BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016136
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis
thaliana GN=At1g22950 PE=2 SV=2
Length = 397
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 214/348 (61%), Positives = 278/348 (79%)
Query: 46 RLRLNPSKDHKPESYDDMQLDFSPSIFSSLERYLPPPMLGLNREEKVKFMREILMKYLPQ 105
+LR P+++H+PE+Y+D+ LD+SPS+F+SLERYLP +L R +K FMR++L++Y P
Sbjct: 39 KLRRTPNEEHEPENYEDLPLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLLLRYSPD 98
Query: 106 GERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPFVKAIQDNTEESFRSIISEPS 165
ER RV RH++YR KI+++YQ LH E+Y L +FF P F+ A +E +FRS + E
Sbjct: 99 TERVRVLRHKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKSEPNFRSSMVESY 158
Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKL 225
PG+FTFEM +P+FCE+LLAEVE+ EKWV +++ IMRPNTMN +G VLDDFG ++ML KL
Sbjct: 159 PGIFTFEMFKPQFCEMLLAEVEHMEKWVYDSRSTIMRPNTMNNFGVVLDDFGFDSMLQKL 218
Query: 226 METYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTG 285
++ +I P+++V F EV G++LDSHHG++VEYGKDRDVDLGFHVDDSEV+LNVCLGKQF+G
Sbjct: 219 VDDFISPIAQVLFPEVCGTSLDSHHGYIVEYGKDRDVDLGFHVDDSEVSLNVCLGKQFSG 278
Query: 286 GELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCR 345
GEL+FRG RC+KHVN+ S +E++DYSHVPG A+LHRGRHRHGARATTSGHR NL+LWCR
Sbjct: 279 GELYFRGVRCDKHVNSDSTEKEVYDYSHVPGHAILHRGRHRHGARATTSGHRANLILWCR 338
Query: 346 SSVFREMKRYQKDFSSWCGECFREKKERQRLSIAATKSELLKQEGEST 393
SS FREMK YQ+DFS WCG C +K+ RQR SI ATK L ++ E T
Sbjct: 339 SSTFREMKNYQRDFSGWCGGCKLDKQRRQRDSINATKEILARKAAEKT 386
>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1
Length = 349
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 135/240 (56%), Gaps = 17/240 (7%)
Query: 118 RQKIITNYQPLHRELYNLHIGNFFVPPFVKAI------QDNTEESFRSIISEPSPGVFTF 171
R++I +Y+PL+ E+Y L +F F+ A+ Q N E + S ++
Sbjct: 80 RREISLHYKPLYPEVYVLQ-ESFLAAEFLTAVKYSKSPQANVEGLLHHLHSITDKRIYRL 138
Query: 172 EMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG-LETMLDKLMETYI 230
+ P FC L+ E+ENFE+ + RPNTMN YG +L++ G ++ + L E YI
Sbjct: 139 PVFIPEFCAKLVEELENFER----SDLPKGRPNTMNNYGILLNELGFVDALTAPLCEKYI 194
Query: 231 RPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFF 290
PL+ + F + GG LDSH FVV+Y D+DL H D++EVTLNV LGK+FT G L+F
Sbjct: 195 EPLTSLLFPDWGGGCLDSHRAFVVKYALQEDLDLSCHYDNAEVTLNVSLGKEFTDGNLYF 254
Query: 291 RGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR 350
+ E VN + E H+ G+ +LHRG+H HGA +SG R NL+LW R+S R
Sbjct: 255 SDMK-EVPVNERTYAE----VEHITGQGILHRGQHVHGALPISSGERWNLILWMRASDVR 309
>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1
Length = 345
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 141/254 (55%), Gaps = 21/254 (8%)
Query: 105 QGERTRVQRHR---DYRQKIITN-YQPLHRELYNLHIGNFFVPPFVKAI------QDNTE 154
Q E R Q H+ R +I Y PLH+ +Y+L +F P ++ + + N +
Sbjct: 59 QAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFLAPELLEMVKYCASSEANVQ 117
Query: 155 ESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLD 214
+ I +E + VF F++ + FC+ LL E+E+FE ++ RPNTMN YG VL+
Sbjct: 118 GLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFE----QSDAPKGRPNTMNNYGIVLN 173
Query: 215 DFGL-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
+ G E + L E Y+RPL+ + +++ GG+ LDSH FVV+Y D++L +H D+SEV
Sbjct: 174 ELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVVKYDMHEDLNLSYHYDNSEV 233
Query: 274 TLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATT 333
TLNV LGK FT G LFF R E + H +LHRG+H HGA + +
Sbjct: 234 TLNVSLGKDFTEGNLFFGDMR-----QVPLSETECVEVEHRVTEGLLHRGQHMHGALSIS 288
Query: 334 SGHRVNLLLWCRSS 347
SG R NL++W R+S
Sbjct: 289 SGTRWNLIIWMRAS 302
>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2
Length = 350
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 139/273 (50%), Gaps = 31/273 (11%)
Query: 108 RTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------ESF 157
R R+ + R+ +I ++Y P E+Y+ P F+ + + +
Sbjct: 71 RQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDADLKGLLQRL 130
Query: 158 RSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFG 217
++ E ++ + FC+ LL E+E+FE ++ RPNTMN YG +L + G
Sbjct: 131 ETVSEEKR--IYRVPVFTAPFCQALLEELEHFE----QSDMPKGRPNTMNNYGVLLHELG 184
Query: 218 L-ETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLN 276
L E ++ L E +++PL + + + GG LDSH FVV+Y +D++LG H D++E+TLN
Sbjct: 185 LDEPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLN 244
Query: 277 VCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGH 336
V LGK FTGG L+F G + E + HV G+ VLHRG HGAR +G
Sbjct: 245 VALGKVFTGGALYFGGL-----FQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGE 299
Query: 337 RVNLLLWCRSSVFREMKRYQKDFSSWCGECFRE 369
R NL++W R+S R +S C C RE
Sbjct: 300 RWNLVVWLRASAVR---------NSLCPMCCRE 323
>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1
Length = 349
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 135/256 (52%), Gaps = 22/256 (8%)
Query: 106 GERTRVQRHRDYRQKII-TNYQPLHRELYNLHIGNFFVPPFVKAIQDNTE---------E 155
G R R+ + R+ +I ++Y P E+Y+ P F+ A + +T +
Sbjct: 68 GRRRRLGQESAVRKALIASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSPGADLEGLLQ 127
Query: 156 SFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD 215
++ E ++ + +FC+ LL E+E+FE ++ RPNTMN +G ++ +
Sbjct: 128 RLETVSEEKR--IYRVPVFSAKFCQTLLEELEHFE----QSDMPKGRPNTMNNHGVLMYE 181
Query: 216 FGLET-MLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVT 274
GL+ ++ L E ++ PL + + + GG LDSH FVV+Y +D+DLG H D++E+T
Sbjct: 182 LGLDDPLVTPLRERFLLPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGCHYDNAELT 241
Query: 275 LNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTS 334
LNV LGK FTGG L+F G + +E + HV G +LHRG HGAR
Sbjct: 242 LNVALGKDFTGGALYFGGL-----FQAPAALKETLEVEHVVGSGILHRGGQLHGARPLCK 296
Query: 335 GHRVNLLLWCRSSVFR 350
G R NL++W R+S R
Sbjct: 297 GERWNLVVWLRASAVR 312
>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis
elegans GN=let-268 PE=1 SV=1
Length = 730
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV----NEAKFRIMRPNTMNKYGAVLDD 215
++ + P V+ F ++ RFCE L+ E+E F +W N+ + N + ++
Sbjct: 549 VVDQACPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTR-DIHMNQ 607
Query: 216 FGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTL 275
G E M+TY+RP+ + F ++S+ FVV Y + L H D S ++
Sbjct: 608 VGFERQWLYFMDTYVRPVQEKTFIGYYHQPVESNMMFVVRYKPEEQPSLRPHHDASTFSI 667
Query: 276 NVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHGAR 330
++ L G+ + GG G R ++ N +E+ G A++ GR H H
Sbjct: 668 DIALNKKGRDYEGG-----GVRYIRY-NCTVPADEV-------GYAMMFPGRLTHLHEGL 714
Query: 331 ATTSGHR 337
ATT G R
Sbjct: 715 ATTKGTR 721
>sp|O60568|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens
GN=PLOD3 PE=1 SV=1
Length = 738
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 273 VTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRH 327
TLNV L G + GG G R ++ S + G A+LH GR H H
Sbjct: 673 FTLNVALNHKGLDYEGG-----GCRFLRYDCVISSPRK--------GWALLHPGRLTHYH 719
Query: 328 GARATTSGHR 337
TT G R
Sbjct: 720 EGLPTTWGTR 729
>sp|Q5R6K5|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii
GN=PLOD3 PE=2 SV=1
Length = 738
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------ 212
I+ +P P V+ F +L + C+ L+AE+E++ +W + R Y V
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIH 613
Query: 213 LDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE 272
+ G E +L+ TY+ P+++ F + + FVV Y D L H D S
Sbjct: 614 MKQVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSST 672
Query: 273 VTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRH 327
TLNV L G + GG G R ++ S + G A+LH GR H H
Sbjct: 673 FTLNVALNHKGLDYEGG-----GCRFLRYDCVISSPRK--------GWALLHPGRLTHYH 719
Query: 328 GARATTSGHR 337
TT G R
Sbjct: 720 EGLPTTWGTR 729
>sp|Q9R0E1|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus
GN=Plod3 PE=1 SV=1
Length = 741
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 213
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEYLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 274 TLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHG 328
TLNV L G + GG F C S G A+LH GR H H
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDCRIS-------------SPRKGWALLHPGRLTHYHE 723
Query: 329 ARATTSGHR 337
TT G R
Sbjct: 724 GLPTTRGTR 732
>sp|Q5U367|PLOD3_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Rattus
norvegicus GN=Plod3 PE=2 SV=1
Length = 741
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 76/189 (40%), Gaps = 28/189 (14%)
Query: 160 IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAV------L 213
++ +P P V+ F +L + C+ L+ E+E++ +W + R Y V +
Sbjct: 561 LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQW---SGGRHEDSRLAGGYENVPTVDIHM 617
Query: 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEV 273
G E +L+ TY+ P+++ F T + FVV Y D L H D S
Sbjct: 618 KQVGYEDQWLQLLRTYVGPMTEHLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTF 676
Query: 274 TLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR--HRHG 328
TLNV L G + GG F C S G A+LH GR H H
Sbjct: 677 TLNVALNHKGVDYEGGGCRFLRYDCRVS-------------SPRKGWALLHPGRLTHYHE 723
Query: 329 ARATTSGHR 337
TT G R
Sbjct: 724 GLPTTRGTR 732
>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus
GN=Plod2 PE=2 SV=2
Length = 737
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 215
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 216 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
GLE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 270 DSEVTLNVCL---GKQFTGGELFFRGTRC 295
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|Q5UQC3|PLOD_MIMIV Procollagen lysyl hydroxylase and glycosyltransferase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L230 PE=1
SV=1
Length = 895
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 143 PPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVN--EAKF-- 198
P F+ +Q+ + + I ++ V++F + P FC+ ++ ++ W ++ F
Sbjct: 703 PEFLSHLQNFKDFDYTEICND----VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYFDP 758
Query: 199 RIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGK 258
RI + L + GL+ ++ Y+ P + + T D + FVV+Y
Sbjct: 759 RIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNY--KTKDINLAFVVKYDM 816
Query: 259 DRDVDLGFHVDDSEVTLNVCL---GKQFT-GGELFFRGTRCEKHVNTGSQTEEIFDYSHV 314
+R +L H D S TLN+ L GK++T GG F R K + G +
Sbjct: 817 ERQSELAPHHDSSTYTLNIALNEYGKEYTAGGCEFIR----HKFIWQGQKV--------- 863
Query: 315 PGRAVLHRGR--HRHGARATTSGHRVNLL 341
G A +H G+ H A TSG R L+
Sbjct: 864 -GYATIHAGKLLAYHRALPITSGKRYILV 891
>sp|Q811A3|PLOD2_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Rattus
norvegicus GN=Plod2 PE=2 SV=1
Length = 737
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 159 SIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD--- 215
+I+ +P P VF F + R C+ L+ E+E++ KW + K R Y V D
Sbjct: 556 NIVEQPCPDVFWFPIFSERACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIH 612
Query: 216 ---FGLETMLDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVD 269
LE + + +I P++ KVF + G + L+ FVV+Y +R L H D
Sbjct: 613 MKQIDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHD 668
Query: 270 DSEVTLNVCL---GKQFTGGELFFRGTRC 295
S T+N+ L G+ F GG F C
Sbjct: 669 ASTFTINIALNNVGEDFQGGGCKFLRYNC 697
>sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens
GN=PLOD2 PE=1 SV=2
Length = 737
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%)
Query: 112 QRHRDYRQKIITNYQPLHRELYNLHIGNFFVPPF---VKAIQDNTEESF-RSIISEPSPG 167
RH R NY H YN + F P K I + + F +I+ +P P
Sbjct: 508 NRHEFGRLLSTANYNTSH---YNNDLWQIFENPVDWKEKYINRDYSKIFTENIVEQPCPD 564
Query: 168 VFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDD------FGLETM 221
VF F + + C+ L+ E+E++ KW + K R Y V D LE +
Sbjct: 565 VFWFPIFSEKACDELVEEMEHYGKW-SGGKHHDSR--ISGGYENVPTDDIHMKQVDLENV 621
Query: 222 LDKLMETYIRPLS-KVF--FAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVC 278
+ +I P++ KVF + G + L+ FVV+Y +R L H D S T+N+
Sbjct: 622 WLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQRSLRPHHDASTFTINIA 677
Query: 279 L---GKQFTGGELFFRGTRC 295
L G+ F GG F C
Sbjct: 678 LNNVGEDFQGGGCKFLRYNC 697
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus
GN=PLOD1 PE=1 SV=1
Length = 730
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 75/200 (37%), Gaps = 23/200 (11%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP 203
K I +N + + ++ P P V+ F + C+ L+ E+E++ KW + RI
Sbjct: 536 KYIHENYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGG 595
Query: 204 -NTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDV 262
+ ++ G E K + YI P+++ + T FVV Y D
Sbjct: 596 YENVPTIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKT-QFELAFVVRYKPDEQP 654
Query: 263 DLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAV 319
L H D S T+N+ L G + GG F C G +
Sbjct: 655 SLMPHHDASTFTINIALNRVGIDYEGGGCRFLRYNCSIRAPR-------------KGWTL 701
Query: 320 LHRGR--HRHGARATTSGHR 337
+H GR H H TT G R
Sbjct: 702 MHPGRLTHYHEGLPTTKGTR 721
>sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens
GN=PLOD1 PE=1 SV=2
Length = 727
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 75/197 (38%), Gaps = 24/197 (12%)
Query: 150 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWV--NEAKFRIMRP-NTM 206
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W N RI +
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYENV 596
Query: 207 NKYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 265
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 266 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 322
H D S T+N+ L G + GG F C G ++H
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWTLMHP 701
Query: 323 GR--HRHGARATTSGHR 337
GR H H TT G R
Sbjct: 702 GRLTHYHEGLPTTRGTR 718
>sp|Q63321|PLOD1_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Rattus
norvegicus GN=Plod1 PE=2 SV=1
Length = 728
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 534 KYIHENYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHYGQWSLGDNKDNRIQGG 593
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI PL+ K++ + D FVV Y D
Sbjct: 594 YENVPTIDIHMNQITFEREWHKFLVEYIAPLTEKLYPGYYTKAQFDL--AFVVRYKPDEQ 651
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRA 318
L H D S T+N+ L G+ + GG F C G A
Sbjct: 652 PSLMPHHDASTFTINIALNRVGEDYEGGGCRFLRYNCSVRAPR-------------KGWA 698
Query: 319 VLHRGR--HRHGARATTSGHR 337
++H GR H H TT G R
Sbjct: 699 LMHPGRLTHYHEGLPTTKGTR 719
>sp|Q9R0E2|PLOD1_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus
GN=Plod1 PE=1 SV=1
Length = 728
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 25/201 (12%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 534 KYIHENYTKALAGKLVETPCPDVYWFPIFTEAACDELVEEMEHYGQWSLGDNKDNRIQGG 593
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI P++ K++ + D FVV Y D
Sbjct: 594 YENVPTIDIHMNQITFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQ 651
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRA 318
L H D S T+N+ L G+ + GG F C G A
Sbjct: 652 PSLMPHHDASTFTVNIALNRVGEDYEGGGCRFLRYNCSVRAPR-------------KGWA 698
Query: 319 VLHRGR--HRHGARATTSGHR 337
+LH GR H H TT G R
Sbjct: 699 LLHPGRLTHYHEGLPTTKGTR 719
>sp|Q5R9N3|PLOD1_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Pongo abelii
GN=PLOD1 PE=2 SV=1
Length = 727
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 77/197 (39%), Gaps = 24/197 (12%)
Query: 150 QDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPNTMN- 207
Q+ T+ ++ P P V+ F + C+ L+ E+E+F +W + + K ++ N
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGDNKDNRIQGGYENV 596
Query: 208 -KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRDVDLG 265
++ G E K + YI P++ K++ + D FVV Y D L
Sbjct: 597 PTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQPSLM 654
Query: 266 FHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 322
H D S T+N+ L G + GG F C G ++H
Sbjct: 655 PHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWTLMHP 701
Query: 323 GR--HRHGARATTSGHR 337
GR H H TT G R
Sbjct: 702 GRLTHYHEGLPTTRGTR 718
>sp|O77588|PLOD1_BOVIN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Bos taurus
GN=PLOD1 PE=2 SV=2
Length = 726
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 25/201 (12%)
Query: 147 KAIQDNTEESFRS-IISEPSPGVFTFEMLQPRFCELLLAEVENFEKW-VNEAKFRIMRPN 204
K I +N ++ ++ P P V+ F + C+ L+ E+E++ +W + + K ++
Sbjct: 532 KYIHENYTKALAGKMVEMPCPDVYWFPIFTETACDELVEEMEHYGQWSLGDNKDNRIQGG 591
Query: 205 TMN--KYGAVLDDFGLETMLDKLMETYIRPLS-KVFFAEVGGSTLDSHHGFVVEYGKDRD 261
N ++ E K + YI P++ K++ + D FVV Y D
Sbjct: 592 YENVPTIDIHMNQINFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDL--AFVVRYKPDEQ 649
Query: 262 VDLGFHVDDSEVTLNVCL---GKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRA 318
L H D S T+N+ L G + GG F C G
Sbjct: 650 PSLVPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPR-------------KGWT 696
Query: 319 VLHRGR--HRHGARATTSGHR 337
++H GR H H TT G R
Sbjct: 697 LMHPGRLTHYHEGLPTTKGTR 717
>sp|Q5M5E1|Y548_STRT2 UPF0176 protein stu0548 OS=Streptococcus thermophilus (strain ATCC
BAA-250 / LMG 18311) GN=stu0548 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q5M0V5|Y548_STRT1 UPF0176 protein str0548 OS=Streptococcus thermophilus (strain CNRZ
1066) GN=str0548 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q03LR5|Y588_STRTD UPF0176 protein STER_0588 OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=STER_0588 PE=3 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIVTYGKDPEVQGELWDGKLYVFDERIAVDVNHVDPIVVGKDWFDGTPCERYVNCGN 267
>sp|Q0AP20|Y1675_MARMM PKHD-type hydroxylase Mmar10_1675 OS=Maricaulis maris (strain
MCS10) GN=Mmar10_1675 PE=3 SV=1
Length = 219
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 23/138 (16%)
Query: 265 GFHVDDS---------EVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVP 315
G H+DD+ TL + + GGEL G E + +
Sbjct: 93 GPHIDDALMGGRRADLSFTLFLSDPDSYDGGELVMDGPDGETEIKLAA------------ 140
Query: 316 GRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFR-EMKRYQKDFSSWCGECF-REKKER 373
G AV++ H T G RV ++ W RS V R + + D F R+ K R
Sbjct: 141 GDAVVYATSAIHQVAPVTRGERVAVVGWVRSLVRRPDQREILFDLDQVSAALFARDGKTR 200
Query: 374 QRLSIAATKSELLKQEGE 391
+ + TK+ LL+Q E
Sbjct: 201 ELDLVLKTKANLLRQWAE 218
>sp|A4VTD4|Y406_STRSY UPF0176 protein SSU05_0406 OS=Streptococcus suis (strain 05ZYH33)
GN=SSU05_0406 PE=3 SV=1
Length = 327
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|A4VZL1|Y392_STRS2 UPF0176 protein SSU98_0392 OS=Streptococcus suis (strain 98HAH33)
GN=SSU98_0392 PE=3 SV=1
Length = 327
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVRGELWDGKMYVFDERIAVDVNHVNPVVVGKDWFDGTPCERYVNCGN 267
>sp|A3CLI1|Y593_STRSV UPF0176 protein SSA_0593 OS=Streptococcus sanguinis (strain SK36)
GN=SSA_0593 PE=3 SV=1
Length = 328
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVNPVVIGKDWFDGTPCERYVNCGN 267
>sp|Q02YX4|Y1324_LACLS UPF0176 protein LACR_1324 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=LACR_1324 PE=3 SV=1
Length = 319
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV--DLGF---HVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V DL + +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWYGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|Q9CG88|YMDE_LACLA UPF0176 protein YmdE OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=ymdE PE=3 SV=1
Length = 319
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|A8AVI2|Y476_STRGC UPF0176 protein SGO_0476 OS=Streptococcus gordonii (strain Challis
/ ATCC 35105 / CH1 / DL1 / V288) GN=SGO_0476 PE=3 SV=1
Length = 328
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D +++++ G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERISVDINHVDPVVIGKDWFDGTPCERYVNCGN 267
>sp|A2RKR4|Y1287_LACLM UPF0176 protein llmg_1287 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=llmg_1287 PE=3 SV=1
Length = 319
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V DS + + + + G +F G+ CE+++N G+
Sbjct: 204 HGGIATYGKDPEVQGDLWDGQMYVFDSRIAVPINQKEHVIVGRDWFDGSPCERYINCGN 262
>sp|Q8A7D1|TILS_BACTN tRNA(Ile)-lysidine synthase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=tilS PE=3 SV=1
Length = 426
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 21/112 (18%)
Query: 82 PMLGLNREEKVKFMREILMKYLPQGERTRVQRHRDYRQKIITNYQPLHRELYNLHIGNFF 141
P+L +NREE ++++++I ++ + R+ KI N PL +E+ N + N
Sbjct: 159 PLLCINREEIIRYLQQIGQDFVTDSTNLEDEYTRN---KIRLNLLPLMQEI-NPSVKNSL 214
Query: 142 VPP----------FVKAIQDN-----TEESFR--SIISEPSPGVFTFEMLQP 176
+ + K I + T E R +++ EP+P F FE L P
Sbjct: 215 IETSNHLNDVATIYNKVIDEAKTRIITPEGIRIDALLDEPAPEAFLFETLHP 266
>sp|C1CHZ8|Y154_STRZP UPF0176 protein SPP_0154 OS=Streptococcus pneumoniae (strain P1031)
GN=SPP_0154 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B5E5X4|Y092_STRP4 UPF0176 protein SPG_0092 OS=Streptococcus pneumoniae serotype 19F
(strain G54) GN=SPG_0092 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CBR1|Y118_STRZJ UPF0176 protein SPJ_0118 OS=Streptococcus pneumoniae (strain JJA)
GN=SPJ_0118 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B8ZJY0|Y105_STRPJ UPF0176 protein SPN23F01050 OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=SPN23F01050 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67330|Y095_STRPN UPF0176 protein SP_0095 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=SP_0095 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|Q04MY5|Y091_STRP2 UPF0176 protein SPD_0091 OS=Streptococcus pneumoniae serotype 2
(strain D39 / NCTC 7466) GN=SPD_0091 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B2IRH1|Y090_STRPS UPF0176 protein SPCG_0090 OS=Streptococcus pneumoniae (strain
CGSP14) GN=SPCG_0090 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P67331|Y084_STRR6 UPF0176 protein spr0084 OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=spr0084 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|B1I7Z3|Y194_STRPI UPF0176 protein SPH_0194 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=SPH_0194 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1C9Z1|Y154_STRP7 UPF0176 protein SP70585_0154 OS=Streptococcus pneumoniae (strain
70585) GN=SP70585_0154 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|C1CNW3|Y125_STRZT UPF0176 protein SPT_0125 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=SPT_0125 PE=3 SV=1
Length = 328
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG + YGKD +V D +V D + ++V G+ +F GT CE++VN G+
Sbjct: 209 HGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGN 267
>sp|P22348|PURE_METSM Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanobrevibacter smithii GN=purE PE=3 SV=1
Length = 339
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 62 DMQLDFSPSIFSSLERYLPPPM--LGLNREEKVKFMREILMKYLPQGERTRVQRHRD-YR 118
D+++ +++SS++ P P+ +G++R + + ++ + R +V ++ YR
Sbjct: 89 DVKVSGLDALYSSVQMPYPSPVATVGIDRGDNGAILAARILGLYDEEIRKKVLESKEGYR 148
Query: 119 QKIITNYQPLHRELYNLHIGNFFV 142
QK+I N + + +++ N HI N F+
Sbjct: 149 QKVIKNNEEIVQKIDNPHITNDFL 172
>sp|A8F9I7|Y205_BACP2 UPF0176 protein BPUM_0205 OS=Bacillus pumilus (strain SAFR-032)
GN=BPUM_0205 PE=3 SV=1
Length = 322
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 251 GFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
G +V YGKD +V D +V D+ +T+ V + G+ FF G CE++VN +
Sbjct: 205 GGIVTYGKDPEVQGKLWDGQCYVFDTRLTVPVNQTEHVVVGKDFFTGEPCERYVNCAN 262
>sp|Q73A25|Y1961_BACC1 UPF0176 protein BCE_1961 OS=Bacillus cereus (strain ATCC 10987)
GN=BCE_1961 PE=3 SV=1
Length = 319
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D + + V + G+ +F G CE++VN +
Sbjct: 206 HGGIVTYGKDPEVQGELWDGQCYVFDERIAVPVNQKEHVIVGKDYFTGEPCERYVNCAN 264
>sp|A1VQD4|Y2559_POLNA PKHD-type hydroxylase Pnap_2559 OS=Polaromonas naphthalenivorans
(strain CJ2) GN=Pnap_2559 PE=3 SV=1
Length = 227
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 28/111 (25%)
Query: 253 VVEYGKDRDVDLGFHVDD-------------SEVTLNVCLGK--QFTGGELFFRGTRCEK 297
+ YG D + G HVD+ ++++ V L + GGEL T E+
Sbjct: 84 INRYGGDSNF-YGNHVDNAIRAVPNSPQRVRTDISCTVFLNDPGDYDGGELTIADTYGEQ 142
Query: 298 HVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSV 348
V + G AVL+ G H R T GHR+ W S V
Sbjct: 143 RVKLPA------------GHAVLYPGTSLHQVRPVTRGHRLACFFWIESLV 181
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 166 PGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDK 224
P + L RFCEL E+EN EK VN+ K + + P ++ Y ++ +G + DK
Sbjct: 422 PDHLAYNCLIRRFCEL--GEMENAEKEVNKMKLKGVSP-SVETYNILIGGYGRKYEFDK 477
>sp|Q65EW5|Y3574_BACLD UPF0176 protein BLi03574/BL00834 OS=Bacillus licheniformis (strain
DSM 13 / ATCC 14580) GN=BLi03574 PE=3 SV=1
Length = 322
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 250 HGFVVEYGKDRDV-----DLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGS 303
HG +V YGKD +V D +V D +++ V + G+ +F G CE++VN +
Sbjct: 204 HGGIVTYGKDPEVQGELWDGKCYVFDERISVPVNQKEHVIVGKDYFTGEPCERYVNCAN 262
>sp|B5XT12|Y3192_KLEP3 PKHD-type hydroxylase KPK_3192 OS=Klebsiella pneumoniae (strain
342) GN=KPK_3192 PE=3 SV=1
Length = 225
Score = 32.3 bits (72), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 231 RPLSKVFFAEVG-GSTLDSHHGFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELF 289
R +S F G G T +GF V+ ++ + G+ D TL +C + + GGEL
Sbjct: 77 RTISAPLFNRYGPGET----YGFHVDGAVRQNAEAGWMRTDLSATLFLCDPESYEGGELV 132
Query: 290 FRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVF 349
T + V + G VL+ H T G R LW +S V
Sbjct: 133 IEDTYGQHRVKLPA------------GHLVLYPASSLHCVTPVTHGVRQASFLWIQSMVR 180
Query: 350 REMKR 354
+ +R
Sbjct: 181 DDKQR 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,631,817
Number of Sequences: 539616
Number of extensions: 6580188
Number of successful extensions: 15336
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 15270
Number of HSP's gapped (non-prelim): 54
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)