BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016141
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3STY|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I T18a
Mutant
pdb|3STY|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I T18a
Mutant
Length = 267
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
HFVLVH GAWCWYK + L++ SG V A+DL SG++ I + Y+ PL++
Sbjct: 14 HFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEF 73
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGS 261
L EK+ILVGH GG IS ME FP K++ AVF++ M A T+ + GS
Sbjct: 74 MASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDA-TTVCTKAGS 132
Query: 262 NDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAPVLE 321
L Q Y NG NPPT++ ++ S +D+ LA +RP+ + + E
Sbjct: 133 AVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPL-YLYLAE 191
Query: 322 KLS----VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+S +S YGSV R +I ++ A+ + MI NPP+ V EI+GSDH SK
Sbjct: 192 DISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSK 251
Query: 378 PRALHRILVEIS 389
P+ L L+ I+
Sbjct: 252 PQQLFTTLLSIA 263
>pdb|3STT|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I Apo
Form
pdb|3STT|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I Apo
Form
pdb|3STU|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With Methyl-3-Hydroxydodecanoate
pdb|3STU|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With Methyl-3-Hydroxydodecanoate
pdb|3STV|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 3- Hydroxyoctanoate
pdb|3STV|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 3- Hydroxyoctanoate
pdb|3STW|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 2- Tridecanone
pdb|3STW|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I
Complexed With 2- Tridecanone
Length = 267
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 133/252 (52%), Gaps = 6/252 (2%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
HFVLVH GAWCWYK + L++ SG V A+DL SG++ I + Y+ PL++
Sbjct: 14 HFVLVHTAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEF 73
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGS 261
L EK+ILVGH GG IS ME FP K++ AVF++ M A T+ + GS
Sbjct: 74 MASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDA-TTVCTKAGS 132
Query: 262 NDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAPVLE 321
L Q Y NG NPPT++ ++ S +D+ LA +RP+ + + E
Sbjct: 133 AVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPL-YLYLAE 191
Query: 322 KLS----VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+S +S YGSV R +I ++ A+ + MI NPP+ V EI+GSDH SK
Sbjct: 192 DISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDHVTMMSK 251
Query: 378 PRALHRILVEIS 389
P+ L L+ I+
Sbjct: 252 PQQLFTTLLSIA 263
>pdb|3STX|A Chain A, Crystal Structure Of Tomato Methylketone Synthase I H243a
Variant Complexed With Beta-Ketoheptanoate
pdb|3STX|B Chain B, Crystal Structure Of Tomato Methylketone Synthase I H243a
Variant Complexed With Beta-Ketoheptanoate
Length = 267
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
HFVLVH GAWCWYK + L++ SG V A+DL SG++ I + Y+ PL++
Sbjct: 14 HFVLVHTAFHGAWCWYKIVALMRSSGHNVTALDLGASGINPKQALQIPNFSDYLSPLMEF 73
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGS 261
L EK+ILVGH GG IS ME FP K++ AVF++ M A T+ + GS
Sbjct: 74 MASLPANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDA-TTVCTKAGS 132
Query: 262 NDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAPVLE 321
L Q Y NG NPPT++ ++ S +D+ LA +RP+ + + E
Sbjct: 133 AVLGQLDNCVTYENGPTNPPTTLIAGPKFLATNVYHLSPIEDLALATALVRPL-YLYLAE 191
Query: 322 KLS----VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+S +S YGSV R +I ++ A+ + MI NPP+ V EI+GSD SK
Sbjct: 192 DISKEVVLSSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPPDEVKEIEGSDAVTMMSK 251
Query: 378 PRALHRILVEIS 389
P+ L L+ I+
Sbjct: 252 PQQLFTTLLSIA 263
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 5/255 (1%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
+ HFVLVHGG GAW WYK LL+ +G KV AVDL+ +G++ + I + Y +PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQ- 257
++ + +EKV+L+GH FGG + ME +P K++ AVF++A M S +
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKY 128
Query: 258 -QMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRP--I 314
+ D+M +Q Y N +NP S+ F + +D+ELA + RP +
Sbjct: 129 NEKCPADMMLDSQFSTYGN-PENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSL 187
Query: 315 PFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374
F + + S + YGSV R YI +D + PV Q+ + S + V EIK +DH
Sbjct: 188 FFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGM 247
Query: 375 FSKPRALHRILVEIS 389
S+PR + + L++IS
Sbjct: 248 LSQPREVXKCLLDIS 262
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 135/255 (52%), Gaps = 5/255 (1%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
+ HFVLVHGG GAW WYK LL+ +G KV AVDL+ +G++ + I + Y +PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQ- 257
++ + +EKV+L+GH FGG + ME +P K++ AVF++A M S +
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKY 128
Query: 258 -QMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRP--I 314
+ D+M +Q Y N +NP S+ F + +D+ELA + RP +
Sbjct: 129 NEKCPADMMLDSQFSTYGN-PENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSL 187
Query: 315 PFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374
F + + S + YGSV R YI +D + PV Q+ + S + V EIK +DH
Sbjct: 188 FFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADHMGM 247
Query: 375 FSKPRALHRILVEIS 389
S+PR + + L++IS
Sbjct: 248 LSQPREVXKXLLDIS 262
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 134/255 (52%), Gaps = 5/255 (1%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
+ HFVLVHGG GAW WYK LL+ +G KV AVDL+ +G++ + I + Y +PL
Sbjct: 9 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 68
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQ- 257
++ + +EKV+L+GH FGG + ME +P K++ AVF++A M S +
Sbjct: 69 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKY 128
Query: 258 -QMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRP--I 314
+ D+M +Q Y N +NP S+ F + +D+ELA + RP +
Sbjct: 129 NEKCPADMMLDSQFSTYGN-PENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSL 187
Query: 315 PFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374
F + + S + YGSV R YI +D + PV Q+ + S + V EIK +D
Sbjct: 188 FFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADAMGM 247
Query: 375 FSKPRALHRILVEIS 389
S+PR + + L++IS
Sbjct: 248 LSQPREVCKCLLDIS 262
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 134/255 (52%), Gaps = 5/255 (1%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
+ HFVLVHGG GAW WYK LL+ +G KV AVDL+ +G++ + I + Y +PL
Sbjct: 3 QQKHFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPL 62
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQ- 257
++ + +EKV+L+GH FGG + ME +P K++ AVF++A M S +
Sbjct: 63 MEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKY 122
Query: 258 -QMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRP--I 314
+ D+M +Q Y N +NP S+ F + +D+ELA + RP +
Sbjct: 123 NEKCPADMMLDSQFSTYGN-PENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSL 181
Query: 315 PFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374
F + + S + YGSV R YI +D + PV Q+ + S + V EIK +D
Sbjct: 182 FFQDLAKAKKFSTERYGSVKRAYIFCNEDKSFPVEFQKWFVESVGADKVKEIKEADAMGM 241
Query: 375 FSKPRALHRILVEIS 389
S+PR + + L++IS
Sbjct: 242 LSQPREVCKCLLDIS 256
>pdb|3DQZ|A Chain A, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|B Chain B, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|C Chain C, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
pdb|3DQZ|D Chain D, Structure Of The Hydroxynitrile Lyase From Arabidopsis
Thaliana
Length = 258
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 125/268 (46%), Gaps = 39/268 (14%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
HFVLVH GAW WYK LL+ +G +V AV+L SG+ ++ ++++Y KPLI+T
Sbjct: 6 HFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELAASGIDPRPIQAVETVDEYSKPLIET 65
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS-------------- 247
L E+VILVG FGG I+ ++FP+K+ VF+ A + +
Sbjct: 66 LKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEM 125
Query: 248 ----GQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKD 303
G + + G+ L++ F+ A QN P +D
Sbjct: 126 PGGLGDCEFSSHETRNGTMSLLKMGPKFMKARLYQNCPI-------------------ED 166
Query: 304 VELALISMRPIPF--APVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPE 361
ELA + R F + +K S++ YGSV R Y+ + +D AIP MI++
Sbjct: 167 YELAKMLHRQGSFFTEDLSKKEKFSEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVS 226
Query: 362 LVFEIKGSDHAPFFSKPRALHRILVEIS 389
V+EI G DH SKP+ L L I+
Sbjct: 227 KVYEIDGGDHMVMLSKPQKLFDSLSAIA 254
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
E HFVLVHG G W WYK LL+ +G KV A+DL SG + +L Y PL
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 62
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA---LDTI 255
+ L +EKVILVGH GG + E +P K+ AVF+AA S ++ L+
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVHNSSFVLEQY 122
Query: 256 SQQMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP 315
+++ + + + FL + P TS + + +D+ LA +RP
Sbjct: 123 NERTPAENWLDTQ--FLPYGSPEEPLTSXFFGPKFLAHKLYQLCSPEDLALASSLVRPSS 180
Query: 316 -FAPVLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAP 373
F L K +D+ +GSV R YI +D IP Q I++ EIKG+DH
Sbjct: 181 LFXEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHXA 240
Query: 374 FFSKPRALHRILVEIS 389
+P+ L L+EI+
Sbjct: 241 XLCEPQKLCASLLEIA 256
>pdb|3RKT|A Chain A, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|B Chain B, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|C Chain C, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|D Chain D, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|E Chain E, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|F Chain F, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|G Chain G, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
pdb|3RKT|H Chain H, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) 3kp Triple Mutant
Length = 258
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 122/252 (48%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 3 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 62
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 63 TFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 122
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MRP F
Sbjct: 123 ESFPDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRPGSLFQN 182
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+P+ YI T QD Q I + PP+ V++++G DH +K
Sbjct: 183 VLAQRPKFTEKGYGSIPKVYIWTDQDKIFLPDFQRWQIANYPPDKVYQVQGGDHKLQLTK 242
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 243 TEEVAHILQEVA 254
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
Length = 268
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/256 (32%), Positives = 121/256 (47%), Gaps = 7/256 (2%)
Query: 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL 198
E HFVLVHG G W WYK LL+ +G KV A+DL SG + +L Y PL
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHKVTALDLAASGTDLRKIEELRTLYDYTLPL 62
Query: 199 IDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA---LDTI 255
+ L +EKVILVGH GG + E +P K+ AVF+AA S ++ L+
Sbjct: 63 XELXESLSADEKVILVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXPDSVHNSSFVLEQY 122
Query: 256 SQQMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP 315
+++ + + + FL + P TS + + +D+ LA +RP
Sbjct: 123 NERTPAENWLDTQ--FLPYGSPEEPLTSXFFGPKFLAHKLYQLCSPEDLALASSLVRPSS 180
Query: 316 -FAPVLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAP 373
F L K +D+ +GSV R YI +D IP Q I++ EIKG+DH
Sbjct: 181 LFXEDLSKAKYFTDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVTEAIEIKGADHXA 240
Query: 374 FFSKPRALHRILVEIS 389
+P+ L L+EI+
Sbjct: 241 XLCEPQKLCASLLEIA 256
>pdb|3RKS|A Chain A, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|B Chain B, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|C Chain C, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
pdb|3RKS|D Chain D, Crystal Structure Of The Manihot Esculenta Hydroxynitrile
Lyase (Mehnl) K176p Mutant
Length = 258
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 3 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 62
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 63 TFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 122
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MRP F
Sbjct: 123 ESFPDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRPGSLFQN 182
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+ + YI T QD Q I + P+ V++++G DH +K
Sbjct: 183 VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTK 242
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 243 TEEVAHILQEVA 254
>pdb|1DWQ|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWQ|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
Length = 262
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 7 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 66
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 67 TFLEKLPQGEKVIIVGESXAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 126
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MR F
Sbjct: 127 ESFPDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQN 186
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+ + YI T QD Q I + P+ V++++G DH +K
Sbjct: 187 VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTK 246
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 247 TEEVAHILQEVA 258
>pdb|1DWO|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWO|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Substrates Acetone And
Chloroacetone:implications For The Mechanism Of
Cyanogenesis
pdb|1DWP|A Chain A, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta At 2.2 Angstrom Resolution
pdb|1DWP|B Chain B, Crystal Structure Of Hydroxynitrile Lyase From Manihot
Esculenta At 2.2 Angstrom Resolution
Length = 262
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 7 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 66
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 67 TFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 126
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MR F
Sbjct: 127 ESFPDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQN 186
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+ + YI T QD Q I + P+ V++++G DH +K
Sbjct: 187 VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTK 246
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 247 TEEVAHILQEVA 258
>pdb|1EB8|A Chain A, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB8|B Chain B, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB9|A Chain A, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
pdb|1EB9|B Chain B, Structure Determinants Of Substrate Specificity Of
Hydroxynitrile Lyase From Manihot Esculenta
Length = 262
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 7 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 66
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 67 TFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 126
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MR F
Sbjct: 127 ESFPDARDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQN 186
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+ + YI T QD Q I + P+ V++++G DH +K
Sbjct: 187 VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTK 246
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 247 TEEVAHILQEVA 258
>pdb|1E89|A Chain A, On The Mechanism Of Cyanogenesis Catalyzed By
Hydroxynitrile Lyase From Manihot Esculenta. Crystal
Structure Of Active Site Mutant Ser80ala In Complex With
Acetone Cyanohydrin
pdb|1E89|B Chain B, On The Mechanism Of Cyanogenesis Catalyzed By
Hydroxynitrile Lyase From Manihot Esculenta. Crystal
Structure Of Active Site Mutant Ser80ala In Complex With
Acetone Cyanohydrin
pdb|1E8D|A Chain A, Mechanistic Aspects Of Cyanogenesis From Active Site
Mutant Ser80ala Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Acetone Cyanohydrin
pdb|1E8D|B Chain B, Mechanistic Aspects Of Cyanogenesis From Active Site
Mutant Ser80ala Of Hydroxynitrile Lyase From Manihot
Esculenta In Complex With Acetone Cyanohydrin
Length = 262
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI 199
T+HFVL+H GAW W+K L+ +G KV A+D+ SG+ I S ++Y +PL+
Sbjct: 7 TAHFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLL 66
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L EKVI+VG G I+ + + K+A VF + + + S T+ + +
Sbjct: 67 TFLEKLPQGEKVIIVGEACAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLL 126
Query: 260 GSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIP-FAP 318
S + + F + N T++ F + + ELA + MR F
Sbjct: 127 ESFPDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQN 186
Query: 319 VL-EKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
VL ++ ++ YGS+ + YI T QD Q I + P+ V++++G DH +K
Sbjct: 187 VLAQRPKFTEKGYGSIKKVYIWTDQDKIFLPDFQRWQIANYKPDKVYQVQGGDHKLQLTK 246
Query: 378 PRALHRILVEIS 389
+ IL E++
Sbjct: 247 TEEVAHILQEVA 258
>pdb|2G4L|A Chain A, Anomalous Substructure Of Hydroxynitrile Lyase
Length = 257
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
+HFVL+H GAW W+K LL+ G KV A+DL SGV I S ++Y +PL+
Sbjct: 4 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLT 63
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
L EKVILVG GG I+ + + K+A AVF + + + + + M
Sbjct: 64 FLEALPPGEKVILVGESCGGLNIAIAADKYXEKIAAAVFHNSVLPDTEHCPSYVVDKLME 123
Query: 261 SNDLMQQAQIFLYA-NGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELA-LISMRPIPFAP 318
+ F Y +GK+ T + + ++ ELA +++ + F
Sbjct: 124 VFPDWKDTTYFTYTKDGKE--ITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQN 181
Query: 319 VLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+L K + + YGS+ + Y+ T QD Q I + P+ V++++G DH +K
Sbjct: 182 ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTK 241
Query: 378 PRALHRILVEIS 389
+ + IL E++
Sbjct: 242 TKEIAEILQEVA 253
>pdb|1YAS|A Chain A, Hydroxynitrile Lyase Complexed With Histidine
pdb|7YAS|A Chain A, Hydroxynitrile Lyase, Low Temperature Native Structure
pdb|2YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis Complexed
With Rhodanide
pdb|3YAS|A Chain A, Hydroxynitrile Lyase Complexed With Acetone
pdb|4YAS|A Chain A, Hydroxynitrile Lyase Complexed With Chloralhydrate
pdb|5YAS|A Chain A, Hydroxynitrile Lyase Complexed With Hexafluoroacetone
pdb|6YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis, Room
Temperature Structure
pdb|1QJ4|A Chain A, Hydroxynitrile-lyase From Hevea Brasiliensis At Atomic
Resolution
pdb|1SC9|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With The Natural Substrate Acetone Cyanohydrin
pdb|3C6X|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C6Y|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C6Z|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
pdb|3C70|A Chain A, Hnl From Hevea Brasiliensis To Atomic Resolution
Length = 257
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
+HFVL+H GAW W+K LL+ G KV A+DL SGV I S ++Y +PL+
Sbjct: 4 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLT 63
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
L EKVILVG GG I+ + + K+A AVF + + + + + M
Sbjct: 64 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 123
Query: 261 SNDLMQQAQIFLYA-NGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELA-LISMRPIPFAP 318
+ F Y +GK+ T + + ++ ELA +++ + F
Sbjct: 124 VFPDWKDTTYFTYTKDGKE--ITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQN 181
Query: 319 VLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+L K + + YGS+ + Y+ T QD Q I + P+ V++++G DH +K
Sbjct: 182 ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTK 241
Query: 378 PRALHRILVEIS 389
+ + IL E++
Sbjct: 242 TKEIAEILQEVA 253
>pdb|1YB6|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With Mandelonitrile
pdb|1YB7|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis In Complex
With 2,3- Dimethyl-2-Hydroxy-Butyronitrile
Length = 256
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
+HFVL+H GAW W+K LL+ G KV A+DL SGV I S ++Y +PL+
Sbjct: 3 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLT 62
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
L EKVILVG GG I+ + + K+A AVF + + + + + M
Sbjct: 63 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 122
Query: 261 SNDLMQQAQIFLYA-NGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELA-LISMRPIPFAP 318
+ F Y +GK+ T + + ++ ELA +++ + F
Sbjct: 123 VFPDWKDTTYFTYTKDGKE--ITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQN 180
Query: 319 VLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+L K + + YGS+ + Y+ T QD Q I + P+ V++++G DH +K
Sbjct: 181 ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTK 240
Query: 378 PRALHRILVEIS 389
+ + IL E++
Sbjct: 241 TKEIAEILQEVA 252
>pdb|1SCI|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis
pdb|1SCK|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis In Complex With Acetone
pdb|1SCQ|A Chain A, K236l Mutant Of Hydroxynitrile Lyase From Hevea
Brasiliensis In Complex With Acetonecyanohydrin
Length = 257
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 5/252 (1%)
Query: 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
+HFVL+H GAW W+K LL+ G KV A+DL SGV I S ++Y +PL+
Sbjct: 4 AHFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLT 63
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
L EKVILVG GG I+ + + K+A AVF + + + + + M
Sbjct: 64 FLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLME 123
Query: 261 SNDLMQQAQIFLYA-NGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELA-LISMRPIPFAP 318
+ F Y +GK+ T + + ++ ELA +++ + F
Sbjct: 124 VFPDWKDTTYFTYTKDGKE--ITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQN 181
Query: 319 VLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377
+L K + + YGS+ + Y+ T QD Q I + P+ V++++G DH +K
Sbjct: 182 ILAKRPFFTKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEGGDHLLQLTK 241
Query: 378 PRALHRILVEIS 389
+ + IL E++
Sbjct: 242 TKEIAEILQEVA 253
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 126 HQLVNQEPKIESPETSHFV---------LVHGGGFGAWCWYKTMTLLKESGFKVDAVDLT 176
H V +P++ HFV L HG + W + L ++G++V A+D+
Sbjct: 239 HGYVTVKPRVRL----HFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMK 294
Query: 177 GSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKV 234
G G SS +E K ++ ++LG + V +GHD+GG + Y+ +P +V
Sbjct: 295 GYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERV 352
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 126 HQLVNQEPKIESPETSHFV---------LVHGGGFGAWCWYKTMTLLKESGFKVDAVDLT 176
H V +P++ HFV L HG + W + L ++G++V A+D+
Sbjct: 35 HGYVTVKPRVRL----HFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMK 90
Query: 177 GSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKV 234
G G SS +E K ++ ++LG + V +GHD+GG + Y+ +P +V
Sbjct: 91 GYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERV 148
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 126 HQLVNQEPKIESPETSHFV---------LVHGGGFGAWCWYKTMTLLKESGFKVDAVDLT 176
H V +P++ HFV L HG + W + L ++G++V A+D+
Sbjct: 20 HGYVTVKPRVRL----HFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMK 75
Query: 177 GSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKV 234
G G SS +E K ++ ++LG + V +GHD+GG + Y+ +P +V
Sbjct: 76 GYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAV-FIGHDWGGMLVWYMALFYPERV 133
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+L HG F A W +T+ +L ++G++V AVD G SS + S +Q
Sbjct: 50 LLXHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSSKPAHYQYSFQQLAANTHALLE 109
Query: 204 ELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFI 240
LG + ++GH GG + L+P +V + V +
Sbjct: 110 RLGV-ARASVIGHSXGGXLATRYALLYPRQVERLVLV 145
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQY-----VKP 197
L HG + W + L ++GF+V A+D+ G G D++S +E+Y K
Sbjct: 259 LCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYG----DSSSPPEIEEYAMELLCKE 314
Query: 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKV 234
++ ++LG + V +GHD+ G + + +P +V
Sbjct: 315 MVTFLDKLGIPQAV-FIGHDWAGVMVWNMALFYPERV 350
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
Query: 124 RPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS- 182
R H + + P + P VL+HG + W + L +G++V A+D G G SS
Sbjct: 20 RIHAVADSPPDQQGPLV---VLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSK 76
Query: 183 CDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAA 242
+++ V ++ + G E+ + VGHD+G L P + A V I+
Sbjct: 77 YRVQKAYRIKELVGDVVGVLDSYGAEQAFV-VGHDWGAPVAWTFAWLHPDRCAGVVGISV 135
Query: 243 TMLTSGQSAL 252
G L
Sbjct: 136 PFAGRGVIGL 145
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
Query: 124 RPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS- 182
R H + + P + P VL+HG + W + L +G++V A+D G G SS
Sbjct: 14 RIHAVADSPPDQQGPLV---VLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSK 70
Query: 183 CDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAA 242
+++ V ++ + G E+ + VGHD+G L P + A V I+
Sbjct: 71 YRVQKAYRIKELVGDVVGVLDSYGAEQAFV-VGHDWGAPVAWTFAWLHPDRCAGVVGISV 129
Query: 243 TMLTSGQSAL 252
G L
Sbjct: 130 PFAGRGVIGL 139
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---CDTNSITSLEQYVKPLID 200
+ +HG + W M L E G++ A DL G G ++ + S S+ V ++
Sbjct: 35 LFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVA 94
Query: 201 TFNELG-NEEKVILVGHDFGGACISYVMELF-PSKVAKAV 238
+ NEEKV +V HD+ GA I++ + LF P KV V
Sbjct: 95 LLEAIAPNEEKVFVVAHDW-GALIAWHLCLFRPDKVKALV 133
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---CDTNSITSLEQYVKPLID 200
+ +HG + W M L E G++ A DL G G ++ + S S+ V ++
Sbjct: 35 LFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLNDPSKFSILHLVGDVVA 94
Query: 201 TFNELG-NEEKVILVGHDFGGACISYVMELF-PSKVAKAV 238
+ NEEKV +V HD+ GA I++ + LF P KV V
Sbjct: 95 LLEAIAPNEEKVFVVAHDW-GALIAWHLCLFRPDKVKALV 133
>pdb|1U2E|A Chain A, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|B Chain B, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|C Chain C, Crystal Structure Of The C-C Bond Hydrolase Mhpc
pdb|1U2E|D Chain D, Crystal Structure Of The C-C Bond Hydrolase Mhpc
Length = 289
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 144 VLVHGGGFGAWCWY---KTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
VL+HG G GA W + + L E+G++V +D G G S NS + + + L
Sbjct: 40 VLLHGSGPGATGWANFSRNIDPLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLNARILKS 99
Query: 201 TFNELGNEEKVILVGHDFGG-ACISYVMELFPSKVAKAVFIAAT---------MLTSGQS 250
++L + K+ L+G+ GG + +++ ++ +P +V K V + M T G
Sbjct: 100 VVDQL-DIAKIHLLGNSMGGHSSVAFTLK-WPERVGKLVLMGGGTGGMSLFTPMPTEGIK 157
Query: 251 ALDTISQQMGSNDLMQQAQIFLY 273
L+ + +Q +L IF++
Sbjct: 158 RLNQLYRQPTIENLKLMMDIFVF 180
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
VL+HG F + WY + S ++ AVD+ G S N + Y L+D F
Sbjct: 70 LVLLHGALFSSTXWYPNIADWS-SKYRTYAVDIIGDKNKSIPENVSGTRTDYANWLLDVF 128
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIA 241
+ LG EK +G GG + P +V A ++
Sbjct: 129 DNLG-IEKSHXIGLSLGGLHTXNFLLRXPERVKSAAILS 166
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Query: 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS-----CDTNSITSL 191
SPE + +HG W + L G++V A DL G G SS +S+T L
Sbjct: 23 SPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFL 82
Query: 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFI 240
Q ID + ++ ++LVGH G + + + P K+ + + +
Sbjct: 83 AQ-----IDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILV 126
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---CDTNSITSLEQYVKPLI 199
VL HG G W + L + ++V D G+G ++ D + ++LE Y LI
Sbjct: 22 IVLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLI 80
Query: 200 DTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM 259
+L E I VGH +S ++ + S +F M+++ ++ + Q
Sbjct: 81 AILEDL-KIESCIFVGH-----SVSAMIGVLASLNRPDLFSKIVMISASPRYVNDVDYQG 134
Query: 260 G--SNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFA 317
G DL Q L+ + N + A ++ L +MRP
Sbjct: 135 GFEQEDLNQ-----LFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIAL 189
Query: 318 PVLEKLSVSDDN----YGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD-HA 372
V + + SD + +VP +++++D A+PV V E + + E V E+ SD H
Sbjct: 190 SVGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHL 249
Query: 373 PFFSKPRAL 381
P S P ++
Sbjct: 250 PQLSSPDSV 258
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 22/248 (8%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---CDTNSITSLEQYVKPLID 200
VL HG G W + L + ++V D G+G ++ D + ++LE Y LI
Sbjct: 21 VLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLIA 79
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
+L E I VGH +S ++ + S +F M+++ ++ + Q G
Sbjct: 80 ILEDL-KIESCIFVGH-----SVSAMIGVLASLNRPDLFSKIVMISASPRYVNDVDYQGG 133
Query: 261 --SNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAP 318
DL Q L+ + N + A ++ L +MRP
Sbjct: 134 FEQEDLNQ-----LFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIALS 188
Query: 319 VLEKLSVSDDN----YGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD-HAP 373
V + + SD + +VP +++++D A+PV V E + + E V E+ SD H P
Sbjct: 189 VGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLP 248
Query: 374 FFSKPRAL 381
S P ++
Sbjct: 249 QLSSPDSV 256
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 102/248 (41%), Gaps = 22/248 (8%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---CDTNSITSLEQYVKPLID 200
VL HG G W + L + ++V D G+G ++ D + ++LE Y LI
Sbjct: 39 VLGHGFGTDQSVWKHLVPHLVDD-YRVVLYDNMGAGTTNPDYFDFDRYSNLEGYSFDLIA 97
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG 260
+L E I VGH +S ++ + S +F M+++ ++ + Q G
Sbjct: 98 ILEDL-KIESCIFVGH-----SVSAMIGVLASLNRPDLFSKIVMISASPRYVNDVDYQGG 151
Query: 261 --SNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAP 318
DL Q L+ + N + A ++ L +MRP
Sbjct: 152 FEQEDLNQ-----LFEAIRSNYKAWCLGFAPLAVGGDMDSIAVQEFSRTLFNMRPDIALS 206
Query: 319 VLEKLSVSDDN----YGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD-HAP 373
V + + SD + +VP +++++D A+PV V E + + E V E+ SD H P
Sbjct: 207 VGQTIFQSDMRQILPFVTVPCHILQSVKDLAVPVVVSEYLHANLGCESVVEVIPSDGHLP 266
Query: 374 FFSKPRAL 381
S P ++
Sbjct: 267 QLSSPDSV 274
>pdb|1EX9|A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Lipase
Complexed With
Rc-(Rp,Sp)-1,2-Dioctylcarbamoyl-Glycero-3-O-
Octylphosphonate
Length = 285
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 143 FVLVHGG-GF----GAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKP 197
VL HG GF G W+ + L+ G +V + VS DT+ + EQ ++
Sbjct: 10 IVLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTE-----VSQLDTSEVRG-EQLLQQ 63
Query: 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAA 242
++ L + KV L+GH GG I YV + P +A A + A
Sbjct: 64 -VEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGA 107
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 13/127 (10%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG 206
HG A W + G++V A D G G SS + ++ Y + LG
Sbjct: 29 HGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVWDG-HDMDHYADDVAAVVAHLG 87
Query: 207 NEEKVILVGHDFGGACISYVMELFP-SKVAKAVFIAAT----MLTSG------QSALDTI 255
+ V VGH GG + M P KVAKAV IAA + T G +S D
Sbjct: 88 IQGAV-HVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGF 146
Query: 256 SQQMGSN 262
Q+ SN
Sbjct: 147 QAQVASN 153
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
Length = 309
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+ +HG ++ W + + +G++ A DL G G S + L+ +V +
Sbjct: 33 LFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXG-DSAKPDIEYRLQDHVAYXDGFID 91
Query: 204 ELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244
LG ++ V+++ HD+G L P +VA F A +
Sbjct: 92 ALGLDDXVLVI-HDWGSVIGXRHARLNPDRVAAVAFXEALV 131
>pdb|1BRO|A Chain A, Bromoperoxidase A2
pdb|1BRO|B Chain B, Bromoperoxidase A2
Length = 277
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
VL+HG W + L ++G++V D G G SS T + + L +T
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY-DYDTFAADL-NTVL 84
Query: 204 ELGNEEKVILVGHDFG-GACISYVMELFPSKVAKAVFIAA 242
E + + +LVG G G YV +++AK F+A+
Sbjct: 85 ETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLAS 124
>pdb|1A7U|A Chain A, Chloroperoxidase T
pdb|1A7U|B Chain B, Chloroperoxidase T
pdb|1A8U|A Chain A, Chloroperoxidase TBENZOATE COMPLEX
pdb|1A8U|B Chain B, Chloroperoxidase TBENZOATE COMPLEX
Length = 277
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
VL+HG W + L ++G++V D G G SS T + + L +T
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY-DYDTFAADL-NTVL 84
Query: 204 ELGNEEKVILVGHDFG-GACISYVMELFPSKVAKAVFIAA 242
E + + +LVG G G YV +++AK F+A+
Sbjct: 85 ETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAKVAFLAS 124
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
V HG A W M G++V A D G G S + ++ Y +
Sbjct: 25 VFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTG-HDMDTYAAD-VAALT 82
Query: 204 ELGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAA 242
E + + +GH GG ++ YV P +VAKAV ++A
Sbjct: 83 EALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSA 122
>pdb|2PSD|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSE|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 318
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+ +HG ++ W + + E + DL G G S N L + K L F
Sbjct: 47 IFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFE 105
Query: 204 ELGNEEKVILVGHDFGGAC 222
L +K+I VGHD+G A
Sbjct: 106 LLNLPKKIIFVGHDWGAAL 124
>pdb|4ETW|A Chain A, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|C Chain C, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 264
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 93/264 (35%), Gaps = 39/264 (14%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
H VL+HG G A W + + S F + VDL G G S SL + ++
Sbjct: 15 HLVLLHGWGLNAEVW-RCIDEELSSHFTLHLVDLPGFGRSR--GFGALSLADMAEAVLQQ 71
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTIS----- 256
+K I +G GG S + P +V V +A++ S + I
Sbjct: 72 -----APDKAIWLGWALGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLA 126
Query: 257 --QQMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPI 314
QQ S+D + + FL Q T + A K LAL P+
Sbjct: 127 GFQQQLSDDFQRTVERFL---ALQTMGTETARQ---------DARALKKTVLAL----PM 170
Query: 315 PFAPV----LEKLSVSDDNYG----SVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEI 366
P V LE L D S+P + D +P V + P +
Sbjct: 171 PEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIF 230
Query: 367 KGSDHAPFFSKPRALHRILVEISK 390
+ HAPF S P +LV + +
Sbjct: 231 AKAAHAPFISHPAEFCHLLVALKQ 254
>pdb|2PSH|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSH|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+ +HG ++ W + + E + DL G G S N L + K L F
Sbjct: 48 IFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFE 106
Query: 204 ELGNEEKVILVGHDFGGAC 222
L +K+I VGHD+G A
Sbjct: 107 LLNLPKKIIFVGHDWGAAL 125
>pdb|2PSJ|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSJ|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 319
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+ +HG ++ W + + E + DL G G S N L + K L F
Sbjct: 48 IFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFE 106
Query: 204 ELGNEEKVILVGHDFGGAC 222
L +K+I VGHD+G A
Sbjct: 107 LLNLPKKIIFVGHDWGAAL 125
>pdb|2PSF|A Chain A, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
pdb|2PSF|B Chain B, Crystal Structures Of The Luciferase And Green Fluorescent
Protein From Renilla Reniformis
Length = 310
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
+ +HG ++ W + + E + DL G G S N L + K L F
Sbjct: 47 IFLHGNATSSYLWRHVVPHI-EPVARCIIPDLIGMGKSGKSGNGSYRLLDHYKYLTAWFE 105
Query: 204 ELGNEEKVILVGHDFGGAC 222
L +K+I VGHD+G A
Sbjct: 106 LLNLPKKIIFVGHDWGAAL 124
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
V HG A W M L G++V A D G G SS S ++ Y L
Sbjct: 23 VFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSS-QPWSGNDMDTYADDLAQLIE 81
Query: 204 ELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAA 242
L + V+ GG Y+ ++VAKA I+A
Sbjct: 82 HLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISA 120
>pdb|1BRT|A Chain A, Bromoperoxidase A2 Mutant M99t
Length = 277
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
VL+HG W + L ++G++V D G G SS T + + L +T
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY-DYDTFAADL-NTVL 84
Query: 204 ELGNEEKVILVGHDFG-GACISYVMELFPSKVAKAVFIAA 242
E + + +LVG G G YV +++AK F+A+
Sbjct: 85 ETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLAS 124
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 122 IKRPHQLVNQEPKIESPETS-HFV---------LVHGGGFGAWCWYKTMTLLKESGFKVD 171
I+RP + E ++ P+ H+V L+HG W W K + L E + V
Sbjct: 3 IRRPEDFKHYE--VQLPDVKIHYVREGAGPTLLLLHGWPGFWWEWSKVIGPLAEH-YDVI 59
Query: 172 AVDLTGSGVSSC-DTNSIT--SLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVME 228
DL G G S D N ++ SL++ + LG E K +VGHDF + +
Sbjct: 60 VPDLRGFGDSEKPDLNDLSKYSLDKAADDQAALLDALGIE-KAYVVGHDFAAIVLHKFIR 118
Query: 229 LFPSKVAKA 237
+ +V KA
Sbjct: 119 KYSDRVIKA 127
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 122 IKRPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWY---KTMTLLKESGFKVDAVDLTGS 178
+ P +L E + + +T VL+HGGG GA W + + +L F V AVD G
Sbjct: 40 VDGPLKLHYHEAGVGNDQT--VVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGY 96
Query: 179 GVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAV 238
G S L F++LG +V LVG+ GG +P++ + V
Sbjct: 97 GHSDKRAEHGQFNRYAAMALKGLFDQLG-LGRVPLVGNSLGGGTAVRFALDYPARAGRLV 155
Query: 239 FIA 241
+
Sbjct: 156 LMG 158
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 144 VLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLID 200
+L+HG G G W T+ L + ++V A D+ G G + N S + +V +I
Sbjct: 29 ILIHGSGPGVSAYANWRLTIPALSKF-YRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIG 87
Query: 201 TFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAAT 243
+ L EK +VG+ FGG + +V + V + A
Sbjct: 88 IMDAL-EIEKAHIVGNSFGGGLAIATALRYSERVDRMVLMGAV 129
>pdb|3VDX|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|3VDX|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|A Chain A, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|B Chain B, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|C Chain C, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|D Chain D, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|E Chain E, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|F Chain F, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|G Chain G, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|H Chain H, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|I Chain I, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|J Chain J, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|K Chain K, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
pdb|4D9J|L Chain L, Structure Of A 16 Nm Protein Cage Designed By Fusing
Symmetric Oligomeric Domains
Length = 456
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
VL+HG W + L ++G++V D G G SS T + + L +T
Sbjct: 28 VLIHGFPLSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTTGY-DYDTFAADL-NTVL 85
Query: 204 ELGNEEKVILVGHDFG-GACISYVMELFPSKVAKAVFIAA 242
E + + +LVG G G YV +++A F+A+
Sbjct: 86 ETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLAS 125
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Query: 122 IKRPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWY---KTMTLLKESGFKVDAVDLTGS 178
+ P +L E + + +T VL+HGGG GA W + + +L F V AVD G
Sbjct: 20 VDGPLKLHYHEAGVGNDQT--VVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGY 76
Query: 179 GVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAV 238
G S L F++LG +V LVG+ GG +P++ + V
Sbjct: 77 GHSDKRAEHGQFNRYAAMALKGLFDQLG-LGRVPLVGNALGGGTAVRFALDYPARAGRLV 135
Query: 239 FIA 241
+
Sbjct: 136 LMG 138
>pdb|1HKH|A Chain A, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HKH|B Chain B, Unligated Gamma Lactamase From An Aureobacterium Species
pdb|1HL7|A Chain A, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
pdb|1HL7|B Chain B, Gamma Lactamase From An Aureobacterium Species In Complex
With 3a,4,7,7a-Tetrahydro-Benzo [1,3] Dioxol-2-One
Length = 279
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203
VL+HG W + L G++V D G G SS N+ + + L
Sbjct: 27 VLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSS-KVNTGYDYDTFAADLHTVLE 85
Query: 204 ELGNEEKVILVGHDFG-GACISYVMELFPSKVAKAVFIAA 242
L + V+LVG G G YV +VAK F+A+
Sbjct: 86 TL-DLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLAS 124
>pdb|1M33|A Chain A, Crystal Structure Of Bioh At 1.7 A
Length = 258
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 91/264 (34%), Gaps = 39/264 (14%)
Query: 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
H VL+HG G A W + + S F + VDL G G S SL + ++
Sbjct: 15 HLVLLHGWGLNAEVW-RCIDEELSSHFTLHLVDLPGFGRSR--GFGALSLADXAEAVLQQ 71
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTIS----- 256
+K I +G GG S + P +V V +A++ S + I
Sbjct: 72 -----APDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDVLA 126
Query: 257 --QQMGSNDLMQQAQIFLYANGKQNPPTSIXXXXXXXXXXXFNRSAAKDVELALISMRPI 314
QQ S+D + + FL Q T + A K LAL P
Sbjct: 127 GFQQQLSDDQQRTVERFL---ALQTXGTETARQ---------DARALKKTVLAL----PX 170
Query: 315 PFAPV----LEKLSVSDDNYG----SVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEI 366
P V LE L D S P + D +P V + P +
Sbjct: 171 PEVDVLNGGLEILKTVDLRQPLQNVSXPFLRLYGYLDGLVPRKVVPXLDKLWPHSESYIF 230
Query: 367 KGSDHAPFFSKPRALHRILVEISK 390
+ HAPF S P +LV + +
Sbjct: 231 AKAAHAPFISHPAEFCHLLVALKQ 254
>pdb|1B6G|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Chloride
Length = 310
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV D+GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTD 154
>pdb|1BEE|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr
pdb|1BEZ|A Chain A, Haloalkane Dehalogenase Mutant With Trp 175 Replaced By
Tyr At Ph 5
Length = 310
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV D+GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTD 154
>pdb|1EDB|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDD|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|1EDE|A Chain A, Refined X-Ray Structures Of Haloalkane Dehalogenase At Ph
6.2 And Ph 8.2 And Implications For The Reaction
Mechanism
pdb|2DHC|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2DHE|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
pdb|2EDA|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2EDC|A Chain A, Crystallographic And Fluorescence Studies Of The
Interaction Of Haloalkane Dehalogenase With Halide Ions:
Studies With Halide Compounds Reveal A Halide Binding
Site In The Active Site
pdb|2HAD|A Chain A, Crystal Structure Of Haloalkane Dehalogenase: An Enzyme To
Detoxify Halogenated Alkanes
pdb|2PKY|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
pdb|2YXP|X Chain X, The Effect Of Deuteration On Protein Structure A High
Resolution Comparison Of Hydrogenous And Perdeuterated
Haloalkane Dehalogenase
Length = 310
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV D+GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTD 154
>pdb|3E3A|A Chain A, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3E3A|B Chain B, The Structure Of Rv0554 From Mycobacterium Tuberculosis
pdb|3HSS|A Chain A, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HSS|B Chain B, A Higher Resolution Structure Of Rv0554 From Mycobacterium
Tuberculosis Complexed With Malonic Acid
pdb|3HYS|A Chain A, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HYS|B Chain B, Structure Of Rv0554 From Mycobacterium Tuberculosis
Complexed With Malonic Acid
pdb|3HZO|A Chain A, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
pdb|3HZO|B Chain B, Rv0554 From Mycobacterium Tuberculosis - The Structure
Solved From The Tetragonal Crystal Form
Length = 293
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 28/257 (10%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVS-SCDTNSITSLEQYVKPLIDT 201
F+ GG W ++ L +G++ D G G + + + + ++ LI+T
Sbjct: 48 FIAGRGGAGRTWHPHQVPAFLA-AGYRCITFDNRGIGATENAEGFTTQTMVADTAALIET 106
Query: 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGS 261
+ +VG G +M + P V+ AV +A T G+ LD Q
Sbjct: 107 LDI----APARVVGVSMGAFIAQELMVVAPELVSSAVLMA----TRGR--LDRARQ---- 152
Query: 262 NDLMQQAQIFLYANGKQNPPT--SIXXXXXXXXXXXFNRSAAKDVELALISMRPIPFAPV 319
+A+ LY +G Q PPT + N A +A+ SM PI P
Sbjct: 153 --FFNKAEAELYDSGVQLPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPG 210
Query: 320 LE-KLSVSDDN-----YGSV--PRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDH 371
L +L + Y ++ P I D P + + ++ P +I + H
Sbjct: 211 LRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGH 270
Query: 372 APFFSKPRALHRILVEI 388
FF +P A++ +++
Sbjct: 271 LGFFERPEAVNTAMLKF 287
>pdb|1CIJ|A Chain A, Haloalkane Dehalogenase Soaked With High Concentration Of
Bromide
pdb|1BE0|A Chain A, Haloalkane Dehalogenase At Ph 5.0 Containing Acetic Acid
Length = 310
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV D+GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTD 154
>pdb|1HDE|A Chain A, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
pdb|1HDE|B Chain B, Haloalkane Dehalogenase Mutant With Phe 172 Replaced With
Trp
Length = 310
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV D+GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMTD 154
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 138 PETSHFVLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQY 194
P++ VL+HG G GA W + L E+ F V A DL G G S + +
Sbjct: 27 PQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVV-APDLIGFGQSEYPETYPGHIMSW 85
Query: 195 VKPLIDTFNELGNE---EKVILVGHDFGGACISYVMELFPSKVAKAVFIAAT 243
V ++ L N EK +VG+ GGA ++ P + K + +
Sbjct: 86 VGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSV 137
>pdb|1R3D|A Chain A, Crystal Structure Of Protein Vc1974 From Vibrio Cholerae,
Pfam Abhydrolase
Length = 264
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 144 VLVHGG-GFGAWCWYKTMTLLKESGFKVDAVDLTGSGVS---SCD--TNSITSLEQYVKP 197
VLVHG G GA W ++ L + +DL G G + CD ++ +EQ V+
Sbjct: 20 VLVHGLLGSGA-DWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAEAVEXIEQTVQA 78
Query: 198 LIDTFNELGNEEKVILVGHDFGGACISY 225
+ + E VILVG+ GG I +
Sbjct: 79 HVTS------EVPVILVGYSLGGRLIXH 100
>pdb|1QGE|D Chain D, New Crystal Form Of Pseudomonas Glumae (Formerly
Chromobacterium Viscosum Atcc 6918) Lipase
Length = 222
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
WY + L+ G KV +L+G L YVK ++ KV L+G
Sbjct: 30 WYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGA----TKVNLIG 85
Query: 216 HDFGGACISYVMELFPSKVAKAVFIA 241
H GG YV + P VA I
Sbjct: 86 HSQGGLTSRYVAAVAPQLVASVTTIG 111
>pdb|1TAH|B Chain B, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|A Chain A, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|C Chain C, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
pdb|1TAH|D Chain D, The Crystal Structure Of Triacylglycerol Lipase From
Pseudomonas Glumae Reveals A Partially Redundant
Catalytic Aspartate
Length = 318
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
WY + L+ G KV +L+G L YVK ++ KV L+G
Sbjct: 29 WYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGA----TKVNLIG 84
Query: 216 HDFGGACISYVMELFPSKVAKAVFIA 241
H GG YV + P VA I
Sbjct: 85 HSQGGLTSRYVAAVAPQLVASVTTIG 110
>pdb|2ES4|A Chain A, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|2ES4|B Chain B, Crystal Structure Of The Burkholderia Glumae Lipase-
Specific Foldase In Complex With Its Cognate Lipase
pdb|1CVL|A Chain A, Crystal Structure Of Bacterial Lipase From Chromobacterium
Viscosum Atcc 6918
Length = 319
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
WY + L+ G KV +L+G L YVK ++ KV L+G
Sbjct: 30 WYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQVLAATGA----TKVNLIG 85
Query: 216 HDFGGACISYVMELFPSKVAKAVFIA 241
H GG YV + P VA I
Sbjct: 86 HSQGGLTSRYVAAVAPQLVASVTTIG 111
>pdb|3BF7|A Chain A, 1.1 Resolution Structure Of Ybff, A New Esterase From
Escherichia Coli: A Unique Substrate-Binding Crevice
Generated By Domain Arrangement
pdb|3BF7|B Chain B, 1.1 Resolution Structure Of Ybff, A New Esterase From
Escherichia Coli: A Unique Substrate-Binding Crevice
Generated By Domain Arrangement
Length = 255
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
VLVHG FG+ + + + VD+ G+S + + + + L+DT
Sbjct: 19 IVLVHGL-FGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPRE--PVMNYPAMAQDLVDTL 75
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFI 240
+ L +K +GH GG + + L P ++ K V I
Sbjct: 76 DAL-QIDKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112
>pdb|4DGQ|A Chain A, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|B Chain B, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
pdb|4DGQ|C Chain C, Crystal Structure Of Non-Heme Chloroperoxidase From
Burkholderia Cenocepacia
Length = 280
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
W + GF+V A D G G SS + ++ Y +LG + VG
Sbjct: 42 WDAQLLFFVNKGFRVVAHDRRGHGRSSQVWDG-HDMDHYADDAAAVVEKLGT-HGAMHVG 99
Query: 216 HDFGGA-CISYVMELFPSKVAKAVFIAA 242
H GG + Y+ V+KAV I++
Sbjct: 100 HSTGGGEVVRYIARHGERNVSKAVLISS 127
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS--CDTNSITSLEQYVKPLIDTFNE 204
HG A W M L G++ A D G G S N + + LI+
Sbjct: 26 HGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83
Query: 205 LGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAATMLTSGQ 249
+ ++V LVG GG ++ Y+ ++VA V + A GQ
Sbjct: 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPIFGQ 127
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS--CDTNSITSLEQYVKPLIDTFNE 204
HG A W M L G++ A D G G S N + + LI+
Sbjct: 26 HGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83
Query: 205 LGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAATMLTSGQ 249
+ ++V LVG GG ++ Y+ ++VA V + A GQ
Sbjct: 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
>pdb|3JWE|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
pdb|3JWE|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase In
Complex With Sar629
Length = 320
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG 206
HG G + + + +L V A D G G S + ++ +V+ ++ + +
Sbjct: 66 HGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ 125
Query: 207 NEEK---VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA 251
+ V L+GH GGA P A V I+ +L + +SA
Sbjct: 126 KDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA 173
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 143 FVLVHGGGFGAWCWYK-TMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
+L+HGGG A W T ++ ++ A+DL G + S E K + +
Sbjct: 41 LLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNV 100
Query: 202 FNELGNE--EKVILVGHDFGGA 221
+ + ++L+GH GGA
Sbjct: 101 VEAMYGDLPPPIMLIGHSMGGA 122
>pdb|3PE6|A Chain A, Crystal Structure Of A Soluble Form Of Human Mgll In
Complex With An Inhibitor
Length = 303
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG 206
HG G + + + +L V A D G G S + ++ +V+ ++ + +
Sbjct: 49 HGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ 108
Query: 207 NEEK---VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA 251
+ V L+GH GGA P A V I+ +L + +SA
Sbjct: 109 KDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA 156
>pdb|3HJU|A Chain A, Crystal Structure Of Human Monoglyceride Lipase
pdb|3HJU|B Chain B, Crystal Structure Of Human Monoglyceride Lipase
Length = 342
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG 206
HG G + + + +L V A D G G S + ++ +V+ ++ + +
Sbjct: 67 HGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVSDFHVFVRDVLQHVDSMQ 126
Query: 207 NEEK---VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA 251
+ V L+GH GGA P A V I+ +L + +SA
Sbjct: 127 KDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA 174
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS--CDTNSITSLEQYVKPLIDTFNE 204
HG A W M L G++ A D G G S N + + LI+
Sbjct: 26 HGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83
Query: 205 LGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAATMLTSGQ 249
+ ++V LVG GG ++ Y+ ++VA V + A GQ
Sbjct: 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
>pdb|1YS1|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (R)-2-Methyl-3-Phenylpropyl Ester
pdb|1YS2|X Chain X, Burkholderia Cepacia Lipase Complexed With Hexylphosphonic
Acid (s) 2-methyl-3-phenylpropyl Ester
Length = 320
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
WY L++ G V +L+G L YVK ++ KV LVG
Sbjct: 30 WYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGA----TKVNLVG 85
Query: 216 HDFGGACISYVMELFPSKVAKAVFIA 241
H GG YV + P VA I
Sbjct: 86 HSQGGLTSRYVAAVAPDLVASVTTIG 111
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS--CDTNSITSLEQYVKPLIDTFNE 204
HG A W M L G++ A D G G S N + + LI+
Sbjct: 26 HGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83
Query: 205 LGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAATMLTSGQ 249
+ ++V LVG GG ++ Y+ ++VA V + A GQ
Sbjct: 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
>pdb|1OIL|A Chain A, Structure Of Lipase
pdb|1OIL|B Chain B, Structure Of Lipase
pdb|4LIP|D Chain D, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|4LIP|E Chain E, Pseudomonas Lipase Complexed With Rc-(rp, Sp)-
Dibutylcarbamoylglycero-3-o-butylphosphonate
pdb|1HQD|A Chain A, Pseudomonas Cepacia Lipase Complexed With Transition State
Analogue Of 1-Phenoxy-2-Acetoxy Butane
pdb|2LIP|A Chain A, Pseudomonas Lipase Open Conformation
pdb|3LIP|A Chain A, Open Conformation Of Pseudomonas Cepacia Lipase
pdb|5LIP|A Chain A, Pseudomonas Lipase Complexed With Rc-(Rp, Sp)-1,2-
Dioctylcarbamoylglycero-3-O-Octylphosphonate
pdb|2NW6|A Chain A, Burkholderia Cepacia Lipase Complexed With S-Inhibitor
Length = 320
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215
WY L++ G V +L+G L YVK ++ KV LVG
Sbjct: 30 WYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQLLAYVKTVLAATGA----TKVNLVG 85
Query: 216 HDFGGACISYVMELFPSKVAKAVFIA 241
H GG YV + P VA I
Sbjct: 86 HSQGGLTSRYVAAVAPDLVASVTTIG 111
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS--CDTNSITSLEQYVKPLIDTFNE 204
HG A W M L G++ A D G G S N + + LI+
Sbjct: 26 HGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWTGNDYDTFADDIAQLIEHL-- 83
Query: 205 LGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAATMLTSGQ 249
+ ++V LVG GG ++ Y+ ++VA V + A GQ
Sbjct: 84 --DLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQ 127
>pdb|3C5W|P Chain P, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 143 FVLVHGGGFGAWCWYK-TMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201
+L+HGGG A W T ++ ++ A+DL G + S E K + +
Sbjct: 45 LLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNV 104
Query: 202 FNELGNE--EKVILVGHDFGGA 221
+ + ++L+GH GGA
Sbjct: 105 VEAMYGDLPPPIMLIGHAMGGA 126
>pdb|2DHD|A Chain A, Crystallographic Analysis Of The Catalytic Mechanism Of
Haloalkane Dehalogenase
Length = 310
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 45/105 (42%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
F+ +HG ++ + K + + ESG +V A D G G S + ++ + +
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247
E + + LV +GG + PS+ + + + A ++T
Sbjct: 110 IERLDLRNITLVVQXWGGFLGLTLPMADPSRFKRLIIMNACLMTD 154
>pdb|3FOB|A Chain A, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|B Chain B, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
pdb|3FOB|C Chain C, Crystal Structure Of Bromoperoxidase From Bacillus
Anthracis
Length = 281
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 144 VLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS-----CDTNSITSLEQYVKPL 198
VL+HG W + L E+G++V D G G SS + ++ TS +
Sbjct: 31 VLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTFTSDLHQLLEQ 90
Query: 199 IDTFNELGNEEKVILVGHDFGGACIS-YVMELFPSKVAKAVFIAA 242
++ N V LVG GG ++ Y+ ++ K VF A
Sbjct: 91 LELQN-------VTLVGFSXGGGEVARYISTYGTDRIEKVVFAGA 128
>pdb|3BF8|A Chain A, 1.1 Resolution Structure Of Ybff, A New Esterase From
Escherichia Coli: A Unique Substrate-Binding Crevice
Generated By Domain Arrangement
pdb|3BF8|B Chain B, 1.1 Resolution Structure Of Ybff, A New Esterase From
Escherichia Coli: A Unique Substrate-Binding Crevice
Generated By Domain Arrangement
Length = 255
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTF 202
VLVHG FG+ + + + VD+ G+S + + + + L+DT
Sbjct: 19 IVLVHGL-FGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPRE--PVMNYPAMAQDLVDTL 75
Query: 203 NELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFI 240
+ +K +GH GG + + L P ++ K V I
Sbjct: 76 DA-QQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112
>pdb|3PF8|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
pdb|3PF8|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536
Length = 270
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 209 EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS 250
+ LVGH GG S + L+P + K V +A G +
Sbjct: 119 RNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA 160
>pdb|3JW8|A Chain A, Crystal Structure Of Human Mono-Glyceride Lipase
pdb|3JW8|B Chain B, Crystal Structure Of Human Mono-Glyceride Lipase
Length = 320
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Query: 147 HGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG 206
HG G + + + L V A D G G S + ++ +V+ D +
Sbjct: 66 HGAGEHSGRYEELARXLXGLDLLVFAHDHVGHGQSEGERXVVSDFHVFVR---DVLQHVD 122
Query: 207 NEEK------VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA 251
+ +K V L+GH GGA P A V I+ +L + +SA
Sbjct: 123 SXQKDYPGLPVFLLGHSXGGAIAILTAAERPGHFAGXVLISPLVLANPESA 173
>pdb|3BE4|A Chain A, Crystal Structure Of Cryptosporidium Parvum Adenylate
Kinase Cgd5_3360
Length = 217
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 148 GGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN 207
G G G C + + KE G A TG + N T + K +I++ N +G+
Sbjct: 15 GSGKGTQCEF----IKKEYGL---AHLSTGDMLREAIKNG-TKIGLEAKSIIESGNFVGD 66
Query: 208 EEKVILVGHDFG-GACIS-YVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLM 265
E + LV F G C++ +V++ FP + +A +A + G S I ++ ++++
Sbjct: 67 EIVLGLVKEKFDLGVCVNGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEII 126
Query: 266 QQ 267
++
Sbjct: 127 ER 128
>pdb|3PF9|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant
pdb|3PFB|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFB|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate
pdb|3PFC|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Ferulic
Acid
pdb|3S2Z|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
pdb|3S2Z|B Chain B, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With Caffeic
Acid
Length = 270
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 209 EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS 250
+ LVGH GG S + L+P + K V +A G +
Sbjct: 119 RNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA 160
>pdb|3QM1|A Chain A, Crystal Structure Of The Lactobacillus Johnsonii Cinnamoyl
Esterase Lj0536 S106a Mutant In Complex With
Ethylferulate, Form Ii
Length = 265
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS 250
+ LVGH GG S + L+P + K V +A G +
Sbjct: 120 NIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDA 160
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,163,735
Number of Sequences: 62578
Number of extensions: 368225
Number of successful extensions: 896
Number of sequences better than 100.0: 104
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 810
Number of HSP's gapped (non-prelim): 108
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)