_pred eCCCCEEEEEeCC
Confidence 4566789988765
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.94 E-value=0.99 Score=41.40 Aligned_cols=217 Identities=13% Similarity=0.124 Sum_probs=119.2
Q ss_pred CeEEEEEcCCCceEEEEecccCCCeEEEEecCC----CC---EEEEEeCC---Cc--eeec--CCCcEEEecCCCCcEEE
Q 016134 153 RFLHSWFCGEGLTMLAKLEGHEKAVSGIALPLR----SD---KLFSGSRD---GT--AWNI--ESSAEFSLDGPVGEVYS 218 (394)
Q Consensus 153 ~~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~----~~---~l~sgs~D---g~--vWd~--~~~~~~~~~~~~~~v~~ 218 (394)
+-+.++|+ ++ +.++.+.. +.++.+.+-|+ ++ ++++...+ .+ ++++ .++....+.....++.
T Consensus 50 ~gL~Vydl-~G-~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~- 124 (355)
T 3amr_A 50 SGLVVYSL-DG-KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIA- 124 (355)
T ss_dssp TEEEEEET-TS-CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEE-
T ss_pred CCEEEEcC-CC-cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcC-
Confidence 36999999 55 66777754 56777777663 22 22333332 33 5765 3443222211100010
Q ss_pred EEEcCCEEEEEecCCCCCCEEEEEe--c---CC-eEEEEeCCCeEEEEeCC-------CCceeEEEcCCCCCcEEEEEc-
Q 016134 219 MVVANEMLFAGAQDGHTRPVTCLAV--G---RS-RLCSGSMDNTIRVWELD-------TLEPVMTLNDHTDAPMSLLCW- 284 (394)
Q Consensus 219 l~~~~~~l~~~~~~~h~~~V~~l~~--~---~~-~l~sgs~Dg~V~iwd~~-------~~~~~~~~~~h~~~v~~l~~~- 284 (394)
.-...+..+++ + +. ++++...+|.+..|++. +.+.+++|... +.+-.+..+
T Consensus 125 --------------t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd 189 (355)
T 3amr_A 125 --------------TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADD 189 (355)
T ss_dssp --------------CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEET
T ss_pred --------------CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcC
Confidence 00133344444 3 22 57777888999999882 34567777743 567777777
Q ss_pred -CCEEEEEeCCCcEEEEEeCC-----CceeeEeecccCCcceEEEEeeECCCCC-cEEEEEeCCCeEEEEECC-CCceeE
Q 016134 285 -DQFLLSCSLDHTIKVWFATG-----RGNLEAAYTHKEDNGVLALGGLNDPDGK-PVLICACNDNTVHLYELP-SFMERG 356 (394)
Q Consensus 285 -~~~l~s~s~Dg~i~vwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~~l~sgs~dg~I~iwd~~-~~~~~~ 356 (394)
...|+.+-++.-|..+|.+- .+.+..+....-....-.+.....++++ ++|++.-.+++..+||.. +.+.+.
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEE
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEE
Confidence 57899999987776667542 2233222111000122223333456666 355555467899999997 667777
Q ss_pred EEec-----------CCc--EEEEEEC---CCCEEEEEeC---------CCeEEEEeC
Q 016134 357 RIFS-----------KHE--VRVIEIG---PDKLFFTGDG---------AGMLGVWKL 389 (394)
Q Consensus 357 ~~~~-----------~~~--v~~l~~s---p~~~l~tgs~---------Dg~I~vWd~ 389 (394)
.+.- ... |..+.+. |.|++++-.. +...++.++
T Consensus 270 ~f~Ig~~~~idgv~eTDG~~v~~~~lG~~fP~Gl~V~qDg~n~~~~~~~~qnFk~v~w 327 (355)
T 3amr_A 270 DFRITDGPETDGTSDTDGIDVLGFGLGPEYPFGIFVAQDGENIDHGQKANQNFKIVPW 327 (355)
T ss_dssp EEEECCCSSSCCCCSCCCEEEECSCCSTTCTTCEEEEEESSCEETTEECCCEEEEEEH
T ss_pred EEEecCCCCceeeeccCcceEEccccCCCCCCcEEEEecCCcccCCCCcCceEEEEEH
Confidence 7631 112 3444442 4566766554 466777664
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.85 E-value=1.7 Score=43.37 Aligned_cols=212 Identities=12% Similarity=0.004 Sum_probs=107.7
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEeCC-Cce--eecCCCcE--EEecCCCCcEEEEEEcCCEEEE
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGSRD-GTA--WNIESSAE--FSLDGPVGEVYSMVVANEMLFA 228 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-g~v--Wd~~~~~~--~~~~~~~~~v~~l~~~~~~l~~ 228 (394)
.|+.-++.........+...-....+|+|++.+..|+-+... +.| ++++.... ..+.
T Consensus 19 ~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------------------ 80 (619)
T 3s94_A 19 DLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------------------ 80 (619)
T ss_dssp BEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------------------
T ss_pred cEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------------------
Confidence 567777754321222233344567899999877776655443 333 33332211 0000
Q ss_pred EecCCCCCCEEEEEec--CC-eEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC--CCcEEEEE
Q 016134 229 GAQDGHTRPVTCLAVG--RS-RLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL--DHTIKVWF 301 (394)
Q Consensus 229 ~~~~~h~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--Dg~i~vwd 301 (394)
.-......|+++ ++ ++++-...+.|.+.++........+.........|+++ +.+|+.... ...|...+
T Consensus 81 ----~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~ 156 (619)
T 3s94_A 81 ----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAG 156 (619)
T ss_dssp ----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ----CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEE
Confidence 111345566665 34 45555667899999987544333333344556788886 445555443 35666666
Q ss_pred eCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe-cCCcEEEEEECCCCEEEEEeC
Q 016134 302 ATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-SKHEVRVIEIGPDKLFFTGDG 380 (394)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-~~~~v~~l~~sp~~~l~tgs~ 380 (394)
+.. .....+.... -.....+ .+++++..++++-...+.|..+|+.......... ......+|++..+.++++-..
T Consensus 157 ~dG-~~~~~l~~~~-~~~P~Gl--ald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~ 232 (619)
T 3s94_A 157 MDG-SSRFIIINSE-IYWPNGL--TLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWS 232 (619)
T ss_dssp TTS-CSCEEEECSS-CSSEEEE--EEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEEEEECTT
T ss_pred CCC-CceEEEEeCC-CCCCcEE--EEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCC
Confidence 543 3223332111 1122222 2467666577777777889999987543332222 122235677766645555556
Q ss_pred CCeEEEEeCCC
Q 016134 381 AGMLGVWKLLA 391 (394)
Q Consensus 381 Dg~I~vWd~~~ 391 (394)
.+.|...|..+
T Consensus 233 ~~~V~~~d~~t 243 (619)
T 3s94_A 233 THSILACNKYT 243 (619)
T ss_dssp TCSEEEEESSS
T ss_pred CCEEEEEECCC
Confidence 67788877654
No 301
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.76 E-value=1 Score=40.30 Aligned_cols=105 Identities=8% Similarity=0.035 Sum_probs=51.7
Q ss_pred cCCeEEEEeCC-------CeEEEEeCCCCceeE--EEcCCCCCcEEEEEcCCEEEEEeC------CCcEEEEEeCCCcee
Q 016134 244 GRSRLCSGSMD-------NTIRVWELDTLEPVM--TLNDHTDAPMSLLCWDQFLLSCSL------DHTIKVWFATGRGNL 308 (394)
Q Consensus 244 ~~~~l~sgs~D-------g~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~------Dg~i~vwd~~~~~~~ 308 (394)
.+.+++.|+.+ ..+.+||+.+.+-.. .+......-..+.+.+.+++.|+. -..+.+||+.+.+-.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 45556666643 357888987654221 111111111233334666666653 235889998765422
Q ss_pred eEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCc
Q 016134 309 EAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFM 353 (394)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~ 353 (394)
. +..........+.. .-+++ +++.|+.+ ..+.+||+.+.+
T Consensus 189 ~-~~~~p~~r~~~~~~---~~~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 189 D-LAPMKTPRSMFGVA---IHKGK-IVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp E-ECCCSSCCBSCEEE---EETTE-EEEEEEEETTEEEEEEEEEETTTCC
T ss_pred E-CCCCCCCcccceEE---EECCE-EEEEcCcCCCCccceEEEEECCCCe
Confidence 2 21111111111111 11455 66666543 357789988764
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.75 E-value=0.9 Score=40.39 Aligned_cols=187 Identities=7% Similarity=-0.004 Sum_probs=90.5
Q ss_pred cccCCCeecCCCCCeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCC-Cc-------eeecCCCcEEEec
Q 016134 140 HWLLGNCVRGDECRFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRD-GT-------AWNIESSAEFSLD 210 (394)
Q Consensus 140 ~~~~~~~~~g~~~~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~D-g~-------vWd~~~~~~~~~~ 210 (394)
.|+.++.. ......+.++|..+.. +.+..+......-..+.+ ++++++.|+.+ +. ++|..+.+-..+.
T Consensus 58 lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 58 VYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp EEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred EEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 44444433 3444578889987662 333333222222222222 56777777765 22 4677776654332
Q ss_pred CCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEecCCeEEEEeC---------CCeEEEEeCCCCceeE--EEcCCCCCcE
Q 016134 211 GPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVGRSRLCSGSM---------DNTIRVWELDTLEPVM--TLNDHTDAPM 279 (394)
Q Consensus 211 ~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~~~~l~sgs~---------Dg~V~iwd~~~~~~~~--~~~~h~~~v~ 279 (394)
....+ ...-..+.+++.+++.|+. -..+.+||+.+.+-.. .+......-.
T Consensus 135 ~~p~~-------------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 195 (306)
T 3ii7_A 135 SMLTQ-------------------RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHG 195 (306)
T ss_dssp CCSSC-------------------CBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CCcCC-------------------cceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcce
Confidence 11100 0111122234445555543 3458899998754221 1111111223
Q ss_pred EEEEcCCEEEEEeCC-----CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEEC
Q 016134 280 SLLCWDQFLLSCSLD-----HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYEL 349 (394)
Q Consensus 280 ~l~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~ 349 (394)
.+.+.+.+++.|+.+ ..+.+||+.+.+-. .+............. .. ++. +++.|+.+ ..+.+||+
T Consensus 196 ~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~-~~--~~~-i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 196 LVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK-MVSPMPWKGVTVKCA-AV--GSI-VYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EEEETTEEEEECCEETTEEBCCEEEEETTTTEEE-ECCCCSCCBSCCEEE-EE--TTE-EEEEECBCSSSBCCEEEEEET
T ss_pred EEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE-ECCCCCCCccceeEE-EE--CCE-EEEEeCcCCCeeeeeEEEEcC
Confidence 333346666666543 46888998765322 221111111111111 11 455 77778744 56899999
Q ss_pred CCCc
Q 016134 350 PSFM 353 (394)
Q Consensus 350 ~~~~ 353 (394)
.+.+
T Consensus 271 ~~~~ 274 (306)
T 3ii7_A 271 ETDK 274 (306)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 8764
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.67 E-value=2.3 Score=43.68 Aligned_cols=148 Identities=12% Similarity=0.030 Sum_probs=85.2
Q ss_pred EEEEec--C-CeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC-C-CcEEEEEeCCCceeeEe
Q 016134 239 TCLAVG--R-SRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL-D-HTIKVWFATGRGNLEAA 311 (394)
Q Consensus 239 ~~l~~~--~-~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~-D-g~i~vwd~~~~~~~~~~ 311 (394)
..|+++ + +++++-...+.|.+.++........+.........|+++ ..+|+.... . ..|.+.++... ....+
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~-~~~~l 552 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSL 552 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEE
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC-ceEEE
Confidence 345554 4 455666678899999997544433333344567888887 345555543 2 67888887543 33333
Q ss_pred ecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec---CCcEEEEEECCCCEEEEEeCCCeEEEEe
Q 016134 312 YTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS---KHEVRVIEIGPDKLFFTGDGAGMLGVWK 388 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~---~~~v~~l~~sp~~~l~tgs~Dg~I~vWd 388 (394)
.... ......+ ++++.+..++++-.....|..+++........+.. -....+|++..+.++++-...+.|...+
T Consensus 553 v~~~-l~~P~GL--avD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 553 VTEN-IQWPNGI--TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp ECSS-CSCEEEE--EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred EeCC-CCCceEE--EEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 2211 1122222 23655554667666778999999875544333332 2245677775443555555667777776
Q ss_pred CC
Q 016134 389 LL 390 (394)
Q Consensus 389 ~~ 390 (394)
..
T Consensus 630 k~ 631 (791)
T 3m0c_C 630 RL 631 (791)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.67 E-value=0.7 Score=44.64 Aligned_cols=149 Identities=11% Similarity=-0.054 Sum_probs=87.5
Q ss_pred CEEEEEecC---CeEEEEeC-CCeEEEEeCCCCceeEEEcCC---CCCcEEEEE-------c--CCEEEEEeCCC-----
Q 016134 237 PVTCLAVGR---SRLCSGSM-DNTIRVWELDTLEPVMTLNDH---TDAPMSLLC-------W--DQFLLSCSLDH----- 295 (394)
Q Consensus 237 ~V~~l~~~~---~~l~sgs~-Dg~V~iwd~~~~~~~~~~~~h---~~~v~~l~~-------~--~~~l~s~s~Dg----- 295 (394)
....|+|++ +.|+.+.. .+.|++.|+++++....+..- ......++| + ++.|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 455677773 33444443 467999999876655444321 234788999 5 67666666543
Q ss_pred --cEEEEEeCC-Ccee-----eEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC-------CCce------
Q 016134 296 --TIKVWFATG-RGNL-----EAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP-------SFME------ 354 (394)
Q Consensus 296 --~i~vwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~-------~~~~------ 354 (394)
.|.+++... +... ..+.....+ ..++ .+|++..++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p-~gia----vdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQC-NGAT----IHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCC-CCEE----ECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CceEEEEecCCCCceeecccceeeccCCCc-eEEE----EcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 255665333 1211 122222222 2223 488555488888888999999987 4443
Q ss_pred -----eEEE---ecCCcEEEEEECCCC-EEEE-EeCCCeEEEEeCC
Q 016134 355 -----RGRI---FSKHEVRVIEIGPDK-LFFT-GDGAGMLGVWKLL 390 (394)
Q Consensus 355 -----~~~~---~~~~~v~~l~~sp~~-~l~t-gs~Dg~I~vWd~~ 390 (394)
...+ ......+.|+|+|++ .|+. =....+|+.++..
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1122 224457899999999 4444 4566788886643
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.63 E-value=1.5 Score=43.77 Aligned_cols=152 Identities=12% Similarity=0.049 Sum_probs=89.0
Q ss_pred CCEEEEEec--CCe-EEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCceee
Q 016134 236 RPVTCLAVG--RSR-LCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRGNLE 309 (394)
Q Consensus 236 ~~V~~l~~~--~~~-l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~~~ 309 (394)
..+..|+|+ .+. +++-..++.|..+++........+......+..++++ +. +.++-...+.|.+.++.... ..
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~ 115 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQ 115 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-CE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EE
Confidence 345667776 344 4455567889999987544433333333456677775 44 45555567889999986433 22
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEE-eCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC--EEEEEeCCCeEEE
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICA-CNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--LFFTGDGAGMLGV 386 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~l~tgs~Dg~I~v 386 (394)
.+... .-.....+ +.+|....++++- +..+.|...++...........-.....|++++++ ++++=...+.|..
T Consensus 116 ~l~~~-~l~~P~~i--avdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 116 VLVWK-DLDSPRAL--ALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp EEECS-SCCCEEEE--EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeC-CCCCcccE--EEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 22211 11122222 3477544355554 23567888887655443333345678999999975 4445456678888
Q ss_pred EeCCC
Q 016134 387 WKLLA 391 (394)
Q Consensus 387 Wd~~~ 391 (394)
.++..
T Consensus 193 ~d~dG 197 (628)
T 4a0p_A 193 SNMLG 197 (628)
T ss_dssp EETTS
T ss_pred EcCCC
Confidence 88764
No 306
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.62 E-value=0.59 Score=41.79 Aligned_cols=175 Identities=11% Similarity=0.074 Sum_probs=84.2
Q ss_pred CeEEEEEcCCCc-eEEEEecccCCCeEEEEecCCCCEEEEEeCCCc-------eeecCCCcEEEecCCCCcEEEEEEcCC
Q 016134 153 RFLHSWFCGEGL-TMLAKLEGHEKAVSGIALPLRSDKLFSGSRDGT-------AWNIESSAEFSLDGPVGEVYSMVVANE 224 (394)
Q Consensus 153 ~~i~iWd~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~l~sgs~Dg~-------vWd~~~~~~~~~~~~~~~v~~l~~~~~ 224 (394)
..+.++|..+.. +.+..+......-..+.+ ++++++.|+.++. ++|..+.+-..+.....
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~---------- 157 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT---------- 157 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS----------
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc----------
Confidence 467888887652 222222211112222222 5677777765543 46776665443321110
Q ss_pred EEEEEecCCCCCCEEEEEecCCeEEEEeCC-----CeEEEEeCCCCcee--EEEcCCCCCcEEEEEcCCEEEEEeCC---
Q 016134 225 MLFAGAQDGHTRPVTCLAVGRSRLCSGSMD-----NTIRVWELDTLEPV--MTLNDHTDAPMSLLCWDQFLLSCSLD--- 294 (394)
Q Consensus 225 ~l~~~~~~~h~~~V~~l~~~~~~l~sgs~D-----g~V~iwd~~~~~~~--~~~~~h~~~v~~l~~~~~~l~s~s~D--- 294 (394)
....-.++.+.+.+++.|+.+ ..+.+||+.+.+-. ..+......-..+.+.+.+++.|+.+
T Consensus 158 ---------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 228 (308)
T 1zgk_A 158 ---------RRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD 228 (308)
T ss_dssp ---------CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred ---------cccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC
Confidence 001111222345555666543 46889998765421 11111112223344446666777654
Q ss_pred --CcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCC-----CeEEEEECCCCc
Q 016134 295 --HTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACND-----NTVHLYELPSFM 353 (394)
Q Consensus 295 --g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d-----g~I~iwd~~~~~ 353 (394)
..+.+||+.+.+-.. +............. .-+++ +++.|+.+ ..+.+||+.+.+
T Consensus 229 ~~~~v~~yd~~~~~W~~-~~~~p~~r~~~~~~---~~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 229 QLNSVERYDVETETWTF-VAPMKHRRSALGIT---VHQGR-IYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BCCCEEEEETTTTEEEE-CCCCSSCCBSCEEE---EETTE-EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ccceEEEEeCCCCcEEE-CCCCCCCccceEEE---EECCE-EEEEcCcCCCcccceEEEEcCCCCE
Confidence 568899987653222 21111111111111 11455 77777643 467888888754
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.30 E-value=2.6 Score=42.00 Aligned_cols=212 Identities=12% Similarity=-0.004 Sum_probs=116.4
Q ss_pred eEEEEEcCCCceEEEEecccCCCeEEEEecCCCCEEEEEe-CCCcee--ecCCCcEEEecCCCCcEEEEEEcCCEEEEEe
Q 016134 154 FLHSWFCGEGLTMLAKLEGHEKAVSGIALPLRSDKLFSGS-RDGTAW--NIESSAEFSLDGPVGEVYSMVVANEMLFAGA 230 (394)
Q Consensus 154 ~i~iWd~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~vW--d~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~ 230 (394)
.|+.-++++...........-..+.+|+|++.+..|+-+. .++.|+ +++......+..
T Consensus 16 ~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~------------------- 76 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE------------------- 76 (628)
T ss_dssp EEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-------------------
T ss_pred cEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe-------------------
Confidence 6778888654221111122345688999998766666544 444453 333222111100
Q ss_pred cCCCCCCEEEEEe--c-CCeEEEEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CCEEEEEeC--CCcEEEEEeC
Q 016134 231 QDGHTRPVTCLAV--G-RSRLCSGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQFLLSCSL--DHTIKVWFAT 303 (394)
Q Consensus 231 ~~~h~~~V~~l~~--~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~--Dg~i~vwd~~ 303 (394)
. + ......|++ . ++++++-...+.|.+.++........+.........|+++ ...|+.... ...|...++.
T Consensus 77 ~-g-~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 77 F-G-LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp S-S-CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred C-C-CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 0 1 112334444 3 4455555667899999987543322233344567888887 345555542 4677777765
Q ss_pred CCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCCEEEEEeCCCe
Q 016134 304 GRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDKLFFTGDGAGM 383 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~~l~tgs~Dg~ 383 (394)
... ...+.... .....+ .+++++..++++-...+.|..+|+.................|++..+.++++-...+.
T Consensus 155 G~~-~~~l~~~~--~~P~Gl--alD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~ 229 (628)
T 4a0p_A 155 GSE-RTTLVPNV--GRANGL--TIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRS 229 (628)
T ss_dssp SCS-CEEEECSC--SSEEEE--EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTE
T ss_pred CCc-eEEEECCC--CCcceE--EEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCE
Confidence 433 33332211 122222 3477666577777778899999997654422222234466888876436666666788
Q ss_pred EEEEeCCC
Q 016134 384 LGVWKLLA 391 (394)
Q Consensus 384 I~vWd~~~ 391 (394)
|...|..+
T Consensus 230 I~~~dk~t 237 (628)
T 4a0p_A 230 IERANKTS 237 (628)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 88887544
No 308
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.27 E-value=1.4 Score=38.53 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=90.8
Q ss_pred CCCCCEEEEEec--CC-eEEEEeCCCeEEEEeCCCCceeEEEcC-CCCCcEEEEEc-CCEE-EEEeCCCcEEEEEeCCCc
Q 016134 233 GHTRPVTCLAVG--RS-RLCSGSMDNTIRVWELDTLEPVMTLND-HTDAPMSLLCW-DQFL-LSCSLDHTIKVWFATGRG 306 (394)
Q Consensus 233 ~h~~~V~~l~~~--~~-~l~sgs~Dg~V~iwd~~~~~~~~~~~~-h~~~v~~l~~~-~~~l-~s~s~Dg~i~vwd~~~~~ 306 (394)
+-...+..|+++ ++ ++++...++.|...|+. ++.++.+.- -....-.|++. +..+ ++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 445678888887 34 45556778899999998 888877742 22456778887 3344 444457789999887655
Q ss_pred eeeEeecc-------cCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECC---CCceeEEEec--------CCcEEEEE
Q 016134 307 NLEAAYTH-------KEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELP---SFMERGRIFS--------KHEVRVIE 368 (394)
Q Consensus 307 ~~~~~~~~-------~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~---~~~~~~~~~~--------~~~v~~l~ 368 (394)
.+...... ......-.+ +++|.++.+++ +.+.....||.+. ....+..+.. ...+.+++
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGL--A~d~~~~~L~v-a~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGL--AYSRQDHTFWF-FKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEE--EEETTTTEEEE-EEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred eeeeeeeeccccccccccCCcceE--EEeCCCCEEEE-EECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 32211111 111111222 35888874555 4444344455443 1111122211 23578999
Q ss_pred ECCCC--EEEEEeCCCeEEEEeCCC
Q 016134 369 IGPDK--LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 369 ~sp~~--~l~tgs~Dg~I~vWd~~~ 391 (394)
++|.. +++.......|.++|.+.
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTC
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCC
Confidence 99976 677777777888887654
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.07 E-value=4.6 Score=43.43 Aligned_cols=143 Identities=14% Similarity=0.113 Sum_probs=87.3
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEcCC-CCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEE
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLNDH-TDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLAL 323 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h-~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 323 (394)
++.++=... ..|++.+......+..+... ...|...+..+..++.++ .+.+.++.+..++ +.......-...+.++
T Consensus 483 ~~~ivQVt~-~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~-g~~l~~fel~~~~-L~~~~~~~l~~evscl 559 (1158)
T 3ei3_A 483 HQQLIQITS-ASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAV-GRALYYLQIHPQE-LRQISHTEMEHEVACL 559 (1158)
T ss_dssp TTEEEEEES-SCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEE-TTEEEEEEEETTE-EEEEEEEECSSCEEEE
T ss_pred CCeEEEEec-CEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEE-CCEEEEEEeeCCc-eeeecccCCCCceEEE
Confidence 344444443 45788887666667777643 346777777777777775 6788888887643 2222222223344444
Q ss_pred EeeECCCC---CcEEEEEeC-CCeEEEEECCCCceeEEEec--CCcEEEEEECC-CC--EEEEEeCCCeEEEEeCC
Q 016134 324 GGLNDPDG---KPVLICACN-DNTVHLYELPSFMERGRIFS--KHEVRVIEIGP-DK--LFFTGDGAGMLGVWKLL 390 (394)
Q Consensus 324 ~~~~s~~g---~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp-~~--~l~tgs~Dg~I~vWd~~ 390 (394)
.....+++ ..+++.|.. |++|+|+++++.+.+..... .....++.+.. ++ +|..|-.||.+.-+.++
T Consensus 560 ~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 560 DITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp ECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred EeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 43222221 238888986 99999999998766654333 22344443332 23 89999999998766654
No 310
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.83 E-value=2.2 Score=38.54 Aligned_cols=204 Identities=9% Similarity=0.043 Sum_probs=104.4
Q ss_pred cCCCeEEEEecCCCCEEEEEeCCCceeecCC-CcEEEec-----CCCCcEEEEEEcCCEEEEEecC--------------
Q 016134 173 HEKAVSGIALPLRSDKLFSGSRDGTAWNIES-SAEFSLD-----GPVGEVYSMVVANEMLFAGAQD-------------- 232 (394)
Q Consensus 173 h~~~V~~l~~s~~~~~l~sgs~Dg~vWd~~~-~~~~~~~-----~~~~~v~~l~~~~~~l~~~~~~-------------- 232 (394)
-...+.+|.|.+++..++ ++.++.|+.... ++.-... .....+..|.+.+..++++...
T Consensus 34 ~~~~~~~v~~~~~~~~~~-~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~ 112 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWL-VGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWS 112 (327)
T ss_dssp CSSCEEEEEESSSSCEEE-EETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEESSTTSSCE
T ss_pred CCCcEEEEEECCCCcEEE-EcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEECCCCCCce
Confidence 345799999987777777 456676654433 3322111 1244688888877633333222
Q ss_pred ------CCCCCEEEEEec-CCeEEEEeCCCeEEEEeCCCCceeEEE-cCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEe
Q 016134 233 ------GHTRPVTCLAVG-RSRLCSGSMDNTIRVWELDTLEPVMTL-NDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFA 302 (394)
Q Consensus 233 ------~h~~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~~~~~-~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~ 302 (394)
.+...+..|.+. ++.++.++.++.|..- .+.++.-..+ ..+...+..+.+. +.+++. +.++.+..-+-
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~-g~~G~~~~S~d 190 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAV-SSRGSFYSTWE 190 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEE-ETTSSEEEEEC
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEE-ECCCcEEEEeC
Confidence 122456777764 4455455556654321 2223322222 3455678888887 445544 45555443321
Q ss_pred CCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe-----cCCcEEEEEECCCCEEEE
Q 016134 303 TGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIF-----SKHEVRVIEIGPDKLFFT 377 (394)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~-----~~~~v~~l~~sp~~~l~t 377 (394)
..+.....+.. ........+ .+.+++. +++ .+.+|.+++.+...++....+. ....+..+++.+++.++.
T Consensus 191 ~gG~tW~~~~~-~~~~~~~~~--~~~~~g~-~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~ 265 (327)
T 2xbg_A 191 PGQTAWEPHNR-TTSRRLHNM--GFTPDGR-LWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWL 265 (327)
T ss_dssp TTCSSCEEEEC-CSSSCEEEE--EECTTSC-EEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEE
T ss_pred CCCCceeECCC-CCCCcccee--EECCCCC-EEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEE
Confidence 11222222211 111222322 3578887 554 4567888776433233222221 123588999998874444
Q ss_pred EeCCCeE
Q 016134 378 GDGAGML 384 (394)
Q Consensus 378 gs~Dg~I 384 (394)
++.++.|
T Consensus 266 ~g~~g~i 272 (327)
T 2xbg_A 266 AGGAGAL 272 (327)
T ss_dssp EESTTCE
T ss_pred EeCCCeE
Confidence 4456766
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.66 E-value=2.5 Score=38.39 Aligned_cols=117 Identities=9% Similarity=0.077 Sum_probs=67.6
Q ss_pred cccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEc
Q 016134 81 LKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFC 160 (394)
Q Consensus 81 ~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~ 160 (394)
-+|..+|+.-=+.+++.+.|+++..-.+.- ... ..+-+| +|+......-=.+..|+-|++
T Consensus 74 MnP~~~ViALrag~~LQiFnletK~klks~-----------~~~-----e~VvfW----kWis~~~L~lVT~taVyHWs~ 133 (365)
T 2xzh_A 74 MNPASKVIALKAGKTLQIFNIEMKSKMKAH-----------TMT-----DDVTFW----KWISLNTVALVTDNAVYHWSM 133 (365)
T ss_dssp ECSSSSEEEEEETTEEEEEETTTTEEEEEE-----------ECS-----SCEEEE----EECSSSEEEEEESSEEEEEES
T ss_pred eCCCccEEEEecCCeEEEechHHhhhhcce-----------ecC-----CccEEE----EecCCCeEEEEcCCcEEEEcc
Confidence 457777665555788999999976521100 000 001111 233222111111227999999
Q ss_pred CCCceEEEEecccC----CCeEEEEecCCCCEEEEEeC---CCc------eeecCCCcEEEecCCCCcEE
Q 016134 161 GEGLTMLAKLEGHE----KAVSGIALPLRSDKLFSGSR---DGT------AWNIESSAEFSLDGPVGEVY 217 (394)
Q Consensus 161 ~~~~~~~~~l~~h~----~~V~~l~~s~~~~~l~sgs~---Dg~------vWd~~~~~~~~~~~~~~~v~ 217 (394)
+....+.+.+.-|. ..|..-..+++.+.++-.+- ++. +|..+.+....+.+|.....
T Consensus 134 ~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~ 203 (365)
T 2xzh_A 134 EGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFA 203 (365)
T ss_dssp STTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEE
T ss_pred cCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeE
Confidence 76667777777664 45777777888887665443 443 68888877777766654433
No 312
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.49 E-value=0.052 Score=55.23 Aligned_cols=148 Identities=12% Similarity=0.058 Sum_probs=79.7
Q ss_pred EEEEEec--CCeEEEE-eCCCeEEEEeCCC----CceeEEEcCCCCCcEEEEEc---CCEEEEEeCCCcEEEEEeCCCce
Q 016134 238 VTCLAVG--RSRLCSG-SMDNTIRVWELDT----LEPVMTLNDHTDAPMSLLCW---DQFLLSCSLDHTIKVWFATGRGN 307 (394)
Q Consensus 238 V~~l~~~--~~~l~sg-s~Dg~V~iwd~~~----~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~Dg~i~vwd~~~~~~ 307 (394)
+..|+|+ .+.|+.+ ...+.|+.+++.. ......+......+..|++. +.++++-...+.|.++++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~- 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK- 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC-
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc-
Confidence 4455665 3444444 4567888888875 22222222112234456654 3444554567889999876443
Q ss_pred eeEeec-ccCCcceEEEEeeECCCCCcEEEEEeCC-CeEEEEECCCCceeEEEec--CCcEEEEEECCCC--EEEEEeCC
Q 016134 308 LEAAYT-HKEDNGVLALGGLNDPDGKPVLICACND-NTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK--LFFTGDGA 381 (394)
Q Consensus 308 ~~~~~~-~~~~~~~~~~~~~~s~~g~~~l~sgs~d-g~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~--~l~tgs~D 381 (394)
...+.. .......++ ++|.+..++++-... +.|..+++... ....+.. -...+.|+|+|++ ++++-...
T Consensus 487 ~~~l~~~~~~~P~gia----vDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~ 561 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIV----VDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKL 561 (699)
T ss_dssp EEEECCCSSCCCCCEE----CCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTT
T ss_pred eEEEEeCCCCCcceEE----EccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCC
Confidence 222222 111122333 377655355554333 67888777543 2222322 3456789999876 55555667
Q ss_pred CeEEEEeCCC
Q 016134 382 GMLGVWKLLA 391 (394)
Q Consensus 382 g~I~vWd~~~ 391 (394)
+.|.++++..
T Consensus 562 ~~I~~~d~dG 571 (699)
T 1n7d_A 562 HSISSIDVNG 571 (699)
T ss_dssp TEEEEECSSS
T ss_pred CeEEEEccCC
Confidence 7899888754
No 313
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.35 E-value=3.1 Score=38.22 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=73.0
Q ss_pred CCCeEEEEeCCC--Cce-eEEEcC-----CCCCcEEEEEc----CC-EEEEEe-C--CCcEEEEEeCCCceeeEee-ccc
Q 016134 253 MDNTIRVWELDT--LEP-VMTLND-----HTDAPMSLLCW----DQ-FLLSCS-L--DHTIKVWFATGRGNLEAAY-THK 315 (394)
Q Consensus 253 ~Dg~V~iwd~~~--~~~-~~~~~~-----h~~~v~~l~~~----~~-~l~s~s-~--Dg~i~vwd~~~~~~~~~~~-~~~ 315 (394)
.+|.|.++|+++ .+. ...+.+ ..-....+.+. +. +|+.+. . +.+|.+|++........+. ...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999974 221 112222 12356666663 22 444443 2 4678888876543222222 111
Q ss_pred C--CcceEEEEeeECCCCCcEEEEEe-----------------CCCeEEEEECCCCceeEEEecCCcEEEEEECCCC--E
Q 016134 316 E--DNGVLALGGLNDPDGKPVLICAC-----------------NDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK--L 374 (394)
Q Consensus 316 ~--~~~~~~~~~~~s~~g~~~l~sgs-----------------~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~--~ 374 (394)
. -..... +...++|. ++++.. ..+.|.-+|. ++.......-...+.++|+||+ +
T Consensus 161 g~~~~~pND--~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 161 HKLLPSVND--IVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp CTTCSSEEE--EEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEE
T ss_pred cCCCCCCce--EEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEE
Confidence 1 122222 23467787 666543 1244555554 3322222234568999999999 4
Q ss_pred EEEEeCCCeEEEEeCCCC
Q 016134 375 FFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 375 l~tgs~Dg~I~vWd~~~~ 392 (394)
+++-+..+.|..|++...
T Consensus 236 Yvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp EEEEGGGTEEEEEEECTT
T ss_pred EEEeCCCCeEEEEEECCC
Confidence 555556789999998643
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.71 E-value=3.9 Score=37.11 Aligned_cols=136 Identities=7% Similarity=-0.013 Sum_probs=80.1
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCC-----EEEEEeC---CCcEEEEEeCCC--------ceeeEeecccCC
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQ-----FLLSCSL---DHTIKVWFATGR--------GNLEAAYTHKED 317 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~-----~l~s~s~---Dg~i~vwd~~~~--------~~~~~~~~~~~~ 317 (394)
.|.+.+|..+. +..+.+++|......+...+. +|+.+.. .+++++-++... +....+....+.
T Consensus 179 ~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 179 VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp EEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred ceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 46788999874 566778888665544444422 3333332 258888888543 111122222222
Q ss_pred cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCC-CEEEEEeCCCeEEEEeCCC
Q 016134 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPD-KLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 318 ~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~-~~l~tgs~Dg~I~vWd~~~ 391 (394)
.....+....++.-. ++..-..-|.|++||++++.++..-.- ...|...+-..+ +-++.-...|.|.--.+++
T Consensus 258 ~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 258 QNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp TTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred cCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 222333333455555 677778889999999999998876655 555655554433 3455555788776665554
No 315
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.66 E-value=4 Score=37.00 Aligned_cols=48 Identities=8% Similarity=-0.185 Sum_probs=25.2
Q ss_pred CeEEEEeCCCCc--eeEEEcCCCCC-cEEEEEcCCEEEEEeC------CCcEEEEEe
Q 016134 255 NTIRVWELDTLE--PVMTLNDHTDA-PMSLLCWDQFLLSCSL------DHTIKVWFA 302 (394)
Q Consensus 255 g~V~iwd~~~~~--~~~~~~~h~~~-v~~l~~~~~~l~s~s~------Dg~i~vwd~ 302 (394)
..+.+||+.+.+ .+..+...... ...+.+.+.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 578999998754 33333211111 2233333556666553 245677876
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=93.56 E-value=5.1 Score=37.90 Aligned_cols=232 Identities=10% Similarity=0.103 Sum_probs=126.8
Q ss_pred cccccccccCCCCCcccccccCCCCCCCCCCCCCCccccccCCCCccceeeeccccccccccCCCeecCCCCCeEEEEEc
Q 016134 81 LKNNLWVSSGSEDRIPHVRNRENPGYTGPKNSSSASSTVSDESGDKSTSKKTTLKNVCCHWLLGNCVRGDECRFLHSWFC 160 (394)
Q Consensus 81 ~~~~~~~~s~s~d~~~~~w~~~~~~~~~~~~s~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~i~iWd~ 160 (394)
-+|..+|+.-=+.+++.|.|+++..-.+.- ... ..|.+| +|+......-=.+..|+-|++
T Consensus 73 MnP~~~iiALrag~~lQiFnle~K~klks~-----------~~~-----e~VvfW----kWis~~~l~lVT~taVyHWsi 132 (494)
T 1bpo_A 73 MNPASKVIALKAGKTLQIFNIEMKSKMKAH-----------TMT-----DDVTFW----KWISLNTVALVTDNAVYHWSM 132 (494)
T ss_dssp ECSSSSCEEEEETTEEEEEETTTTEEEEEE-----------ECS-----SCCCEE----EEEETTEEEEECSSEEEEEES
T ss_pred eCCCCcEEEEecCCeEEEEchHHhhhhcce-----------ecC-----CCceEE----EecCCCeEEEEcCCeeEEecc
Confidence 457777775556899999999975521100 000 000011 233222111111237999999
Q ss_pred CCCceEEEEecccC----CCeEEEEecCCCCEEEEEe---CCCc------eeecCCCcEEEecCCCCcEEEEEEcCCEEE
Q 016134 161 GEGLTMLAKLEGHE----KAVSGIALPLRSDKLFSGS---RDGT------AWNIESSAEFSLDGPVGEVYSMVVANEMLF 227 (394)
Q Consensus 161 ~~~~~~~~~l~~h~----~~V~~l~~s~~~~~l~sgs---~Dg~------vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~ 227 (394)
+....+.+.+.-|. ..|..-..+++.+.++-.+ .++. +|..+.+....+.+|......+.+..+
T Consensus 133 ~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~--- 209 (494)
T 1bpo_A 133 EGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGN--- 209 (494)
T ss_dssp SSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTC---
T ss_pred cCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCC---
Confidence 76657777777664 4577777788888877444 2443 688888777777766554433333211
Q ss_pred EEecCCCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCC--------ceeEEE----cCCCCCcEEEEEc--CCEEEEEeC
Q 016134 228 AGAQDGHTRPVTCLAVGRSRLCSGSMDNTIRVWELDTL--------EPVMTL----NDHTDAPMSLLCW--DQFLLSCSL 293 (394)
Q Consensus 228 ~~~~~~h~~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~--------~~~~~~----~~h~~~v~~l~~~--~~~l~s~s~ 293 (394)
.+...+.|++.... ..++++|-++... +....+ +...+-..++..+ -..+..-..
T Consensus 210 -----~~~~~lf~fa~r~~------~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK 278 (494)
T 1bpo_A 210 -----AEESTLFCFAVRGQ------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK 278 (494)
T ss_dssp -----SSEEEEEEEEECST------TCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred -----CCCceEEEEEEecC------CCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence 11122333332211 1368888888532 111111 1123445677777 457777888
Q ss_pred CCcEEEEEeCCCceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 294 DHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 294 Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
-|.|.+||+.++.++..-.-..+..-..+- ....+. +++-...|.|.--.+..
T Consensus 279 ~G~i~lyDleTgt~i~~nrIs~~~iF~t~~---~~~~~G--i~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 279 YGYIHLYDLETGTCIYMNRISGETIFVTAP---HEATAG--IIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE---ETTTTE--EEEEETTCEEEEEEECT
T ss_pred CceEEEEecccceeeeeecccCCceEEecc---cCCCCc--EEEEccCceEEEEEEcc
Confidence 999999999999888766544433222111 122232 33344666665555444
No 317
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=93.53 E-value=0.011 Score=40.78 Aligned_cols=23 Identities=35% Similarity=0.973 Sum_probs=19.9
Q ss_pred CceeEEEeeeCccCCCCCccccc
Q 016134 36 NKVVCVYVLEGRCNRNPCRFAHT 58 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~h~ 58 (394)
...||++|..|+|.|-.|+|+|.
T Consensus 41 ~~~vC~~flkG~C~r~~C~y~H~ 63 (70)
T 3d2q_A 41 TVTVCMDYIKGRCSREKCKYFHP 63 (70)
T ss_dssp EEEBCHHHHTTCCCCTTCCSBCC
T ss_pred cceeccccCcCCCCCCCcCeeCC
Confidence 45689999999999999999995
No 318
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=93.40 E-value=0.013 Score=41.72 Aligned_cols=24 Identities=38% Similarity=0.794 Sum_probs=21.1
Q ss_pred ceeEEEeeeCccCCC--CCccccccC
Q 016134 37 KVVCVYVLEGRCNRN--PCRFAHTES 60 (394)
Q Consensus 37 ~~~~~~~~~~~~~~~--~~~~~h~~~ 60 (394)
-.||++|.+|+|+|- .|+|.|...
T Consensus 9 ~~VCr~FlrG~C~r~d~~C~f~H~~~ 34 (83)
T 3d2n_A 9 LEVCREFQRGTCSRPDTECKFAHPSK 34 (83)
T ss_dssp EEBCTTGGGTCCCSCTTTCSSBCCCT
T ss_pred chhcHHHhcCCCCCCCCCCCCcCCCc
Confidence 459999999999997 999999843
No 319
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.32 E-value=0.014 Score=43.04 Aligned_cols=24 Identities=42% Similarity=0.830 Sum_probs=20.6
Q ss_pred ceeEEEeeeCccCCC--CCccccccC
Q 016134 37 KVVCVYVLEGRCNRN--PCRFAHTES 60 (394)
Q Consensus 37 ~~~~~~~~~~~~~~~--~~~~~h~~~ 60 (394)
..||++|++|+|+|- .|+|.|...
T Consensus 20 ~~VCr~FlrG~C~rgd~~C~FsH~~~ 45 (98)
T 2e5s_A 20 LEVCREFQRGNCARGETDCRFAHPAD 45 (98)
T ss_dssp EEBCSHHHHTCCSSHHHHCSSBCCSS
T ss_pred hhhhHHHhcCcCCCCCCCCCCcCCch
Confidence 349999999999996 699999843
No 320
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.25 E-value=6.2 Score=37.99 Aligned_cols=144 Identities=4% Similarity=-0.054 Sum_probs=81.1
Q ss_pred CeEEEEeCCCeEEEEeCC-------CCce-----------eEE-Ec-CCCCCcEEEEEc--CCEE-EEEeCCCcEEEEEe
Q 016134 246 SRLCSGSMDNTIRVWELD-------TLEP-----------VMT-LN-DHTDAPMSLLCW--DQFL-LSCSLDHTIKVWFA 302 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~-------~~~~-----------~~~-~~-~h~~~v~~l~~~--~~~l-~s~s~Dg~i~vwd~ 302 (394)
.++++-..++.|..+|+. +++. ... +. ........|+++ +++| ++-.....|+.+|.
T Consensus 260 ~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 260 ELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp CEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 445566677889999987 4443 112 21 223456789988 6644 44456678888765
Q ss_pred CCCc-ee---eEeecc---cC---------C-cceEEEEeeEC------CCCCcEEEEEeCCCeEEEEECCCCceeEEEe
Q 016134 303 TGRG-NL---EAAYTH---KE---------D-NGVLALGGLND------PDGKPVLICACNDNTVHLYELPSFMERGRIF 359 (394)
Q Consensus 303 ~~~~-~~---~~~~~~---~~---------~-~~~~~~~~~~s------~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 359 (394)
.... .+ ..+... .. . .........-+ +++. ++++-.....|+.++ .++. +.++.
T Consensus 340 dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~-~~G~-v~Tia 416 (496)
T 3kya_A 340 DEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVT-PEGI-VSTYA 416 (496)
T ss_dssp ETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGTEEEEEC-TTCB-EEEEE
T ss_pred CCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEEECCCCEEEEEe-CCCC-EEEEe
Confidence 4321 11 122211 00 0 01110111112 4555 777777888999998 4553 33332
Q ss_pred cC-------------------------CcEEEEEECCC-C-EEEEEeCCCeEEEEeCCCC
Q 016134 360 SK-------------------------HEVRVIEIGPD-K-LFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 360 ~~-------------------------~~v~~l~~sp~-~-~l~tgs~Dg~I~vWd~~~~ 392 (394)
.. .....|++.++ + ++++=....+|+.++++.+
T Consensus 417 G~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 417 GRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 21 23788999997 7 5555556778999987654
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.59 E-value=6.9 Score=36.82 Aligned_cols=140 Identities=15% Similarity=0.116 Sum_probs=84.8
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEcCC----CCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCce----------e
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLNDH----TDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGN----------L 308 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h----~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~----------~ 308 (394)
+..++.+- ++.||.-++......+.++.. -..|..+..+ |.+|+..+ +..|.|-.+..+.. +
T Consensus 32 ~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~ 109 (452)
T 3pbp_A 32 GTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAF 109 (452)
T ss_dssp TTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTT
T ss_pred CCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccccc
Confidence 55555543 588998888754444454432 2357778887 77888775 46899998873221 1
Q ss_pred --eEeecccCC--cceEEEEeeECCCCCc--EEEEEeCCCeEEEEECCCCc-eeEEEec----------CCcEEEEEECC
Q 016134 309 --EAAYTHKED--NGVLALGGLNDPDGKP--VLICACNDNTVHLYELPSFM-ERGRIFS----------KHEVRVIEIGP 371 (394)
Q Consensus 309 --~~~~~~~~~--~~~~~~~~~~s~~g~~--~l~sgs~dg~I~iwd~~~~~-~~~~~~~----------~~~v~~l~~sp 371 (394)
+.+.-.... .......+.|+|-+.. .|++-..|+.|++||+.... ....+.. ...|.+++|.+
T Consensus 110 q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~ 189 (452)
T 3pbp_A 110 QIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK 189 (452)
T ss_dssp EEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT
T ss_pred ceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC
Confidence 111111111 0112234458886543 78888999999999998632 1112211 25699999999
Q ss_pred CC-E--EEEEeCCCeEEE
Q 016134 372 DK-L--FFTGDGAGMLGV 386 (394)
Q Consensus 372 ~~-~--l~tgs~Dg~I~v 386 (394)
++ . +++.+..|.|.-
T Consensus 190 ~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 190 DGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp TSSCEEEEECTTSCEEEE
T ss_pred CCcEEEEEecCCCCCEEE
Confidence 88 4 444557787753
No 322
>3d2q_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 1.50A {Homo sapiens} PDB: 3d2s_A
Probab=92.07 E-value=0.02 Score=39.37 Aligned_cols=24 Identities=46% Similarity=0.868 Sum_probs=20.9
Q ss_pred CceeEEEeeeCccCCC--CCcccccc
Q 016134 36 NKVVCVYVLEGRCNRN--PCRFAHTE 59 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~~--~~~~~h~~ 59 (394)
...||++|++|.|+|- .|+|.|..
T Consensus 5 k~~vC~~f~~G~C~rg~~~C~f~H~~ 30 (70)
T 3d2q_A 5 RLEVCREYQRGNCNRGENDCRFAHPA 30 (70)
T ss_dssp EEEBCHHHHTTCCSSCTTTCSSBCCC
T ss_pred cchhCHHHhcCCCCCCCCCCCCccCc
Confidence 4569999999999997 69999974
No 323
>2e5s_A Otthump00000018578; ZF-CCCHX2 domain, muscleblind-like 2, isoform 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.01 E-value=0.022 Score=41.93 Aligned_cols=25 Identities=32% Similarity=0.852 Sum_probs=22.2
Q ss_pred CCCceeEEEeeeCccCCCCCccccc
Q 016134 34 PTNKVVCVYVLEGRCNRNPCRFAHT 58 (394)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~h~ 58 (394)
.....||++|..|+|.|-.|+|+|.
T Consensus 53 ~~~~~vC~~flkG~C~r~~C~y~H~ 77 (98)
T 2e5s_A 53 DNTVTVCMDYIKGRCMREKCKYFHP 77 (98)
T ss_dssp TCEEEBCHHHHHTCCCCTTCCSBCC
T ss_pred CCccccchhhccCCCCCCCcCccCC
Confidence 3456799999999999999999995
No 324
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.95 E-value=8.5 Score=38.79 Aligned_cols=182 Identities=8% Similarity=-0.010 Sum_probs=89.4
Q ss_pred CCCeEEEEEcCCCc-eEEE-E-----ecccCCCeEEEEecCCCCEEEEEeCCCc--------eeecCCCcEEEecCCCCc
Q 016134 151 ECRFLHSWFCGEGL-TMLA-K-----LEGHEKAVSGIALPLRSDKLFSGSRDGT--------AWNIESSAEFSLDGPVGE 215 (394)
Q Consensus 151 ~~~~i~iWd~~~~~-~~~~-~-----l~~h~~~V~~l~~s~~~~~l~sgs~Dg~--------vWd~~~~~~~~~~~~~~~ 215 (394)
....+.++|..++. ..+. . +......-..+.+..+++.++.|+.++. ++|..+.+-..+.....
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~- 488 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH- 488 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB-
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC-
Confidence 33468888887653 3332 1 1111112223333226778888876542 46666655443321110
Q ss_pred EEEEEEcCCEEEEEecCCCCCCEEEEEe-cCCeEEEEeCCC--eEEEEeCCCCceeEEEcC------CCCCcEEEEEc--
Q 016134 216 VYSMVVANEMLFAGAQDGHTRPVTCLAV-GRSRLCSGSMDN--TIRVWELDTLEPVMTLND------HTDAPMSLLCW-- 284 (394)
Q Consensus 216 v~~l~~~~~~l~~~~~~~h~~~V~~l~~-~~~~l~sgs~Dg--~V~iwd~~~~~~~~~~~~------h~~~v~~l~~~-- 284 (394)
....-.++.+ .+.+++.|+.++ .+.+||+.+.+= ..+.. ....-.++.+.
T Consensus 489 ------------------~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W-~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 489 ------------------TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF-KDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp ------------------CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE-EECCCSSGGGGSCCBSCEEEEETT
T ss_pred ------------------CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce-EEccCCCCCCCcccceeEEEEeCC
Confidence 0111122333 466777777654 789999987542 12211 11122334445
Q ss_pred -CCEEEEEeC--C-----CcEEEEEeCCCce-----eeEeecc-cCCcceEEEEeeECCCCCcEEEEEeC--------CC
Q 016134 285 -DQFLLSCSL--D-----HTIKVWFATGRGN-----LEAAYTH-KEDNGVLALGGLNDPDGKPVLICACN--------DN 342 (394)
Q Consensus 285 -~~~l~s~s~--D-----g~i~vwd~~~~~~-----~~~~~~~-~~~~~~~~~~~~~s~~g~~~l~sgs~--------dg 342 (394)
+.+++.|+. + ..+.+||+.+..- ...+... .......... ...+++ +++.|+. ..
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~--~~~~~~-iyv~GG~~~~~~~~~~~ 626 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK--YITPRK-LLIVGGTSPSGLFDRTN 626 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE--EEETTE-EEEECCBCSSCCCCTTT
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE--EeCCCE-EEEECCccCCCCCCCCC
Confidence 456666665 2 4588999987651 1222111 1111111111 112255 7777764 35
Q ss_pred eEEEEECCCCcee
Q 016134 343 TVHLYELPSFMER 355 (394)
Q Consensus 343 ~I~iwd~~~~~~~ 355 (394)
.|.+||+.+.+-.
T Consensus 627 ~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 627 SIISLDPLSETLT 639 (695)
T ss_dssp SEEEEETTTTEEE
T ss_pred eEEEEECCCCeEE
Confidence 6999999887543
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=91.73 E-value=4 Score=38.42 Aligned_cols=100 Identities=12% Similarity=0.124 Sum_probs=65.0
Q ss_pred CCEEEEEeCCCcEEEEEeCCCceeeEeeccc---C-CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCc-------
Q 016134 285 DQFLLSCSLDHTIKVWFATGRGNLEAAYTHK---E-DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFM------- 353 (394)
Q Consensus 285 ~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~---~-~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~------- 353 (394)
+..++.+- ++.||.-++......+.+.... . ....+. .+|+|. +||..+ +..|.|-.++.+.
T Consensus 32 ~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlv----lSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 32 GTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVI----SSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp TTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEE----ECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred CCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEE----ECCCCC-EEEEec-CCeEEEEEecCccccCcccc
Confidence 44554443 4778887877544444443321 1 233333 499999 776654 5689999998331
Q ss_pred -----eeEEEec-------CCcEEEEEECCCC----EEEEEeCCCeEEEEeCCC
Q 016134 354 -----ERGRIFS-------KHEVRVIEIGPDK----LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 354 -----~~~~~~~-------~~~v~~l~~sp~~----~l~tgs~Dg~I~vWd~~~ 391 (394)
....+.. ..+|..+.|+|-+ .|++-..|+.|++||+..
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1112221 3569999999965 899999999999999975
No 326
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=91.43 E-value=0.059 Score=38.78 Aligned_cols=25 Identities=40% Similarity=0.820 Sum_probs=21.3
Q ss_pred ceeEEEeeeCccCCC--CCccccccCC
Q 016134 37 KVVCVYVLEGRCNRN--PCRFAHTESS 61 (394)
Q Consensus 37 ~~~~~~~~~~~~~~~--~~~~~h~~~p 61 (394)
-.||+.|++|+|+|- .|+|.|...+
T Consensus 17 ~~VCrdFlrG~C~r~d~~CrfsH~~~~ 43 (89)
T 2rpp_A 17 LEVCRQFQRGTCSRSDEECKFAHPPKS 43 (89)
T ss_dssp ECBCHHHHHTCCCCCTTTSSSBCCCSS
T ss_pred hhhchHHhcCCCCCCCCCCCCcCCCcc
Confidence 449999999999996 9999997443
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.34 E-value=14 Score=37.52 Aligned_cols=187 Identities=13% Similarity=0.083 Sum_probs=102.0
Q ss_pred CCCeEEEEecCCCCEEEEEeCCCc-eeecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEec-CCeEEEE
Q 016134 174 EKAVSGIALPLRSDKLFSGSRDGT-AWNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAVG-RSRLCSG 251 (394)
Q Consensus 174 ~~~V~~l~~s~~~~~l~sgs~Dg~-vWd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~~-~~~l~sg 251 (394)
...|.+|.-..+|. |-.|..+|. .+|-.. ........ ......|.++..+ ...|..|
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~GL~ryDG~~--~~~~~~~~------------------~~~~~~i~~i~~d~~g~lWig 79 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKGLFSYDGYS--TQQHFTYG------------------ENNNTRIYCGVIIDNTYLYMG 79 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSCEEEECSSC--EEECSCTT------------------STTSSCEEEEEEETTTEEEEE
T ss_pred cceEEEEEECCCCC-EEEEECCCccccCCCc--eEEEEccC------------------CCCCceEEEEEEcCCCcEEEE
Confidence 56799998887774 555667775 244221 11111000 0123467777665 5677788
Q ss_pred eCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecc---cCCcceEEEEeeEC
Q 016134 252 SMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTH---KEDNGVLALGGLND 328 (394)
Q Consensus 252 s~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~s 328 (394)
+.+| +..||..+.+...........|.++...+..|..++.+ -|..+|..+.+. ..+... .....+.++ ..+
T Consensus 80 T~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~-~~~~~~~~~l~~~~i~~i--~~d 154 (758)
T 3ott_A 80 TDNG-ILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKL-TSFDTRRNGLPNNTIYSI--IRT 154 (758)
T ss_dssp ETTE-EEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCE-EEECHHHHCCSCSCEEEE--EEC
T ss_pred eCCC-eEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeE-EEeccCCCCcCCCeEEEE--EEc
Confidence 7665 78899887543221111223466665556667777766 688888765432 222111 111223333 246
Q ss_pred CCCCcEEEEEeCCCeEEEEECCCCceeEEEec-------CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 329 PDGKPVLICACNDNTVHLYELPSFMERGRIFS-------KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 329 ~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-------~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
.++. +.+ ++.+ -|..|+..+.... .+.. ...|.++....++ .|..|.. +-|..++..+
T Consensus 155 ~~g~-lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~ 220 (758)
T 3ott_A 155 KDNQ-IYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST 220 (758)
T ss_dssp TTCC-EEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred CCCC-EEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence 6777 444 4444 5778888765432 2221 1238888887765 5555654 3466676543
No 328
>2rpp_A Muscleblind-like protein 2; zinc finger domain, C3H, alternative splicing, cytoplasm, metal-binding, nucleus, RNA-binding, zinc, zinc-finger; NMR {Homo sapiens}
Probab=91.27 E-value=0.026 Score=40.69 Aligned_cols=23 Identities=35% Similarity=0.976 Sum_probs=21.1
Q ss_pred CceeEEEeeeCccCCCCCccccc
Q 016134 36 NKVVCVYVLEGRCNRNPCRFAHT 58 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~h~ 58 (394)
.-.||.+|..|+|.|-+|+|+|.
T Consensus 50 ~~~vC~dflkG~C~r~~Cky~H~ 72 (89)
T 2rpp_A 50 RVIACFDSLKGRCSRENCKYLHP 72 (89)
T ss_dssp BEEBCHHHHHTCCCCTTCCSBCC
T ss_pred ceeeehhhhhCcCCCCCcceecC
Confidence 35699999999999999999997
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.05 E-value=11 Score=35.77 Aligned_cols=136 Identities=7% Similarity=-0.014 Sum_probs=83.4
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEEcC-----CEEEEEeCC---CcEEEEEeCCC--------ceeeEeecccCC
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD-----QFLLSCSLD---HTIKVWFATGR--------GNLEAAYTHKED 317 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~D---g~i~vwd~~~~--------~~~~~~~~~~~~ 317 (394)
.|.+.+|..+. +..+.+++|......+...+ .+|..+... +++.|-++... +....+....+.
T Consensus 178 ~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~ 256 (494)
T 1bpo_A 178 VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (494)
T ss_dssp EEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred cceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence 46788999874 55677888876666665553 244444442 78999988543 111122222222
Q ss_pred cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 318 ~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
.....+....++... ++..-..-|.|++||+.++..+..-.- ...|...+-..+. -++.-...|.|.--.+++
T Consensus 257 ~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 257 QNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCceeEEEecccCC-EEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 233333334466655 677778899999999999988876554 5556555554443 555555788776655544
No 330
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.99 E-value=13 Score=36.80 Aligned_cols=151 Identities=9% Similarity=0.003 Sum_probs=84.3
Q ss_pred CEEEEEec--CCeEE-EEeCCCeEEEEeCCCCceeEEEcCCCCCcEEEEEc--CC-EEEEEeCCCcEEEEEeCCCceeeE
Q 016134 237 PVTCLAVG--RSRLC-SGSMDNTIRVWELDTLEPVMTLNDHTDAPMSLLCW--DQ-FLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 237 ~V~~l~~~--~~~l~-sgs~Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
.+.+|+|+ ++.|+ +-...+.|+.+++........+......+..++++ +. +.++-+..+.|.+.++... ....
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~ 428 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKI 428 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEE
Confidence 45677776 34444 44457788888887544333333333456677776 44 5555556788999988643 2333
Q ss_pred eecccCCcceEEEEeeECCCCCcEEEEEe-CCCeEEEEECCCCceeEEEec--CCcEEEEEECCCC-EEEEE-eCCCeEE
Q 016134 311 AYTHKEDNGVLALGGLNDPDGKPVLICAC-NDNTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK-LFFTG-DGAGMLG 385 (394)
Q Consensus 311 ~~~~~~~~~~~~~~~~~s~~g~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~-~l~tg-s~Dg~I~ 385 (394)
+... .-.....+ +++|....++++-. ....|...++..... ..+.. -...+.|++++++ .|+.+ +..+.|.
T Consensus 429 l~~~-~l~~P~~i--avdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 429 LISE-DLEEPRAI--VLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp EECT-TCCSEEEE--EEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEC-CCCCeeeE--EEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence 3221 11222222 24675332555542 236677777654332 23322 4568899999865 44444 4556788
Q ss_pred EEeCCCC
Q 016134 386 VWKLLAK 392 (394)
Q Consensus 386 vWd~~~~ 392 (394)
..+++-.
T Consensus 505 ~~~~dG~ 511 (619)
T 3s94_A 505 VMNTDGT 511 (619)
T ss_dssp EEESSSC
T ss_pred EEecCCC
Confidence 8877543
No 331
>3d2n_A Muscleblind-like protein 1; tandem zinc finger domain, alternative splicing, metal- binding, nucleus, RNA-binding, zinc, zinc-finger, metal binding; 2.70A {Homo sapiens}
Probab=90.97 E-value=0.029 Score=39.90 Aligned_cols=23 Identities=35% Similarity=0.976 Sum_probs=21.1
Q ss_pred CceeEEEeeeCccCCCCCccccc
Q 016134 36 NKVVCVYVLEGRCNRNPCRFAHT 58 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~h~ 58 (394)
.-.+|.+|..|+|.|-.|+|+|.
T Consensus 42 ~~~vC~dflkG~C~r~~C~y~H~ 64 (83)
T 3d2n_A 42 RVIACFDSLKGRCSRENCKYLHP 64 (83)
T ss_dssp EEECCHHHHTTCCCCSSCSSCCC
T ss_pred ceeehhHhhhccccCCCcceeCC
Confidence 35699999999999999999996
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.86 E-value=8.2 Score=34.17 Aligned_cols=107 Identities=10% Similarity=0.034 Sum_probs=54.8
Q ss_pred ecCCeEEEEeC------CCeEEEEeCCCCce--eEEEcCCCCCcEEEEEcCCEEEEEeCCC-----cEEEEEeCCCceee
Q 016134 243 VGRSRLCSGSM------DNTIRVWELDTLEP--VMTLNDHTDAPMSLLCWDQFLLSCSLDH-----TIKVWFATGRGNLE 309 (394)
Q Consensus 243 ~~~~~l~sgs~------Dg~V~iwd~~~~~~--~~~~~~h~~~v~~l~~~~~~l~s~s~Dg-----~i~vwd~~~~~~~~ 309 (394)
+.+.+++.|+. -..+.+||+.+.+= +..+......-.++.+.+.+++.|+.++ .+.+||+.+.+-..
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 44555666665 24688999887542 2112211122234444577777777654 57888887653222
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEEeCC--------------CeEEEEECCCCce
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICACND--------------NTVHLYELPSFME 354 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d--------------g~I~iwd~~~~~~ 354 (394)
+..........+.. .-+++ +++.|+.+ ..|.+||+.+.+-
T Consensus 227 -~~~~p~~r~~~~~~---~~~~~-l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 227 -FEAFPQERSSLSLV---SLVGT-LYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp -ECCCSSCCBSCEEE---EETTE-EEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred -CCCCCCcccceeEE---EECCE-EEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 22111111111111 11455 67767653 2477888877643
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=90.40 E-value=9.1 Score=33.92 Aligned_cols=107 Identities=7% Similarity=0.019 Sum_probs=53.4
Q ss_pred ecCCeEEEEeC------CCeEEEEeCCCCceeE--EEcCCCCCcEEEEEcCCEEEEEeCC-----CcEEEEEeCCCceee
Q 016134 243 VGRSRLCSGSM------DNTIRVWELDTLEPVM--TLNDHTDAPMSLLCWDQFLLSCSLD-----HTIKVWFATGRGNLE 309 (394)
Q Consensus 243 ~~~~~l~sgs~------Dg~V~iwd~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~D-----g~i~vwd~~~~~~~~ 309 (394)
..+.+++.|+. -..+.+||+.+.+-.. .+........++.+.+.+++.|+.+ ..+.+||+.+.+-..
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 34555566653 2458999998754221 1111112223344446777777643 346788887653222
Q ss_pred EeecccCCcceEEEEeeECCCCCcEEEEEeCC--------------CeEEEEECCCCce
Q 016134 310 AAYTHKEDNGVLALGGLNDPDGKPVLICACND--------------NTVHLYELPSFME 354 (394)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~d--------------g~I~iwd~~~~~~ 354 (394)
+..........+.. ..+++ +++.|+.+ ..+.+||+.+.+-
T Consensus 237 -~~~~p~~r~~~~~~---~~~~~-i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 237 -MTEFPQERSSISLV---SLAGS-LYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp -CCCCSSCCBSCEEE---EETTE-EEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred -CCCCCCcccceEEE---EECCE-EEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 11111111111111 12455 66766653 4578888887643
No 334
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=90.30 E-value=0.052 Score=39.97 Aligned_cols=24 Identities=25% Similarity=0.805 Sum_probs=19.7
Q ss_pred CCceeEEEeeeCccCCC-CCccccc
Q 016134 35 TNKVVCVYVLEGRCNRN-PCRFAHT 58 (394)
Q Consensus 35 ~~~~~~~~~~~~~~~~~-~~~~~h~ 58 (394)
....+|+||+.|.|++- .|+|.|.
T Consensus 11 ~k~~lC~~f~~G~C~~G~~C~f~H~ 35 (98)
T 2cqe_A 11 KKRELCKFYITGFCARAENCPYMHG 35 (98)
T ss_dssp CCCSBCTTTTTTCCSCSTTCSSBSS
T ss_pred CCCccCcccccCcCCCCCCCCCCCC
Confidence 35678999999999985 4999987
No 335
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.28 E-value=6.5 Score=42.88 Aligned_cols=134 Identities=7% Similarity=-0.005 Sum_probs=67.5
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEEcC-----CEEEEEeC---CCcEEEEEeCCC---c-----eeeEeecccCC
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCWD-----QFLLSCSL---DHTIKVWFATGR---G-----NLEAAYTHKED 317 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~---Dg~i~vwd~~~~---~-----~~~~~~~~~~~ 317 (394)
.|.+.+|..+. +..+.+++|......+...+ .++..+.. .+++.|-++... . ....+......
T Consensus 178 ~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 178 VGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred cceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 46788887764 34455666665554444431 12222221 267888887543 0 01111111111
Q ss_pred cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEEec-CCcEEEEEECCC-CEEEEEeCCCeEEEEeC
Q 016134 318 NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRIFS-KHEVRVIEIGPD-KLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 318 ~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~~~v~~l~~sp~-~~l~tgs~Dg~I~vWd~ 389 (394)
..-..+....++... ++..-+.-|.|++||+.++..+..-.- ...|...+-... +-++.....|.|.--.+
T Consensus 257 ~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v 329 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (1630)
T ss_pred ccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEE
Confidence 122222223355555 666677889999999999877654333 344444443332 23333335555544433
No 336
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.66 E-value=12 Score=33.99 Aligned_cols=201 Identities=9% Similarity=0.098 Sum_probs=102.4
Q ss_pred ecccCCCeEEEEecCCCCEEEEEe-CCCce--eecCCCcEEEecCCCCcEEEEEEcCCEEEEEecCCCCCCEEEEEe---
Q 016134 170 LEGHEKAVSGIALPLRSDKLFSGS-RDGTA--WNIESSAEFSLDGPVGEVYSMVVANEMLFAGAQDGHTRPVTCLAV--- 243 (394)
Q Consensus 170 l~~h~~~V~~l~~s~~~~~l~sgs-~Dg~v--Wd~~~~~~~~~~~~~~~v~~l~~~~~~l~~~~~~~h~~~V~~l~~--- 243 (394)
+....---.+++|++....|+.++ ..++| ||...+....+.-. ... ........+..|.|
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~-~~s-------------~~g~~~~~~sGl~~~~~ 73 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVID-GAS-------------SNGDGEQQMSGLSLLTH 73 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCT-TTC-------------CSSCCSEEEEEEEESSS
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecC-Ccc-------------ccCCCcceeeEEEEecc
Confidence 334444556788987555555555 67886 88765544332110 000 00000112345555
Q ss_pred c-CC-eEEEEe-------------CCCeEEEEeCC---CCceeEEEcC--C-----------CCCcEEEEEc--CCEEEE
Q 016134 244 G-RS-RLCSGS-------------MDNTIRVWELD---TLEPVMTLND--H-----------TDAPMSLLCW--DQFLLS 290 (394)
Q Consensus 244 ~-~~-~l~sgs-------------~Dg~V~iwd~~---~~~~~~~~~~--h-----------~~~v~~l~~~--~~~l~s 290 (394)
+ .+ ++++.. .+..|..||+. +++.+..... . ......++.+ |+..++
T Consensus 74 D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt 153 (334)
T 2p9w_A 74 DNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA 153 (334)
T ss_dssp SSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE
T ss_pred CCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe
Confidence 3 22 333222 26789999999 7776654431 1 1236677777 777777
Q ss_pred EeCC-CcEEEEEeCCCceeeEeecccCC----cceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce--eEEEe-c--
Q 016134 291 CSLD-HTIKVWFATGRGNLEAAYTHKED----NGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME--RGRIF-S-- 360 (394)
Q Consensus 291 ~s~D-g~i~vwd~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~--~~~~~-~-- 360 (394)
++.- +.|...+... +.+..+...... .....+ .++|++. +|++....+.|..+|+..... +.... .
T Consensus 154 ~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGI--v~~pdg~-~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~ 229 (334)
T 2p9w_A 154 FALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGI--TFDPHSN-KLIAFGGPRALTAFDVSKPYAWPEPVKINGDF 229 (334)
T ss_dssp EEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEE--EEETTTT-EEEEESSSSSEEEEECSSSSCCCEECEESSCC
T ss_pred CCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceE--EEeCCCC-EEEEEcCCCeEEEEcCCCCcceeecccccCCc
Confidence 7777 7766665432 233322211111 111122 3589998 555555599999999885432 21110 1
Q ss_pred --CCcEEE-EEECCCC--EEEEEeCCCeEEEEe
Q 016134 361 --KHEVRV-IEIGPDK--LFFTGDGAGMLGVWK 388 (394)
Q Consensus 361 --~~~v~~-l~~sp~~--~l~tgs~Dg~I~vWd 388 (394)
-..... +..-.+| +|++....+.+.+.+
T Consensus 230 ~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 230 GTLSGTEKIVTVPVGNESVLVGARAPYAISFRS 262 (334)
T ss_dssp CCCTTEEEEEEEEETTEEEEEEEETTEEEEEEC
T ss_pred ccccCcccccccccCCEEEEEEcCCCCEEEEEC
Confidence 112333 2333355 466666666555543
No 337
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=89.28 E-value=1.7 Score=39.68 Aligned_cols=115 Identities=7% Similarity=-0.072 Sum_probs=71.2
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEcCC-CCCcEEEEEc----CCEEEEE--eCCCcEEEEEeCCCceeeEeecccC-
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLNDH-TDAPMSLLCW----DQFLLSC--SLDHTIKVWFATGRGNLEAAYTHKE- 316 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h-~~~v~~l~~~----~~~l~s~--s~Dg~i~vwd~~~~~~~~~~~~~~~- 316 (394)
+++++.++.||.|.-+|.++|+.+-+++.. ..++....-. +..++.. ..||.|..+|..++.....+.....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 467899999999999999999999888753 1333332211 2234443 5899999999877643332221110
Q ss_pred CcceEEEEe--eE-CC----CCCcEEEEEeCCCeEEEEECCCCceeEEEec
Q 016134 317 DNGVLALGG--LN-DP----DGKPVLICACNDNTVHLYELPSFMERGRIFS 360 (394)
Q Consensus 317 ~~~~~~~~~--~~-s~----~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~ 360 (394)
....+.... .. .+ .+. .+.+|+.++.+.-.|+.+++.+..+..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCE-EEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCCCcEEEEEec
Confidence 000011000 00 00 223 678899999999999999988877764
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.19 E-value=17 Score=36.65 Aligned_cols=143 Identities=10% Similarity=0.063 Sum_probs=72.7
Q ss_pred cCCeEEEEeCC------CeEEEEeCCCCc--eeEEEcCCCCCcEEEEE-cCCEEEEEeCCC--cEEEEEeCCCceeeEee
Q 016134 244 GRSRLCSGSMD------NTIRVWELDTLE--PVMTLNDHTDAPMSLLC-WDQFLLSCSLDH--TIKVWFATGRGNLEAAY 312 (394)
Q Consensus 244 ~~~~l~sgs~D------g~V~iwd~~~~~--~~~~~~~h~~~v~~l~~-~~~~l~s~s~Dg--~i~vwd~~~~~~~~~~~ 312 (394)
++.+++.|+.+ ..+.+||+.+.+ .+..+......-.++.+ .+.+++.|+.++ .+.+||..+.+-.....
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 44555565543 357889988743 22222211222233443 477777777654 68999987654222111
Q ss_pred ---c--ccCCcceEEEEeeECCC-CCcEEEEEeC--C-----CeEEEEECCCCce-----eEEEe----c-CCcEEEEEE
Q 016134 313 ---T--HKEDNGVLALGGLNDPD-GKPVLICACN--D-----NTVHLYELPSFME-----RGRIF----S-KHEVRVIEI 369 (394)
Q Consensus 313 ---~--~~~~~~~~~~~~~~s~~-g~~~l~sgs~--d-----g~I~iwd~~~~~~-----~~~~~----~-~~~v~~l~~ 369 (394)
. ......... +..+ ++ +++.|+. + ..+.+||+.+... ...+. . .....++ .
T Consensus 531 ~g~~p~~r~~~~a~v----~~~~~~~-iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~ 604 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLE----FDPVSKQ-GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-Y 604 (695)
T ss_dssp SSGGGGSCCBSCEEE----EETTTTE-EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-E
T ss_pred CCCCCCcccceeEEE----EeCCCCE-EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-E
Confidence 0 111111122 2333 55 7777765 2 4689999988761 12221 1 1112233 3
Q ss_pred CCCC-EEEEEeC--------CCeEEEEeCCCC
Q 016134 370 GPDK-LFFTGDG--------AGMLGVWKLLAK 392 (394)
Q Consensus 370 sp~~-~l~tgs~--------Dg~I~vWd~~~~ 392 (394)
..++ +++.|+. ...|.+||+.+.
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 3325 6666663 345888887653
No 339
>2rhk_C Cleavage and polyadenylation specificity factor subunit 4; influenza A, nonstructural protein, viral protein: HOST complex, Zn finger; 1.95A {Homo sapiens}
Probab=86.11 E-value=0.11 Score=35.70 Aligned_cols=26 Identities=23% Similarity=0.706 Sum_probs=22.4
Q ss_pred CceeEEEeee-CccCCCCCccccccCC
Q 016134 36 NKVVCVYVLE-GRCNRNPCRFAHTESS 61 (394)
Q Consensus 36 ~~~~~~~~~~-~~~~~~~~~~~h~~~p 61 (394)
...+|+||.. |.|.+-.|+|.|...+
T Consensus 43 ~~~~C~~f~~~G~C~~~~C~y~H~~p~ 69 (72)
T 2rhk_C 43 KMSECYFYSKFGECSNKECPFLHIDPE 69 (72)
T ss_dssp SCCBCHHHHHHSCCSBTTCCSBCCCCC
T ss_pred cCCcccccCCCCCCCCCCeeccCCCcc
Confidence 3458999999 9999999999998654
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=85.04 E-value=1 Score=41.20 Aligned_cols=106 Identities=8% Similarity=0.099 Sum_probs=63.9
Q ss_pred CCEEEEEeCCCcEEEEEeCCCceeeEeecccCCcceEEEEeeECC-CCCcEEEEE-eCCCeEEEEECCCCceeEEEec--
Q 016134 285 DQFLLSCSLDHTIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP-DGKPVLICA-CNDNTVHLYELPSFMERGRIFS-- 360 (394)
Q Consensus 285 ~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~-- 360 (394)
+.+++.++.||.|.-+|..+++.+-.+... .....+.....-.+ ++. +++.. ..||.|..++..++.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~-~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYE-TLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSE-EEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCc-EEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 457889999999999999888777666543 11122221100011 223 44443 5899999999988855544432
Q ss_pred ---CCcEEE---EEE------CCCCEEEEEeCCCeEEEEeCCCC
Q 016134 361 ---KHEVRV---IEI------GPDKLFFTGDGAGMLGVWKLLAK 392 (394)
Q Consensus 361 ---~~~v~~---l~~------sp~~~l~tgs~Dg~I~vWd~~~~ 392 (394)
..++.. ..+ +.++.+++|+.+|.+...|+.+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC
Confidence 112221 001 13458888999998888887764
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=84.96 E-value=14 Score=33.23 Aligned_cols=63 Identities=5% Similarity=-0.007 Sum_probs=33.1
Q ss_pred cCCeEEEEeC-CCeEEEEeCCCC-ceeEEEcC----CCCCcEEEEEcCCEEEEEeC-C---------CcEEEEEeCCCc
Q 016134 244 GRSRLCSGSM-DNTIRVWELDTL-EPVMTLND----HTDAPMSLLCWDQFLLSCSL-D---------HTIKVWFATGRG 306 (394)
Q Consensus 244 ~~~~l~sgs~-Dg~V~iwd~~~~-~~~~~~~~----h~~~v~~l~~~~~~l~s~s~-D---------g~i~vwd~~~~~ 306 (394)
.+.+++.|+. ...+.+||+.+. ..-..+.. ....-..+.+.+.+++.|+. + ..+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 4555555553 357889998641 12222221 11122333344666666665 2 468889987653
No 342
>2d9n_A Cleavage and polyadenylation specificity factor, 30 kDa subunit; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.45 E-value=0.17 Score=35.38 Aligned_cols=26 Identities=27% Similarity=0.714 Sum_probs=22.5
Q ss_pred ceeEEEeee-CccCCCCCccccccCCC
Q 016134 37 KVVCVYVLE-GRCNRNPCRFAHTESSS 62 (394)
Q Consensus 37 ~~~~~~~~~-~~~~~~~~~~~h~~~p~ 62 (394)
..+|+||.. |.|....|+|+|...+.
T Consensus 38 ~~~C~~f~~~G~C~~~~C~f~H~~~~~ 64 (77)
T 2d9n_A 38 MPECYFYSKFGECSNKECPFLHIDPES 64 (77)
T ss_dssp SCBCHHHHHTCCCCCSSCSSBCCCTTS
T ss_pred CCCCcccCCCCccCCCCeeccCCCccc
Confidence 358999999 99999999999987553
No 343
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=84.34 E-value=21 Score=31.33 Aligned_cols=26 Identities=8% Similarity=0.008 Sum_probs=14.6
Q ss_pred CcEEEEEcCCEEEEEeCCCcEEEEEeC
Q 016134 277 APMSLLCWDQFLLSCSLDHTIKVWFAT 303 (394)
Q Consensus 277 ~v~~l~~~~~~l~s~s~Dg~i~vwd~~ 303 (394)
.|..++.-..+.+.-. |+.|..|-..
T Consensus 103 ~v~~ia~G~~hs~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 103 GVDAIAAGAWASYALK-DGKVIAWGDD 128 (282)
T ss_dssp SEEEEEEETTEEEEEE-TTEEEEEECC
T ss_pred CeEEEECcCCEEEEEe-CCeEEEecCC
Confidence 4555555545444444 6666666543
No 344
>3u1l_A PRE-mRNA-splicing factor CWC2; CSMP, zinc finger; 1.64A {Saccharomyces cerevisiae} PDB: 3u1m_A 3tp2_A
Probab=82.66 E-value=0.13 Score=44.58 Aligned_cols=27 Identities=19% Similarity=0.568 Sum_probs=22.6
Q ss_pred CceeEEEeeeCccCC-CCCccccccCCCc
Q 016134 36 NKVVCVYVLEGRCNR-NPCRFAHTESSSL 63 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~h~~~p~~ 63 (394)
.+..|.||+.|-|.| .-|+|+|. +|.+
T Consensus 69 ~~~~C~ffakG~C~~G~~C~y~H~-lPt~ 96 (240)
T 3u1l_A 69 QLFFCLFFAKGMCCLGPKCEYLHH-IPDE 96 (240)
T ss_dssp CCSBCHHHHTTCCSCGGGCSSBBS-CCCH
T ss_pred CCeEcCccccCCCCCCCCCCccCC-CCCc
Confidence 466999999999999 77999996 5554
No 345
>1m9o_A Tristetraproline; Cys3His type zinc finger, metal binding protein; NMR {Mus musculus} SCOP: g.66.1.1 PDB: 1rgo_A
Probab=82.33 E-value=0.42 Score=33.20 Aligned_cols=27 Identities=30% Similarity=0.597 Sum_probs=22.6
Q ss_pred CCceeEEEe-eeCccCC-CCCccccccCC
Q 016134 35 TNKVVCVYV-LEGRCNR-NPCRFAHTESS 61 (394)
Q Consensus 35 ~~~~~~~~~-~~~~~~~-~~~~~~h~~~p 61 (394)
....+|.|| +.|.|.+ ..|+|+|.+..
T Consensus 10 ~kt~~C~~f~~~G~C~~G~~C~f~H~~~e 38 (77)
T 1m9o_A 10 YKTELCRTYSESGRCRYGAKCQFAHGLGE 38 (77)
T ss_dssp CCSCCCSGGGGTSCCTTTTTCSSCSSSCC
T ss_pred ccchhCHHhhhCCCcCCCCCccCCCCChh
Confidence 367899999 5999997 89999998644
No 346
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.22 E-value=27 Score=31.73 Aligned_cols=98 Identities=19% Similarity=0.157 Sum_probs=53.3
Q ss_pred CCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeEeec----ccCCcceEEEEeeECCC---CCcEEEEEeC---C--
Q 016134 275 TDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEAAYT----HKEDNGVLALGGLNDPD---GKPVLICACN---D-- 341 (394)
Q Consensus 275 ~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~s~~---g~~~l~sgs~---d-- 341 (394)
-.....|++. +..|+.+..++.|+++|. +++ ..+.. ......... +.++|+ +..++++-.. +
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~--~~~~~~~v~~~g~~g~~g--ia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISP-SGK--KLVASFDVANVGEAGLLG--LALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECS-SCE--EEEEECCCCCSTTCSEEE--EEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc--eEeeccceeecCCCceee--EEeCCCCCcCCEEEEEEeccCCCCC
Confidence 3456788887 445666677799998873 343 22211 111122333 346886 3425555442 3
Q ss_pred --CeEEEEECCCC--c-----ee-EEEec--CCcEEEEEECCCC-EEEE
Q 016134 342 --NTVHLYELPSF--M-----ER-GRIFS--KHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 342 --g~I~iwd~~~~--~-----~~-~~~~~--~~~v~~l~~sp~~-~l~t 377 (394)
..|..|+.... . .+ ..+.. .+....|+|.||| ++++
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 56777877654 1 11 11221 3456789999999 4444
No 347
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=81.87 E-value=30 Score=31.38 Aligned_cols=69 Identities=7% Similarity=-0.043 Sum_probs=41.2
Q ss_pred CCEEEEEec-CCeEEEEeCCCeEEEEeCCCCc-eeEEEc---CCCCCcEEEEEcC-----CEEEEEeC----C----CcE
Q 016134 236 RPVTCLAVG-RSRLCSGSMDNTIRVWELDTLE-PVMTLN---DHTDAPMSLLCWD-----QFLLSCSL----D----HTI 297 (394)
Q Consensus 236 ~~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~-~~~~~~---~h~~~v~~l~~~~-----~~l~s~s~----D----g~i 297 (394)
.....|+|. ...|+++..++.|+++|. +++ .+..+. ........|+++. ..|+.+.. + ..|
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 345677776 345666677799999974 444 222221 1234578899883 35555443 2 567
Q ss_pred EEEEeCCC
Q 016134 298 KVWFATGR 305 (394)
Q Consensus 298 ~vwd~~~~ 305 (394)
..|+....
T Consensus 108 ~r~~~~~~ 115 (354)
T 3a9g_A 108 IRGRLDGS 115 (354)
T ss_dssp EEEEECSS
T ss_pred EEEEECCC
Confidence 77777543
No 348
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=81.34 E-value=31 Score=31.19 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=39.1
Q ss_pred CEEEEEec-CCeEEEEeCCCeEEEEeCCCCce--eEEEc---CCCCCcEEEEEcC-----CEEEEEeCC------CcEEE
Q 016134 237 PVTCLAVG-RSRLCSGSMDNTIRVWELDTLEP--VMTLN---DHTDAPMSLLCWD-----QFLLSCSLD------HTIKV 299 (394)
Q Consensus 237 ~V~~l~~~-~~~l~sgs~Dg~V~iwd~~~~~~--~~~~~---~h~~~v~~l~~~~-----~~l~s~s~D------g~i~v 299 (394)
.-..|+|. ...|+++..++.|++++ .++. +..+. ........|+++. ..|+.+... ..|..
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 45677776 23355566779999998 3332 22222 1234678899984 355554432 57888
Q ss_pred EEeCC
Q 016134 300 WFATG 304 (394)
Q Consensus 300 wd~~~ 304 (394)
++...
T Consensus 110 ~~~~~ 114 (352)
T 2ism_A 110 LRHLG 114 (352)
T ss_dssp EEECS
T ss_pred EEeCC
Confidence 88764
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=81.24 E-value=4.7 Score=39.37 Aligned_cols=91 Identities=11% Similarity=-0.008 Sum_probs=62.8
Q ss_pred cEEEEEeCC----C-ceeeEeecccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCce-------------eEE
Q 016134 296 TIKVWFATG----R-GNLEAAYTHKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFME-------------RGR 357 (394)
Q Consensus 296 ~i~vwd~~~----~-~~~~~~~~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~-------------~~~ 357 (394)
.+.+.|.+. . .....+...+.++.+. .+|||++++++|-.+.++.++|++.... ..+
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~-----vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae 373 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCN-----TSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE 373 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEE-----ECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCccee-----eCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee
Confidence 478888876 2 2333344444444433 3899998888888899999999885211 222
Q ss_pred EecCCcEEEEEECCCC-EEEEEeCCCeEEEEeCCC
Q 016134 358 IFSKHEVRVIEIGPDK-LFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 358 ~~~~~~v~~l~~sp~~-~l~tgs~Dg~I~vWd~~~ 391 (394)
....-.....+|.++| ...|---|.+|.-|++..
T Consensus 374 ~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 374 PELGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred ccCCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 2335568889999999 555556899999999864
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.20 E-value=10 Score=38.22 Aligned_cols=70 Identities=9% Similarity=0.146 Sum_probs=48.4
Q ss_pred CCEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEcCCCC-------------CcEEEEEcCCEEEEEe--CCCcEEEE
Q 016134 236 RPVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLNDHTD-------------APMSLLCWDQFLLSCS--LDHTIKVW 300 (394)
Q Consensus 236 ~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~~h~~-------------~v~~l~~~~~~l~s~s--~Dg~i~vw 300 (394)
..|.++.+...++++-+.|.++|+||+++++++.+..-... +-.-+...+.++++=+ ..|..++|
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~ 301 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMG 301 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEE
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEE
Confidence 45777788888999999999999999999998877643111 1111222255666544 56799999
Q ss_pred EeCCC
Q 016134 301 FATGR 305 (394)
Q Consensus 301 d~~~~ 305 (394)
.+...
T Consensus 302 ~l~~~ 306 (729)
T 3f7f_A 302 TLLVD 306 (729)
T ss_dssp EEEC-
T ss_pred EEEEc
Confidence 88643
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.05 E-value=53 Score=33.07 Aligned_cols=146 Identities=11% Similarity=0.125 Sum_probs=81.3
Q ss_pred CEEEEEecCCeEEEEeCCCeEEEEeCCCCceeEEEc-----CCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCceeeE
Q 016134 237 PVTCLAVGRSRLCSGSMDNTIRVWELDTLEPVMTLN-----DHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNLEA 310 (394)
Q Consensus 237 ~V~~l~~~~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-----~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~~~ 310 (394)
.|.++......|..++.+ -|..||..+.+.. .+. .....|.++... ...|..+..+ -|..+|..+.+.. .
T Consensus 104 ~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~-~ 179 (758)
T 3ott_A 104 DVRTMALQGDTLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFE-G 179 (758)
T ss_dssp CEEEEEEETTEEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEE-E
T ss_pred eEEEEEecCCcEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceE-E
Confidence 466665555667777766 6888998765543 331 123467787776 4455556654 4777887654322 2
Q ss_pred eecccC----CcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEEE-ecCCcEEEEEECCCCEEEEEeCCCeEE
Q 016134 311 AYTHKE----DNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGRI-FSKHEVRVIEIGPDKLFFTGDGAGMLG 385 (394)
Q Consensus 311 ~~~~~~----~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~-~~~~~v~~l~~sp~~~l~tgs~Dg~I~ 385 (394)
+..... ...+.++ ..++++. .|..|.. +-|..+|..+.+..... .....|.++....++.|..|+.+ -|.
T Consensus 180 ~~~~~~~~~~~~~i~~i--~~d~~~~-~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~ 254 (758)
T 3ott_A 180 IPLPVHSSQSNLFVNSL--LEDTTRQ-CVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLY 254 (758)
T ss_dssp ECCCCCTTCSSCCEEEE--EEETTTT-EEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEE
T ss_pred ecCCCccccccceeEEE--EEECCCC-EEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-cee
Confidence 111110 1112333 2345555 3333443 46888998776432211 11345888888888866666654 477
Q ss_pred EEeCCC
Q 016134 386 VWKLLA 391 (394)
Q Consensus 386 vWd~~~ 391 (394)
+++..+
T Consensus 255 ~~~~~~ 260 (758)
T 3ott_A 255 VYHNDT 260 (758)
T ss_dssp EECCTT
T ss_pred EEecCC
Confidence 776543
No 352
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=79.40 E-value=32 Score=31.13 Aligned_cols=97 Identities=21% Similarity=0.175 Sum_probs=53.4
Q ss_pred CCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecc----cCCcceEEEEeeECCC---CCcEEEEEeCC----
Q 016134 275 TDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTH----KEDNGVLALGGLNDPD---GKPVLICACND---- 341 (394)
Q Consensus 275 ~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~----~~~~~~~~~~~~~s~~---g~~~l~sgs~d---- 341 (394)
-.....+++. +. |+.+..++.|++++ .++ ...+... ....... .++++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG~-l~V~e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~--gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIAERPGRIRLFR--EGR-LSTYAELSVYHRGESGLL--GLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CSCEEEEEECTTSC-EEEEETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEE--EEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCceEEEEcCCCe-EEEEeCCCeEEEEE--CCC-ccEeecceEeecCCCCce--eEEECCCCCCCCEEEEEEecCCCCC
Confidence 3456788887 55 55556779999998 333 2211111 1112233 3346887 44355554433
Q ss_pred -CeEEEEECCCCc-----eeE-EEe--c--CCcEEEEEECCCC-EEEE
Q 016134 342 -NTVHLYELPSFM-----ERG-RIF--S--KHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 342 -g~I~iwd~~~~~-----~~~-~~~--~--~~~v~~l~~sp~~-~l~t 377 (394)
+.|..|+..... .+. .+. . .+....++|.||| ++++
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 678888876431 111 132 1 2446789999999 4443
No 353
>2cqe_A KIAA1064 protein; CCCH zinc-finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.66.1.1 g.66.1.1
Probab=74.37 E-value=0.62 Score=34.12 Aligned_cols=28 Identities=21% Similarity=0.524 Sum_probs=23.1
Q ss_pred CCCceeEEEe-eeCccCC-CCCccccccCC
Q 016134 34 PTNKVVCVYV-LEGRCNR-NPCRFAHTESS 61 (394)
Q Consensus 34 ~~~~~~~~~~-~~~~~~~-~~~~~~h~~~p 61 (394)
.+...+|+|| +.|.|.+ ..|+|.|..++
T Consensus 33 ~H~~~~C~~f~~~G~C~~G~~C~f~H~~~~ 62 (98)
T 2cqe_A 33 MHGDFPCKLYHTTGNCINGDDCMFSHDPLT 62 (98)
T ss_dssp BSSSSBCSHHHHTSCCSSCTTCSSBCCCCC
T ss_pred CCCCCcCcCcccCCcCCCCCCCcccCCCCc
Confidence 3346799999 5999998 99999998654
No 354
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=68.72 E-value=43 Score=28.44 Aligned_cols=132 Identities=11% Similarity=-0.029 Sum_probs=67.3
Q ss_pred CeEEEEeCCCeEEEEeCCCCc------eeEEEcC-CCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCCcee-----eEee
Q 016134 246 SRLCSGSMDNTIRVWELDTLE------PVMTLND-HTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGRGNL-----EAAY 312 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~~------~~~~~~~-h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~~~~-----~~~~ 312 (394)
.+|+....| +|+.=-..+.. ...++-. --..+..++|+ +..|... .++.+.-.+..+.... .+..
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~I 82 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKI 82 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEE
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEe
Confidence 346666666 55554443333 1223321 12367789998 3334444 5676554443321110 1111
Q ss_pred cccCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCcee-----EEEec---CCcEEEEEECCCCEEEEEeCCCeE
Q 016134 313 THKEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMER-----GRIFS---KHEVRVIEIGPDKLFFTGDGAGML 384 (394)
Q Consensus 313 ~~~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~-----~~~~~---~~~v~~l~~sp~~~l~tgs~Dg~I 384 (394)
.......-. .+.|+|+|. +.++ .||.|+-++-++...- ..... -..+..|.+.|+|.|.... |+.+
T Consensus 83 G~~Gw~~F~--a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~l 156 (236)
T 1tl2_A 83 GNGGWNQFQ--FLFFDPNGY-LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQF 156 (236)
T ss_dssp ECSCGGGCS--EEEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEE
T ss_pred cccccccce--EEEECCCCC-EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcE
Confidence 000000101 234699998 5555 5698987776542111 11111 2468999999999665665 8875
Q ss_pred E
Q 016134 385 G 385 (394)
Q Consensus 385 ~ 385 (394)
.
T Consensus 157 y 157 (236)
T 1tl2_A 157 Y 157 (236)
T ss_dssp E
T ss_pred E
Confidence 4
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=68.60 E-value=60 Score=33.98 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=26.5
Q ss_pred ECCCCCcEEEEEeCCCeEEEEECCCCceeEEEe
Q 016134 327 NDPDGKPVLICACNDNTVHLYELPSFMERGRIF 359 (394)
Q Consensus 327 ~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 359 (394)
..++.. ++++-+.|+++|||++.+++++....
T Consensus 243 ~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 243 FLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 455555 89999999999999999998887654
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=67.87 E-value=61 Score=28.19 Aligned_cols=143 Identities=15% Similarity=0.098 Sum_probs=76.7
Q ss_pred CCEEEEEecCCeEEEEeCCCeEEEEeCCC-CceeEEEcCCCCCcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeecc
Q 016134 236 RPVTCLAVGRSRLCSGSMDNTIRVWELDT-LEPVMTLNDHTDAPMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYTH 314 (394)
Q Consensus 236 ~~V~~l~~~~~~l~sgs~Dg~V~iwd~~~-~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~ 314 (394)
..|..|+......+.-. ||.|..|-... +++-.. ......|..++.-..+.+.-. |+.|..|-......+..-...
T Consensus 102 ~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~p~~~ 178 (282)
T 3qhy_B 102 SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTVPAEA 178 (282)
T ss_dssp SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGG
T ss_pred CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCCceec
Confidence 35666666655555555 89999997644 222111 112345777776655544445 799999976543322211111
Q ss_pred cCCcceEEEEeeECCCCCcEEEEEeCCCeEEEEECCCCceeEE-EecCCcEEEEEECCCCEEEEEeCCCeEEEEeCCC
Q 016134 315 KEDNGVLALGGLNDPDGKPVLICACNDNTVHLYELPSFMERGR-IFSKHEVRVIEIGPDKLFFTGDGAGMLGVWKLLA 391 (394)
Q Consensus 315 ~~~~~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~-~~~~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~~~ 391 (394)
...+..+.. .....++. .||.|+.|-......+.. ......|..|+......++.. ||.|..|=...
T Consensus 179 --~~~v~~i~~----G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 179 --QSGVDDVAG----GIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSR 246 (282)
T ss_dssp --GSSEEEEEE----CSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTC
T ss_pred --CCCeEEEEe----cCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCC
Confidence 122333321 12223333 589999997655422221 111345777776666544444 89999886544
No 357
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=64.77 E-value=60 Score=29.27 Aligned_cols=95 Identities=16% Similarity=0.200 Sum_probs=48.4
Q ss_pred CCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeecc-----cCCcceEEEEeeECCC---CCcEEEEEeC-----
Q 016134 276 DAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYTH-----KEDNGVLALGGLNDPD---GKPVLICACN----- 340 (394)
Q Consensus 276 ~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~s~~---g~~~l~sgs~----- 340 (394)
.....|+|. +..|+.+...+.|++++.. +.....+... ....... .+.++|+ +..+.++-..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~--gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLL--DVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEE--EEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCce--eEEECCCCCCCCEEEEEEeCCCCCC
Confidence 346788887 5525566678999998843 2221111111 1112223 3346885 3325555332
Q ss_pred --CCeEEEEECCCC----ceeEEEe-c-------CCcEEEEEECCCC
Q 016134 341 --DNTVHLYELPSF----MERGRIF-S-------KHEVRVIEIGPDK 373 (394)
Q Consensus 341 --dg~I~iwd~~~~----~~~~~~~-~-------~~~v~~l~~sp~~ 373 (394)
...|..|++... .....+. . .|....|+|.|||
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG 141 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG 141 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC
Confidence 235666666533 1111221 1 2446789999999
No 358
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=57.95 E-value=11 Score=32.07 Aligned_cols=61 Identities=10% Similarity=0.083 Sum_probs=36.4
Q ss_pred eeECCCCCcEEEEEeCCCeEEEEECCCCce------eEEEec--CCcEEEEEECCCCEEEEEeCCCeEEEEeC
Q 016134 325 GLNDPDGKPVLICACNDNTVHLYELPSFME------RGRIFS--KHEVRVIEIGPDKLFFTGDGAGMLGVWKL 389 (394)
Q Consensus 325 ~~~s~~g~~~l~sgs~dg~I~iwd~~~~~~------~~~~~~--~~~v~~l~~sp~~~l~tgs~Dg~I~vWd~ 389 (394)
++|+|+|. +.++ .++.++-.+..+... -..+-. -..-.++.|.|+|.|... .||.|.-++-
T Consensus 46 laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 46 LFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP 114 (236)
T ss_dssp EEECTTSC-EEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred EEECCCcc-EEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence 34699998 6655 677777666654211 111111 111378899999944444 6698876664
No 359
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=54.80 E-value=6.2 Score=20.37 Aligned_cols=18 Identities=39% Similarity=0.573 Sum_probs=9.2
Q ss_pred CCCCCCCCCCCceeEEEe
Q 016134 26 GGGVGGGWPTNKVVCVYV 43 (394)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~ 43 (394)
|||.|+|-...+.|---|
T Consensus 2 gggggggaashqrvtpdw 19 (29)
T 1cn3_F 2 GGGGGGGAASHQRVTPDW 19 (29)
T ss_dssp CCCCCSTTTCCCCCEEGG
T ss_pred CCCCCCccccccccCchh
Confidence 344455555555554444
No 360
>2d9m_A Zinc finger CCCH-type domain containing protein 7A; CCCH zinc-finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.85 E-value=1.7 Score=29.20 Aligned_cols=24 Identities=33% Similarity=0.802 Sum_probs=21.3
Q ss_pred CceeEEEeeeCccCC-CCCcccccc
Q 016134 36 NKVVCVYVLEGRCNR-NPCRFAHTE 59 (394)
Q Consensus 36 ~~~~~~~~~~~~~~~-~~~~~~h~~ 59 (394)
+-..|.+|..|.|.. .-|.|.|.+
T Consensus 19 k~~LC~~~~~G~C~~G~~C~FAHG~ 43 (69)
T 2d9m_A 19 YFSICDRYMNGTCPEGNSCKFAHGN 43 (69)
T ss_dssp CCSBCHHHHHSCCSSCSSCSSBSSH
T ss_pred CcccCcccCcCCCCCCCccCCcCCH
Confidence 347999999999999 899999985
No 361
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.77 E-value=19 Score=36.28 Aligned_cols=37 Identities=14% Similarity=0.204 Sum_probs=30.5
Q ss_pred CcEEEEEcCCEEEEEeCCCcEEEEEeCCCceeeEeec
Q 016134 277 APMSLLCWDQFLLSCSLDHTIKVWFATGRGNLEAAYT 313 (394)
Q Consensus 277 ~v~~l~~~~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~ 313 (394)
.|.++.+...++++-+.|.++|+||+.+++++....-
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666677788999999999999999999887766544
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.41 E-value=60 Score=34.73 Aligned_cols=31 Identities=16% Similarity=0.055 Sum_probs=26.0
Q ss_pred CCCCCcEEEEEeCCCeEEEEECCCCceeEEEe
Q 016134 328 DPDGKPVLICACNDNTVHLYELPSFMERGRIF 359 (394)
Q Consensus 328 s~~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 359 (394)
.++.. ++++-+.|+++|||++.+++++.+..
T Consensus 246 ~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 246 LSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp ETTTT-EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cCCcc-EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45555 89999999999999999998877754
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=49.41 E-value=61 Score=33.89 Aligned_cols=37 Identities=22% Similarity=0.231 Sum_probs=28.7
Q ss_pred CCEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 236 RPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 236 ~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
..+.++... ..++++-+.|+++|||++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 345555554 4588899999999999999999887753
No 364
>3u85_B Histone-lysine N-methyltransferase MLL; menin, MEN1, JUND, ledgf, TPR, transcription, epigeneti cancer; 3.00A {Homo sapiens}
Probab=49.28 E-value=9.6 Score=18.49 Aligned_cols=14 Identities=43% Similarity=0.707 Sum_probs=6.1
Q ss_pred ccCCCCCCCCCCCC
Q 016134 20 PINGQAGGGVGGGW 33 (394)
Q Consensus 20 ~~~~~~~~~~~~~~ 33 (394)
|+-++.+++.|+|+
T Consensus 6 parpg~s~~sg~g~ 19 (21)
T 3u85_B 6 PARPGTTGGGGGGG 19 (26)
T ss_pred ccCCCcccCCCccc
Confidence 44444444444443
No 365
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=48.28 E-value=1.4e+02 Score=26.15 Aligned_cols=111 Identities=9% Similarity=0.000 Sum_probs=58.0
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEEcCCEEEEEe--CCC--cEEEEEeCCCceeeEeecccCCcceEEEEeeECC
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCWDQFLLSCS--LDH--TIKVWFATGRGNLEAAYTHKEDNGVLALGGLNDP 329 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s--~Dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 329 (394)
+..|+..++...+... +.. .....+...++.|+-.. .++ .|..-++.. .....+..+.. . .+++
T Consensus 87 ~~~Iy~i~~dg~~~~~-l~~--~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~----~----~~~~ 154 (302)
T 3s25_A 87 RNSLCRIKRNGHGSTV-LDP--DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL----F----TCNT 154 (302)
T ss_dssp SEEEEEEETTSCCCEE-EEC--SCEEEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC----C----CSEE
T ss_pred CCeEEEEeCCCCcceE-eec--CCccEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc----e----EeeE
Confidence 3467888887665332 322 23345555688877765 344 444445542 23333332221 1 1356
Q ss_pred CCCcEEEEEeCCCeEEEEECCCCceeEEEecCCcEEEEEECCCC-EEEEEe
Q 016134 330 DGKPVLICACNDNTVHLYELPSFMERGRIFSKHEVRVIEIGPDK-LFFTGD 379 (394)
Q Consensus 330 ~g~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~v~~l~~sp~~-~l~tgs 379 (394)
+++.+..+......|...++........+. .... ..+.|++ .|+-..
T Consensus 155 ~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~ 202 (302)
T 3s25_A 155 SDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMD 202 (302)
T ss_dssp ETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEE
T ss_pred ECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEE
Confidence 777555555446788888887665433322 2222 2355777 555444
No 366
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=44.97 E-value=1.7e+02 Score=26.13 Aligned_cols=139 Identities=6% Similarity=0.002 Sum_probs=69.3
Q ss_pred CEEEEEec--CCeEEEEeCCCeEEEEeCCCCceeEEEc-------CCCCCcEEEEEc-----CCEEEEEe-C-------C
Q 016134 237 PVTCLAVG--RSRLCSGSMDNTIRVWELDTLEPVMTLN-------DHTDAPMSLLCW-----DQFLLSCS-L-------D 294 (394)
Q Consensus 237 ~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~~~~~~-------~h~~~v~~l~~~-----~~~l~s~s-~-------D 294 (394)
....|+|. ++.|+++...+.|++++.. ++....+. ........|+++ +..|..+. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45677776 4426666778999999854 33211111 112345788887 24444432 2 2
Q ss_pred CcEEEEEeCCCc----eeeEee-ccc----CCcceEEEEeeECCCCCcEEEEEeC-------------CCeEEEEECCCC
Q 016134 295 HTIKVWFATGRG----NLEAAY-THK----EDNGVLALGGLNDPDGKPVLICACN-------------DNTVHLYELPSF 352 (394)
Q Consensus 295 g~i~vwd~~~~~----~~~~~~-~~~----~~~~~~~~~~~~s~~g~~~l~sgs~-------------dg~I~iwd~~~~ 352 (394)
..|..|++.... ..+.+. ... ..+..- .+.|.|+|. ++++-+. .+.|.-++....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~--~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGG--RLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCC--CEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCc--cEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 356666665321 112221 111 111111 223689997 5555433 245666665432
Q ss_pred c------------eeEEEe-cCCcEEEEEECC-CCEEEEEe
Q 016134 353 M------------ERGRIF-SKHEVRVIEIGP-DKLFFTGD 379 (394)
Q Consensus 353 ~------------~~~~~~-~~~~v~~l~~sp-~~~l~tgs 379 (394)
- ....+. .......++|+| ++.|+++.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEe
Confidence 0 111121 234588999999 66555443
No 367
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=44.44 E-value=2e+02 Score=26.85 Aligned_cols=99 Identities=20% Similarity=0.300 Sum_probs=50.1
Q ss_pred CCCcEEEEEc--CCEEEEEeCC-CcEEEEEeCCCceeeEeeccc-------CCcceEEEEeeECCC---CCcEEEEEeC-
Q 016134 275 TDAPMSLLCW--DQFLLSCSLD-HTIKVWFATGRGNLEAAYTHK-------EDNGVLALGGLNDPD---GKPVLICACN- 340 (394)
Q Consensus 275 ~~~v~~l~~~--~~~l~s~s~D-g~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~~---g~~~l~sgs~- 340 (394)
-...+.|+|. +.++++ ... +.|++++..++... .+.... .....+.+ +++|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~~~-~~~~~~~~~~~~~g~~Gllgi--a~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLT-ERATGKILRVNPESGSVK-TVFQVPEIVNDADGQNGLLGF--AFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp CSSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEE-EEEECTTCCCCTTSSCSEEEE--EECTTTTTSCEEEEEEEEE
T ss_pred CCCceEEEEcCCCcEEEE-EcCCCEEEEEECCCCcEe-EEecCCccccccCCCCceeEE--EECCCcCcCCEEEEEEecc
Confidence 3456788887 555554 455 46888875444322 221111 12233333 46884 3325555432
Q ss_pred -----------CCeEEEEECCCC-------ceeEE-Eec--CCcEEEEEECCCC-EEEE
Q 016134 341 -----------DNTVHLYELPSF-------MERGR-IFS--KHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 341 -----------dg~I~iwd~~~~-------~~~~~-~~~--~~~v~~l~~sp~~-~l~t 377 (394)
...|.-|++... +.+.. +.. .|....|+|.||| ++++
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 234555554322 11111 221 4678999999999 4444
No 368
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=43.87 E-value=1.4e+02 Score=32.81 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=60.6
Q ss_pred CCeEEEEeCCCCceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCCC-ceeeEeecccCCcceEEEEeeECCCC
Q 016134 254 DNTIRVWELDTLEPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATGR-GNLEAAYTHKEDNGVLALGGLNDPDG 331 (394)
Q Consensus 254 Dg~V~iwd~~~~~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~g 331 (394)
..++.|+|+++.+.++.+.-. ..|.-..|- ...|+..+ +..|.-|++... .+.+.+..+..-.....+....+++.
T Consensus 85 g~~lQiFnl~~k~klks~~~~-e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~ 162 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQ 162 (1630)
T ss_pred CCeEEEeehHHhhhhcccccC-CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCC
Confidence 679999999988877766543 445545554 55665554 467999999643 33333333333223333444458888
Q ss_pred CcEEEEEe------CCCeEEEEECCCC
Q 016134 332 KPVLICAC------NDNTVHLYELPSF 352 (394)
Q Consensus 332 ~~~l~sgs------~dg~I~iwd~~~~ 352 (394)
+.++++|= -.|.+.+|..+..
T Consensus 163 kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 163 KWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred CeEEEEeeccCCCcccceeeeeecccc
Confidence 85555553 3578889887754
No 369
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=43.83 E-value=3.3 Score=21.89 Aligned_cols=14 Identities=50% Similarity=0.743 Sum_probs=11.8
Q ss_pred EeeeCccCCCCCcc
Q 016134 42 YVLEGRCNRNPCRF 55 (394)
Q Consensus 42 ~~~~~~~~~~~~~~ 55 (394)
-|--|||-|+.|+-
T Consensus 18 dwccgrcirnecrn 31 (32)
T 4b2v_A 18 DWCCGRCIRNECRN 31 (32)
T ss_dssp CCCSSEEETTEEEC
T ss_pred chhhhHHHHhhhcC
Confidence 48889999999973
No 370
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=42.50 E-value=1.9e+02 Score=26.02 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=39.0
Q ss_pred CCEEEEEec--CCeEEEEeCCCeEEEEeCCCCce--eEEEc----CCCCCcEEEEEcC-----CEEEEE-e--CCCcEEE
Q 016134 236 RPVTCLAVG--RSRLCSGSMDNTIRVWELDTLEP--VMTLN----DHTDAPMSLLCWD-----QFLLSC-S--LDHTIKV 299 (394)
Q Consensus 236 ~~V~~l~~~--~~~l~sgs~Dg~V~iwd~~~~~~--~~~~~----~h~~~v~~l~~~~-----~~l~s~-s--~Dg~i~v 299 (394)
..-+.|+|. +.++++--..|.|++++..+++. +..+. ........|+++. ..|... + .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 355677875 44454444489999998765553 22221 1234578899862 344432 2 3455666
Q ss_pred EEeCC
Q 016134 300 WFATG 304 (394)
Q Consensus 300 wd~~~ 304 (394)
|.+..
T Consensus 112 ~~~~~ 116 (347)
T 3das_A 112 MLYDE 116 (347)
T ss_dssp EEBCT
T ss_pred EEeCC
Confidence 66543
No 371
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=36.85 E-value=2.7e+02 Score=26.02 Aligned_cols=56 Identities=7% Similarity=0.102 Sum_probs=31.2
Q ss_pred CEEEEEec-CCeEEEEeCCC-eEEEEeCCCCce--eEEEcC------CCCCcEEEEEc-----CCEEEEEe
Q 016134 237 PVTCLAVG-RSRLCSGSMDN-TIRVWELDTLEP--VMTLND------HTDAPMSLLCW-----DQFLLSCS 292 (394)
Q Consensus 237 ~V~~l~~~-~~~l~sgs~Dg-~V~iwd~~~~~~--~~~~~~------h~~~v~~l~~~-----~~~l~s~s 292 (394)
..+.|+|. ...|+++...+ .|++++..+++. +..+.. .......|+++ +..|..+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 45677886 23344445554 788888655543 223321 13456789988 44554443
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=36.44 E-value=2.2e+02 Score=25.01 Aligned_cols=145 Identities=14% Similarity=0.125 Sum_probs=79.5
Q ss_pred CCeEEEEeCCCeEEEEeCCCCce-------eE--EEcCCCCCcEEEE-Ec-CCEEEEEeCCCcEEEEEeCCC--------
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEP-------VM--TLNDHTDAPMSLL-CW-DQFLLSCSLDHTIKVWFATGR-------- 305 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~-------~~--~~~~h~~~v~~l~-~~-~~~l~s~s~Dg~i~vwd~~~~-------- 305 (394)
...+++.+.+|.|+--.+...+. +. .++.. +.+..+. .. .+.++..+..|.++-+....-
T Consensus 8 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~ 86 (312)
T 1suu_A 8 ENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASK 86 (312)
T ss_dssp CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC------
T ss_pred CCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCC
Confidence 45688889999999887654321 11 12322 3333333 33 567888888898777765321
Q ss_pred -ceeeEeecccCCcceEEEEeeEC-CCCCcEEEEEeCCCeEEEEECCCCce-------eEEEecCCcEEEEEECC-CCEE
Q 016134 306 -GNLEAAYTHKEDNGVLALGGLND-PDGKPVLICACNDNTVHLYELPSFME-------RGRIFSKHEVRVIEIGP-DKLF 375 (394)
Q Consensus 306 -~~~~~~~~~~~~~~~~~~~~~~s-~~g~~~l~sgs~dg~I~iwd~~~~~~-------~~~~~~~~~v~~l~~sp-~~~l 375 (394)
..+...........+..+...-. .+.. .|+..+.+|.++.-.+..... ...+...+.+..+.... +..|
T Consensus 87 G~~i~~~l~l~~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~i 165 (312)
T 1suu_A 87 GQNISELINLGDQEEILTIKNSKDLTDDA-YLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEKV 165 (312)
T ss_dssp -CBGGGTSCCCTTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCEE
T ss_pred CcChhhccCCCCCCEEEEEEEeccCCCCC-EEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCEE
Confidence 11111111222223333321111 1334 566778999999988754321 11222244555555443 3378
Q ss_pred EEEeCCCeEEEEeCCC
Q 016134 376 FTGDGAGMLGVWKLLA 391 (394)
Q Consensus 376 ~tgs~Dg~I~vWd~~~ 391 (394)
+..+.+|.+..+.+..
T Consensus 166 ~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 166 ICLSKKGSAFIFNSRD 181 (312)
T ss_dssp EEEETTSEEEEEEGGG
T ss_pred EEEeCCCcEEEEEHHH
Confidence 8888999988887654
No 373
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=34.50 E-value=2.6e+02 Score=25.21 Aligned_cols=54 Identities=24% Similarity=0.296 Sum_probs=36.1
Q ss_pred eECCCCCcEEEEEeCCCeEEEEECCC-Cce--eEEEecCCcEEEEEECC-CC-EEEEEe
Q 016134 326 LNDPDGKPVLICACNDNTVHLYELPS-FME--RGRIFSKHEVRVIEIGP-DK-LFFTGD 379 (394)
Q Consensus 326 ~~s~~g~~~l~sgs~dg~I~iwd~~~-~~~--~~~~~~~~~v~~l~~sp-~~-~l~tgs 379 (394)
+++||++.++++-+..+.|..|++.. +.. ...+......-.+++.+ +| +.+++.
T Consensus 227 a~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 227 NISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEE
T ss_pred eECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEec
Confidence 46999986777777889999999864 322 12232255678889998 48 444343
No 374
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=34.29 E-value=3.4e+02 Score=26.56 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=54.3
Q ss_pred eEEEEeCCC----Cc-eeEEEcCCCCCcEEEEEc--CCEEEEEe-CCCcEEEEEeCCCce-----e----eEeecccCCc
Q 016134 256 TIRVWELDT----LE-PVMTLNDHTDAPMSLLCW--DQFLLSCS-LDHTIKVWFATGRGN-----L----EAAYTHKEDN 318 (394)
Q Consensus 256 ~V~iwd~~~----~~-~~~~~~~h~~~v~~l~~~--~~~l~s~s-~Dg~i~vwd~~~~~~-----~----~~~~~~~~~~ 318 (394)
.|.|.|.+. +. .+..+. -......+..+ |++++.++ .+.++.++|++.-.. + ..+.. +...
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a-e~e~ 376 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG-EPEL 376 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE-CCBC
T ss_pred CeeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe-eccC
Confidence 367777765 22 222222 22334455555 77776665 588999999874111 0 00111 1112
Q ss_pred ceEEEEeeECCCCCcEEEEEeCCCeEEEEECCC
Q 016134 319 GVLALGGLNDPDGKPVLICACNDNTVHLYELPS 351 (394)
Q Consensus 319 ~~~~~~~~~s~~g~~~l~sgs~dg~I~iwd~~~ 351 (394)
..-.+...|+++|. ...+--.|..|.-|++..
T Consensus 377 GlGPlHt~Fd~~G~-aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 377 GLGPLHTTFDGRGN-AYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CSCEEEEEECSSSE-EEEEETTTTEEEEEEHHH
T ss_pred CCcccEEEECCCCc-eEeeeeecceEEEEeccH
Confidence 33334556899995 777788999999999865
No 375
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.51 E-value=1.7e+02 Score=28.64 Aligned_cols=52 Identities=23% Similarity=0.256 Sum_probs=33.3
Q ss_pred eECCCCCcEEEEEeC------------CCeEEEEECCCCceeEEEec--CCcEEEEEECCCC-EEEEE
Q 016134 326 LNDPDGKPVLICACN------------DNTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK-LFFTG 378 (394)
Q Consensus 326 ~~s~~g~~~l~sgs~------------dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~-~l~tg 378 (394)
.|+|.|. ++++-.. .+.+.+.+..+++....+.. ..+++.++|+||+ .|+..
T Consensus 482 ~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 482 GFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred EECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4689998 5554321 13456666666665544433 6789999999999 55443
No 376
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=30.79 E-value=3.4e+02 Score=25.44 Aligned_cols=27 Identities=15% Similarity=0.143 Sum_probs=18.5
Q ss_pred CCcEEEEEc--CC-EEEEEeCCCcEEEEEe
Q 016134 276 DAPMSLLCW--DQ-FLLSCSLDHTIKVWFA 302 (394)
Q Consensus 276 ~~v~~l~~~--~~-~l~s~s~Dg~i~vwd~ 302 (394)
...+.|+|. +. .|+++...|.|++++.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~ 43 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTP 43 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeC
Confidence 345778877 43 3556677899998864
No 377
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=29.21 E-value=1.8e+02 Score=28.33 Aligned_cols=51 Identities=22% Similarity=0.238 Sum_probs=32.8
Q ss_pred eECCCCCcEEE-EEeC-----------CCeEEEEECCCCceeEEEec--CCcEEEEEECCCC-EEEE
Q 016134 326 LNDPDGKPVLI-CACN-----------DNTVHLYELPSFMERGRIFS--KHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 326 ~~s~~g~~~l~-sgs~-----------dg~I~iwd~~~~~~~~~~~~--~~~v~~l~~sp~~-~l~t 377 (394)
.|+++|. +.+ +-.. .+.|..++..+++....+.. ..+++.++|+||+ .|+.
T Consensus 482 ~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 482 GFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred EECCCCC-EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 4688898 444 4221 12577777777766554433 4679999999999 4444
No 378
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=29.18 E-value=47 Score=35.57 Aligned_cols=28 Identities=29% Similarity=0.297 Sum_probs=25.0
Q ss_pred CCeEEEEeCCCeEEEEeCCCCceeEEEc
Q 016134 245 RSRLCSGSMDNTIRVWELDTLEPVMTLN 272 (394)
Q Consensus 245 ~~~l~sgs~Dg~V~iwd~~~~~~~~~~~ 272 (394)
..++++-+.|+++|||++.+++++.+..
T Consensus 249 ~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 249 YNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 5789999999999999999999988753
No 379
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=27.87 E-value=3.3e+02 Score=24.40 Aligned_cols=105 Identities=22% Similarity=0.174 Sum_probs=55.3
Q ss_pred EEcCCCCCcEEEEEc--CCEEEEEeCCCcEEEEEeCCCceeeEeec-----ccCCcceEEEEeeECCC----CCcEEEEE
Q 016134 270 TLNDHTDAPMSLLCW--DQFLLSCSLDHTIKVWFATGRGNLEAAYT-----HKEDNGVLALGGLNDPD----GKPVLICA 338 (394)
Q Consensus 270 ~~~~h~~~v~~l~~~--~~~l~s~s~Dg~i~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~----g~~~l~sg 338 (394)
.+...-.....|+|. +.++++--..|.|++++...++.. .+.. .......+.+ +++|+ +. +.++-
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~-~v~~~~~v~~~g~~GllGi--a~~Pdf~~~g~-lYv~y 101 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT-ELGEVPGVSPSGEGGLLGI--ALSPDYASDHM-VYAYF 101 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EEEECTTCCCBTTBSEEEE--EECTTHHHHCE-EEEEE
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe-eecccCceeecCCCCceee--EeccccccCCE-EEEEE
Confidence 333344567888887 555555444899999876544332 1111 1112233333 46875 44 44432
Q ss_pred --eCCCeEEEEECCCC----------ceeE-EEec--CCcEEEEEECCCC-EEEEE
Q 016134 339 --CNDNTVHLYELPSF----------MERG-RIFS--KHEVRVIEIGPDK-LFFTG 378 (394)
Q Consensus 339 --s~dg~I~iwd~~~~----------~~~~-~~~~--~~~v~~l~~sp~~-~l~tg 378 (394)
..++.|.-|.+... +.+. .+.. .|....|+|.||| ++++.
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~ 157 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGT 157 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEEC
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEE
Confidence 23456666665541 1111 1221 4567789999999 44443
No 380
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=26.15 E-value=46 Score=18.15 Aligned_cols=17 Identities=47% Similarity=0.849 Sum_probs=9.9
Q ss_pred ccccCCCCCCCCCCCCC
Q 016134 18 FNPINGQAGGGVGGGWP 34 (394)
Q Consensus 18 ~~~~~~~~~~~~~~~~~ 34 (394)
||-+.--+|||.|+|+.
T Consensus 6 yngityeggggggggsa 22 (37)
T 2i9o_A 6 YNGITYEGGGGGGGGSA 22 (37)
T ss_dssp SSSCCCCCSCCCCSCSS
T ss_pred ECCEEeecCCCCCcchH
Confidence 55555556666666654
No 381
>2lqh_B Forkhead box O3, FOXO3A; promiscuous binding, intrinsic disorder, transcription; NMR {Homo sapiens} PDB: 2lqi_B
Probab=32.06 E-value=14 Score=21.74 Aligned_cols=18 Identities=39% Similarity=0.768 Sum_probs=10.6
Q ss_pred CCCCCCCCCCCCCceeEE
Q 016134 24 QAGGGVGGGWPTNKVVCV 41 (394)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~ 41 (394)
+.|||.|+|++-+...|-
T Consensus 23 sdgggsgggsgggslecd 40 (52)
T 2lqh_B 23 SDGGGSGGGSGGGSLECD 40 (52)
Confidence 345556666666666664
No 382
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=25.08 E-value=3.5e+02 Score=23.65 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=73.0
Q ss_pred CeEEEEeCCCeEEEEeCCCCceeE---------EEcCCCCCcEE-EEEc-CCEEEEEeCCCcEEEEEeC---C------C
Q 016134 246 SRLCSGSMDNTIRVWELDTLEPVM---------TLNDHTDAPMS-LLCW-DQFLLSCSLDHTIKVWFAT---G------R 305 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~~~~~---------~~~~h~~~v~~-l~~~-~~~l~s~s~Dg~i~vwd~~---~------~ 305 (394)
..+++.+.+|.|+--.+.+.+... .++.. +.+.. +... .+.|+..+..|.+.-+... . +
T Consensus 4 ~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G 82 (307)
T 1zi0_A 4 DVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARG 82 (307)
T ss_dssp EEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCC
Confidence 457888999999887776533211 12222 23333 3333 5677777788886666542 2 1
Q ss_pred ceeeEeecccCCcceEEEEeeEC-CCCCcEEEEEeCCCeEEEEECCCCce-------eEEEecCCcEEEEEECCC-CEEE
Q 016134 306 GNLEAAYTHKEDNGVLALGGLND-PDGKPVLICACNDNTVHLYELPSFME-------RGRIFSKHEVRVIEIGPD-KLFF 376 (394)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~s-~~g~~~l~sgs~dg~I~iwd~~~~~~-------~~~~~~~~~v~~l~~sp~-~~l~ 376 (394)
.++..+........+..+...-. .+.. +++..+.+|.++--.+..... ...+...+.+..+....+ ..|+
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~i~ 161 (307)
T 1zi0_A 83 RPIVNLLPLEQDERITAILPVTEFEEGV-KVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVM 161 (307)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCEEE
T ss_pred eEhhhccCCCCCCEEEEEEEeccCCCCc-EEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCEEE
Confidence 11111111222223333322111 2344 677789999999987753221 111222445555444433 3777
Q ss_pred EEeCCCeEEEEeCC
Q 016134 377 TGDGAGMLGVWKLL 390 (394)
Q Consensus 377 tgs~Dg~I~vWd~~ 390 (394)
..+.+|.+..++..
T Consensus 162 l~T~~G~~irf~~~ 175 (307)
T 1zi0_A 162 LFSAEGKVVRFKES 175 (307)
T ss_dssp EEETTSEEEEEEGG
T ss_pred EECCCCcEEEEEHH
Confidence 78888888777654
No 383
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=24.02 E-value=3.7e+02 Score=23.69 Aligned_cols=143 Identities=9% Similarity=0.021 Sum_probs=76.2
Q ss_pred CeEEEEeCCCeEEEEeCCCC----ceeEEEcCCCCCcEEEEEc-CCEEEEEeCCCcEEEEEeCC---------CceeeEe
Q 016134 246 SRLCSGSMDNTIRVWELDTL----EPVMTLNDHTDAPMSLLCW-DQFLLSCSLDHTIKVWFATG---------RGNLEAA 311 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~----~~~~~~~~h~~~v~~l~~~-~~~l~s~s~Dg~i~vwd~~~---------~~~~~~~ 311 (394)
..+++.+.+|.|+--.+... .....++....-+..+... .+.|+..+..|.+.-+.... +.++...
T Consensus 6 ~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~ 85 (323)
T 1wp5_A 6 DVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANI 85 (323)
T ss_dssp EEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGT
T ss_pred cEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhc
Confidence 45788899999987765421 1111233332222333333 66777778888866665421 1111121
Q ss_pred ecccCCcceEEEEeeECC--CCCcEEEEEeCCCeEEEEECCCCce--------eEEEecCCcEEEEEECC-CCEEEEEeC
Q 016134 312 YTHKEDNGVLALGGLNDP--DGKPVLICACNDNTVHLYELPSFME--------RGRIFSKHEVRVIEIGP-DKLFFTGDG 380 (394)
Q Consensus 312 ~~~~~~~~~~~~~~~~s~--~g~~~l~sgs~dg~I~iwd~~~~~~--------~~~~~~~~~v~~l~~sp-~~~l~tgs~ 380 (394)
........+..+.. ... +.. +|+..+.+|.++--.+..... ...+...+.+..+.... +..|+..+.
T Consensus 86 i~L~~~e~Iv~~~~-~~~~~~~~-~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~T~ 163 (323)
T 1wp5_A 86 IPIDRDEEIIKAIP-INDFELNG-YFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLVTH 163 (323)
T ss_dssp SCCCTTCCEEEEEE-ESCTTSSC-EEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEEET
T ss_pred cCCCCCCEEEEEEE-ecccCCCc-eEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEEeC
Confidence 11222223333321 122 244 677789999999988753322 11222245555554443 337778888
Q ss_pred CCeEEEEeCC
Q 016134 381 AGMLGVWKLL 390 (394)
Q Consensus 381 Dg~I~vWd~~ 390 (394)
+|.+..+...
T Consensus 164 ~G~~irf~~~ 173 (323)
T 1wp5_A 164 NGYALWFDES 173 (323)
T ss_dssp TSEEEEEEGG
T ss_pred CCcEEEEEHH
Confidence 8988877764
No 384
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=23.43 E-value=3.9e+02 Score=23.66 Aligned_cols=144 Identities=9% Similarity=0.027 Sum_probs=75.0
Q ss_pred CeEEEEeCCCeEEEEeCCCCc-------eeEEEcC-CCCCcEEEEE-c-CCEEEEEeCCCcEEEEEe---CC------Cc
Q 016134 246 SRLCSGSMDNTIRVWELDTLE-------PVMTLND-HTDAPMSLLC-W-DQFLLSCSLDHTIKVWFA---TG------RG 306 (394)
Q Consensus 246 ~~l~sgs~Dg~V~iwd~~~~~-------~~~~~~~-h~~~v~~l~~-~-~~~l~s~s~Dg~i~vwd~---~~------~~ 306 (394)
..+++.+.+|.|+--.+++.+ -+..+.- ..+.+..+.. . .+.|+.-+..|.+..... .. +.
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~ 83 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQ 83 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCE
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCE
Confidence 457788889999876543211 1111111 1223333322 2 566666677777655543 22 12
Q ss_pred eeeEeecccCCcceEEEEeeEC-CCCCcEEEEEeCCCeEEEEECCCCcee-------EEEecCCcEEEEEECCCC-EEEE
Q 016134 307 NLEAAYTHKEDNGVLALGGLND-PDGKPVLICACNDNTVHLYELPSFMER-------GRIFSKHEVRVIEIGPDK-LFFT 377 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~s-~~g~~~l~sgs~dg~I~iwd~~~~~~~-------~~~~~~~~v~~l~~sp~~-~l~t 377 (394)
++..+........+..+...-. ++.. +++..+.+|.|+--.+...... ..+...+.+..+...... .|+.
T Consensus 84 ~i~~~l~l~~~e~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill 162 (327)
T 3uc1_A 84 HVANLLAFQPEERIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLL 162 (327)
T ss_dssp EHHHHTTCCTTCCEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEE
T ss_pred EHHHccCCCCCCEEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEE
Confidence 2222222222233343322111 1344 8888999999999887653221 122224455555444444 7788
Q ss_pred EeCCCeEEEEeCC
Q 016134 378 GDGAGMLGVWKLL 390 (394)
Q Consensus 378 gs~Dg~I~vWd~~ 390 (394)
.+..|.+..+.+.
T Consensus 163 ~T~~G~~~rf~~~ 175 (327)
T 3uc1_A 163 VSANGQSIRFSAT 175 (327)
T ss_dssp EETTSEEEEEECC
T ss_pred EECCCeEEEEECc
Confidence 8888988888765
Done!