Query 016136
Match_columns 394
No_of_seqs 203 out of 315
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 08:30:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dkq_A PKHD-type hydroxylase S 99.7 2E-17 6.9E-22 157.4 10.9 160 166-347 19-196 (243)
2 2jig_A Prolyl-4 hydroxylase; h 99.7 2.7E-17 9.1E-22 152.1 9.8 174 165-350 19-221 (224)
3 3itq_A Prolyl 4-hydroxylase, a 99.7 4.1E-17 1.4E-21 152.5 11.1 156 165-349 38-215 (216)
4 2hbt_A EGL nine homolog 1; pro 99.2 8.8E-11 3E-15 111.3 14.9 169 166-353 26-220 (247)
5 3kt7_A PKHD-type hydroxylase T 98.1 3.2E-05 1.1E-09 82.1 13.8 198 138-348 13-230 (633)
6 2rdq_A 1-deoxypentalenic acid 97.7 0.00089 3.1E-08 62.6 14.6 87 261-347 134-253 (288)
7 2a1x_A Phytanoyl-COA dioxygena 97.6 0.0014 4.8E-08 62.2 15.3 84 264-347 142-255 (308)
8 2rg4_A Uncharacterized protein 97.6 0.00049 1.7E-08 63.7 11.7 93 250-344 104-205 (216)
9 2opw_A Phyhd1 protein; double- 97.3 0.0028 9.6E-08 59.4 13.6 89 258-346 147-266 (291)
10 2fct_A Syringomycin biosynthes 97.2 0.0052 1.8E-07 58.2 13.6 42 307-348 218-262 (313)
11 3gja_A CYTC3; halogenase, beta 97.0 0.0052 1.8E-07 59.5 11.6 41 307-347 220-263 (319)
12 3emr_A ECTD; double stranded b 96.8 0.0044 1.5E-07 59.9 9.6 175 166-346 46-268 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 95.5 0.067 2.3E-06 52.9 10.2 173 166-345 40-273 (344)
14 2iuw_A Alkylated repair protei 94.8 0.11 3.6E-06 48.7 9.0 160 166-343 40-227 (238)
15 3tht_A Alkylated DNA repair pr 94.6 0.084 2.9E-06 52.3 8.1 144 161-333 106-274 (345)
16 3s57_A Alpha-ketoglutarate-dep 94.4 0.3 1E-05 44.7 10.9 158 167-342 12-199 (204)
17 3i3q_A Alpha-ketoglutarate-dep 90.3 0.78 2.7E-05 42.4 7.9 80 250-343 106-200 (211)
18 3pl0_A Uncharacterized protein 87.9 0.41 1.4E-05 45.7 4.3 76 263-348 162-249 (254)
19 1gp6_A Leucoanthocyanidin diox 82.9 2.4 8.2E-05 41.5 7.1 79 253-347 214-308 (356)
20 1w9y_A 1-aminocyclopropane-1-c 82.5 2.6 8.8E-05 40.7 7.1 80 253-347 159-254 (319)
21 3on7_A Oxidoreductase, iron/as 80.5 2.5 8.7E-05 40.0 6.2 80 253-347 154-255 (280)
22 1dcs_A Deacetoxycephalosporin 79.8 2.7 9.1E-05 40.4 6.1 81 253-347 161-268 (311)
23 3oox_A Putative 2OG-Fe(II) oxy 77.1 3.4 0.00012 39.5 6.0 80 253-347 173-272 (312)
24 1odm_A Isopenicillin N synthas 75.9 3.3 0.00011 40.0 5.6 70 261-347 208-289 (331)
25 3rcq_A Aspartyl/asparaginyl be 71.4 5 0.00017 36.8 5.3 78 251-344 104-181 (197)
26 1r26_A Thioredoxin; redox-acti 69.7 1.6 5.6E-05 35.4 1.5 50 323-372 3-58 (125)
27 1ilo_A Conserved hypothetical 44.1 6.6 0.00023 28.0 0.8 13 359-371 7-19 (77)
28 1oih_A Putative alkylsulfatase 39.1 73 0.0025 29.6 7.3 32 261-292 102-139 (301)
29 1nho_A Probable thioredoxin; b 38.2 10 0.00034 27.3 1.0 12 360-371 10-21 (85)
30 2ozj_A Cupin 2, conserved barr 37.8 87 0.003 24.2 6.6 34 311-345 78-111 (114)
31 1fo5_A Thioredoxin; disulfide 35.3 12 0.0004 26.9 0.9 12 360-371 11-22 (85)
32 2voc_A Thioredoxin; electron t 32.2 16 0.00054 28.2 1.3 13 360-372 26-38 (112)
33 4i4a_A Similar to unknown prot 32.0 1.1E+02 0.0038 23.9 6.5 41 311-351 74-114 (128)
34 3die_A Thioredoxin, TRX; elect 31.6 11 0.00039 28.0 0.4 11 361-371 29-39 (106)
35 2vim_A Thioredoxin, TRX; thior 31.4 11 0.00038 28.0 0.3 12 360-371 28-39 (104)
36 1mek_A Protein disulfide isome 30.5 15 0.00052 27.8 0.9 13 360-372 33-45 (120)
37 1otj_A Alpha-ketoglutarate-dep 29.5 1.8E+02 0.0061 26.5 8.3 42 251-292 82-130 (283)
38 3kp8_A Vkorc1/thioredoxin doma 29.4 13 0.00043 29.6 0.3 13 359-371 20-32 (106)
39 1fb6_A Thioredoxin M; electron 29.1 13 0.00044 27.7 0.3 12 361-372 28-39 (105)
40 3tco_A Thioredoxin (TRXA-1); d 28.9 13 0.00045 27.8 0.3 12 360-371 30-41 (109)
41 1nx8_A CARC, carbapenem syntha 28.9 25 0.00086 32.1 2.3 31 262-292 96-134 (273)
42 2djj_A PDI, protein disulfide- 28.9 15 0.00051 28.4 0.6 11 361-371 35-45 (121)
43 3d6i_A Monothiol glutaredoxin- 28.6 15 0.0005 28.0 0.5 12 360-371 30-41 (112)
44 2pu9_C TRX-F, thioredoxin F-ty 28.5 13 0.00046 28.3 0.3 13 360-372 33-45 (111)
45 2dbn_A Hypothetical protein YB 28.1 49 0.0017 34.1 4.4 46 311-372 369-414 (461)
46 3uvt_A Thioredoxin domain-cont 28.1 14 0.00048 27.8 0.3 11 360-370 30-40 (111)
47 1xvw_A Hypothetical protein RV 27.9 23 0.0008 28.7 1.7 22 334-369 34-55 (160)
48 1faa_A Thioredoxin F; electron 27.9 14 0.00048 28.8 0.3 13 360-372 46-58 (124)
49 2dml_A Protein disulfide-isome 27.8 20 0.00067 28.1 1.2 12 361-372 45-56 (130)
50 3m9j_A Thioredoxin; oxidoreduc 27.6 14 0.00049 27.5 0.3 12 360-371 29-40 (105)
51 2e0q_A Thioredoxin; electron t 27.4 15 0.0005 27.1 0.3 12 360-371 25-36 (104)
52 1nsw_A Thioredoxin, TRX; therm 27.0 15 0.00051 27.5 0.3 11 361-371 27-37 (105)
53 2kuc_A Putative disulphide-iso 26.9 16 0.00055 28.6 0.5 12 360-371 36-47 (130)
54 2trx_A Thioredoxin; electron t 26.5 15 0.00053 27.6 0.3 12 361-372 30-41 (108)
55 1ep7_A Thioredoxin CH1, H-type 26.5 15 0.00053 27.8 0.3 13 360-372 33-45 (112)
56 1thx_A Thioredoxin, thioredoxi 26.2 18 0.0006 27.4 0.6 11 361-371 35-45 (115)
57 3f3q_A Thioredoxin-1; His TAG, 26.1 16 0.00054 28.2 0.3 11 361-371 34-44 (109)
58 1dby_A Chloroplast thioredoxin 26.0 16 0.00054 27.4 0.3 12 360-371 28-39 (107)
59 2lja_A Putative thiol-disulfid 25.9 23 0.00078 28.3 1.2 11 361-371 40-50 (152)
60 2xc2_A Thioredoxinn; oxidoredu 25.9 16 0.00055 28.2 0.3 12 360-371 42-53 (117)
61 1t00_A Thioredoxin, TRX; redox 25.9 16 0.00055 27.7 0.3 11 361-371 33-43 (112)
62 2yzu_A Thioredoxin; redox prot 25.7 16 0.00056 27.1 0.3 11 361-371 28-38 (109)
63 1xwb_A Thioredoxin; dimerizati 25.5 17 0.00057 27.1 0.3 12 360-371 29-40 (106)
64 1zzo_A RV1677; thioredoxin fol 25.4 17 0.00057 28.1 0.3 11 361-371 35-45 (136)
65 1gh2_A Thioredoxin-like protei 25.3 17 0.00057 27.6 0.3 12 360-371 30-41 (107)
66 1zma_A Bacterocin transport ac 25.3 17 0.00057 28.3 0.3 12 360-371 38-49 (118)
67 2l6c_A Thioredoxin; oxidoreduc 25.2 19 0.00065 27.8 0.6 11 361-371 29-39 (110)
68 3hcz_A Possible thiol-disulfid 25.0 22 0.00075 28.0 0.9 11 361-371 41-51 (148)
69 1syr_A Thioredoxin; SGPP, stru 24.7 17 0.00059 27.9 0.3 13 360-372 35-47 (112)
70 4euy_A Uncharacterized protein 24.3 24 0.00082 26.7 1.0 10 361-370 28-37 (105)
71 1wmj_A Thioredoxin H-type; str 24.3 22 0.00075 27.7 0.8 13 360-372 45-57 (130)
72 1x5e_A Thioredoxin domain cont 24.3 18 0.00061 28.3 0.3 12 361-372 32-43 (126)
73 2yj7_A LPBCA thioredoxin; oxid 30.1 16 0.00055 26.9 0.0 11 361-371 29-39 (106)
74 2k8s_A Thioredoxin; dimer, str 24.2 17 0.00057 26.7 0.1 12 360-371 9-20 (80)
75 3fkf_A Thiol-disulfide oxidore 24.1 23 0.00078 27.9 0.9 10 361-370 43-52 (148)
76 3aps_A DNAJ homolog subfamily 24.1 18 0.00062 28.0 0.3 12 360-371 30-41 (122)
77 1lu4_A Soluble secreted antige 24.1 18 0.00062 28.0 0.3 11 361-371 34-44 (136)
78 3hxs_A Thioredoxin, TRXP; elec 24.0 20 0.0007 28.5 0.6 11 361-371 61-71 (141)
79 3gnj_A Thioredoxin domain prot 23.9 18 0.00063 27.2 0.3 11 360-370 31-41 (111)
80 3ul3_B Thioredoxin, thioredoxi 23.8 19 0.00063 28.6 0.3 12 361-372 52-63 (128)
81 2j23_A Thioredoxin; immune pro 23.7 21 0.00071 28.1 0.6 12 360-371 42-53 (121)
82 3qfa_C Thioredoxin; protein-pr 23.6 19 0.00064 28.2 0.3 12 360-371 40-51 (116)
83 1w4v_A Thioredoxin, mitochondr 23.4 19 0.00065 28.1 0.3 11 361-371 41-51 (119)
84 2i4a_A Thioredoxin; acidophIle 23.3 19 0.00066 26.8 0.3 11 361-371 30-40 (107)
85 2dj0_A Thioredoxin-related tra 23.2 25 0.00085 28.2 1.0 13 360-372 35-47 (137)
86 2oe3_A Thioredoxin-3; electron 23.2 19 0.00066 28.2 0.3 13 360-372 39-51 (114)
87 2dj3_A Protein disulfide-isome 23.2 21 0.00071 28.1 0.5 12 361-372 35-46 (133)
88 3fk8_A Disulphide isomerase; A 23.1 19 0.00066 28.4 0.3 13 360-372 38-50 (133)
89 3or5_A Thiol:disulfide interch 23.1 19 0.00066 29.1 0.3 12 361-372 44-55 (165)
90 2l57_A Uncharacterized protein 23.0 20 0.00067 28.1 0.3 11 361-371 36-46 (126)
91 1x5d_A Protein disulfide-isome 22.9 20 0.00068 28.0 0.3 12 361-372 35-46 (133)
92 2fwh_A Thiol:disulfide interch 22.8 20 0.00068 28.8 0.3 10 360-369 40-49 (134)
93 1yhf_A Hypothetical protein SP 22.8 1.5E+02 0.0053 22.5 5.6 32 311-343 80-111 (115)
94 2f51_A Thioredoxin; electron t 22.8 20 0.00068 28.2 0.3 12 360-371 32-43 (118)
95 3erw_A Sporulation thiol-disul 22.7 20 0.00069 28.0 0.3 11 361-371 44-54 (145)
96 4evm_A Thioredoxin family prot 22.7 20 0.0007 27.3 0.3 10 361-370 32-41 (138)
97 1kng_A Thiol:disulfide interch 22.7 20 0.00068 28.7 0.3 10 361-370 52-61 (156)
98 1xfl_A Thioredoxin H1; AT3G510 22.6 20 0.00069 28.5 0.3 14 359-372 46-59 (124)
99 2l5l_A Thioredoxin; structural 22.4 20 0.00069 28.7 0.3 11 361-371 48-58 (136)
100 2e7p_A Glutaredoxin; thioredox 22.4 19 0.00066 27.8 0.1 12 360-371 27-38 (116)
101 1ti3_A Thioredoxin H, PTTRXH1; 22.3 21 0.00071 27.0 0.3 12 360-371 35-46 (113)
102 2vlu_A Thioredoxin, thioredoxi 22.0 21 0.00072 27.6 0.3 12 360-371 43-54 (122)
103 2dj1_A Protein disulfide-isome 21.7 22 0.00076 28.2 0.4 12 361-372 44-55 (140)
104 2b5x_A YKUV protein, TRXY; thi 21.7 22 0.00074 27.9 0.3 10 361-370 39-48 (148)
105 3h79_A Thioredoxin-like protei 21.6 22 0.00074 28.1 0.3 11 361-371 43-53 (127)
106 2vm1_A Thioredoxin, thioredoxi 21.6 22 0.00074 27.1 0.3 12 360-371 37-48 (118)
107 3ewl_A Uncharacterized conserv 21.6 19 0.00064 28.5 -0.1 10 361-370 37-46 (142)
108 3raz_A Thioredoxin-related pro 21.4 22 0.00075 28.7 0.3 11 361-371 34-44 (151)
109 2opk_A Hypothetical protein; p 21.1 2.4E+02 0.0081 22.1 6.5 33 311-343 75-109 (112)
110 2ju5_A Thioredoxin disulfide i 20.7 23 0.00079 29.3 0.3 12 360-371 57-68 (154)
111 1i5g_A Tryparedoxin II; electr 20.6 23 0.0008 28.2 0.3 10 361-370 38-47 (144)
112 3d22_A TRXH4, thioredoxin H-ty 20.5 24 0.00081 28.1 0.3 12 360-371 55-66 (139)
113 2lus_A Thioredoxion; CR-Trp16, 25.8 21 0.00073 28.0 0.0 11 361-371 36-46 (143)
114 2i1u_A Thioredoxin, TRX, MPT46 20.3 24 0.00082 27.0 0.3 12 361-372 40-51 (121)
115 3eur_A Uncharacterized protein 20.2 25 0.00084 28.1 0.3 11 361-371 41-51 (142)
116 3ha9_A Uncharacterized thiored 20.2 27 0.00092 28.5 0.6 10 361-370 47-56 (165)
117 2o8v_B Thioredoxin 1; disulfid 20.1 24 0.00084 28.2 0.3 13 360-372 49-61 (128)
No 1
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.71 E-value=2e-17 Score=157.36 Aligned_cols=160 Identities=16% Similarity=0.295 Sum_probs=109.7
Q ss_pred CcEEEee-cCCHHHHHHHHHHHHhhhhhhhcccc-cccccCCCCcccccccccchH-HHHHHHHHHHhhhhhhhhccccc
Q 016136 166 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF-RIMRPNTMNKYGAVLDDFGLE-TMLDKLMETYIRPLSKVFFAEVG 242 (394)
Q Consensus 166 P~Vy~fp-vfspefC~~LIeE~E~f~~Ws~gs~~-~i~rPn~mN~ygvvLddiGl~-~~~~~Ll~~yl~PL~~~LfPe~~ 242 (394)
+.++.+| |||+++|++||+.++.- .|..+... ...-....||..+..++. +. .+++.+.. .+.. . |.+.
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t~g~~~~~vr~n~~l~~d~~-~~~~l~~~i~~-~l~~---~--~~f~ 90 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQTSGAMATTRKRNQQLDKDDP-VAVALGQQIMD-RLLA---H--PQFV 90 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCCSSBSSCCCEEEEECCTTCH-HHHHHHHHHHH-HHHT---C--HHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC-CCccCcccCCCccccceeeeEECCCCH-HHHHHHHHHHH-HHcc---C--cchh
Confidence 6788886 99999999999999852 35432211 111123345544544443 33 33433332 2211 0 0111
Q ss_pred CCCCc--ccceeEEEEeCCCCCCCcccccCC-----------ceeEEEeccc--cccCcceEEccccccccccCCCCccc
Q 016136 243 GSTLD--SHHGFVVEYGKDRDVDLGFHVDDS-----------EVTLNVCLGK--QFTGGELFFRGTRCEKHVNTGSQTEE 307 (394)
Q Consensus 243 g~~Ld--sh~~FVVrY~~~~d~~L~~H~D~S-----------evTLNI~Ln~--dFeGGgl~F~~~~c~~hv~~~~~~~e 307 (394)
...|. .....+.+|.+|+ .+++|+|.+ .+|+.++||+ +|+||+|.|.....
T Consensus 91 ~~~L~~~~e~~~~~rY~~G~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~------------ 156 (243)
T 3dkq_A 91 SAALPLQFYPPLFNRYQGGE--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYG------------ 156 (243)
T ss_dssp HHHCEEEEEEEEEEEECTTC--EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTE------------
T ss_pred hcccccccccceEEEECCCC--eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCC------------
Confidence 11121 2234589999986 999999963 5899999998 99999999996432
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCccceeEEEeecchh
Q 016136 308 IFDYSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSS 347 (394)
Q Consensus 308 ~~~~~~~~G~AlLHpGrh~HeglpVTsG~RynLV~W~rss 347 (394)
...+.|++|.+|+|++..+|+|.|||+|+||+++.|++|.
T Consensus 157 ~~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 157 QQSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM 196 (243)
T ss_dssp EEEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEES
T ss_pred cEEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhc
Confidence 1347899999999999999999999999999999999975
No 2
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.70 E-value=2.7e-17 Score=152.14 Aligned_cols=174 Identities=15% Similarity=0.207 Sum_probs=110.7
Q ss_pred CCcEEEee-cCCHHHHHHHHHHHHh-hhh--hhhcccccccccCCCCcccccccccchHHHHHHHHHHHhhhhhhhhccc
Q 016136 165 SPGVFTFE-MLQPRFCELLLAEVEN-FEK--WVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAE 240 (394)
Q Consensus 165 ~P~Vy~fp-vfspefC~~LIeE~E~-f~~--Ws~gs~~~i~rPn~mN~ygvvLddiGl~~~~~~Ll~~yl~PL~~~LfPe 240 (394)
.|.|+.++ |||+++|+.||+.++. +.. |..+..-.....+.++...+.+++- -+.....+. +.|..++. .|
T Consensus 19 ~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~-~~~~~~~i~-~ri~~~~g--l~- 93 (224)
T 2jig_A 19 SPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKG-EDSVISKIE-KRVAQVTM--IP- 93 (224)
T ss_dssp TTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTT-CSHHHHHHH-HHHHHHHT--CC-
T ss_pred CCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCC-CCHHHHHHH-HHHHHHhC--CC-
Confidence 58899996 9999999999999985 221 2111100001123344444555431 122222222 22322211 11
Q ss_pred ccCCCCcccceeEEEEeCCCCCCCcccccCC--------------ceeEEEeccccccCcceEEcccccccc--ccCCCC
Q 016136 241 VGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS--------------EVTLNVCLGKQFTGGELFFRGTRCEKH--VNTGSQ 304 (394)
Q Consensus 241 ~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S--------------evTLNI~Ln~dFeGGgl~F~~~~c~~h--v~~~~~ 304 (394)
+ .... ..-|++|.+++ ++.+|+|.. .+|+.|+||+..+||+|.|......+. .-++ .
T Consensus 94 ~---~~~e-~~qv~rY~~G~--~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~-c 166 (224)
T 2jig_A 94 L---ENHE-GLQVLHYHDGQ--KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSE-C 166 (224)
T ss_dssp G---GGBC-CCEEEEEETTC--CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCT-T
T ss_pred c---cccc-ceEEEecCCCc--cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccc-c
Confidence 0 1111 23479999987 899999942 389999999999999999986530000 0000 0
Q ss_pred ccceeeecCCCceEEEecC---------CCCcCCccCCccceeEEEeecchhHHH
Q 016136 305 TEEIFDYSHVPGRAVLHRG---------RHRHGARATTSGHRVNLLLWCRSSVFR 350 (394)
Q Consensus 305 ~~e~~~~~~~~G~AlLHpG---------rh~HeglpVTsG~RynLV~W~rss~~R 350 (394)
.+..+.+.|++|.||+|+. +.+|+|.||++|+||++..|+++..||
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcC
Confidence 0124678999999999986 799999999999999999999987665
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.70 E-value=4.1e-17 Score=152.55 Aligned_cols=156 Identities=21% Similarity=0.278 Sum_probs=107.3
Q ss_pred CCcEEEee-cCCHHHHHHHHHHHHh-hhhhhhcccccccccCCCCcccccccccchHHHHHHHHHHHhhhhhhhhccccc
Q 016136 165 SPGVFTFE-MLQPRFCELLLAEVEN-FEKWVNEAKFRIMRPNTMNKYGAVLDDFGLETMLDKLMETYIRPLSKVFFAEVG 242 (394)
Q Consensus 165 ~P~Vy~fp-vfspefC~~LIeE~E~-f~~Ws~gs~~~i~rPn~mN~ygvvLddiGl~~~~~~Ll~~yl~PL~~~LfPe~~ 242 (394)
.|.|+.++ |||+++|+.||+..+. +....-+.+ ......++..++-|++ +.....+. +.|..++.. | ..
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~--~~~~~~RtS~~~wl~~---~~~v~~i~-~Ri~~~~gl--~-~~ 108 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS--RDVNDIRTSSGAFLDD---NELTAKIE-KRISSIMNV--P-AS 108 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHHHC----------CCCCGGGTTCEECCC---CHHHHHHH-HHHHHHHTS--C-GG
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhcccccceeccC--CccCCcEeeeeEEeCC---cHHHHHHH-HHHHHhcCc--e-ec
Confidence 69999997 9999999999999885 433100011 0112223344556666 22222222 223332211 1 00
Q ss_pred CCCCcccceeEEEEeCCCCCCCcccccCC-----------ceeEEEeccccccCcceEEccccccccccCCCCccceeee
Q 016136 243 GSTLDSHHGFVVEYGKDRDVDLGFHVDDS-----------EVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDY 311 (394)
Q Consensus 243 g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S-----------evTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~ 311 (394)
..-...|++|.+++ .+.+|+|.. .+|+.++||+.++||+|.|..... .+
T Consensus 109 ----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~--------------~V 168 (216)
T 3itq_A 109 ----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNL--------------SV 168 (216)
T ss_dssp ----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTE--------------EE
T ss_pred ----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCC--------------EE
Confidence 01123489999986 899999954 289999999999999999986542 36
Q ss_pred cCCCceEEEecC---------CCCcCCccCCccceeEEEeecchhHH
Q 016136 312 SHVPGRAVLHRG---------RHRHGARATTSGHRVNLLLWCRSSVF 349 (394)
Q Consensus 312 ~~~~G~AlLHpG---------rh~HeglpVTsG~RynLV~W~rss~~ 349 (394)
.|++|.||+|+. +.+|+|.||++|+||++..|+|...|
T Consensus 169 ~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~ 215 (216)
T 3itq_A 169 HPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTY 215 (216)
T ss_dssp CCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCC
T ss_pred ecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCc
Confidence 899999999998 79999999999999999999998654
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.25 E-value=8.8e-11 Score=111.33 Aligned_cols=169 Identities=18% Similarity=0.218 Sum_probs=105.9
Q ss_pred CcEEEee-cCCHHHHHHHHHHHHhhhh---hhhccccccccc------CCCCccccccccc--chHH--HHHHHHHHHhh
Q 016136 166 PGVFTFE-MLQPRFCELLLAEVENFEK---WVNEAKFRIMRP------NTMNKYGAVLDDF--GLET--MLDKLMETYIR 231 (394)
Q Consensus 166 P~Vy~fp-vfspefC~~LIeE~E~f~~---Ws~gs~~~i~rP------n~mN~ygvvLddi--Gl~~--~~~~Ll~~yl~ 231 (394)
++++.++ +|++++|+.|+++++.... +.. ..+.+. ..++..-.-++.- .... .+...++..+.
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~---a~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTD---GQLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCS---CCEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccc---cccccccccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 5778886 9999999999999997431 110 111111 1111111112221 1221 23334443333
Q ss_pred hhhhhhcccccCCCCc-ccceeEEEEeCCCCCCCcccccCC-----ceeEEEecccc----ccCcceEEccccccccccC
Q 016136 232 PLSKVFFAEVGGSTLD-SHHGFVVEYGKDRDVDLGFHVDDS-----EVTLNVCLGKQ----FTGGELFFRGTRCEKHVNT 301 (394)
Q Consensus 232 PL~~~LfPe~~g~~Ld-sh~~FVVrY~~~~d~~L~~H~D~S-----evTLNI~Ln~d----FeGGgl~F~~~~c~~hv~~ 301 (394)
-+... .+...++ ....-+.+|.+ .+.++.+|.|.. .+|+.++||++ +.||+|.|.....
T Consensus 103 ~ln~~----lGl~~i~~~~e~~~~~Y~~-~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~------ 171 (247)
T 2hbt_A 103 HCNGK----LGSYKINGRTKAMVACYPG-NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK------ 171 (247)
T ss_dssp HTTTT----STTCCEEEECCEEEEEECS-SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC------
T ss_pred HHhhh----cCcccccccceEEEEEecC-CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC------
Confidence 22221 1111111 11234789986 234999999973 59999999985 4599999875321
Q ss_pred CCCccceeeecCCCceEEEecCC--CCcCCccCCccceeEEEeecchhHHHHHH
Q 016136 302 GSQTEEIFDYSHVPGRAVLHRGR--HRHGARATTSGHRVNLLLWCRSSVFREMK 353 (394)
Q Consensus 302 ~~~~~e~~~~~~~~G~AlLHpGr--h~HeglpVTsG~RynLV~W~rss~~R~~~ 353 (394)
+....+.|+.|.+|+|... ..|+++| +.|+||.+..|++....|...
T Consensus 172 ----~~~~~v~P~~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~a 220 (247)
T 2hbt_A 172 ----AQFADIEPKFDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERARA 220 (247)
T ss_dssp ----SSCEEECCBTTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHHH
T ss_pred ----CceEEEEcCCCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhhh
Confidence 1345689999999999976 7999999 679999999999999888643
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=98.07 E-value=3.2e-05 Score=82.13 Aligned_cols=198 Identities=15% Similarity=0.147 Sum_probs=124.4
Q ss_pred cccCCchhHHHhccccHHhhhhhccccCCcEEEeecCCHHHHHHHHHHHHhhhhhhhcccccc---cccCCCCc-ccccc
Q 016136 138 GNFFVPPFVKAIQDNTEESFRSIISEPSPGVFTFEMLQPRFCELLLAEVENFEKWVNEAKFRI---MRPNTMNK-YGAVL 213 (394)
Q Consensus 138 e~~l~p~f~~ai~~~~~~~~~~i~~ep~P~Vy~fpvfspefC~~LIeE~E~f~~Ws~gs~~~i---~rPn~mN~-ygvvL 213 (394)
..++.+.|.+.++... .-..|.|-+..=.+|++++-+.+.+|+..--.|.. ...++ .......+ -+..-
T Consensus 13 ~~~~~~~~~~~lk~~y------~~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~-KetDlYk~~QsgdLanl~~l~~ 85 (633)
T 3kt7_A 13 PKIWDKTFQDGLKKEI------EDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTK-KETDIYRVNQSGDLANLSGLDW 85 (633)
T ss_dssp GGGGCHHHHHHHHHHH------HTCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEE-EECSSEEEEECCCTTCTTSCCT
T ss_pred hhhcCHHHHHHHHhhh------hcCCCcceEEECCCCCHHHHHHHHHHhhhccCccc-ccccccceeccccccccccCCh
Confidence 3477777887777642 23679999888899999999999999874223321 11111 11111111 11122
Q ss_pred cccchHHHHHHHHHHHhhhhhhhhcccccCC-CCc--ccceeEEEEeCCCCCCCcccccCC---ceeEEEeccc-c----
Q 016136 214 DDFGLETMLDKLMETYIRPLSKVFFAEVGGS-TLD--SHHGFVVEYGKDRDVDLGFHVDDS---EVTLNVCLGK-Q---- 282 (394)
Q Consensus 214 ddiGl~~~~~~Ll~~yl~PL~~~LfPe~~g~-~Ld--sh~~FVVrY~~~~d~~L~~H~D~S---evTLNI~Ln~-d---- 282 (394)
+++..-..|..|++...++-.+.+.-.+.|. .|. ....-+.+|.+|. ++..|.|.. .+|+-++||+ +
T Consensus 86 e~l~~lp~l~~Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~--fL~~H~D~~~~RrvS~VLYLN~pd~~W~ 163 (633)
T 3kt7_A 86 DDLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC--HLLTHDDVIGSRRISFILYLPDPDRKWK 163 (633)
T ss_dssp TCCTTCHHHHHHHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTC--EEEEECCCCTTEEEEEEEECSCTTSCCC
T ss_pred hhhccChHHHHHHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCCCC--eeeecCCCCCCeEEEEEEEcCCCCCCCC
Confidence 2333324455555544444433344333332 331 1233467898776 999999964 4999999997 4
Q ss_pred -ccCcceEEccccccccccCCCCccceeeecCCCceEEEecC---CCCcCCccCC-ccceeEEEeecchhH
Q 016136 283 -FTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRG---RHRHGARATT-SGHRVNLLLWCRSSV 348 (394)
Q Consensus 283 -FeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpG---rh~HeglpVT-sG~RynLV~W~rss~ 348 (394)
..||+|.+....... . ...+....+.|.-|+.++|.- ...|++.+|+ ...|+.+.+|+|...
T Consensus 164 ~e~GGeL~Lyd~d~~~---~-P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 164 SHYGGGLRLFPSILPN---V-PHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp GGGBCCEEECCEEETT---E-ECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred ccCCceEEEecCCCcC---C-CCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 569999998644210 0 001234567899999999984 5999999998 566999999999864
No 6
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.65 E-value=0.00089 Score=62.56 Aligned_cols=87 Identities=18% Similarity=0.173 Sum_probs=59.5
Q ss_pred CCCCcccccCC-------ceeEEEeccc-cccCcceEEcccccc----cc----------------ccCC-CCccceeee
Q 016136 261 DVDLGFHVDDS-------EVTLNVCLGK-QFTGGELFFRGTRCE----KH----------------VNTG-SQTEEIFDY 311 (394)
Q Consensus 261 d~~L~~H~D~S-------evTLNI~Ln~-dFeGGgl~F~~~~c~----~h----------------v~~~-~~~~e~~~~ 311 (394)
+....+|.|.. .+|+.|+|.+ .=+.|.|.|....-. .+ +..+ ........+
T Consensus 134 g~~~~wHqD~~~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 213 (288)
T 2rdq_A 134 HYLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHS 213 (288)
T ss_dssp TTSCCSBCHHHHSCSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECC
T ss_pred CCCcCccccccccCCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeec
Confidence 45789999953 5789999976 456777877632110 00 0000 011233556
Q ss_pred cCCCceEEEecCCCCcCCccCCcc----ceeEEEeecchh
Q 016136 312 SHVPGRAVLHRGRHRHGARATTSG----HRVNLLLWCRSS 347 (394)
Q Consensus 312 ~~~~G~AlLHpGrh~HeglpVTsG----~RynLV~W~rss 347 (394)
..++|.+|+|.+..+|++.+-++. .|+.++.|....
T Consensus 214 ~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 214 PMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 789999999999999999998876 379999988765
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.60 E-value=0.0014 Score=62.17 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=55.7
Q ss_pred CcccccCC---------ceeEEEeccc-cccCcceEEccccccc----c---------------ccCCCCccceeeecCC
Q 016136 264 LGFHVDDS---------EVTLNVCLGK-QFTGGELFFRGTRCEK----H---------------VNTGSQTEEIFDYSHV 314 (394)
Q Consensus 264 L~~H~D~S---------evTLNI~Ln~-dFeGGgl~F~~~~c~~----h---------------v~~~~~~~e~~~~~~~ 314 (394)
..+|.|.+ .+|+.|+|.+ .=+.|.|.|....-.. + +...........+..+
T Consensus 142 ~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 221 (308)
T 2a1x_A 142 HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVME 221 (308)
T ss_dssp -CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBC
T ss_pred CCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCC
Confidence 68999954 3788899975 4567788886422110 0 0000011345667889
Q ss_pred CceEEEecCCCCcCCccCCc-cceeEEEeecchh
Q 016136 315 PGRAVLHRGRHRHGARATTS-GHRVNLLLWCRSS 347 (394)
Q Consensus 315 ~G~AlLHpGrh~HeglpVTs-G~RynLV~W~rss 347 (394)
+|.+++|.++.+|++.+-++ ..|.++++.....
T Consensus 222 aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 222 KGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASA 255 (308)
T ss_dssp TTCEEEECTTCCEEECCBCSSSCEEEEEEEEEET
T ss_pred CccEEEECCCccccCCCCCCCCceEEEEEEEECC
Confidence 99999999999999999755 6688887755543
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.59 E-value=0.00049 Score=63.67 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=68.1
Q ss_pred ceeEEEEeCCCCCCCccccc-CCceeEEEeccccccCcceEEccccccccccC-----CCC--ccceeeecCCCceEEEe
Q 016136 250 HGFVVEYGKDRDVDLGFHVD-DSEVTLNVCLGKQFTGGELFFRGTRCEKHVNT-----GSQ--TEEIFDYSHVPGRAVLH 321 (394)
Q Consensus 250 ~~FVVrY~~~~d~~L~~H~D-~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~-----~~~--~~e~~~~~~~~G~AlLH 321 (394)
...++.|.++. ....|.| ++.+|..++|+..-.||+|.|...+....+.. +.. ......+.|++|..|||
T Consensus 104 ~~W~~~~~~G~--~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGG--VHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTC--CEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCC--cccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 46789998876 8889999 57899999998666799999986432100000 000 02334679999999999
Q ss_pred cCCCCcCCccCCc-cceeEEEeec
Q 016136 322 RGRHRHGARATTS-GHRVNLLLWC 344 (394)
Q Consensus 322 pGrh~HeglpVTs-G~RynLV~W~ 344 (394)
|+...|++.|..+ +.|+.+-.-+
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEEEe
Confidence 9999999999886 6788765443
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.35 E-value=0.0028 Score=59.38 Aligned_cols=89 Identities=16% Similarity=0.157 Sum_probs=58.4
Q ss_pred CCCCCCCcccccCC---------ceeEEEeccc-cccCcceEEccccccccc-----cC---------------CCCccc
Q 016136 258 KDRDVDLGFHVDDS---------EVTLNVCLGK-QFTGGELFFRGTRCEKHV-----NT---------------GSQTEE 307 (394)
Q Consensus 258 ~~~d~~L~~H~D~S---------evTLNI~Ln~-dFeGGgl~F~~~~c~~hv-----~~---------------~~~~~e 307 (394)
|+.+....+|.|.+ .+|+.|+|.+ .=++|.|.|....-...+ .. ......
T Consensus 147 Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 147 PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp TTTBCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCCCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 55555689999963 5888889975 456778887632110000 00 001234
Q ss_pred eeeecCCCceEEEecCCCCcCCccCCcc-ceeEEEeecch
Q 016136 308 IFDYSHVPGRAVLHRGRHRHGARATTSG-HRVNLLLWCRS 346 (394)
Q Consensus 308 ~~~~~~~~G~AlLHpGrh~HeglpVTsG-~RynLV~W~rs 346 (394)
...+..++|.+|+|.|+.+|++.+-++. .|.++++-...
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~ 266 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLME 266 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEE
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEc
Confidence 5667889999999999999999987764 57777654433
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.18 E-value=0.0052 Score=58.24 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=32.8
Q ss_pred ceeeecCCCceEEEecCCCCcCCccCC--c-cceeEEEeecchhH
Q 016136 307 EIFDYSHVPGRAVLHRGRHRHGARATT--S-GHRVNLLLWCRSSV 348 (394)
Q Consensus 307 e~~~~~~~~G~AlLHpGrh~HeglpVT--s-G~RynLV~W~rss~ 348 (394)
....+..++|.+++|.+..+|++.+-+ + ..|.++++-..+..
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~ 262 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSF 262 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETT
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCC
Confidence 455678899999999999999999987 4 45877766555443
No 11
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.97 E-value=0.0052 Score=59.51 Aligned_cols=41 Identities=17% Similarity=0.263 Sum_probs=30.8
Q ss_pred ceeeecCCCceEEEecCCCCcCCccCC--ccc-eeEEEeecchh
Q 016136 307 EIFDYSHVPGRAVLHRGRHRHGARATT--SGH-RVNLLLWCRSS 347 (394)
Q Consensus 307 e~~~~~~~~G~AlLHpGrh~HeglpVT--sG~-RynLV~W~rss 347 (394)
+...+..++|.+|+|.|+.+|++.+-+ +.. |.++++-....
T Consensus 220 ~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~ 263 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPT 263 (319)
T ss_dssp -CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEET
T ss_pred ceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECC
Confidence 455567899999999999999999887 554 77776544443
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=96.81 E-value=0.0044 Score=59.90 Aligned_cols=175 Identities=14% Similarity=0.224 Sum_probs=88.7
Q ss_pred CcEEEee-cCCHHHHHHHHHHHHhhhhhhh--cccccccccCCCCcccccccccchHHHHHHHH-HHHhhhhhhhhcccc
Q 016136 166 PGVFTFE-MLQPRFCELLLAEVENFEKWVN--EAKFRIMRPNTMNKYGAVLDDFGLETMLDKLM-ETYIRPLSKVFFAEV 241 (394)
Q Consensus 166 P~Vy~fp-vfspefC~~LIeE~E~f~~Ws~--gs~~~i~rPn~mN~ygvvLddiGl~~~~~~Ll-~~yl~PL~~~LfPe~ 241 (394)
.|...++ +|+++.|+.|.++++....... +....+..+.. ....-+++-......+..|+ ...|..+++.|+
T Consensus 46 dGyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~f~~l~~~p~l~~i~~~ll--- 121 (310)
T 3emr_A 46 NGFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES-NDIRSIFHVHQDDNYFQDVANDKRILDIVRHLL--- 121 (310)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT-CCEEEEECHHHHCHHHHHHHTCHHHHHHHHHHH---
T ss_pred CCEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC-cceeEEeehhhccHHHHHHHhChHHHHHHHHHc---
Confidence 3766775 9999999999999997644211 11111111111 01011111001112222222 122333333333
Q ss_pred cCCCCcccceeEEEEeC-CCCCCCcccccCC------------ceeEEEeccc-cccCcceEEccccccccc----cCCC
Q 016136 242 GGSTLDSHHGFVVEYGK-DRDVDLGFHVDDS------------EVTLNVCLGK-QFTGGELFFRGTRCEKHV----NTGS 303 (394)
Q Consensus 242 ~g~~Ldsh~~FVVrY~~-~~d~~L~~H~D~S------------evTLNI~Ln~-dFeGGgl~F~~~~c~~hv----~~~~ 303 (394)
|..+--+.. .+-+.+ +.+....+|.|.+ .+|+.|+|.+ .=+.|.|.|....-...+ ....
T Consensus 122 -G~~~~l~~s-~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~ 199 (310)
T 3emr_A 122 -GSDVYVHQS-RINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPD 199 (310)
T ss_dssp -TSCEEEEEE-EEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC----
T ss_pred -CCceEEEee-EEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCcccccccccc
Confidence 221111111 122333 3456789999942 4888999975 356777877532111000 0000
Q ss_pred -------------Cc-----------cc-eeeecCCCceEEEecCCCCcCCccCCcc-ceeEEEeecch
Q 016136 304 -------------QT-----------EE-IFDYSHVPGRAVLHRGRHRHGARATTSG-HRVNLLLWCRS 346 (394)
Q Consensus 304 -------------~~-----------~e-~~~~~~~~G~AlLHpGrh~HeglpVTsG-~RynLV~W~rs 346 (394)
.+ .. +..+..++|.+++|.|+.+|++.+-++. .|.++++-..+
T Consensus 200 ~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~ 268 (310)
T 3emr_A 200 NNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNS 268 (310)
T ss_dssp -------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEEEE
T ss_pred cccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEEeC
Confidence 00 01 4556779999999999999999886654 47666544443
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=95.49 E-value=0.067 Score=52.95 Aligned_cols=173 Identities=11% Similarity=0.105 Sum_probs=90.4
Q ss_pred CcEEEee-cCCHHHHHHHHHHHHhhhhhhhcccc--cccccCCCCcccc--cccccchHHHHHHHHHHHhhhhhhhhccc
Q 016136 166 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF--RIMRPNTMNKYGA--VLDDFGLETMLDKLMETYIRPLSKVFFAE 240 (394)
Q Consensus 166 P~Vy~fp-vfspefC~~LIeE~E~f~~Ws~gs~~--~i~rPn~mN~ygv--vLddiGl~~~~~~Ll~~yl~PL~~~LfPe 240 (394)
.|-.+++ ||++++-+.|.++++...+-...++. .|+-|..-.=.-+ -.|+++.. ++..+..++...+-+-
T Consensus 40 eGYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h-----~~s~l~~rll~vl~~L 114 (344)
T 3nnf_A 40 KGYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYD-----FVSSFIQEKLALLNYI 114 (344)
T ss_dssp HSEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHH-----HHHHHHGGGHHHHHHH
T ss_pred CceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHH-----HHHHHHHHHHHHHHHH
Confidence 3555665 99999999999999987542111111 1111111000000 02334443 1112222333333322
Q ss_pred ccCCCCcccceeEEEEeCCCCCCCccccc----------CCceeEEEeccc--cccCcceEEcc---------ccc----
Q 016136 241 VGGSTLDSHHGFVVEYGKDRDVDLGFHVD----------DSEVTLNVCLGK--QFTGGELFFRG---------TRC---- 295 (394)
Q Consensus 241 ~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D----------~SevTLNI~Ln~--dFeGGgl~F~~---------~~c---- 295 (394)
+ |..+-.|..-.+.+.|+ ...|.||.| +..+|+-|.|.+ .-++|++.+-. +.-
T Consensus 115 l-G~el~i~qs~~fe~kPG-~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~ 192 (344)
T 3nnf_A 115 T-GKNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLH 192 (344)
T ss_dssp H-TSCEEEEEEEEEEECBT-CCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHH
T ss_pred h-CCceeeeecceEeeCCC-CCCCCceecccccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHH
Confidence 2 33232333434677888 789999999 446899999953 23455555443 110
Q ss_pred -ccccc---CCCCcc------------------------ceeeecCCCceEEEecCCCCcCCccCCcc---ceeEEEeec
Q 016136 296 -EKHVN---TGSQTE------------------------EIFDYSHVPGRAVLHRGRHRHGARATTSG---HRVNLLLWC 344 (394)
Q Consensus 296 -~~hv~---~~~~~~------------------------e~~~~~~~~G~AlLHpGrh~HeglpVTsG---~RynLV~W~ 344 (394)
..... +...-+ ........||.||+|.+..+|++.|+..+ .|-++++-.
T Consensus 193 ~~~~Lk~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~Rf 272 (344)
T 3nnf_A 193 LKNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRL 272 (344)
T ss_dssp HHHHTTCCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEE
T ss_pred HHHHhhccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEE
Confidence 00000 000001 11233448999999999999999977663 466665543
Q ss_pred c
Q 016136 345 R 345 (394)
Q Consensus 345 r 345 (394)
-
T Consensus 273 v 273 (344)
T 3nnf_A 273 V 273 (344)
T ss_dssp E
T ss_pred e
Confidence 3
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=94.79 E-value=0.11 Score=48.70 Aligned_cols=160 Identities=16% Similarity=0.246 Sum_probs=88.9
Q ss_pred CcEEEee-cCCHHHHHHHHHHHHhhhhhhhcccc----cccccCCCCcccc--------ccccc-chHHHHHHHHHHHhh
Q 016136 166 PGVFTFE-MLQPRFCELLLAEVENFEKWVNEAKF----RIMRPNTMNKYGA--------VLDDF-GLETMLDKLMETYIR 231 (394)
Q Consensus 166 P~Vy~fp-vfspefC~~LIeE~E~f~~Ws~gs~~----~i~rPn~mN~ygv--------vLddi-Gl~~~~~~Ll~~yl~ 231 (394)
|+|+.+| +|+++..+.|++++.+--.|...... ...-|....-||- ..... ++-..+..|++. +
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~-~- 117 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNR-I- 117 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHHH-H-
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHHH-H-
Confidence 5788887 99999999999999754456432210 0001222222331 01111 333333333321 1
Q ss_pred hhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCC------ceeEEEeccccccCcceEEcccccccccc--CCC
Q 016136 232 PLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRGTRCEKHVN--TGS 303 (394)
Q Consensus 232 PL~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~~~c~~hv~--~~~ 303 (394)
. .++ +..+| ...|-.|.++. ..+++|.|+. ..-++|+| |+.+.|. .+|..... .+.
T Consensus 118 --~-~~~----g~~~n--~~LvN~Y~~G~-d~i~~H~D~~~~~~~~~~IaslSL-----G~~~~f~-f~~~~~~~~~~~~ 181 (238)
T 2iuw_A 118 --E-ENT----GHTFN--SLLCNLYRNEK-DSVDWHSDDEPSLGRCPIIASLSF-----GATRTFE-MRKKPPPEENGDY 181 (238)
T ss_dssp --H-HHH----SCCCC--EEEEEEECSTT-CCEEEECCCCGGGCSSCCEEEEEE-----ESCEEEE-EEECCC-------
T ss_pred --H-HHh----CCCCC--EEEEEEECCCC-CceeCCcCChhhcCCCCcEEEEEC-----CCCEEEE-EeccCCccccCcc
Confidence 1 111 23344 45577787763 4899999974 24456666 3444443 22221000 000
Q ss_pred CccceeeecCCCceEEEecCC----CCcCCccCC--ccceeEEEee
Q 016136 304 QTEEIFDYSHVPGRAVLHRGR----HRHGARATT--SGHRVNLLLW 343 (394)
Q Consensus 304 ~~~e~~~~~~~~G~AlLHpGr----h~HeglpVT--sG~RynLV~W 343 (394)
.....+.+....|..++..|. ..|+..++. .|.|.||..-
T Consensus 182 ~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR 227 (238)
T 2iuw_A 182 TYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFR 227 (238)
T ss_dssp -CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEE
T ss_pred cCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEee
Confidence 012456778999999999998 569988873 8899999753
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=94.56 E-value=0.084 Score=52.35 Aligned_cols=144 Identities=16% Similarity=0.327 Sum_probs=75.6
Q ss_pred ccccCCcEEEee-cCCHHHHHHHHHHHHhhhhhhhccc-c---cccccCCCCccccccc------c------cchHHHHH
Q 016136 161 ISEPSPGVFTFE-MLQPRFCELLLAEVENFEKWVNEAK-F---RIMRPNTMNKYGAVLD------D------FGLETMLD 223 (394)
Q Consensus 161 ~~ep~P~Vy~fp-vfspefC~~LIeE~E~f~~Ws~gs~-~---~i~rPn~mN~ygvvLd------d------iGl~~~~~ 223 (394)
+....|||+.+| ++++++.+.|++++. |..... + ..+.++....||..++ + .++-.++.
T Consensus 106 ~~~lp~Gl~~~p~fis~~Ee~~Ll~~i~----w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~ 181 (345)
T 3tht_A 106 PQALPPGLMVVEEIISSEEEKMLLESVD----WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICE 181 (345)
T ss_dssp CCSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHH
T ss_pred cccCCCceEEEcCcCCHHHHHHHHHhcc----cCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHH
Confidence 344567899997 999999999998775 432110 0 1122334445664321 1 12323344
Q ss_pred HHHHHHhhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCCc----eeEEEeccccccCcceEEccccccccc
Q 016136 224 KLMETYIRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDSE----VTLNVCLGKQFTGGELFFRGTRCEKHV 299 (394)
Q Consensus 224 ~Ll~~yl~PL~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se----vTLNI~Ln~dFeGGgl~F~~~~c~~hv 299 (394)
.+++.... . ++.+..+| ...|-.|.++. .+++|.|+.. .-+.|+|+ +...|. .++..
T Consensus 182 ~l~~r~~~----~---~~~~~~~n--~~lvN~Y~~G~--~I~~H~D~~~~~~~~I~slSLG-----~~~~f~-f~~~~-- 242 (345)
T 3tht_A 182 SFLEKWLR----K---GYIKHKPD--QMTINQYEPGQ--GIPAHIDTHSAFEDEIVSLSLG-----SEIVMD-FKHPD-- 242 (345)
T ss_dssp HHHHHHHH----H---TSCSSCCS--EEEEEEECTTC--CEEEECCCTTTBCSCEEEEEES-----SCEEEE-EECTT--
T ss_pred HHHHHHHh----c---ccCCCCCC--EEEEEEecCCC--CEeeccCCchhcCCeEEEEECC-----CceeEE-EccCC--
Confidence 44443221 0 12233333 45688899875 9999999852 33455554 333333 11110
Q ss_pred cCCCCccceeeecCCCceEEEecCC----CCcCCccCC
Q 016136 300 NTGSQTEEIFDYSHVPGRAVLHRGR----HRHGARATT 333 (394)
Q Consensus 300 ~~~~~~~e~~~~~~~~G~AlLHpGr----h~HeglpVT 333 (394)
.....+....|..++-.|. +.|+..++.
T Consensus 243 ------~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 243 ------GIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp ------SCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred ------CceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 1234567889999999986 447655443
No 16
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=94.42 E-value=0.3 Score=44.67 Aligned_cols=158 Identities=17% Similarity=0.219 Sum_probs=87.8
Q ss_pred cEEEeecCCHHHHHHHHHHHHhhhhhhhc--cccc-----ccccCCCCcccc----------cccccchHHHHHHHHHHH
Q 016136 167 GVFTFEMLQPRFCELLLAEVENFEKWVNE--AKFR-----IMRPNTMNKYGA----------VLDDFGLETMLDKLMETY 229 (394)
Q Consensus 167 ~Vy~fpvfspefC~~LIeE~E~f~~Ws~g--s~~~-----i~rPn~mN~ygv----------vLddiGl~~~~~~Ll~~y 229 (394)
.+|...+|+++.++.|++++.+--.|..+ ..+. +.-|....=||- .+...++..++..+++.
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~l~~~- 90 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDH- 90 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHHHHHH-
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHHHHHH-
Confidence 45555699999999999999875567321 1111 111222222331 12223344455554442
Q ss_pred hhhhhhhhcccccCCCCcccceeEEEEeCCCCCCCcccccCC-c-----eeEEEeccccccCcceEEcccccccccc-CC
Q 016136 230 IRPLSKVFFAEVGGSTLDSHHGFVVEYGKDRDVDLGFHVDDS-E-----VTLNVCLGKQFTGGELFFRGTRCEKHVN-TG 302 (394)
Q Consensus 230 l~PL~~~LfPe~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S-e-----vTLNI~Ln~dFeGGgl~F~~~~c~~hv~-~~ 302 (394)
+ .+ ++ +..+| ...|-.|.++. ..+++|.|+. + .-++|+| |+...|. .+|...-. ..
T Consensus 91 ~---~~-~~----g~~~n--~~LvN~Y~~G~-d~i~~H~D~~~~~~~~~~IasvSL-----G~~~~f~-~~~~~~~~~~~ 153 (204)
T 3s57_A 91 V---SG-VT----GQTFN--FVLINRYKDGS-DHICEHRDDERELAPGSPIASVSF-----GASRDFV-FRHKDSRGKSP 153 (204)
T ss_dssp H---HH-HH----CCCCS--EEEEEEESSTT-CCEEEECCCCTTBCTTCCEEEEEE-----ESCEEEE-EEEGGGCSSSC
T ss_pred H---HH-Hh----CCCCc--eeEEEEECCCC-CcccceecChhhccCCCcEEEEEC-----CCceEEE-EEEcCCCcccc
Confidence 1 11 11 23344 45678898864 3799999983 2 4455666 3344443 22221000 00
Q ss_pred CCccceeeecCCCceEEEecCC----CCcCCccCC--ccceeEEEe
Q 016136 303 SQTEEIFDYSHVPGRAVLHRGR----HRHGARATT--SGHRVNLLL 342 (394)
Q Consensus 303 ~~~~e~~~~~~~~G~AlLHpGr----h~HeglpVT--sG~RynLV~ 342 (394)
........+....|..++-.|. +.|+..++. .|.|.||..
T Consensus 154 ~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 154 SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEE
T ss_pred ccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEe
Confidence 1112456678899999999998 568776665 388999874
No 17
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=90.26 E-value=0.78 Score=42.38 Aligned_cols=80 Identities=23% Similarity=0.316 Sum_probs=53.4
Q ss_pred ceeEEEEeCCCCCCCcccccCCc-----eeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC
Q 016136 250 HGFVVEYGKDRDVDLGFHVDDSE-----VTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR 324 (394)
Q Consensus 250 ~~FVVrY~~~~d~~L~~H~D~Se-----vTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr 324 (394)
...|-.|.++. .+++|.|..+ .-++|+| |+...|. .+|.. ..+....+....|..++-.|.
T Consensus 106 ~~LvN~Y~~G~--~i~~H~D~~e~~~~~pI~svSL-----G~~~~f~-f~~~~------~~~~~~~i~L~~GsllvM~G~ 171 (211)
T 3i3q_A 106 ACLINRYAPGA--KLSLHQDKDEPDLRAPIVSVSL-----GLPAIFQ-FGGLK------RNDPLKRLLLEHGDVVVWGGE 171 (211)
T ss_dssp EEEEEEECTTC--CEEEECCCCCSCTTSCEEEEEE-----ESCEEEE-ECCSS------TTSCCEEEEECTTCEEEECGG
T ss_pred EEEEEEEcCCC--CcccccCCCccccCCCEEEEEC-----CCCeEEE-Eeccc------CCCceEEEECCCCCEEEECch
Confidence 45677898886 9999999422 2345555 3444444 22211 112345678899999999887
Q ss_pred ---CCcCCccCCc-------cceeEEEee
Q 016136 325 ---HRHGARATTS-------GHRVNLLLW 343 (394)
Q Consensus 325 ---h~HeglpVTs-------G~RynLV~W 343 (394)
+.|+..++.. |.|.||..-
T Consensus 172 ~r~~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 172 SRLFYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp GTTCCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred HHceEeccCcccCCcCCCCCCCEEEEEee
Confidence 7899888886 469998753
No 18
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=87.87 E-value=0.41 Score=45.65 Aligned_cols=76 Identities=22% Similarity=0.251 Sum_probs=57.9
Q ss_pred CCcccccCCceeEEEecc-ccccCcceEEccccccccccCCCCccceeeec-CCCceEEEecCC-CCcCCccCCc-----
Q 016136 263 DLGFHVDDSEVTLNVCLG-KQFTGGELFFRGTRCEKHVNTGSQTEEIFDYS-HVPGRAVLHRGR-HRHGARATTS----- 334 (394)
Q Consensus 263 ~L~~H~D~SevTLNI~Ln-~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~-~~~G~AlLHpGr-h~HeglpVTs----- 334 (394)
-=+.|.|..++++.+.++ ..-+||++........ ...... ..+|.+++.--+ .+|++.||.+
T Consensus 162 PEGiHrDG~d~v~v~lv~R~Ni~GGet~I~~~~~~----------~~~~~~l~~p~d~llv~D~~~~H~vTpI~~~~~~~ 231 (254)
T 3pl0_A 162 PEGAHRDGVDFVAVVFIGRQGVRGGETRVFDAAGP----------QGVRFTLEQPWTVLLLDDQQVIHESTPLLPLDPAD 231 (254)
T ss_dssp TTCSBCCSSSEEEEEEEEEESEEECCEEEEETTSS----------EEEEECCCSTTCEEEEETTTEEEEECCEEESCTTC
T ss_pred CcccccCCCCEEEEEEecCCccccceEEEEcCCCC----------ccceeEecCCCcEEEEeCCcccCCCCccccCCCCC
Confidence 457999999999999997 4688999998764321 222223 388888888755 8999999874
Q ss_pred ----cceeEEEeecchhH
Q 016136 335 ----GHRVNLLLWCRSSV 348 (394)
Q Consensus 335 ----G~RynLV~W~rss~ 348 (394)
|.|-+||+-++.-.
T Consensus 232 ~~~~g~RDvlVvtf~~~~ 249 (254)
T 3pl0_A 232 PAVPAHRDTLVLTYRSGG 249 (254)
T ss_dssp TTSCCEEEEEEEEEESSS
T ss_pred CCCceEEEEEEEEecCCc
Confidence 88999999887643
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=82.88 E-value=2.4 Score=41.54 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=60.0
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016136 253 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 324 (394)
Q Consensus 253 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr---- 324 (394)
+.+|-+- ....+++|+|-+.+||... ++ -|||.... . .+++.+.+.+|..||.-|.
T Consensus 214 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~-~-----------g~Wi~V~p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 214 INYYPKCPQPELALGVEAHTDVSALTFILH--NM--VPGLQLFY-E-----------GKWVTAKCVPDSIVMHIGDTLEI 277 (356)
T ss_dssp EEEECCCSSTTTCCSEEEECCCSSEEEEEE--CS--CCCEEEEE-T-----------TEEEECCCCTTCEEEEECHHHHH
T ss_pred eeecCCCCCcccccCcCCccCCCeEEEEEE--cC--CCCeEEec-C-----------CcEEECcCCCCeEEEEeccHHHH
Confidence 5778653 2446889999999999875 22 36677652 1 3678899999999999885
Q ss_pred --------CCcCCccCCccceeEEEeecchh
Q 016136 325 --------HRHGARATTSGHRVNLLLWCRSS 347 (394)
Q Consensus 325 --------h~HeglpVTsG~RynLV~W~rss 347 (394)
..|.+..-....||.+..|+.-+
T Consensus 278 ~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 278 LSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp HTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred hcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 57888765667899999999875
No 20
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=82.52 E-value=2.6 Score=40.74 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=59.8
Q ss_pred EEEEeCCC----CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016136 253 VVEYGKDR----DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 324 (394)
Q Consensus 253 VVrY~~~~----d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr---- 324 (394)
+.+|-+-. ...+++|+|-+.+||... ++ +-|||.... ..+++.+.|.+|..||.-|.
T Consensus 159 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~-~v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 159 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQ--DD-KVSGLQLLK------------DGQWIDVPPMRHSIVVNLGDQLEV 223 (319)
T ss_dssp EEECCCCSCGGGGSSCCCBCCSSSEEEEEE--SS-SCCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEe--cC-CCCeeeEee------------CCeEEEcccCCCcEEEEhHHHHHH
Confidence 56776532 346899999999999864 21 236677642 13678899999999999886
Q ss_pred --------CCcCCccCCccceeEEEeecchh
Q 016136 325 --------HRHGARATTSGHRVNLLLWCRSS 347 (394)
Q Consensus 325 --------h~HeglpVTsG~RynLV~W~rss 347 (394)
..|.+..-..+.||.+..|+.-+
T Consensus 224 ~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 224 ITNGKYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp HTTTSSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred HhCCeeecccceecCCCCCCceEEEEEecCC
Confidence 57888776677899999999854
No 21
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=80.50 E-value=2.5 Score=39.99 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=57.8
Q ss_pred EEEEeCCC------CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC--
Q 016136 253 VVEYGKDR------DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR-- 324 (394)
Q Consensus 253 VVrY~~~~------d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr-- 324 (394)
+.+|-+-. ...+++|+|-+.+||... + +-|||..... ..+.+.+.|.+|..||.-|.
T Consensus 154 ~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q--d--~~~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l 218 (280)
T 3on7_A 154 ILHYPPMTGDEEMGAIRAAAHEDINLITVLPT--A--NEPGLQVKAK-----------DGSWLDVPSDFGNIIINIGDML 218 (280)
T ss_dssp EEEECCCCTTCCCCSEEEEEECCCSSEEEEEC--C--SCCCEEEECT-----------TSCEEECCCCTTCEEEEECHHH
T ss_pred EEECCCCCCccccCcccccCCCCCCeEEEEEe--c--CCCCeEEEcC-----------CCCEEECcCCCCEEEEEcChHH
Confidence 57787532 234789999999999864 2 2367776531 13678899999999999986
Q ss_pred ----------CCcCCccCC----ccceeEEEeecchh
Q 016136 325 ----------HRHGARATT----SGHRVNLLLWCRSS 347 (394)
Q Consensus 325 ----------h~HeglpVT----sG~RynLV~W~rss 347 (394)
..|.+..-. ...||.+..|+.-+
T Consensus 219 ~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 219 QEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp HHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred HHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 468765432 45799999999865
No 22
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=79.78 E-value=2.7 Score=40.40 Aligned_cols=81 Identities=20% Similarity=0.162 Sum_probs=56.8
Q ss_pred EEEEeCCC--------CCCCcccccCCceeEEEeccccccCcc--eEEccccccccccCCCCccceeeecCCCceEEEec
Q 016136 253 VVEYGKDR--------DVDLGFHVDDSEVTLNVCLGKQFTGGE--LFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHR 322 (394)
Q Consensus 253 VVrY~~~~--------d~~L~~H~D~SevTLNI~Ln~dFeGGg--l~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHp 322 (394)
+.+|-+-. +..+++|+|-+.+||...=+ + .||+ |.... . .+.+.+.+.+|..||.-
T Consensus 161 l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~-~-v~G~~~LqV~~-~-----------g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 161 FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTP-C-ANGFVSLQAEV-G-----------GAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp EEEECC-----------CCEEEEEECSSEEEEEEEC-C-TTCCCCEEEEE-T-----------TEEEECCCCTTCEEEEE
T ss_pred eecCCCCCcccccCccccccccccCCCeEEEEecCC-C-CCCceeEEEEe-C-----------CEEEeCcCCCCeEEEEH
Confidence 57786522 33489999999999987621 2 2332 76653 1 35778899999999998
Q ss_pred CC------------CCcCCccCC-----ccceeEEEeecchh
Q 016136 323 GR------------HRHGARATT-----SGHRVNLLLWCRSS 347 (394)
Q Consensus 323 Gr------------h~HeglpVT-----sG~RynLV~W~rss 347 (394)
|. ..|.+..-. ...||.+..|+.-+
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 85 578887654 45799999999865
No 23
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=77.06 E-value=3.4 Score=39.50 Aligned_cols=80 Identities=19% Similarity=0.199 Sum_probs=56.7
Q ss_pred EEEEeCC----CCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC----
Q 016136 253 VVEYGKD----RDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR---- 324 (394)
Q Consensus 253 VVrY~~~----~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr---- 324 (394)
+.+|-+- .+..+++|+|-+.+||... ++ -|||..... ..+.+.+.+.+|..||.-|.
T Consensus 173 ~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 173 LLHYPPIPKDATGVRAGAHGDINTITLLLG--AE--EGGLEVLDR-----------DGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp EEEECCCSSCCC--CEEEECCCSSEEEEEC--CT--TSCEEEECT-----------TSCEEECCCCSSCEEEEECHHHHH
T ss_pred eEecCCCCCCcCCcCccceecCceEEEEeE--cC--cCceEEECC-----------CCcEEECCCCCCeEEEEhHHHHHH
Confidence 5678762 2356789999999999864 32 366776431 13578889999999999886
Q ss_pred --------CCcCCccCC----ccceeEEEeecchh
Q 016136 325 --------HRHGARATT----SGHRVNLLLWCRSS 347 (394)
Q Consensus 325 --------h~HeglpVT----sG~RynLV~W~rss 347 (394)
..|.+.... ...||.+..|+.-+
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~ 272 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFA 272 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCC
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCC
Confidence 468875432 34599999999865
No 24
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=75.94 E-value=3.3 Score=40.01 Aligned_cols=70 Identities=14% Similarity=0.131 Sum_probs=53.1
Q ss_pred CCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCC------------CCcC
Q 016136 261 DVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGR------------HRHG 328 (394)
Q Consensus 261 d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGr------------h~He 328 (394)
...+++|+|-+.+||... ++ -|||..... .. ++.+.+.+|..||.-|. ..|.
T Consensus 208 ~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~~-----------~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HR 271 (331)
T 1odm_A 208 KLSFEWHEDVSLITVLYQ--SN--VQNLQVETA-----------AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHR 271 (331)
T ss_dssp EEEEEEECCSSSEEEEEE--CS--SCCEEEEET-----------TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEE
T ss_pred ccccccccCCCeEEEEee--CC--CCCEEEEcC-----------CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCce
Confidence 345889999999999876 22 467776521 14 67889999999999886 5688
Q ss_pred CccCCccceeEEEeecchh
Q 016136 329 ARATTSGHRVNLLLWCRSS 347 (394)
Q Consensus 329 glpVTsG~RynLV~W~rss 347 (394)
+.. ....||.+..|+.-+
T Consensus 272 Vv~-~~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 272 VKW-VNAERQSLPFFVNLG 289 (331)
T ss_dssp EEC-CCSCEEEEEEEECCC
T ss_pred eCC-CCCCEEEEEEEEcCC
Confidence 863 356799999999865
No 25
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=71.36 E-value=5 Score=36.78 Aligned_cols=78 Identities=12% Similarity=0.065 Sum_probs=53.4
Q ss_pred eeEEEEeCCCCCCCcccccCCceeEEEeccccccCcceEEccccccccccCCCCccceeeecCCCceEEEecCCCCcCCc
Q 016136 251 GFVVEYGKDRDVDLGFHVDDSEVTLNVCLGKQFTGGELFFRGTRCEKHVNTGSQTEEIFDYSHVPGRAVLHRGRHRHGAR 330 (394)
Q Consensus 251 ~FVVrY~~~~d~~L~~H~D~SevTLNI~Ln~dFeGGgl~F~~~~c~~hv~~~~~~~e~~~~~~~~G~AlLHpGrh~Hegl 330 (394)
+++.+-.|+. .+.+|+|-+-..+.+-|+=.--.++|+|.=.+ -.+.-+.|.+++|-....|++-
T Consensus 104 a~fs~L~pG~--~I~pH~g~~n~~lR~HL~L~~p~~~~~i~V~~--------------~~~~w~eGe~~~fDds~~Hev~ 167 (197)
T 3rcq_A 104 IKYSIMHPGT--HVWPHTGPTNCRLRMHLGLVIPKEGCKIRCAN--------------ETKTWEEGKVLIFDDSFEHEVW 167 (197)
T ss_dssp EEEEEECTTE--EEEEECCSCTTEEEEEEEEECCSSSEEEEETT--------------EEECCCBTCEEEECTTSCEEEE
T ss_pred EEEEEeCCCC--CcCCeeCCCCCeEEEEEEEEeCCCCcEEEECC--------------EEEEeeCCcEEEEcCCeEEEEE
Confidence 4456666665 99999997655444444311100345554111 1246789999999999999999
Q ss_pred cCCccceeEEEeec
Q 016136 331 ATTSGHRVNLLLWC 344 (394)
Q Consensus 331 pVTsG~RynLV~W~ 344 (394)
--+.+.|++|++=+
T Consensus 168 N~~d~~RvvL~~D~ 181 (197)
T 3rcq_A 168 QDASSFRLIFIVDV 181 (197)
T ss_dssp ECSSSCEEEEEEEE
T ss_pred ECCCCCEEEEEEee
Confidence 99999999998743
No 26
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=69.74 E-value=1.6 Score=35.41 Aligned_cols=50 Identities=22% Similarity=0.362 Sum_probs=29.8
Q ss_pred CCCCcCCccCCccceeEEEeecch-hHHHHHHhhhc-----cccccccccchhHHH
Q 016136 323 GRHRHGARATTSGHRVNLLLWCRS-SVFREMKRYQK-----DFSSWCGECFREKKE 372 (394)
Q Consensus 323 Grh~HeglpVTsG~RynLV~W~rs-s~~R~~~~y~~-----~f~~~c~~c~~~~~~ 372 (394)
|-|.|++.++-.-.+..||.=+-+ ..|.+.-+-.+ =++.||+-|......
T Consensus 3 ~~~~~~~~~~~~~~~~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~ 58 (125)
T 1r26_A 3 GWHHHHHHGIRMRARYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERP 58 (125)
T ss_dssp ---------CCCSSCCSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHH
T ss_pred ccccccccceeeeccccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHH
Confidence 347889999998999988888888 77776542222 357899999766554
No 27
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=44.07 E-value=6.6 Score=28.02 Aligned_cols=13 Identities=23% Similarity=0.634 Sum_probs=9.5
Q ss_pred ccccccccchhHH
Q 016136 359 FSSWCGECFREKK 371 (394)
Q Consensus 359 f~~~c~~c~~~~~ 371 (394)
|+.|||-|.....
T Consensus 7 ~a~wC~~C~~~~~ 19 (77)
T 1ilo_A 7 YGTGCANCQMLEK 19 (77)
T ss_dssp ECSSSSTTHHHHH
T ss_pred EcCCChhHHHHHH
Confidence 5689999965443
No 28
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=39.09 E-value=73 Score=29.64 Aligned_cols=32 Identities=13% Similarity=0.260 Sum_probs=26.3
Q ss_pred CCCCcccccCC------ceeEEEeccccccCcceEEcc
Q 016136 261 DVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRG 292 (394)
Q Consensus 261 d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~ 292 (394)
...+.+|.|.| .+++.-|+.-.=+||+|.|..
T Consensus 102 ~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcCCCCceEEEEEeecCCCCCcccccc
Confidence 45789999998 689999996555899999975
No 29
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=38.23 E-value=10 Score=27.29 Aligned_cols=12 Identities=25% Similarity=0.318 Sum_probs=9.4
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|...+.
T Consensus 10 ~~~C~~C~~~~~ 21 (85)
T 1nho_A 10 SPTCPYCPMAIE 21 (85)
T ss_dssp CSSSCCSTTHHH
T ss_pred CCCCcchHHHHH
Confidence 589999976654
No 30
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=37.83 E-value=87 Score=24.17 Aligned_cols=34 Identities=9% Similarity=0.130 Sum_probs=27.4
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeEEEeecc
Q 016136 311 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCR 345 (394)
Q Consensus 311 ~~~~~G~AlLHpGrh~HeglpVTsG~RynLV~W~r 345 (394)
+...+|.+++.+....|..... .+.++.+|++-.
T Consensus 78 ~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~~ 111 (114)
T 2ozj_A 78 IDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLID 111 (114)
T ss_dssp EEECTTCEEEECTTCCBEEEEE-EEEEEEEEEECC
T ss_pred EEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEcc
Confidence 4578999999999999998875 567888777643
No 31
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=35.31 E-value=12 Score=26.94 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=9.3
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|...+.
T Consensus 11 ~~~C~~C~~~~~ 22 (85)
T 1fo5_A 11 SPMCPHCPAAKR 22 (85)
T ss_dssp CCCSSCCCTHHH
T ss_pred CCCCCchHHHHH
Confidence 479999976654
No 32
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=32.18 E-value=16 Score=28.19 Aligned_cols=13 Identities=23% Similarity=0.585 Sum_probs=9.4
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 26 a~wC~~C~~~~~~ 38 (112)
T 2voc_A 26 APWCGPSKMIAPV 38 (112)
T ss_dssp CTTBGGGGGHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3799999765543
No 33
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=32.03 E-value=1.1e+02 Score=23.92 Aligned_cols=41 Identities=7% Similarity=0.092 Sum_probs=27.6
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeEEEeecchhHHHH
Q 016136 311 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFRE 351 (394)
Q Consensus 311 ~~~~~G~AlLHpGrh~HeglpVTsG~RynLV~W~rss~~R~ 351 (394)
+...+|.+++.+....|.........--.+++|+..+.+..
T Consensus 74 ~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~~~~~~~ 114 (128)
T 4i4a_A 74 FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWDKESTLN 114 (128)
T ss_dssp EEEETTCEEEECTTCCEEEEECSSSCEEEEEEEECHHHHHH
T ss_pred EEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEECHHHHHH
Confidence 45789999999999999987765443233445555554443
No 34
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=31.56 E-value=11 Score=28.03 Aligned_cols=11 Identities=27% Similarity=0.555 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 3die_A 29 TACGPCKMIAP 39 (106)
T ss_dssp SBCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 79999965543
No 35
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=31.45 E-value=11 Score=27.98 Aligned_cols=12 Identities=33% Similarity=1.054 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||.|.....
T Consensus 28 ~~~C~~C~~~~~ 39 (104)
T 2vim_A 28 AQWCGPCRNIAP 39 (104)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHhhH
Confidence 379999966544
No 36
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=30.51 E-value=15 Score=27.82 Aligned_cols=13 Identities=38% Similarity=1.066 Sum_probs=9.6
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+.|......
T Consensus 33 ~~~C~~C~~~~~~ 45 (120)
T 1mek_A 33 APWCGHCKALAPE 45 (120)
T ss_dssp CSSCSTTSTTHHH
T ss_pred CCCCHHHHHhhHH
Confidence 3799999776543
No 37
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=29.51 E-value=1.8e+02 Score=26.53 Aligned_cols=42 Identities=17% Similarity=0.219 Sum_probs=30.2
Q ss_pred eeEEEEeCCC-CCCCcccccCC------ceeEEEeccccccCcceEEcc
Q 016136 251 GFVVEYGKDR-DVDLGFHVDDS------EVTLNVCLGKQFTGGELFFRG 292 (394)
Q Consensus 251 ~FVVrY~~~~-d~~L~~H~D~S------evTLNI~Ln~dFeGGgl~F~~ 292 (394)
.++|.-.++. .....+|.|.| .+++.-|+.-.=+||+|.|..
T Consensus 82 i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 82 IIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp EEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEE
T ss_pred EEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCCCCCcceeee
Confidence 4556555421 22457999998 589999997666899999975
No 38
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=29.36 E-value=13 Score=29.57 Aligned_cols=13 Identities=31% Similarity=0.851 Sum_probs=9.6
Q ss_pred ccccccccchhHH
Q 016136 359 FSSWCGECFREKK 371 (394)
Q Consensus 359 f~~~c~~c~~~~~ 371 (394)
++.|||-|.+.+.
T Consensus 20 ~A~WC~~C~~~~p 32 (106)
T 3kp8_A 20 GAYWCPHCQDQKE 32 (106)
T ss_dssp ECTTCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 4689999966543
No 39
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=29.11 E-value=13 Score=27.67 Aligned_cols=12 Identities=33% Similarity=0.905 Sum_probs=8.7
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+.|......
T Consensus 28 ~~C~~C~~~~~~ 39 (105)
T 1fb6_A 28 PWCGPCKLIAPV 39 (105)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCChHHHHHHHH
Confidence 799999665443
No 40
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=28.92 E-value=13 Score=27.75 Aligned_cols=12 Identities=25% Similarity=0.946 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 30 ~~~C~~C~~~~~ 41 (109)
T 3tco_A 30 AEWCAPCHLYEP 41 (109)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHhhhH
Confidence 479999965543
No 41
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=28.88 E-value=25 Score=32.15 Aligned_cols=31 Identities=16% Similarity=0.111 Sum_probs=26.6
Q ss_pred CCCcccccCC------ceeEEEeccccc--cCcceEEcc
Q 016136 262 VDLGFHVDDS------EVTLNVCLGKQF--TGGELFFRG 292 (394)
Q Consensus 262 ~~L~~H~D~S------evTLNI~Ln~dF--eGGgl~F~~ 292 (394)
..+.+|.|.| .+++.-|+...= +||++.|..
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d 134 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCD 134 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEE
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhh
Confidence 4788999998 799999997655 899999985
No 42
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=28.85 E-value=15 Score=28.36 Aligned_cols=11 Identities=36% Similarity=1.117 Sum_probs=8.4
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 35 ~wC~~C~~~~p 45 (121)
T 2djj_A 35 PWCGHCKALAP 45 (121)
T ss_dssp SSCTTHHHHHH
T ss_pred CCCHhHHHhhH
Confidence 79999966544
No 43
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=28.61 E-value=15 Score=28.04 Aligned_cols=12 Identities=33% Similarity=0.739 Sum_probs=7.0
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 30 a~wC~~C~~~~~ 41 (112)
T 3d6i_A 30 TSWAEPCKALKQ 41 (112)
T ss_dssp CCC--CHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 489999966544
No 44
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=28.52 E-value=13 Score=28.32 Aligned_cols=13 Identities=23% Similarity=0.715 Sum_probs=9.3
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.|||.|......
T Consensus 33 a~wC~~C~~~~~~ 45 (111)
T 2pu9_C 33 TQWCGPSKAMAPK 45 (111)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHCHH
Confidence 4799999665543
No 45
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=28.12 E-value=49 Score=34.11 Aligned_cols=46 Identities=9% Similarity=0.039 Sum_probs=36.9
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeEEEeecchhHHHHHHhhhccccccccccchhHHH
Q 016136 311 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFREKKE 372 (394)
Q Consensus 311 ~~~~~G~AlLHpGrh~HeglpVTsG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~~ 372 (394)
....||..|+..+...|++.++.+|...-.|+.+ .-||.|..+..-
T Consensus 369 P~vePGD~V~WH~D~iH~V~~~h~g~~~s~V~YI----------------pa~P~~~~N~~y 414 (461)
T 2dbn_A 369 PKLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYI----------------PAAPMCEKNLAY 414 (461)
T ss_dssp CCBCTTCEEEEETTCCEEECCBSSCCSCCCEEEC----------------CBCEESHHHHHH
T ss_pred CCCCCCCEEEEcCCCccccccCCCCCcceeEEEe----------------cCCCCcccCHHH
Confidence 3468999999999999999999999887776543 348999766554
No 46
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=28.10 E-value=14 Score=27.80 Aligned_cols=11 Identities=36% Similarity=1.180 Sum_probs=8.1
Q ss_pred cccccccchhH
Q 016136 360 SSWCGECFREK 370 (394)
Q Consensus 360 ~~~c~~c~~~~ 370 (394)
+.||+.|....
T Consensus 30 ~~~C~~C~~~~ 40 (111)
T 3uvt_A 30 APWCGHCKTLA 40 (111)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCChhHHHhh
Confidence 37999996543
No 47
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=27.91 E-value=23 Score=28.72 Aligned_cols=22 Identities=27% Similarity=0.502 Sum_probs=15.0
Q ss_pred ccceeEEEeecchhHHHHHHhhhccccccccccchh
Q 016136 334 SGHRVNLLLWCRSSVFREMKRYQKDFSSWCGECFRE 369 (394)
Q Consensus 334 sG~RynLV~W~rss~~R~~~~y~~~f~~~c~~c~~~ 369 (394)
.|.++++|.|.++ .||+-|..+
T Consensus 34 ~gk~~vvl~F~~a--------------~~C~~C~~~ 55 (160)
T 1xvw_A 34 RGAKNVLLVFFPL--------------AFTGICQGE 55 (160)
T ss_dssp TTTCEEEEEECSC--------------TTSSHHHHH
T ss_pred cCCCCEEEEEECC--------------CCCCchHHH
Confidence 5766777766543 799999543
No 48
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=27.90 E-value=14 Score=28.82 Aligned_cols=13 Identities=31% Similarity=1.007 Sum_probs=9.3
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.|||-|......
T Consensus 46 a~wC~~C~~~~~~ 58 (124)
T 1faa_A 46 TQWCGPCKAMAPK 58 (124)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHhHH
Confidence 3799999765543
No 49
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=27.79 E-value=20 Score=28.10 Aligned_cols=12 Identities=50% Similarity=1.304 Sum_probs=9.2
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 45 ~wC~~C~~~~~~ 56 (130)
T 2dml_A 45 PWCGHCQRLTPE 56 (130)
T ss_dssp TTCSTTGGGHHH
T ss_pred CCCHHHHhhCHH
Confidence 799999766543
No 50
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=27.63 E-value=14 Score=27.52 Aligned_cols=12 Identities=42% Similarity=1.132 Sum_probs=8.7
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||.|.....
T Consensus 29 ~~~C~~C~~~~~ 40 (105)
T 3m9j_A 29 ATWCGPCKMIKP 40 (105)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 379999965544
No 51
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=27.41 E-value=15 Score=27.06 Aligned_cols=12 Identities=25% Similarity=0.952 Sum_probs=8.7
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 25 ~~~C~~C~~~~~ 36 (104)
T 2e0q_A 25 AEWCAPCLILAP 36 (104)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChhHHHHhH
Confidence 379999966544
No 52
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=26.97 E-value=15 Score=27.49 Aligned_cols=11 Identities=36% Similarity=1.105 Sum_probs=8.3
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 27 ~~C~~C~~~~~ 37 (105)
T 1nsw_A 27 AWCGPCRMMAP 37 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965544
No 53
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=26.89 E-value=16 Score=28.62 Aligned_cols=12 Identities=50% Similarity=1.337 Sum_probs=8.9
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 36 a~wC~~C~~~~~ 47 (130)
T 2kuc_A 36 TTWCGPCKRLSK 47 (130)
T ss_dssp CTTCTHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 479999976544
No 54
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=26.48 E-value=15 Score=27.57 Aligned_cols=12 Identities=33% Similarity=0.891 Sum_probs=8.7
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+.|......
T Consensus 30 ~~C~~C~~~~~~ 41 (108)
T 2trx_A 30 EWCGPCKMIAPI 41 (108)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHhHHHHHHH
Confidence 799999665443
No 55
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=26.47 E-value=15 Score=27.76 Aligned_cols=13 Identities=31% Similarity=0.882 Sum_probs=9.2
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+.|......
T Consensus 33 ~~~C~~C~~~~~~ 45 (112)
T 1ep7_A 33 ATWCGPCKMIAPL 45 (112)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4799999665443
No 56
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=26.18 E-value=18 Score=27.38 Aligned_cols=11 Identities=45% Similarity=1.156 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 35 ~~C~~C~~~~~ 45 (115)
T 1thx_A 35 SWCGPCQLMSP 45 (115)
T ss_dssp TTCTTHHHHHH
T ss_pred CCCHHHHHhHH
Confidence 79999965543
No 57
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=26.14 E-value=16 Score=28.22 Aligned_cols=11 Identities=36% Similarity=1.093 Sum_probs=8.4
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 34 ~wC~~C~~~~p 44 (109)
T 3f3q_A 34 TWCGPCKMIAP 44 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHhHHHHHH
Confidence 79999965543
No 58
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=25.99 E-value=16 Score=27.43 Aligned_cols=12 Identities=33% Similarity=0.985 Sum_probs=8.7
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||.|.....
T Consensus 28 ~~~C~~C~~~~~ 39 (107)
T 1dby_A 28 APWCGPCRIIAP 39 (107)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 379999965544
No 59
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=25.90 E-value=23 Score=28.27 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=8.5
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 40 ~~C~~C~~~~~ 50 (152)
T 2lja_A 40 TWCGPCRGELP 50 (152)
T ss_dssp SSCCGGGGTHH
T ss_pred CcCHhHHHHhH
Confidence 79999976544
No 60
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=25.88 E-value=16 Score=28.24 Aligned_cols=12 Identities=33% Similarity=1.074 Sum_probs=9.0
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 42 a~wC~~C~~~~~ 53 (117)
T 2xc2_A 42 ATWCGPCKTIAP 53 (117)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 479999966544
No 61
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=25.87 E-value=16 Score=27.75 Aligned_cols=11 Identities=36% Similarity=1.180 Sum_probs=8.3
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 33 ~~C~~C~~~~~ 43 (112)
T 1t00_A 33 AWCGPCRQIAP 43 (112)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHhcCH
Confidence 79999965543
No 62
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=25.71 E-value=16 Score=27.13 Aligned_cols=11 Identities=27% Similarity=0.872 Sum_probs=8.3
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 28 ~~C~~C~~~~~ 38 (109)
T 2yzu_A 28 EWCAPCRMIAP 38 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999965544
No 63
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=25.45 E-value=17 Score=27.11 Aligned_cols=12 Identities=33% Similarity=1.046 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|..-..
T Consensus 29 ~~~C~~C~~~~~ 40 (106)
T 1xwb_A 29 ATWCGPCKMISP 40 (106)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHHHHHhhH
Confidence 479999965544
No 64
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=25.39 E-value=17 Score=28.09 Aligned_cols=11 Identities=36% Similarity=1.057 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 35 ~~C~~C~~~~~ 45 (136)
T 1zzo_A 35 PWCPTCQGEAP 45 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999965543
No 65
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=25.31 E-value=17 Score=27.56 Aligned_cols=12 Identities=33% Similarity=0.736 Sum_probs=8.9
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 30 a~wC~~C~~~~~ 41 (107)
T 1gh2_A 30 MRGCGPCLRIAP 41 (107)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 489999966544
No 66
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=25.27 E-value=17 Score=28.26 Aligned_cols=12 Identities=17% Similarity=0.257 Sum_probs=8.9
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|.+...
T Consensus 38 a~wC~~C~~~~p 49 (118)
T 1zma_A 38 RKTCPYCRKFAG 49 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 489999976543
No 67
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=25.16 E-value=19 Score=27.79 Aligned_cols=11 Identities=27% Similarity=0.649 Sum_probs=8.5
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.|||-|...+.
T Consensus 29 ~wC~~C~~~~~ 39 (110)
T 2l6c_A 29 NLCPHCKNMEK 39 (110)
T ss_dssp SSCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999976544
No 68
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=24.96 E-value=22 Score=27.98 Aligned_cols=11 Identities=45% Similarity=0.954 Sum_probs=8.7
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 41 ~~C~~C~~~~~ 51 (148)
T 3hcz_A 41 SQCGHCQQETP 51 (148)
T ss_dssp GGGCTTCSHHH
T ss_pred CCCccHHHHHH
Confidence 79999976654
No 69
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=24.73 E-value=17 Score=27.88 Aligned_cols=13 Identities=38% Similarity=0.984 Sum_probs=9.2
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 35 a~~C~~C~~~~~~ 47 (112)
T 1syr_A 35 AEWCGPCKRIAPF 47 (112)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3799999665443
No 70
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=24.30 E-value=24 Score=26.72 Aligned_cols=10 Identities=30% Similarity=0.458 Sum_probs=7.9
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.|||-|....
T Consensus 28 ~wC~~C~~~~ 37 (105)
T 4euy_A 28 ENCGVCDVML 37 (105)
T ss_dssp SSCHHHHHHH
T ss_pred CCCcchHHHH
Confidence 7999996644
No 71
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=24.29 E-value=22 Score=27.65 Aligned_cols=13 Identities=38% Similarity=0.887 Sum_probs=9.7
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+.|......
T Consensus 45 ~~~C~~C~~~~~~ 57 (130)
T 1wmj_A 45 ASWCGPCRFIAPV 57 (130)
T ss_dssp SSSCSCSSSSHHH
T ss_pred CCCChhHHHHHHH
Confidence 4799999876543
No 72
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.27 E-value=18 Score=28.34 Aligned_cols=12 Identities=33% Similarity=0.983 Sum_probs=8.9
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 32 ~wC~~C~~~~p~ 43 (126)
T 1x5e_A 32 PWCPACQNLQPE 43 (126)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCHHHHHHhHH
Confidence 799999665543
No 73
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=30.07 E-value=16 Score=26.91 Aligned_cols=11 Identities=36% Similarity=1.063 Sum_probs=8.4
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 2yj7_A 29 PWCGPCRMIAP 39 (106)
Confidence 79999976544
No 74
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=24.23 E-value=17 Score=26.73 Aligned_cols=12 Identities=17% Similarity=0.528 Sum_probs=9.1
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|.+-+.
T Consensus 9 ~~~C~~C~~~~~ 20 (80)
T 2k8s_A 9 HAGCPVCVSAEQ 20 (80)
T ss_dssp ECSCHHHHHHHH
T ss_pred CCCCCchHHHHH
Confidence 479999966554
No 75
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=24.14 E-value=23 Score=27.88 Aligned_cols=10 Identities=30% Similarity=0.750 Sum_probs=7.7
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.||+-|....
T Consensus 43 ~~C~~C~~~~ 52 (148)
T 3fkf_A 43 SWCDPQPEAN 52 (148)
T ss_dssp GGGCCCHHHH
T ss_pred CCCHHHHHHh
Confidence 7999996544
No 76
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=24.14 E-value=18 Score=27.99 Aligned_cols=12 Identities=33% Similarity=1.043 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 30 a~~C~~C~~~~~ 41 (122)
T 3aps_A 30 APWCGPCQNFAP 41 (122)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999966544
No 77
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=24.10 E-value=18 Score=28.04 Aligned_cols=11 Identities=36% Similarity=0.939 Sum_probs=8.1
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 34 ~~C~~C~~~~~ 44 (136)
T 1lu4_A 34 PWCPFCNAEAP 44 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CcChhHHHHHH
Confidence 79999965443
No 78
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=24.01 E-value=20 Score=28.52 Aligned_cols=11 Identities=36% Similarity=1.087 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 61 ~wC~~C~~~~~ 71 (141)
T 3hxs_A 61 DWCGPCKMVAP 71 (141)
T ss_dssp TTCTTHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 69999965543
No 79
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=23.92 E-value=18 Score=27.17 Aligned_cols=11 Identities=18% Similarity=0.435 Sum_probs=8.1
Q ss_pred cccccccchhH
Q 016136 360 SSWCGECFREK 370 (394)
Q Consensus 360 ~~~c~~c~~~~ 370 (394)
+.||+.|..-.
T Consensus 31 a~~C~~C~~~~ 41 (111)
T 3gnj_A 31 RKNCHVCQKVT 41 (111)
T ss_dssp CSSCHHHHHHH
T ss_pred CCCChhHHHHH
Confidence 37999996544
No 80
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=23.75 E-value=19 Score=28.58 Aligned_cols=12 Identities=33% Similarity=1.052 Sum_probs=8.8
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 52 ~wC~~C~~~~p~ 63 (128)
T 3ul3_B 52 KWCQACTMQSTE 63 (128)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHhHH
Confidence 799999665443
No 81
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=23.74 E-value=21 Score=28.06 Aligned_cols=12 Identities=33% Similarity=1.013 Sum_probs=8.7
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 42 a~~C~~C~~~~~ 53 (121)
T 2j23_A 42 ATWCGPCKMIGP 53 (121)
T ss_dssp CTTCSTHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 379999965544
No 82
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=23.59 E-value=19 Score=28.18 Aligned_cols=12 Identities=33% Similarity=0.816 Sum_probs=8.9
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 40 a~wC~~C~~~~p 51 (116)
T 3qfa_C 40 ATWCGPSKMIKP 51 (116)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999966544
No 83
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=23.40 E-value=19 Score=28.13 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 41 ~~C~~C~~~~~ 51 (119)
T 1w4v_A 41 QWCGPCKILGP 51 (119)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965543
No 84
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=23.27 E-value=19 Score=26.78 Aligned_cols=11 Identities=36% Similarity=1.032 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (107)
T 2i4a_A 30 EWCGPCKMIGP 40 (107)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 79999965544
No 85
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.24 E-value=25 Score=28.15 Aligned_cols=13 Identities=15% Similarity=0.526 Sum_probs=9.9
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 35 a~wC~~C~~~~p~ 47 (137)
T 2dj0_A 35 ANWSNDCQSFAPI 47 (137)
T ss_dssp CTTCSTTTTTHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5899999776553
No 86
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=23.21 E-value=19 Score=28.17 Aligned_cols=13 Identities=31% Similarity=1.030 Sum_probs=9.6
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 39 a~wC~~C~~~~p~ 51 (114)
T 2oe3_A 39 ATWCGPCKMMQPH 51 (114)
T ss_dssp CTTCHHHHHTHHH
T ss_pred CCCCHHHHHHHHH
Confidence 3799999766543
No 87
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.17 E-value=21 Score=28.06 Aligned_cols=12 Identities=33% Similarity=1.052 Sum_probs=8.8
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 35 ~wC~~C~~~~p~ 46 (133)
T 2dj3_A 35 PWCGHCKQLEPI 46 (133)
T ss_dssp TTCSHHHHHHHH
T ss_pred CCChhHHHHHHH
Confidence 799999665443
No 88
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=23.13 E-value=19 Score=28.43 Aligned_cols=13 Identities=31% Similarity=0.976 Sum_probs=9.6
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 38 a~wC~~C~~~~~~ 50 (133)
T 3fk8_A 38 ANWCTDCRALDKS 50 (133)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4899999765543
No 89
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=23.09 E-value=19 Score=29.06 Aligned_cols=12 Identities=33% Similarity=1.021 Sum_probs=8.7
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.|||.|......
T Consensus 44 ~~C~~C~~~~~~ 55 (165)
T 3or5_A 44 TWCPPCRSEIPD 55 (165)
T ss_dssp TTSHHHHHHHHH
T ss_pred CcCHHHHHHHHH
Confidence 799999665443
No 90
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=23.03 E-value=20 Score=28.11 Aligned_cols=11 Identities=27% Similarity=0.573 Sum_probs=8.3
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (126)
T 2l57_A 36 DTCPYCVEMQK 46 (126)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 79999965544
No 91
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.95 E-value=20 Score=28.01 Aligned_cols=12 Identities=42% Similarity=1.193 Sum_probs=8.8
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 35 ~wC~~C~~~~~~ 46 (133)
T 1x5d_A 35 PWCGHCKNLEPE 46 (133)
T ss_dssp TTCHHHHTHHHH
T ss_pred CCCHHHHhhcHH
Confidence 799999765543
No 92
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=22.80 E-value=20 Score=28.80 Aligned_cols=10 Identities=30% Similarity=0.956 Sum_probs=7.9
Q ss_pred cccccccchh
Q 016136 360 SSWCGECFRE 369 (394)
Q Consensus 360 ~~~c~~c~~~ 369 (394)
+.||+-|...
T Consensus 40 a~wC~~C~~~ 49 (134)
T 2fwh_A 40 ADWCVACKEF 49 (134)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 4799999664
No 93
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=22.78 E-value=1.5e+02 Score=22.52 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=24.2
Q ss_pred ecCCCceEEEecCCCCcCCccCCccceeEEEee
Q 016136 311 YSHVPGRAVLHRGRHRHGARATTSGHRVNLLLW 343 (394)
Q Consensus 311 ~~~~~G~AlLHpGrh~HeglpVTsG~RynLV~W 343 (394)
+...+|.+++.+....|...... ..++.+|.+
T Consensus 80 ~~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~~ 111 (115)
T 1yhf_A 80 YRVAEGQTIVMPAGIPHALYAVE-AFQMLLVVV 111 (115)
T ss_dssp EEEETTCEEEECTTSCEEEEESS-CEEEEEEEE
T ss_pred EEECCCCEEEECCCCCEEEEECC-CceEEEEEE
Confidence 35688999999999999988765 456655543
No 94
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=22.76 E-value=20 Score=28.19 Aligned_cols=12 Identities=42% Similarity=1.265 Sum_probs=8.7
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 32 a~wC~~C~~~~~ 43 (118)
T 2f51_A 32 ATWCGPCQRLGQ 43 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999965443
No 95
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=22.73 E-value=20 Score=28.02 Aligned_cols=11 Identities=45% Similarity=1.138 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 44 ~~C~~C~~~~~ 54 (145)
T 3erw_A 44 SWCPPCKKELP 54 (145)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966443
No 96
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=22.72 E-value=20 Score=27.34 Aligned_cols=10 Identities=40% Similarity=1.218 Sum_probs=7.5
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.||+-|....
T Consensus 32 ~~C~~C~~~~ 41 (138)
T 4evm_A 32 SWCSICLASL 41 (138)
T ss_dssp TTCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 8999995443
No 97
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=22.69 E-value=20 Score=28.68 Aligned_cols=10 Identities=50% Similarity=1.278 Sum_probs=7.6
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.||+.|....
T Consensus 52 ~~C~~C~~~~ 61 (156)
T 1kng_A 52 SWCVPCHDEA 61 (156)
T ss_dssp TTCHHHHHHH
T ss_pred ccCHhHHHHH
Confidence 7999996543
No 98
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=22.55 E-value=20 Score=28.49 Aligned_cols=14 Identities=36% Similarity=0.724 Sum_probs=10.0
Q ss_pred ccccccccchhHHH
Q 016136 359 FSSWCGECFREKKE 372 (394)
Q Consensus 359 f~~~c~~c~~~~~~ 372 (394)
++.||+-|......
T Consensus 46 ~a~wC~~C~~~~~~ 59 (124)
T 1xfl_A 46 TASWCGPCRFIAPF 59 (124)
T ss_dssp ECTTCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHH
Confidence 45899999665543
No 99
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=22.43 E-value=20 Score=28.74 Aligned_cols=11 Identities=36% Similarity=1.087 Sum_probs=8.5
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.....
T Consensus 48 ~wC~~C~~~~~ 58 (136)
T 2l5l_A 48 DWCGPCKMVAP 58 (136)
T ss_dssp TTSHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 79999966554
No 100
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=22.38 E-value=19 Score=27.81 Aligned_cols=12 Identities=42% Similarity=1.027 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|...+.
T Consensus 27 a~~C~~C~~~~~ 38 (116)
T 2e7p_A 27 KTYCGYCNRVKQ 38 (116)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChhHHHHHH
Confidence 379999965544
No 101
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=22.29 E-value=21 Score=26.96 Aligned_cols=12 Identities=33% Similarity=0.825 Sum_probs=8.6
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 35 ~~~C~~C~~~~~ 46 (113)
T 1ti3_A 35 ASWCPPCKMIAP 46 (113)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999965443
No 102
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=22.01 E-value=21 Score=27.59 Aligned_cols=12 Identities=42% Similarity=1.054 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 43 ~~~C~~C~~~~~ 54 (122)
T 2vlu_A 43 ASWCGPCRIMAP 54 (122)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999965544
No 103
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.74 E-value=22 Score=28.17 Aligned_cols=12 Identities=42% Similarity=1.151 Sum_probs=8.9
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+-|......
T Consensus 44 ~wC~~C~~~~p~ 55 (140)
T 2dj1_A 44 PWCGHCKQFAPE 55 (140)
T ss_dssp TTCHHHHTTHHH
T ss_pred CCCHHHHHhhHH
Confidence 799999765543
No 104
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=21.72 E-value=22 Score=27.95 Aligned_cols=10 Identities=20% Similarity=0.314 Sum_probs=7.5
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.||+-|....
T Consensus 39 ~~C~~C~~~~ 48 (148)
T 2b5x_A 39 ISCHLCKEAM 48 (148)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHh
Confidence 6999996543
No 105
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=21.65 E-value=22 Score=28.05 Aligned_cols=11 Identities=9% Similarity=0.456 Sum_probs=8.5
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|.+...
T Consensus 43 ~wC~~C~~~~p 53 (127)
T 3h79_A 43 PWSRHSVAAMR 53 (127)
T ss_dssp TTCHHHHHHHH
T ss_pred CccHHHHHHhH
Confidence 79999966544
No 106
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=21.64 E-value=22 Score=27.08 Aligned_cols=12 Identities=42% Similarity=1.046 Sum_probs=8.8
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+.|.....
T Consensus 37 ~~~C~~C~~~~~ 48 (118)
T 2vm1_A 37 ASWCGPCRVIAP 48 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 479999965543
No 107
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=21.63 E-value=19 Score=28.53 Aligned_cols=10 Identities=20% Similarity=0.544 Sum_probs=8.0
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.|||-|..+-
T Consensus 37 ~~C~~C~~~~ 46 (142)
T 3ewl_A 37 PDCSNCRKFE 46 (142)
T ss_dssp SSCHHHHHHH
T ss_pred CCCccHHHHH
Confidence 7999997753
No 108
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=21.38 E-value=22 Score=28.67 Aligned_cols=11 Identities=45% Similarity=1.389 Sum_probs=8.4
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.|||-|.....
T Consensus 34 ~wC~~C~~~~~ 44 (151)
T 3raz_A 34 TWCGPCRKEMP 44 (151)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 79999966544
No 109
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=21.12 E-value=2.4e+02 Score=22.15 Aligned_cols=33 Identities=18% Similarity=0.062 Sum_probs=24.4
Q ss_pred ecCCCceEEEecCCCCcCCccCCcc--ceeEEEee
Q 016136 311 YSHVPGRAVLHRGRHRHGARATTSG--HRVNLLLW 343 (394)
Q Consensus 311 ~~~~~G~AlLHpGrh~HeglpVTsG--~RynLV~W 343 (394)
+...+|..++.|....|....++.. ..|+.|.|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 3578999999999999998877754 33444443
No 110
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=20.66 E-value=23 Score=29.33 Aligned_cols=12 Identities=33% Similarity=0.994 Sum_probs=9.1
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.|||-|.....
T Consensus 57 a~wC~~C~~~~p 68 (154)
T 2ju5_A 57 SDWCMWCIKMQD 68 (154)
T ss_dssp TTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 489999976554
No 111
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=20.65 E-value=23 Score=28.19 Aligned_cols=10 Identities=30% Similarity=0.610 Sum_probs=7.7
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.|||-|....
T Consensus 38 ~wC~~C~~~~ 47 (144)
T 1i5g_A 38 SWCPPSRAFT 47 (144)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 7999996544
No 112
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=20.47 E-value=24 Score=28.13 Aligned_cols=12 Identities=25% Similarity=0.761 Sum_probs=9.0
Q ss_pred cccccccchhHH
Q 016136 360 SSWCGECFREKK 371 (394)
Q Consensus 360 ~~~c~~c~~~~~ 371 (394)
+.||+-|.....
T Consensus 55 a~wC~~C~~~~~ 66 (139)
T 3d22_A 55 ARWCGPSRQIAP 66 (139)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 579999966544
No 113
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=25.77 E-value=21 Score=28.03 Aligned_cols=11 Identities=27% Similarity=0.797 Sum_probs=8.2
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.|||-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (143)
T 2lus_A 36 HWCPPCRGFTP 46 (143)
Confidence 79999965543
No 114
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=20.30 E-value=24 Score=27.04 Aligned_cols=12 Identities=33% Similarity=0.971 Sum_probs=8.7
Q ss_pred ccccccchhHHH
Q 016136 361 SWCGECFREKKE 372 (394)
Q Consensus 361 ~~c~~c~~~~~~ 372 (394)
.||+.|......
T Consensus 40 ~~C~~C~~~~~~ 51 (121)
T 2i1u_A 40 TWCGPCKMVAPV 51 (121)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999655543
No 115
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=20.22 E-value=25 Score=28.05 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=8.3
Q ss_pred ccccccchhHH
Q 016136 361 SWCGECFREKK 371 (394)
Q Consensus 361 ~~c~~c~~~~~ 371 (394)
.||+-|..+-.
T Consensus 41 ~wC~~C~~~~~ 51 (142)
T 3eur_A 41 PGCHACAEMIE 51 (142)
T ss_dssp SSSHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 79999966543
No 116
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=20.18 E-value=27 Score=28.50 Aligned_cols=10 Identities=30% Similarity=1.092 Sum_probs=7.8
Q ss_pred ccccccchhH
Q 016136 361 SWCGECFREK 370 (394)
Q Consensus 361 ~~c~~c~~~~ 370 (394)
.||+.|...-
T Consensus 47 ~~C~~C~~~~ 56 (165)
T 3ha9_A 47 AWCPSCVYMA 56 (165)
T ss_dssp TTCTTHHHHH
T ss_pred CCCcchhhhH
Confidence 7999996544
No 117
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=20.07 E-value=24 Score=28.23 Aligned_cols=13 Identities=23% Similarity=0.570 Sum_probs=9.5
Q ss_pred cccccccchhHHH
Q 016136 360 SSWCGECFREKKE 372 (394)
Q Consensus 360 ~~~c~~c~~~~~~ 372 (394)
+.||+-|......
T Consensus 49 a~wC~~C~~~~p~ 61 (128)
T 2o8v_B 49 AEWCGPAKMIAPI 61 (128)
T ss_dssp CSSCHHHHHTHHH
T ss_pred CCCCHHHHHHhHH
Confidence 4899999765443
Done!