Query 016141
Match_columns 394
No_of_seqs 475 out of 2424
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 04:10:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016141.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016141hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 3.9E-33 8.4E-38 253.6 24.3 248 142-392 5-253 (255)
2 PLN02824 hydrolase, alpha/beta 100.0 6.3E-32 1.4E-36 250.8 25.6 243 139-392 28-294 (294)
3 PRK00870 haloalkane dehalogena 100.0 1.1E-31 2.4E-36 250.2 22.1 247 137-393 43-302 (302)
4 PLN02211 methyl indole-3-aceta 100.0 2E-30 4.4E-35 237.5 26.1 252 137-391 15-269 (273)
5 TIGR02240 PHA_depoly_arom poly 100.0 9.7E-31 2.1E-35 240.6 22.7 237 139-392 24-266 (276)
6 PLN02679 hydrolase, alpha/beta 100.0 2.6E-30 5.5E-35 246.2 25.6 240 139-392 87-357 (360)
7 PRK03592 haloalkane dehalogena 100.0 3E-30 6.5E-35 239.7 23.8 250 138-392 25-289 (295)
8 KOG4178 Soluble epoxide hydrol 100.0 4.3E-30 9.4E-35 229.5 22.9 247 136-393 40-321 (322)
9 PRK03204 haloalkane dehalogena 100.0 6.8E-30 1.5E-34 236.0 22.9 249 138-390 32-286 (286)
10 PRK10349 carboxylesterase BioH 100.0 1.8E-29 3.9E-34 229.6 24.0 233 139-390 11-254 (256)
11 TIGR03343 biphenyl_bphD 2-hydr 100.0 2.3E-29 5.1E-34 232.0 23.6 244 138-390 28-281 (282)
12 PRK10673 acyl-CoA esterase; Pr 100.0 2.2E-29 4.9E-34 228.6 22.0 237 138-392 14-255 (255)
13 TIGR03611 RutD pyrimidine util 100.0 4.4E-29 9.5E-34 225.9 23.8 241 138-390 11-256 (257)
14 TIGR03056 bchO_mg_che_rel puta 100.0 6.6E-29 1.4E-33 228.1 22.9 238 139-390 27-278 (278)
15 PLN03087 BODYGUARD 1 domain co 100.0 4E-28 8.7E-33 235.0 26.5 246 140-392 201-479 (481)
16 PLN02385 hydrolase; alpha/beta 100.0 4.8E-29 1E-33 236.9 19.8 243 138-393 85-346 (349)
17 TIGR02427 protocat_pcaD 3-oxoa 100.0 2.4E-28 5.3E-33 219.6 23.3 237 139-390 12-251 (251)
18 PLN03084 alpha/beta hydrolase 100.0 3.7E-28 8.1E-33 230.8 25.5 247 138-391 125-383 (383)
19 PHA02857 monoglyceride lipase; 100.0 4.2E-28 9.1E-33 223.1 24.5 253 124-394 9-275 (276)
20 PRK06489 hypothetical protein; 100.0 2.7E-28 5.8E-33 232.6 23.9 244 140-394 69-359 (360)
21 PLN02578 hydrolase 100.0 4.4E-28 9.6E-33 230.5 25.0 238 138-390 84-353 (354)
22 TIGR01738 bioH putative pimelo 100.0 5.7E-28 1.2E-32 216.5 23.0 232 140-389 4-245 (245)
23 PRK11126 2-succinyl-6-hydroxy- 100.0 3.8E-28 8.3E-33 218.8 21.9 229 140-391 2-241 (242)
24 KOG4409 Predicted hydrolase/ac 100.0 3.7E-27 7.9E-32 211.2 23.8 249 135-391 85-363 (365)
25 PF12697 Abhydrolase_6: Alpha/ 100.0 1.3E-28 2.8E-33 217.7 13.6 220 143-384 1-228 (228)
26 TIGR01250 pro_imino_pep_2 prol 100.0 8.1E-27 1.8E-31 214.4 25.2 248 139-390 24-288 (288)
27 KOG1454 Predicted hydrolase/ac 100.0 3.3E-28 7.1E-33 226.3 15.9 247 138-393 56-325 (326)
28 PLN02652 hydrolase; alpha/beta 100.0 9.6E-28 2.1E-32 229.4 18.5 241 138-393 134-388 (395)
29 PRK10749 lysophospholipase L2; 100.0 7.7E-27 1.7E-31 219.9 21.9 244 138-392 52-329 (330)
30 PLN02298 hydrolase, alpha/beta 100.0 3.9E-27 8.5E-32 222.3 19.6 240 139-392 58-317 (330)
31 TIGR03695 menH_SHCHC 2-succiny 100.0 1.6E-26 3.5E-31 207.3 22.4 242 140-390 1-251 (251)
32 PRK07581 hypothetical protein; 100.0 7.1E-27 1.5E-31 221.3 20.4 251 140-392 41-336 (339)
33 PLN02894 hydrolase, alpha/beta 99.9 1.4E-25 3.1E-30 216.0 28.0 245 138-391 103-384 (402)
34 PRK08775 homoserine O-acetyltr 99.9 7.2E-27 1.6E-31 221.4 18.0 240 140-392 57-339 (343)
35 TIGR01392 homoserO_Ac_trn homo 99.9 5.4E-26 1.2E-30 216.1 19.0 249 139-390 30-351 (351)
36 PRK00175 metX homoserine O-ace 99.9 1.2E-25 2.7E-30 215.4 20.9 246 139-393 47-375 (379)
37 PRK14875 acetoin dehydrogenase 99.9 2.6E-25 5.7E-30 213.2 22.7 233 138-392 129-371 (371)
38 COG2267 PldB Lysophospholipase 99.9 3.4E-25 7.3E-30 204.1 22.0 261 126-393 20-295 (298)
39 KOG1455 Lysophospholipase [Lip 99.9 1.3E-24 2.9E-29 191.4 17.3 254 125-392 37-312 (313)
40 PLN02980 2-oxoglutarate decarb 99.9 2.8E-24 6.2E-29 236.5 23.9 241 139-392 1370-1639(1655)
41 TIGR01249 pro_imino_pep_1 prol 99.9 8E-24 1.7E-28 197.5 21.3 106 138-245 25-131 (306)
42 PLN02511 hydrolase 99.9 2.8E-24 6E-29 206.2 15.8 237 138-392 98-365 (388)
43 PRK05855 short chain dehydroge 99.9 7.3E-24 1.6E-28 215.1 19.1 246 137-391 22-291 (582)
44 COG1647 Esterase/lipase [Gener 99.9 1.6E-23 3.5E-28 175.8 17.2 224 138-391 13-243 (243)
45 TIGR01607 PST-A Plasmodium sub 99.9 1.1E-22 2.3E-27 191.5 19.4 239 138-390 19-331 (332)
46 KOG2382 Predicted alpha/beta h 99.9 3.1E-22 6.7E-27 179.4 19.5 241 137-392 49-313 (315)
47 PRK06765 homoserine O-acetyltr 99.9 8.3E-22 1.8E-26 187.8 20.5 253 138-392 54-388 (389)
48 PRK05077 frsA fermentation/res 99.9 3.9E-21 8.4E-26 185.4 24.3 217 138-392 192-412 (414)
49 TIGR03100 hydr1_PEP hydrolase, 99.9 1.2E-21 2.5E-26 179.7 18.9 232 139-391 25-274 (274)
50 PRK10985 putative hydrolase; P 99.9 2.6E-21 5.7E-26 181.8 19.9 241 138-391 56-319 (324)
51 KOG2984 Predicted hydrolase [G 99.9 4.3E-22 9.2E-27 164.2 9.7 230 138-392 39-276 (277)
52 PRK11071 esterase YqiA; Provis 99.9 4.7E-20 1E-24 159.3 21.2 184 141-390 2-189 (190)
53 PF00561 Abhydrolase_1: alpha/ 99.9 6.9E-22 1.5E-26 175.9 9.2 209 168-386 1-229 (230)
54 PRK13604 luxD acyl transferase 99.9 3E-20 6.5E-25 168.5 19.9 198 139-374 36-246 (307)
55 PRK10566 esterase; Provisional 99.8 1.2E-19 2.6E-24 164.2 20.6 206 138-392 25-248 (249)
56 KOG2564 Predicted acetyltransf 99.8 3.8E-20 8.2E-25 160.3 13.5 106 137-243 71-181 (343)
57 PLN02872 triacylglycerol lipas 99.8 4.9E-19 1.1E-23 168.8 21.5 248 139-393 73-390 (395)
58 TIGR01838 PHA_synth_I poly(R)- 99.8 4.8E-19 1E-23 173.5 21.5 234 139-379 187-462 (532)
59 TIGR01836 PHA_synth_III_C poly 99.8 1E-18 2.3E-23 166.0 22.5 246 140-391 62-349 (350)
60 COG0596 MhpC Predicted hydrola 99.8 1.5E-18 3.2E-23 155.9 21.9 241 140-390 21-280 (282)
61 PF12695 Abhydrolase_5: Alpha/ 99.8 7.2E-19 1.5E-23 145.3 13.2 144 142-372 1-145 (145)
62 PF06342 DUF1057: Alpha/beta h 99.8 1.7E-17 3.6E-22 145.6 22.0 234 140-390 35-297 (297)
63 PRK07868 acyl-CoA synthetase; 99.8 1.1E-17 2.3E-22 178.8 23.6 251 138-392 65-361 (994)
64 KOG1552 Predicted alpha/beta h 99.7 4E-17 8.8E-22 141.5 15.8 191 138-391 58-251 (258)
65 PRK11460 putative hydrolase; P 99.7 1.2E-16 2.7E-21 142.6 18.6 176 137-390 13-210 (232)
66 TIGR03101 hydr2_PEP hydrolase, 99.7 7.9E-17 1.7E-21 145.4 15.0 104 140-245 25-135 (266)
67 COG0429 Predicted hydrolase of 99.7 4.3E-16 9.4E-21 139.6 17.8 242 137-391 72-339 (345)
68 KOG4667 Predicted esterase [Li 99.7 3.1E-16 6.7E-21 131.1 15.1 221 133-389 26-255 (269)
69 COG3208 GrsT Predicted thioest 99.7 3.6E-16 7.9E-21 134.7 15.6 227 138-391 5-235 (244)
70 PF00326 Peptidase_S9: Prolyl 99.7 4E-16 8.7E-21 137.8 14.0 196 156-394 3-211 (213)
71 KOG4391 Predicted alpha/beta h 99.7 4E-16 8.6E-21 130.5 12.2 201 136-392 74-282 (300)
72 COG1506 DAP2 Dipeptidyl aminop 99.7 9.4E-16 2E-20 155.6 17.4 208 141-394 395-618 (620)
73 TIGR02821 fghA_ester_D S-formy 99.7 7.3E-15 1.6E-19 134.8 21.5 106 139-245 41-174 (275)
74 PLN02442 S-formylglutathione h 99.7 4.2E-15 9E-20 136.8 19.6 107 138-245 45-179 (283)
75 PLN00021 chlorophyllase 99.6 8.2E-15 1.8E-19 135.8 17.9 106 137-244 49-166 (313)
76 COG2021 MET2 Homoserine acetyl 99.6 2.5E-14 5.4E-19 130.5 20.4 252 138-391 49-367 (368)
77 TIGR01840 esterase_phb esteras 99.6 3.5E-14 7.5E-19 125.2 17.8 108 138-245 11-131 (212)
78 KOG2931 Differentiation-relate 99.6 7.4E-13 1.6E-17 116.3 23.3 242 139-390 45-304 (326)
79 COG2945 Predicted hydrolase of 99.6 1.5E-13 3.2E-18 113.6 17.8 174 138-390 26-205 (210)
80 PRK10162 acetyl esterase; Prov 99.6 2.4E-13 5.2E-18 127.3 21.8 220 138-393 79-316 (318)
81 PF02230 Abhydrolase_2: Phosph 99.6 6E-14 1.3E-18 124.1 15.5 179 137-392 11-215 (216)
82 PF01738 DLH: Dienelactone hyd 99.6 5.4E-14 1.2E-18 124.6 15.1 179 138-392 12-217 (218)
83 KOG1838 Alpha/beta hydrolase [ 99.6 4.1E-13 9E-18 124.9 21.2 224 138-377 123-368 (409)
84 PF03096 Ndr: Ndr family; Int 99.6 3.8E-13 8.3E-18 119.9 19.1 238 139-391 22-278 (283)
85 TIGR03230 lipo_lipase lipoprot 99.6 4.6E-14 9.9E-19 134.9 13.7 107 137-245 38-155 (442)
86 PF00975 Thioesterase: Thioest 99.5 2.5E-13 5.5E-18 121.1 16.1 221 141-389 1-229 (229)
87 PF06821 Ser_hydrolase: Serine 99.5 3E-13 6.5E-18 114.2 12.3 155 143-377 1-158 (171)
88 PF06500 DUF1100: Alpha/beta h 99.5 1.5E-12 3.2E-17 122.1 17.6 213 139-391 189-408 (411)
89 cd00707 Pancreat_lipase_like P 99.5 1.3E-13 2.8E-18 126.0 10.4 107 137-245 33-148 (275)
90 TIGR01849 PHB_depoly_PhaZ poly 99.5 7.5E-12 1.6E-16 118.5 20.9 246 141-392 103-406 (406)
91 PF10230 DUF2305: Uncharacteri 99.5 5E-12 1.1E-16 114.9 17.7 108 140-247 2-125 (266)
92 TIGR01839 PHA_synth_II poly(R) 99.5 2.3E-11 5E-16 118.5 23.2 104 139-247 214-331 (560)
93 COG0400 Predicted esterase [Ge 99.4 3.5E-12 7.5E-17 110.3 14.3 169 137-383 15-200 (207)
94 PF05448 AXE1: Acetyl xylan es 99.4 1.2E-11 2.7E-16 114.9 18.9 213 138-392 81-320 (320)
95 PF05728 UPF0227: Uncharacteri 99.4 3.4E-11 7.5E-16 102.8 19.9 182 143-390 2-187 (187)
96 COG0412 Dienelactone hydrolase 99.4 4.1E-11 8.8E-16 106.8 20.5 175 141-392 28-233 (236)
97 TIGR00976 /NonD putative hydro 99.4 1.6E-11 3.5E-16 123.5 18.8 105 138-244 20-132 (550)
98 PF08538 DUF1749: Protein of u 99.4 6.1E-12 1.3E-16 113.4 13.8 238 139-390 32-303 (303)
99 PF12146 Hydrolase_4: Putative 99.4 1.3E-12 2.9E-17 95.1 7.6 72 132-203 8-79 (79)
100 KOG2565 Predicted hydrolases o 99.4 9.6E-12 2.1E-16 112.4 13.9 103 141-244 153-264 (469)
101 COG4757 Predicted alpha/beta h 99.4 2.1E-11 4.5E-16 103.6 13.6 228 141-389 31-280 (281)
102 TIGR03502 lipase_Pla1_cef extr 99.3 1.7E-11 3.8E-16 124.2 13.0 90 140-229 449-575 (792)
103 PF09752 DUF2048: Uncharacteri 99.3 2.1E-10 4.5E-15 105.0 17.6 241 137-390 89-347 (348)
104 PRK10115 protease 2; Provision 99.3 3.2E-10 6.9E-15 116.3 19.2 107 138-245 443-560 (686)
105 KOG2624 Triglyceride lipase-ch 99.3 3.6E-10 7.9E-15 106.9 18.0 267 124-391 57-397 (403)
106 PRK10252 entF enterobactin syn 99.3 1.1E-10 2.4E-15 129.5 16.5 103 138-244 1066-1171(1296)
107 COG3571 Predicted hydrolase of 99.2 6.3E-10 1.4E-14 89.2 15.4 177 142-390 16-209 (213)
108 COG3319 Thioesterase domains o 99.2 1.1E-09 2.4E-14 97.7 16.5 101 141-245 1-104 (257)
109 COG3545 Predicted esterase of 99.2 3.2E-09 7E-14 87.1 17.1 173 140-391 2-178 (181)
110 PF03403 PAF-AH_p_II: Platelet 99.2 1.9E-10 4.1E-15 109.5 10.9 106 138-245 98-263 (379)
111 PF03959 FSH1: Serine hydrolas 99.2 3.4E-10 7.5E-15 99.6 11.7 165 139-378 3-207 (212)
112 PF07859 Abhydrolase_3: alpha/ 99.1 7.2E-10 1.6E-14 97.5 12.6 99 143-246 1-112 (211)
113 PF02129 Peptidase_S15: X-Pro 99.1 1.2E-09 2.6E-14 100.2 14.3 106 138-245 18-137 (272)
114 PRK05371 x-prolyl-dipeptidyl a 99.1 1.1E-09 2.5E-14 113.0 15.6 218 158-392 270-519 (767)
115 COG3243 PhaC Poly(3-hydroxyalk 99.1 8.6E-10 1.9E-14 102.3 12.8 104 139-247 106-220 (445)
116 PF06028 DUF915: Alpha/beta hy 99.1 2.4E-09 5.2E-14 95.8 14.9 204 138-390 9-253 (255)
117 PF10503 Esterase_phd: Esteras 99.1 6.2E-09 1.4E-13 91.1 16.1 107 139-245 15-133 (220)
118 PF07819 PGAP1: PGAP1-like pro 99.1 1.9E-09 4E-14 95.5 12.9 106 139-248 3-127 (225)
119 PF02273 Acyl_transf_2: Acyl t 99.1 1.8E-08 4E-13 86.7 18.2 202 138-378 28-242 (294)
120 COG3458 Acetyl esterase (deace 99.1 1.4E-09 3.1E-14 94.8 11.3 209 138-390 81-315 (321)
121 COG4188 Predicted dienelactone 99.1 1.9E-10 4.2E-15 105.5 5.8 94 138-232 69-182 (365)
122 PF06057 VirJ: Bacterial virul 99.0 4.7E-09 1E-13 88.1 13.2 98 141-245 3-108 (192)
123 PF12740 Chlorophyllase2: Chlo 99.0 8.5E-10 1.8E-14 97.8 9.2 105 138-244 15-131 (259)
124 KOG4627 Kynurenine formamidase 99.0 1.3E-09 2.8E-14 91.1 9.4 199 135-389 62-268 (270)
125 COG0657 Aes Esterase/lipase [L 99.0 3E-08 6.5E-13 92.8 19.6 106 138-247 77-194 (312)
126 KOG2551 Phospholipase/carboxyh 99.0 3.2E-08 7E-13 84.3 17.2 176 139-390 4-222 (230)
127 PTZ00472 serine carboxypeptida 99.0 6.3E-08 1.4E-12 94.9 19.5 107 138-246 75-218 (462)
128 KOG3847 Phospholipase A2 (plat 98.9 1.1E-08 2.5E-13 90.8 11.2 108 138-246 116-277 (399)
129 KOG3975 Uncharacterized conser 98.9 1E-07 2.2E-12 82.3 16.6 243 137-390 26-301 (301)
130 KOG2100 Dipeptidyl aminopeptid 98.9 2.4E-08 5.1E-13 103.1 14.6 199 140-391 526-746 (755)
131 KOG1515 Arylacetamide deacetyl 98.9 3E-07 6.6E-12 85.4 20.5 221 138-391 88-334 (336)
132 PF07224 Chlorophyllase: Chlor 98.9 7.8E-09 1.7E-13 89.9 8.1 107 137-245 43-158 (307)
133 smart00824 PKS_TE Thioesterase 98.9 1.9E-07 4.2E-12 81.4 17.3 97 145-245 2-103 (212)
134 KOG3043 Predicted hydrolase re 98.9 2.3E-08 5E-13 85.1 10.6 173 141-392 40-240 (242)
135 KOG2112 Lysophospholipase [Lip 98.8 5.1E-08 1.1E-12 82.5 11.3 172 140-383 3-199 (206)
136 PLN02733 phosphatidylcholine-s 98.8 2.7E-08 5.8E-13 96.1 10.3 96 151-248 105-205 (440)
137 PRK04940 hypothetical protein; 98.8 1.5E-06 3.3E-11 72.9 18.0 171 143-391 2-179 (180)
138 PF01674 Lipase_2: Lipase (cla 98.7 2E-08 4.3E-13 87.8 6.2 88 141-230 2-96 (219)
139 KOG2281 Dipeptidyl aminopeptid 98.7 1.3E-07 2.9E-12 91.5 11.8 202 139-391 641-866 (867)
140 PF00151 Lipase: Lipase; Inte 98.7 2.5E-08 5.5E-13 93.1 6.2 109 137-246 68-189 (331)
141 PF03583 LIP: Secretory lipase 98.6 4.3E-06 9.3E-11 77.1 18.8 60 330-389 217-282 (290)
142 PF05705 DUF829: Eukaryotic pr 98.6 1.4E-06 3E-11 78.3 15.3 217 142-389 1-240 (240)
143 COG4099 Predicted peptidase [G 98.6 1.8E-07 3.8E-12 82.9 8.4 102 141-244 192-304 (387)
144 PF08840 BAAT_C: BAAT / Acyl-C 98.6 9.7E-08 2.1E-12 84.0 5.6 51 195-246 6-58 (213)
145 PF05990 DUF900: Alpha/beta hy 98.5 9.1E-07 2E-11 78.8 11.4 107 138-245 16-138 (233)
146 PF12715 Abhydrolase_7: Abhydr 98.5 3E-07 6.6E-12 85.4 8.1 106 138-244 113-260 (390)
147 COG4814 Uncharacterized protei 98.5 6.2E-06 1.3E-10 71.7 14.8 104 141-245 46-177 (288)
148 KOG1553 Predicted alpha/beta h 98.4 1.5E-06 3.3E-11 78.4 9.0 102 140-244 243-345 (517)
149 COG1075 LipA Predicted acetylt 98.3 1.4E-06 3E-11 82.1 8.1 103 140-246 59-166 (336)
150 PF11339 DUF3141: Protein of u 98.3 0.0001 2.2E-09 70.7 20.4 80 159-245 93-176 (581)
151 PF00450 Peptidase_S10: Serine 98.3 6E-05 1.3E-09 73.4 19.7 108 137-246 37-183 (415)
152 PLN02606 palmitoyl-protein thi 98.3 2.2E-05 4.7E-10 71.1 14.4 104 139-246 25-134 (306)
153 COG3509 LpqC Poly(3-hydroxybut 98.3 7.1E-06 1.5E-10 73.2 10.6 107 138-244 59-179 (312)
154 KOG4840 Predicted hydrolases o 98.3 4.6E-05 9.9E-10 65.0 14.2 102 140-245 36-145 (299)
155 PF05057 DUF676: Putative seri 98.2 4.3E-06 9.3E-11 73.8 8.4 87 140-228 4-97 (217)
156 PF12048 DUF3530: Protein of u 98.2 0.00024 5.2E-09 66.1 20.3 106 139-245 86-230 (310)
157 PF05577 Peptidase_S28: Serine 98.2 1.5E-05 3.3E-10 78.1 12.1 107 139-245 28-149 (434)
158 PF05677 DUF818: Chlamydia CHL 98.2 1.5E-05 3.2E-10 72.8 10.7 90 138-231 135-237 (365)
159 KOG3253 Predicted alpha/beta h 98.1 5E-05 1.1E-09 73.7 13.5 160 139-376 175-349 (784)
160 PF10340 DUF2424: Protein of u 98.1 0.00026 5.6E-09 66.5 17.8 105 139-246 121-237 (374)
161 COG2936 Predicted acyl esteras 98.1 4.2E-05 9.2E-10 75.0 12.6 122 124-245 28-160 (563)
162 PF00756 Esterase: Putative es 98.1 1.3E-05 2.8E-10 72.4 8.5 109 138-246 22-152 (251)
163 COG1073 Hydrolases of the alph 98.0 4.4E-05 9.5E-10 70.2 10.8 227 138-392 47-297 (299)
164 KOG1551 Uncharacterized conser 98.0 7.5E-05 1.6E-09 65.4 11.2 242 135-392 108-366 (371)
165 PF04301 DUF452: Protein of un 97.9 0.00027 5.8E-09 61.3 13.4 82 139-246 10-92 (213)
166 KOG3101 Esterase D [General fu 97.9 7.8E-05 1.7E-09 63.1 9.6 107 139-246 43-178 (283)
167 PF08386 Abhydrolase_4: TAP-li 97.9 4.3E-05 9.3E-10 58.8 7.3 60 332-391 34-93 (103)
168 PRK10439 enterobactin/ferric e 97.9 0.00011 2.4E-09 71.0 11.5 107 138-244 207-323 (411)
169 COG4782 Uncharacterized protei 97.9 0.0001 2.2E-09 67.9 10.3 106 138-244 114-234 (377)
170 cd00312 Esterase_lipase Estera 97.8 5E-05 1.1E-09 75.8 7.7 108 138-245 93-214 (493)
171 PF02450 LCAT: Lecithin:choles 97.8 0.00011 2.5E-09 70.6 9.7 85 155-249 66-165 (389)
172 PLN02209 serine carboxypeptida 97.8 0.002 4.4E-08 62.7 17.8 60 332-392 351-435 (437)
173 PLN03016 sinapoylglucose-malat 97.7 0.0071 1.5E-07 58.9 20.0 60 332-392 347-431 (433)
174 COG3150 Predicted esterase [Ge 97.6 0.0003 6.5E-09 57.5 7.7 90 143-246 2-93 (191)
175 PLN02633 palmitoyl protein thi 97.6 0.00078 1.7E-08 61.3 10.9 104 138-245 23-132 (314)
176 KOG3724 Negative regulator of 97.6 0.0005 1.1E-08 68.9 10.3 106 138-247 87-223 (973)
177 PF02089 Palm_thioest: Palmito 97.6 0.00012 2.7E-09 65.8 5.6 105 140-245 5-117 (279)
178 PF10142 PhoPQ_related: PhoPQ- 97.5 0.0013 2.7E-08 62.1 12.2 158 197-391 158-319 (367)
179 COG2272 PnbA Carboxylesterase 97.5 0.00022 4.7E-09 68.5 6.9 107 138-245 92-218 (491)
180 KOG2541 Palmitoyl protein thio 97.5 0.0012 2.7E-08 58.2 10.4 101 141-245 24-129 (296)
181 COG1770 PtrB Protease II [Amin 97.5 0.0039 8.4E-08 61.9 14.9 108 138-245 446-563 (682)
182 KOG2183 Prolylcarboxypeptidase 97.4 0.00099 2.1E-08 62.2 9.3 104 141-244 81-202 (492)
183 COG4553 DepA Poly-beta-hydroxy 97.4 0.055 1.2E-06 48.6 19.7 103 140-246 103-211 (415)
184 COG0627 Predicted esterase [Ge 97.4 0.00059 1.3E-08 63.3 7.8 110 138-247 52-190 (316)
185 PLN02213 sinapoylglucose-malat 97.4 0.022 4.7E-07 53.4 18.2 60 332-392 233-317 (319)
186 KOG2182 Hydrolytic enzymes of 97.2 0.002 4.3E-08 61.8 9.6 109 137-245 83-208 (514)
187 KOG3967 Uncharacterized conser 97.2 0.0041 8.8E-08 53.0 10.2 106 139-245 100-228 (297)
188 PF11144 DUF2920: Protein of u 97.2 0.017 3.7E-07 54.6 15.3 36 210-245 185-220 (403)
189 PF00135 COesterase: Carboxyle 97.0 0.0019 4.1E-08 65.0 7.7 107 139-245 124-246 (535)
190 KOG2521 Uncharacterized conser 97.0 0.024 5.2E-07 53.0 13.7 235 142-393 40-291 (350)
191 PLN02517 phosphatidylcholine-s 96.9 0.0028 6E-08 62.6 7.6 92 154-247 156-266 (642)
192 KOG1282 Serine carboxypeptidas 96.9 0.053 1.1E-06 52.8 15.7 60 333-392 364-448 (454)
193 cd00741 Lipase Lipase. Lipase 96.8 0.004 8.7E-08 51.6 6.7 54 192-245 8-68 (153)
194 COG3946 VirJ Type IV secretory 96.7 0.0064 1.4E-07 56.9 7.9 86 140-232 260-349 (456)
195 PF06259 Abhydrolase_8: Alpha/ 96.7 0.025 5.5E-07 47.8 10.8 107 140-246 19-146 (177)
196 KOG2369 Lecithin:cholesterol a 96.5 0.0033 7.2E-08 60.0 4.9 86 154-246 124-227 (473)
197 PF01764 Lipase_3: Lipase (cla 96.4 0.0081 1.8E-07 48.7 6.1 37 192-229 48-84 (140)
198 PF07082 DUF1350: Protein of u 96.4 0.043 9.3E-07 48.5 10.8 94 140-243 17-124 (250)
199 KOG2237 Predicted serine prote 96.2 0.03 6.6E-07 55.5 9.6 107 138-245 468-585 (712)
200 COG1505 Serine proteases of th 96.2 0.088 1.9E-06 52.0 12.4 104 139-243 420-534 (648)
201 COG2819 Predicted hydrolase of 96.0 0.011 2.3E-07 52.8 5.1 50 197-246 123-174 (264)
202 PF11187 DUF2974: Protein of u 95.9 0.021 4.6E-07 50.4 6.6 48 197-246 74-125 (224)
203 KOG1202 Animal-type fatty acid 95.8 0.12 2.6E-06 54.8 12.1 99 136-244 2119-2219(2376)
204 PF11288 DUF3089: Protein of u 95.4 0.038 8.3E-07 47.7 5.8 69 161-230 40-116 (207)
205 cd00519 Lipase_3 Lipase (class 95.4 0.028 6.2E-07 49.9 5.3 21 209-229 128-148 (229)
206 COG2830 Uncharacterized protei 95.3 0.053 1.1E-06 44.2 6.0 80 141-246 12-92 (214)
207 PF01083 Cutinase: Cutinase; 95.2 0.058 1.3E-06 45.9 6.5 103 142-247 7-125 (179)
208 COG2939 Carboxypeptidase C (ca 95.2 0.065 1.4E-06 52.0 7.3 110 138-248 99-240 (498)
209 KOG1516 Carboxylesterase and r 94.9 0.089 1.9E-06 53.3 8.1 106 140-245 112-233 (545)
210 KOG4372 Predicted alpha/beta h 94.7 0.036 7.7E-07 52.2 4.1 89 137-227 77-168 (405)
211 PLN02162 triacylglycerol lipas 94.7 0.09 1.9E-06 50.8 6.8 36 192-228 262-297 (475)
212 PLN00413 triacylglycerol lipas 94.5 0.11 2.4E-06 50.3 7.0 52 192-244 268-327 (479)
213 PLN02454 triacylglycerol lipas 94.4 0.092 2E-06 50.2 6.1 34 196-229 214-248 (414)
214 PLN02571 triacylglycerol lipas 94.0 0.097 2.1E-06 50.1 5.3 38 192-229 208-246 (413)
215 PLN02310 triacylglycerol lipas 93.9 0.17 3.6E-06 48.4 6.7 38 192-229 189-229 (405)
216 PF05576 Peptidase_S37: PS-10 93.5 0.26 5.7E-06 46.7 7.1 106 137-244 60-169 (448)
217 PLN02408 phospholipase A1 93.2 0.15 3.2E-06 48.1 5.1 37 193-229 183-220 (365)
218 PLN02934 triacylglycerol lipas 92.6 0.2 4.4E-06 48.9 5.2 36 192-228 305-340 (515)
219 PLN02324 triacylglycerol lipas 92.5 0.21 4.6E-06 47.8 5.1 37 193-229 198-235 (415)
220 PF05277 DUF726: Protein of un 92.5 0.34 7.5E-06 45.5 6.4 39 209-247 220-263 (345)
221 PF06850 PHB_depo_C: PHB de-po 92.4 0.24 5.2E-06 42.1 4.8 61 332-392 134-202 (202)
222 PLN03037 lipase class 3 family 92.4 0.2 4.4E-06 49.1 4.9 38 192-229 298-338 (525)
223 COG4947 Uncharacterized protei 92.2 0.53 1.1E-05 39.1 6.3 37 209-245 101-137 (227)
224 COG2382 Fes Enterochelin ester 92.1 0.21 4.6E-06 45.4 4.4 107 139-246 97-214 (299)
225 PLN02753 triacylglycerol lipas 92.1 0.23 5E-06 48.8 4.9 37 192-228 291-331 (531)
226 PLN02802 triacylglycerol lipas 92.1 0.25 5.3E-06 48.4 5.1 37 193-229 313-350 (509)
227 COG4287 PqaA PhoPQ-activated p 91.7 0.61 1.3E-05 43.5 6.9 59 332-390 329-388 (507)
228 PLN02761 lipase class 3 family 91.7 0.28 6E-06 48.2 5.0 37 192-228 272-313 (527)
229 PLN02719 triacylglycerol lipas 90.7 0.4 8.8E-06 47.0 5.0 38 192-229 277-318 (518)
230 PF07519 Tannase: Tannase and 90.6 1.2 2.6E-05 44.1 8.4 81 164-245 56-151 (474)
231 PF04083 Abhydro_lipase: Parti 89.9 0.26 5.7E-06 33.9 2.2 19 138-156 41-59 (63)
232 PLN02847 triacylglycerol lipas 88.8 0.78 1.7E-05 45.8 5.4 21 209-229 251-271 (633)
233 TIGR03712 acc_sec_asp2 accesso 88.7 26 0.00056 34.5 16.7 93 133-230 282-378 (511)
234 KOG4569 Predicted lipase [Lipi 88.5 0.75 1.6E-05 43.4 5.0 37 192-229 155-191 (336)
235 PF09949 DUF2183: Uncharacteri 87.5 6.9 0.00015 29.7 8.7 85 154-239 11-97 (100)
236 KOG2029 Uncharacterized conser 87.3 1.4 3.1E-05 43.7 6.0 57 190-246 505-574 (697)
237 KOG1283 Serine carboxypeptidas 87.2 2.3 5.1E-05 39.0 6.9 105 138-245 29-167 (414)
238 PF08237 PE-PPE: PE-PPE domain 86.3 5.5 0.00012 35.2 8.8 80 167-246 2-91 (225)
239 PF06441 EHN: Epoxide hydrolas 85.7 0.69 1.5E-05 35.9 2.5 25 136-160 88-112 (112)
240 KOG4540 Putative lipase essent 80.4 3.1 6.8E-05 37.5 4.7 35 197-231 264-298 (425)
241 COG5153 CVT17 Putative lipase 80.4 3.1 6.8E-05 37.5 4.7 35 197-231 264-298 (425)
242 PRK12467 peptide synthase; Pro 75.9 17 0.00037 46.1 10.9 98 141-242 3693-3793(3956)
243 KOG4388 Hormone-sensitive lipa 73.7 36 0.00078 34.2 10.2 102 139-244 395-508 (880)
244 cd01714 ETF_beta The electron 73.5 17 0.00037 31.4 7.5 72 159-240 68-145 (202)
245 KOG2385 Uncharacterized conser 71.6 7.3 0.00016 38.3 5.0 47 205-252 444-495 (633)
246 PF09994 DUF2235: Uncharacteri 63.0 54 0.0012 30.0 8.9 40 190-229 72-112 (277)
247 PF06309 Torsin: Torsin; Inte 62.6 35 0.00075 27.1 6.4 62 137-204 49-115 (127)
248 PF06792 UPF0261: Uncharacteri 62.2 91 0.002 30.1 10.3 99 141-240 2-126 (403)
249 COG1448 TyrB Aspartate/tyrosin 59.7 57 0.0012 31.1 8.3 87 140-243 171-264 (396)
250 PF03610 EIIA-man: PTS system 59.4 80 0.0017 24.3 8.3 75 142-228 2-77 (116)
251 PRK02399 hypothetical protein; 58.8 1.5E+02 0.0032 28.7 11.0 97 141-239 4-127 (406)
252 smart00827 PKS_AT Acyl transfe 58.3 12 0.00027 34.3 3.9 29 199-228 73-101 (298)
253 PF07519 Tannase: Tannase and 57.8 23 0.00049 35.2 5.8 61 332-392 353-427 (474)
254 PF00698 Acyl_transf_1: Acyl t 57.3 8.3 0.00018 36.0 2.5 30 198-228 74-103 (318)
255 COG3933 Transcriptional antite 55.8 76 0.0017 30.9 8.5 75 140-227 109-183 (470)
256 COG3673 Uncharacterized conser 55.7 1.3E+02 0.0029 28.0 9.7 93 137-229 28-142 (423)
257 COG0529 CysC Adenylylsulfate k 55.3 1E+02 0.0023 26.2 8.2 60 138-200 20-83 (197)
258 TIGR03131 malonate_mdcH malona 53.6 17 0.00037 33.4 3.9 30 198-228 66-95 (295)
259 COG2240 PdxK Pyridoxal/pyridox 53.1 1.2E+02 0.0025 27.8 8.9 97 146-248 11-117 (281)
260 PRK05579 bifunctional phosphop 49.8 1.5E+02 0.0032 28.8 9.7 74 140-216 116-196 (399)
261 TIGR00128 fabD malonyl CoA-acy 49.8 20 0.00042 32.8 3.7 28 200-228 74-102 (290)
262 TIGR00521 coaBC_dfp phosphopan 45.4 1.7E+02 0.0038 28.2 9.5 95 141-242 113-233 (390)
263 cd00006 PTS_IIA_man PTS_IIA, P 45.3 1.4E+02 0.0031 23.1 8.3 71 142-224 3-73 (122)
264 PF13439 Glyco_transf_4: Glyco 44.9 93 0.002 25.1 6.9 88 148-241 10-109 (177)
265 cd03818 GT1_ExpC_like This fam 44.9 1.4E+02 0.0031 28.5 9.0 37 143-181 2-38 (396)
266 TIGR02764 spore_ybaN_pdaB poly 44.8 23 0.00049 30.2 3.1 34 141-174 152-188 (191)
267 PF00448 SRP54: SRP54-type pro 43.1 1.6E+02 0.0035 25.3 8.1 75 156-240 72-148 (196)
268 PF01012 ETF: Electron transfe 43.1 1.9E+02 0.004 23.8 8.8 78 141-230 34-113 (164)
269 cd07198 Patatin Patatin-like p 42.3 40 0.00087 28.1 4.2 33 198-231 16-48 (172)
270 COG4822 CbiK Cobalamin biosynt 42.0 1.7E+02 0.0036 25.7 7.6 62 138-214 136-199 (265)
271 PF00326 Peptidase_S9: Prolyl 41.6 59 0.0013 27.9 5.3 61 139-204 143-208 (213)
272 PF14488 DUF4434: Domain of un 41.3 82 0.0018 26.3 5.8 63 150-215 16-84 (166)
273 PRK09936 hypothetical protein; 41.2 87 0.0019 28.7 6.2 56 152-215 36-91 (296)
274 cd07225 Pat_PNPLA6_PNPLA7 Pata 41.2 39 0.00085 31.4 4.3 33 197-230 32-64 (306)
275 COG3340 PepE Peptidase E [Amin 41.2 1.2E+02 0.0026 26.5 6.7 37 139-175 31-70 (224)
276 PHA02114 hypothetical protein 40.8 41 0.00089 25.1 3.4 34 141-174 83-116 (127)
277 PRK10279 hypothetical protein; 40.6 39 0.00084 31.3 4.1 32 198-230 23-54 (300)
278 TIGR02884 spore_pdaA delta-lac 40.4 38 0.00082 29.8 3.9 35 140-174 186-221 (224)
279 PRK08762 molybdopterin biosynt 40.1 2E+02 0.0044 27.5 9.1 100 138-245 56-170 (376)
280 TIGR02873 spore_ylxY probable 38.8 37 0.00079 30.9 3.6 34 141-174 231-264 (268)
281 cd07207 Pat_ExoU_VipD_like Exo 38.2 48 0.0011 28.1 4.2 32 198-230 17-48 (194)
282 TIGR02816 pfaB_fam PfaB family 37.3 39 0.00084 34.1 3.8 31 199-230 255-286 (538)
283 PF04084 ORC2: Origin recognit 36.9 3.3E+02 0.0071 25.6 9.6 78 143-222 56-150 (326)
284 COG0541 Ffh Signal recognition 36.6 1.7E+02 0.0037 28.6 7.7 69 162-240 177-247 (451)
285 COG1752 RssA Predicted esteras 36.4 47 0.001 30.8 4.0 32 198-230 29-60 (306)
286 PF10081 Abhydrolase_9: Alpha/ 36.1 65 0.0014 29.4 4.6 50 196-245 94-148 (289)
287 COG1073 Hydrolases of the alph 35.8 3.9 8.4E-05 37.0 -3.3 103 139-242 87-197 (299)
288 cd07210 Pat_hypo_W_succinogene 35.5 61 0.0013 28.4 4.4 31 199-230 19-49 (221)
289 cd07227 Pat_Fungal_NTE1 Fungal 35.1 55 0.0012 29.8 4.1 32 198-230 28-59 (269)
290 PRK14457 ribosomal RNA large s 34.6 2.2E+02 0.0048 27.0 8.2 78 142-226 259-336 (345)
291 PF10489 RFPL3_antisense: Ret 33.5 20 0.00044 26.8 0.9 16 1-16 1-16 (124)
292 cd03016 PRX_1cys Peroxiredoxin 33.5 2.5E+02 0.0055 24.1 7.9 90 140-243 26-126 (203)
293 PRK00726 murG undecaprenyldiph 32.5 3.2E+02 0.0069 25.5 9.2 35 142-176 4-38 (357)
294 PRK14974 cell division protein 32.0 3E+02 0.0065 26.0 8.6 69 162-240 217-287 (336)
295 PRK06029 3-octaprenyl-4-hydrox 31.6 2.2E+02 0.0047 24.3 6.9 62 140-208 115-177 (185)
296 KOG1202 Animal-type fatty acid 31.4 62 0.0014 35.8 4.2 24 197-221 571-594 (2376)
297 cd04951 GT1_WbdM_like This fam 31.4 4.1E+02 0.0089 24.3 10.1 35 143-177 3-39 (360)
298 PF01583 APS_kinase: Adenylyls 31.4 1.8E+02 0.0039 24.0 6.2 35 140-174 1-37 (156)
299 PRK11613 folP dihydropteroate 31.2 3E+02 0.0065 25.3 8.2 58 157-223 166-225 (282)
300 cd07209 Pat_hypo_Ecoli_Z1214_l 30.7 74 0.0016 27.7 4.1 33 198-231 16-48 (215)
301 PF05576 Peptidase_S37: PS-10 30.4 76 0.0016 30.7 4.3 57 332-390 351-412 (448)
302 PRK14581 hmsF outer membrane N 29.7 1.1E+02 0.0024 31.8 5.7 79 138-216 46-142 (672)
303 cd05312 NAD_bind_1_malic_enz N 29.3 1.5E+02 0.0034 27.1 5.9 82 142-227 26-124 (279)
304 cd07228 Pat_NTE_like_bacteria 29.1 83 0.0018 26.3 4.0 31 200-231 20-50 (175)
305 PF11713 Peptidase_C80: Peptid 29.0 37 0.0008 28.1 1.8 49 173-221 59-116 (157)
306 PF10605 3HBOH: 3HB-oligomer h 28.9 53 0.0011 33.3 3.1 35 211-245 287-322 (690)
307 PRK13397 3-deoxy-7-phosphohept 28.4 3.2E+02 0.007 24.6 7.7 41 138-178 120-160 (250)
308 COG1576 Uncharacterized conser 28.4 1.5E+02 0.0033 24.4 5.1 49 167-226 67-115 (155)
309 COG0552 FtsY Signal recognitio 27.9 4.3E+02 0.0093 24.9 8.6 92 138-246 136-233 (340)
310 PRK06731 flhF flagellar biosyn 27.7 4.7E+02 0.01 23.8 9.2 75 155-239 141-218 (270)
311 PF05724 TPMT: Thiopurine S-me 27.7 75 0.0016 27.9 3.6 30 141-175 38-67 (218)
312 PF14253 AbiH: Bacteriophage a 27.5 59 0.0013 29.3 3.1 22 200-221 226-247 (270)
313 cd03811 GT1_WabH_like This fam 27.4 4.5E+02 0.0097 23.5 11.5 84 142-228 2-101 (353)
314 KOG1200 Mitochondrial/plastidi 27.3 3.3E+02 0.0071 23.7 7.0 33 142-176 15-47 (256)
315 cd07205 Pat_PNPLA6_PNPLA7_NTE1 27.3 1.1E+02 0.0023 25.5 4.4 32 198-230 18-49 (175)
316 KOG0781 Signal recognition par 27.0 2.3E+02 0.005 28.2 6.8 86 145-240 443-538 (587)
317 PRK12595 bifunctional 3-deoxy- 26.9 3.8E+02 0.0082 25.6 8.4 76 138-219 223-299 (360)
318 PF03205 MobB: Molybdopterin g 26.7 1E+02 0.0022 24.8 4.0 44 142-185 1-46 (140)
319 cd07230 Pat_TGL4-5_like Triacy 26.7 40 0.00087 32.9 1.8 30 204-234 97-126 (421)
320 COG2939 Carboxypeptidase C (ca 26.2 72 0.0016 31.6 3.4 59 332-391 425-490 (498)
321 PF03853 YjeF_N: YjeF-related 26.2 1.1E+02 0.0023 25.6 4.2 36 138-173 23-58 (169)
322 PRK14456 ribosomal RNA large s 26.1 3.3E+02 0.0071 26.1 7.8 75 143-226 283-359 (368)
323 TIGR01425 SRP54_euk signal rec 25.2 5.3E+02 0.011 25.3 9.1 70 160-239 175-246 (429)
324 PRK06849 hypothetical protein; 24.8 5.8E+02 0.013 24.3 9.6 72 141-217 5-85 (389)
325 KOG2872 Uroporphyrinogen decar 24.2 3.1E+02 0.0067 25.3 6.7 70 141-217 253-336 (359)
326 TIGR03709 PPK2_rel_1 polyphosp 24.1 98 0.0021 28.1 3.7 71 138-221 53-126 (264)
327 TIGR00421 ubiX_pad polyprenyl 23.6 4E+02 0.0088 22.5 7.2 45 157-208 129-174 (181)
328 PF02230 Abhydrolase_2: Phosph 23.6 1.9E+02 0.0041 24.9 5.5 57 140-204 155-214 (216)
329 cd07232 Pat_PLPL Patain-like p 23.5 50 0.0011 32.1 1.9 28 210-237 96-123 (407)
330 PRK05282 (alpha)-aspartyl dipe 23.3 4.2E+02 0.009 23.5 7.5 38 139-176 30-70 (233)
331 COG3727 Vsr DNA G:T-mismatch r 23.2 2.9E+02 0.0062 22.2 5.5 15 159-173 100-114 (150)
332 KOG1411 Aspartate aminotransfe 23.0 2E+02 0.0043 27.3 5.4 85 141-241 198-289 (427)
333 TIGR03586 PseI pseudaminic aci 22.9 4.8E+02 0.01 24.6 8.1 81 138-229 132-214 (327)
334 cd07229 Pat_TGL3_like Triacylg 22.0 61 0.0013 31.3 2.1 39 198-237 101-139 (391)
335 COG0218 Predicted GTPase [Gene 21.7 1.3E+02 0.0028 26.0 3.8 56 332-391 135-198 (200)
336 cd08769 DAP_dppA_2 Peptidase M 21.6 3.3E+02 0.0071 24.8 6.5 52 332-389 147-200 (270)
337 cd07231 Pat_SDP1-like Sugar-De 21.4 58 0.0013 30.4 1.7 30 202-232 90-119 (323)
338 PRK13256 thiopurine S-methyltr 21.3 94 0.002 27.5 3.0 29 142-175 45-73 (226)
339 KOG2805 tRNA (5-methylaminomet 21.3 3E+02 0.0066 25.6 6.1 62 141-207 7-68 (377)
340 TIGR03707 PPK2_P_aer polyphosp 21.1 1.2E+02 0.0026 26.9 3.6 71 139-222 29-102 (230)
341 PF03283 PAE: Pectinacetyleste 21.1 2.3E+02 0.005 27.1 5.8 35 209-243 156-194 (361)
342 COG1506 DAP2 Dipeptidyl aminop 21.1 3.2E+02 0.0068 28.3 7.2 44 138-181 549-597 (620)
343 PRK13982 bifunctional SbtC-lik 21.0 7.6E+02 0.017 24.6 9.4 61 140-203 180-247 (475)
344 cd07224 Pat_like Patatin-like 21.0 1.6E+02 0.0034 26.1 4.4 34 198-231 17-51 (233)
345 COG0337 AroB 3-dehydroquinate 20.8 6.3E+02 0.014 24.1 8.4 67 142-216 35-101 (360)
346 PF09419 PGP_phosphatase: Mito 20.5 3.3E+02 0.0071 22.8 5.9 54 162-219 35-88 (168)
347 PF02590 SPOUT_MTase: Predicte 20.3 1.7E+02 0.0036 24.2 4.1 62 167-244 67-128 (155)
348 COG1255 Uncharacterized protei 20.3 1E+02 0.0022 24.0 2.6 23 154-176 23-45 (129)
349 cd08178 AAD_C C-terminal alcoh 20.1 3.6E+02 0.0079 26.0 7.1 63 142-215 23-86 (398)
350 TIGR00824 EIIA-man PTS system, 20.1 4.1E+02 0.009 20.4 7.5 73 142-226 4-76 (116)
351 PRK07313 phosphopantothenoylcy 20.0 3.5E+02 0.0077 22.9 6.2 62 139-203 112-179 (182)
No 1
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=3.9e-33 Score=253.58 Aligned_cols=248 Identities=34% Similarity=0.645 Sum_probs=166.2
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+....++++++++|+.++++.++..++++|+||||||.
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchH
Confidence 59999999999999999999998888999999999999997655456889999999999999998634999999999999
Q ss_pred HHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCc
Q 016141 222 CISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAA 301 (394)
Q Consensus 222 ~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
+++.+|.++|++|+++|++++.....+......+...... . .....+.......................++.....
T Consensus 85 ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (255)
T PLN02965 85 SVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEG--T-EKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPL 161 (255)
T ss_pred HHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhc--c-ccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCH
Confidence 9999999999999999999986432221111111000000 0 000000000000000000001111222222222222
Q ss_pred hhHHHHHHhccccCCccccccccc-CCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccChHH
Q 016141 302 KDVELALISMRPIPFAPVLEKLSV-SDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKPRA 380 (394)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p~~ 380 (394)
.........+.............. .....+++|+++|+|++|.++|++..+.+.+.++++++++++++||++++|+|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~ 241 (255)
T PLN02965 162 EDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTT 241 (255)
T ss_pred HHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHH
Confidence 111111111111111111000001 1233468999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 016141 381 LHRILVEISKIT 392 (394)
Q Consensus 381 v~~~i~~fl~~~ 392 (394)
|++.|.+|++.-
T Consensus 242 v~~~l~~~~~~~ 253 (255)
T PLN02965 242 LFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHh
Confidence 999999998753
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=6.3e-32 Score=250.84 Aligned_cols=243 Identities=19% Similarity=0.184 Sum_probs=162.9
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC------CCccCHHHHHHHHHHHHHHhCCCCcEE
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT------NSITSLEQYVKPLIDTFNELGNEEKVI 212 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~l~~l~~~~~~~ 212 (394)
++++|||+||++++...|..+++.|.++ |+|+++|+||||.|+.+. ...++++++++++.+++++++.+ +++
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~ 105 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGD-PAF 105 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCC-CeE
Confidence 4689999999999999999999999987 899999999999998653 13589999999999999999987 999
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEeecccCCCC---c-ch----HHHHHhhcCchH----HHH------HHHHHHHh
Q 016141 213 LVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSG---Q-SA----LDTISQQMGSND----LMQ------QAQIFLYA 274 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~---~-~~----~~~~~~~~~~~~----~~~------~~~~~~~~ 274 (394)
|+||||||++++.+|.++|++|+++|++++...... . .. ...+........ +.. .....+..
T Consensus 106 lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (294)
T PLN02824 106 VICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQ 185 (294)
T ss_pred EEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHH
Confidence 999999999999999999999999999998653211 0 00 001111000000 000 00000000
Q ss_pred cCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHH
Q 016141 275 NGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAM 354 (394)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l 354 (394)
..... ..........+................+..... ......+..+++|+|+|+|++|.++|.+..+.+
T Consensus 186 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~ 256 (294)
T PLN02824 186 -CYHDD---SAVTDELVEAILRPGLEPGAVDVFLDFISYSGG-----PLPEELLPAVKCPVLIAWGEKDPWEPVELGRAY 256 (294)
T ss_pred -hccCh---hhccHHHHHHHHhccCCchHHHHHHHHhccccc-----cchHHHHhhcCCCeEEEEecCCCCCChHHHHHH
Confidence 00000 001111111111110111000000000000000 000111234579999999999999999999998
Q ss_pred HHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 355 INSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 355 ~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
.+..+++++++++++||++++|+|++|++.|.+|++++
T Consensus 257 ~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 257 ANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 88888899999999999999999999999999999864
No 3
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.1e-31 Score=250.15 Aligned_cols=247 Identities=18% Similarity=0.129 Sum_probs=162.6
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
.+++|+|||+||++.+...|..+++.|.+.||+|+++|+||||.|+.+.. ..++++++++++.+++++++.+ +++|+|
T Consensus 43 ~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~v~lvG 121 (302)
T PRK00870 43 PADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLT-DVTLVC 121 (302)
T ss_pred CCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 34578999999999999999999999988899999999999999976542 4579999999999999999988 999999
Q ss_pred eChHHHHHHHHHHhCCcccceEEEeecccCCCCcc---hHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHH
Q 016141 216 HDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS---ALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLR 292 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (394)
|||||.+|+.+|.++|++|.++|++++........ ....+......... .....+.. .... .........
T Consensus 122 hS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-----~~~~~~~~~ 194 (302)
T PRK00870 122 QDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPV-LPVGRLVN-GGTV-----RDLSDAVRA 194 (302)
T ss_pred EChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCch-hhHHHHhh-cccc-----ccCCHHHHH
Confidence 99999999999999999999999999754321110 01111110000000 00000000 0000 000111111
Q ss_pred HHhcccCCchhHHH---HHHhccc-c--CCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCce---E
Q 016141 293 DLLFNRSAAKDVEL---ALISMRP-I--PFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPEL---V 363 (394)
Q Consensus 293 ~~~~~~~~~~~~~~---~~~~~~~-~--~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~---~ 363 (394)
. +........... ....+.. . ................+++|+++|+|++|.++|... +.+.+.+++.+ +
T Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~ 272 (302)
T PRK00870 195 A-YDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPH 272 (302)
T ss_pred H-hhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccce
Confidence 1 100000000000 0000000 0 000000000011234557999999999999999876 88899998876 8
Q ss_pred EEEcCCCccCcccChHHHHHHHHHHHhhhc
Q 016141 364 FEIKGSDHAPFFSKPRALHRILVEISKITH 393 (394)
Q Consensus 364 ~~i~~agH~~~~e~p~~v~~~i~~fl~~~~ 393 (394)
++++++||++++|+|++|++.|.+|++.++
T Consensus 273 ~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 302 (302)
T PRK00870 273 PTIKGAGHFLQEDSGEELAEAVLEFIRATP 302 (302)
T ss_pred eeecCCCccchhhChHHHHHHHHHHHhcCC
Confidence 899999999999999999999999998874
No 4
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.98 E-value=2e-30 Score=237.47 Aligned_cols=252 Identities=38% Similarity=0.682 Sum_probs=171.5
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGH 216 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 216 (394)
++++|+|||+||++.+...|..++..|.+.||+|+++|+||||.|.......++++++++++.++++.++..++++||||
T Consensus 15 ~~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGh 94 (273)
T PLN02211 15 NRQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGH 94 (273)
T ss_pred cCCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEE
Confidence 46678999999999999999999999998899999999999998864443458999999999999999853249999999
Q ss_pred ChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHH--HHHhcCCCCCCCcchhhHHHHHHH
Q 016141 217 DFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQI--FLYANGKQNPPTSIDLDRTLLRDL 294 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (394)
||||.+++.++.++|++|+++|++++.....+......+... .......... ........................
T Consensus 95 S~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (273)
T PLN02211 95 SAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDG--VPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKI 172 (273)
T ss_pred CchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhcc--ccchhhhccceeeeeccCCCCCCceeeeCHHHHHHH
Confidence 999999999999999999999999886543332222111111 0000000000 000000000011111222333344
Q ss_pred hcccCCchhHHHHHHhccccCCcccccccccC-CCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccC
Q 016141 295 LFNRSAAKDVELALISMRPIPFAPVLEKLSVS-DDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAP 373 (394)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~ 373 (394)
++...+..........+.......+....... ...+.++|+++|+|++|..+|++.++.+.+.+++.+++.++ +||.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p 251 (273)
T PLN02211 173 LYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSP 251 (273)
T ss_pred HhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCc
Confidence 44444443333333333322222221111101 11233799999999999999999999999999999999997 89999
Q ss_pred cccChHHHHHHHHHHHhh
Q 016141 374 FFSKPRALHRILVEISKI 391 (394)
Q Consensus 374 ~~e~p~~v~~~i~~fl~~ 391 (394)
++++|+++++.|.++...
T Consensus 252 ~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 252 FFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 999999999999998653
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.98 E-value=9.7e-31 Score=240.63 Aligned_cols=237 Identities=14% Similarity=0.126 Sum_probs=160.8
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++++.+++++++++ +++||||||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~~-~~~~~~~~~~~~~~~i~~l~~~-~~~LvG~S~ 100 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPD-LEVIAFDVPGVGGSSTPR-HPYRFPGLAKLAARMLDYLDYG-QVNAIGVSW 100 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccC-ceEEEECCCCCCCCCCCC-CcCcHHHHHHHHHHHHHHhCcC-ceEEEEECH
Confidence 3479999999999999999999999875 999999999999998653 4578999999999999999988 999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcc-hHHHHHhhcCchHHHHHH-----HHHHHhcCCCCCCCcchhhHHHHH
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQS-ALDTISQQMGSNDLMQQA-----QIFLYANGKQNPPTSIDLDRTLLR 292 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 292 (394)
||.+++.+|.++|++|+++|+++++....... .................. ....+........ .... ...
T Consensus 101 GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~ 176 (276)
T TIGR02240 101 GGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDP---ELAM-AHA 176 (276)
T ss_pred HHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccc---hhhh-hhh
Confidence 99999999999999999999999876421111 001100000000000000 0000000000000 0000 000
Q ss_pred HHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCcc
Q 016141 293 DLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHA 372 (394)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~ 372 (394)
........ ............... ...+..+++|+|+|+|++|.++|++..+.+.+.+++++++++++ ||+
T Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~--------~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~ 246 (276)
T TIGR02240 177 SKVRSGGK-LGYYWQLFAGLGWTS--------IHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHL 246 (276)
T ss_pred hhcccCCC-chHHHHHHHHcCCch--------hhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCc
Confidence 00000000 000100000000000 11234457999999999999999999999999999999999985 999
Q ss_pred CcccChHHHHHHHHHHHhhh
Q 016141 373 PFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 373 ~~~e~p~~v~~~i~~fl~~~ 392 (394)
+++|+|+++++.|.+|+++.
T Consensus 247 ~~~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 247 FLITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hhhccHHHHHHHHHHHHHHh
Confidence 99999999999999999865
No 6
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.6e-30 Score=246.20 Aligned_cols=240 Identities=18% Similarity=0.232 Sum_probs=157.7
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
++|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.+++++++++ +++|+||||
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~ 164 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQK-PTVLIGNSV 164 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCC-CeEEEEECH
Confidence 358999999999999999999999987 599999999999999876545689999999999999999997 999999999
Q ss_pred HHHHHHHHHH-hCCcccceEEEeecccCCCCcchHHHHHh--h-------------cC-chHHHHH------HHHHHHhc
Q 016141 219 GGACISYVME-LFPSKVAKAVFIAATMLTSGQSALDTISQ--Q-------------MG-SNDLMQQ------AQIFLYAN 275 (394)
Q Consensus 219 Gg~~a~~~a~-~~p~~v~~lVli~~~~~~~~~~~~~~~~~--~-------------~~-~~~~~~~------~~~~~~~~ 275 (394)
||.+++.++. .+|++|+++|++++............... . .. ...+... ...++. .
T Consensus 165 Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 243 (360)
T PLN02679 165 GSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILL-S 243 (360)
T ss_pred HHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHH-H
Confidence 9999999887 47999999999998643211100000000 0 00 0000000 000000 0
Q ss_pred CCCCCCCcchhhHHHHHHHhc--ccCCchhHHHHHHh-ccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHH--
Q 016141 276 GKQNPPTSIDLDRTLLRDLLF--NRSAAKDVELALIS-MRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSV-- 350 (394)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~-- 350 (394)
....... ........... .............. ....+.... ...+++|+|+|+|++|.++|++.
T Consensus 244 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~i~~PtLii~G~~D~~~p~~~~~ 312 (360)
T PLN02679 244 VYGNKEA---VDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKL--------IPRISLPILVLWGDQDPFTPLDGPV 312 (360)
T ss_pred hccCccc---CCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHH--------hhhcCCCEEEEEeCCCCCcCchhhH
Confidence 0000000 01111111100 00000000000000 000111111 23446999999999999998763
Q ss_pred ---HHHHHHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 351 ---QEAMINSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 351 ---~~~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
.+.+.+.++++++++++++||++++|+|++|++.|.+||++.
T Consensus 313 ~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 313 GKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred HHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 345667789999999999999999999999999999999763
No 7
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=3e-30 Score=239.71 Aligned_cols=250 Identities=15% Similarity=0.155 Sum_probs=158.2
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+++++|||+||++++...|..+++.|.+. |+|+++|+||||.|+.+. ..++++++++|+.+++++++.+ +++|+|||
T Consensus 25 G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~-~~~~~~~~a~dl~~ll~~l~~~-~~~lvGhS 101 (295)
T PRK03592 25 GEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPD-IDYTFADHARYLDAWFDALGLD-DVVLVGHD 101 (295)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC-CeEEEEEC
Confidence 45789999999999999999999999998 699999999999998764 4589999999999999999997 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcc-----hHHHHHhhcCc---hHHHHHHHHHHHhcCCCCC-CCcchhhH
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQS-----ALDTISQQMGS---NDLMQQAQIFLYANGKQNP-PTSIDLDR 288 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 288 (394)
|||.+|+.+|.++|++|+++|++++........ ....+...... .........+......... ........
T Consensus 102 ~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (295)
T PRK03592 102 WGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEM 181 (295)
T ss_pred HHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHH
Confidence 999999999999999999999999854321100 00000000000 0000000000000000000 00000000
Q ss_pred HHHHHHhcccCCchhHHHH-HHhccccCC----cccccccccCCCCCCCcCEEEEecCCCCCCCh-HHHHHHHHhCCCce
Q 016141 289 TLLRDLLFNRSAAKDVELA-LISMRPIPF----APVLEKLSVSDDNYGSVPRFYIKTLQDCAIPV-SVQEAMINSNPPEL 362 (394)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~-~~~~~l~~~~~~~~ 362 (394)
..+...+... ........ ......... ....... ...+..+++|+|+|+|++|.++++ ...+.+.+..++++
T Consensus 182 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~ 259 (295)
T PRK03592 182 AVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVVALVEEY-AQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLE 259 (295)
T ss_pred HHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhHhhhhHh-HHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcc
Confidence 0111111000 00000000 000000000 0000000 011344579999999999999954 44445556678899
Q ss_pred EEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 363 VFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 363 ~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
+++++++||++++|+|+++++.|.+|+++.
T Consensus 260 ~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 260 ITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred eeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999865
No 8
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=4.3e-30 Score=229.51 Aligned_cols=247 Identities=18% Similarity=0.236 Sum_probs=170.2
Q ss_pred CCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 136 ESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 136 ~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
+.+++|.|+++||++..+..|+.++..|+.+||+|+|+|+||+|.|+.+.. ..|++..++.|+..+|++++.+ +++++
T Consensus 40 g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~-k~~lv 118 (322)
T KOG4178|consen 40 GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLK-KAFLV 118 (322)
T ss_pred cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccc-eeEEE
Confidence 457889999999999999999999999999999999999999999998877 7899999999999999999987 99999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhc-------------Cch-----HHHHHHHHHHHhcC
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM-------------GSN-----DLMQQAQIFLYANG 276 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~ 276 (394)
||+||+++|..+|..+|++|+++|.++.+...+.....+...... ..+ ...+.....+....
T Consensus 119 gHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~ 198 (322)
T KOG4178|consen 119 GHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRK 198 (322)
T ss_pred eccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccc
Confidence 999999999999999999999999999877622211111111100 000 01111111111111
Q ss_pred CCCCCC-----------cchhhHHHHHHHhcccCCchhHHHHHHhccccCCccccccc---ccCCCCCCCcCEEEEecCC
Q 016141 277 KQNPPT-----------SIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKL---SVSDDNYGSVPRFYIKTLQ 342 (394)
Q Consensus 277 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~PvLii~G~~ 342 (394)
...+.. ....+...+...+.. ..... ..++...+..- .......+++|+++|+|+.
T Consensus 199 ~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~----~g~~g------plNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~ 268 (322)
T KOG4178|consen 199 TPGPLIVPKQPNENPLWLTEEDIAFYVSKFQI----DGFTG------PLNYYRNFRRNWEAAPWALAKITIPVLFIWGDL 268 (322)
T ss_pred cCCccccCCCCCCccchhhHHHHHHHHhcccc----ccccc------cchhhHHHhhCchhccccccccccceEEEEecC
Confidence 110000 001111111111100 00000 01111111110 0112344579999999999
Q ss_pred CCCCChH-HHHHHHHhCCCc-eEEEEcCCCccCcccChHHHHHHHHHHHhhhc
Q 016141 343 DCAIPVS-VQEAMINSNPPE-LVFEIKGSDHAPFFSKPRALHRILVEISKITH 393 (394)
Q Consensus 343 D~~vp~~-~~~~l~~~~~~~-~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~~ 393 (394)
|.+.+.. ..+.+.+.+++. +.++++|+||+++.|+|+++++.|.+|+++..
T Consensus 269 D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 269 DPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSFS 321 (322)
T ss_pred cccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhhc
Confidence 9999765 566677777875 88999999999999999999999999998754
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=6.8e-30 Score=235.98 Aligned_cols=249 Identities=15% Similarity=0.210 Sum_probs=158.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+++++|||+||++.+...|..+++.|.+. |+|+++|+||||.|+.+....++++++++++.+++++++.+ +++++|||
T Consensus 32 G~~~~iv~lHG~~~~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lvG~S 109 (286)
T PRK03204 32 GTGPPILLCHGNPTWSFLYRDIIVALRDR-FRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLD-RYLSMGQD 109 (286)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHhCC-cEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCC-CEEEEEEC
Confidence 45689999999999999999999999875 99999999999999876544678999999999999999987 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHH-HH-HHHHHhcCCCCCCCcchhhHHHHHHHh
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQ-QA-QIFLYANGKQNPPTSIDLDRTLLRDLL 295 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (394)
|||.+++.++..+|++|+++|++++............+........... .. ..+.......... ...........+
T Consensus 110 ~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 187 (286)
T PRK03204 110 WGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGT-EHRPSSAVMAHY- 187 (286)
T ss_pred ccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccc-cCCCCHHHHHHh-
Confidence 9999999999999999999999887643221101111111000000000 00 0000000000000 000111111111
Q ss_pred cccCCchhHHHHHHhc--cccCCcccccccccC-CCCCCCcCEEEEecCCCCCCChH-HHHHHHHhCCCceEEEEcCCCc
Q 016141 296 FNRSAAKDVELALISM--RPIPFAPVLEKLSVS-DDNYGSVPRFYIKTLQDCAIPVS-VQEAMINSNPPELVFEIKGSDH 371 (394)
Q Consensus 296 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~-~~~~~~~PvLii~G~~D~~vp~~-~~~~l~~~~~~~~~~~i~~agH 371 (394)
...............+ ........+..+... .....++|||+|+|++|.++++. ..+.+.+.+++.++++++++||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH 267 (286)
T PRK03204 188 RAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKH 267 (286)
T ss_pred cCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcc
Confidence 1111111110000000 000001111111000 00112699999999999988654 5788999999999999999999
Q ss_pred cCcccChHHHHHHHHHHHh
Q 016141 372 APFFSKPRALHRILVEISK 390 (394)
Q Consensus 372 ~~~~e~p~~v~~~i~~fl~ 390 (394)
++++|+|+++++.|.+|+.
T Consensus 268 ~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 268 FIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred cccccCHHHHHHHHHHhcC
Confidence 9999999999999999973
No 10
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.97 E-value=1.8e-29 Score=229.56 Aligned_cols=233 Identities=24% Similarity=0.335 Sum_probs=152.6
Q ss_pred CC-ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 139 ET-SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 139 ~~-~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
++ |+|||+||++++...|..+++.|.++ |+|+++|+||||.|... ..++++++++++.+ ++++ +++|||||
T Consensus 11 ~g~~~ivllHG~~~~~~~w~~~~~~L~~~-~~vi~~Dl~G~G~S~~~--~~~~~~~~~~~l~~----~~~~-~~~lvGhS 82 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAEVWRCIDEELSSH-FTLHLVDLPGFGRSRGF--GALSLADMAEAVLQ----QAPD-KAIWLGWS 82 (256)
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHhcC-CEEEEecCCCCCCCCCC--CCCCHHHHHHHHHh----cCCC-CeEEEEEC
Confidence 44 46999999999999999999999876 99999999999999754 34688887777653 4565 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCc----c----hHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHH
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQ----S----ALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (394)
|||.+|+.+|.++|++|+++|++++....... . ....+..... .........+........ ........
T Consensus 83 ~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~- 159 (256)
T PRK10349 83 LGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLS-DDFQRTVERFLALQTMGT-ETARQDAR- 159 (256)
T ss_pred HHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHH-hchHHHHHHHHHHHHccC-chHHHHHH-
Confidence 99999999999999999999999885432110 0 0011100000 000011111111000000 00000000
Q ss_pred HHHHHhcccC-CchhHH-HHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEc
Q 016141 290 LLRDLLFNRS-AAKDVE-LALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIK 367 (394)
Q Consensus 290 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~ 367 (394)
.+........ ...... .....+...+....+. .+++|+|+|+|++|.++|.+..+.+.+.++++++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--------~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~~~~~~i~ 231 (256)
T PRK10349 160 ALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQ--------NVSMPFLRLYGYLDGLVPRKVVPMLDKLWPHSESYIFA 231 (256)
T ss_pred HHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHh--------hcCCCeEEEecCCCccCCHHHHHHHHHhCCCCeEEEeC
Confidence 1111111111 111111 1111111222223333 34699999999999999999999999999999999999
Q ss_pred CCCccCcccChHHHHHHHHHHHh
Q 016141 368 GSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 368 ~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
++||++++|+|++|++.|.+|-+
T Consensus 232 ~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 232 KAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCCCccccCHHHHHHHHHHHhc
Confidence 99999999999999999999865
No 11
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.97 E-value=2.3e-29 Score=231.97 Aligned_cols=244 Identities=16% Similarity=0.209 Sum_probs=154.4
Q ss_pred CCCceEEEEcCCCCchhcHHHH---HHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKT---MTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~---~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
+++|+|||+||++.+...|..+ +..|.+.||+|+++|+||||.|+.+.........+++++.++++.++.+ +++++
T Consensus 28 g~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~-~~~lv 106 (282)
T TIGR03343 28 GNGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIE-KAHLV 106 (282)
T ss_pred CCCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCC-CeeEE
Confidence 4568999999999888877643 4566677899999999999999765322222225688999999999998 99999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCC----c--chHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhH
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSG----Q--SALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDR 288 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (394)
||||||++++.+|.++|++|+++|++++...... . .....+........ ......+...... ..... ..
T Consensus 107 G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~---~~ 181 (282)
T TIGR03343 107 GNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPS-YETLKQMLNVFLF-DQSLI---TE 181 (282)
T ss_pred EECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCC-HHHHHHHHhhCcc-CcccC---cH
Confidence 9999999999999999999999999997642111 0 00011110000000 0001111110000 00000 01
Q ss_pred HHHHHHhcccCC-chhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEc
Q 016141 289 TLLRDLLFNRSA-AKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIK 367 (394)
Q Consensus 289 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~ 367 (394)
............ ................. ... ....+..+++|+|+|+|++|.+++++..+.+.+.++++++++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~ 258 (282)
T TIGR03343 182 ELLQGRWENIQRQPEHLKNFLISSQKAPLS-TWD--VTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFS 258 (282)
T ss_pred HHHHhHHHHhhcCHHHHHHHHHhccccccc-cch--HHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeC
Confidence 111100000000 00000000000000000 000 00113345799999999999999999999999999999999999
Q ss_pred CCCccCcccChHHHHHHHHHHHh
Q 016141 368 GSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 368 ~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
++||+++.|+|++|++.|.+|++
T Consensus 259 ~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 259 RCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCcCCcccCHHHHHHHHHHHhh
Confidence 99999999999999999999986
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.97 E-value=2.2e-29 Score=228.56 Aligned_cols=237 Identities=19% Similarity=0.185 Sum_probs=159.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
..+|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..+. .++++++++|+.+++++++.+ +++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~--~~~~~~~~~d~~~~l~~l~~~-~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDP--VMNYPAMAQDLLDTLDALQIE-KATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCC--CCCHHHHHHHHHHHHHHcCCC-ceEEEEEC
Confidence 5678999999999999999999999987 4999999999999997643 479999999999999999987 89999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHH----HhhcCch-HHHHHHHHHHHhcCCCCCCCcchhhHHHHH
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTI----SQQMGSN-DLMQQAQIFLYANGKQNPPTSIDLDRTLLR 292 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (394)
|||.+++.+|.++|++|+++|++++............+ ....... ............. . ..........
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~ 163 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTRQQAAAIMRQH-L-----NEEGVIQFLL 163 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccHHHHHHHHHHh-c-----CCHHHHHHHH
Confidence 99999999999999999999999864322111100000 0000000 0000000000000 0 0000000000
Q ss_pred HHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCcc
Q 016141 293 DLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHA 372 (394)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~ 372 (394)
..+...............+... ........+++|+|+|+|++|..++.+..+.+.+.++++++++++++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 235 (255)
T PRK10673 164 KSFVDGEWRFNVPVLWDQYPHI--------VGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHW 235 (255)
T ss_pred hcCCcceeEeeHHHHHHhHHHH--------hCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCe
Confidence 0000000000000000000000 00112233469999999999999999999999999999999999999999
Q ss_pred CcccChHHHHHHHHHHHhhh
Q 016141 373 PFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 373 ~~~e~p~~v~~~i~~fl~~~ 392 (394)
+++++|+++++.|.+||+++
T Consensus 236 ~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 236 VHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred eeccCHHHHHHHHHHHHhcC
Confidence 99999999999999999863
No 13
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.97 E-value=4.4e-29 Score=225.91 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=162.1
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
.++|+|||+||++++...|..+++.|.+ ||+|+++|+||||.|..+....++++++++++.++++.++.+ +++++|||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~l~G~S 88 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIE-RFHFVGHA 88 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCC-cEEEEEec
Confidence 4578999999999999999999988876 599999999999999876556689999999999999999987 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcch--HHHH---HhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHH
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQSA--LDTI---SQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLR 292 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (394)
|||++|+.++.++|++|+++|++++......... .... ...............+.+.. .............. .
T Consensus 89 ~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 166 (257)
T TIGR03611 89 LGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPA-DWISENAARLAADE-A 166 (257)
T ss_pred hhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccc-cHhhccchhhhhhh-h
Confidence 9999999999999999999999998654321110 0000 00000000000000000000 00000000000000 0
Q ss_pred HHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCcc
Q 016141 293 DLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHA 372 (394)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~ 372 (394)
..................+...+.... ...+++|+++++|++|.++|++..+.+.+.+++.+++.++++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~ 238 (257)
T TIGR03611 167 HALAHFPGKANVLRRINALEAFDVSAR--------LDRIQHPVLLIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHA 238 (257)
T ss_pred hcccccCccHHHHHHHHHHHcCCcHHH--------hcccCccEEEEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCC
Confidence 000000000111111111111122111 233469999999999999999999999999999999999999999
Q ss_pred CcccChHHHHHHHHHHHh
Q 016141 373 PFFSKPRALHRILVEISK 390 (394)
Q Consensus 373 ~~~e~p~~v~~~i~~fl~ 390 (394)
+++++|+++++.|.+||+
T Consensus 239 ~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 239 SNVTDPETFNRALLDFLK 256 (257)
T ss_pred ccccCHHHHHHHHHHHhc
Confidence 999999999999999986
No 14
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.97 E-value=6.6e-29 Score=228.06 Aligned_cols=238 Identities=18% Similarity=0.196 Sum_probs=160.5
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
.+|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+....++++++++++.+++++++++ +++|+||||
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~-~~~lvG~S~ 104 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLS-PDGVIGHSA 104 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCC-CceEEEECc
Confidence 468999999999999999999999987 499999999999999876655689999999999999999887 999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcc---hHHHHHhh----cCchHHHHH-------HHHHHHhcCCCCCCCcc
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQS---ALDTISQQ----MGSNDLMQQ-------AQIFLYANGKQNPPTSI 284 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~---~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 284 (394)
||.+++.+|.++|++++++|++++........ ....+... ......... ...+.... .. ...
T Consensus 105 Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~ 180 (278)
T TIGR03056 105 GAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT--GS--LLD 180 (278)
T ss_pred cHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc--cc--ccc
Confidence 99999999999999999999998864321100 00000000 000000000 00000000 00 000
Q ss_pred hhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEE
Q 016141 285 DLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVF 364 (394)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~ 364 (394)
......+....... .........+........ ......+++|+++|+|++|..+|.+..+.+.+.+++++++
T Consensus 181 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~ 252 (278)
T TIGR03056 181 KAGMTYYGRLIRSP---AHVDGALSMMAQWDLAPL-----NRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVPTATLH 252 (278)
T ss_pred cchhhHHHHhhcCc---hhhhHHHHHhhcccccch-----hhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEE
Confidence 00000111110000 000000000111111100 0123345799999999999999999999999999999999
Q ss_pred EEcCCCccCcccChHHHHHHHHHHHh
Q 016141 365 EIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 365 ~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
.++++||++++|+|+++++.|.+|++
T Consensus 253 ~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 253 VVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred EECCCCCcccccCHHHHHHHHHHHhC
Confidence 99999999999999999999999984
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=4e-28 Score=234.97 Aligned_cols=246 Identities=16% Similarity=0.165 Sum_probs=157.6
Q ss_pred CceEEEEcCCCCchhcHHH-HHHHHH---hCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHH-HHHHHhCCCCcEEEE
Q 016141 140 TSHFVLVHGGGFGAWCWYK-TMTLLK---ESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI-DTFNELGNEEKVILV 214 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~-~~~~l~---~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~l~~l~~~~~~~lv 214 (394)
+++|||+||++++...|.. +++.|. +.+|+|+++|+||||.|+.+....++++++++++. .+++.++.+ +++++
T Consensus 201 k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~-k~~LV 279 (481)
T PLN03087 201 KEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVK-SFHIV 279 (481)
T ss_pred CCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCC-CEEEE
Confidence 5799999999999999985 446665 35899999999999999876556689999999995 899999998 99999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcch--HHHHHhh----cCch--HHHHHHHHHHHhcCCCCCC---Cc
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA--LDTISQQ----MGSN--DLMQQAQIFLYANGKQNPP---TS 283 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~--~~~~~~~----~~~~--~~~~~~~~~~~~~~~~~~~---~~ 283 (394)
||||||++++.+|.++|++|+++|+++++........ ....... .... .+......+ +........ ..
T Consensus 280 GhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-~~~~~~~~~~~~~~ 358 (481)
T PLN03087 280 AHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACW-YEHISRTICLVICK 358 (481)
T ss_pred EECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHH-HHHHHhhhhccccc
Confidence 9999999999999999999999999998654322111 0110000 0000 000000000 000000000 00
Q ss_pred chhhHHHHHHHhcccCCchhHHH-------------HH---HhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCC
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVEL-------------AL---ISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIP 347 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~-------------~~---~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp 347 (394)
.......+...+... ....... .. ...........+.. ....+++|+|+|+|++|.++|
T Consensus 359 ~~~~~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~----l~~~I~vPtLII~Ge~D~ivP 433 (481)
T PLN03087 359 NHRLWEFLTRLLTRN-RMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDH----VRDQLKCDVAIFHGGDDELIP 433 (481)
T ss_pred chHHHHHHHHHhhhh-hhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHH----HHHhCCCCEEEEEECCCCCCC
Confidence 000000000000000 0000000 00 00000000000110 011246999999999999999
Q ss_pred hHHHHHHHHhCCCceEEEEcCCCccCcc-cChHHHHHHHHHHHhhh
Q 016141 348 VSVQEAMINSNPPELVFEIKGSDHAPFF-SKPRALHRILVEISKIT 392 (394)
Q Consensus 348 ~~~~~~l~~~~~~~~~~~i~~agH~~~~-e~p~~v~~~i~~fl~~~ 392 (394)
++..+.+++.+|++++++++++||++++ |+|+++++.|.+|+...
T Consensus 434 ~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~~ 479 (481)
T PLN03087 434 VECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIWRRS 479 (481)
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999886 99999999999998753
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=4.8e-29 Score=236.90 Aligned_cols=243 Identities=15% Similarity=0.146 Sum_probs=156.7
Q ss_pred CCCceEEEEcCCCCchhc-HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC-----CcE
Q 016141 138 PETSHFVLVHGGGFGAWC-WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE-----EKV 211 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~-----~~~ 211 (394)
..+++|||+||++++... |..++..|++.||+|+++|+||||.|+.......+++++++|+.++++.+... .++
T Consensus 85 ~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~ 164 (349)
T PLN02385 85 RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPS 164 (349)
T ss_pred CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCE
Confidence 346799999999888764 68899999988999999999999999865444568999999999999887532 279
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhc-CCCCC---C-Ccchh
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYAN-GKQNP---P-TSIDL 286 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~-~~~~~ 286 (394)
+|+||||||++++.++.++|++|.++|+++|.............. .............. ..... . .....
T Consensus 165 ~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 239 (349)
T PLN02385 165 FLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV-----LQILILLANLLPKAKLVPQKDLAELAFRDL 239 (349)
T ss_pred EEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH-----HHHHHHHHHHCCCceecCCCccccccccCH
Confidence 999999999999999999999999999999865321110000000 00000000000000 00000 0 00000
Q ss_pred hHHHHHHHhc-ccCCchhHHHHHHhccc-cCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC--CCce
Q 016141 287 DRTLLRDLLF-NRSAAKDVELALISMRP-IPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN--PPEL 362 (394)
Q Consensus 287 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~--~~~~ 362 (394)
.......... ..............+.. .+.. ..+..+++|+|+|+|++|.++|++..+.+.+.+ ++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~ 311 (349)
T PLN02385 240 KKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIE--------MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKK 311 (349)
T ss_pred HHHHHhhcCcceeCCCcchHHHHHHHHHHHHHH--------HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCce
Confidence 0000000000 00000000000000000 0001 122345799999999999999999999998887 4689
Q ss_pred EEEEcCCCccCcccChHH----HHHHHHHHHhhhc
Q 016141 363 VFEIKGSDHAPFFSKPRA----LHRILVEISKITH 393 (394)
Q Consensus 363 ~~~i~~agH~~~~e~p~~----v~~~i~~fl~~~~ 393 (394)
+++++++||+++.|+|++ +.+.|.+||+++.
T Consensus 312 l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 312 LKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred EEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999999987 8888999998764
No 17
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=2.4e-28 Score=219.56 Aligned_cols=237 Identities=19% Similarity=0.269 Sum_probs=160.4
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
++|+|||+||++.+...|..+++.|.. ||+|+++|+||||.|..+. ..++++++++++.++++.++.+ +++++||||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~~-~~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~i~~~~~~-~v~liG~S~ 88 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALTP-DFRVLRYDKRGHGLSDAPE-GPYSIEDLADDVLALLDHLGIE-RAVFCGLSL 88 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhhc-ccEEEEecCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHhCCC-ceEEEEeCc
Confidence 568999999999999999999998875 7999999999999997543 4679999999999999999887 999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcc-hHHHHHhhc--CchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHh
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQS-ALDTISQQM--GSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLL 295 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (394)
||++++.+|.++|++|+++|++++........ +...+.... ................... .. .......+...+
T Consensus 89 Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 165 (251)
T TIGR02427 89 GGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFR-EA--HPARLDLYRNML 165 (251)
T ss_pred hHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccc-cC--ChHHHHHHHHHH
Confidence 99999999999999999999998764322211 111111000 0000000000000000000 00 000001111111
Q ss_pred cccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcc
Q 016141 296 FNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFF 375 (394)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~ 375 (394)
... ...........+...+.... ...+++|+++++|++|.++|.+..+.+.+.+++.++++++++||++++
T Consensus 166 ~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 236 (251)
T TIGR02427 166 VRQ-PPDGYAGCCAAIRDADFRDR--------LGAIAVPTLCIAGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCV 236 (251)
T ss_pred Hhc-CHHHHHHHHHHHhcccHHHH--------hhhcCCCeEEEEeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccc
Confidence 110 11111111111111111112 223469999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHh
Q 016141 376 SKPRALHRILVEISK 390 (394)
Q Consensus 376 e~p~~v~~~i~~fl~ 390 (394)
++|+++++.|.+|++
T Consensus 237 ~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 237 EQPEAFNAALRDFLR 251 (251)
T ss_pred cChHHHHHHHHHHhC
Confidence 999999999999984
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=3.7e-28 Score=230.81 Aligned_cols=247 Identities=18% Similarity=0.186 Sum_probs=161.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC---CccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN---SITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
.++++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+.. ..++++++++++.+++++++++ +++|+
T Consensus 125 ~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~-~~~Lv 202 (383)
T PLN03084 125 NNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSD-KVSLV 202 (383)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCC-CceEE
Confidence 3568999999999999999999999987 69999999999999987643 2589999999999999999998 99999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhh--cCchHHH-----HHHHHHHHhcCCCCCCCcchhh
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQ--MGSNDLM-----QQAQIFLYANGKQNPPTSIDLD 287 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 287 (394)
|||+||.+++.+|.++|++|+++|+++++...........+... .....+. ......+ .. ..........
T Consensus 203 G~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~-~~--~~~~~~~~e~ 279 (383)
T PLN03084 203 VQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKAL-TS--CGPYAMKEDD 279 (383)
T ss_pred EECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhh-cc--cCccCCCHHH
Confidence 99999999999999999999999999987542211111111000 0000000 0000000 00 0000000111
Q ss_pred HHHHHHHhcccCCchhHH-HHHHhccccCCccccccccc-CCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEE
Q 016141 288 RTLLRDLLFNRSAAKDVE-LALISMRPIPFAPVLEKLSV-SDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFE 365 (394)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~-~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~ 365 (394)
...+...+.......... .....+.. ........+.. .....+++|+|+|+|++|.+++.+..+.+++. .+.++++
T Consensus 280 ~~~~~~~~~~~~~~~~~l~~~~r~~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~v 357 (383)
T PLN03084 280 AMVYRRPYLTSGSSGFALNAISRSMKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIE 357 (383)
T ss_pred HHHHhccccCCcchHHHHHHHHHHhhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEE
Confidence 111111111110000000 00111111 11111111100 00123579999999999999999988888887 4889999
Q ss_pred EcCCCccCcccChHHHHHHHHHHHhh
Q 016141 366 IKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 366 i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
++++||++++|+|+++++.|.+|+.+
T Consensus 358 Ip~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 358 LPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred ECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 99999999999999999999999863
No 19
>PHA02857 monoglyceride lipase; Provisional
Probab=99.96 E-value=4.2e-28 Score=223.07 Aligned_cols=253 Identities=12% Similarity=0.094 Sum_probs=161.2
Q ss_pred CCceeecCCCccCCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHH
Q 016141 124 RPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203 (394)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~ 203 (394)
++..+.+..+.......+.||++||++.++..|..+++.|+++||+|+++|+||||.|+.......++.++++|+..+++
T Consensus 9 ~g~~l~~~~~~~~~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~ 88 (276)
T PHA02857 9 DNDYIYCKYWKPITYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVV 88 (276)
T ss_pred CCCEEEEEeccCCCCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHH
Confidence 34444444444433445678888999999999999999999999999999999999997643334577777888888776
Q ss_pred HhC---CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCC
Q 016141 204 ELG---NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNP 280 (394)
Q Consensus 204 ~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (394)
.+. ...+++|+||||||.+|+.+|.++|+.|+++|+++|............+ ................
T Consensus 89 ~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 159 (276)
T PHA02857 89 TIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLL---------AAKLMGIFYPNKIVGK 159 (276)
T ss_pred HHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHH---------HHHHHHHhCCCCccCC
Confidence 652 1138999999999999999999999999999999986542211111100 0000010100000000
Q ss_pred --CCcchhhHHHHHHHhcccC-----CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHH
Q 016141 281 --PTSIDLDRTLLRDLLFNRS-----AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEA 353 (394)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~ 353 (394)
................... ............. ... ...+..+++|+|+|+|++|.++|++.++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~l~~i~~Pvliv~G~~D~i~~~~~~~~ 230 (276)
T PHA02857 160 LCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKAT-NKV--------RKIIPKIKTPILILQGTNNEISDVSGAYY 230 (276)
T ss_pred CCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHH-HHH--------HHhcccCCCCEEEEecCCCCcCChHHHHH
Confidence 0000000000011111100 0000000000000 000 11233457999999999999999999999
Q ss_pred HHHhC-CCceEEEEcCCCccCcccCh---HHHHHHHHHHHhhhcC
Q 016141 354 MINSN-PPELVFEIKGSDHAPFFSKP---RALHRILVEISKITHR 394 (394)
Q Consensus 354 l~~~~-~~~~~~~i~~agH~~~~e~p---~~v~~~i~~fl~~~~k 394 (394)
+.+.+ +++++++++++||.++.|.+ +++.+.+.+||++..|
T Consensus 231 l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~~~ 275 (276)
T PHA02857 231 FMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNRVK 275 (276)
T ss_pred HHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHHHhcc
Confidence 98876 46899999999999999976 5789999999988653
No 20
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=2.7e-28 Score=232.61 Aligned_cols=244 Identities=18% Similarity=0.181 Sum_probs=154.5
Q ss_pred CceEEEEcCCCCchhcHH--HHHHHH-------HhCCcEEEEecCCCCCCCCCCCCC------ccCHHHHHHHHHHHH-H
Q 016141 140 TSHFVLVHGGGFGAWCWY--KTMTLL-------KESGFKVDAVDLTGSGVSSCDTNS------ITSLEQYVKPLIDTF-N 203 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~--~~~~~l-------~~~g~~v~~~d~~G~G~s~~~~~~------~~~~~~~~~~~~~~l-~ 203 (394)
+|+|||+||++++...|. .+.+.| ...+|+||++|+||||.|+.+... .++++++++++.+++ +
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~ 148 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE 148 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH
Confidence 789999999999988886 555554 134699999999999999765431 478999999988855 8
Q ss_pred HhCCCCcEE-EEEeChHHHHHHHHHHhCCcccceEEEeecccCCCC-cch-H-HH----HHhhcC----c----hHHHHH
Q 016141 204 ELGNEEKVI-LVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSG-QSA-L-DT----ISQQMG----S----NDLMQQ 267 (394)
Q Consensus 204 ~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~-~~~-~-~~----~~~~~~----~----~~~~~~ 267 (394)
+++++ +++ |+||||||++|+.+|.++|++|+++|++++...... ... . .. +..... . ......
T Consensus 149 ~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (360)
T PRK06489 149 GLGVK-HLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKR 227 (360)
T ss_pred hcCCC-ceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 89998 875 899999999999999999999999999987542211 110 0 00 000000 0 000000
Q ss_pred HHHHH-H-hcC-----CCCCCCcchhhHHHHHHHhcccC--CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEE
Q 016141 268 AQIFL-Y-ANG-----KQNPPTSIDLDRTLLRDLLFNRS--AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYI 338 (394)
Q Consensus 268 ~~~~~-~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii 338 (394)
..... . ... ...... .......+...+.... ...............+....+ ..+++|+|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~L--------~~I~~PvLvI 298 (360)
T PRK06489 228 ANPMFAIATSGGTLAYQAQAPT-RAAADKLVDERLAAPVTADANDFLYQWDSSRDYNPSPDL--------EKIKAPVLAI 298 (360)
T ss_pred HHHHHHHHHhCCHHHHHHhcCC-hHHHHHHHHHHHHhhhhcCHHHHHHHHHHhhccChHHHH--------HhCCCCEEEE
Confidence 00000 0 000 000000 0000111111111000 011111111111112222223 3346999999
Q ss_pred ecCCCCCCChHHH--HHHHHhCCCceEEEEcCC----CccCcccChHHHHHHHHHHHhhhcC
Q 016141 339 KTLQDCAIPVSVQ--EAMINSNPPELVFEIKGS----DHAPFFSKPRALHRILVEISKITHR 394 (394)
Q Consensus 339 ~G~~D~~vp~~~~--~~l~~~~~~~~~~~i~~a----gH~~~~e~p~~v~~~i~~fl~~~~k 394 (394)
+|++|.++|++.. +.+.+.+|++++++++++ ||.++ ++|++|++.|.+||+...|
T Consensus 299 ~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 299 NSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred ecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHHHhccc
Confidence 9999999998865 789999999999999996 99997 8999999999999988764
No 21
>PLN02578 hydrolase
Probab=99.96 E-value=4.4e-28 Score=230.51 Aligned_cols=238 Identities=19% Similarity=0.225 Sum_probs=158.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+++++|||+||++++...|..+++.|.+. |+|+++|++|||.|+.+. ..++.+++++++.++++.+..+ +++++|||
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~~-~~v~~~D~~G~G~S~~~~-~~~~~~~~a~~l~~~i~~~~~~-~~~lvG~S 160 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAKK-YKVYALDLLGFGWSDKAL-IEYDAMVWRDQVADFVKEVVKE-PAVLVGNS 160 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhcC-CEEEEECCCCCCCCCCcc-cccCHHHHHHHHHHHHHHhccC-CeEEEEEC
Confidence 45689999999999999999999999874 999999999999998764 4589999999999999999876 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcch--H-------HHHHhhcC--chHHHHHH-HHHHHhc----------
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQSA--L-------DTISQQMG--SNDLMQQA-QIFLYAN---------- 275 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~--~-------~~~~~~~~--~~~~~~~~-~~~~~~~---------- 275 (394)
+||++++.+|.++|++|+++|++++......... . ..+..... ........ ..+.+..
T Consensus 161 ~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (354)
T PLN02578 161 LGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESV 240 (354)
T ss_pred HHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 9999999999999999999999987643211100 0 00000000 00000000 0000000
Q ss_pred ---CCCCCCCcchhhHHHHHHHhcccCCc--hhHHHHH--Hhc---cccCCcccccccccCCCCCCCcCEEEEecCCCCC
Q 016141 276 ---GKQNPPTSIDLDRTLLRDLLFNRSAA--KDVELAL--ISM---RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCA 345 (394)
Q Consensus 276 ---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~---~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~ 345 (394)
....... ................ ....... ..+ ........ +..+++|+++|+|++|.+
T Consensus 241 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~i~~PvLiI~G~~D~~ 309 (354)
T PLN02578 241 LKSVYKDKSN---VDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSL--------LSKLSCPLLLLWGDLDPW 309 (354)
T ss_pred HHHhcCCccc---CCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHH--------hhcCCCCEEEEEeCCCCC
Confidence 0000000 0000111110000000 0000000 000 01111111 234479999999999999
Q ss_pred CChHHHHHHHHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 346 IPVSVQEAMINSNPPELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 346 vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
+|.+..+.+.+.+++.+++++ ++||+++.|+|+++++.|.+|++
T Consensus 310 v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 310 VGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 999999999999999999999 58999999999999999999986
No 22
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.96 E-value=5.7e-28 Score=216.53 Aligned_cols=232 Identities=24% Similarity=0.296 Sum_probs=150.8
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
.|+|||+||++++...|..+++.|.+ +|+|+++|+||||.|... ..++++++++++...+ .+ +++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~--~~~~~~~~~~~~~~~~----~~-~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGF--GPLSLADAAEAIAAQA----PD-PAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCC--CCcCHHHHHHHHHHhC----CC-CeEEEEEcHH
Confidence 37999999999999999999999986 599999999999998654 3467888887776543 24 9999999999
Q ss_pred HHHHHHHHHhCCcccceEEEeecccCCCCcc-h--------HHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHH
Q 016141 220 GACISYVMELFPSKVAKAVFIAATMLTSGQS-A--------LDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTL 290 (394)
Q Consensus 220 g~~a~~~a~~~p~~v~~lVli~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (394)
|.+++.+|.++|++|.++|++++........ + ...+.... ..........+........ ..........
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 153 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQL-SDDYQRTIERFLALQTLGT-PTARQDARAL 153 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHh-hhhHHHHHHHHHHHHHhcC-CccchHHHHH
Confidence 9999999999999999999998765321110 0 00010000 0000001111111000000 0000101111
Q ss_pred HHHHhcccCCc-hhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCC
Q 016141 291 LRDLLFNRSAA-KDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGS 369 (394)
Q Consensus 291 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~a 369 (394)
........... .........+...+.... ...+++|+++|+|++|.++|.+..+.+.+.++++++++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (245)
T TIGR01738 154 KQTLLARPTPNVQVLQAGLEILATVDLRQP--------LQNISVPFLRLYGYLDGLVPAKVVPYLDKLAPHSELYIFAKA 225 (245)
T ss_pred HHHhhccCCCCHHHHHHHHHHhhcccHHHH--------HhcCCCCEEEEeecCCcccCHHHHHHHHHhCCCCeEEEeCCC
Confidence 11111111110 111111111111111112 234469999999999999999999999999999999999999
Q ss_pred CccCcccChHHHHHHHHHHH
Q 016141 370 DHAPFFSKPRALHRILVEIS 389 (394)
Q Consensus 370 gH~~~~e~p~~v~~~i~~fl 389 (394)
||++++|+|+++++.|.+|+
T Consensus 226 gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 226 AHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred CCCccccCHHHHHHHHHhhC
Confidence 99999999999999999996
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.96 E-value=3.8e-28 Score=218.79 Aligned_cols=229 Identities=16% Similarity=0.146 Sum_probs=145.0
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|..+. ..+++++++++.+++++++++ +++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAIS--VDGFADVSRLLSQTLQSYNIL-PYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCcc--ccCHHHHHHHHHHHHHHcCCC-CeEEEEECHH
Confidence 578999999999999999999988 3 5999999999999998654 358999999999999999987 9999999999
Q ss_pred HHHHHHHHHhCCcc-cceEEEeecccCCCCcch-HHHHH------hhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHH
Q 016141 220 GACISYVMELFPSK-VAKAVFIAATMLTSGQSA-LDTIS------QQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLL 291 (394)
Q Consensus 220 g~~a~~~a~~~p~~-v~~lVli~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (394)
|.+|+.+|.++|+. |+++|++++......... ...+. ..............+....... . ..........
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~ 154 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFA-S-LNAEQRQQLV 154 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhh-c-cCccHHHHHH
Confidence 99999999999765 999999987643221110 00000 0000000000000000000000 0 0000000000
Q ss_pred HHHhcccCCchhHHHHHHhc---cccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcC
Q 016141 292 RDLLFNRSAAKDVELALISM---RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKG 368 (394)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~ 368 (394)
.. ... ............. ...+... ....+++|+++|+|++|..+. .+.+. .+++++++++
T Consensus 155 ~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~l~~i~~P~lii~G~~D~~~~-----~~~~~-~~~~~~~i~~ 218 (242)
T PRK11126 155 AK-RSN-NNGAAVAAMLEATSLAKQPDLRP--------ALQALTFPFYYLCGERDSKFQ-----ALAQQ-LALPLHVIPN 218 (242)
T ss_pred Hh-ccc-CCHHHHHHHHHhcCcccCCcHHH--------HhhccCCCeEEEEeCCcchHH-----HHHHH-hcCeEEEeCC
Confidence 00 000 0000000000000 0011111 223457999999999998552 22233 3789999999
Q ss_pred CCccCcccChHHHHHHHHHHHhh
Q 016141 369 SDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 369 agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
+||++++|+|+++++.|.+|+++
T Consensus 219 ~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 219 AGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred CCCchhhhChHHHHHHHHHHHhh
Confidence 99999999999999999999975
No 24
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=3.7e-27 Score=211.19 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=163.0
Q ss_pred cCCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC---CccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 135 IESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN---SITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 135 ~~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
.+...+.++||+||+|.+...|....+.|++ .++|+++|++|+|+|+.+.- .......+++-|+++....|+. +.
T Consensus 85 ~~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~-Km 162 (365)
T KOG4409|consen 85 NESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLE-KM 162 (365)
T ss_pred ccccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCc-ce
Confidence 3446778999999999999999999999999 59999999999999987643 3345668999999999999998 99
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCc-----------chHHHHHhh---cCchHHHHHHHHH------
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQ-----------SALDTISQQ---MGSNDLMQQAQIF------ 271 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~-----------~~~~~~~~~---~~~~~~~~~~~~~------ 271 (394)
+|+|||+||++|..+|.+||++|+.|||++|....... .+...+... ......++....+
T Consensus 163 ilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~ 242 (365)
T KOG4409|consen 163 ILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLALLRLMGPLGPKLVS 242 (365)
T ss_pred eEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHHHHhccccchHHHh
Confidence 99999999999999999999999999999998865421 011000000 0000111111000
Q ss_pred -HHhcCCCCCCCcchhhHHHHHHHhccc----CCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCC
Q 016141 272 -LYANGKQNPPTSIDLDRTLLRDLLFNR----SAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAI 346 (394)
Q Consensus 272 -~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~v 346 (394)
+........+. ....+.+.++++.. ...............+...++++++.. -..+||+++|+|++|.+-
T Consensus 243 ~~~~d~~~k~~~--~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~---l~~~~pv~fiyG~~dWmD 317 (365)
T KOG4409|consen 243 RLRPDRFRKFPS--LIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRE---LKKDVPVTFIYGDRDWMD 317 (365)
T ss_pred hhhHHHHHhccc--cchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHh---hccCCCEEEEecCccccc
Confidence 00000000000 11122222222221 122222222222223333344444321 122599999999999875
Q ss_pred ChHHHHHHHHh--CCCceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 347 PVSVQEAMINS--NPPELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 347 p~~~~~~l~~~--~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
.. ....+.+. ...+++++++++||.+++++|+.|++.|.+++++
T Consensus 318 ~~-~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 318 KN-AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred ch-hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 43 33344442 3358999999999999999999999999999875
No 25
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=1.3e-28 Score=217.71 Aligned_cols=220 Identities=24% Similarity=0.371 Sum_probs=150.7
Q ss_pred EEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
|||+||++++...|..+++.|+ +||+|+++|+||||.|..+.. ..++++++++++.+++++++.+ +++|+|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIK-KVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTS-SEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccc-cccccccccccc
Confidence 7999999999999999999995 689999999999999987653 4689999999999999999997 999999999999
Q ss_pred HHHHHHHhCCcccceEEEeecccCCCCcc---hHHHHHh-hcCch-HHHHHHH-HHHHhcCCCCCCCcchhhHHHHHHHh
Q 016141 222 CISYVMELFPSKVAKAVFIAATMLTSGQS---ALDTISQ-QMGSN-DLMQQAQ-IFLYANGKQNPPTSIDLDRTLLRDLL 295 (394)
Q Consensus 222 ~a~~~a~~~p~~v~~lVli~~~~~~~~~~---~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (394)
+++.++.++|++|+++|++++........ ....+.. ..... ....... ..+.. ...........
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~ 148 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYR----------WFDGDEPEDLI 148 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHTHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccc----------ccccccccccc
Confidence 99999999999999999999987432110 0001111 00000 0000000 00000 00000011111
Q ss_pred cccCCchhHHHHHHh-ccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCc
Q 016141 296 FNRSAAKDVELALIS-MRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374 (394)
Q Consensus 296 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~ 374 (394)
.. ........... ....+....+..+ ++|+++++|++|.+++.+..+.+.+.++++++++++++||+++
T Consensus 149 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 149 RS--SRRALAEYLRSNLWQADLSEALPRI--------KVPVLVIHGEDDPIVPPESAEELADKLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHGS--------SSEEEEEEETTSSSSHHHHHHHHHHHSTTEEEEEETTSSSTHH
T ss_pred cc--ccccccccccccccccccccccccc--------CCCeEEeecCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCccH
Confidence 00 00000000000 0011111223333 5999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHH
Q 016141 375 FSKPRALHRI 384 (394)
Q Consensus 375 ~e~p~~v~~~ 384 (394)
+|+|++|++.
T Consensus 219 ~~~p~~~~~a 228 (228)
T PF12697_consen 219 LEQPDEVAEA 228 (228)
T ss_dssp HHSHHHHHHH
T ss_pred HHCHHHHhcC
Confidence 9999999874
No 26
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.96 E-value=8.1e-27 Score=214.37 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=152.4
Q ss_pred CCceEEEEcCCCCchh-cHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCC--ccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 139 ETSHFVLVHGGGFGAW-CWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNS--ITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
.+++|||+||++++.. .|..+...|.+.||+|+++|+||||.|..+... .++++++++++.+++++++.+ +++++|
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~liG 102 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLD-KFYLLG 102 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 4689999999866554 455666666666899999999999999865433 378999999999999999987 899999
Q ss_pred eChHHHHHHHHHHhCCcccceEEEeecccCCCCcch-HHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHH
Q 016141 216 HDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA-LDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDL 294 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (394)
|||||.+++.+|.++|++|+++|++++......... ......... ........... .....................
T Consensus 103 ~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 180 (288)
T TIGR01250 103 HSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLRKELP-PEVRAAIKRCE-ASGDYDNPEYQEAVEVFYHHL 180 (288)
T ss_pred eehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHHhhcC-hhHHHHHHHHH-hccCcchHHHHHHHHHHHHHh
Confidence 999999999999999999999999987653221100 000000000 00000000000 000000000000000000000
Q ss_pred hcccCCchh-HHHHHH--------hc-cccCCc--ccccccc-cCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCc
Q 016141 295 LFNRSAAKD-VELALI--------SM-RPIPFA--PVLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPE 361 (394)
Q Consensus 295 ~~~~~~~~~-~~~~~~--------~~-~~~~~~--~~~~~i~-~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~ 361 (394)
......... ...... .+ ....+. ..+.... ...+..+++|+++++|++|.+ +++..+.+.+.+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~ 259 (288)
T TIGR01250 181 LCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGS 259 (288)
T ss_pred hcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCC
Confidence 000000000 000000 00 000000 0000000 112345679999999999985 667888899999999
Q ss_pred eEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 362 LVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 362 ~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
++++++++||++++|+|+++++.|.+||+
T Consensus 260 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 260 RLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred eEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999984
No 27
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=3.3e-28 Score=226.29 Aligned_cols=247 Identities=20% Similarity=0.292 Sum_probs=162.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhC-CcEEEEecCCCCC-CCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKES-GFKVDAVDLTGSG-VSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G-~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
.++++||++|||+++...|+.++..|.++ |+.|+++|++||| .|..+....++..++++.+..+..+.+.. +++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~-~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVE-PVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCc-ceEEEE
Confidence 57899999999999999999999999876 6999999999999 55556666799999999999999999887 899999
Q ss_pred eChHHHHHHHHHHhCCcccceEE---EeecccCCCCcchHH---HHHhhcCchHHHH----HHHHHHHhcCCCCCC----
Q 016141 216 HDFGGACISYVMELFPSKVAKAV---FIAATMLTSGQSALD---TISQQMGSNDLMQ----QAQIFLYANGKQNPP---- 281 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~~v~~lV---li~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~---- 281 (394)
||+||.+|+.+|+.+|+.|+++| ++++........... .+........... ......+........
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY 214 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeec
Confidence 99999999999999999999999 555554432221111 1110000000000 000000000000000
Q ss_pred CcchhhHHHHHHHhcccCCchhHHHHHHhccccCCccccc------ccccCCCCCC-CcCEEEEecCCCCCCChHHHHHH
Q 016141 282 TSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLE------KLSVSDDNYG-SVPRFYIKTLQDCAIPVSVQEAM 354 (394)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~i~~~~~~~~-~~PvLii~G~~D~~vp~~~~~~l 354 (394)
.................. ..... ...+..+.. .........+ ++|+|++||++|.++|.+.+..+
T Consensus 215 ~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~ 286 (326)
T KOG1454|consen 215 TDPSRLLEKLLHLLSRPV---KEHFH-----RDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEEL 286 (326)
T ss_pred cccccchhhhhhheeccc---ccchh-----hhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHH
Confidence 000000001111100000 00000 000000000 1111112233 49999999999999999999999
Q ss_pred HHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhhhc
Q 016141 355 INSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKITH 393 (394)
Q Consensus 355 ~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~~ 393 (394)
.+.++++++++++++||.+++|.|+++++.|..|++.+.
T Consensus 287 ~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~~ 325 (326)
T KOG1454|consen 287 KKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFIARLR 325 (326)
T ss_pred HhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999998764
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=9.6e-28 Score=229.37 Aligned_cols=241 Identities=16% Similarity=0.201 Sum_probs=155.0
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC---CcEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE---EKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~lv 214 (394)
..+++|||+||++++...|..++..|+++||+|+++|++|||.|+.......+++.+++|+..+++.+... .+++|+
T Consensus 134 ~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv 213 (395)
T PLN02652 134 EMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLF 213 (395)
T ss_pred CCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 34579999999999999999999999999999999999999999876544568899999999999887522 379999
Q ss_pred EeChHHHHHHHHHHhCCc---ccceEEEeecccCCCCcch-HHHHHhhcCchHHHHHHH-HHHHhcCCCCCCCcchhhHH
Q 016141 215 GHDFGGACISYVMELFPS---KVAKAVFIAATMLTSGQSA-LDTISQQMGSNDLMQQAQ-IFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~---~v~~lVli~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 289 (394)
||||||.+++.++. +|+ +|.++|+.+|......... ...+ ..+..... .+.+...... .........
T Consensus 214 GhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~------~~l~~~~~p~~~~~~~~~~-~~~~s~~~~ 285 (395)
T PLN02652 214 GHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAV------APIFSLVAPRFQFKGANKR-GIPVSRDPA 285 (395)
T ss_pred EECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHH------HHHHHHhCCCCcccCcccc-cCCcCCCHH
Confidence 99999999998775 664 7999999988753221110 0000 00000000 0000000000 000000011
Q ss_pred HHHHHhcccCC---chhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--CceEE
Q 016141 290 LLRDLLFNRSA---AKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--PELVF 364 (394)
Q Consensus 290 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~ 364 (394)
.....+..... ............ ....+ ...+..+++|+|+++|++|.++|++.++.+.+.++ +.+++
T Consensus 286 ~~~~~~~dp~~~~g~i~~~~~~~~~~------~~~~l-~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~ 358 (395)
T PLN02652 286 ALLAKYSDPLVYTGPIRVRTGHEILR------ISSYL-TRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIK 358 (395)
T ss_pred HHHHHhcCCCcccCCchHHHHHHHHH------HHHHH-HhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEE
Confidence 11111110000 000000000000 00000 11233457999999999999999999999988765 47899
Q ss_pred EEcCCCccCccc-ChHHHHHHHHHHHhhhc
Q 016141 365 EIKGSDHAPFFS-KPRALHRILVEISKITH 393 (394)
Q Consensus 365 ~i~~agH~~~~e-~p~~v~~~i~~fl~~~~ 393 (394)
++++++|.+++| +++++.+.|.+||+.+.
T Consensus 359 ~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~ 388 (395)
T PLN02652 359 LYDGFLHDLLFEPEREEVGRDIIDWMEKRL 388 (395)
T ss_pred EECCCeEEeccCCCHHHHHHHHHHHHHHHh
Confidence 999999999887 79999999999998753
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=7.7e-27 Score=219.94 Aligned_cols=244 Identities=15% Similarity=0.155 Sum_probs=154.6
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-----CccCHHHHHHHHHHHHHHh----CCC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-----SITSLEQYVKPLIDTFNEL----GNE 208 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~l~~l----~~~ 208 (394)
..+++|||+||++.+...|..++..|.+.||+|+++|+||||.|+.+.. ...+++++++|+..+++.+ +..
T Consensus 52 ~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 131 (330)
T PRK10749 52 HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYR 131 (330)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCC
Confidence 3457999999999999999999999999999999999999999975422 2358999999999999886 445
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHH--Hhc--CCCCC-CCc
Q 016141 209 EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFL--YAN--GKQNP-PTS 283 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~-~~~ 283 (394)
+++++||||||.+++.++.++|+.|+++|+++|................. .......... +.. ..... ...
T Consensus 132 -~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (330)
T PRK10749 132 -KRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRIL---NWAEGHPRIRDGYAIGTGRWRPLPFA 207 (330)
T ss_pred -CeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHH---HHHHHhcCCCCcCCCCCCCCCCCCcC
Confidence 89999999999999999999999999999999864321110000000000 0000000000 000 00000 000
Q ss_pred c---hhhHHH---HHHHhcccCCc----hhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHH
Q 016141 284 I---DLDRTL---LRDLLFNRSAA----KDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEA 353 (394)
Q Consensus 284 ~---~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~ 353 (394)
. ...... ..+.+...... ....+....+.. ... .......+++|+|+|+|++|.+++++..+.
T Consensus 208 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~ 280 (330)
T PRK10749 208 INVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA------GEQ-VLAGAGDITTPLLLLQAEEERVVDNRMHDR 280 (330)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH------HHH-HHhhccCCCCCEEEEEeCCCeeeCHHHHHH
Confidence 0 000100 11111111100 000000000000 000 011223446999999999999999998888
Q ss_pred HHHhC-------CCceEEEEcCCCccCcccCh---HHHHHHHHHHHhhh
Q 016141 354 MINSN-------PPELVFEIKGSDHAPFFSKP---RALHRILVEISKIT 392 (394)
Q Consensus 354 l~~~~-------~~~~~~~i~~agH~~~~e~p---~~v~~~i~~fl~~~ 392 (394)
+.+.+ +++++++++|+||.++.|.+ +.+.+.|.+||+++
T Consensus 281 ~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 281 FCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred HHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 87765 34689999999999999875 67889999999875
No 30
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=3.9e-27 Score=222.26 Aligned_cols=240 Identities=18% Similarity=0.219 Sum_probs=151.7
Q ss_pred CCceEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCC-----CCcEE
Q 016141 139 ETSHFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN-----EEKVI 212 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~-----~~~~~ 212 (394)
.+++|||+||++.+. ..|..++..|+++||+|+++|+||||.|........+++++++|+.++++.+.. ..+++
T Consensus 58 ~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~ 137 (330)
T PLN02298 58 PRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRF 137 (330)
T ss_pred CceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEE
Confidence 456799999998664 356777888999999999999999999975544456899999999999998753 13799
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcch----h-h
Q 016141 213 LVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSID----L-D 287 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 287 (394)
|+||||||.+++.++.++|++|+++|++++............. ..........+.............. . .
T Consensus 138 l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (330)
T PLN02298 138 LYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWP-----IPQILTFVARFLPTLAIVPTADLLEKSVKVPA 212 (330)
T ss_pred EEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchH-----HHHHHHHHHHHCCCCccccCCCcccccccCHH
Confidence 9999999999999999999999999999986532211000000 0000000000000000000000000 0 0
Q ss_pred HHHHHHH---hcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--Cce
Q 016141 288 RTLLRDL---LFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--PEL 362 (394)
Q Consensus 288 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~ 362 (394)
...+... .+.............. .. .. ....+..+++|+|+|+|++|.++|++..+.+.+.++ +++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~-~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~ 283 (330)
T PLN02298 213 KKIIAKRNPMRYNGKPRLGTVVELLR--VT------DY-LGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKT 283 (330)
T ss_pred HHHHHHhCccccCCCccHHHHHHHHH--HH------HH-HHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCce
Confidence 0000000 0000000000000000 00 00 011223446999999999999999999999888764 789
Q ss_pred EEEEcCCCccCcccChH----HHHHHHHHHHhhh
Q 016141 363 VFEIKGSDHAPFFSKPR----ALHRILVEISKIT 392 (394)
Q Consensus 363 ~~~i~~agH~~~~e~p~----~v~~~i~~fl~~~ 392 (394)
+++++++||.+++++|+ .+.+.|.+||.++
T Consensus 284 l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 284 IKIYDGMMHSLLFGEPDENIEIVRRDILSWLNER 317 (330)
T ss_pred EEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999885 4677888998765
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=1.6e-26 Score=207.30 Aligned_cols=242 Identities=17% Similarity=0.203 Sum_probs=154.0
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHH-HHHHHHHhCCCCcEEEEEeC
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKP-LIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~-~~~~l~~l~~~~~~~lvGhS 217 (394)
+|+|||+||++++...|..+++.|+ .||+|+++|+||||.|..+.. ...++++++++ +..+++.++.+ +++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIE-PFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCC-eEEEEEec
Confidence 4789999999999999999999998 689999999999999976543 46788999999 77888888877 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCcch-HHHHHhhcCchHHH-----HHHHHHHHhcC-CCCCCCcchhhHHH
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQSA-LDTISQQMGSNDLM-----QQAQIFLYANG-KQNPPTSIDLDRTL 290 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~ 290 (394)
+||.+++.+|.++|+.|.++|++++......... .............+ ........... ..............
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 9999999999999999999999998643221110 00000000000000 00000000000 00000000000000
Q ss_pred HHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCC
Q 016141 291 LRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD 370 (394)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~ag 370 (394)
+......... ................... .....+++|+++|+|++|..++ +..+.+.+..++.++++++++|
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~g 231 (251)
T TIGR03695 159 LRAKRLANNP-EGLAKMLRATGLGKQPSLW-----PKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPNLTLVIIANAG 231 (251)
T ss_pred HHHhcccccc-hHHHHHHHHhhhhcccchH-----HHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCCCCcEEEEcCCC
Confidence 1110000000 0000000000000000000 1123346999999999998764 5677788888999999999999
Q ss_pred ccCcccChHHHHHHHHHHHh
Q 016141 371 HAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 371 H~~~~e~p~~v~~~i~~fl~ 390 (394)
|++++|+|+++++.|.+|++
T Consensus 232 H~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 232 HNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred CCcCccChHHHHHHHHHHhC
Confidence 99999999999999999984
No 32
>PRK07581 hypothetical protein; Validated
Probab=99.95 E-value=7.1e-27 Score=221.30 Aligned_cols=251 Identities=14% Similarity=0.035 Sum_probs=147.8
Q ss_pred CceEEEEcCCCCchhcHHHHH---HHHHhCCcEEEEecCCCCCCCCCCCC--CccCHHH-----HHHHHHH----HHHHh
Q 016141 140 TSHFVLVHGGGFGAWCWYKTM---TLLKESGFKVDAVDLTGSGVSSCDTN--SITSLEQ-----YVKPLID----TFNEL 205 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~-----~~~~~~~----~l~~l 205 (394)
.|+||++||++++...|..++ +.|...+|+||++|+||||.|+.+.. ..+++++ +++++.+ +++++
T Consensus 41 ~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 120 (339)
T PRK07581 41 DNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKF 120 (339)
T ss_pred CCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHh
Confidence 356777777777766676543 36665579999999999999975532 1234332 4555544 77889
Q ss_pred CCCCc-EEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcch--HHHHH----hhcCc---------hHHHHH--
Q 016141 206 GNEEK-VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA--LDTIS----QQMGS---------NDLMQQ-- 267 (394)
Q Consensus 206 ~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~--~~~~~----~~~~~---------~~~~~~-- 267 (394)
+++ + ++||||||||++|+.+|.++|++|+++|++++......... ..... ..... ......
T Consensus 121 gi~-~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 199 (339)
T PRK07581 121 GIE-RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHA 199 (339)
T ss_pred CCC-ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHH
Confidence 998 8 58999999999999999999999999999987654221100 00000 00000 000000
Q ss_pred --HH------HHHHhcCCCCCCC--cchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccc--cccccCCCCCCCcCE
Q 016141 268 --AQ------IFLYANGKQNPPT--SIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVL--EKLSVSDDNYGSVPR 335 (394)
Q Consensus 268 --~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~~~~~~Pv 335 (394)
.. .+........... .................. .........+......... .......+..+++||
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~Pt 278 (339)
T PRK07581 200 RVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDP-NNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKT 278 (339)
T ss_pred HHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCc-ccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCE
Confidence 00 0000000000000 000001111111111111 1111110001000000000 000011223457999
Q ss_pred EEEecCCCCCCChHHHHHHHHhCCCceEEEEcC-CCccCcccChHHHHHHHHHHHhhh
Q 016141 336 FYIKTLQDCAIPVSVQEAMINSNPPELVFEIKG-SDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 336 Lii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~-agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
|+|+|++|.++|++..+.+.+.+++++++++++ +||++++++|+++++.|.+||++-
T Consensus 279 LvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 279 FVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999999863
No 33
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.4e-25 Score=215.97 Aligned_cols=245 Identities=16% Similarity=0.248 Sum_probs=149.1
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccC----HHHHHHHHHHHHHHhCCCCcEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITS----LEQYVKPLIDTFNELGNEEKVIL 213 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~----~~~~~~~~~~~l~~l~~~~~~~l 213 (394)
+++|+|||+||++.+...|...+..|.+. |+|+++|+||||.|+.+.....+ .+.+++++.++++.++++ +++|
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~~-~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~-~~~l 180 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLS-NFIL 180 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHhC-CEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCC-CeEE
Confidence 46789999999999999999889999875 99999999999999765422122 224567888888889888 9999
Q ss_pred EEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchH-HHHHhhcC-c---------------hHHHHH--------H
Q 016141 214 VGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSAL-DTISQQMG-S---------------NDLMQQ--------A 268 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~-~~~~~~~~-~---------------~~~~~~--------~ 268 (394)
+||||||++|+.+|.++|++|+++|++++.......... ..+..... . ....+. .
T Consensus 181 vGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~ 260 (402)
T PLN02894 181 LGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLV 260 (402)
T ss_pred EEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHH
Confidence 999999999999999999999999999987643321111 00000000 0 000000 0
Q ss_pred HHHH---HhcCCCCCCCcchhhHHHHHHHhcc---cCCchhHHHHHHhccccCCcccccccc-cCCCCCCCcCEEEEecC
Q 016141 269 QIFL---YANGKQNPPTSIDLDRTLLRDLLFN---RSAAKDVELALISMRPIPFAPVLEKLS-VSDDNYGSVPRFYIKTL 341 (394)
Q Consensus 269 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~PvLii~G~ 341 (394)
..+. +........ ........+.+.++. ........... +.... .+.... ...+..+++|+++|+|+
T Consensus 261 ~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~l~~I~vP~liI~G~ 334 (402)
T PLN02894 261 RRYTTARFGAHSTGDI-LSEEESKLLTDYVYHTLAAKASGELCLKY--IFSFG---AFARKPLLESASEWKVPTTFIYGR 334 (402)
T ss_pred HHHHHHHhhhcccccc-cCcchhhHHHHHHHHhhcCCCchHHHHHH--hccCc---hhhcchHhhhcccCCCCEEEEEeC
Confidence 0000 000000000 000000111111110 00000000000 00000 000000 11233457999999999
Q ss_pred CCCCCChHHHHHHHHhC-CCceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 342 QDCAIPVSVQEAMINSN-PPELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 342 ~D~~vp~~~~~~l~~~~-~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
+|.+.+ .....+.+.. +++++++++++||++++|+|++|++.|.+|++.
T Consensus 335 ~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 335 HDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred CCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 998776 4444555544 458999999999999999999999999988864
No 34
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=7.2e-27 Score=221.40 Aligned_cols=240 Identities=15% Similarity=0.144 Sum_probs=148.3
Q ss_pred CceEEEEcCCCCchh------------cHHHHHH---HHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Q 016141 140 TSHFVLVHGGGFGAW------------CWYKTMT---LLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~------------~~~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~ 204 (394)
++++||+||++++.. .|..++. .|...+|+||++|+||||.|.. ..++++++++|+.+++++
T Consensus 57 ~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~---~~~~~~~~a~dl~~ll~~ 133 (343)
T PRK08775 57 GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLD---VPIDTADQADAIALLLDA 133 (343)
T ss_pred CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCC---CCCCHHHHHHHHHHHHHH
Confidence 445777766666655 6888875 5643369999999999998842 346889999999999999
Q ss_pred hCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcc--hHHHHHh---hcC----chHHHHHHHHHHHh-
Q 016141 205 LGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS--ALDTISQ---QMG----SNDLMQQAQIFLYA- 274 (394)
Q Consensus 205 l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~--~~~~~~~---~~~----~~~~~~~~~~~~~~- 274 (394)
+++++.++|+||||||++|+.+|.++|++|.++|++++........ +...... ... ..............
T Consensus 134 l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (343)
T PRK08775 134 LGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLS 213 (343)
T ss_pred cCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHH
Confidence 9997245799999999999999999999999999999865322110 0000000 000 00000000000000
Q ss_pred --------cCCCCCCC-----cchhhHHHHHH---HhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEE
Q 016141 275 --------NGKQNPPT-----SIDLDRTLLRD---LLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYI 338 (394)
Q Consensus 275 --------~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii 338 (394)
........ ........+.. .................. +. .......+++|+|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~~~l~~I~~PtLvi 283 (343)
T PRK08775 214 YRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESI---DL-------HRVDPEAIRVPTVVV 283 (343)
T ss_pred cCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHH---hh-------cCCChhcCCCCeEEE
Confidence 00000000 00000000000 000000000000000000 00 001123457999999
Q ss_pred ecCCCCCCChHHHHHHHHhC-CCceEEEEcC-CCccCcccChHHHHHHHHHHHhhh
Q 016141 339 KTLQDCAIPVSVQEAMINSN-PPELVFEIKG-SDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 339 ~G~~D~~vp~~~~~~l~~~~-~~~~~~~i~~-agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
+|++|.++|++..+.+.+.+ ++++++++++ +||++++|+|++|++.|.+||++-
T Consensus 284 ~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 284 AVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred EeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 99999999999888888877 6899999985 999999999999999999999753
No 35
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.94 E-value=5.4e-26 Score=216.10 Aligned_cols=249 Identities=12% Similarity=0.105 Sum_probs=152.2
Q ss_pred CCceEEEEcCCCCchh-----------cHHHHH---HHHHhCCcEEEEecCCC--CCCCCCC----C-------CCccCH
Q 016141 139 ETSHFVLVHGGGFGAW-----------CWYKTM---TLLKESGFKVDAVDLTG--SGVSSCD----T-------NSITSL 191 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~-----------~~~~~~---~~l~~~g~~v~~~d~~G--~G~s~~~----~-------~~~~~~ 191 (394)
.+++|||+||++++.. .|..++ ..|...+|+|+++|+|| ||.|... . ...+++
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 3579999999999763 377775 25555679999999999 5555321 1 124789
Q ss_pred HHHHHHHHHHHHHhCCCCc-EEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcc--hHHH----HHhhcCc---
Q 016141 192 EQYVKPLIDTFNELGNEEK-VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS--ALDT----ISQQMGS--- 261 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~--~~~~----~~~~~~~--- 261 (394)
+++++++.+++++++++ + ++|+||||||++++.+|.++|++|+++|++++........ +... +......
T Consensus 110 ~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 188 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDG 188 (351)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999998 7 9999999999999999999999999999999876433211 1110 0000000
Q ss_pred -------h-HHHHHHHHHHH----------hcCCCCCCCc-------------chhhHHHHHHHhcccCCchhHHHHHHh
Q 016141 262 -------N-DLMQQAQIFLY----------ANGKQNPPTS-------------IDLDRTLLRDLLFNRSAAKDVELALIS 310 (394)
Q Consensus 262 -------~-~~~~~~~~~~~----------~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
. ........... .......... ..+........... ............
T Consensus 189 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~ 267 (351)
T TIGR01392 189 DYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDR-FDANSYLYLTRA 267 (351)
T ss_pred CCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhh-cCcchHHHHHHH
Confidence 0 00000000000 0000000000 00000000011111 111111111111
Q ss_pred ccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEE-----EEcCCCccCcccChHHHHHHH
Q 016141 311 MRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVF-----EIKGSDHAPFFSKPRALHRIL 385 (394)
Q Consensus 311 ~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~-----~i~~agH~~~~e~p~~v~~~i 385 (394)
+...+....... ....+..+++|+|+|+|++|.++|++..+.+++.+++.+++ +++++||++++|+|++|++.|
T Consensus 268 l~~~d~~~~~~~-~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l 346 (351)
T TIGR01392 268 LDTHDLGRGRGS-LTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEELI 346 (351)
T ss_pred HHhcCCcCCCCC-HHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHHH
Confidence 111111000000 01123344699999999999999999999999999988765 567899999999999999999
Q ss_pred HHHHh
Q 016141 386 VEISK 390 (394)
Q Consensus 386 ~~fl~ 390 (394)
.+||+
T Consensus 347 ~~FL~ 351 (351)
T TIGR01392 347 RGFLR 351 (351)
T ss_pred HHHhC
Confidence 99984
No 36
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.94 E-value=1.2e-25 Score=215.43 Aligned_cols=246 Identities=15% Similarity=0.160 Sum_probs=153.6
Q ss_pred CCceEEEEcCCCCchhc-------------HHHHHH---HHHhCCcEEEEecCCCC-CCCCCCCC-------------Cc
Q 016141 139 ETSHFVLVHGGGFGAWC-------------WYKTMT---LLKESGFKVDAVDLTGS-GVSSCDTN-------------SI 188 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~-------------~~~~~~---~l~~~g~~v~~~d~~G~-G~s~~~~~-------------~~ 188 (394)
.+|+|||+||++++... |..++. .|...+|+||++|++|+ |.|+.+.. ..
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 36899999999999975 566652 34344699999999983 54433210 15
Q ss_pred cCHHHHHHHHHHHHHHhCCCCc-EEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcc--hHH----HHHhhcC-
Q 016141 189 TSLEQYVKPLIDTFNELGNEEK-VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS--ALD----TISQQMG- 260 (394)
Q Consensus 189 ~~~~~~~~~~~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~--~~~----~~~~~~~- 260 (394)
++++++++++.+++++++++ + ++|+||||||++++.+|.++|++|+++|++++........ +.. .+.....
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 205 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDW 205 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCC
Confidence 79999999999999999998 7 5999999999999999999999999999999876432211 111 1110000
Q ss_pred ---------chHH--HHHHH-----------HH--HHhcCCCCCCC-----cchhhHHHHH---HHhcccCCchhHHHHH
Q 016141 261 ---------SNDL--MQQAQ-----------IF--LYANGKQNPPT-----SIDLDRTLLR---DLLFNRSAAKDVELAL 308 (394)
Q Consensus 261 ---------~~~~--~~~~~-----------~~--~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~ 308 (394)
.... ..... .+ .+......... .......+.. ..+.............
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0000 00000 00 00000000000 0000000000 0011111111111111
Q ss_pred HhccccC--------CcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCc----eEEEEc-CCCccCcc
Q 016141 309 ISMRPIP--------FAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPE----LVFEIK-GSDHAPFF 375 (394)
Q Consensus 309 ~~~~~~~--------~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~----~~~~i~-~agH~~~~ 375 (394)
..+...+ +...+ ..+++|+|+|+|++|.++|++..+.+++.++++ ++++++ ++||++++
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l--------~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~l 357 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAAL--------ARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFL 357 (379)
T ss_pred HHHHhccccCCCCCCHHHHH--------hcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHh
Confidence 1111111 12222 344699999999999999999999999999887 777775 89999999
Q ss_pred cChHHHHHHHHHHHhhhc
Q 016141 376 SKPRALHRILVEISKITH 393 (394)
Q Consensus 376 e~p~~v~~~i~~fl~~~~ 393 (394)
|+|++|++.|.+||++..
T Consensus 358 e~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 358 LDDPRYGRLVRAFLERAA 375 (379)
T ss_pred cCHHHHHHHHHHHHHhhh
Confidence 999999999999998753
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.94 E-value=2.6e-25 Score=213.19 Aligned_cols=233 Identities=24% Similarity=0.325 Sum_probs=155.0
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+++++|||+||++++...|..++..|.+. |+|+++|+||||.|.... ...+++++++++..+++.++.. +++|+|||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~G~s~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~lvG~S 205 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAAG-RPVIALDLPGHGASSKAV-GAGSLDELAAAVLAFLDALGIE-RAHLVGHS 205 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhcC-CEEEEEcCCCCCCCCCCC-CCCCHHHHHHHHHHHHHhcCCc-cEEEEeec
Confidence 45789999999999999999999999875 999999999999996443 4578999999999999999987 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCCc--chHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHh
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSGQ--SALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLL 295 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (394)
+||.+++.+|..+|+++.++|++++....... .+...+........+...... ... ... ..........+
T Consensus 206 ~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~---~~~~~~~~~~~ 277 (371)
T PRK14875 206 MGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLEL-LFA----DPA---LVTRQMVEDLL 277 (371)
T ss_pred hHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHH-Hhc----Chh---hCCHHHHHHHH
Confidence 99999999999999999999999886432211 111111111111111111111 000 000 00111111111
Q ss_pred ccc--CCchhH-HHHHHh-ccc----cCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEc
Q 016141 296 FNR--SAAKDV-ELALIS-MRP----IPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIK 367 (394)
Q Consensus 296 ~~~--~~~~~~-~~~~~~-~~~----~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~ 367 (394)
... ...... ...... +.. .++... ...+++|+|+++|++|.++|.+..+.+ ..+.++.+++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~ 346 (371)
T PRK14875 278 KYKRLDGVDDALRALADALFAGGRQRVDLRDR--------LASLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLP 346 (371)
T ss_pred HHhccccHHHHHHHHHHHhccCcccchhHHHH--------HhcCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeC
Confidence 000 000000 000000 000 111111 223469999999999999998766543 3468999999
Q ss_pred CCCccCcccChHHHHHHHHHHHhhh
Q 016141 368 GSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 368 ~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
++||++++++|+++++.|.+|++++
T Consensus 347 ~~gH~~~~e~p~~~~~~i~~fl~~~ 371 (371)
T PRK14875 347 GAGHMPQMEAAADVNRLLAEFLGKA 371 (371)
T ss_pred CCCCChhhhCHHHHHHHHHHHhccC
Confidence 9999999999999999999999763
No 38
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.94 E-value=3.4e-25 Score=204.12 Aligned_cols=261 Identities=16% Similarity=0.150 Sum_probs=166.7
Q ss_pred ceeecCCCccCCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCC-CCCCCccCHHHHHHHHHHHHHH
Q 016141 126 HQLVNQEPKIESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS-CDTNSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 126 ~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~-~~~~~~~~~~~~~~~~~~~l~~ 204 (394)
..+.+..+........+||++||++.+..-|..++..|...||.|+++|+||||.|. +......+++++.+|+..+++.
T Consensus 20 ~~~~~~~~~~~~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~ 99 (298)
T COG2267 20 TRLRYRTWAAPEPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVET 99 (298)
T ss_pred ceEEEEeecCCCCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHH
Confidence 333333333333444799999999999999999999999999999999999999998 5555666799999999999988
Q ss_pred hC---CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhc--CCCC
Q 016141 205 LG---NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYAN--GKQN 279 (394)
Q Consensus 205 l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 279 (394)
.. .+.+++|+||||||.+++.++.+++.+|+++||.+|............+.... ...+.+....+.... ....
T Consensus 100 ~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~ 178 (298)
T COG2267 100 IAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLA-LKLLGRIRPKLPVDSNLLEGV 178 (298)
T ss_pred HhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHh-cccccccccccccCcccccCc
Confidence 75 34699999999999999999999999999999999987654300000000000 000000000000000 0000
Q ss_pred CCCcchhhHHHHHHHhcccC---CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCC-hHHHHHHH
Q 016141 280 PPTSIDLDRTLLRDLLFNRS---AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIP-VSVQEAMI 355 (394)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp-~~~~~~l~ 355 (394)
......-+......+..+.. ......+....+.... .........+++|+|+++|++|.+++ .+....+.
T Consensus 179 ~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~------~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~ 252 (298)
T COG2267 179 LTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR------VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFF 252 (298)
T ss_pred CcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc------ccchhccccccCCEEEEecCCCccccCcHHHHHHH
Confidence 00011111122222111110 0011111111111110 01111233447999999999999999 67777666
Q ss_pred HhC--CCceEEEEcCCCccCcccC-h--HHHHHHHHHHHhhhc
Q 016141 356 NSN--PPELVFEIKGSDHAPFFSK-P--RALHRILVEISKITH 393 (394)
Q Consensus 356 ~~~--~~~~~~~i~~agH~~~~e~-p--~~v~~~i~~fl~~~~ 393 (394)
+.. +++++++++|+.|.++.|. . +++.+.+.+|+.++.
T Consensus 253 ~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 253 ERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred HhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 654 5688999999999999885 5 789999999998764
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.93 E-value=1.3e-24 Score=191.35 Aligned_cols=254 Identities=18% Similarity=0.165 Sum_probs=164.6
Q ss_pred CceeecCCCccCC--CCCceEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHH
Q 016141 125 PHQLVNQEPKIES--PETSHFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201 (394)
Q Consensus 125 ~~~~~~~~~~~~~--~~~~~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 201 (394)
+..+.+..+.... .....|+++||++... ..|..++..|+..||.|+++|++|||.|++......+++..++|+..+
T Consensus 37 G~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~ 116 (313)
T KOG1455|consen 37 GAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISF 116 (313)
T ss_pred CCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHH
Confidence 3344444443322 3445899999998876 778899999999999999999999999998888888999999999999
Q ss_pred HHHhC-----CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcC
Q 016141 202 FNELG-----NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANG 276 (394)
Q Consensus 202 l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (394)
++... .+.+.+|+||||||++++.++.++|+..+|+|+++|............+... +.. ....+....
T Consensus 117 ~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~-----~l~-~l~~liP~w 190 (313)
T KOG1455|consen 117 FDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS-----ILT-LLSKLIPTW 190 (313)
T ss_pred HHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH-----HHH-HHHHhCCce
Confidence 98642 2248999999999999999999999999999999997654322110000000 000 000000000
Q ss_pred CCCCC---CcchhhHHHHHHHhcccC----CchhHHHHHHhc-cccCCcccccccccCCCCCCCcCEEEEecCCCCCCCh
Q 016141 277 KQNPP---TSIDLDRTLLRDLLFNRS----AAKDVELALISM-RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPV 348 (394)
Q Consensus 277 ~~~~~---~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~ 348 (394)
...+. ....+.....+....... ...........+ ...+.... +..+++|.+|+||++|.++.+
T Consensus 191 k~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~--------l~~vtvPflilHG~dD~VTDp 262 (313)
T KOG1455|consen 191 KIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKN--------LNEVTVPFLILHGTDDKVTDP 262 (313)
T ss_pred eecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHh--------cccccccEEEEecCCCcccCc
Confidence 00000 000001111111111111 011111111111 11112222 233469999999999999999
Q ss_pred HHHHHHHHhCC--CceEEEEcCCCccCcc-c---ChHHHHHHHHHHHhhh
Q 016141 349 SVQEAMINSNP--PELVFEIKGSDHAPFF-S---KPRALHRILVEISKIT 392 (394)
Q Consensus 349 ~~~~~l~~~~~--~~~~~~i~~agH~~~~-e---~p~~v~~~i~~fl~~~ 392 (394)
+.++.+.+..+ +.++.+|||.-|.++. | +-+.|...|.+||+++
T Consensus 263 ~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 263 KVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999998875 5899999999999885 3 3467788889999865
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.93 E-value=2.8e-24 Score=236.54 Aligned_cols=241 Identities=20% Similarity=0.228 Sum_probs=156.0
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC-------CCccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT-------NSITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
.+++|||+||++++...|..++..|.+. |+|+++|+||||.|.... ...++++++++++..++++++.+ ++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~~-~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~-~v 1447 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISGS-ARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPG-KV 1447 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCC-CEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCC-CE
Confidence 4689999999999999999999999875 999999999999997542 13578999999999999999987 99
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcC--chHHH-HH-HHHHH---HhcCCCCCCCcc
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG--SNDLM-QQ-AQIFL---YANGKQNPPTSI 284 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~--~~~~~-~~-~~~~~---~~~~~~~~~~~~ 284 (394)
+|+||||||.+++.++.++|++|+++|++++......... ..+..... ..... .. ...+. +...........
T Consensus 1448 ~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1526 (1655)
T PLN02980 1448 TLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVA-RKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNH 1526 (1655)
T ss_pred EEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHH-HHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccC
Confidence 9999999999999999999999999999987543221111 11100000 00000 00 00000 000000000000
Q ss_pred hhhHHHHHHHhcccCCchhHHHHHHhc---cccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCC-
Q 016141 285 DLDRTLLRDLLFNRSAAKDVELALISM---RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPP- 360 (394)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~- 360 (394)
......+...+.. ............+ ...+....+ ..+++|+|+|+|++|.+++ +..+.+.+.+++
T Consensus 1527 ~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~dl~~~L--------~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a 1596 (1655)
T PLN02980 1527 PHFNKIVASRLLH-KDVPSLAKLLSDLSIGRQPSLWEDL--------KQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKS 1596 (1655)
T ss_pred HHHHHHHHHHHhc-CCHHHHHHHHHHhhhcccchHHHHH--------hhCCCCEEEEEECCCCccH-HHHHHHHHHcccc
Confidence 0001111111111 1111111111111 111112222 3346999999999999875 566677777665
Q ss_pred -----------ceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 361 -----------ELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 361 -----------~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
+++++++++||++++|+|+++++.|.+||+..
T Consensus 1597 ~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1597 KESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred ccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 48999999999999999999999999999865
No 41
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.92 E-value=8e-24 Score=197.46 Aligned_cols=106 Identities=17% Similarity=0.219 Sum_probs=89.0
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVGH 216 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 216 (394)
.++++|||+||++++...+ .+...+...+|+|+++|+||||.|..+.. ..++.+++++|+..++++++++ +++++||
T Consensus 25 ~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~-~~~lvG~ 102 (306)
T TIGR01249 25 PDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIK-NWLVFGG 102 (306)
T ss_pred CCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 3467899999987776544 34445555679999999999999985532 3467899999999999999988 9999999
Q ss_pred ChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 217 DFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
||||.+++.++.++|++|+++|++++...
T Consensus 103 S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 103 SWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred CHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 99999999999999999999999998654
No 42
>PLN02511 hydrolase
Probab=99.92 E-value=2.8e-24 Score=206.24 Aligned_cols=237 Identities=14% Similarity=0.148 Sum_probs=144.4
Q ss_pred CCCceEEEEcCCCCchhc-H-HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCC---CCcEE
Q 016141 138 PETSHFVLVHGGGFGAWC-W-YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN---EEKVI 212 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~---~~~~~ 212 (394)
.++|+||++||+++++.. | ..++..+.+.||+|+++|+||||.|...... .....+++|+.+++++++. +.+++
T Consensus 98 ~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~-~~~~~~~~Dl~~~i~~l~~~~~~~~~~ 176 (388)
T PLN02511 98 ADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQ-FYSASFTGDLRQVVDHVAGRYPSANLY 176 (388)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcC-EEcCCchHHHHHHHHHHHHHCCCCCEE
Confidence 457899999999776643 4 5677777788999999999999999754322 2235667788888877754 13899
Q ss_pred EEEeChHHHHHHHHHHhCCcc--cceEEEeecccCCCCcchHHHHHhh---cCchHHHHHHHHHHH------hcCC-CC-
Q 016141 213 LVGHDFGGACISYVMELFPSK--VAKAVFIAATMLTSGQSALDTISQQ---MGSNDLMQQAQIFLY------ANGK-QN- 279 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~--v~~lVli~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------~~~~-~~- 279 (394)
++||||||.+++.++.++|++ |.++|+++++..... ....+... .....+......... .... ..
T Consensus 177 lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~--~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~ 254 (388)
T PLN02511 177 AAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVI--ADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYN 254 (388)
T ss_pred EEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHH--HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccC
Confidence 999999999999999999987 888888876543200 00000000 000001101111000 0000 00
Q ss_pred ------CCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHH-H
Q 016141 280 ------PPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQ-E 352 (394)
Q Consensus 280 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~-~ 352 (394)
.....+++. .+...........+. +...+.. ..+..+++|+|+|+|++|+++|.+.. .
T Consensus 255 ~~~~~~~~~~~~fd~-~~t~~~~gf~~~~~y------y~~~s~~--------~~L~~I~vPtLiI~g~dDpi~p~~~~~~ 319 (388)
T PLN02511 255 IPLVANAKTVRDFDD-GLTRVSFGFKSVDAY------YSNSSSS--------DSIKHVRVPLLCIQAANDPIAPARGIPR 319 (388)
T ss_pred HHHHHhCCCHHHHHH-hhhhhcCCCCCHHHH------HHHcCch--------hhhccCCCCeEEEEcCCCCcCCcccCcH
Confidence 000000000 000000000000000 0011111 22344579999999999999987754 4
Q ss_pred HHHHhCCCceEEEEcCCCccCcccChHH------HHHHHHHHHhhh
Q 016141 353 AMINSNPPELVFEIKGSDHAPFFSKPRA------LHRILVEISKIT 392 (394)
Q Consensus 353 ~l~~~~~~~~~~~i~~agH~~~~e~p~~------v~~~i~~fl~~~ 392 (394)
.+.+.++++++++++++||+.++|+|+. +.+.|.+||+..
T Consensus 320 ~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~ 365 (388)
T PLN02511 320 EDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEAL 365 (388)
T ss_pred hHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHH
Confidence 5667789999999999999999999876 489999998653
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.92 E-value=7.3e-24 Score=215.08 Aligned_cols=246 Identities=19% Similarity=0.183 Sum_probs=149.7
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
..++|+|||+||++++...|..+++.|. .||+|+++|+||||.|+.+.. ..++++++++|+..++++++.+.+++|+|
T Consensus 22 ~~~~~~ivllHG~~~~~~~w~~~~~~L~-~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvG 100 (582)
T PRK05855 22 DPDRPTVVLVHGYPDNHEVWDGVAPLLA-DRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLA 100 (582)
T ss_pred CCCCCeEEEEcCCCchHHHHHHHHHHhh-cceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEe
Confidence 3457899999999999999999999995 479999999999999986432 46789999999999999998774599999
Q ss_pred eChHHHHHHHHHHh--CCcccceEEEeecccCCCCcchHHHHHhhc---Cc---hHHHHHHHHHHH---hcCCCCCCCc-
Q 016141 216 HDFGGACISYVMEL--FPSKVAKAVFIAATMLTSGQSALDTISQQM---GS---NDLMQQAQIFLY---ANGKQNPPTS- 283 (394)
Q Consensus 216 hS~Gg~~a~~~a~~--~p~~v~~lVli~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~---~~~~~~~~~~- 283 (394)
|||||.+++.++.+ .++++..++.++++.... ......... .. ...........+ ..........
T Consensus 101 hS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (582)
T PRK05855 101 HDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDH---VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLW 177 (582)
T ss_pred cChHHHHHHHHHhCccchhhhhhheeccCCchHH---HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHh
Confidence 99999999888875 234555555554432110 000000000 00 000000000000 0000000000
Q ss_pred chhhHHHHHHHhc--ccCCchhHHHH---------HHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHH
Q 016141 284 IDLDRTLLRDLLF--NRSAAKDVELA---------LISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQE 352 (394)
Q Consensus 284 ~~~~~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~ 352 (394)
.......+...+. ........... ...+... ...........++++|+++|+|++|.++|.+..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~ 253 (582)
T PRK05855 178 RLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRAN----MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYD 253 (582)
T ss_pred ccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhh----hhhhhccCccCCccCceEEEEeCCCcccCHHHhc
Confidence 0000000000000 00000000000 0000000 0000001112345799999999999999999999
Q ss_pred HHHHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 353 AMINSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 353 ~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
.+.+.+++.++++++ +||++++|+|+++++.|.+|++.
T Consensus 254 ~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 254 DLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred cccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 998888888888887 69999999999999999999975
No 44
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.91 E-value=1.6e-23 Score=175.75 Aligned_cols=224 Identities=15% Similarity=0.127 Sum_probs=153.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lv 214 (394)
+++..|+|+||+.++....+.+.+.|.++||.|.+|.+||||...... -..+.++|.+++.+..+.| +.+ .|.++
T Consensus 13 ~G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~f-l~t~~~DW~~~v~d~Y~~L~~~gy~-eI~v~ 90 (243)
T COG1647 13 GGNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDF-LKTTPRDWWEDVEDGYRDLKEAGYD-EIAVV 90 (243)
T ss_pred cCCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHH-hcCCHHHHHHHHHHHHHHHHHcCCC-eEEEE
Confidence 344899999999999999999999999999999999999999774322 3467888888887766655 566 99999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCc-chHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHH
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQ-SALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRD 293 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (394)
|.||||.+++.+|..+| ++++|.++++...... .....+... ...+-. ....+.+.+.+
T Consensus 91 GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y---------~~~~kk---------~e~k~~e~~~~ 150 (243)
T COG1647 91 GLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEY---------FRNAKK---------YEGKDQEQIDK 150 (243)
T ss_pred eecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHH---------HHHhhh---------ccCCCHHHHHH
Confidence 99999999999999998 9999999998753221 111111110 000000 00111112222
Q ss_pred HhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--CceEEEEcCCCc
Q 016141 294 LLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--PELVFEIKGSDH 371 (394)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~i~~agH 371 (394)
.+...............-...+....++ .+..|++++.|.+|.++|.+.++.+.+..- ..++..++++||
T Consensus 151 e~~~~~~~~~~~~~~~~~~i~~~~~~~~--------~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgH 222 (243)
T COG1647 151 EMKSYKDTPMTTTAQLKKLIKDARRSLD--------KIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGH 222 (243)
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHhhhh--------hcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCc
Confidence 2211111111111000000001112222 335999999999999999999999988864 479999999999
Q ss_pred cCccc-ChHHHHHHHHHHHhh
Q 016141 372 APFFS-KPRALHRILVEISKI 391 (394)
Q Consensus 372 ~~~~e-~p~~v~~~i~~fl~~ 391 (394)
.+..+ ..+.+.+.|..||+.
T Consensus 223 VIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 223 VITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred eeecchhHHHHHHHHHHHhhC
Confidence 98877 478999999999973
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.90 E-value=1.1e-22 Score=191.48 Aligned_cols=239 Identities=13% Similarity=0.216 Sum_probs=146.6
Q ss_pred CCCceEEEEcCCCCchh-cH-------------------------HHHHHHHHhCCcEEEEecCCCCCCCCCCC---CCc
Q 016141 138 PETSHFVLVHGGGFGAW-CW-------------------------YKTMTLLKESGFKVDAVDLTGSGVSSCDT---NSI 188 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~-~~-------------------------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~~ 188 (394)
..+.+||++||++.+.. .| ..+++.|.+.||.|+++|+||||.|.+.. ...
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~ 98 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHI 98 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccch
Confidence 34569999999999886 11 46789999999999999999999997542 123
Q ss_pred cCHHHHHHHHHHHHHHhCC-----------------------CCcEEEEEeChHHHHHHHHHHhCCc--------ccceE
Q 016141 189 TSLEQYVKPLIDTFNELGN-----------------------EEKVILVGHDFGGACISYVMELFPS--------KVAKA 237 (394)
Q Consensus 189 ~~~~~~~~~~~~~l~~l~~-----------------------~~~~~lvGhS~Gg~~a~~~a~~~p~--------~v~~l 237 (394)
.+++++++|+..+++.+.. +.+++|+||||||.+++.++.++++ .++++
T Consensus 99 ~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~ 178 (332)
T TIGR01607 99 NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGC 178 (332)
T ss_pred hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceE
Confidence 5899999999999876421 2479999999999999999876543 58999
Q ss_pred EEeecccCCCCcc-----hHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccC------CchhHHH
Q 016141 238 VFIAATMLTSGQS-----ALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRS------AAKDVEL 306 (394)
Q Consensus 238 Vli~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 306 (394)
|+++|........ ...... ..++..... +..............+... .+.+..+. .......
T Consensus 179 i~~s~~~~i~~~~~~~~~~~~~~~-----~~l~~~~~~-~~p~~~~~~~~~~~~~~~~-~~~~~~Dp~~~~~~~s~~~~~ 251 (332)
T TIGR01607 179 ISLSGMISIKSVGSDDSFKFKYFY-----LPVMNFMSR-VFPTFRISKKIRYEKSPYV-NDIIKFDKFRYDGGITFNLAS 251 (332)
T ss_pred EEeccceEEecccCCCcchhhhhH-----HHHHHHHHH-HCCcccccCccccccChhh-hhHHhcCccccCCcccHHHHH
Confidence 9998875321100 000000 001111100 0000000000000111111 11111110 0001111
Q ss_pred HHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC--CCceEEEEcCCCccCcccC-hHHHHH
Q 016141 307 ALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN--PPELVFEIKGSDHAPFFSK-PRALHR 383 (394)
Q Consensus 307 ~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~--~~~~~~~i~~agH~~~~e~-p~~v~~ 383 (394)
....... ........+ ..++|+|+|+|++|.+++++..+.+.+.. ++.+++++++++|.++.|. .+++.+
T Consensus 252 ~l~~~~~-~~~~~~~~i------~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~ 324 (332)
T TIGR01607 252 ELIKATD-TLDCDIDYI------PKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLK 324 (332)
T ss_pred HHHHHHH-HHHhhHhhC------CCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHH
Confidence 1000000 000011111 11589999999999999999988887665 5689999999999999985 789999
Q ss_pred HHHHHHh
Q 016141 384 ILVEISK 390 (394)
Q Consensus 384 ~i~~fl~ 390 (394)
.|.+||+
T Consensus 325 ~i~~wL~ 331 (332)
T TIGR01607 325 KIIEWIS 331 (332)
T ss_pred HHHHHhh
Confidence 9999986
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.90 E-value=3.1e-22 Score=179.36 Aligned_cols=241 Identities=19% Similarity=0.173 Sum_probs=161.2
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC----CCCcE
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG----NEEKV 211 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~ 211 (394)
....|++|++||+.++...|..+...|+.. |-.|+++|.|.||.|..- ...+..++++|+..+|+..+ .. ++
T Consensus 49 ~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~--~~h~~~~ma~dv~~Fi~~v~~~~~~~-~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI--TVHNYEAMAEDVKLFIDGVGGSTRLD-PV 125 (315)
T ss_pred cCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccc--cccCHHHHHHHHHHHHHHcccccccC-Cc
Confidence 356799999999999999999999999875 789999999999999654 45679999999999999985 44 99
Q ss_pred EEEEeChHH-HHHHHHHHhCCcccceEEEeecccCCCCc------chHHHHHhhcCch---HHHHHHHHHHHhcCCCCCC
Q 016141 212 ILVGHDFGG-ACISYVMELFPSKVAKAVFIAATMLTSGQ------SALDTISQQMGSN---DLMQQAQIFLYANGKQNPP 281 (394)
Q Consensus 212 ~lvGhS~Gg-~~a~~~a~~~p~~v~~lVli~~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 281 (394)
+|+|||||| .+++..+...|+.+..+|+++......+. ..+..+....... .-.......+....
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~----- 200 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVG----- 200 (315)
T ss_pred eecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHh-----
Confidence 999999999 78888888999999999998876532221 1112222211110 00000000000000
Q ss_pred CcchhhHHHHHHHhcccC---------CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHH
Q 016141 282 TSIDLDRTLLRDLLFNRS---------AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQE 352 (394)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~ 352 (394)
.......++...+.... +..........+....+...++. ..-..|||++.|.++..++.+...
T Consensus 201 -~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~------~~~~~pvlfi~g~~S~fv~~~~~~ 273 (315)
T KOG2382|consen 201 -FDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLED------GPYTGPVLFIKGLQSKFVPDEHYP 273 (315)
T ss_pred -cchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccc------cccccceeEEecCCCCCcChhHHH
Confidence 00000111111111000 00011111111111111111111 112589999999999999999999
Q ss_pred HHHHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 353 AMINSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 353 ~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
.+.+.+|+++++.++++|||++.|+|++|.+.|.+|+..+
T Consensus 274 ~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 274 RMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred HHHHhccchheeecccCCceeecCCHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999875
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=8.3e-22 Score=187.82 Aligned_cols=253 Identities=11% Similarity=0.065 Sum_probs=154.8
Q ss_pred CCCceEEEEcCCCCchhc-------------HHHHH---HHHHhCCcEEEEecCCCCCCCCCC-----------C-----
Q 016141 138 PETSHFVLVHGGGFGAWC-------------WYKTM---TLLKESGFKVDAVDLTGSGVSSCD-----------T----- 185 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-------------~~~~~---~~l~~~g~~v~~~d~~G~G~s~~~-----------~----- 185 (394)
...++||++|++.++... |..++ ..|...-|.||++|..|-|.|..| +
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 345899999999886522 55554 234444599999999998753211 0
Q ss_pred ----CCccCHHHHHHHHHHHHHHhCCCCcEE-EEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcc---hHHHHHh
Q 016141 186 ----NSITSLEQYVKPLIDTFNELGNEEKVI-LVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS---ALDTISQ 257 (394)
Q Consensus 186 ----~~~~~~~~~~~~~~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~---~~~~~~~ 257 (394)
...++++++++++..++++++++ +++ ++||||||++|+.+|.++|++|+++|++++........ .......
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ 212 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAE 212 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHH
Confidence 12478999999999999999998 886 99999999999999999999999999998876543321 1111111
Q ss_pred ----hcC-----------chHHHHHHHH----------HHHhcCCCCCC-Cc-------chhh-HHHHHHH---hcccCC
Q 016141 258 ----QMG-----------SNDLMQQAQI----------FLYANGKQNPP-TS-------IDLD-RTLLRDL---LFNRSA 300 (394)
Q Consensus 258 ----~~~-----------~~~~~~~~~~----------~~~~~~~~~~~-~~-------~~~~-~~~~~~~---~~~~~~ 300 (394)
... ...-+..... ++......... .. .... ..++... +....+
T Consensus 213 ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~D 292 (389)
T PRK06765 213 AIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVD 292 (389)
T ss_pred HHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccC
Confidence 100 0000011100 00000000000 00 0000 0111111 111112
Q ss_pred chhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC----CceEEEEcC-CCccCcc
Q 016141 301 AKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP----PELVFEIKG-SDHAPFF 375 (394)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~----~~~~~~i~~-agH~~~~ 375 (394)
...+......+...+...... .....+..+++|+|+|+|++|.++|++..+.+.+.++ +++++++++ +||+.++
T Consensus 293 an~~l~l~~a~~~~d~g~~~~-dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~l 371 (389)
T PRK06765 293 ANHWLYLAKAVQLFDAGHGFS-SLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGV 371 (389)
T ss_pred hhhHHHHHHHHHhcCCccccC-CHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhh
Confidence 222222222222221110000 0011233457999999999999999999999988886 689999985 8999999
Q ss_pred cChHHHHHHHHHHHhhh
Q 016141 376 SKPRALHRILVEISKIT 392 (394)
Q Consensus 376 e~p~~v~~~i~~fl~~~ 392 (394)
++|+++++.|.+||+++
T Consensus 372 e~p~~~~~~I~~FL~~~ 388 (389)
T PRK06765 372 FDIHLFEKKIYEFLNRK 388 (389)
T ss_pred cCHHHHHHHHHHHHccc
Confidence 99999999999999864
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.89 E-value=3.9e-21 Score=185.39 Aligned_cols=217 Identities=12% Similarity=0.061 Sum_probs=140.7
Q ss_pred CCCceEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEE
Q 016141 138 PETSHFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVIL 213 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~l 213 (394)
+..|+||++||+++.. ..|..++..|+++||+|+++|+||+|.|.... ...+......++.+++... +.+ ++++
T Consensus 192 ~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~-~~~d~~~~~~avld~l~~~~~vd~~-ri~l 269 (414)
T PRK05077 192 GPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK-LTQDSSLLHQAVLNALPNVPWVDHT-RVAA 269 (414)
T ss_pred CCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC-ccccHHHHHHHHHHHHHhCcccCcc-cEEE
Confidence 3456777777766653 56888889999999999999999999986532 1234444555666666554 344 9999
Q ss_pred EEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHH
Q 016141 214 VGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRD 293 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (394)
+||||||++|+.+|..+|++|+++|+++++....... ..... ...... ...+... ..... .....+..
T Consensus 270 ~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~-~~~~~---~~p~~~---~~~la~~-lg~~~----~~~~~l~~ 337 (414)
T PRK05077 270 FGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD-PKRQQ---QVPEMY---LDVLASR-LGMHD----ASDEALRV 337 (414)
T ss_pred EEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcc-hhhhh---hchHHH---HHHHHHH-hCCCC----CChHHHHH
Confidence 9999999999999999999999999999875311000 00000 000000 0000000 00000 00000000
Q ss_pred HhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccC
Q 016141 294 LLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAP 373 (394)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~ 373 (394)
....+.. .....+ ...+++|+|+|+|++|.++|++..+.+.+..++.++++++++ +
T Consensus 338 -------------~l~~~sl-~~~~~l-------~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~ 393 (414)
T PRK05077 338 -------------ELNRYSL-KVQGLL-------GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---P 393 (414)
T ss_pred -------------Hhhhccc-hhhhhh-------ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---C
Confidence 0000000 000000 023469999999999999999999999999999999999985 5
Q ss_pred cccChHHHHHHHHHHHhhh
Q 016141 374 FFSKPRALHRILVEISKIT 392 (394)
Q Consensus 374 ~~e~p~~v~~~i~~fl~~~ 392 (394)
+++.++++.+.|.+||+++
T Consensus 394 ~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 394 VYRNFDKALQEISDWLEDR 412 (414)
T ss_pred ccCCHHHHHHHHHHHHHHH
Confidence 6789999999999999876
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.88 E-value=1.2e-21 Score=179.71 Aligned_cols=232 Identities=17% Similarity=0.076 Sum_probs=136.1
Q ss_pred CCceEEEEcCCCC----chhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh-----CCCC
Q 016141 139 ETSHFVLVHGGGF----GAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL-----GNEE 209 (394)
Q Consensus 139 ~~~~vvl~HG~~~----~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l-----~~~~ 209 (394)
.++.||++||++. +...|..+++.|+++||.|+++|++|||.|.... .+++++.+|+.++++.+ +.+
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~---~~~~~~~~d~~~~~~~l~~~~~g~~- 100 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN---LGFEGIDADIAAAIDAFREAAPHLR- 100 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhhCCCCC-
Confidence 4567888887653 3344677889999999999999999999987432 46778888888888776 445
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHH
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (394)
+++++||||||.+++.+|.. +++|+++|++++................. ....... .++... .............
T Consensus 101 ~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~-~~g~~~~~~~~~~ 175 (274)
T TIGR03100 101 RIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYY-LGQLLSA--DFWRKL-LSGEVNLGSSLRG 175 (274)
T ss_pred cEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHH-HHHHhCh--HHHHHh-cCCCccHHHHHHH
Confidence 89999999999999999874 56899999999875432211111111000 0000000 000000 0000000000010
Q ss_pred HHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHH------HHHHHhC--CCc
Q 016141 290 LLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQ------EAMINSN--PPE 361 (394)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~------~~l~~~~--~~~ 361 (394)
+..... ... ..................+..+++|+++++|+.|...+ +.. ..+.+.+ +++
T Consensus 176 ~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~v 243 (274)
T TIGR03100 176 LGDALL-KAR----------QKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPGI 243 (274)
T ss_pred HHHHHH-hhh----------hcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCCe
Confidence 100000 000 00000000000000001111236999999999998763 322 4445544 789
Q ss_pred eEEEEcCCCccCcccC-hHHHHHHHHHHHhh
Q 016141 362 LVFEIKGSDHAPFFSK-PRALHRILVEISKI 391 (394)
Q Consensus 362 ~~~~i~~agH~~~~e~-p~~v~~~i~~fl~~ 391 (394)
+++.+++++|++..+. ++++.+.|.+||++
T Consensus 244 ~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 244 ERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred EEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 9999999999986665 59999999999963
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.88 E-value=2.6e-21 Score=181.82 Aligned_cols=241 Identities=18% Similarity=0.125 Sum_probs=136.7
Q ss_pred CCCceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCcc---CHHHHHHHHHHHHHHhCCCCcEE
Q 016141 138 PETSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSIT---SLEQYVKPLIDTFNELGNEEKVI 212 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~~l~~l~~~~~~~ 212 (394)
..+|+||++||++++... +..++..|.++||+|+++|+||||.+.......+ ..+|....+..+.+.++.. +++
T Consensus 56 ~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~-~~~ 134 (324)
T PRK10985 56 RHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHV-PTA 134 (324)
T ss_pred CCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCC-CEE
Confidence 346899999999877543 4678899999999999999999997753321111 2344333333333445555 899
Q ss_pred EEEeChHHHHHHHHHHhCCcc--cceEEEeecccCCCCcc-hH-HHHH---hhcCchHHHHHHHHHHHhcCCCCCCCcch
Q 016141 213 LVGHDFGGACISYVMELFPSK--VAKAVFIAATMLTSGQS-AL-DTIS---QQMGSNDLMQQAQIFLYANGKQNPPTSID 285 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~--v~~lVli~~~~~~~~~~-~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (394)
++||||||.+++.++.++++. +.++|+++++....... .. ..+. .......+.......... ..........
T Consensus 135 ~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~ 213 (324)
T PRK10985 135 AVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAA-YPGTLPINLA 213 (324)
T ss_pred EEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh-ccccccCCHH
Confidence 999999999888888776654 89999999875422100 00 0000 000000011111000000 0000000000
Q ss_pred -h----hHHHHHHHhcccC-CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC
Q 016141 286 -L----DRTLLRDLLFNRS-AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP 359 (394)
Q Consensus 286 -~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~ 359 (394)
. ....+.+.+.... ..... ...+...+....+ ..+++|+++|+|++|.+++++..+.+.+..+
T Consensus 214 ~~~~~~~~~~fd~~~~~~~~g~~~~---~~~y~~~~~~~~l--------~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~ 282 (324)
T PRK10985 214 QLKSVRRLREFDDLITARIHGFADA---IDYYRQCSALPLL--------NQIRKPTLIIHAKDDPFMTHEVIPKPESLPP 282 (324)
T ss_pred HHhcCCcHHHHhhhheeccCCCCCH---HHHHHHCChHHHH--------hCCCCCEEEEecCCCCCCChhhChHHHHhCC
Confidence 0 0000000110000 00000 0001111111222 3446999999999999999988888878888
Q ss_pred CceEEEEcCCCccCcccCh-----HHHHHHHHHHHhh
Q 016141 360 PELVFEIKGSDHAPFFSKP-----RALHRILVEISKI 391 (394)
Q Consensus 360 ~~~~~~i~~agH~~~~e~p-----~~v~~~i~~fl~~ 391 (394)
+.++++++++||+.++|.. --..+.+.+|+..
T Consensus 283 ~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 283 NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 9999999999999998842 2456677777753
No 51
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.87 E-value=4.3e-22 Score=164.18 Aligned_cols=230 Identities=14% Similarity=0.032 Sum_probs=153.3
Q ss_pred CCCc-eEEEEcCC-CCchhcHHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCH---HHHHHHHHHHHHHhCCCCcE
Q 016141 138 PETS-HFVLVHGG-GFGAWCWYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSL---EQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 138 ~~~~-~vvl~HG~-~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~---~~~~~~~~~~l~~l~~~~~~ 211 (394)
++++ .|++++|. |+....|.+.+..|.+. .+.|+++|.||+|.|..+.. .+.. ...+++...+++.|+.+ ++
T Consensus 39 G~G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~~~ff~~Da~~avdLM~aLk~~-~f 116 (277)
T KOG2984|consen 39 GHGPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFEVQFFMKDAEYAVDLMEALKLE-PF 116 (277)
T ss_pred CCCCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc-cchHHHHHHhHHHHHHHHHHhCCC-Ce
Confidence 4444 78899998 44556788877766553 48999999999999976543 3333 44555667788899998 99
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcch--HHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHH
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA--LDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (394)
.++|||=||.+|+..|+++++.|..+|+.++....+.... +..+.....+....+... ......+
T Consensus 117 svlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~-------------e~~Yg~e 183 (277)
T KOG2984|consen 117 SVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY-------------EDHYGPE 183 (277)
T ss_pred eEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH-------------HHhcCHH
Confidence 9999999999999999999999999999998765433211 111111111110000000 0000111
Q ss_pred HHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCC
Q 016141 290 LLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGS 369 (394)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~a 369 (394)
.+...+... -+..-....+...++ ....+.+++||+||+||++|++++...+..+....+.+++.+++.+
T Consensus 184 ~f~~~wa~w---vD~v~qf~~~~dG~f-------Cr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peG 253 (277)
T KOG2984|consen 184 TFRTQWAAW---VDVVDQFHSFCDGRF-------CRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEG 253 (277)
T ss_pred HHHHHHHHH---HHHHHHHhhcCCCch-------HhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCC
Confidence 111111000 000000011111111 1112334579999999999999999999999999999999999999
Q ss_pred CccCcccChHHHHHHHHHHHhhh
Q 016141 370 DHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 370 gH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
+|.+++..+++|+..+.+||++.
T Consensus 254 kHn~hLrya~eFnklv~dFl~~~ 276 (277)
T KOG2984|consen 254 KHNFHLRYAKEFNKLVLDFLKST 276 (277)
T ss_pred CcceeeechHHHHHHHHHHHhcc
Confidence 99999999999999999999864
No 52
>PRK11071 esterase YqiA; Provisional
Probab=99.86 E-value=4.7e-20 Score=159.30 Aligned_cols=184 Identities=16% Similarity=0.163 Sum_probs=127.3
Q ss_pred ceEEEEcCCCCchhcHHH--HHHHHHhC--CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 016141 141 SHFVLVHGGGFGAWCWYK--TMTLLKES--GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGH 216 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~--~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 216 (394)
|+|||+||++++...|.. +.+.|.+. +|+|+++|+|||+ +++++++.++++.++.+ +++++||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~------------~~~~~~l~~l~~~~~~~-~~~lvG~ 68 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP------------ADAAELLESLVLEHGGD-PLGLVGS 68 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH------------HHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 689999999999999974 44666653 6999999999985 46788999999999887 9999999
Q ss_pred ChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhc
Q 016141 217 DFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLF 296 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (394)
||||++++.+|.++|. .+|+++|+... ...+...... ...........+....+.+.
T Consensus 69 S~Gg~~a~~~a~~~~~---~~vl~~~~~~~-----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~d~-- 125 (190)
T PRK11071 69 SLGGYYATWLSQCFML---PAVVVNPAVRP-----FELLTDYLGE-------------NENPYTGQQYVLESRHIYDL-- 125 (190)
T ss_pred CHHHHHHHHHHHHcCC---CEEEECCCCCH-----HHHHHHhcCC-------------cccccCCCcEEEcHHHHHHH--
Confidence 9999999999999983 46888886431 1111111000 00000000011111111111
Q ss_pred ccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCccc
Q 016141 297 NRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFS 376 (394)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e 376 (394)
..+. .. .+ . ..+|+++|+|++|.++|.+.+..+.+. +++++++|++|.+ +
T Consensus 126 ------------~~~~---~~----~i-----~-~~~~v~iihg~~De~V~~~~a~~~~~~---~~~~~~~ggdH~f--~ 175 (190)
T PRK11071 126 ------------KVMQ---ID----PL-----E-SPDLIWLLQQTGDEVLDYRQAVAYYAA---CRQTVEEGGNHAF--V 175 (190)
T ss_pred ------------HhcC---Cc----cC-----C-ChhhEEEEEeCCCCcCCHHHHHHHHHh---cceEEECCCCcch--h
Confidence 0010 00 01 1 248899999999999999999988884 4777889999987 5
Q ss_pred ChHHHHHHHHHHHh
Q 016141 377 KPRALHRILVEISK 390 (394)
Q Consensus 377 ~p~~v~~~i~~fl~ 390 (394)
..+++.+.+.+|++
T Consensus 176 ~~~~~~~~i~~fl~ 189 (190)
T PRK11071 176 GFERYFNQIVDFLG 189 (190)
T ss_pred hHHHhHHHHHHHhc
Confidence 55889999999985
No 53
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=6.9e-22 Score=175.85 Aligned_cols=209 Identities=22% Similarity=0.207 Sum_probs=130.0
Q ss_pred cEEEEecCCCCCCCCC---CCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 168 FKVDAVDLTGSGVSSC---DTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 168 ~~v~~~d~~G~G~s~~---~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
|+|+++|+||+|.|+. .....++.+++++++..+++.++.+ +++++||||||.+++.+|..+|++|+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999995 4457789999999999999999998 89999999999999999999999999999999962
Q ss_pred ----CCCCcchHH-HHHhhcC--chH-HHHHHHHHHHhcC----CCCCCCcchhhHHHHHHHhcccCCchhHHH-----H
Q 016141 245 ----LTSGQSALD-TISQQMG--SND-LMQQAQIFLYANG----KQNPPTSIDLDRTLLRDLLFNRSAAKDVEL-----A 307 (394)
Q Consensus 245 ----~~~~~~~~~-~~~~~~~--~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 307 (394)
......... .+..... ... ............. ...................... ....... .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARF-AETDAFDNMFWNA 158 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHH-HHHHHHhhhcccc
Confidence 000000000 0000000 000 0000000000000 0000000000000000000000 0000000 0
Q ss_pred HHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccChHHHHHHHH
Q 016141 308 LISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKPRALHRILV 386 (394)
Q Consensus 308 ~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~ 386 (394)
.......+....+ ..+++|+++++|++|.++|++....+.+.+|+.++++++++||+.++++|+++++.|.
T Consensus 159 ~~~~~~~~~~~~l--------~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 159 LGYFSVWDPSPAL--------SNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHH--------TTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred ccccccccccccc--------cccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 0001111111122 2347999999999999999999999999999999999999999999999999999885
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=3e-20 Score=168.49 Aligned_cols=198 Identities=14% Similarity=0.151 Sum_probs=125.5
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC-CCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEEE
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS-GVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVILV 214 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lv 214 (394)
..++||++||++.....+..+++.|+++||.|+.+|.+|+ |.|++... ..+......|+.++++++ +.+ ++.|+
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~-~~t~s~g~~Dl~aaid~lk~~~~~-~I~Li 113 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID-EFTMSIGKNSLLTVVDWLNTRGIN-NLGLI 113 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc-cCcccccHHHHHHHHHHHHhcCCC-ceEEE
Confidence 4478999999999887799999999999999999999988 89976442 223333456665555554 444 89999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhc-CCCCCCCcc-----hh-h
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYAN-GKQNPPTSI-----DL-D 287 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~-~ 287 (394)
||||||.+|+..|... .++++|+.+|..... +.+.... ...+.. .....+... .. .
T Consensus 114 G~SmGgava~~~A~~~--~v~~lI~~sp~~~l~-----d~l~~~~----------~~~~~~~p~~~lp~~~d~~g~~l~~ 176 (307)
T PRK13604 114 AASLSARIAYEVINEI--DLSFLITAVGVVNLR-----DTLERAL----------GYDYLSLPIDELPEDLDFEGHNLGS 176 (307)
T ss_pred EECHHHHHHHHHhcCC--CCCEEEEcCCcccHH-----HHHHHhh----------hcccccCcccccccccccccccccH
Confidence 9999999997777633 399999999876421 1111100 000000 000000000 00 0
Q ss_pred HHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--CceEEE
Q 016141 288 RTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--PELVFE 365 (394)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~~ 365 (394)
..++...+ . .++......+ ......++|+|+|||++|.+||.+.++.+.+.++ ++++++
T Consensus 177 ~~f~~~~~--------------~---~~~~~~~s~i--~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~ 237 (307)
T PRK13604 177 EVFVTDCF--------------K---HGWDTLDSTI--NKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYS 237 (307)
T ss_pred HHHHHHHH--------------h---cCccccccHH--HHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEE
Confidence 11111110 0 0001000000 0111225999999999999999999999998775 689999
Q ss_pred EcCCCccCc
Q 016141 366 IKGSDHAPF 374 (394)
Q Consensus 366 i~~agH~~~ 374 (394)
++|++|.+.
T Consensus 238 i~Ga~H~l~ 246 (307)
T PRK13604 238 LIGSSHDLG 246 (307)
T ss_pred eCCCccccC
Confidence 999999875
No 55
>PRK10566 esterase; Provisional
Probab=99.85 E-value=1.2e-19 Score=164.20 Aligned_cols=206 Identities=15% Similarity=0.163 Sum_probs=124.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCH-------HHHHHHHHHHHHHh---C-
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSL-------EQYVKPLIDTFNEL---G- 206 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-------~~~~~~~~~~l~~l---~- 206 (394)
+..|+||++||++++...|..++..|+++||.|+++|+||||.+..... ...+ .+..+++.++++.+ +
T Consensus 25 ~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (249)
T PRK10566 25 TPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDE-ARRLNHFWQILLQNMQEFPTLRAAIREEGW 103 (249)
T ss_pred CCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCcc-ccchhhHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3468999999999999899999999999999999999999997632211 1111 12233444444332 2
Q ss_pred C-CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcch
Q 016141 207 N-EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSID 285 (394)
Q Consensus 207 ~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (394)
+ .++++++|||+||.+++.++.++|+....++++++... ..+.. ..+..... .. .
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~-------~~~~~-------------~~~~~~~~--~~--~ 159 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYF-------TSLAR-------------TLFPPLIP--ET--A 159 (249)
T ss_pred cCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHH-------HHHHH-------------Hhcccccc--cc--c
Confidence 2 14899999999999999999988874444444433211 00000 00000000 00 0
Q ss_pred hhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCC-----
Q 016141 286 LDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPP----- 360 (394)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~----- 360 (394)
.....+...+ ......+....+..+ .++|+|+++|++|.++|++..+.+.+.++.
T Consensus 160 ~~~~~~~~~~-------------~~~~~~~~~~~~~~i-------~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~ 219 (249)
T PRK10566 160 AQQAEFNNIV-------------APLAEWEVTHQLEQL-------ADRPLLLWHGLADDVVPAAESLRLQQALRERGLDK 219 (249)
T ss_pred ccHHHHHHHH-------------HHHhhcChhhhhhhc-------CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCc
Confidence 0000000000 000001111111111 148999999999999999998888876642
Q ss_pred -ceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 361 -ELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 361 -~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
.++..++++||.+. + ...+.+.+||+++
T Consensus 220 ~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~~ 248 (249)
T PRK10566 220 NLTCLWEPGVRHRIT---P-EALDAGVAFFRQH 248 (249)
T ss_pred ceEEEecCCCCCccC---H-HHHHHHHHHHHhh
Confidence 46778899999864 3 4668888999865
No 56
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.84 E-value=3.8e-20 Score=160.31 Aligned_cols=106 Identities=31% Similarity=0.407 Sum_probs=92.0
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC--CCCcEEE
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG--NEEKVIL 213 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~~l 213 (394)
..++|.++++||+|.+.-.|..++..|... ..+|+++|+||||.+........+.+.+++|+.++++++= ...+|+|
T Consensus 71 ~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iil 150 (343)
T KOG2564|consen 71 ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIIL 150 (343)
T ss_pred CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEE
Confidence 468899999999999999999999988764 5788999999999998887788999999999999998872 2348999
Q ss_pred EEeChHHHHHHHHHHh--CCcccceEEEeecc
Q 016141 214 VGHDFGGACISYVMEL--FPSKVAKAVFIAAT 243 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~--~p~~v~~lVli~~~ 243 (394)
|||||||.+|.+.|.. .|. +.+++.++..
T Consensus 151 VGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 151 VGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred Eeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 9999999999887753 565 8999998865
No 57
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=4.9e-19 Score=168.84 Aligned_cols=248 Identities=15% Similarity=0.136 Sum_probs=151.6
Q ss_pred CCceEEEEcCCCCchhcHH------HHHHHHHhCCcEEEEecCCCCCCCCCCC-----C---CccCHHHHH-HHHHHHHH
Q 016141 139 ETSHFVLVHGGGFGAWCWY------KTMTLLKESGFKVDAVDLTGSGVSSCDT-----N---SITSLEQYV-KPLIDTFN 203 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~~-----~---~~~~~~~~~-~~~~~~l~ 203 (394)
.+|+|||+||++.++..|. .++..|+++||+|+++|+||++.|.+.. . ..+++++++ .|+.++++
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id 152 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIH 152 (395)
T ss_pred CCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHH
Confidence 4689999999999988883 4556788999999999999988663211 1 246888888 79999999
Q ss_pred Hh---CCCCcEEEEEeChHHHHHHHHHHhCCc---ccceEEEeecccCCCC-cc-hHHHHHh--------hc------Cc
Q 016141 204 EL---GNEEKVILVGHDFGGACISYVMELFPS---KVAKAVFIAATMLTSG-QS-ALDTISQ--------QM------GS 261 (394)
Q Consensus 204 ~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lVli~~~~~~~~-~~-~~~~~~~--------~~------~~ 261 (394)
++ ..+ ++++|||||||.+++.++ .+|+ +|+.+++++|...... .. ....+.. .. ..
T Consensus 153 ~i~~~~~~-~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 230 (395)
T PLN02872 153 YVYSITNS-KIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFR 230 (395)
T ss_pred HHHhccCC-ceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCC
Confidence 86 234 999999999999998555 5776 6889999998764321 11 1111100 00 00
Q ss_pred hHHHHHHHH-H----------H-HhcCCCCCCCcchhhHHHHHHHhcc---cCCchhHHHHHH-----hccccCCccccc
Q 016141 262 NDLMQQAQI-F----------L-YANGKQNPPTSIDLDRTLLRDLLFN---RSAAKDVELALI-----SMRPIPFAPVLE 321 (394)
Q Consensus 262 ~~~~~~~~~-~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~~~ 321 (394)
...+..... + + ...+.. ..+....+...+.. ..+......... .+...++.....
T Consensus 231 ~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-----~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n 305 (395)
T PLN02872 231 SDVLVKLLDSICEGHMDCNDLLTSITGTN-----CCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKN 305 (395)
T ss_pred cHHHHHHHHHHccCchhHHHHHHHHhCCC-----cccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhh
Confidence 111111100 0 0 000000 01111111111111 111122111111 122233321110
Q ss_pred c--c---c--cCCCCCC--CcCEEEEecCCCCCCChHHHHHHHHhCCC-ceEEEEcCCCcc---CcccChHHHHHHHHHH
Q 016141 322 K--L---S--VSDDNYG--SVPRFYIKTLQDCAIPVSVQEAMINSNPP-ELVFEIKGSDHA---PFFSKPRALHRILVEI 388 (394)
Q Consensus 322 ~--i---~--~~~~~~~--~~PvLii~G~~D~~vp~~~~~~l~~~~~~-~~~~~i~~agH~---~~~e~p~~v~~~i~~f 388 (394)
. . . .-.+..+ ++|+++++|++|.+++++..+.+.+.+++ .+++.++++||. ...+.|+++.+.|.+|
T Consensus 306 ~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~f 385 (395)
T PLN02872 306 LKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQF 385 (395)
T ss_pred HHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHH
Confidence 0 0 0 1113334 58999999999999999999999999887 688899999996 4458899999999999
Q ss_pred Hhhhc
Q 016141 389 SKITH 393 (394)
Q Consensus 389 l~~~~ 393 (394)
+++..
T Consensus 386 L~~~~ 390 (395)
T PLN02872 386 FRSLG 390 (395)
T ss_pred HHHhh
Confidence 98753
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.83 E-value=4.8e-19 Score=173.48 Aligned_cols=234 Identities=16% Similarity=0.089 Sum_probs=142.5
Q ss_pred CCceEEEEcCCCCchhcHH-----HHHHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEE
Q 016141 139 ETSHFVLVHGGGFGAWCWY-----KTMTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVI 212 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~ 212 (394)
.+++|||+||+.....+|+ .++.+|.++||+|+++|++|+|.+..... ..+..+.+.+.+..+++.++.+ +++
T Consensus 187 ~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~-kv~ 265 (532)
T TIGR01838 187 HKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEK-QVN 265 (532)
T ss_pred CCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCC-CeE
Confidence 4689999999988888885 79999999999999999999998865432 2344445556677777777887 999
Q ss_pred EEEeChHHHHHH----HHHHhC-CcccceEEEeecccCCCCcchHHHHHhhcCc--------------hHHHHHHHHH--
Q 016141 213 LVGHDFGGACIS----YVMELF-PSKVAKAVFIAATMLTSGQSALDTISQQMGS--------------NDLMQQAQIF-- 271 (394)
Q Consensus 213 lvGhS~Gg~~a~----~~a~~~-p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~-- 271 (394)
++||||||.++. .+++.+ +++|+++|++++............+...... ...+.....+
T Consensus 266 lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lr 345 (532)
T TIGR01838 266 CVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLR 345 (532)
T ss_pred EEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcC
Confidence 999999999852 245555 7899999999998765432222111100000 0001000000
Q ss_pred --------HHhcCCCCCCCcchhhHHHHHHHhcccCC--chhHHHHHHh-ccccCCccccccc----ccCCCCCCCcCEE
Q 016141 272 --------LYANGKQNPPTSIDLDRTLLRDLLFNRSA--AKDVELALIS-MRPIPFAPVLEKL----SVSDDNYGSVPRF 336 (394)
Q Consensus 272 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~i----~~~~~~~~~~PvL 336 (394)
...+....... ..++ +..+..+... .......... +....+. ...+ ....+..+++|++
T Consensus 346 p~~l~w~~~v~~yl~g~~~-~~fd---ll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~--~G~~~v~g~~~dL~~I~vPvL 419 (532)
T TIGR01838 346 ENDLIWNYYVDNYLKGKSP-VPFD---LLFWNSDSTNLPGKMHNFYLRNLYLQNALT--TGGLEVCGVRLDLSKVKVPVY 419 (532)
T ss_pred hhhHHHHHHHHHHhcCCCc-cchh---HHHHhccCccchHHHHHHHHHHHHhcCCCc--CCeeEECCEecchhhCCCCEE
Confidence 00000000000 0000 0001101111 1111111101 1111111 0111 1234556789999
Q ss_pred EEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccChH
Q 016141 337 YIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKPR 379 (394)
Q Consensus 337 ii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p~ 379 (394)
+|+|++|.++|.+.++.+.+.+++.+.++++++||.+++++|.
T Consensus 420 vV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 420 IIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred EEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 9999999999999999999999999999999999999999874
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.83 E-value=1e-18 Score=166.02 Aligned_cols=246 Identities=12% Similarity=0.120 Sum_probs=141.9
Q ss_pred CceEEEEcCCCCchhcH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHH-HHH----HHHHhCCCC
Q 016141 140 TSHFVLVHGGGFGAWCW-----YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKP-LID----TFNELGNEE 209 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-~~~----~l~~l~~~~ 209 (394)
+++||++||+..+...| ..+++.|.++||+|+++|++|+|.+.. ..++++++.+ +.+ +++..+.+
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~----~~~~~d~~~~~~~~~v~~l~~~~~~~- 136 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADR----YLTLDDYINGYIDKCVDYICRTSKLD- 136 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHh----cCCHHHHHHHHHHHHHHHHHHHhCCC-
Confidence 45799999986655554 589999999999999999999998753 2466666543 444 44445666
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcc-hHHHHHhhcC----------c-hHHHHHHHHHHHhcCC
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQS-ALDTISQQMG----------S-NDLMQQAQIFLYANGK 277 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~-~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~ 277 (394)
+++++||||||.+++.++..+|++|+++|+++++....... ....+..... . ...+.....++.....
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~ 216 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSL 216 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchh
Confidence 99999999999999999999999999999999877543211 1111111100 0 0011110000000000
Q ss_pred -C-------CCCCcchhhHHHH--HHHhcccCCc--hhHHHHHHhc-cccCCc-cccc-ccccCCCCCCCcCEEEEecCC
Q 016141 278 -Q-------NPPTSIDLDRTLL--RDLLFNRSAA--KDVELALISM-RPIPFA-PVLE-KLSVSDDNYGSVPRFYIKTLQ 342 (394)
Q Consensus 278 -~-------~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~-~~~~~~-~~~~-~i~~~~~~~~~~PvLii~G~~ 342 (394)
. ...........+. ..+....... .........+ ....+. ..+. .-....+..+++|+++++|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~ 296 (350)
T TIGR01836 217 GYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAER 296 (350)
T ss_pred hhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCC
Confidence 0 0000000000000 0111111111 0000000000 000000 0000 000112334579999999999
Q ss_pred CCCCChHHHHHHHHhCCC--ceEEEEcCCCccCcccC---hHHHHHHHHHHHhh
Q 016141 343 DCAIPVSVQEAMINSNPP--ELVFEIKGSDHAPFFSK---PRALHRILVEISKI 391 (394)
Q Consensus 343 D~~vp~~~~~~l~~~~~~--~~~~~i~~agH~~~~e~---p~~v~~~i~~fl~~ 391 (394)
|.++|++..+.+.+.+++ .++++++ +||..++.. ++++.+.|.+||++
T Consensus 297 D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 297 DHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 999999999999888864 5667777 699987765 47899999999976
No 60
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.82 E-value=1.5e-18 Score=155.91 Aligned_cols=241 Identities=22% Similarity=0.278 Sum_probs=144.7
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhC--CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKES--GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+|+||++||++++...|......+... .|+|+++|+||||.|. .. ......+++++..+++.++.. +++++|||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~--~~~~~~~~~~~~~~~~~~~~~-~~~l~G~S 96 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA--GYSLSAYADDLAALLDALGLE-KVVLVGHS 96 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc--cccHHHHHHHHHHHHHHhCCC-ceEEEEec
Confidence 559999999999999998843444332 1899999999999997 11 345556699999999999988 79999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCCCC-----------cchHHHHHhhcCchHHHHHHHHHHHhcC-CCCCCCcch
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLTSG-----------QSALDTISQQMGSNDLMQQAQIFLYANG-KQNPPTSID 285 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (394)
+||.+++.++.++|+++.++|++++...... .............. ............ .......
T Consensus 97 ~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 172 (282)
T COG0596 97 MGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLD--AAAFAALLAALGLLAALAAA-- 172 (282)
T ss_pred ccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccc--hhhhhhhhhccccccccccc--
Confidence 9999999999999999999999998754110 00000000000000 000000000000 0000000
Q ss_pred hhHHHHHHHhcccCCchhHHHHHHh----ccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCC-
Q 016141 286 LDRTLLRDLLFNRSAAKDVELALIS----MRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPP- 360 (394)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~- 360 (394)
.. ....... .............. .....................++|+++++|++|.+.|......+.+..++
T Consensus 173 ~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~ 250 (282)
T COG0596 173 AR-AGLAEAL-RAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPND 250 (282)
T ss_pred ch-hcccccc-ccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCC
Confidence 00 0000000 00000000000000 00000000000011122334469999999999977777666777778885
Q ss_pred ceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 361 ELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 361 ~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
.++++++++||++++++|+.+++.+.+|+.
T Consensus 251 ~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 251 ARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred ceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 999999999999999999999999988554
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.80 E-value=7.2e-19 Score=145.26 Aligned_cols=144 Identities=24% Similarity=0.362 Sum_probs=111.4
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
+||++||++.+...|..+++.|+++||.|+.+|+||+|.+.. ....+++.+++. ....+.+ +++++|||+||.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~-~i~l~G~S~Gg~ 73 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG----ADAVERVLADIR--AGYPDPD-RIILIGHSMGGA 73 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH----SHHHHHHHHHHH--HHHCTCC-EEEEEEETHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch----hHHHHHHHHHHH--hhcCCCC-cEEEEEEccCcH
Confidence 699999999999999999999999999999999999998731 123333333332 1123445 999999999999
Q ss_pred HHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCc
Q 016141 222 CISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAA 301 (394)
Q Consensus 222 ~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (394)
+++.++.+. .+|+++|++++... . .
T Consensus 74 ~a~~~~~~~-~~v~~~v~~~~~~~--~-------------------------------------------~--------- 98 (145)
T PF12695_consen 74 IAANLAARN-PRVKAVVLLSPYPD--S-------------------------------------------E--------- 98 (145)
T ss_dssp HHHHHHHHS-TTESEEEEESESSG--C-------------------------------------------H---------
T ss_pred HHHHHhhhc-cceeEEEEecCccc--h-------------------------------------------h---------
Confidence 999999988 78999999998210 0 0
Q ss_pred hhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC-CceEEEEcCCCcc
Q 016141 302 KDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP-PELVFEIKGSDHA 372 (394)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~~~i~~agH~ 372 (394)
.+.. .++|+++++|++|..++.+..+.+.+.++ +.++++++|++|+
T Consensus 99 -----------------~~~~--------~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 99 -----------------DLAK--------IRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -----------------HHTT--------TTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -----------------hhhc--------cCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0000 13799999999999999999999888776 5899999999995
No 62
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.80 E-value=1.7e-17 Score=145.62 Aligned_cols=234 Identities=15% Similarity=0.098 Sum_probs=159.9
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
..+||-+||.+++..+|..+.+.|.+.|+++|.+++||+|.+..+....++-.+...-+.++|+.++++++++++|||.|
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrG 114 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRG 114 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccc
Confidence 34899999999999999999999999999999999999999998888889999999999999999999989999999999
Q ss_pred HHHHHHHHHhCCcccceEEEeecccCCCCcchHH--HHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcc
Q 016141 220 GACISYVMELFPSKVAKAVFIAATMLTSGQSALD--TISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFN 297 (394)
Q Consensus 220 g~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (394)
+-.|+.+|..+| +.++++++|+.......... .+........+ ...+. ...+...+++..-..
T Consensus 115 cenal~la~~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~---lp~~~----------~~~i~~~~y~~iG~K 179 (297)
T PF06342_consen 115 CENALQLAVTHP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDL---LPRFI----------INAIMYFYYRMIGFK 179 (297)
T ss_pred hHHHHHHHhcCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHH---hhHHH----------HHHHHHHHHHHhCee
Confidence 999999999986 77999999987654332211 11111000000 00000 000011111111122
Q ss_pred cCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC------------------
Q 016141 298 RSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP------------------ 359 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~------------------ 359 (394)
-........+...+...++....+.+.. ....++|+++++|.+|.++-.+...++...+.
T Consensus 180 V~~GeeA~na~r~m~~~df~~q~~~I~~--ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~k 257 (297)
T PF06342_consen 180 VSDGEEAINAMRSMQNCDFEEQKEYIDK--LNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPK 257 (297)
T ss_pred ecChHHHHHHHHHHHhcCHHHHHHHHHH--hccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHH
Confidence 2223333334444444444444444332 22234899999999999987666555543321
Q ss_pred ---------CceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 360 ---------PELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 360 ---------~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
...-+.+.+.||+.+-.+++-+++.+...++
T Consensus 258 I~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 258 ILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 1123455667999999999999998887763
No 63
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.79 E-value=1.1e-17 Score=178.77 Aligned_cols=251 Identities=13% Similarity=0.077 Sum_probs=147.9
Q ss_pred CCCceEEEEcCCCCchhcHHHH-----HHHHHhCCcEEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHH---hCCC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKT-----MTLLKESGFKVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNE---LGNE 208 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~-----~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~---l~~~ 208 (394)
..+++|||+||++.+...|+.. ++.|.++||+|+++|+ |.++.+.. ...++.+++..+.+.++. +..+
T Consensus 65 ~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~ 141 (994)
T PRK07868 65 PVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGR 141 (994)
T ss_pred CCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCC
Confidence 3568999999999999999865 8899999999999994 56554322 235777777777766665 3444
Q ss_pred CcEEEEEeChHHHHHHHHHHhC-CcccceEEEeecccCCCCc---chHHH------------HHhhcCchHH-H------
Q 016141 209 EKVILVGHDFGGACISYVMELF-PSKVAKAVFIAATMLTSGQ---SALDT------------ISQQMGSNDL-M------ 265 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~lVli~~~~~~~~~---~~~~~------------~~~~~~~~~~-~------ 265 (394)
+++|+||||||.+++.+++.+ +++|+++|+++++...... ..... +......... .
T Consensus 142 -~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 220 (994)
T PRK07868 142 -DVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQM 220 (994)
T ss_pred -ceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHh
Confidence 899999999999999888755 5689999999887543211 10000 0000011000 0
Q ss_pred -------HHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccc--cCCcc-cccccccCCCCCCCcCE
Q 016141 266 -------QQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRP--IPFAP-VLEKLSVSDDNYGSVPR 335 (394)
Q Consensus 266 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~i~~~~~~~~~~Pv 335 (394)
.....+.............+....+....-+..............+.. ..... ..-.-....+..+++|+
T Consensus 221 l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~ 300 (994)
T PRK07868 221 LDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPV 300 (994)
T ss_pred cChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCE
Confidence 000000000000000000000011111110000000000001111100 00000 00000011245667999
Q ss_pred EEEecCCCCCCChHHHHHHHHhCCCceE-EEEcCCCccCccc---ChHHHHHHHHHHHhhh
Q 016141 336 FYIKTLQDCAIPVSVQEAMINSNPPELV-FEIKGSDHAPFFS---KPRALHRILVEISKIT 392 (394)
Q Consensus 336 Lii~G~~D~~vp~~~~~~l~~~~~~~~~-~~i~~agH~~~~e---~p~~v~~~i~~fl~~~ 392 (394)
|+|+|++|.++|++..+.+.+.+++.++ .+++++||+.++- -++++...|.+||+++
T Consensus 301 L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 301 LAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred EEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 9999999999999999999999999987 6889999998765 4788999999999865
No 64
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=4e-17 Score=141.50 Aligned_cols=191 Identities=16% Similarity=0.168 Sum_probs=132.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH-hCCCCcEEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE-LGNEEKVILVG 215 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~lvG 215 (394)
...++|+++||...+......+...|.. -+++|+.+|+.|+|.|.+.+.+....+ .++.+.++|+. .|.+++++|+|
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~-Di~avye~Lr~~~g~~~~Iil~G 136 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYA-DIKAVYEWLRNRYGSPERIILYG 136 (258)
T ss_pred ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchh-hHHHHHHHHHhhcCCCceEEEEE
Confidence 3458999999997777655555555655 269999999999999998775543333 33334444433 33345999999
Q ss_pred eChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHh
Q 016141 216 HDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLL 295 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (394)
+|+|....+.+|.+.| ++++||.+|..... +.++.... ....
T Consensus 137 ~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~----------------------rv~~~~~~--------------~~~~ 178 (258)
T KOG1552|consen 137 QSIGTVPTVDLASRYP--LAAVVLHSPFTSGM----------------------RVAFPDTK--------------TTYC 178 (258)
T ss_pred ecCCchhhhhHhhcCC--cceEEEeccchhhh----------------------hhhccCcc--------------eEEe
Confidence 9999999999999998 99999999975310 00000000 0000
Q ss_pred cccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCc-eEEEEcCCCccCc
Q 016141 296 FNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPE-LVFEIKGSDHAPF 374 (394)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~~agH~~~ 374 (394)
+ +..... ...+.+++|+|++||++|.+++..+...+.+..++. +-.++.|+||.-.
T Consensus 179 ~------------------d~f~~i-----~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~ 235 (258)
T KOG1552|consen 179 F------------------DAFPNI-----EKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDI 235 (258)
T ss_pred e------------------cccccc-----CcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCccc
Confidence 0 000001 122344799999999999999999999999999874 8888999999876
Q ss_pred ccChHHHHHHHHHHHhh
Q 016141 375 FSKPRALHRILVEISKI 391 (394)
Q Consensus 375 ~e~p~~v~~~i~~fl~~ 391 (394)
.-. .++.+.+..|+..
T Consensus 236 ~~~-~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 236 ELY-PEYIEHLRRFISS 251 (258)
T ss_pred ccC-HHHHHHHHHHHHH
Confidence 544 4677888888753
No 65
>PRK11460 putative hydrolase; Provisional
Probab=99.74 E-value=1.2e-16 Score=142.56 Aligned_cols=176 Identities=13% Similarity=0.040 Sum_probs=119.7
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCC----------CCCcc---CHHHHHHHHHHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCD----------TNSIT---SLEQYVKPLIDTFN 203 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~----------~~~~~---~~~~~~~~~~~~l~ 203 (394)
....++||++||+|++...|..+++.|...++.+..++.+|....... ..... .+.+..+.+.++++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~ 92 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVR 92 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999877655556666665322100 00111 12232333333333
Q ss_pred ----HhCCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCC
Q 016141 204 ----ELGNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQ 278 (394)
Q Consensus 204 ----~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (394)
..+++ ++++|+|||+||.+++.++.++|+.+.++|.+++.....
T Consensus 93 ~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~~------------------------------- 141 (232)
T PRK11460 93 YWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYASL------------------------------- 141 (232)
T ss_pred HHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccccc-------------------------------
Confidence 33432 489999999999999999999998888887766531100
Q ss_pred CCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC
Q 016141 279 NPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN 358 (394)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~ 358 (394)
. .. . ..+.|++++||++|.++|.+..+.+.+.+
T Consensus 142 -----~------------~~----------------------~--------~~~~pvli~hG~~D~vvp~~~~~~~~~~L 174 (232)
T PRK11460 142 -----P------------ET----------------------A--------PTATTIHLIHGGEDPVIDVAHAVAAQEAL 174 (232)
T ss_pred -----c------------cc----------------------c--------cCCCcEEEEecCCCCccCHHHHHHHHHHH
Confidence 0 00 0 01389999999999999999888777655
Q ss_pred C----CceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 359 P----PELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 359 ~----~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
. ++++++++++||.+..+.-+.+.+.|.+++.
T Consensus 175 ~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~ 210 (232)
T PRK11460 175 ISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVP 210 (232)
T ss_pred HHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcc
Confidence 3 4688889999999976666666666666654
No 66
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.73 E-value=7.9e-17 Score=145.40 Aligned_cols=104 Identities=16% Similarity=0.172 Sum_probs=87.0
Q ss_pred CceEEEEcCCCCch----hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHH---HhCCCCcEE
Q 016141 140 TSHFVLVHGGGFGA----WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN---ELGNEEKVI 212 (394)
Q Consensus 140 ~~~vvl~HG~~~~~----~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~---~l~~~~~~~ 212 (394)
.++|||+||++... ..|..+++.|+++||.|+++|+||||.|..... ..+++++++|+..+++ +.+.. +++
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~-~~~~~~~~~Dv~~ai~~L~~~~~~-~v~ 102 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFA-AARWDVWKEDVAAAYRWLIEQGHP-PVT 102 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccc-cCCHHHHHHHHHHHHHHHHhcCCC-CEE
Confidence 57899999998643 457778899999999999999999999976543 3578888888776554 44555 999
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 213 LVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
|+||||||.+++.+|.++|+.++++|+++|...
T Consensus 103 LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 103 LWGLRLGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred EEEECHHHHHHHHHHHhCccccceEEEeccccc
Confidence 999999999999999999999999999998654
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.72 E-value=4.3e-16 Score=139.60 Aligned_cols=242 Identities=17% Similarity=0.126 Sum_probs=133.6
Q ss_pred CCCCceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcE
Q 016141 137 SPETSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKV 211 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~ 211 (394)
...+|.||++||+.++... -..++..+.++||.|+++++|||+.+.......++.- +.+|+..+++.+ ....++
T Consensus 72 ~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G-~t~D~~~~l~~l~~~~~~r~~ 150 (345)
T COG0429 72 AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSG-ETEDIRFFLDWLKARFPPRPL 150 (345)
T ss_pred ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceeccc-chhHHHHHHHHHHHhCCCCce
Confidence 4567899999999665543 4678889999999999999999999865332222211 114555555444 455699
Q ss_pred EEEEeChHH-HHHHHHHHhCCc-ccceEEEeecccCCCC------cchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCc
Q 016141 212 ILVGHDFGG-ACISYVMELFPS-KVAKAVFIAATMLTSG------QSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTS 283 (394)
Q Consensus 212 ~lvGhS~Gg-~~a~~~a~~~p~-~v~~lVli~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (394)
..||.|+|| +++..++..-.+ .+.+.+.++.+..... ..+...+........+.+.............+...
T Consensus 151 ~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~ 230 (345)
T COG0429 151 YAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTV 230 (345)
T ss_pred EEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHH
Confidence 999999999 566655554222 3556666555432210 00110111111111111111111111101111110
Q ss_pred chhhHHHHHHH---h-cccC---CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHH
Q 016141 284 IDLDRTLLRDL---L-FNRS---AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMIN 356 (394)
Q Consensus 284 ~~~~~~~~~~~---~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~ 356 (394)
...++.+ . ++.. +.........+++...-...+ ..+++|+|||+..+|++++++.......
T Consensus 231 ----~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L--------~~Ir~PtLii~A~DDP~~~~~~iP~~~~ 298 (345)
T COG0429 231 ----LAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLL--------PKIRKPTLIINAKDDPFMPPEVIPKLQE 298 (345)
T ss_pred ----HHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccc--------cccccceEEEecCCCCCCChhhCCcchh
Confidence 1111100 0 0000 000011111122222223333 3446999999999999999988877766
Q ss_pred -hCCCceEEEEcCCCccCccc----ChH-HHHHHHHHHHhh
Q 016141 357 -SNPPELVFEIKGSDHAPFFS----KPR-ALHRILVEISKI 391 (394)
Q Consensus 357 -~~~~~~~~~i~~agH~~~~e----~p~-~v~~~i~~fl~~ 391 (394)
..|++.+.+.+.+||..++. +|. -..+.+.+|++.
T Consensus 299 ~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 299 MLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 77889999999999998887 443 456677777753
No 68
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.71 E-value=3.1e-16 Score=131.09 Aligned_cols=221 Identities=16% Similarity=0.156 Sum_probs=142.5
Q ss_pred CccCCCCCceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCc
Q 016141 133 PKIESPETSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEK 210 (394)
Q Consensus 133 ~~~~~~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 210 (394)
.....++...||++||+-++... ...++..|.+.|+.++.+|++|.|.|.+.-. .-.....++|+..++.++.-..+
T Consensus 26 ~lh~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~-~Gn~~~eadDL~sV~q~~s~~nr 104 (269)
T KOG4667|consen 26 LLHETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY-YGNYNTEADDLHSVIQYFSNSNR 104 (269)
T ss_pred ceeccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc-cCcccchHHHHHHHHHHhccCce
Confidence 34456778899999999777654 5678889999999999999999999986432 22344555899999888743212
Q ss_pred --EEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCC-----c
Q 016141 211 --VILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPT-----S 283 (394)
Q Consensus 211 --~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 283 (394)
-+++|||-||-+++.+|.++.+ +.-+|-+++-..... .+... +.+....+....++..... .
T Consensus 105 ~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~-----~I~eR-----lg~~~l~~ike~Gfid~~~rkG~y~ 173 (269)
T KOG4667|consen 105 VVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN-----GINER-----LGEDYLERIKEQGFIDVGPRKGKYG 173 (269)
T ss_pred EEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc-----chhhh-----hcccHHHHHHhCCceecCcccCCcC
Confidence 3689999999999999999987 777777666443211 11111 1111122222222221111 1
Q ss_pred chhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceE
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELV 363 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~ 363 (394)
..+..+-+.+.+ ..+..+...+++ .+||||-+||..|.+||.+.+..+++.+++-++
T Consensus 174 ~rvt~eSlmdrL-----------------ntd~h~aclkId------~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~L 230 (269)
T KOG4667|consen 174 YRVTEESLMDRL-----------------NTDIHEACLKID------KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHKL 230 (269)
T ss_pred ceecHHHHHHHH-----------------hchhhhhhcCcC------ccCceEEEeccCCceeechhHHHHHHhccCCce
Confidence 111111111111 111111111222 269999999999999999999999999999999
Q ss_pred EEEcCCCccCcccChHHHHHHHHHHH
Q 016141 364 FEIKGSDHAPFFSKPRALHRILVEIS 389 (394)
Q Consensus 364 ~~i~~agH~~~~e~p~~v~~~i~~fl 389 (394)
.++||+.|.....+ .++......|.
T Consensus 231 ~iIEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 231 EIIEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred EEecCCCcCccchh-hhHhhhcceeE
Confidence 99999999876544 34445555443
No 69
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.71 E-value=3.6e-16 Score=134.74 Aligned_cols=227 Identities=14% Similarity=0.083 Sum_probs=145.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
..+..++++|-.|+++..|..|...|... +.++++++||+|.--..+ ...+++++++.+..-+...-.+.++.++|||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~~-iel~avqlPGR~~r~~ep-~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPAD-IELLAVQLPGRGDRFGEP-LLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCch-hheeeecCCCcccccCCc-ccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 34568999999999999999999988875 999999999999775443 5679999999998888742233599999999
Q ss_pred hHHHHHHHHHHhCCc---ccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHH
Q 016141 218 FGGACISYVMELFPS---KVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDL 294 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~---~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (394)
|||++|.++|.+... .+.++.+.+...+.... ...+. ......+++....+ .+.. +. ...+.++ ..+
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~--~~~i~-~~~D~~~l~~l~~l---gG~p--~e-~led~El-~~l 152 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPHYDR--GKQIH-HLDDADFLADLVDL---GGTP--PE-LLEDPEL-MAL 152 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcc--cCCcc-CCCHHHHHHHHHHh---CCCC--hH-HhcCHHH-HHH
Confidence 999999999986422 25666666654431110 00000 00111122211111 1100 00 0001111 111
Q ss_pred hcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC-CceEEEEcCCCccC
Q 016141 295 LFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP-PELVFEIKGSDHAP 373 (394)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~~~i~~agH~~ 373 (394)
+.... ..+.. ..+.+........+||+.++.|++|..+..+....+.+... ..++.+++| ||+.
T Consensus 153 ~LPil-RAD~~-------------~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFf 217 (244)
T COG3208 153 FLPIL-RADFR-------------ALESYRYPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDG-GHFF 217 (244)
T ss_pred HHHHH-HHHHH-------------HhcccccCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecC-ccee
Confidence 10000 00000 01111111122336999999999999999999998888876 589999995 9999
Q ss_pred cccChHHHHHHHHHHHhh
Q 016141 374 FFSKPRALHRILVEISKI 391 (394)
Q Consensus 374 ~~e~p~~v~~~i~~fl~~ 391 (394)
..++.+++.+.|.+.++.
T Consensus 218 l~~~~~~v~~~i~~~l~~ 235 (244)
T COG3208 218 LNQQREEVLARLEQHLAH 235 (244)
T ss_pred hhhhHHHHHHHHHHHhhh
Confidence 999999999999998864
No 70
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.69 E-value=4e-16 Score=137.75 Aligned_cols=196 Identities=15% Similarity=0.141 Sum_probs=115.7
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHHhCCC-CcEEEEEeChHHHHHHHHH
Q 016141 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCD-------TNSITSLEQYVKPLIDTFNELGNE-EKVILVGHDFGGACISYVM 227 (394)
Q Consensus 156 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a 227 (394)
|......|+++||.|+.+|+||.+..... ......++|..+.+..+++.-.++ +++.++|||+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 44567789999999999999998843211 111223334443333333332221 4999999999999999999
Q ss_pred HhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHH
Q 016141 228 ELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELA 307 (394)
Q Consensus 228 ~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
.++|+.++++|..++............ . .... . .... ............
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~-----~----~~~~-~--------------------~~~~-~~~~~~~~~~~~ 131 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTD-----I----YTKA-E--------------------YLEY-GDPWDNPEFYRE 131 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTC-----C----HHHG-H--------------------HHHH-SSTTTSHHHHHH
T ss_pred cccceeeeeeeccceecchhccccccc-----c----cccc-c--------------------cccc-Cccchhhhhhhh
Confidence 999999999999998764332111000 0 0000 0 0000 000001111111
Q ss_pred HHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----CCceEEEEcCCCccCc-ccChHHHH
Q 016141 308 LISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN----PPELVFEIKGSDHAPF-FSKPRALH 382 (394)
Q Consensus 308 ~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~----~~~~~~~i~~agH~~~-~e~p~~v~ 382 (394)
...... ...+. .++|+|++||++|..||+..+..+.+.+ .+.+++++|++||.+. .+...++.
T Consensus 132 ~s~~~~------~~~~~------~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~ 199 (213)
T PF00326_consen 132 LSPISP------ADNVQ------IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWY 199 (213)
T ss_dssp HHHGGG------GGGCG------GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHH
T ss_pred hccccc------ccccc------CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHH
Confidence 111100 01100 2599999999999999998877766554 3589999999999655 34556888
Q ss_pred HHHHHHHhhhcC
Q 016141 383 RILVEISKITHR 394 (394)
Q Consensus 383 ~~i~~fl~~~~k 394 (394)
+.+.+|++++.|
T Consensus 200 ~~~~~f~~~~l~ 211 (213)
T PF00326_consen 200 ERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHcC
Confidence 999999998753
No 71
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.68 E-value=4e-16 Score=130.50 Aligned_cols=201 Identities=12% Similarity=0.135 Sum_probs=137.1
Q ss_pred CCCCCceEEEEcCCCCchhcHHHHHHHH-HhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC----C-CC
Q 016141 136 ESPETSHFVLVHGGGFGAWCWYKTMTLL-KESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG----N-EE 209 (394)
Q Consensus 136 ~~~~~~~vvl~HG~~~~~~~~~~~~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~----~-~~ 209 (394)
+..+.|+++++||..++-...-..+..+ ..-+.+|+.+++||+|.|.+.+.+ +.+.-|-.++++++- . +.
T Consensus 74 ~E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE----~GL~lDs~avldyl~t~~~~dkt 149 (300)
T KOG4391|consen 74 SESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSE----EGLKLDSEAVLDYLMTRPDLDKT 149 (300)
T ss_pred ccCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccc----cceeccHHHHHHHHhcCccCCcc
Confidence 4458899999999999988887777654 444799999999999999876532 222333444555541 1 24
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHH
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (394)
+++|+|.|+||++|+.+|++.-+++.++|+-+.....+.... ... ..-..+....+.+.+
T Consensus 150 kivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i-----~~v-~p~~~k~i~~lc~kn-------------- 209 (300)
T KOG4391|consen 150 KIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAI-----PLV-FPFPMKYIPLLCYKN-------------- 209 (300)
T ss_pred eEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhh-----hee-ccchhhHHHHHHHHh--------------
Confidence 899999999999999999999999999999887653211000 000 000000000000000
Q ss_pred HHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCC--ceEEEEc
Q 016141 290 LLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPP--ELVFEIK 367 (394)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~--~~~~~i~ 367 (394)
.+ .. .... ...++|.|+|.|.+|.+||+-+.+.+.+..|. .++..+|
T Consensus 210 ----~~----------------~S---~~ki--------~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP 258 (300)
T KOG4391|consen 210 ----KW----------------LS---YRKI--------GQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFP 258 (300)
T ss_pred ----hh----------------cc---hhhh--------ccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCC
Confidence 00 00 0000 11259999999999999999999999999874 7899999
Q ss_pred CCCccCcccChHHHHHHHHHHHhhh
Q 016141 368 GSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 368 ~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
++.|.-.+-. +-+.++|.+||.+.
T Consensus 259 ~gtHNDT~i~-dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 259 DGTHNDTWIC-DGYFQAIEDFLAEV 282 (300)
T ss_pred CCccCceEEe-ccHHHHHHHHHHHh
Confidence 9999755443 56788999998764
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.68 E-value=9.4e-16 Score=155.63 Aligned_cols=208 Identities=15% Similarity=0.152 Sum_probs=134.0
Q ss_pred ceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCC---C----CCCccCHHHHHHHHHHHHHHhCCC--C
Q 016141 141 SHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSC---D----TNSITSLEQYVKPLIDTFNELGNE--E 209 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~---~----~~~~~~~~~~~~~~~~~l~~l~~~--~ 209 (394)
|+||++||.+..... |....+.|+.+||.|+.+|.||.+.-.. . ......++|+.+.+. ++...+.- +
T Consensus 395 P~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ 473 (620)
T COG1506 395 PLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPE 473 (620)
T ss_pred CEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChH
Confidence 899999999766555 6677889999999999999997654211 1 113346677766666 66665432 4
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHH
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRT 289 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (394)
++.|+|||+||++++.++.+.| .+++.|...+..... ..+... ...+..
T Consensus 474 ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~-----~~~~~~--~~~~~~----------------------- 522 (620)
T COG1506 474 RIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWL-----LYFGES--TEGLRF----------------------- 522 (620)
T ss_pred HeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhh-----hhcccc--chhhcC-----------------------
Confidence 8999999999999999999887 677776666543210 000000 000000
Q ss_pred HHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----CCceEEE
Q 016141 290 LLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN----PPELVFE 365 (394)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~----~~~~~~~ 365 (394)
.............. .............+++|+|+|||++|..||.+.+..+.+.+ ..+++++
T Consensus 523 ~~~~~~~~~~~~~~--------------~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~ 588 (620)
T COG1506 523 DPEENGGGPPEDRE--------------KYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVV 588 (620)
T ss_pred CHHHhCCCcccChH--------------HHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEE
Confidence 00000000000000 00111111122334699999999999999999888777655 3579999
Q ss_pred EcCCCccCcc-cChHHHHHHHHHHHhhhcC
Q 016141 366 IKGSDHAPFF-SKPRALHRILVEISKITHR 394 (394)
Q Consensus 366 i~~agH~~~~-e~p~~v~~~i~~fl~~~~k 394 (394)
+|+.||.+.. ++-..+.+.+.+|++++.+
T Consensus 589 ~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~ 618 (620)
T COG1506 589 FPDEGHGFSRPENRVKVLKEILDWFKRHLK 618 (620)
T ss_pred eCCCCcCCCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999876 4567788999999988753
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.68 E-value=7.3e-15 Score=134.81 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=78.0
Q ss_pred CCceEEEEcCCCCchhcHHHH--HHHH-HhCCcEEEEecC--CCCCCCCCC-------------------CCCccCHHH-
Q 016141 139 ETSHFVLVHGGGFGAWCWYKT--MTLL-KESGFKVDAVDL--TGSGVSSCD-------------------TNSITSLEQ- 193 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~--~~~l-~~~g~~v~~~d~--~G~G~s~~~-------------------~~~~~~~~~- 193 (394)
..|+|||+||++++...|... +..+ .+.||.|++||. +|+|.+... ....+...+
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 468999999999998888542 3344 456999999998 555533210 001123333
Q ss_pred HHHHHHHHHHH---hCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 194 YVKPLIDTFNE---LGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 194 ~~~~~~~~l~~---l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+++++..+++. ++.+ +++++||||||++|+.++.++|+.+++++++++...
T Consensus 121 ~~~~l~~~~~~~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFPLDGE-RQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCCCCCC-ceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 46778888876 2444 899999999999999999999999999999988754
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.68 E-value=4.2e-15 Score=136.81 Aligned_cols=107 Identities=16% Similarity=0.187 Sum_probs=77.4
Q ss_pred CCCceEEEEcCCCCchhcHHH---HHHHHHhCCcEEEEecCCCCCC-----CCC-------------CCC-----C--cc
Q 016141 138 PETSHFVLVHGGGFGAWCWYK---TMTLLKESGFKVDAVDLTGSGV-----SSC-------------DTN-----S--IT 189 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~---~~~~l~~~g~~v~~~d~~G~G~-----s~~-------------~~~-----~--~~ 189 (394)
...|+|+|+||++++...|.. +...+...|+.|+.+|..++|. +.. ... . .+
T Consensus 45 ~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T PLN02442 45 GKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDY 124 (283)
T ss_pred CCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhh
Confidence 456899999999988877744 4466677799999999887661 100 000 0 11
Q ss_pred CHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 190 SLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 190 ~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
-.+++.+.+...++.++.+ +++|+||||||+.|+.++.++|+++++++.+++...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 1333444444445556666 899999999999999999999999999999998754
No 75
>PLN00021 chlorophyllase
Probab=99.65 E-value=8.2e-15 Score=135.83 Aligned_cols=106 Identities=16% Similarity=0.118 Sum_probs=77.8
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH-------hCCCC
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE-------LGNEE 209 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~-------l~~~~ 209 (394)
.+..|+|||+||++.+...|..+++.|+++||.|+++|++|++.... .....+..+..+++.+.++. .+.+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~-~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~- 126 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDG-TDEIKDAAAVINWLSSGLAAVLPEGVRPDLS- 126 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCc-hhhHHHHHHHHHHHHhhhhhhcccccccChh-
Confidence 35568999999999999999999999999999999999999754321 11111222223333332222 2234
Q ss_pred cEEEEEeChHHHHHHHHHHhCCc-----ccceEEEeeccc
Q 016141 210 KVILVGHDFGGACISYVMELFPS-----KVAKAVFIAATM 244 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lVli~~~~ 244 (394)
+++|+|||+||.+|+.+|..+++ ++.++|+++|..
T Consensus 127 ~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 127 KLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred heEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 89999999999999999998874 578999998864
No 76
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=2.5e-14 Score=130.49 Aligned_cols=252 Identities=16% Similarity=0.192 Sum_probs=152.3
Q ss_pred CCCceEEEEcCCCCchhc-----------HHHHH---HHHHhCCcEEEEecCCCCC-CCCCCCC------------CccC
Q 016141 138 PETSHFVLVHGGGFGAWC-----------WYKTM---TLLKESGFKVDAVDLTGSG-VSSCDTN------------SITS 190 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-----------~~~~~---~~l~~~g~~v~~~d~~G~G-~s~~~~~------------~~~~ 190 (394)
....+||++||+.++... |..++ ..+.-..|.||++|-.|.+ .|+.|.. ...+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 445799999999886544 33333 1233334999999999887 4443321 3468
Q ss_pred HHHHHHHHHHHHHHhCCCCcEE-EEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcch-HHH-----HHhhcCc--
Q 016141 191 LEQYVKPLIDTFNELGNEEKVI-LVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSA-LDT-----ISQQMGS-- 261 (394)
Q Consensus 191 ~~~~~~~~~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~-~~~-----~~~~~~~-- 261 (394)
+.|+++.-..++++||++ ++. +||-||||+.|+.++..||++|..+|.+++.....+... +.. +.....+
T Consensus 129 i~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~ 207 (368)
T COG2021 129 IRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNG 207 (368)
T ss_pred HHHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccC
Confidence 899999888999999999 655 999999999999999999999999999998765443211 111 1111111
Q ss_pred ---------hHHHHHHHHHHHhcCC---------CC----CCCcc---hhhH-HHHH---HHhcccCCchhHHHHHHhcc
Q 016141 262 ---------NDLMQQAQIFLYANGK---------QN----PPTSI---DLDR-TLLR---DLLFNRSAAKDVELALISMR 312 (394)
Q Consensus 262 ---------~~~~~~~~~~~~~~~~---------~~----~~~~~---~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~ 312 (394)
..-++........... .. .+... .+.. ..+. +.+....+...+......+.
T Consensus 208 G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald 287 (368)
T COG2021 208 GDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALD 287 (368)
T ss_pred CCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHH
Confidence 0111111111111000 00 00000 0011 1111 11111122222222222222
Q ss_pred ccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCce-EEEEc-CCCccCcccChHHHHHHHHHHHh
Q 016141 313 PIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPEL-VFEIK-GSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 313 ~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~-~~~i~-~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
..+.......+ ...+..+++|+|++.-+.|...|++..+.+.+.++... +++++ ..||..++...+.+...|.+||+
T Consensus 288 ~~D~s~~~~~l-~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~ 366 (368)
T COG2021 288 YHDVSRGRGDL-TAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLA 366 (368)
T ss_pred hcCCCCCcCcH-HHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhh
Confidence 22222211000 11133457999999999999999999999999998766 65554 56999999999999999999997
Q ss_pred h
Q 016141 391 I 391 (394)
Q Consensus 391 ~ 391 (394)
.
T Consensus 367 ~ 367 (368)
T COG2021 367 L 367 (368)
T ss_pred c
Confidence 4
No 77
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.62 E-value=3.5e-14 Score=125.25 Aligned_cols=108 Identities=16% Similarity=0.122 Sum_probs=76.0
Q ss_pred CCCceEEEEcCCCCchhcHH---HHHHHHHhCCcEEEEecCCCCCCCCCCCC---------CccCHHHHHHHHHHHHHHh
Q 016141 138 PETSHFVLVHGGGFGAWCWY---KTMTLLKESGFKVDAVDLTGSGVSSCDTN---------SITSLEQYVKPLIDTFNEL 205 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~l~~l 205 (394)
+..|+||++||.+.+...|. .+...+.+.||.|+++|.+|++.+..... ......++.+.+..+.+..
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 90 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANY 90 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhc
Confidence 45689999999998887765 35555666799999999999875432100 0111222222222233333
Q ss_pred CCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 206 GNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 206 ~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 91 ~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 91 SIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred CcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 333 4899999999999999999999999999999887654
No 78
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.59 E-value=7.4e-13 Score=116.31 Aligned_cols=242 Identities=15% Similarity=0.107 Sum_probs=158.9
Q ss_pred CCceEEEEcCCCCchhc-HHHH-----HHHHHhCCcEEEEecCCCCCCCC--CCCC-CccCHHHHHHHHHHHHHHhCCCC
Q 016141 139 ETSHFVLVHGGGFGAWC-WYKT-----MTLLKESGFKVDAVDLTGSGVSS--CDTN-SITSLEQYVKPLIDTFNELGNEE 209 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~-~~~~-----~~~l~~~g~~v~~~d~~G~G~s~--~~~~-~~~~~~~~~~~~~~~l~~l~~~~ 209 (394)
++|++|=.|..|.+... |..+ +..+.++ |.|+-+|.|||-.-. .+.+ ...++++++++|..++++++++
T Consensus 45 ~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk- 122 (326)
T KOG2931|consen 45 NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLK- 122 (326)
T ss_pred CCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcc-
Confidence 57899999999988765 6554 4566777 999999999996443 3333 4679999999999999999998
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcC-----chHHHHHHHHHHHhcCCCCCCCc-
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMG-----SNDLMQQAQIFLYANGKQNPPTS- 283 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~- 283 (394)
.|+-+|.-.|++|..++|..||++|.++||+++.....+ |.++...... ...+......++....+......
T Consensus 123 ~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~g--wiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~ 200 (326)
T KOG2931|consen 123 SVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKG--WIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN 200 (326)
T ss_pred eEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCch--HHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc
Confidence 999999999999999999999999999999998765443 3333322221 11122222223222222111111
Q ss_pred chhhHHHHHHHhcccCCchhHHHHHHhc-cccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--C
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVELALISM-RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--P 360 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~ 360 (394)
.......++..+...............+ ...++......... ..+||+|++.|+..+.+ +....+...+. +
T Consensus 201 ~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~----tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ 274 (326)
T KOG2931|consen 201 NSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGT----TLKCPVLLVVGDNSPHV--SAVVECNSKLDPTY 274 (326)
T ss_pred cHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCc----cccccEEEEecCCCchh--hhhhhhhcccCccc
Confidence 1111223333443433434443333332 22232222222110 33699999999987754 33344555442 4
Q ss_pred ceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 361 ELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 361 ~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
..+..+.++|-.+..++|..+++.+.-|++
T Consensus 275 ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 275 TTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 788899999999999999999999999986
No 79
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.59 E-value=1.5e-13 Score=113.56 Aligned_cols=174 Identities=16% Similarity=0.146 Sum_probs=124.6
Q ss_pred CCCceEEEEcCCC-----CchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCc-E
Q 016141 138 PETSHFVLVHGGG-----FGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEK-V 211 (394)
Q Consensus 138 ~~~~~vvl~HG~~-----~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~ 211 (394)
...|..|++|.-+ .+...-..++..|.+.||.++.||+||.|.|.+..+....-.+.+..+.+++.....+.+ +
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 5567888888542 222335667788999999999999999999998766444444444555566666655433 3
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHH
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLL 291 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (394)
.|.|+|+|++|++.+|.+.|+ ....|.+.+.....
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~~-------------------------------------------- 140 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINAY-------------------------------------------- 140 (210)
T ss_pred hhcccchHHHHHHHHHHhccc-ccceeeccCCCCch--------------------------------------------
Confidence 689999999999999999876 55555555443100
Q ss_pred HHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCc
Q 016141 292 RDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDH 371 (394)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH 371 (394)
+.. .+... .+|.++|+|+.|.++.....-.+++. ...+++++++++|
T Consensus 141 -dfs-----------------------~l~P~--------P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~H 187 (210)
T COG2945 141 -DFS-----------------------FLAPC--------PSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADH 187 (210)
T ss_pred -hhh-----------------------hccCC--------CCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCc
Confidence 000 00011 37899999999999998887777777 4678999999999
Q ss_pred cCcccChHHHHHHHHHHHh
Q 016141 372 APFFSKPRALHRILVEISK 390 (394)
Q Consensus 372 ~~~~e~p~~v~~~i~~fl~ 390 (394)
|++ .+-+.+.+.|.+|+.
T Consensus 188 FF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 188 FFH-GKLIELRDTIADFLE 205 (210)
T ss_pred eec-ccHHHHHHHHHHHhh
Confidence 986 455789999999985
No 80
>PRK10162 acetyl esterase; Provisional
Probab=99.59 E-value=2.4e-13 Score=127.26 Aligned_cols=220 Identities=15% Similarity=0.099 Sum_probs=124.0
Q ss_pred CCCceEEEEcCCC---CchhcHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC-CcEE
Q 016141 138 PETSHFVLVHGGG---FGAWCWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE-EKVI 212 (394)
Q Consensus 138 ~~~~~vvl~HG~~---~~~~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~ 212 (394)
...|+||++||.+ ++...|..++..|++ .|+.|+.+|+|.......+. ...+..+..+.+.+..+.++++ ++++
T Consensus 79 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~-~~~D~~~a~~~l~~~~~~~~~d~~~i~ 157 (318)
T PRK10162 79 DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ-AIEEIVAVCCYFHQHAEDYGINMSRIG 157 (318)
T ss_pred CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC-cHHHHHHHHHHHHHhHHHhCCChhHEE
Confidence 3468999999977 455678888888887 49999999999765433222 1122223333444444556653 4899
Q ss_pred EEEeChHHHHHHHHHHhC------CcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchh
Q 016141 213 LVGHDFGGACISYVMELF------PSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDL 286 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~------p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (394)
|+|+|+||.+|+.++.+. +.++.++|++.+.............. .. .......
T Consensus 158 l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~~~~------------------~~---~~~l~~~ 216 (318)
T PRK10162 158 FAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVSRRLLG------------------GV---WDGLTQQ 216 (318)
T ss_pred EEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChhHHHhC------------------CC---ccccCHH
Confidence 999999999999988753 35789999998865431110000000 00 0000000
Q ss_pred hHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCCh--HHHHHHHHhCCCceEE
Q 016141 287 DRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPV--SVQEAMINSNPPELVF 364 (394)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~--~~~~~l~~~~~~~~~~ 364 (394)
....+...+........ .+. .......+ ...-.|+++++|+.|.+.+. ...+.+.+.--.++++
T Consensus 217 ~~~~~~~~y~~~~~~~~--------~p~-~~p~~~~l-----~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~ 282 (318)
T PRK10162 217 DLQMYEEAYLSNDADRE--------SPY-YCLFNNDL-----TRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFK 282 (318)
T ss_pred HHHHHHHHhCCCccccC--------Ccc-cCcchhhh-----hcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEE
Confidence 11111111111100000 000 00000000 01126999999999998753 2234444444468999
Q ss_pred EEcCCCccCccc-----ChHHHHHHHHHHHhhhc
Q 016141 365 EIKGSDHAPFFS-----KPRALHRILVEISKITH 393 (394)
Q Consensus 365 ~i~~agH~~~~e-----~p~~v~~~i~~fl~~~~ 393 (394)
+++|..|.+... ..++..+.+.+||++..
T Consensus 283 ~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~ 316 (318)
T PRK10162 283 LYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQL 316 (318)
T ss_pred EECCCceehhhccCchHHHHHHHHHHHHHHHHHh
Confidence 999999976533 23466777788887653
No 81
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.58 E-value=6e-14 Score=124.10 Aligned_cols=179 Identities=18% Similarity=0.171 Sum_probs=107.4
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHH-HHHhCCcEEEEecCCC------CCC---CCCC-----CCC---ccCHHHHHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMT-LLKESGFKVDAVDLTG------SGV---SSCD-----TNS---ITSLEQYVKPL 198 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~-~l~~~g~~v~~~d~~G------~G~---s~~~-----~~~---~~~~~~~~~~~ 198 (394)
....++|||+||+|.+...|..+.. .+......++.++-|- .|. +..+ ... ...+++.++.+
T Consensus 11 ~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l 90 (216)
T PF02230_consen 11 GKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERL 90 (216)
T ss_dssp ST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHH
T ss_pred CCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHH
Confidence 4567899999999999977776655 2233357777775441 232 2111 111 12334444455
Q ss_pred HHHHHHh---CCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHh
Q 016141 199 IDTFNEL---GNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYA 274 (394)
Q Consensus 199 ~~~l~~l---~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (394)
.++++.. +++ ++++|+|+|.||++|+.++.++|+.+.++|.+++........
T Consensus 91 ~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~------------------------ 146 (216)
T PF02230_consen 91 DELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL------------------------ 146 (216)
T ss_dssp HHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC------------------------
T ss_pred HHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc------------------------
Confidence 5666543 222 489999999999999999999999999999999875321100
Q ss_pred cCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHH
Q 016141 275 NGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAM 354 (394)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l 354 (394)
....... .++|++++||++|.++|.+..+..
T Consensus 147 ------------------------------------------~~~~~~~-------~~~pi~~~hG~~D~vvp~~~~~~~ 177 (216)
T PF02230_consen 147 ------------------------------------------EDRPEAL-------AKTPILIIHGDEDPVVPFEWAEKT 177 (216)
T ss_dssp ------------------------------------------HCCHCCC-------CTS-EEEEEETT-SSSTHHHHHHH
T ss_pred ------------------------------------------ccccccc-------CCCcEEEEecCCCCcccHHHHHHH
Confidence 0000000 048999999999999999877665
Q ss_pred HHhC----CCceEEEEcCCCccCcccChHHHHHHHHHHHhhh
Q 016141 355 INSN----PPELVFEIKGSDHAPFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 355 ~~~~----~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~~ 392 (394)
.+.+ .++++..++|.||.+. .+..+.+.+||+++
T Consensus 178 ~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 178 AEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp HHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 5543 4578999999999875 34556688888765
No 82
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.57 E-value=5.4e-14 Score=124.61 Aligned_cols=179 Identities=18% Similarity=0.068 Sum_probs=114.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCC-CCCCC-CCcc--------CHHHHHHHHHHHHHHhCC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGV-SSCDT-NSIT--------SLEQYVKPLIDTFNELGN 207 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~-s~~~~-~~~~--------~~~~~~~~~~~~l~~l~~ 207 (394)
+..|.||++|++.+-......++..|++.||.|+++|+-+-.. ..... .... ..+...+++.+.++.+.-
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~ 91 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRA 91 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 3578999999998877778889999999999999999865443 11111 0000 134556677666666621
Q ss_pred -----CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCC
Q 016141 208 -----EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPT 282 (394)
Q Consensus 208 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (394)
.++|.++|+|+||.+++.++.+. ..++++|..-+...... .
T Consensus 92 ~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~~~--~------------------------------- 137 (218)
T PF01738_consen 92 QPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPPPP--P------------------------------- 137 (218)
T ss_dssp TTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSGGG--H-------------------------------
T ss_pred ccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCCCc--c-------------------------------
Confidence 14999999999999999999876 57898888776110000 0
Q ss_pred cchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----
Q 016141 283 SIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN---- 358 (394)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~---- 358 (394)
. ..... +++|+++++|++|..++.+..+.+.+.+
T Consensus 138 ---------~-------------------------~~~~~--------~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~ 175 (218)
T PF01738_consen 138 ---------L-------------------------EDAPK--------IKAPVLILFGENDPFFPPEEVEALEEALKAAG 175 (218)
T ss_dssp ---------H-------------------------HHGGG----------S-EEEEEETT-TTS-HHHHHHHHHHHHCTT
T ss_pred ---------h-------------------------hhhcc--------cCCCEeecCccCCCCCChHHHHHHHHHHHhcC
Confidence 0 00011 1599999999999999998766665544
Q ss_pred CCceEEEEcCCCccCcccCh--------HHHHHHHHHHHhhh
Q 016141 359 PPELVFEIKGSDHAPFFSKP--------RALHRILVEISKIT 392 (394)
Q Consensus 359 ~~~~~~~i~~agH~~~~e~p--------~~v~~~i~~fl~~~ 392 (394)
...++++++|++|.+..... ++-.+.+.+||+++
T Consensus 176 ~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 176 VDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred CcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 56899999999998876532 34557777888765
No 83
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=4.1e-13 Score=124.91 Aligned_cols=224 Identities=15% Similarity=0.190 Sum_probs=124.5
Q ss_pred CCCceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC---CCCcEE
Q 016141 138 PETSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG---NEEKVI 212 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~~ 212 (394)
...|+||++||+.+++.. -..++..+.+.||+|++++.||+|.+.-.....++ ..+.+|+.++++++. ...++.
T Consensus 123 ~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~-ag~t~Dl~~~v~~i~~~~P~a~l~ 201 (409)
T KOG1838|consen 123 GTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFT-AGWTEDLREVVNHIKKRYPQAPLF 201 (409)
T ss_pred CCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceee-cCCHHHHHHHHHHHHHhCCCCceE
Confidence 456999999999665543 36677778888999999999999998754433222 223345555555542 335899
Q ss_pred EEEeChHHHHHHHHHHhCCcc---cceEEEeecccCCC-Cc----chHHHHHhhcCchHHH---HHHHHHHHhc-----C
Q 016141 213 LVGHDFGGACISYVMELFPSK---VAKAVFIAATMLTS-GQ----SALDTISQQMGSNDLM---QQAQIFLYAN-----G 276 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~---v~~lVli~~~~~~~-~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~ 276 (394)
.+|.||||.+...+..+..+. +.++++++|.-... .. .....+........+. ..-...+... .
T Consensus 202 avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~ 281 (409)
T KOG1838|consen 202 AVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDV 281 (409)
T ss_pred EEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhh
Confidence 999999999999998865442 45555555543210 00 0000000000000000 0000000100 0
Q ss_pred CCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHH-HHHH
Q 016141 277 KQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQ-EAMI 355 (394)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~-~~l~ 355 (394)
........+++..+....+ +.....++ +........+ ..+++|+|+|+..+|+++|++.. ....
T Consensus 282 ~~~~~SvreFD~~~t~~~~-gf~~~deY------Y~~aSs~~~v--------~~I~VP~L~ina~DDPv~p~~~ip~~~~ 346 (409)
T KOG1838|consen 282 ILKSRSVREFDEALTRPMF-GFKSVDEY------YKKASSSNYV--------DKIKVPLLCINAADDPVVPEEAIPIDDI 346 (409)
T ss_pred hhhcCcHHHHHhhhhhhhc-CCCcHHHH------Hhhcchhhhc--------ccccccEEEEecCCCCCCCcccCCHHHH
Confidence 0111122222222222211 11111111 1111122222 34469999999999999998654 3455
Q ss_pred HhCCCceEEEEcCCCccCcccC
Q 016141 356 NSNPPELVFEIKGSDHAPFFSK 377 (394)
Q Consensus 356 ~~~~~~~~~~i~~agH~~~~e~ 377 (394)
+..|++-+++-..+||..++|.
T Consensus 347 ~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 347 KSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred hcCCcEEEEEeCCCceeeeecc
Confidence 6678888888888999999986
No 84
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.56 E-value=3.8e-13 Score=119.89 Aligned_cols=238 Identities=13% Similarity=0.140 Sum_probs=132.9
Q ss_pred CCceEEEEcCCCCchhc-HHHHH-----HHHHhCCcEEEEecCCCCCCCCC--CCC-CccCHHHHHHHHHHHHHHhCCCC
Q 016141 139 ETSHFVLVHGGGFGAWC-WYKTM-----TLLKESGFKVDAVDLTGSGVSSC--DTN-SITSLEQYVKPLIDTFNELGNEE 209 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~-~~~~~-----~~l~~~g~~v~~~d~~G~G~s~~--~~~-~~~~~~~~~~~~~~~l~~l~~~~ 209 (394)
.+|++|-.|-.|.+... |..+. ..+.++ |.|+-+|.||+..-.. +.+ ...++++++++|..++++++++
T Consensus 22 ~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~-f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk- 99 (283)
T PF03096_consen 22 NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQN-FCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLK- 99 (283)
T ss_dssp TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTT-SEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---
T ss_pred CCceEEEeccccccchHHHHHHhcchhHHHHhhc-eEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCcc-
Confidence 58999999999988766 66553 556665 9999999999976433 222 4579999999999999999998
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCc-----hHHHHHHHHHHHhcCCCCCC--C
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGS-----NDLMQQAQIFLYANGKQNPP--T 282 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~ 282 (394)
.++.+|--.|++|...+|..+|++|.++||+++.....+ +.+++...... ..+......++....+.... .
T Consensus 100 ~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g--w~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~ 177 (283)
T PF03096_consen 100 SVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAG--WMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEEN 177 (283)
T ss_dssp -EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHC
T ss_pred EEEEEeeccchhhhhhccccCccceeEEEEEecCCCCcc--HHHHHHHHHhcccccccccccchHHhhhhcccccccccc
Confidence 999999999999999999999999999999999875443 33332222110 00000011111000000000 0
Q ss_pred cchhhHHHHHHHhcccCCchhHHHHHH-hccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--
Q 016141 283 SIDLDRTLLRDLLFNRSAAKDVELALI-SMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP-- 359 (394)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~-- 359 (394)
..+ ....++..+.............. .....++....... .||+|+|.|+..+.+ +.+..+...+.
T Consensus 178 n~D-lv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~--------~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~ 246 (283)
T PF03096_consen 178 NSD-LVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSL--------GCPVLLVVGDNSPHV--DDVVEMNSKLDPT 246 (283)
T ss_dssp T-H-HHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTC--------CS-EEEEEETTSTTH--HHHHHHHHHS-CC
T ss_pred cHH-HHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCC--------CCCeEEEEecCCcch--hhHHHHHhhcCcc
Confidence 001 11222333333223233332222 22333333332222 499999999988754 44556666653
Q ss_pred CceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 360 PELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 360 ~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
+.++..++++|=.+..|+|+.+++.+.-|++-
T Consensus 247 ~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 247 KTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp CEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred cceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 47899999999999999999999999999873
No 85
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.56 E-value=4.6e-14 Score=134.87 Aligned_cols=107 Identities=20% Similarity=0.199 Sum_probs=83.4
Q ss_pred CCCCceEEEEcCCCCch--hcHHH-HHHHHHh--CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----C-
Q 016141 137 SPETSHFVLVHGGGFGA--WCWYK-TMTLLKE--SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----G- 206 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~--~~~~~-~~~~l~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~- 206 (394)
+..+|++|++|||+.+. ..|.. ++..|.. ..|+||++|++|+|.+..+... .....+++++.++++.+ +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~-~~t~~vg~~la~lI~~L~~~~gl 116 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSA-AYTKLVGKDVAKFVNWMQEEFNY 116 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCcccc-ccHHHHHHHHHHHHHHHHHhhCC
Confidence 45679999999998754 45665 5555542 2599999999999988655322 33466667777777765 3
Q ss_pred -CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 207 -NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 207 -~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
++ +++||||||||.+|..++.++|++|.++|+++|+.+
T Consensus 117 ~l~-~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 117 PWD-NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CCC-cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 55 999999999999999999999999999999999754
No 86
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.54 E-value=2.5e-13 Score=121.14 Aligned_cols=221 Identities=14% Similarity=0.166 Sum_probs=134.6
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
++|+++|+.+++...|..+++.|....+.|+.++.+|.+.. .....+++++++...+.|.....+++++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~---~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDD---EPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTT---SHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCC---CCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccH
Confidence 47999999999999999999999874589999999999832 224579999999999888887665699999999999
Q ss_pred HHHHHHHHhC---CcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcc
Q 016141 221 ACISYVMELF---PSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFN 297 (394)
Q Consensus 221 ~~a~~~a~~~---p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (394)
.+|..+|.+. ...|..++++++........ ..... ................ ..........+...+..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~-~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 148 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPPPSIKER-PRSRE--PSDEQFIEELRRIGGT------PDASLEDEELLARLLRA 148 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSSTTCHSC-HHHHH--CHHHHHHHHHHHHCHH------HHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCCCCcccc-hhhhh--hhHHHHHHHHHHhcCC------chhhhcCHHHHHHHHHH
Confidence 9999999763 34599999999765432110 00000 0000011111000000 00000000001111000
Q ss_pred cCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChH---HHHHHHHhCCC-ceEEEEcCCCccC
Q 016141 298 RSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVS---VQEAMINSNPP-ELVFEIKGSDHAP 373 (394)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~---~~~~l~~~~~~-~~~~~i~~agH~~ 373 (394)
.............. . .....+|.++.....|...... ....+.+...+ .+++.++| +|+.
T Consensus 149 ------~~~~~~~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G-~H~~ 212 (229)
T PF00975_consen 149 ------LRDDFQALENYSIR----P-----IDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPG-DHFS 212 (229)
T ss_dssp ------HHHHHHHHHTCS-T----T-----SSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESS-ETTG
T ss_pred ------HHHHHHHHhhccCC----c-----cccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcC-CCcE
Confidence 00000000111000 0 0000367888888888887665 34446666654 67888985 9999
Q ss_pred ccc-ChHHHHHHHHHHH
Q 016141 374 FFS-KPRALHRILVEIS 389 (394)
Q Consensus 374 ~~e-~p~~v~~~i~~fl 389 (394)
++. +..++++.|.++|
T Consensus 213 ~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 213 MLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHSTTHHHHHHHHHHHH
T ss_pred ecchHHHHHHHHHhccC
Confidence 997 7788888888875
No 87
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.50 E-value=3e-13 Score=114.16 Aligned_cols=155 Identities=23% Similarity=0.286 Sum_probs=102.8
Q ss_pred EEEEcCCCCch-hcHHHHHH-HHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 143 FVLVHGGGFGA-WCWYKTMT-LLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 143 vvl~HG~~~~~-~~~~~~~~-~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
|+++||++++. ..|..+.+ .|... ++|-.+|+ ...+.+++.+.+.+.+..+. ++++|||||+|+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~-----------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc 66 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW-----------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGC 66 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-------------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc-----------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHH
Confidence 78999997775 55776654 56665 78888776 12467888888887777653 579999999999
Q ss_pred HHHHHHH-HhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccC
Q 016141 221 ACISYVM-ELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRS 299 (394)
Q Consensus 221 ~~a~~~a-~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (394)
..++.++ .....+|.+++|++|+........ ... +....
T Consensus 67 ~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~~~----------------------------~~~------------~~~f~ 106 (171)
T PF06821_consen 67 LTALRWLAEQSQKKVAGALLVAPFDPDDPEPF----------------------------PPE------------LDGFT 106 (171)
T ss_dssp HHHHHHHHHTCCSSEEEEEEES--SCGCHHCC----------------------------TCG------------GCCCT
T ss_pred HHHHHHHhhcccccccEEEEEcCCCcccccch----------------------------hhh------------ccccc
Confidence 9999999 777889999999999753200000 000 00000
Q ss_pred CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccC
Q 016141 300 AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK 377 (394)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~ 377 (394)
. .-...+ .+|.++|.+++|+++|.+.++.+++.+ +++++.++++||+.-.+.
T Consensus 107 ~-----------------~p~~~l--------~~~~~viaS~nDp~vp~~~a~~~A~~l-~a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 107 P-----------------LPRDPL--------PFPSIVIASDNDPYVPFERAQRLAQRL-GAELIILGGGGHFNAASG 158 (171)
T ss_dssp T-----------------SHCCHH--------HCCEEEEEETTBSSS-HHHHHHHHHHH-T-EEEEETS-TTSSGGGT
T ss_pred c-----------------Cccccc--------CCCeEEEEcCCCCccCHHHHHHHHHHc-CCCeEECCCCCCcccccC
Confidence 0 000011 377899999999999999999999998 899999999999977654
No 88
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.49 E-value=1.5e-12 Score=122.12 Aligned_cols=213 Identities=15% Similarity=0.115 Sum_probs=115.2
Q ss_pred CCceEEEEcCCCCchhcHH-HHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC---CCCcEEEE
Q 016141 139 ETSHFVLVHGGGFGAWCWY-KTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG---NEEKVILV 214 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~~~lv 214 (394)
..|+||++-|+-+-...+. .+.++|..+|+.++++|.||.|.|....-. .+.+.+...|.+++.... . .+|.++
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~p~VD~-~RV~~~ 266 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASRPWVDH-TRVGAW 266 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHSTTEEE-EEEEEE
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcCCccCh-hheEEE
Confidence 3467888878777666654 445679999999999999999998643211 222344455555555543 3 399999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHH
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDL 294 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (394)
|.|+||++|+++|..++++++++|.++++... ++.........+.+. ...+...
T Consensus 267 G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~----~ft~~~~~~~~P~my----------------------~d~LA~r 320 (411)
T PF06500_consen 267 GFSFGGYYAVRLAALEDPRLKAVVALGAPVHH----FFTDPEWQQRVPDMY----------------------LDVLASR 320 (411)
T ss_dssp EETHHHHHHHHHHHHTTTT-SEEEEES---SC----GGH-HHHHTTS-HHH----------------------HHHHHHH
T ss_pred EeccchHHHHHHHHhcccceeeEeeeCchHhh----hhccHHHHhcCCHHH----------------------HHHHHHH
Confidence 99999999999999899999999999997532 111111111111111 1111111
Q ss_pred hcccCCchhHHHHHHhccccCC--cccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCC-c
Q 016141 295 LFNRSAAKDVELALISMRPIPF--APVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD-H 371 (394)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~ag-H 371 (394)
+... ...+.... ..+..+.+ ..++. .....+|+|.+.|++|.++|.+..+-++..-.+.+...++... |
T Consensus 321 lG~~-~~~~~~l~-~el~~~SLk~qGlL~------~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~ 392 (411)
T PF06500_consen 321 LGMA-AVSDESLR-GELNKFSLKTQGLLS------GRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLH 392 (411)
T ss_dssp CT-S-CE-HHHHH-HHGGGGSTTTTTTTT------SS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHH
T ss_pred hCCc-cCCHHHHH-HHHHhcCcchhcccc------CCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCccc
Confidence 1111 11111111 11111111 11220 1222589999999999999999999998888788888888544 3
Q ss_pred cCcccChHHHHHHHHHHHhh
Q 016141 372 APFFSKPRALHRILVEISKI 391 (394)
Q Consensus 372 ~~~~e~p~~v~~~i~~fl~~ 391 (394)
.. -+.-...+.+||+.
T Consensus 393 ~g----y~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 393 MG----YPQALDEIYKWLED 408 (411)
T ss_dssp HH----HHHHHHHHHHHHHH
T ss_pred cc----hHHHHHHHHHHHHH
Confidence 22 23455667777765
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.49 E-value=1.3e-13 Score=126.01 Aligned_cols=107 Identities=15% Similarity=0.225 Sum_probs=80.1
Q ss_pred CCCCceEEEEcCCCCch-hcHHHH-HHHH-HhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh------CC
Q 016141 137 SPETSHFVLVHGGGFGA-WCWYKT-MTLL-KESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL------GN 207 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~-~~~~~~-~~~l-~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l------~~ 207 (394)
+.++|+||++|||+++. ..|... ...+ ...+|+|+++|++|++.+..+ ....++..+++++..+++.+ +.
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~-~a~~~~~~v~~~la~~l~~L~~~~g~~~ 111 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYP-QAVNNTRVVGAELAKFLDFLVDNTGLSL 111 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChH-HHHHhHHHHHHHHHHHHHHHHHhcCCCh
Confidence 45678999999999887 667544 4444 445799999999998433211 12234555556666666654 23
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 208 EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 208 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+ +++||||||||.+|..++.++|++|.++|+++|+.+
T Consensus 112 ~-~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 112 E-NVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred H-HEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 4 899999999999999999999999999999998764
No 90
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.47 E-value=7.5e-12 Score=118.48 Aligned_cols=246 Identities=13% Similarity=0.112 Sum_probs=145.5
Q ss_pred ceEEEEcCCCCchhcH-HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 141 SHFVLVHGGGFGAWCW-YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
|+||++..+.+..... +.+++.|.. |+.|+..|+.--+..... ...++++|+++-+.++++++|. +++++|+|+|
T Consensus 103 ~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~-~~~f~ldDYi~~l~~~i~~~G~--~v~l~GvCqg 178 (406)
T TIGR01849 103 PAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARMVPLS-AGKFDLEDYIDYLIEFIRFLGP--DIHVIAVCQP 178 (406)
T ss_pred CcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchh-cCCCCHHHHHHHHHHHHHHhCC--CCcEEEEchh
Confidence 7899999887655544 678888888 999999999876644322 2558999999999999999974 4999999999
Q ss_pred HHHHHHHHHhC-----CcccceEEEeecccCCCCc-chHHHHHhhcCchHHHHH----------------------HHHH
Q 016141 220 GACISYVMELF-----PSKVAKAVFIAATMLTSGQ-SALDTISQQMGSNDLMQQ----------------------AQIF 271 (394)
Q Consensus 220 g~~a~~~a~~~-----p~~v~~lVli~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------------------~~~~ 271 (394)
|..++.+++.+ |.+++.+++++++...... .....+........+.+. ...|
T Consensus 179 G~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F 258 (406)
T TIGR01849 179 AVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGF 258 (406)
T ss_pred hHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHH
Confidence 99977666554 6679999999998876432 222222211110000000 0000
Q ss_pred HHhc--------------CCCCCCCcchhhHHHHHHHhcccCCchhHHHHHH--hccccCCcccccccc----cCCCCCC
Q 016141 272 LYAN--------------GKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALI--SMRPIPFAPVLEKLS----VSDDNYG 331 (394)
Q Consensus 272 ~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~----~~~~~~~ 331 (394)
...+ ..............++..+.....-......... .+....+.. ..+. .-++..+
T Consensus 259 ~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~--G~l~v~G~~Vdl~~I 336 (406)
T TIGR01849 259 ISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQ--GKFIVEGKRVDPGAI 336 (406)
T ss_pred HHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccC--CcEEECCEEecHHHC
Confidence 0000 0000000000000111111111111111111111 000100000 1111 1124456
Q ss_pred C-cCEEEEecCCCCCCChHHHHHHHHhC---C--CceEEEEcCCCccCcccC---hHHHHHHHHHHHhhh
Q 016141 332 S-VPRFYIKTLQDCAIPVSVQEAMINSN---P--PELVFEIKGSDHAPFFSK---PRALHRILVEISKIT 392 (394)
Q Consensus 332 ~-~PvLii~G~~D~~vp~~~~~~l~~~~---~--~~~~~~i~~agH~~~~e~---p~~v~~~i~~fl~~~ 392 (394)
+ +|+|.|.|++|.++|++..+.+.+.+ + ..+..+.+++||+..+.- .+++...|.+||.++
T Consensus 337 ~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 337 TRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred cccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 7 99999999999999999988888874 4 245677778999987763 578899999999864
No 91
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.45 E-value=5e-12 Score=114.89 Aligned_cols=108 Identities=22% Similarity=0.317 Sum_probs=92.6
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhC---CcEEEEecCCCCCCCCCC-----CCCccCHHHHHHHHHHHHHHhC-----
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKES---GFKVDAVDLTGSGVSSCD-----TNSITSLEQYVKPLIDTFNELG----- 206 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~---g~~v~~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~~l~~l~----- 206 (394)
+..||+++|.++-...|..++..|.+. .|.|+++.+.||-.++.. ....++++++++...++++++-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999999988754 699999999999877654 3467999999998888887753
Q ss_pred CCCcEEEEEeChHHHHHHHHHHhCC---cccceEEEeecccCCC
Q 016141 207 NEEKVILVGHDFGGACISYVMELFP---SKVAKAVFIAATMLTS 247 (394)
Q Consensus 207 ~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lVli~~~~~~~ 247 (394)
.+.+++|+|||.|++++++++.+.+ .+|.+++++-|.....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccc
Confidence 3358999999999999999999999 7899999999986543
No 92
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.45 E-value=2.3e-11 Score=118.55 Aligned_cols=104 Identities=13% Similarity=0.176 Sum_probs=86.1
Q ss_pred CCceEEEEcCCCCchhcH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----CCCC
Q 016141 139 ETSHFVLVHGGGFGAWCW-----YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----GNEE 209 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~~~~ 209 (394)
.+.+||+++.+-.....| ..++++|.++||.|+++|+++-+... ...+++++++.+.+.++.+ |.+
T Consensus 214 ~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~----r~~~ldDYv~~i~~Ald~V~~~tG~~- 288 (560)
T TIGR01839 214 HARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAH----REWGLSTYVDALKEAVDAVRAITGSR- 288 (560)
T ss_pred CCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhh----cCCCHHHHHHHHHHHHHHHHHhcCCC-
Confidence 457999999998776767 57999999999999999999876553 3468899988777777765 455
Q ss_pred cEEEEEeChHHHHHHH----HHHhCCc-ccceEEEeecccCCC
Q 016141 210 KVILVGHDFGGACISY----VMELFPS-KVAKAVFIAATMLTS 247 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~lVli~~~~~~~ 247 (394)
++.++|||+||.+++. +++++++ +|++++++.++....
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccC
Confidence 9999999999999886 7788886 799999999987654
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=99.43 E-value=3.5e-12 Score=110.26 Aligned_cols=169 Identities=15% Similarity=0.129 Sum_probs=112.9
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCC--CCCC---CCCCCCccCHHHH-------HHHHHHHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTG--SGVS---SCDTNSITSLEQY-------VKPLIDTFNE 204 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G--~G~s---~~~~~~~~~~~~~-------~~~~~~~l~~ 204 (394)
.+..|+||++||+|++...+-++...+..+ +.++.+.-+- .|.- .......++.+++ ++-+..+.+.
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 355678999999999999988866666654 6666553210 0100 0001122333333 3344444455
Q ss_pred hCCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCc
Q 016141 205 LGNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTS 283 (394)
Q Consensus 205 l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (394)
.+++ ++++++|+|.|+.+++.+..++|+.++++|++++........
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------------------- 140 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------------------- 140 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------------------
Confidence 5652 499999999999999999999999999999999876532110
Q ss_pred chhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----C
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN----P 359 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~----~ 359 (394)
.......|+++++|+.|+++|.....++.+.+ .
T Consensus 141 -------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~ 177 (207)
T COG0400 141 -------------------------------------------LPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGA 177 (207)
T ss_pred -------------------------------------------ccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCC
Confidence 00001489999999999999988877666554 4
Q ss_pred CceEEEEcCCCccCcccChHHHHH
Q 016141 360 PELVFEIKGSDHAPFFSKPRALHR 383 (394)
Q Consensus 360 ~~~~~~i~~agH~~~~e~p~~v~~ 383 (394)
++++..++ .||.+..+.-+.+.+
T Consensus 178 ~v~~~~~~-~GH~i~~e~~~~~~~ 200 (207)
T COG0400 178 DVEVRWHE-GGHEIPPEELEAARS 200 (207)
T ss_pred CEEEEEec-CCCcCCHHHHHHHHH
Confidence 57888888 799877655444444
No 94
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.43 E-value=1.2e-11 Score=114.86 Aligned_cols=213 Identities=16% Similarity=0.132 Sum_probs=116.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC-------------------CCccCHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT-------------------NSITSLEQYVKPL 198 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------------------~~~~~~~~~~~~~ 198 (394)
+.-|.||.+||.++....|...+. ++..||.|+.+|.||+|....+. ...+-+..+..|.
T Consensus 81 ~~~Pavv~~hGyg~~~~~~~~~~~-~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~ 159 (320)
T PF05448_consen 81 GKLPAVVQFHGYGGRSGDPFDLLP-WAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDA 159 (320)
T ss_dssp SSEEEEEEE--TT--GGGHHHHHH-HHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHH
T ss_pred CCcCEEEEecCCCCCCCCcccccc-cccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHH
Confidence 445799999999999888866554 66779999999999999322100 0111133344566
Q ss_pred HHHHHHhC----C-CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHH
Q 016141 199 IDTFNELG----N-EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLY 273 (394)
Q Consensus 199 ~~~l~~l~----~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (394)
...++.+. + .+++.+.|.|+||.+++.+|+..+ +|++++...|..... ...+......... ..
T Consensus 160 ~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~----~~~~~~~~~~~~y-~~------ 227 (320)
T PF05448_consen 160 VRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDF----RRALELRADEGPY-PE------ 227 (320)
T ss_dssp HHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSH----HHHHHHT--STTT-HH------
T ss_pred HHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccch----hhhhhcCCccccH-HH------
Confidence 55555541 1 148999999999999999999775 699999888865321 1111100000000 00
Q ss_pred hcCCCCCCCcchhhHHHHHHHhc-ccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHH
Q 016141 274 ANGKQNPPTSIDLDRTLLRDLLF-NRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQE 352 (394)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~ 352 (394)
+..++. ..............+...+...+...+ ++|+++-.|-.|.++|+..+-
T Consensus 228 -----------------~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri--------~~pvl~~~gl~D~~cPP~t~f 282 (320)
T PF05448_consen 228 -----------------IRRYFRWRDPHHEREPEVFETLSYFDAVNFARRI--------KCPVLFSVGLQDPVCPPSTQF 282 (320)
T ss_dssp -----------------HHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG----------SEEEEEEETT-SSS-HHHHH
T ss_pred -----------------HHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHc--------CCCEEEEEecCCCCCCchhHH
Confidence 011110 000000111111112222333344444 599999999999999999999
Q ss_pred HHHHhCC-CceEEEEcCCCccCcccChHHH-HHHHHHHHhhh
Q 016141 353 AMINSNP-PELVFEIKGSDHAPFFSKPRAL-HRILVEISKIT 392 (394)
Q Consensus 353 ~l~~~~~-~~~~~~i~~agH~~~~e~p~~v-~~~i~~fl~~~ 392 (394)
...+.++ ..++.+++..||... .++ .+...+||.+|
T Consensus 283 A~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 283 AAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 9998887 479999999999543 344 67778888765
No 95
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.42 E-value=3.4e-11 Score=102.77 Aligned_cols=182 Identities=16% Similarity=0.223 Sum_probs=111.9
Q ss_pred EEEEcCCCCchhcHHH--HHHHHHhCC--cEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 143 FVLVHGGGFGAWCWYK--TMTLLKESG--FKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~--~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
||++||+.++...... +.+.+.+.+ ..++++|++ ...++..+.+.++++....+ .+.|||.||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~------------~~p~~a~~~l~~~i~~~~~~-~~~liGSSl 68 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP------------PFPEEAIAQLEQLIEELKPE-NVVLIGSSL 68 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC------------cCHHHHHHHHHHHHHhCCCC-CeEEEEECh
Confidence 7999999999888653 456677654 456666654 45677778888999988776 699999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhccc
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNR 298 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
||+.|..+|.+++ +.+ |+++|+..+. ..+..... ............+....+.
T Consensus 69 GG~~A~~La~~~~--~~a-vLiNPav~p~-----~~l~~~iG-------------~~~~~~~~e~~~~~~~~~~------ 121 (187)
T PF05728_consen 69 GGFYATYLAERYG--LPA-VLINPAVRPY-----ELLQDYIG-------------EQTNPYTGESYELTEEHIE------ 121 (187)
T ss_pred HHHHHHHHHHHhC--CCE-EEEcCCCCHH-----HHHHHhhC-------------ccccCCCCccceechHhhh------
Confidence 9999999999885 444 9999986431 11111100 0000000000000000000
Q ss_pred CCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccCh
Q 016141 299 SAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKP 378 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p 378 (394)
.+..+.... .....+++++.++.|.+++...+ .+...++..++.+|++|-+ ++-
T Consensus 122 --------------------~l~~l~~~~-~~~~~~~lvll~~~DEvLd~~~a---~~~~~~~~~~i~~ggdH~f--~~f 175 (187)
T PF05728_consen 122 --------------------ELKALEVPY-PTNPERYLVLLQTGDEVLDYREA---VAKYRGCAQIIEEGGDHSF--QDF 175 (187)
T ss_pred --------------------hcceEeccc-cCCCccEEEEEecCCcccCHHHH---HHHhcCceEEEEeCCCCCC--ccH
Confidence 000000000 11137899999999999988543 3344555666778889975 356
Q ss_pred HHHHHHHHHHHh
Q 016141 379 RALHRILVEISK 390 (394)
Q Consensus 379 ~~v~~~i~~fl~ 390 (394)
++....|.+|+.
T Consensus 176 ~~~l~~i~~f~~ 187 (187)
T PF05728_consen 176 EEYLPQIIAFLQ 187 (187)
T ss_pred HHHHHHHHHhhC
Confidence 677778888863
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.41 E-value=4.1e-11 Score=106.82 Aligned_cols=175 Identities=16% Similarity=0.117 Sum_probs=128.4
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC-CCCCCCCC------C----ccCHHHHHHHHHHHHHHhC---
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS-GVSSCDTN------S----ITSLEQYVKPLIDTFNELG--- 206 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~------~----~~~~~~~~~~~~~~l~~l~--- 206 (394)
|.||++|++.+-......+++.|++.||.|+++|+-+. |.+..... . ..+..+...|+.+.++.|.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~ 107 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQP 107 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCC
Confidence 89999999999888999999999999999999998764 33221110 0 1233667778888887773
Q ss_pred --CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcc
Q 016141 207 --NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSI 284 (394)
Q Consensus 207 --~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (394)
..++|.++|+||||.+++.++.+.| .|++.|..-+........
T Consensus 108 ~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~~---------------------------------- 152 (236)
T COG0412 108 QVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDTA---------------------------------- 152 (236)
T ss_pred CCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCccc----------------------------------
Confidence 1248999999999999999999877 688888766654311000
Q ss_pred hhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC----C
Q 016141 285 DLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP----P 360 (394)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~----~ 360 (394)
....+++|+|+++|+.|..+|.+..+.+.+.+. .
T Consensus 153 ------------------------------------------~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~ 190 (236)
T COG0412 153 ------------------------------------------DAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVK 190 (236)
T ss_pred ------------------------------------------ccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCC
Confidence 011226999999999999999887766665542 5
Q ss_pred ceEEEEcCCCccCcccC-----------hHHHHHHHHHHHhhh
Q 016141 361 ELVFEIKGSDHAPFFSK-----------PRALHRILVEISKIT 392 (394)
Q Consensus 361 ~~~~~i~~agH~~~~e~-----------p~~v~~~i~~fl~~~ 392 (394)
.++.+++++.|.++.+. .+.-.+.+.+|+++.
T Consensus 191 ~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 191 VDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred eeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 78899999999888542 244557777787764
No 97
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.40 E-value=1.6e-11 Score=123.47 Aligned_cols=105 Identities=12% Similarity=0.054 Sum_probs=82.4
Q ss_pred CCCceEEEEcCCCCchh---cH-HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCC----CC
Q 016141 138 PETSHFVLVHGGGFGAW---CW-YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN----EE 209 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~---~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~----~~ 209 (394)
+..|+||++||++.+.. .+ ......|+++||.|+++|+||+|.|.+.... .+ ...++|+.++++.+.. +.
T Consensus 20 ~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~-~~-~~~~~D~~~~i~~l~~q~~~~~ 97 (550)
T TIGR00976 20 GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDL-LG-SDEAADGYDLVDWIAKQPWCDG 97 (550)
T ss_pred CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEe-cC-cccchHHHHHHHHHHhCCCCCC
Confidence 35689999999987653 22 2345678889999999999999999865422 22 4566777777776621 24
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
+|+++|||+||.+++.+|..+|+.++++|..++..
T Consensus 98 ~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 98 NVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred cEEEEEeChHHHHHHHHhccCCCceeEEeecCccc
Confidence 89999999999999999999999999999988764
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.39 E-value=6.1e-12 Score=113.35 Aligned_cols=238 Identities=17% Similarity=0.163 Sum_probs=87.7
Q ss_pred CCceEEEEcCCCCchh---cHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC-------CC
Q 016141 139 ETSHFVLVHGGGFGAW---CWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG-------NE 208 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~-------~~ 208 (394)
....||||.|++.+.. +...+++.|.+.||.|+-+.+.... .--+..+++..++||.++++++. -.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy----~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~ 107 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSY----SGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGR 107 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGB----TTS-S--HHHHHHHHHHHHHHHHHHS------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCcc----CCcCcchhhhHHHHHHHHHHHHHHhhccccCC
Confidence 4558999999977654 3677888998789999999876211 11133578888888888887651 12
Q ss_pred CcEEEEEeChHHHHHHHHHHhCC-----cccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCC--CC
Q 016141 209 EKVILVGHDFGGACISYVMELFP-----SKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQN--PP 281 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 281 (394)
++|+|+|||.|+.-+++++.... ..|+++||-+|............ ......+........+....... +.
T Consensus 108 ~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~--~~~~~~~~v~~A~~~i~~g~~~~~lp~ 185 (303)
T PF08538_consen 108 EKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLG--EREAYEELVALAKELIAEGKGDEILPR 185 (303)
T ss_dssp S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHH--H---HHHHHHHHHHHHHCT-TT-GG--
T ss_pred ccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhccc--chHHHHHHHHHHHHHHHcCCCCceeec
Confidence 49999999999999999988643 56999999999875543222111 01112223333333322111110 00
Q ss_pred Ccch--h-hHHHHHHHhcccC-CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHH-----HH
Q 016141 282 TSID--L-DRTLLRDLLFNRS-AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSV-----QE 352 (394)
Q Consensus 282 ~~~~--~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~-----~~ 352 (394)
.... . ....-...+.... ...+-......+....+...+..+ ++|+|++.+++|..+|... .+
T Consensus 186 ~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v--------~~plLvl~Sg~DEyvP~~vdk~~Ll~ 257 (303)
T PF08538_consen 186 EFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKV--------SKPLLVLYSGKDEYVPPWVDKEALLE 257 (303)
T ss_dssp --GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG----------S-EEEEEE--TT-------------
T ss_pred cccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccC--------CCceEEEecCCCceeccccccccccc
Confidence 0000 0 0000011111100 011111111111222222333333 4799999999999998754 22
Q ss_pred HHHHhCCC----ceEEEEcCCCccCcccCh----HHHHHHHHHHHh
Q 016141 353 AMINSNPP----ELVFEIKGSDHAPFFSKP----RALHRILVEISK 390 (394)
Q Consensus 353 ~l~~~~~~----~~~~~i~~agH~~~~e~p----~~v~~~i~~fl~ 390 (394)
++.+..+. ..--++|||+|.+--+.. +.+.+.|..||+
T Consensus 258 rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 258 RWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp ----------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 23322221 234589999999875543 357788888874
No 99
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.39 E-value=1.3e-12 Score=95.12 Aligned_cols=72 Identities=31% Similarity=0.376 Sum_probs=62.9
Q ss_pred CCccCCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHH
Q 016141 132 EPKIESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN 203 (394)
Q Consensus 132 ~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~ 203 (394)
.+......+.+|+++||++.+...|..+++.|+++||.|+++|+||||.|.+......+++++++|+..+++
T Consensus 8 ~w~p~~~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 8 RWKPENPPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred EecCCCCCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 333434457799999999999999999999999999999999999999999776677899999999998874
No 100
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.38 E-value=9.6e-12 Score=112.44 Aligned_cols=103 Identities=23% Similarity=0.317 Sum_probs=92.8
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhC---------CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKES---------GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~---------g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
-+++++|||+++-+.|..+++.|.+. -|.||+|.+||+|.|+.+....+...+.|.-+..++=.+|.+ ++
T Consensus 153 ~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~n-kf 231 (469)
T KOG2565|consen 153 KPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYN-KF 231 (469)
T ss_pred cceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcc-ee
Confidence 38999999999999999999999764 278999999999999998888889999999999999999998 99
Q ss_pred EEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 212 ILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
.|-|-.||+.|+..+|..+|+.|.|+-+-.+..
T Consensus 232 fiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 232 FIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred EeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 999999999999999999999999886654443
No 101
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.35 E-value=2.1e-11 Score=103.65 Aligned_cols=228 Identities=18% Similarity=0.222 Sum_probs=128.5
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC--CccCHHHHHH-HHHHHHHHhCC---CCcEEEE
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN--SITSLEQYVK-PLIDTFNELGN---EEKVILV 214 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~-~~~~~l~~l~~---~~~~~lv 214 (394)
..|++-.+.+.....|+.++..+++.||.|+.+|+||.|.|..... ..+.+.|++. |+.+.++.++. ..+.+.|
T Consensus 31 g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~v 110 (281)
T COG4757 31 GRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFV 110 (281)
T ss_pred CcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEe
Confidence 3566666667777888999999999999999999999999975432 3466777765 66666665532 3489999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCc-chHHHHHhhcCch---H----HHHHHHHHHHhcCCCCCCCcchh
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQ-SALDTISQQMGSN---D----LMQQAQIFLYANGKQNPPTSIDL 286 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~-~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~ 286 (394)
|||+||.+.-.+.+ ++ ++.+....+......+. .....+....... . +.......+...+.+.+...
T Consensus 111 gHS~GGqa~gL~~~-~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v--- 185 (281)
T COG4757 111 GHSFGGQALGLLGQ-HP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTV--- 185 (281)
T ss_pred eccccceeeccccc-Cc-ccceeeEeccccccccchhhhhcccceeeccccccchhhccccCcHhhcCCCccCcchH---
Confidence 99999997665554 55 45444444433221111 0001000000000 0 00000000111111111110
Q ss_pred hHHHHHHHhccc-CCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEE-
Q 016141 287 DRTLLRDLLFNR-SAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVF- 364 (394)
Q Consensus 287 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~- 364 (394)
.+++ +.+.... ....+-. ...+.+..+.+ ++|++++...+|..+|+...+.+....+|+.+.
T Consensus 186 ~RdW-~RwcR~p~y~fddp~-------~~~~~q~yaaV--------rtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~ 249 (281)
T COG4757 186 MRDW-ARWCRHPRYYFDDPA-------MRNYRQVYAAV--------RTPITFSRALDDPWAPPASRDAFASFYRNAPLEM 249 (281)
T ss_pred HHHH-HHHhcCccccccChh-------HhHHHHHHHHh--------cCceeeeccCCCCcCCHHHHHHHHHhhhcCcccc
Confidence 0000 0000000 0000000 00011222333 599999999999999999999999988876544
Q ss_pred -EEcC----CCccCcccCh-HHHHHHHHHHH
Q 016141 365 -EIKG----SDHAPFFSKP-RALHRILVEIS 389 (394)
Q Consensus 365 -~i~~----agH~~~~e~p-~~v~~~i~~fl 389 (394)
.++. -||+-.+-++ |.+.+.+.+|+
T Consensus 250 ~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 250 RDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred eecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 3433 4999999887 88888887775
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.31 E-value=1.7e-11 Score=124.24 Aligned_cols=90 Identities=21% Similarity=0.173 Sum_probs=76.3
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCC---------CCC-------------ccCHHHHHHH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCD---------TNS-------------ITSLEQYVKP 197 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~---------~~~-------------~~~~~~~~~~ 197 (394)
.|+|||+||++++...|..++..|.++||+|+++|+||||.|... ... ...+.+.+.|
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~D 528 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILD 528 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHH
Confidence 469999999999999999999999999999999999999999443 111 1378999999
Q ss_pred HHHHHHHhC--------------C-CCcEEEEEeChHHHHHHHHHHh
Q 016141 198 LIDTFNELG--------------N-EEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 198 ~~~~l~~l~--------------~-~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+..+...++ . ..+++++||||||.++..++..
T Consensus 529 ll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 529 LLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 998888776 1 1389999999999999999974
No 103
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.29 E-value=2.1e-10 Score=105.01 Aligned_cols=241 Identities=13% Similarity=0.157 Sum_probs=135.9
Q ss_pred CCCCceEEEEcCCCCchhcHH-HH-HHHHHhCCcEEEEecCCCCCCCCCCCC---CccCHHHHH----------HHHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCWY-KT-MTLLKESGFKVDAVDLTGSGVSSCDTN---SITSLEQYV----------KPLIDT 201 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~-~~-~~~l~~~g~~v~~~d~~G~G~s~~~~~---~~~~~~~~~----------~~~~~~ 201 (394)
...+|.+|.++|.|.+....+ .+ +..|.+.|+..+.+..|-||....... ...++.|+. ..+..+
T Consensus 89 ~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 89 SPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred cCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 345889999999877443332 23 677777899999999999997653321 112222221 234445
Q ss_pred HHHhCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCC
Q 016141 202 FNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPP 281 (394)
Q Consensus 202 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (394)
++..|.. ++.+.|.||||.+|...|..+|..|..+-.+++..... ......+.....+..+........+........
T Consensus 169 l~~~G~~-~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~-vFt~Gvls~~i~W~~L~~q~~~~~~~~~~~~~~ 246 (348)
T PF09752_consen 169 LEREGYG-PLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASV-VFTEGVLSNSINWDALEKQFEDTVYEEEISDIP 246 (348)
T ss_pred HHhcCCC-ceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCc-chhhhhhhcCCCHHHHHHHhcccchhhhhcccc
Confidence 5555777 99999999999999999999999887776666543211 111112222233333322211111111100000
Q ss_pred CcchhhHHHHHHHhcccCCchhH-HHHHHhc-cccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC
Q 016141 282 TSIDLDRTLLRDLLFNRSAAKDV-ELALISM-RPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP 359 (394)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~ 359 (394)
.... ... .. .........+. ......+ ...+...+.... ..--+++|.+++|..+|......+.+..|
T Consensus 247 ~~~~-~~~-~~-~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~-------dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP 316 (348)
T PF09752_consen 247 AQNK-SLP-LD-SMEERRRDREALRFMRGVMDSFTHLTNFPVPV-------DPSAIIFVAAKNDAYVPRHGVLSLQEIWP 316 (348)
T ss_pred cCcc-ccc-ch-hhccccchHHHHHHHHHHHHhhccccccCCCC-------CCCcEEEEEecCceEechhhcchHHHhCC
Confidence 0000 000 00 00000000111 0000000 111111111111 12457899999999999999899999999
Q ss_pred CceEEEEcCCCcc-CcccChHHHHHHHHHHHh
Q 016141 360 PELVFEIKGSDHA-PFFSKPRALHRILVEISK 390 (394)
Q Consensus 360 ~~~~~~i~~agH~-~~~e~p~~v~~~i~~fl~ 390 (394)
++++..++| ||. .++-+.+.|.+.|.+-++
T Consensus 317 GsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 317 GSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CCeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 999999996 996 456677889999988765
No 104
>PRK10115 protease 2; Provisional
Probab=99.26 E-value=3.2e-10 Score=116.29 Aligned_cols=107 Identities=13% Similarity=0.110 Sum_probs=81.9
Q ss_pred CCCceEEEEcCCCCchh--cHHHHHHHHHhCCcEEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHHhCC-
Q 016141 138 PETSHFVLVHGGGFGAW--CWYKTMTLLKESGFKVDAVDLTGSGVSSCD-------TNSITSLEQYVKPLIDTFNELGN- 207 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~l~~l~~- 207 (394)
+..|.||++||..+... .|......|.++||.|+.++.||.|.-... .....+++|+++-+..+++. +.
T Consensus 443 ~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~ 521 (686)
T PRK10115 443 GHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYG 521 (686)
T ss_pred CCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCC
Confidence 45699999999876664 366667788899999999999987654321 11335677777666655544 32
Q ss_pred -CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 208 -EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 208 -~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
.+++.++|.|.||+++..++.++|++++++|...|...
T Consensus 522 d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 522 SPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred ChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 24999999999999999999999999999999888653
No 105
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.26 E-value=3.6e-10 Score=106.90 Aligned_cols=267 Identities=16% Similarity=0.121 Sum_probs=154.2
Q ss_pred CCceeecCCCccCCCCCceEEEEcCCCCchhcHH------HHHHHHHhCCcEEEEecCCCCCCCCCC-----C----CCc
Q 016141 124 RPHQLVNQEPKIESPETSHFVLVHGGGFGAWCWY------KTMTLLKESGFKVDAVDLTGSGVSSCD-----T----NSI 188 (394)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~------~~~~~l~~~g~~v~~~d~~G~G~s~~~-----~----~~~ 188 (394)
++..+..+.+....+.+|+|+|.||+..++..|- .++-.|+++||.|..-+.||.-.|... . -..
T Consensus 57 DgYiL~lhRIp~~~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~ 136 (403)
T KOG2624|consen 57 DGYILTLHRIPRGKKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWD 136 (403)
T ss_pred CCeEEEEeeecCCCCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceee
Confidence 5555555666555578899999999999999994 355678899999999999997766421 1 134
Q ss_pred cCHHHHHH-HHHHHHHHh----CCCCcEEEEEeChHHHHHHHHHHhCCc---ccceEEEeecccCCCC-cchHHHHHh--
Q 016141 189 TSLEQYVK-PLIDTFNEL----GNEEKVILVGHDFGGACISYVMELFPS---KVAKAVFIAATMLTSG-QSALDTISQ-- 257 (394)
Q Consensus 189 ~~~~~~~~-~~~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lVli~~~~~~~~-~~~~~~~~~-- 257 (394)
+++++++. ||-+.|++. +.+ +++.||||.|+.+....+...|+ +|+.+++++|+..... ......+..
T Consensus 137 FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~k~~~~~~~~~~~~~ 215 (403)
T KOG2624|consen 137 FSWHEMGTYDLPAMIDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFPKHIKSLLNKFLDPF 215 (403)
T ss_pred cchhhhhhcCHHHHHHHHHHhcccc-ceEEEEEEccchhheehhcccchhhhhhheeeeecchhhhcccccHHHHhhhhh
Confidence 67777665 666655554 555 99999999999999988887765 7999999999874431 111111111
Q ss_pred ---------hcCchHHHHHH---HHHHHhcCCCC---------------CCCcchhhHHH---HHHHhcccCCchhHHHH
Q 016141 258 ---------QMGSNDLMQQA---QIFLYANGKQN---------------PPTSIDLDRTL---LRDLLFNRSAAKDVELA 307 (394)
Q Consensus 258 ---------~~~~~~~~~~~---~~~~~~~~~~~---------------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 307 (394)
.....+++... ..+........ ......+.... +........+.......
T Consensus 216 ~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~~~~~h~pagtSvk~~~H~ 295 (403)
T KOG2624|consen 216 LGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLPVYLAHLPAGTSVKNIVHW 295 (403)
T ss_pred hhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccchhhccCCCCccHHHHHHH
Confidence 00100000000 00000000000 00000000000 00000111111222222
Q ss_pred HHh-----ccccCCccccccc-------ccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEE---EcCCCcc
Q 016141 308 LIS-----MRPIPFAPVLEKL-------SVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFE---IKGSDHA 372 (394)
Q Consensus 308 ~~~-----~~~~~~~~~~~~i-------~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~---i~~agH~ 372 (394)
... +...++....... .......+++|+.+.+|+.|.++.++..+.+....+++.... +++-.|+
T Consensus 296 ~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHl 375 (403)
T KOG2624|consen 296 AQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHL 375 (403)
T ss_pred HHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccce
Confidence 221 1222222211100 011234558999999999999999999998887777654433 7888887
Q ss_pred Cc---ccChHHHHHHHHHHHhh
Q 016141 373 PF---FSKPRALHRILVEISKI 391 (394)
Q Consensus 373 ~~---~e~p~~v~~~i~~fl~~ 391 (394)
-+ .+.++++.+.|.+.++.
T Consensus 376 DFi~g~da~~~vy~~vi~~~~~ 397 (403)
T KOG2624|consen 376 DFIWGLDAKEEVYDPVIERLRL 397 (403)
T ss_pred eeeeccCcHHHHHHHHHHHHHh
Confidence 44 34589999999988874
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.25 E-value=1.1e-10 Score=129.47 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=88.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+++++++++||++++...|..++..|... +.|+++|.+|+|... ...++++++++++.+.++.+....+++++|||
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~~-~~v~~~~~~g~~~~~---~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S 1141 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDPQ-WSIYGIQSPRPDGPM---QTATSLDEVCEAHLATLLEQQPHGPYHLLGYS 1141 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCCC-CcEEEEECCCCCCCC---CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 34578999999999999999999999774 999999999998653 24579999999999999887655589999999
Q ss_pred hHHHHHHHHHHh---CCcccceEEEeeccc
Q 016141 218 FGGACISYVMEL---FPSKVAKAVFIAATM 244 (394)
Q Consensus 218 ~Gg~~a~~~a~~---~p~~v~~lVli~~~~ 244 (394)
|||.+|..+|.+ .++++..++++++..
T Consensus 1142 ~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1142 LGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred hhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999999985 578899999998753
No 107
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.23 E-value=6.3e-10 Score=89.19 Aligned_cols=177 Identities=15% Similarity=0.148 Sum_probs=120.7
Q ss_pred eEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCC-----CCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 142 HFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSG-----VSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 142 ~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G-----~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
+||+.||.|.+.+. ...++..|+..|+.|..|+++..- ....++....-..++...+.++...+.-. +.++-
T Consensus 16 tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~g-pLi~G 94 (213)
T COG3571 16 TILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEG-PLIIG 94 (213)
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCC-ceeec
Confidence 78999999887654 678889999999999999987543 22223323334456666777777777655 89999
Q ss_pred EeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHH
Q 016141 215 GHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDL 294 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (394)
|+||||-++...+...-..|+++++++-+..+++..-.
T Consensus 95 GkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKPe~------------------------------------------ 132 (213)
T COG3571 95 GKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKPEQ------------------------------------------ 132 (213)
T ss_pred cccccchHHHHHHHhhcCCcceEEEecCccCCCCCccc------------------------------------------
Confidence 99999999998887655569999998865443321100
Q ss_pred hcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCc
Q 016141 295 LFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPF 374 (394)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~ 374 (394)
+....+.-+++|+||.+|+.|.+-..+.... +...+..+++.++++.|..-
T Consensus 133 ----------------------------~Rt~HL~gl~tPtli~qGtrD~fGtr~~Va~-y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 133 ----------------------------LRTEHLTGLKTPTLITQGTRDEFGTRDEVAG-YALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred ----------------------------chhhhccCCCCCeEEeecccccccCHHHHHh-hhcCCceEEEEeccCccccc
Confidence 0000111125999999999999887665522 23345689999999999743
Q ss_pred cc----------ChHHHHHHHHHHHh
Q 016141 375 FS----------KPRALHRILVEISK 390 (394)
Q Consensus 375 ~e----------~p~~v~~~i~~fl~ 390 (394)
-. +-...++.|..|+.
T Consensus 184 p~k~vsgls~~~hL~~~A~~va~~~~ 209 (213)
T COG3571 184 PRKLVSGLSTADHLKTLAEQVAGWAR 209 (213)
T ss_pred cccccccccHHHHHHHHHHHHHHHHh
Confidence 22 23445666666654
No 108
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.19 E-value=1.1e-09 Score=97.72 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=89.2
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
|+|+++|+.++...+|..++..|... ..|+.++.+|+|.-.. ...+++++++...+.|.......+++|+|||+||
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~---~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG 76 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQ---PFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGG 76 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccc---ccCCHHHHHHHHHHHHHHhCCCCCEEEEeecccc
Confidence 58999999999999999999999998 9999999999986322 4478999999999999988877799999999999
Q ss_pred HHHHHHHHh---CCcccceEEEeecccC
Q 016141 221 ACISYVMEL---FPSKVAKAVFIAATML 245 (394)
Q Consensus 221 ~~a~~~a~~---~p~~v~~lVli~~~~~ 245 (394)
.+|...|.+ ..+.|..++++++...
T Consensus 77 ~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 77 AVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999976 3456999999999876
No 109
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.17 E-value=3.2e-09 Score=87.06 Aligned_cols=173 Identities=19% Similarity=0.228 Sum_probs=115.1
Q ss_pred CceEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 140 TSHFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 140 ~~~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
.+.||++||+.++. ..|....+.-. -.+-.+++. .......+++++.+.+.+... +++++||+||+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we~~l---~~a~rveq~--------~w~~P~~~dWi~~l~~~v~a~--~~~~vlVAHSL 68 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWESAL---PNARRVEQD--------DWEAPVLDDWIARLEKEVNAA--EGPVVLVAHSL 68 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHHhhC---ccchhcccC--------CCCCCCHHHHHHHHHHHHhcc--CCCeEEEEecc
Confidence 35799999996665 45765543211 112222221 224468899999998888887 33799999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhccc
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNR 298 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (394)
|+.+++.++.+....|+|++|++|+-........ .....
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~----------------------------------------~~~~t- 107 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP----------------------------------------KHLMT- 107 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccch----------------------------------------hhccc-
Confidence 9999999999877799999999997543210000 00000
Q ss_pred CCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCccc--
Q 016141 299 SAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFS-- 376 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e-- 376 (394)
+... . ..++ --|.+++...+|++++.+.++.+++.+ ++.++.+..+||+--.+
T Consensus 108 ------------f~~~---p-~~~l--------pfps~vvaSrnDp~~~~~~a~~~a~~w-gs~lv~~g~~GHiN~~sG~ 162 (181)
T COG3545 108 ------------FDPI---P-REPL--------PFPSVVVASRNDPYVSYEHAEDLANAW-GSALVDVGEGGHINAESGF 162 (181)
T ss_pred ------------cCCC---c-cccC--------CCceeEEEecCCCCCCHHHHHHHHHhc-cHhheecccccccchhhcC
Confidence 0000 0 0111 268999999999999999999999998 56777788889985433
Q ss_pred -ChHHHHHHHHHHHhh
Q 016141 377 -KPRALHRILVEISKI 391 (394)
Q Consensus 377 -~p~~v~~~i~~fl~~ 391 (394)
.=.+....+.+|+.+
T Consensus 163 g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 163 GPWPEGYALLAQLLSR 178 (181)
T ss_pred CCcHHHHHHHHHHhhh
Confidence 234555667776654
No 110
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.16 E-value=1.9e-10 Score=109.48 Aligned_cols=106 Identities=18% Similarity=0.264 Sum_probs=61.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC-CCCC-----C-----C-------C------CC---cc-
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS-GVSS-----C-----D-------T------NS---IT- 189 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~-----~-----~-------~------~~---~~- 189 (394)
+.-|+|||.||++++...|..++..|+++||-|+++|+|.. +-.. . . . .. ..
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 44589999999999999999999999999999999999943 2110 0 0 0 00 00
Q ss_pred ------CHHHHHHHHHHHHHHh--------------------------CCCCcEEEEEeChHHHHHHHHHHhCCcccceE
Q 016141 190 ------SLEQYVKPLIDTFNEL--------------------------GNEEKVILVGHDFGGACISYVMELFPSKVAKA 237 (394)
Q Consensus 190 ------~~~~~~~~~~~~l~~l--------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 237 (394)
-++.-+.++..+++.+ +.+ ++.++|||+||.+++..+.+. .++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0111223344443332 122 799999999999999888865 679999
Q ss_pred EEeecccC
Q 016141 238 VFIAATML 245 (394)
Q Consensus 238 Vli~~~~~ 245 (394)
|++++...
T Consensus 256 I~LD~W~~ 263 (379)
T PF03403_consen 256 ILLDPWMF 263 (379)
T ss_dssp EEES---T
T ss_pred EEeCCccc
Confidence 99999754
No 111
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.16 E-value=3.4e-10 Score=99.58 Aligned_cols=165 Identities=22% Similarity=0.246 Sum_probs=90.3
Q ss_pred CCceEEEEcCCCCchhcHHHHH----HHHHhCCcEEEEecCCC-----CCCCCC------------------CC----CC
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTM----TLLKESGFKVDAVDLTG-----SGVSSC------------------DT----NS 187 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~----~~l~~~g~~v~~~d~~G-----~G~s~~------------------~~----~~ 187 (394)
.++.||++||++.+...|.... ..|.+.++..+.+|-|- -|.... .. ..
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4678999999999999986544 45555358888877541 111100 00 11
Q ss_pred ccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC--------CcccceEEEeecccCCCCcchHHHHHhhc
Q 016141 188 ITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELF--------PSKVAKAVFIAATMLTSGQSALDTISQQM 259 (394)
Q Consensus 188 ~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~--------p~~v~~lVli~~~~~~~~~~~~~~~~~~~ 259 (394)
...+++..+.|.++++..+. =..|+|+|.||.+|..++... ...++.+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~---------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD---------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-----------
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh----------
Confidence 34567777788888888773 247999999999998887532 1247888999886542110
Q ss_pred CchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEe
Q 016141 260 GSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIK 339 (394)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~ 339 (394)
+.... ....+++|+|.|+
T Consensus 151 --------------------------------------------------------~~~~~------~~~~i~iPtlHv~ 168 (212)
T PF03959_consen 151 --------------------------------------------------------YQELY------DEPKISIPTLHVI 168 (212)
T ss_dssp --------------------------------------------------------GTTTT--------TT---EEEEEE
T ss_pred --------------------------------------------------------hhhhh------ccccCCCCeEEEE
Confidence 00000 0112259999999
Q ss_pred cCCCCCCChHHHHHHHHhCCC-ceEEEEcCCCccCcccCh
Q 016141 340 TLQDCAIPVSVQEAMINSNPP-ELVFEIKGSDHAPFFSKP 378 (394)
Q Consensus 340 G~~D~~vp~~~~~~l~~~~~~-~~~~~i~~agH~~~~e~p 378 (394)
|++|.+++++..+.+.+.+.+ .+++..+ +||.+.....
T Consensus 169 G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 169 GENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp ETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred eCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 999999999999999988877 7888887 5999876643
No 112
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.13 E-value=7.2e-10 Score=97.53 Aligned_cols=99 Identities=19% Similarity=0.232 Sum_probs=62.6
Q ss_pred EEEEcCCCCch---hcHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH-----hCCCCcEEE
Q 016141 143 FVLVHGGGFGA---WCWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE-----LGNEEKVIL 213 (394)
Q Consensus 143 vvl~HG~~~~~---~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~-----l~~~~~~~l 213 (394)
||++||.+... .....++..+++ .|+.|+.+|+|=..... ....++|..+.+..+++. .+.+ +|+|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~----~p~~~~D~~~a~~~l~~~~~~~~~d~~-~i~l 75 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAP----FPAALEDVKAAYRWLLKNADKLGIDPE-RIVL 75 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSS----TTHHHHHHHHHHHHHHHTHHHHTEEEE-EEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccccc----ccccccccccceeeecccccccccccc-ceEE
Confidence 79999986543 334556666664 79999999999432211 122344444444444444 2334 9999
Q ss_pred EEeChHHHHHHHHHHhCCc----ccceEEEeecccCC
Q 016141 214 VGHDFGGACISYVMELFPS----KVAKAVFIAATMLT 246 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~----~v~~lVli~~~~~~ 246 (394)
+|+|.||.+|+.++....+ .++++++++|....
T Consensus 76 ~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 76 IGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 9999999999999875433 38999999996533
No 113
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.13 E-value=1.2e-09 Score=100.18 Aligned_cols=106 Identities=17% Similarity=0.081 Sum_probs=71.4
Q ss_pred CCCceEEEEcCCCCchhc-HHHH---------HHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh--
Q 016141 138 PETSHFVLVHGGGFGAWC-WYKT---------MTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL-- 205 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-~~~~---------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l-- 205 (394)
+.-|+||..|+++.+... .... ...++++||.|+..|.||.|.|.+..... ...-++|..++|+.+
T Consensus 18 ~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~--~~~e~~D~~d~I~W~~~ 95 (272)
T PF02129_consen 18 GPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM--SPNEAQDGYDTIEWIAA 95 (272)
T ss_dssp SSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT--SHHHHHHHHHHHHHHHH
T ss_pred CcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC--ChhHHHHHHHHHHHHHh
Confidence 445899999999865411 2111 12388999999999999999998765321 344445555555544
Q ss_pred -CC-CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 206 -GN-EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 206 -~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
.. +.+|.++|.|++|.+++.+|...|..++++|...+...
T Consensus 96 Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 96 QPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp CTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred CCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 22 14999999999999999999988888999999877653
No 114
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.12 E-value=1.1e-09 Score=113.01 Aligned_cols=218 Identities=12% Similarity=0.070 Sum_probs=117.1
Q ss_pred HHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCC-------------------CCcEEEEEeCh
Q 016141 158 KTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN-------------------EEKVILVGHDF 218 (394)
Q Consensus 158 ~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~-------------------~~~~~lvGhS~ 218 (394)
.+.++|..+||.|+..|.||+|.|.+... ... .+-.+|..++|+.+.- +.+|.++|.|+
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 35578899999999999999999987542 122 3344555555555530 24999999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhc------Cc-hHHHHHHHHHHHhcCCCCCCCcchhhHHHH
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQM------GS-NDLMQQAQIFLYANGKQNPPTSIDLDRTLL 291 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (394)
||++++.+|...|..++++|.+++.... .+.+.... .. ..-.............. ..... .....+
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~~-----yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~-~~~~~-~~~~~~ 420 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISSW-----YDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLL-AGDYL-RHNEAC 420 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCcH-----HHHhhcCCceeccCCcCCcchhhHHHHhhhcccC-cchhh-cchHHH
Confidence 9999999999888889999988775421 11111100 00 00000000001000000 00000 000000
Q ss_pred HHHhcccCCchhHHHHHHhccccCCcccccccc-cCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----CCceEEEE
Q 016141 292 RDLLFNRSAAKDVELALISMRPIPFAPVLEKLS-VSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN----PPELVFEI 366 (394)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~----~~~~~~~i 366 (394)
..... ... ........++..++.... ......+++|+|+|+|..|..++++....+.+.+ ...++++.
T Consensus 421 ~~~~~------~~~-~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~ 493 (767)
T PRK05371 421 EKLLA------ELT-AAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH 493 (767)
T ss_pred HHHHh------hhh-hhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe
Confidence 00000 000 000000011111222111 1123455799999999999999877665555544 24566655
Q ss_pred cCCCccCccc-ChHHHHHHHHHHHhhh
Q 016141 367 KGSDHAPFFS-KPRALHRILVEISKIT 392 (394)
Q Consensus 367 ~~agH~~~~e-~p~~v~~~i~~fl~~~ 392 (394)
+ ++|..... .+.++.+.+.+|+..+
T Consensus 494 ~-g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 494 Q-GGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred C-CCccCCCchhHHHHHHHHHHHHHhc
Confidence 5 58965433 4567778888888654
No 115
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.12 E-value=8.6e-10 Score=102.34 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=81.8
Q ss_pred CCceEEEEcCCCCchhcH-----HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHH-H----HHHHHHHHhCCC
Q 016141 139 ETSHFVLVHGGGFGAWCW-----YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYV-K----PLIDTFNELGNE 208 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~-----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~-~----~~~~~l~~l~~~ 208 (394)
.+++++++|.+-.....| ..++..|.++|+.|+.+++++-..+.. ..++++++ + .+..+.+..+.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~----~~~~edYi~e~l~~aid~v~~itg~~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA----AKNLEDYILEGLSEAIDTVKDITGQK 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh----hccHHHHHHHHHHHHHHHHHHHhCcc
Confidence 457899999987777766 468899999999999999998666643 34566665 3 444445555666
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCcc-cceEEEeecccCCC
Q 016141 209 EKVILVGHDFGGACISYVMELFPSK-VAKAVFIAATMLTS 247 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lVli~~~~~~~ 247 (394)
+|.++|||.||.++..+++.++.+ |++++++.+.....
T Consensus 182 -~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 182 -DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred -ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhc
Confidence 999999999999999998888887 99999998876543
No 116
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.11 E-value=2.4e-09 Score=95.81 Aligned_cols=204 Identities=21% Similarity=0.239 Sum_probs=119.5
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHH-hCCcE--E--EEecCCCC----CCCC----CC-------CCCccCHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLK-ESGFK--V--DAVDLTGS----GVSS----CD-------TNSITSLEQYVKP 197 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~-~~g~~--v--~~~d~~G~----G~s~----~~-------~~~~~~~~~~~~~ 197 (394)
....|.||+||++++...+..++..+. +.|.. + +-++--|+ |.-. .| .....+....+.+
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 345689999999999999999999997 65432 3 33333333 2111 11 1111467888888
Q ss_pred HHHHHHHh----CCCCcEEEEEeChHHHHHHHHHHhCCc-----ccceEEEeecccCCCCcchHHHHHhhcCchHHHHHH
Q 016141 198 LIDTFNEL----GNEEKVILVGHDFGGACISYVMELFPS-----KVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQA 268 (394)
Q Consensus 198 ~~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (394)
+..+|..| +++ ++.+|||||||..++.++..+-. ++.++|.|+++........... ...
T Consensus 89 l~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~---~~~-------- 156 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQ---NQN-------- 156 (255)
T ss_dssp HHHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-T---TTT--------
T ss_pred HHHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccc---hhh--------
Confidence 88888877 576 99999999999999999987532 4899999998764321100000 000
Q ss_pred HHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecC------C
Q 016141 269 QIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTL------Q 342 (394)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~------~ 342 (394)
...... .......+..+.. .. ...+. .++.+|-|.|. .
T Consensus 157 -----~~~~~g----p~~~~~~y~~l~~--------------~~-------~~~~p------~~i~VLnI~G~~~~g~~s 200 (255)
T PF06028_consen 157 -----DLNKNG----PKSMTPMYQDLLK--------------NR-------RKNFP------KNIQVLNIYGDLEDGSNS 200 (255)
T ss_dssp ------CSTT-----BSS--HHHHHHHH--------------TH-------GGGST------TT-EEEEEEEESBTTCSB
T ss_pred -----hhcccC----CcccCHHHHHHHH--------------HH-------HhhCC------CCeEEEEEecccCCCCCC
Confidence 000000 0001111111110 00 00110 14789999998 7
Q ss_pred CCCCChHHHHHHHHhCCC----ceEEEEcC--CCccCcccChHHHHHHHHHHHh
Q 016141 343 DCAIPVSVQEAMINSNPP----ELVFEIKG--SDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 343 D~~vp~~~~~~l~~~~~~----~~~~~i~~--agH~~~~e~p~~v~~~i~~fl~ 390 (394)
|..||...+..+...+.+ .+-.++.| +.|.-..|.+ +|.+.|.+||=
T Consensus 201 DG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 201 DGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp TSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred CeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 999999998888877754 34555654 6899888876 67799999983
No 117
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.08 E-value=6.2e-09 Score=91.06 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=71.5
Q ss_pred CCceEEEEcCCCCchhcHHHH--HHHHHh-CCcEEEEecCCCCCCCC--C---C---CCCccCHHHHHHHHHHHHHHhCC
Q 016141 139 ETSHFVLVHGGGFGAWCWYKT--MTLLKE-SGFKVDAVDLTGSGVSS--C---D---TNSITSLEQYVKPLIDTFNELGN 207 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~--~~~l~~-~g~~v~~~d~~G~G~s~--~---~---~~~~~~~~~~~~~~~~~l~~l~~ 207 (394)
..|.||++||.+.+...+... +..|++ +||-|+.|+........ . . .....+...++..|..+....++
T Consensus 15 ~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~i 94 (220)
T PF10503_consen 15 PVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNI 94 (220)
T ss_pred CCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhccc
Confidence 458999999999999877542 234554 58999999854221110 0 0 00111222233333344444444
Q ss_pred C-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 208 E-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 208 ~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+ .+|++.|+|.||+++..++..+|+.+.++..+++...
T Consensus 95 D~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 95 DPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred CCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 3 5999999999999999999999999999988887654
No 118
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.08 E-value=1.9e-09 Score=95.46 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHh--------CCcEEEEecCCCCCCCCCCCCCccCHHHHHH----HHHHHHHHh-
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKE--------SGFKVDAVDLTGSGVSSCDTNSITSLEQYVK----PLIDTFNEL- 205 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~--------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~----~~~~~l~~l- 205 (394)
.+.+|||+||.+++...|+.+...+.+ ..++++++|+......-. ...+.+.++ .+..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~----g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH----GRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc----cccHHHHHHHHHHHHHHHHHhhh
Confidence 567999999999999988888766622 248899999876432211 123333333 333344444
Q ss_pred ---CCCCcEEEEEeChHHHHHHHHHHhCC---cccceEEEeecccCCCC
Q 016141 206 ---GNEEKVILVGHDFGGACISYVMELFP---SKVAKAVFIAATMLTSG 248 (394)
Q Consensus 206 ---~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~lVli~~~~~~~~ 248 (394)
...++++||||||||.+|-.++...+ +.|+.+|.++++.....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 22359999999999999988876543 47999999999876543
No 119
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.08 E-value=1.8e-08 Score=86.71 Aligned_cols=202 Identities=15% Similarity=0.132 Sum_probs=103.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC-CCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS-GVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVIL 213 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~-G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~l 213 (394)
...++||+.+|++.....|..++.+|+..||+|+.||.-.| |.|++.. ..+++....+++..+++++ |.. ++.|
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I-~eftms~g~~sL~~V~dwl~~~g~~-~~GL 105 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI-NEFTMSIGKASLLTVIDWLATRGIR-RIGL 105 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B--------------HHHHHHHHHHHHHHHHHTT----EEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCCh-hhcchHHhHHHHHHHHHHHHhcCCC-cchh
Confidence 34589999999999999999999999999999999998866 8887765 4578888888887777766 666 8999
Q ss_pred EEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcC-CCCCCCcch-----h-
Q 016141 214 VGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANG-KQNPPTSID-----L- 286 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~- 286 (394)
+.-|+.|-+|+..|.+ . .+.-+|..-+.... ...+.. ...+-+... ....+...+ +
T Consensus 106 IAaSLSaRIAy~Va~~-i-~lsfLitaVGVVnl-----r~TLe~----------al~~Dyl~~~i~~lp~dldfeGh~l~ 168 (294)
T PF02273_consen 106 IAASLSARIAYEVAAD-I-NLSFLITAVGVVNL-----RDTLEK----------ALGYDYLQLPIEQLPEDLDFEGHNLG 168 (294)
T ss_dssp EEETTHHHHHHHHTTT-S---SEEEEES--S-H-----HHHHHH----------HHSS-GGGS-GGG--SEEEETTEEEE
T ss_pred hhhhhhHHHHHHHhhc-c-CcceEEEEeeeeeH-----HHHHHH----------HhccchhhcchhhCCCcccccccccc
Confidence 9999999999999984 3 36666665544321 111111 000000000 000000000 0
Q ss_pred hHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC--CceEE
Q 016141 287 DRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP--PELVF 364 (394)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~--~~~~~ 364 (394)
...++.+++......- ...... .+..++|++.+.+++|.+|.......+...+. ..+++
T Consensus 169 ~~vFv~dc~e~~w~~l--------------~ST~~~-----~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~kly 229 (294)
T PF02273_consen 169 AEVFVTDCFEHGWDDL--------------DSTIND-----MKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLY 229 (294)
T ss_dssp HHHHHHHHHHTT-SSH--------------HHHHHH-----HTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEE
T ss_pred hHHHHHHHHHcCCccc--------------hhHHHH-----HhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEE
Confidence 1123333332221111 111111 11225999999999999998888888887653 47899
Q ss_pred EEcCCCccCcccCh
Q 016141 365 EIKGSDHAPFFSKP 378 (394)
Q Consensus 365 ~i~~agH~~~~e~p 378 (394)
.++|++|..- |++
T Consensus 230 sl~Gs~HdL~-enl 242 (294)
T PF02273_consen 230 SLPGSSHDLG-ENL 242 (294)
T ss_dssp EETT-SS-TT-SSH
T ss_pred EecCccchhh-hCh
Confidence 9999999875 444
No 120
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=1.4e-09 Score=94.83 Aligned_cols=209 Identities=18% Similarity=0.177 Sum_probs=124.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCC----CCC----------------ccCHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCD----TNS----------------ITSLEQYVKP 197 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~----~~~----------------~~~~~~~~~~ 197 (394)
+.-|.||-.||++++...|..+.. ++..||.|+.+|-||.|.|..+ +.. .+-+.....|
T Consensus 81 ~~~P~vV~fhGY~g~~g~~~~~l~-wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D 159 (321)
T COG3458 81 GKLPAVVQFHGYGGRGGEWHDMLH-WAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLD 159 (321)
T ss_pred CccceEEEEeeccCCCCCcccccc-ccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHH
Confidence 456899999999999998877654 3455999999999999988431 111 0111223334
Q ss_pred HHHHHHHh-C----CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHH
Q 016141 198 LIDTFNEL-G----NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFL 272 (394)
Q Consensus 198 ~~~~l~~l-~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (394)
+..+++.+ + .+++|.+.|.|.||.+++.+++..| +|++++.+-|....-.. +. .. ....-...+..
T Consensus 160 ~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r-~i----~~-~~~~~ydei~~-- 230 (321)
T COG3458 160 AVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPR-AI----EL-ATEGPYDEIQT-- 230 (321)
T ss_pred HHHHHHHHhccCccchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchh-he----ee-cccCcHHHHHH--
Confidence 44444433 1 1249999999999999999998654 79998887776532110 00 00 00000011111
Q ss_pred HhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHH
Q 016141 273 YANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQE 352 (394)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~ 352 (394)
++....+.+. .....+...+...+..++ ++|+|+..|-.|.++|+..+-
T Consensus 231 ---------------------y~k~h~~~e~--~v~~TL~yfD~~n~A~Ri--------K~pvL~svgL~D~vcpPstqF 279 (321)
T COG3458 231 ---------------------YFKRHDPKEA--EVFETLSYFDIVNLAARI--------KVPVLMSVGLMDPVCPPSTQF 279 (321)
T ss_pred ---------------------HHHhcCchHH--HHHHHHhhhhhhhHHHhh--------ccceEEeecccCCCCCChhhH
Confidence 1111111111 011111112222333333 699999999999999999888
Q ss_pred HHHHhCCC-ceEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 353 AMINSNPP-ELVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 353 ~l~~~~~~-~~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
.+.+.++. .++.+++.-+|.- -|.-..+.+..|++
T Consensus 280 A~yN~l~~~K~i~iy~~~aHe~---~p~~~~~~~~~~l~ 315 (321)
T COG3458 280 AAYNALTTSKTIEIYPYFAHEG---GPGFQSRQQVHFLK 315 (321)
T ss_pred HHhhcccCCceEEEeecccccc---CcchhHHHHHHHHH
Confidence 88888875 6777888767753 34444455566654
No 121
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.06 E-value=1.9e-10 Score=105.51 Aligned_cols=94 Identities=21% Similarity=0.179 Sum_probs=67.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC--CCc--cC---HHHHHHHHHHHHHHh-----
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT--NSI--TS---LEQYVKPLIDTFNEL----- 205 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~--~~~--~~---~~~~~~~~~~~l~~l----- 205 (394)
...|.|||.||.|+....|..+++.|++.||-|.++|++|...-..+. ... +. +.+...|+..+|+.|
T Consensus 69 ~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 69 YLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred CcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 456899999999999999999999999999999999999953222111 110 11 223333444444433
Q ss_pred --------CCCCcEEEEEeChHHHHHHHHHHhCCc
Q 016141 206 --------GNEEKVILVGHDFGGACISYVMELFPS 232 (394)
Q Consensus 206 --------~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 232 (394)
+.. +|.++|||+||+.++.++..+.+
T Consensus 149 sP~l~~~ld~~-~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 149 SPALAGRLDPQ-RVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred CcccccccCcc-ceEEEecccccHHHHHhcccccc
Confidence 233 89999999999999998875544
No 122
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.05 E-value=4.7e-09 Score=88.09 Aligned_cols=98 Identities=22% Similarity=0.294 Sum_probs=78.4
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----CCCCcEEEEEe
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----GNEEKVILVGH 216 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvGh 216 (394)
..+||+-|=|+-...=..++..|+++|+.|+.+|-+-|=.+ ..+.++.+.|+..++++. +.+ +++|+|+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~------~rtP~~~a~Dl~~~i~~y~~~w~~~-~vvLiGY 75 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWS------ERTPEQTAADLARIIRHYRARWGRK-RVVLIGY 75 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhh------hCCHHHHHHHHHHHHHHHHHHhCCc-eEEEEee
Confidence 35788888777766667788999999999999997655544 246788888888887665 555 9999999
Q ss_pred ChHHHHHHHHHHhCCc----ccceEEEeecccC
Q 016141 217 DFGGACISYVMELFPS----KVAKAVFIAATML 245 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~----~v~~lVli~~~~~ 245 (394)
|+|+-+......+.|. +|..++|+++...
T Consensus 76 SFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 76 SFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred cCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 9999998888887774 6999999998653
No 123
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.05 E-value=8.5e-10 Score=97.80 Aligned_cols=105 Identities=18% Similarity=0.198 Sum_probs=75.9
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH-h------CCCCc
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE-L------GNEEK 210 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~-l------~~~~~ 210 (394)
+.=|+|||+||+......|..+.++++++||-|+++|+...+... .........+.++++.+-++. + +.. +
T Consensus 15 g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~-~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s-~ 92 (259)
T PF12740_consen 15 GTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD-DTDEVASAAEVIDWLAKGLESKLPLGVKPDFS-K 92 (259)
T ss_pred CCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC-cchhHHHHHHHHHHHHhcchhhcccccccccc-c
Confidence 345899999999988888999999999999999999976644311 111222333333333322221 1 233 8
Q ss_pred EEEEEeChHHHHHHHHHHhC-----CcccceEEEeeccc
Q 016141 211 VILVGHDFGGACISYVMELF-----PSKVAKAVFIAATM 244 (394)
Q Consensus 211 ~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lVli~~~~ 244 (394)
+.|.|||-||-+|..++..+ +.+++++|+++|.-
T Consensus 93 l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 93 LALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred eEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 99999999999999999887 55899999999975
No 124
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.04 E-value=1.3e-09 Score=91.11 Aligned_cols=199 Identities=11% Similarity=0.127 Sum_probs=118.1
Q ss_pred cCCCCCceEEEEcCCCC---chhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 135 IESPETSHFVLVHGGGF---GAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 135 ~~~~~~~~vvl~HG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
......+..||+||.-. +.......+.-+.+.||+|..++ ++.+.....-..++.++..-+.-+++.....+.+
T Consensus 62 g~~~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvg---Y~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l 138 (270)
T KOG4627|consen 62 GSTNQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVG---YNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVL 138 (270)
T ss_pred cCCCCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEec---cCcCcccccHHHHHHHHHHHHHHHHHhcccceeE
Confidence 33566789999999632 22223344555667799999885 4555432212234444445555555655444478
Q ss_pred EEEEeChHHHHHHHHHHh-CCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHH
Q 016141 212 ILVGHDFGGACISYVMEL-FPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTL 290 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~-~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (394)
.+-|||.|+.+|..+..+ +..+|.+++++++..... ..... . .. ....+
T Consensus 139 ~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~---------EL~~t-------------e-~g---~dlgL---- 188 (270)
T KOG4627|consen 139 TFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLR---------ELSNT-------------E-SG---NDLGL---- 188 (270)
T ss_pred EEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHH---------HHhCC-------------c-cc---cccCc----
Confidence 888999999999887765 445799999988765311 00000 0 00 00000
Q ss_pred HHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCC
Q 016141 291 LRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSD 370 (394)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~ag 370 (394)
........ ..+ ...+.. .++|+|++.|+.|.-.-.+..+.+......+.+..+++.+
T Consensus 189 ---------t~~~ae~~-----Scd-l~~~~~--------v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~ 245 (270)
T KOG4627|consen 189 ---------TERNAESV-----SCD-LWEYTD--------VTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYD 245 (270)
T ss_pred ---------ccchhhhc-----Ccc-HHHhcC--------ceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcc
Confidence 00000000 000 011122 2589999999999876677888899888889999999999
Q ss_pred ccCcccC----hHHHHHHHHHHH
Q 016141 371 HAPFFSK----PRALHRILVEIS 389 (394)
Q Consensus 371 H~~~~e~----p~~v~~~i~~fl 389 (394)
|+-.++. -..+...+.+|+
T Consensus 246 hy~I~~~~~~~~s~~~~~~~~~~ 268 (270)
T KOG4627|consen 246 HYDIIEETAIDDSDVSRFLRNIE 268 (270)
T ss_pred hhhHHHHhccccchHHHHHHHHh
Confidence 9977664 234455555554
No 125
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.03 E-value=3e-08 Score=92.80 Aligned_cols=106 Identities=18% Similarity=0.159 Sum_probs=71.6
Q ss_pred CCCceEEEEcCCCCch---hcH-HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH---hCCC-C
Q 016141 138 PETSHFVLVHGGGFGA---WCW-YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE---LGNE-E 209 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~---~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~---l~~~-~ 209 (394)
...|+||++||.+... ... ..+...+...|+.|+.+|+|-.-.-.. ...++|..+.+..+.++ ++.+ +
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~----p~~~~d~~~a~~~l~~~~~~~g~dp~ 152 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPF----PAALEDAYAAYRWLRANAAELGIDPS 152 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCC----CchHHHHHHHHHHHHhhhHhhCCCcc
Confidence 4579999999985543 334 444555666799999999985444322 23455544433333333 4432 4
Q ss_pred cEEEEEeChHHHHHHHHHHhCCc----ccceEEEeecccCCC
Q 016141 210 KVILVGHDFGGACISYVMELFPS----KVAKAVFIAATMLTS 247 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lVli~~~~~~~ 247 (394)
+|+++|+|.||.+++.++..-.+ .....+++.|.....
T Consensus 153 ~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 153 RIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred ceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 89999999999999998876443 478889999876543
No 126
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.02 E-value=3.2e-08 Score=84.25 Aligned_cols=176 Identities=19% Similarity=0.108 Sum_probs=113.3
Q ss_pred CCceEEEEcCCCCchhcHHH----HHHHHHhCCcEEEEecCCC------CCCCCC------C-----------------C
Q 016141 139 ETSHFVLVHGGGFGAWCWYK----TMTLLKESGFKVDAVDLTG------SGVSSC------D-----------------T 185 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~----~~~~l~~~g~~v~~~d~~G------~G~s~~------~-----------------~ 185 (394)
.++-|||+||+-.+...|.. +-..|.+. +..+.+|-|- .-.+.. + .
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~ 82 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASF 82 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccccc
Confidence 45789999999999888753 44455555 6777776662 100000 0 0
Q ss_pred CCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC--C----c--ccceEEEeecccCCCCcchHHHHHh
Q 016141 186 NSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELF--P----S--KVAKAVFIAATMLTSGQSALDTISQ 257 (394)
Q Consensus 186 ~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~--p----~--~v~~lVli~~~~~~~~~~~~~~~~~ 257 (394)
.....++.-.+-|...+.+.|.= =.|+|+|.|+.++..++... . + .++-+|++++.......
T Consensus 83 ~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~-------- 152 (230)
T KOG2551|consen 83 TEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK-------- 152 (230)
T ss_pred ccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch--------
Confidence 12234455566677777777742 16999999999998888721 1 1 26778888876532100
Q ss_pred hcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEE
Q 016141 258 QMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFY 337 (394)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLi 337 (394)
+.... ... .+++|.|.
T Consensus 153 ---------------------------------~~~~~-----------------------~~~--------~i~~PSLH 168 (230)
T KOG2551|consen 153 ---------------------------------LDESA-----------------------YKR--------PLSTPSLH 168 (230)
T ss_pred ---------------------------------hhhhh-----------------------hcc--------CCCCCeeE
Confidence 00000 001 12599999
Q ss_pred EecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccCh--HHHHHHHHHHHh
Q 016141 338 IKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKP--RALHRILVEISK 390 (394)
Q Consensus 338 i~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p--~~v~~~i~~fl~ 390 (394)
|.|+.|.++|...++.+++.+++..++.-+ +||++.-.++ +.+.+.|..|++
T Consensus 169 i~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~~ 222 (230)
T KOG2551|consen 169 IFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFLQ 222 (230)
T ss_pred EecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999666666 5999987763 344444444444
No 127
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.96 E-value=6.3e-08 Score=94.86 Aligned_cols=107 Identities=15% Similarity=0.133 Sum_probs=75.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHHH------------------HHHhCCcEEEEecCC-CCCCCCCCCC-CccCHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMT------------------LLKESGFKVDAVDLT-GSGVSSCDTN-SITSLEQYVKP 197 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~------------------~l~~~g~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~ 197 (394)
.+.|+||+++|.++.+..+.-+.+ .+.+. .+++.+|.| |+|.|..... ...+.++.++|
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~-~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d 153 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNE-AYVIYVDQPAGVGFSYADKADYDHNESEVSED 153 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccc-cCeEEEeCCCCcCcccCCCCCCCCChHHHHHH
Confidence 456999999999888876532210 12222 678999975 9998865432 23556788888
Q ss_pred HHHHHHHh-------CCCCcEEEEEeChHHHHHHHHHHhC----------CcccceEEEeecccCC
Q 016141 198 LIDTFNEL-------GNEEKVILVGHDFGGACISYVMELF----------PSKVAKAVFIAATMLT 246 (394)
Q Consensus 198 ~~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~----------p~~v~~lVli~~~~~~ 246 (394)
+..++..+ +. .+++|+|||+||.++..+|.+. .-.++++++.++....
T Consensus 154 ~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 154 MYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 88888753 23 4999999999999988887652 1247888888876543
No 128
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.92 E-value=1.1e-08 Score=90.84 Aligned_cols=108 Identities=20% Similarity=0.219 Sum_probs=73.5
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCC------CCCC----------------Cc------c
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS------CDTN----------------SI------T 189 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~------~~~~----------------~~------~ 189 (394)
.+=|.|||.||+|++...|..+.-.|+++||-|.++++|-+-... .+.. .. .
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 344899999999999999999999999999999999998764331 0000 00 0
Q ss_pred CHHHHHHHHH---HHHHHhC----------------------C-CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecc
Q 016141 190 SLEQYVKPLI---DTFNELG----------------------N-EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAAT 243 (394)
Q Consensus 190 ~~~~~~~~~~---~~l~~l~----------------------~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~ 243 (394)
.+-.-+..+. .+|+.++ + ..++.++|||+||++++.....+. .+++.|++++.
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 0111122222 2222221 1 136899999999999988877554 58999999987
Q ss_pred cCC
Q 016141 244 MLT 246 (394)
Q Consensus 244 ~~~ 246 (394)
+.+
T Consensus 275 M~P 277 (399)
T KOG3847|consen 275 MFP 277 (399)
T ss_pred ecc
Confidence 654
No 129
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.92 E-value=1e-07 Score=82.26 Aligned_cols=243 Identities=14% Similarity=0.127 Sum_probs=141.3
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhC-C--cEEEEecCCCCCCCC---C-----CCCCccCHHHHHHHHHHHHHHh
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKES-G--FKVDAVDLTGSGVSS---C-----DTNSITSLEQYVKPLIDTFNEL 205 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~-g--~~v~~~d~~G~G~s~---~-----~~~~~~~~~~~~~~~~~~l~~l 205 (394)
..+++.|++++|.++....|..++..|... + +.++.+-+.||-.-. . .....++++++++.-.++++..
T Consensus 26 ~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~ 105 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEY 105 (301)
T ss_pred CCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHh
Confidence 367789999999999999999999887653 2 558888888886543 1 1225689999999888888776
Q ss_pred C-CCCcEEEEEeChHHHHHHHHHHhC--CcccceEEEeecccCC-----CCcchHH---HHH---------hhcCchHHH
Q 016141 206 G-NEEKVILVGHDFGGACISYVMELF--PSKVAKAVFIAATMLT-----SGQSALD---TIS---------QQMGSNDLM 265 (394)
Q Consensus 206 ~-~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~lVli~~~~~~-----~~~~~~~---~~~---------~~~~~~~~~ 265 (394)
- -+.+++++|||-|+++.+.+.... --.|.+++++=|.... .+..... .+. .....+...
T Consensus 106 ~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 106 VPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred CCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3 335999999999999999988632 2258888887775421 1110000 000 001111222
Q ss_pred HHHHHHHHhcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCC
Q 016141 266 QQAQIFLYANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCA 345 (394)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~ 345 (394)
+.....+.......+.....-...... .........+.......... ....-.....+-+.+.+|..|.+
T Consensus 186 r~~Li~~~l~~~n~p~e~l~tal~l~h---------~~v~rn~v~la~qEm~eV~~-~d~e~~een~d~l~Fyygt~DgW 255 (301)
T KOG3975|consen 186 RFILIKFMLCGSNGPQEFLSTALFLTH---------PQVVRNSVGLAAQEMEEVTT-RDIEYCEENLDSLWFYYGTNDGW 255 (301)
T ss_pred HHHHHHHhcccCCCcHHHHhhHHHhhc---------HHHHHHHhhhchHHHHHHHH-hHHHHHHhcCcEEEEEccCCCCC
Confidence 222211111111111111100000000 00000000000000000000 00000011126788999999999
Q ss_pred CChHHHHHHHHhCCCce--EEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 346 IPVSVQEAMINSNPPEL--VFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 346 vp~~~~~~l~~~~~~~~--~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
||.+....+.+.+|..+ +-+ ++..|.+...+.+..+..+.+.++
T Consensus 256 ~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~~ 301 (301)
T KOG3975|consen 256 VPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMIQ 301 (301)
T ss_pred cchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhhC
Confidence 99999999999998654 444 778999999999999998888763
No 130
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.90 E-value=2.4e-08 Score=103.07 Aligned_cols=199 Identities=16% Similarity=0.179 Sum_probs=126.3
Q ss_pred CceEEEEcCCCCchhc-------HHHHHHHHHhCCcEEEEecCCCCCCCCCCC-------CCccCHHHHHHHHHHHHHHh
Q 016141 140 TSHFVLVHGGGFGAWC-------WYKTMTLLKESGFKVDAVDLTGSGVSSCDT-------NSITSLEQYVKPLIDTFNEL 205 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~-------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~~l~~l 205 (394)
-|.||.+||.+++... |... .....|+.|+.+|.||.|...... -+....+|+...+..+++..
T Consensus 526 yPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~ 603 (755)
T KOG2100|consen 526 YPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLP 603 (755)
T ss_pred CCEEEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcc
Confidence 4788889998873322 4333 455679999999999998765321 13456777777777777766
Q ss_pred CCC-CcEEEEEeChHHHHHHHHHHhCCcc-cceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCc
Q 016141 206 GNE-EKVILVGHDFGGACISYVMELFPSK-VAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTS 283 (394)
Q Consensus 206 ~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~-v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (394)
-++ +++.|+|+|+||++++.++...|+. +++.|.++|.....- .+.
T Consensus 604 ~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~---yds----------------------------- 651 (755)
T KOG2100|consen 604 FIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLY---YDS----------------------------- 651 (755)
T ss_pred cccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeee---ecc-----------------------------
Confidence 443 4999999999999999999988844 555599998764210 000
Q ss_pred chhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcC-EEEEecCCCCCCChHHHHHHHHhCC---
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVP-RFYIKTLQDCAIPVSVQEAMINSNP--- 359 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~P-vLii~G~~D~~vp~~~~~~l~~~~~--- 359 (394)
...+.+.+........ +...........+ +.| .|++||+.|.-|..+....+.+.+.
T Consensus 652 ------~~terymg~p~~~~~~-----y~e~~~~~~~~~~--------~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~g 712 (755)
T KOG2100|consen 652 ------TYTERYMGLPSENDKG-----YEESSVSSPANNI--------KTPKLLLIHGTEDDNVHFQQSAILIKALQNAG 712 (755)
T ss_pred ------cccHhhcCCCccccch-----hhhccccchhhhh--------ccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCC
Confidence 0000000000000000 0000011111111 244 5999999999998887766665542
Q ss_pred -CceEEEEcCCCccCcccCh-HHHHHHHHHHHhh
Q 016141 360 -PELVFEIKGSDHAPFFSKP-RALHRILVEISKI 391 (394)
Q Consensus 360 -~~~~~~i~~agH~~~~e~p-~~v~~~i~~fl~~ 391 (394)
..++.++|+.+|.+..-.. ..+...+..|+..
T Consensus 713 v~~~~~vypde~H~is~~~~~~~~~~~~~~~~~~ 746 (755)
T KOG2100|consen 713 VPFRLLVYPDENHGISYVEVISHLYEKLDRFLRD 746 (755)
T ss_pred CceEEEEeCCCCcccccccchHHHHHHHHHHHHH
Confidence 2789999999999876553 6678888888873
No 131
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.90 E-value=3e-07 Score=85.41 Aligned_cols=221 Identities=18% Similarity=0.141 Sum_probs=123.3
Q ss_pred CCCceEEEEcCCCCch-----hcHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH------h
Q 016141 138 PETSHFVLVHGGGFGA-----WCWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE------L 205 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~-----~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~------l 205 (394)
...|.||++||+|... ..|..+...++. .+..|+.+|+|=--+...| ..++|-.+.+..+++. .
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~P----a~y~D~~~Al~w~~~~~~~~~~~ 163 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFP----AAYDDGWAALKWVLKNSWLKLGA 163 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCC----ccchHHHHHHHHHHHhHHHHhCC
Confidence 4568999999986543 347778877754 4889999999854443333 3455555555555553 2
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhC------CcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCC
Q 016141 206 GNEEKVILVGHDFGGACISYVMELF------PSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQN 279 (394)
Q Consensus 206 ~~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (394)
+.+ +|+|+|-|.||.+|..+|.+. +-++++.|++-|............-................+
T Consensus 164 D~~-rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~------- 235 (336)
T KOG1515|consen 164 DPS-RVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKW------- 235 (336)
T ss_pred Ccc-cEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHH-------
Confidence 344 899999999999998888652 357999999999875533221111100111111111111111
Q ss_pred CCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCC-cCEEEEecCCCCCCCh--HHHHHHHH
Q 016141 280 PPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGS-VPRFYIKTLQDCAIPV--SVQEAMIN 356 (394)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~PvLii~G~~D~~vp~--~~~~~l~~ 356 (394)
++..+-+.....+ .....+... .......... .|+|++.++.|.+... ..++++.+
T Consensus 236 -----------w~~~lP~~~~~~~----~p~~np~~~------~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk 294 (336)
T KOG1515|consen 236 -----------WRLLLPNGKTDLD----HPFINPVGN------SLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKK 294 (336)
T ss_pred -----------HHHhCCCCCCCcC----Ccccccccc------ccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHH
Confidence 1100000000000 000000000 0000011112 4599999999988743 33455655
Q ss_pred hCCCceEEEEcCCCccCcccCh-----HHHHHHHHHHHhh
Q 016141 357 SNPPELVFEIKGSDHAPFFSKP-----RALHRILVEISKI 391 (394)
Q Consensus 357 ~~~~~~~~~i~~agH~~~~e~p-----~~v~~~i~~fl~~ 391 (394)
..-.+++..++++.|.++.-.| .++.+.+.+|+++
T Consensus 295 ~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~ 334 (336)
T KOG1515|consen 295 AGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKS 334 (336)
T ss_pred cCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhh
Confidence 5445677789999998776554 4666777788764
No 132
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.87 E-value=7.8e-09 Score=89.94 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=77.1
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh-------CCCC
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL-------GNEE 209 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l-------~~~~ 209 (394)
.+.=|+|+|+||+.-....|..+..+++++||-|+++++-..-. .....+..+....++++..-+..+ ++.
T Consensus 43 ~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~-p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~- 120 (307)
T PF07224_consen 43 AGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFP-PDGQDEIKSAASVINWLPEGLQHVLPENVEANLS- 120 (307)
T ss_pred CCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccC-CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccc-
Confidence 45568999999999999999999999999999999999875321 101112223333333444333333 244
Q ss_pred cEEEEEeChHHHHHHHHHHhCC--cccceEEEeecccC
Q 016141 210 KVILVGHDFGGACISYVMELFP--SKVAKAVFIAATML 245 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lVli~~~~~ 245 (394)
++.++|||.||.+|..+|..+. -++.++|.++|...
T Consensus 121 klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G 158 (307)
T PF07224_consen 121 KLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAG 158 (307)
T ss_pred eEEEeecCCccHHHHHHHhcccccCchhheecccccCC
Confidence 8999999999999999998763 24888999998754
No 133
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.86 E-value=1.9e-07 Score=81.41 Aligned_cols=97 Identities=19% Similarity=0.151 Sum_probs=72.7
Q ss_pred EEcCCC--CchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHH
Q 016141 145 LVHGGG--FGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGAC 222 (394)
Q Consensus 145 l~HG~~--~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~ 222 (394)
++|+.+ ++...|..+...|... +.|+++|.+|++.+... ..+++++++.+...+.......+++++|||+||.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~-~~v~~~~~~g~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~ 77 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGR-RDVSALPLPGFGPGEPL---PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLL 77 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCC-ccEEEecCCCCCCCCCC---CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHH
Confidence 445544 6777899999999875 99999999999866432 24677777766655544332348999999999999
Q ss_pred HHHHHHh---CCcccceEEEeecccC
Q 016141 223 ISYVMEL---FPSKVAKAVFIAATML 245 (394)
Q Consensus 223 a~~~a~~---~p~~v~~lVli~~~~~ 245 (394)
+...+.+ .++.+.+++++++...
T Consensus 78 a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 78 AHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred HHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 9888875 4567999999887553
No 134
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.86 E-value=2.3e-08 Score=85.11 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=113.8
Q ss_pred ceEEEEcCC-CCchhcHHHHHHHHHhCCcEEEEecCC-CCCCCCCCCC-------CccCHHHHHHHHHHHHHH---hCCC
Q 016141 141 SHFVLVHGG-GFGAWCWYKTMTLLKESGFKVDAVDLT-GSGVSSCDTN-------SITSLEQYVKPLIDTFNE---LGNE 208 (394)
Q Consensus 141 ~~vvl~HG~-~~~~~~~~~~~~~l~~~g~~v~~~d~~-G~G~s~~~~~-------~~~~~~~~~~~~~~~l~~---l~~~ 208 (394)
..||++--+ |.....-+..+..++..||.|++||+- |--.+..... ...+.+-.-.++..+++. .+..
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 356666555 444445778888999999999999964 4222221000 112223333344444444 4544
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhH
Q 016141 209 EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDR 288 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (394)
.++.++|++|||.++..+....| .+.+++..-|.....
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d~----------------------------------------- 157 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVDS----------------------------------------- 157 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCCh-----------------------------------------
Confidence 59999999999999998888777 577777665543210
Q ss_pred HHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCC-----ceE
Q 016141 289 TLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPP-----ELV 363 (394)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~-----~~~ 363 (394)
. .....++|+|++.|+.|.++|+.....+.+.+.. .++
T Consensus 158 ---~----------------------------------D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v 200 (242)
T KOG3043|consen 158 ---A----------------------------------DIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQV 200 (242)
T ss_pred ---h----------------------------------HHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeE
Confidence 0 0011259999999999999999988777776532 479
Q ss_pred EEEcCCCccCcc-----cCh------HHHHHHHHHHHhhh
Q 016141 364 FEIKGSDHAPFF-----SKP------RALHRILVEISKIT 392 (394)
Q Consensus 364 ~~i~~agH~~~~-----e~p------~~v~~~i~~fl~~~ 392 (394)
.+++|.+|.++. +.| |+..+.+.+|++..
T Consensus 201 ~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 201 KTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred EEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 999999998773 233 45667777887764
No 135
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.82 E-value=5.1e-08 Score=82.47 Aligned_cols=172 Identities=15% Similarity=0.166 Sum_probs=113.4
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCC---------C--------CCCCccCHHHHHHHHHHHH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSS---------C--------DTNSITSLEQYVKPLIDTF 202 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~---------~--------~~~~~~~~~~~~~~~~~~l 202 (394)
..+||++||.+.+...|..++..|.-.....|+|.-|-.-.+. . -......+...++.+..++
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 3589999999999999988888877666777877444221110 0 0012334555666677777
Q ss_pred HHh---CCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCC
Q 016141 203 NEL---GNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQ 278 (394)
Q Consensus 203 ~~l---~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (394)
+.. +++ .++.+-|.|+||.++++.+..+|..+.+++-..+........
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~~---------------------------- 134 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASIG---------------------------- 134 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchhh----------------------------
Confidence 664 332 478999999999999999999988888888776654311000
Q ss_pred CCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHH--
Q 016141 279 NPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMIN-- 356 (394)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~-- 356 (394)
+...... .. ..|++..||+.|++||....+...+
T Consensus 135 ------------~~~~~~~----------------------~~----------~~~i~~~Hg~~d~~vp~~~g~~s~~~l 170 (206)
T KOG2112|consen 135 ------------LPGWLPG----------------------VN----------YTPILLCHGTADPLVPFRFGEKSAQFL 170 (206)
T ss_pred ------------ccCCccc----------------------cC----------cchhheecccCCceeehHHHHHHHHHH
Confidence 0000000 00 2899999999999999876554443
Q ss_pred --hCCCceEEEEcCCCccCcccChHHHHH
Q 016141 357 --SNPPELVFEIKGSDHAPFFSKPRALHR 383 (394)
Q Consensus 357 --~~~~~~~~~i~~agH~~~~e~p~~v~~ 383 (394)
....+++..++|-+|...-+.-+++..
T Consensus 171 ~~~~~~~~f~~y~g~~h~~~~~e~~~~~~ 199 (206)
T KOG2112|consen 171 KSLGVRVTFKPYPGLGHSTSPQELDDLKS 199 (206)
T ss_pred HHcCCceeeeecCCccccccHHHHHHHHH
Confidence 333478899999999766544444333
No 136
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.80 E-value=2.7e-08 Score=96.08 Aligned_cols=96 Identities=22% Similarity=0.310 Sum_probs=72.6
Q ss_pred CchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCC-ccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHh
Q 016141 151 FGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNS-ITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 151 ~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
.....|..+++.|.+.||.+ ..|++|+|.+.+.... ...++++.+.|.++.+..+.. +++|+||||||.+++.++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGK-KVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhHHHHHHHHHH
Confidence 45688999999999999765 8899999998765321 122344444445555555665 99999999999999999998
Q ss_pred CCcc----cceEEEeecccCCCC
Q 016141 230 FPSK----VAKAVFIAATMLTSG 248 (394)
Q Consensus 230 ~p~~----v~~lVli~~~~~~~~ 248 (394)
+|+. |+++|.++++.....
T Consensus 183 ~p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CCHhHHhHhccEEEECCCCCCCc
Confidence 8864 789999998765543
No 137
>PRK04940 hypothetical protein; Provisional
Probab=98.75 E-value=1.5e-06 Score=72.92 Aligned_cols=171 Identities=9% Similarity=0.149 Sum_probs=96.0
Q ss_pred EEEEcCCCCchhc--HHHHH-HHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEEEEe
Q 016141 143 FVLVHGGGFGAWC--WYKTM-TLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVILVGH 216 (394)
Q Consensus 143 vvl~HG~~~~~~~--~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvGh 216 (394)
||++||+.+++.. ..... ..+ .-..+++ +++ .....+.++.+.+.+..+ +..+++.|||+
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~-~p~~~~~--~l~-----------~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGS 67 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFI-DPDVRLI--SYS-----------TLHPKHDMQHLLKEVDKMLQLSDDERPLICGV 67 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheee-CCCCeEE--ECC-----------CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEe
Confidence 7999999998887 53211 122 1123332 221 123444444555555432 11137999999
Q ss_pred ChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcchhhHHHHHHHhc
Q 016141 217 DFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSIDLDRTLLRDLLF 296 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (394)
|+||+.|..+|.++. + ..|+++|+..+. ..+...... ......+...-+.+.
T Consensus 68 SLGGyyA~~La~~~g--~-~aVLiNPAv~P~-----~~L~~~ig~------------------~~~y~~~~~~h~~eL-- 119 (180)
T PRK04940 68 GLGGYWAERIGFLCG--I-RQVIFNPNLFPE-----ENMEGKIDR------------------PEEYADIATKCVTNF-- 119 (180)
T ss_pred ChHHHHHHHHHHHHC--C-CEEEECCCCChH-----HHHHHHhCC------------------CcchhhhhHHHHHHh--
Confidence 999999999999875 3 678899987541 111110000 000001111111110
Q ss_pred ccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCCCc-eEEEEcCCCccCcc
Q 016141 297 NRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNPPE-LVFEIKGSDHAPFF 375 (394)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~~agH~~~~ 375 (394)
. +. ..-..+++..+.|.++....+... +.+. ++++.+|++|-+
T Consensus 120 ---------------~----------~~------~p~r~~vllq~gDEvLDyr~a~~~---y~~~y~~~v~~GGdH~f-- 163 (180)
T PRK04940 120 ---------------R----------EK------NRDRCLVILSRNDEVLDSQRTAEE---LHPYYEIVWDEEQTHKF-- 163 (180)
T ss_pred ---------------h----------hc------CcccEEEEEeCCCcccCHHHHHHH---hccCceEEEECCCCCCC--
Confidence 0 00 013468999999999987655433 3444 688889888863
Q ss_pred cChHHHHHHHHHHHhh
Q 016141 376 SKPRALHRILVEISKI 391 (394)
Q Consensus 376 e~p~~v~~~i~~fl~~ 391 (394)
++-++....|.+|+++
T Consensus 164 ~~fe~~l~~I~~F~~~ 179 (180)
T PRK04940 164 KNISPHLQRIKAFKTL 179 (180)
T ss_pred CCHHHHHHHHHHHHhc
Confidence 5556688888888854
No 138
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.73 E-value=2e-08 Score=87.77 Aligned_cols=88 Identities=28% Similarity=0.328 Sum_probs=52.4
Q ss_pred ceEEEEcCCCC-chhcHHHHHHHHHhCCcE---EEEecCCCCCCCCCCCCC---ccCHHHHHHHHHHHHHHhCCCCcEEE
Q 016141 141 SHFVLVHGGGF-GAWCWYKTMTLLKESGFK---VDAVDLTGSGVSSCDTNS---ITSLEQYVKPLIDTFNELGNEEKVIL 213 (394)
Q Consensus 141 ~~vvl~HG~~~-~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~---~~~~~~~~~~~~~~l~~l~~~~~~~l 213 (394)
.||||+||.++ ....|..+++.|.++||. |+++++-........... ..+..++.+-|..++.+-+- +|.|
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa--kVDI 79 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA--KVDI 79 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT----EEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC--EEEE
Confidence 48999999998 567899999999999999 799998443332111000 11122333344444445563 8999
Q ss_pred EEeChHHHHHHHHHHhC
Q 016141 214 VGHDFGGACISYVMELF 230 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~ 230 (394)
|||||||.++-.+....
T Consensus 80 VgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 80 VGHSMGGTIARYYIKGG 96 (219)
T ss_dssp EEETCHHHHHHHHHHHC
T ss_pred EEcCCcCHHHHHHHHHc
Confidence 99999999998888643
No 139
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=1.3e-07 Score=91.49 Aligned_cols=202 Identities=15% Similarity=0.098 Sum_probs=127.6
Q ss_pred CCceEEEEcCCCCchhc---HH--HH--HHHHHhCCcEEEEecCCCCCCCCCCC-------CCccCHHHHHHHHHHHHHH
Q 016141 139 ETSHFVLVHGGGFGAWC---WY--KT--MTLLKESGFKVDAVDLTGSGVSSCDT-------NSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~---~~--~~--~~~l~~~g~~v~~~d~~G~G~s~~~~-------~~~~~~~~~~~~~~~~l~~ 204 (394)
.-|+|+++-|.++-.-. |. .. ...|++.||.|+.+|-||........ -+...++|.++-+.-+.+.
T Consensus 641 kYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq 720 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQ 720 (867)
T ss_pred CCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHh
Confidence 34899999998765432 22 22 35688899999999999986553211 1345788999988888888
Q ss_pred hC---CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCC
Q 016141 205 LG---NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPP 281 (394)
Q Consensus 205 l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (394)
.| .+ +|.+-|||+||++++....++|+-++..|.-+|...... .+.
T Consensus 721 ~gfidmd-rV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~---YDT--------------------------- 769 (867)
T KOG2281|consen 721 TGFIDMD-RVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL---YDT--------------------------- 769 (867)
T ss_pred cCcccch-heeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee---ecc---------------------------
Confidence 75 45 999999999999999999999997777666555432110 000
Q ss_pred CcchhhHHHHHHHhcccC--CchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHH----
Q 016141 282 TSIDLDRTLLRDLLFNRS--AAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMI---- 355 (394)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~---- 355 (394)
.+.+.+.+.. .......... ....+++. ...-..|+|||--|.-|-..+...+.
T Consensus 770 --------gYTERYMg~P~~nE~gY~agSV-------~~~Veklp-----depnRLlLvHGliDENVHF~Hts~Lvs~lv 829 (867)
T KOG2281|consen 770 --------GYTERYMGYPDNNEHGYGAGSV-------AGHVEKLP-----DEPNRLLLVHGLIDENVHFAHTSRLVSALV 829 (867)
T ss_pred --------cchhhhcCCCccchhcccchhH-------HHHHhhCC-----CCCceEEEEecccccchhhhhHHHHHHHHH
Confidence 0000011111 0000000000 01111111 01245899999999888665544443
Q ss_pred HhCCCceEEEEcCCCccCccc-ChHHHHHHHHHHHhh
Q 016141 356 NSNPPELVFEIKGSDHAPFFS-KPRALHRILVEISKI 391 (394)
Q Consensus 356 ~~~~~~~~~~i~~agH~~~~e-~p~~v~~~i~~fl~~ 391 (394)
+..+.-++.+||+--|.+-.- .-+-+...|..|+++
T Consensus 830 kagKpyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 830 KAGKPYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred hCCCceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 444567999999999987544 456677888899875
No 140
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.69 E-value=2.5e-08 Score=93.09 Aligned_cols=109 Identities=16% Similarity=0.311 Sum_probs=64.7
Q ss_pred CCCCceEEEEcCCCCch--hcH-HHHHHHH-Hh--CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----C
Q 016141 137 SPETSHFVLVHGGGFGA--WCW-YKTMTLL-KE--SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----G 206 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~--~~~-~~~~~~l-~~--~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~ 206 (394)
+..+|++|++|||..+. ..| ..+...| .. ..++||++||...-.... ...........+.|..+|..| +
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y-~~a~~n~~~vg~~la~~l~~L~~~~g 146 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNY-PQAVANTRLVGRQLAKFLSFLINNFG 146 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-H-HHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccc-cchhhhHHHHHHHHHHHHHHHHhhcC
Confidence 46789999999998877 345 3445544 44 479999999953221100 001112233334444444433 3
Q ss_pred CC-CcEEEEEeChHHHHHHHHHHhCCc--ccceEEEeecccCC
Q 016141 207 NE-EKVILVGHDFGGACISYVMELFPS--KVAKAVFIAATMLT 246 (394)
Q Consensus 207 ~~-~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lVli~~~~~~ 246 (394)
+. ++++|||||+||.+|-.++..... +|..|+.++|+.+.
T Consensus 147 ~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 147 VPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp --GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred CChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 32 499999999999999999998877 89999999998753
No 141
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.62 E-value=4.3e-06 Score=77.08 Aligned_cols=60 Identities=13% Similarity=0.112 Sum_probs=41.3
Q ss_pred CCCcCEEEEecCCCCCCChHHHHHHHH----hC-CCceEEEEcCCCccCcc-cChHHHHHHHHHHH
Q 016141 330 YGSVPRFYIKTLQDCAIPVSVQEAMIN----SN-PPELVFEIKGSDHAPFF-SKPRALHRILVEIS 389 (394)
Q Consensus 330 ~~~~PvLii~G~~D~~vp~~~~~~l~~----~~-~~~~~~~i~~agH~~~~-e~p~~v~~~i~~fl 389 (394)
..++|++|.+|..|.++|....+.+.+ .- .+++++.+++.+|.... ..-......|.+-+
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAAFASAPDALAWLDDRF 282 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhhhcCcHHHHHHHHHHH
Confidence 347999999999999999887665554 33 46788888999998543 22233334444433
No 142
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.62 E-value=1.4e-06 Score=78.30 Aligned_cols=217 Identities=13% Similarity=0.150 Sum_probs=121.0
Q ss_pred eEEEEcCCCCc-hhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC--CcEEEEEeCh
Q 016141 142 HFVLVHGGGFG-AWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE--EKVILVGHDF 218 (394)
Q Consensus 142 ~vvl~HG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~lvGhS~ 218 (394)
++|++=||.+. .....+..+...+.|+.++.+-.+-...... ...+...++.+...+...... .++++-.+|.
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~----~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSn 76 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWP----SKRLAPAADKLLELLSDSQSASPPPILFHSFSN 76 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeee----ccchHHHHHHHHHHhhhhccCCCCCEEEEEEEC
Confidence 35666688544 4456667776666899999987553222111 135566666666666554333 2799999999
Q ss_pred HHHHHHHHHHh----C-----C-cccceEEEeecccCCCCcchHHHHHhhcCchHH-----HHHHHHHHHhcCCCCCCCc
Q 016141 219 GGACISYVMEL----F-----P-SKVAKAVFIAATMLTSGQSALDTISQQMGSNDL-----MQQAQIFLYANGKQNPPTS 283 (394)
Q Consensus 219 Gg~~a~~~a~~----~-----p-~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 283 (394)
||...+..... . + .+++++|+-+++...........+......... .........
T Consensus 77 GG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 146 (240)
T PF05705_consen 77 GGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLL---------- 146 (240)
T ss_pred chHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHH----------
Confidence 88866554331 1 1 238999988888655433333333332222100 000000000
Q ss_pred chhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC----
Q 016141 284 IDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP---- 359 (394)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~---- 359 (394)
.................... ..+ .. .......+|.|+++++.|.+++.+..++..+...
T Consensus 147 ---~~~~~~~~~~~~~~~~~~~~--~~~---------~~---~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~ 209 (240)
T PF05705_consen 147 ---RLSIISYFIFGYPDVQEYYR--RAL---------ND---FANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW 209 (240)
T ss_pred ---HHHHHHHHHhcCCcHHHHHH--HHH---------hh---hhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC
Confidence 00000000001100000000 000 00 0111124899999999999999987776665432
Q ss_pred CceEEEEcCCCccCccc-ChHHHHHHHHHHH
Q 016141 360 PELVFEIKGSDHAPFFS-KPRALHRILVEIS 389 (394)
Q Consensus 360 ~~~~~~i~~agH~~~~e-~p~~v~~~i~~fl 389 (394)
+++...++++.|..|+. +|+++.+.|.+|+
T Consensus 210 ~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 210 DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 37888899999998876 6999999999985
No 143
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.60 E-value=1.8e-07 Score=82.86 Aligned_cols=102 Identities=21% Similarity=0.128 Sum_probs=64.8
Q ss_pred ceEEEEcCCCCchhcHHHH--------HHHHHhCCcEEEEecCC-CCCCCCCCCCCccCHHHHHHHHH-HHHHHhCCC-C
Q 016141 141 SHFVLVHGGGFGAWCWYKT--------MTLLKESGFKVDAVDLT-GSGVSSCDTNSITSLEQYVKPLI-DTFNELGNE-E 209 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~--------~~~l~~~g~~v~~~d~~-G~G~s~~~~~~~~~~~~~~~~~~-~~l~~l~~~-~ 209 (394)
|.|||+||.|.....-... +....+.++-|++|.+- =+..++. ....-+....+-+. .+.++.+++ .
T Consensus 192 PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~--~t~~~l~~~idli~~vlas~ynID~s 269 (387)
T COG4099 192 PLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEE--KTLLYLIEKIDLILEVLASTYNIDRS 269 (387)
T ss_pred cEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEccccccccccccc--ccchhHHHHHHHHHHHHhhccCcccc
Confidence 8999999998877654322 12222334555555521 1111211 11122333344444 333455665 5
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
+++++|.|+||+-++.++.++|+.+++.+++++..
T Consensus 270 RIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 270 RIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred eEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 89999999999999999999999999999999754
No 144
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.55 E-value=9.7e-08 Score=83.95 Aligned_cols=51 Identities=18% Similarity=0.314 Sum_probs=37.1
Q ss_pred HHHHHHHHHHh-CCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 195 VKPLIDTFNEL-GNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 195 ~~~~~~~l~~l-~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
.+...++|... ..+ ++|.|+|.|.||-+|+.+|..+| .|+++|.+++....
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~ 58 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB-
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeE
Confidence 34444455444 222 49999999999999999999999 69999999987643
No 145
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.53 E-value=9.1e-07 Score=78.79 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=68.9
Q ss_pred CCCceEEEEcCCCCchhcHH-HHHHHHHhCCc--EEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----CCCCc
Q 016141 138 PETSHFVLVHGGGFGAWCWY-KTMTLLKESGF--KVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----GNEEK 210 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~-~~~~~l~~~g~--~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~ 210 (394)
.++..+||+||+..+...-. ..++.....|| .++.+.||+.|.-..-.....+...-...+..+|..+ +.. +
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~-~ 94 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK-R 94 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc-e
Confidence 46779999999988865532 22222222233 7999999988863221111123333444555555554 444 9
Q ss_pred EEEEEeChHHHHHHHHHHh----CC-----cccceEEEeecccC
Q 016141 211 VILVGHDFGGACISYVMEL----FP-----SKVAKAVFIAATML 245 (394)
Q Consensus 211 ~~lvGhS~Gg~~a~~~a~~----~p-----~~v~~lVli~~~~~ 245 (394)
|+|++||||+.+.+.+... .+ .++..+|+++|-..
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 9999999999999887653 21 25788889887653
No 146
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.52 E-value=3e-07 Score=85.36 Aligned_cols=106 Identities=17% Similarity=0.164 Sum_probs=62.3
Q ss_pred CCCceEEEEcCCCCchhc--------------H----HHHHHHHHhCCcEEEEecCCCCCCCCCCCC----CccCHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWC--------------W----YKTMTLLKESGFKVDAVDLTGSGVSSCDTN----SITSLEQYV 195 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~--------------~----~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----~~~~~~~~~ 195 (394)
+.-|+||++||-+++.+. + ..+...|+++||.|+++|.+|+|....... ..++.+.++
T Consensus 113 ~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la 192 (390)
T PF12715_consen 113 GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALA 192 (390)
T ss_dssp S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHH
T ss_pred CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHH
Confidence 445799999998776532 1 135678999999999999999998754321 112222222
Q ss_pred H---------------HHHHHHHHhCC-----CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 196 K---------------PLIDTFNELGN-----EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 196 ~---------------~~~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
. |....++.|.- +++|.++|+||||+.++.+|+.. ++|+..|..+...
T Consensus 193 ~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 193 RNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp HHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred HHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 1 22334455421 14999999999999999999865 5798888766543
No 147
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.49 E-value=6.2e-06 Score=71.72 Aligned_cols=104 Identities=24% Similarity=0.192 Sum_probs=75.8
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCC-----cEEEEecCCCCCCC----CC----C------CCCccCHHHHHHHHHHH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESG-----FKVDAVDLTGSGVS----SC----D------TNSITSLEQYVKPLIDT 201 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g-----~~v~~~d~~G~G~s----~~----~------~~~~~~~~~~~~~~~~~ 201 (394)
-+.||+||.+++......++..|...+ --++..|--|.=.. +. | .....+..++..++..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 378999999999999999999988763 12555665553111 11 1 01234666777888877
Q ss_pred HHHh----CCCCcEEEEEeChHHHHHHHHHHhCCc-----ccceEEEeecccC
Q 016141 202 FNEL----GNEEKVILVGHDFGGACISYVMELFPS-----KVAKAVFIAATML 245 (394)
Q Consensus 202 l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~lVli~~~~~ 245 (394)
+.+| +++ ++.+|||||||.-...++..+.. .+.++|.++++..
T Consensus 126 msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 126 MSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 7766 677 99999999999998888876543 3899999998754
No 148
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.39 E-value=1.5e-06 Score=78.43 Aligned_cols=102 Identities=19% Similarity=0.177 Sum_probs=72.2
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC-CcEEEEEeCh
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE-EKVILVGHDF 218 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvGhS~ 218 (394)
...||++-|..+--+. .++..=++.||.|+.+++||++.|.+.+-...+...+-.-+.-.|..|+.. +.++|.|||.
T Consensus 243 q~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSI 320 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSI 320 (517)
T ss_pred ceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeec
Confidence 3467777775432221 122223345899999999999999876644444444433444556777753 5899999999
Q ss_pred HHHHHHHHHHhCCcccceEEEeeccc
Q 016141 219 GGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 219 Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
||..+..+|..+|+ |+++||-++.-
T Consensus 321 GGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 321 GGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred CCchHHHHhhcCCC-ceEEEeecchh
Confidence 99999999999998 99999877653
No 149
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.35 E-value=1.4e-06 Score=82.07 Aligned_cols=103 Identities=26% Similarity=0.317 Sum_probs=83.2
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcE---EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFK---VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGH 216 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 216 (394)
.-++|++||++.+...|..+...+...|+. ++.+++++.. . ........+.+...|.+++...+.. ++.|+||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~--~~~~~~~~~ql~~~V~~~l~~~ga~-~v~LigH 134 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGD-G--TYSLAVRGEQLFAYVDEVLAKTGAK-KVNLIGH 134 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccC-C--CccccccHHHHHHHHHHHHhhcCCC-ceEEEee
Confidence 348999999988999998888888877887 8899888661 1 1223345666777777888888877 9999999
Q ss_pred ChHHHHHHHHHHhCC--cccceEEEeecccCC
Q 016141 217 DFGGACISYVMELFP--SKVAKAVFIAATMLT 246 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p--~~v~~lVli~~~~~~ 246 (394)
||||.+...++...+ .+|+.++.++++-..
T Consensus 135 S~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~G 166 (336)
T COG1075 135 SMGGLDSRYYLGVLGGANRVASVVTLGTPHHG 166 (336)
T ss_pred cccchhhHHHHhhcCccceEEEEEEeccCCCC
Confidence 999999999999888 789999999987643
No 150
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.34 E-value=0.0001 Score=70.74 Aligned_cols=80 Identities=21% Similarity=0.238 Sum_probs=59.0
Q ss_pred HHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC---CC-CcEEEEEeChHHHHHHHHHHhCCccc
Q 016141 159 TMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG---NE-EKVILVGHDFGGACISYVMELFPSKV 234 (394)
Q Consensus 159 ~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~---~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v 234 (394)
+--.|.. |+.|+.+.+.- .+....++++.......+++++. .+ .+++|||.+.||..++.+|+.+|+.+
T Consensus 93 vG~AL~~-GHPvYFV~F~p------~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~ 165 (581)
T PF11339_consen 93 VGVALRA-GHPVYFVGFFP------EPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLV 165 (581)
T ss_pred HHHHHHc-CCCeEEEEecC------CCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCcc
Confidence 3344544 88888776431 12244688888887777777652 22 28999999999999999999999999
Q ss_pred ceEEEeecccC
Q 016141 235 AKAVFIAATML 245 (394)
Q Consensus 235 ~~lVli~~~~~ 245 (394)
.-+|+-+++..
T Consensus 166 gplvlaGaPls 176 (581)
T PF11339_consen 166 GPLVLAGAPLS 176 (581)
T ss_pred CceeecCCCcc
Confidence 98888877654
No 151
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.33 E-value=6e-05 Score=73.41 Aligned_cols=108 Identities=12% Similarity=0.161 Sum_probs=71.4
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHH-------------------HHHhCCcEEEEecCC-CCCCCCCCCCC--ccCHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMT-------------------LLKESGFKVDAVDLT-GSGVSSCDTNS--ITSLEQY 194 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~-------------------~l~~~g~~v~~~d~~-G~G~s~~~~~~--~~~~~~~ 194 (394)
..+.|.||.+.|.++++..|..+.+ .+.+. .+++.+|.| |.|.|...... ..+.++.
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~PvGtGfS~~~~~~~~~~~~~~~ 115 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQPVGTGFSYGNDPSDYVWNDDQA 115 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--STTSTT-EESSGGGGS-SHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEeecCceEEeeccccccccchhhHH
Confidence 3667999999999999888744321 11222 689999955 99999755432 3578888
Q ss_pred HHHHHHHHHHh-------CCCCcEEEEEeChHHHHHHHHHHh----C------CcccceEEEeecccCC
Q 016141 195 VKPLIDTFNEL-------GNEEKVILVGHDFGGACISYVMEL----F------PSKVAKAVFIAATMLT 246 (394)
Q Consensus 195 ~~~~~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v~~lVli~~~~~~ 246 (394)
++++..+|..+ .- .+++|.|-|+||..+..+|.. . +-.++++++.++....
T Consensus 116 a~~~~~fl~~f~~~~p~~~~-~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 116 AEDLYEFLQQFFQKFPEYRS-NPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHHSGGGTT-SEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHHhhhhhhhccC-CCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 88888888764 22 389999999999977666643 2 2348899998887643
No 152
>PLN02606 palmitoyl-protein thioesterase
Probab=98.31 E-value=2.2e-05 Score=71.14 Aligned_cols=104 Identities=19% Similarity=0.225 Sum_probs=71.2
Q ss_pred CCceEEEEcCCC--CchhcHHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh-CCCCcEEEE
Q 016141 139 ETSHFVLVHGGG--FGAWCWYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL-GNEEKVILV 214 (394)
Q Consensus 139 ~~~~vvl~HG~~--~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~lv 214 (394)
...+||+.||+| .+...+..+.+.+.+. |+.+..+. .|-+. .......+.+.++.+.+.+... .+.+-+++|
T Consensus 25 ~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~---~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 25 LSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV---QDSLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc---ccccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 345899999999 5555677887777533 66555554 33222 1112245666666666555442 122479999
Q ss_pred EeChHHHHHHHHHHhCCc--ccceEEEeecccCC
Q 016141 215 GHDFGGACISYVMELFPS--KVAKAVFIAATMLT 246 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~~p~--~v~~lVli~~~~~~ 246 (394)
|+|.||.++-.++++.|+ .|+.+|.++++...
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 999999999999999987 59999999987543
No 153
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.29 E-value=7.1e-06 Score=73.24 Aligned_cols=107 Identities=20% Similarity=0.232 Sum_probs=75.4
Q ss_pred CCCceEEEEcCCCCchhcHHHHH--HHHHh-CCcEEEEecCC-------CCCCCCCCCC---CccCHHHHHHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTM--TLLKE-SGFKVDAVDLT-------GSGVSSCDTN---SITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~--~~l~~-~g~~v~~~d~~-------G~G~s~~~~~---~~~~~~~~~~~~~~~l~~ 204 (394)
.+.|.||++||.+++...+.... +.|++ .||-|+.+|-- +.+.+..+.. ...+...+.+.+..++.+
T Consensus 59 ~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~ 138 (312)
T COG3509 59 SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNE 138 (312)
T ss_pred CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHh
Confidence 34479999999999987765543 44544 59999999522 1222211211 223444455555566666
Q ss_pred hCCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 205 LGNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 205 l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
.+++ .+|++.|.|-||.++..++..+|+.+.++.++++..
T Consensus 139 ~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 139 YGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred cCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 6665 599999999999999999999999999998888766
No 154
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.25 E-value=4.6e-05 Score=65.01 Aligned_cols=102 Identities=23% Similarity=0.203 Sum_probs=77.6
Q ss_pred CceEEEEcCCCCchhc---HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC---CcEEE
Q 016141 140 TSHFVLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE---EKVIL 213 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~l 213 (394)
.-.|||+-|++..--. -..+...|.+.+|.++.+.++.+- .--+..++++.++|+..++++++.. ..|+|
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy----~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSY----NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccc----cccccccccccHHHHHHHHHHhhccCcccceEE
Confidence 3579999998877543 456778898999999999876321 1113467888999999999988643 38999
Q ss_pred EEeChHHHHHHHHHHh--CCcccceEEEeecccC
Q 016141 214 VGHDFGGACISYVMEL--FPSKVAKAVFIAATML 245 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~--~p~~v~~lVli~~~~~ 245 (394)
+|||.|+.=.+.+... .+..|...|+.+|...
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 9999999977777732 4556888888888764
No 155
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.24 E-value=4.3e-06 Score=73.77 Aligned_cols=87 Identities=15% Similarity=0.233 Sum_probs=51.1
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhC--CcEEEEecCCCCCCCCCCCCCccCHHHHHHHH----HHHHHHhCCC-CcEE
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKES--GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL----IDTFNELGNE-EKVI 212 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~--g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~----~~~l~~l~~~-~~~~ 212 (394)
...|||+||+.++...|..+...+... .+.-..+...++.... .....+++..++.+ .+.++..... .+++
T Consensus 4 ~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~--~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Is 81 (217)
T PF05057_consen 4 VHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNE--FKTFDGIDVCGERLAEEILEHIKDYESKIRKIS 81 (217)
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccc--cccchhhHHHHHHHHHHHHHhccccccccccce
Confidence 458999999999999998887777661 1221122222222111 11223455544444 3333333322 3899
Q ss_pred EEEeChHHHHHHHHHH
Q 016141 213 LVGHDFGGACISYVME 228 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~ 228 (394)
+|||||||.++-.+..
T Consensus 82 fIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 82 FIGHSLGGLIARYALG 97 (217)
T ss_pred EEEecccHHHHHHHHH
Confidence 9999999998865554
No 156
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.24 E-value=0.00024 Score=66.09 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=69.9
Q ss_pred CCceEEEEcCCCCchh---cHHHHHHHHHhCCcEEEEecCCC--CCCCCC----------------CCCC-c--------
Q 016141 139 ETSHFVLVHGGGFGAW---CWYKTMTLLKESGFKVDAVDLTG--SGVSSC----------------DTNS-I-------- 188 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~---~~~~~~~~l~~~g~~v~~~d~~G--~G~s~~----------------~~~~-~-------- 188 (394)
....||++||.+.+.. ....+-..|.++|+.++++.+|. ...... .... .
T Consensus 86 ~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 165 (310)
T PF12048_consen 86 PQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQE 165 (310)
T ss_pred CceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccH
Confidence 3469999999988864 34667778899999999998887 110000 0000 0
Q ss_pred -cCHHHHHH----HHHHHHH---HhCCCCcEEEEEeChHHHHHHHHHHhCCc-ccceEEEeecccC
Q 016141 189 -TSLEQYVK----PLIDTFN---ELGNEEKVILVGHDFGGACISYVMELFPS-KVAKAVFIAATML 245 (394)
Q Consensus 189 -~~~~~~~~----~~~~~l~---~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~lVli~~~~~ 245 (394)
...+.+.. -|.+.+. ..+.. +++||||+.|+++++.+....+. .++++|+|++...
T Consensus 166 ~~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 166 AEAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 11122222 2333333 33433 69999999999999999987764 5999999998754
No 157
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.20 E-value=1.5e-05 Score=78.08 Aligned_cols=107 Identities=21% Similarity=0.169 Sum_probs=70.6
Q ss_pred CCceEEEEcCCCCchhcH--HHHHHHHHhC-CcEEEEecCCCCCCCCCCCC------CccCHHHHHHHHHHHHHHhC---
Q 016141 139 ETSHFVLVHGGGFGAWCW--YKTMTLLKES-GFKVDAVDLTGSGVSSCDTN------SITSLEQYVKPLIDTFNELG--- 206 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~--~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~l~~l~--- 206 (394)
++|++|++-|=+.-...| ..++..|+++ |-.|+++++|-+|.|..-.. ...+.++..+|+..+++++.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 367666665544333222 2345556554 77899999999999974221 45788999999999988763
Q ss_pred ---CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 207 ---NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 207 ---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
.+.+++++|-|+||++|..+-.++|+.|.+.+.-++++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 224899999999999999999999999999999888764
No 158
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.19 E-value=1.5e-05 Score=72.81 Aligned_cols=90 Identities=22% Similarity=0.241 Sum_probs=66.4
Q ss_pred CCCceEEEEcCCCCchhcH-------HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh-----
Q 016141 138 PETSHFVLVHGGGFGAWCW-------YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----- 205 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~-------~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----- 205 (394)
.....||++-|.++.-+.. ..+.....+.|-+|+.+++||.|.|.+.. +.++++.|-.+.+++|
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~----s~~dLv~~~~a~v~yL~d~~~ 210 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP----SRKDLVKDYQACVRYLRDEEQ 210 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC----CHHHHHHHHHHHHHHHHhccc
Confidence 4567999999987776651 22333344458999999999999998665 4577777777766665
Q ss_pred CCC-CcEEEEEeChHHHHHHHHHHhCC
Q 016141 206 GNE-EKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 206 ~~~-~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
|++ +++++.|||+||.++..++.++.
T Consensus 211 G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 211 GPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCChheEEEeeccccHHHHHHHHHhcc
Confidence 221 48999999999999988776553
No 159
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.13 E-value=5e-05 Score=73.68 Aligned_cols=160 Identities=15% Similarity=0.093 Sum_probs=99.3
Q ss_pred CCceEEEEcCCC--CchhcH-HHHHHHHHhCC--cEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH--------h
Q 016141 139 ETSHFVLVHGGG--FGAWCW-YKTMTLLKESG--FKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE--------L 205 (394)
Q Consensus 139 ~~~~vvl~HG~~--~~~~~~-~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~--------l 205 (394)
..|.+|++||.+ .....| ..+-..|...| ..|..||++.-- ....+...++.+..+... +
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~i-------gG~nI~h~ae~~vSf~r~kvlei~gef 247 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPI-------GGANIKHAAEYSVSFDRYKVLEITGEF 247 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCC-------CCcchHHHHHHHHHHhhhhhhhhhccC
Confidence 457899999987 111222 22223333322 456677765211 114555555555555542 1
Q ss_pred CCCCcEEEEEeChHHHHHHHHHHhCC-cccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCcc
Q 016141 206 GNEEKVILVGHDFGGACISYVMELFP-SKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTSI 284 (394)
Q Consensus 206 ~~~~~~~lvGhS~Gg~~a~~~a~~~p-~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (394)
.. .+|+|+|.|||+.++.+.....- ..|+++|.++-+....... ....
T Consensus 248 ph-a~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp------------------------------rgir 296 (784)
T KOG3253|consen 248 PH-APIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP------------------------------RGIR 296 (784)
T ss_pred CC-CceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCcc------------------------------cCCc
Confidence 22 48999999999888877765433 2488888887554321000 0000
Q ss_pred hhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhCC-CceE
Q 016141 285 DLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSNP-PELV 363 (394)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~~-~~~~ 363 (394)
+ ..+-. .+.|+|||.|.+|..++++..+.+++.+. ..++
T Consensus 297 --D------------------------------E~Lld--------mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~el 336 (784)
T KOG3253|consen 297 --D------------------------------EALLD--------MKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVEL 336 (784)
T ss_pred --c------------------------------hhhHh--------cCCceEEEecCCcccCCHHHHHHHHHHhhccceE
Confidence 0 00001 15999999999999999999999988875 5789
Q ss_pred EEEcCCCccCccc
Q 016141 364 FEIKGSDHAPFFS 376 (394)
Q Consensus 364 ~~i~~agH~~~~e 376 (394)
+++.+++|.+-..
T Consensus 337 hVI~~adhsmaip 349 (784)
T KOG3253|consen 337 HVIGGADHSMAIP 349 (784)
T ss_pred EEecCCCccccCC
Confidence 9999999986654
No 160
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.12 E-value=0.00026 Score=66.47 Aligned_cols=105 Identities=20% Similarity=0.264 Sum_probs=71.1
Q ss_pred CCceEEEEcCCCCchhcHHHH-------HHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 139 ETSHFVLVHGGGFGAWCWYKT-------MTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~-------~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
..|+||++||+|..-...... ...|. ...+++.|+--...-........-+.+.++-...+++..|.+ +|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~--~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~-nI 197 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP--EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNK-NI 197 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC--CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCC-eE
Confidence 469999999987766543222 22333 358888887644311111223355677777777777777876 99
Q ss_pred EEEEeChHHHHHHHHHHhC--Cc---ccceEEEeecccCC
Q 016141 212 ILVGHDFGGACISYVMELF--PS---KVAKAVFIAATMLT 246 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~~--p~---~v~~lVli~~~~~~ 246 (394)
+|+|-|.||.+++.+.+.. ++ .-+++|+++|....
T Consensus 198 ~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 198 ILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 9999999999998877632 11 25799999998754
No 161
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.10 E-value=4.2e-05 Score=75.01 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=83.7
Q ss_pred CCceeecCCCccCC-CCCceEEEEcCCCCchh---cH--HHHHH---HHHhCCcEEEEecCCCCCCCCCCCCCccC-HHH
Q 016141 124 RPHQLVNQEPKIES-PETSHFVLVHGGGFGAW---CW--YKTMT---LLKESGFKVDAVDLTGSGVSSCDTNSITS-LEQ 193 (394)
Q Consensus 124 ~~~~~~~~~~~~~~-~~~~~vvl~HG~~~~~~---~~--~~~~~---~l~~~g~~v~~~d~~G~G~s~~~~~~~~~-~~~ 193 (394)
+|..+.++-+.... +..|+++..+-++-... .+ ....+ .++.+||.|+..|.||.|.|.+......+ -.+
T Consensus 28 DGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~SeG~~~~~~~~E~~ 107 (563)
T COG2936 28 DGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSEGVFDPESSREAE 107 (563)
T ss_pred CCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCCcccceecccccc
Confidence 67777665544433 45577777783333333 11 22233 57788999999999999999987654444 222
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 194 YVKPLIDTFNELGN-EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 194 ~~~~~~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
..-|+.++|.+... +.+|..+|.|++|+..+.+|+..|..++.++...+...
T Consensus 108 Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 108 DGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred chhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 33356666655432 25999999999999999999988888998888777654
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.09 E-value=1.3e-05 Score=72.40 Aligned_cols=109 Identities=12% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCCceEEEEcCCCCchhcH--HHHHHHHHhCC----cEEEEecCCCCCCCC--C-----------CCCCccCH-HHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCW--YKTMTLLKESG----FKVDAVDLTGSGVSS--C-----------DTNSITSL-EQYVKP 197 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~--~~~~~~l~~~g----~~v~~~d~~G~G~s~--~-----------~~~~~~~~-~~~~~~ 197 (394)
..-|+|+++||.......+ ...+..+...| .-+++++.-+.+... . .......+ +-+.++
T Consensus 22 ~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e 101 (251)
T PF00756_consen 22 KPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGGDAYETFLTEE 101 (251)
T ss_dssp TTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTHHHHHHHHHTH
T ss_pred CCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCCcccceehhcc
Confidence 4448999999972222222 22333333332 445666665554111 0 00011122 334456
Q ss_pred HHHHHHHh-CCCC-cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 198 LIDTFNEL-GNEE-KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 198 ~~~~l~~l-~~~~-~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
|..+|+.. .... +..|+|+||||+.|+.++.++|+.+.+++.+++....
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 67666553 3321 3799999999999999999999999999999987543
No 163
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.02 E-value=4.4e-05 Score=70.19 Aligned_cols=227 Identities=18% Similarity=0.177 Sum_probs=117.7
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCC---------ccC--------HHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNS---------ITS--------LEQYVKPLID 200 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~---------~~~--------~~~~~~~~~~ 200 (394)
..-|.|++.||++.....-......++..++.++..+...+|.+...... ... ......+...
T Consensus 47 ~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred ccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 34578999999999988866677788888888888875333333211100 000 0001111111
Q ss_pred HHHHhCCCCcEEEEEeChHHHHHHHHHHhCCc--ccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCC
Q 016141 201 TFNELGNEEKVILVGHDFGGACISYVMELFPS--KVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQ 278 (394)
Q Consensus 201 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (394)
..... ++....|+++|+..+..++...+. ....++.++........ ...... ...........+......
T Consensus 127 ~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~ 198 (299)
T COG1073 127 LGASL---GPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALA--LLLLGA---NPELARELIDYLITPGGF 198 (299)
T ss_pred Hhhhc---CcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceee--cccccc---chHHHHhhhhhhccCCCC
Confidence 11111 388999999999999998887763 23334444433221100 000000 000011111111111000
Q ss_pred CCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC
Q 016141 279 NPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN 358 (394)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~ 358 (394)
...... ......... . ...+...+.......+. .+|+|+++|.+|..+|......+....
T Consensus 199 ~~~~~~--------~~~~~~~~~----~-~~~~~~~d~~~~~~~i~-------~~P~l~~~G~~D~~vp~~~~~~~~~~~ 258 (299)
T COG1073 199 APLPAP--------EAPLDTLPL----R-AVLLLLLDPFDDAEKIS-------PRPVLLVHGERDEVVPLRDAEDLYEAA 258 (299)
T ss_pred CCCCcc--------ccccccccc----c-hhhhccCcchhhHhhcC-------CcceEEEecCCCcccchhhhHHHHhhh
Confidence 000000 000000000 0 00011111122222221 279999999999999999988887776
Q ss_pred CC--ceEEEEcCCCccCcccChH---HHHHHHHHHHhhh
Q 016141 359 PP--ELVFEIKGSDHAPFFSKPR---ALHRILVEISKIT 392 (394)
Q Consensus 359 ~~--~~~~~i~~agH~~~~e~p~---~v~~~i~~fl~~~ 392 (394)
.. .+...+++++|........ +..+.+.+|+.++
T Consensus 259 ~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 259 RERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred ccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 55 5788889999998875443 6788888888765
No 164
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=7.5e-05 Score=65.36 Aligned_cols=242 Identities=15% Similarity=0.109 Sum_probs=123.1
Q ss_pred cCCCCCceEEEEcCCCCchhcHH-HHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHH--------HHHHH--
Q 016141 135 IESPETSHFVLVHGGGFGAWCWY-KTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL--------IDTFN-- 203 (394)
Q Consensus 135 ~~~~~~~~vvl~HG~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~--------~~~l~-- 203 (394)
++.+.++.-|.+-|-|.+...-. .+...+.++|...++++-|-+|....+......++.. .|+ .++..
T Consensus 108 iPQK~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~v-tDlf~mG~A~I~E~~~lf 186 (371)
T KOG1551|consen 108 IPQKMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYV-TDLFKMGRATIQEFVKLF 186 (371)
T ss_pred cccCcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHH-HHHHHhhHHHHHHHHHhc
Confidence 34455566666666555443322 3445667778999999999999876443222222222 222 12221
Q ss_pred ----HhCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCC
Q 016141 204 ----ELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQN 279 (394)
Q Consensus 204 ----~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (394)
..|.+ ++.|+|-||||.+|......++..|.-+=++++..... +....+... ....+.+......+......
T Consensus 187 ~Ws~~~g~g-~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asv--s~teg~l~~-~~s~~~~~~~~t~~~~~~~r 262 (371)
T KOG1551|consen 187 TWSSADGLG-NLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASV--SATEGLLLQ-DTSKMKRFNQTTNKSGYTSR 262 (371)
T ss_pred ccccccCcc-cceeeeeecccHHHHhhcccCCCCccccccccccccch--hhhhhhhhh-hhHHHHhhccCcchhhhhhh
Confidence 23566 99999999999999999998887776665555432111 000000000 00000000000000000000
Q ss_pred CCCcchhhHHHHHHHhcccCCchhHHHH-HHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC
Q 016141 280 PPTSIDLDRTLLRDLLFNRSAAKDVELA-LISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN 358 (394)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~ 358 (394)
.+ ...+.... +.. ......+.... ..-+.. ...++..... ...-=+.++.+++|..+|......+.+..
T Consensus 263 ~p-~Q~~~~~~-~~~--srn~~~E~~~~Mr~vmd~---~T~v~~fp~P---vdpsl~ivv~A~~D~Yipr~gv~~lQ~~W 332 (371)
T KOG1551|consen 263 NP-AQSYHLLS-KEQ--SRNSRKESLIFMRGVMDE---CTHVANFPVP---VDPSLIIVVQAKEDAYIPRTGVRSLQEIW 332 (371)
T ss_pred Cc-hhhHHHHH-HHh--hhcchHHHHHHHHHHHHh---hchhhcCCCC---CCCCeEEEEEecCCccccccCcHHHHHhC
Confidence 00 00000000 000 00011111100 000100 0011111100 00122577888999999998889999999
Q ss_pred CCceEEEEcCCCcc-CcccChHHHHHHHHHHHhhh
Q 016141 359 PPELVFEIKGSDHA-PFFSKPRALHRILVEISKIT 392 (394)
Q Consensus 359 ~~~~~~~i~~agH~-~~~e~p~~v~~~i~~fl~~~ 392 (394)
|++++..++ +||. .++-+-+.+.+.|.+-|++.
T Consensus 333 Pg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 333 PGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred CCCEEEEee-cCceeeeehhchHHHHHHHHHHHhh
Confidence 999999999 5996 45667789999999888754
No 165
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.95 E-value=0.00027 Score=61.32 Aligned_cols=82 Identities=16% Similarity=0.220 Sum_probs=55.6
Q ss_pred CCceEEEEcCCCCchhcHHHHHHHHHhCCcEE-EEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTMTLLKESGFKV-DAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD 217 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v-~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS 217 (394)
+...|||..|||.+...+..+. +. .++.| +++|++..-. +. + + .+.+ .+.|||+|
T Consensus 10 ~~~LilfF~GWg~d~~~f~hL~--~~-~~~D~l~~yDYr~l~~---------d~-----~----~--~~y~-~i~lvAWS 65 (213)
T PF04301_consen 10 GKELILFFAGWGMDPSPFSHLI--LP-ENYDVLICYDYRDLDF---------DF-----D----L--SGYR-EIYLVAWS 65 (213)
T ss_pred CCeEEEEEecCCCChHHhhhcc--CC-CCccEEEEecCccccc---------cc-----c----c--ccCc-eEEEEEEe
Confidence 3569999999999999887653 12 23554 5677763221 10 1 1 1234 99999999
Q ss_pred hHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 218 FGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 218 ~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
||-.+|..+.... .+...|.+++...+
T Consensus 66 mGVw~A~~~l~~~--~~~~aiAINGT~~P 92 (213)
T PF04301_consen 66 MGVWAANRVLQGI--PFKRAIAINGTPYP 92 (213)
T ss_pred HHHHHHHHHhccC--CcceeEEEECCCCC
Confidence 9999998877654 37777888876644
No 166
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.94 E-value=7.8e-05 Score=63.15 Aligned_cols=107 Identities=20% Similarity=0.137 Sum_probs=71.2
Q ss_pred CCceEEEEcCCCCchhcHH---HHHHHHHhCCcEEEEecC--CCCC---CCCC-CC---------------CCccCH-HH
Q 016141 139 ETSHFVLVHGGGFGAWCWY---KTMTLLKESGFKVDAVDL--TGSG---VSSC-DT---------------NSITSL-EQ 193 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~---~~~~~l~~~g~~v~~~d~--~G~G---~s~~-~~---------------~~~~~~-~~ 193 (394)
.-|++.++.|+..+.+.|- .+...-.++|+.|+++|- ||.. .++. +. ...+.+ +-
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 3589999999999888763 234455678999999995 4442 1110 00 001222 22
Q ss_pred HHHHHHHHHHHh----CCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 194 YVKPLIDTFNEL----GNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 194 ~~~~~~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
.++.+-++++.- ... ++.|.||||||+=|+..+.+.|.+.+++-..+|...+
T Consensus 123 v~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 334555555432 233 7999999999999999999999998888877776543
No 167
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.92 E-value=4.3e-05 Score=58.79 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=54.7
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
..|+|+|.++.|.++|.+.++.+++.+++++++++++.||..+...-.-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 489999999999999999999999999999999999999999875556788999999864
No 168
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.90 E-value=0.00011 Score=71.01 Aligned_cols=107 Identities=13% Similarity=0.167 Sum_probs=65.8
Q ss_pred CCCceEEEEcCCCCchh-cHHHHHHHHHhCC----cEEEEecCCCCC-CCCCCCCCccCHHHHHHHHHHHHHHh-CC---
Q 016141 138 PETSHFVLVHGGGFGAW-CWYKTMTLLKESG----FKVDAVDLTGSG-VSSCDTNSITSLEQYVKPLIDTFNEL-GN--- 207 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~-~~~~~~~~l~~~g----~~v~~~d~~G~G-~s~~~~~~~~~~~~~~~~~~~~l~~l-~~--- 207 (394)
..-|+|+|+||...... .....+..|...| .-|+.+|..+.. ++........-.+.++++|.-++++. ..
T Consensus 207 ~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d 286 (411)
T PRK10439 207 EERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELLPQVRAIAPFSDD 286 (411)
T ss_pred CCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 34589999999532211 1233445555555 335677753211 11101101111233445666666654 21
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 208 EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 208 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
.++.+|+|+||||..|+.++.++|+.+.+++.+++..
T Consensus 287 ~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 287 ADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred ccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 2378999999999999999999999999999999864
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.90 E-value=0.0001 Score=67.85 Aligned_cols=106 Identities=17% Similarity=0.182 Sum_probs=67.8
Q ss_pred CCCceEEEEcCCCCchhc-HHHHHHHHHhCC--cEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----CCCCc
Q 016141 138 PETSHFVLVHGGGFGAWC-WYKTMTLLKESG--FKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----GNEEK 210 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~-~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~ 210 (394)
..+..+||+||++.+-.. -...++.....| ...+.+-||..|.--.-.....+...-..+++.+|..| ..+ +
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~-~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVK-R 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCc-e
Confidence 456799999999776544 345555555544 45788899977754221111222333334455555544 455 9
Q ss_pred EEEEEeChHHHHHHHHHHh--------CCcccceEEEeeccc
Q 016141 211 VILVGHDFGGACISYVMEL--------FPSKVAKAVFIAATM 244 (394)
Q Consensus 211 ~~lvGhS~Gg~~a~~~a~~--------~p~~v~~lVli~~~~ 244 (394)
|+|++||||.++++....+ .+.+++-+||-+|-.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 9999999999999887764 234577777776654
No 170
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.81 E-value=5e-05 Score=75.79 Aligned_cols=108 Identities=19% Similarity=0.212 Sum_probs=65.7
Q ss_pred CCCceEEEEcCCCCchhcHH-HHHHHHHhC--CcEEEEecCC----CCCCCCCC-CCCccCHHHH---HHHHHHHHHHhC
Q 016141 138 PETSHFVLVHGGGFGAWCWY-KTMTLLKES--GFKVDAVDLT----GSGVSSCD-TNSITSLEQY---VKPLIDTFNELG 206 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~-~~~~~l~~~--g~~v~~~d~~----G~G~s~~~-~~~~~~~~~~---~~~~~~~l~~l~ 206 (394)
...|+||++||.+.....-. .....|+.. |+.|+.+++| |+..+... ......+.|. .++|.+-++.+|
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fg 172 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFG 172 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhC
Confidence 45699999999643322100 022344433 3899999999 33332211 1112233343 344555555654
Q ss_pred CC-CcEEEEEeChHHHHHHHHHHh--CCcccceEEEeecccC
Q 016141 207 NE-EKVILVGHDFGGACISYVMEL--FPSKVAKAVFIAATML 245 (394)
Q Consensus 207 ~~-~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lVli~~~~~ 245 (394)
.+ ++|.|+|+|.||..+..++.. .+..+.++|++++...
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 32 599999999999988887764 2346889999887654
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.81 E-value=0.00011 Score=70.65 Aligned_cols=85 Identities=22% Similarity=0.381 Sum_probs=62.1
Q ss_pred cHHHHHHHHHhCCcEE-----EE-ecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcEEEEEeChHHHHHHH
Q 016141 155 CWYKTMTLLKESGFKV-----DA-VDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKVILVGHDFGGACISY 225 (394)
Q Consensus 155 ~~~~~~~~l~~~g~~v-----~~-~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvGhS~Gg~~a~~ 225 (394)
.|..+++.|.+.||.. .+ +|+|-.- ...+++...+...|+.. + ..+|+||||||||.++..
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~---------~~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~ 135 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSP---------AERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARY 135 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhch---------hhHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHH
Confidence 8999999999988752 23 6877211 13445566666666544 3 359999999999999999
Q ss_pred HHHhCCc------ccceEEEeecccCCCCc
Q 016141 226 VMELFPS------KVAKAVFIAATMLTSGQ 249 (394)
Q Consensus 226 ~a~~~p~------~v~~lVli~~~~~~~~~ 249 (394)
+....+. .|+++|.++++......
T Consensus 136 fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 136 FLQWMPQEEWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred HHHhccchhhHHhhhhEEEEeCCCCCCChH
Confidence 9987743 49999999998765443
No 172
>PLN02209 serine carboxypeptidase
Probab=97.77 E-value=0.002 Score=62.70 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=47.8
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhC------------------------CC-ceEEEEcCCCccCcccChHHHHHHHH
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSN------------------------PP-ELVFEIKGSDHAPFFSKPRALHRILV 386 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~------------------------~~-~~~~~i~~agH~~~~e~p~~v~~~i~ 386 (394)
.+++|+..|+.|.+++.-..+.+.+.+ .+ .+++++.+|||.+. .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 489999999999999876665555443 22 46677889999996 69999999999
Q ss_pred HHHhhh
Q 016141 387 EISKIT 392 (394)
Q Consensus 387 ~fl~~~ 392 (394)
.|+...
T Consensus 430 ~fi~~~ 435 (437)
T PLN02209 430 RWISGQ 435 (437)
T ss_pred HHHcCC
Confidence 999653
No 173
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.68 E-value=0.0071 Score=58.90 Aligned_cols=60 Identities=17% Similarity=0.123 Sum_probs=47.7
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhC------------------------CC-ceEEEEcCCCccCcccChHHHHHHHH
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSN------------------------PP-ELVFEIKGSDHAPFFSKPRALHRILV 386 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~------------------------~~-~~~~~i~~agH~~~~e~p~~v~~~i~ 386 (394)
.++||+..|+.|.+++.-..+.+.+.+ .+ .+++++.+|||.+. .+|+...+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 589999999999999877666555433 12 45677889999996 59999999999
Q ss_pred HHHhhh
Q 016141 387 EISKIT 392 (394)
Q Consensus 387 ~fl~~~ 392 (394)
.|+...
T Consensus 426 ~Fi~~~ 431 (433)
T PLN03016 426 RWISGQ 431 (433)
T ss_pred HHHcCC
Confidence 999753
No 174
>COG3150 Predicted esterase [General function prediction only]
Probab=97.61 E-value=0.0003 Score=57.48 Aligned_cols=90 Identities=20% Similarity=0.277 Sum_probs=64.9
Q ss_pred EEEEcCCCCchhcHHHHH--HHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 143 FVLVHGGGFGAWCWYKTM--TLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~~~--~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
||++|||.++........ +.+... .|-.+.+... ...++...++.+..++..++.. ...|+|.|+||
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~--------~~~i~y~~p~--l~h~p~~a~~ele~~i~~~~~~-~p~ivGssLGG 70 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED--------VRDIEYSTPH--LPHDPQQALKELEKAVQELGDE-SPLIVGSSLGG 70 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc--------ccceeeecCC--CCCCHHHHHHHHHHHHHHcCCC-CceEEeecchH
Confidence 899999999998886543 344443 2222222211 2367899999999999999876 79999999999
Q ss_pred HHHHHHHHhCCcccceEEEeecccCC
Q 016141 221 ACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 221 ~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
+.|..++.++. ++ .|+++|...+
T Consensus 71 Y~At~l~~~~G--ir-av~~NPav~P 93 (191)
T COG3150 71 YYATWLGFLCG--IR-AVVFNPAVRP 93 (191)
T ss_pred HHHHHHHHHhC--Ch-hhhcCCCcCc
Confidence 99999999874 33 3556776543
No 175
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.58 E-value=0.00078 Score=61.29 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=71.8
Q ss_pred CCCceEEEEcCCCCchhc--HHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh-CCCCcEEE
Q 016141 138 PETSHFVLVHGGGFGAWC--WYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL-GNEEKVIL 213 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~l 213 (394)
....+||+.||+|.+... ...+.+.+.+. |..+.++.. |-+ ........+.+.++.+.+.+... .+.+-+++
T Consensus 23 ~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~---~~~s~~~~~~~Qve~vce~l~~~~~l~~G~na 98 (314)
T PLN02633 23 SVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG---VGDSWLMPLTQQAEIACEKVKQMKELSQGYNI 98 (314)
T ss_pred cCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC---ccccceeCHHHHHHHHHHHHhhchhhhCcEEE
Confidence 344689999999887654 44555555442 666766654 333 12223456677777666655442 12247999
Q ss_pred EEeChHHHHHHHHHHhCCc--ccceEEEeecccC
Q 016141 214 VGHDFGGACISYVMELFPS--KVAKAVFIAATML 245 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~--~v~~lVli~~~~~ 245 (394)
||+|.||.++-.++++.|+ .|..+|.++++..
T Consensus 99 IGfSQGGlflRa~ierc~~~p~V~nlISlggph~ 132 (314)
T PLN02633 99 VGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHA 132 (314)
T ss_pred EEEccchHHHHHHHHHCCCCCCcceEEEecCCCC
Confidence 9999999999999999987 5999999998753
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.57 E-value=0.0005 Score=68.93 Aligned_cols=106 Identities=17% Similarity=0.185 Sum_probs=66.7
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHh----------------CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKE----------------SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDT 201 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~----------------~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 201 (394)
.++-+|+|++|..++...-+.++..... ..|+.++.|+-+- ...-...++.+.++-+.+.
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe----~tAm~G~~l~dQtEYV~dA 162 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE----FTAMHGHILLDQTEYVNDA 162 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch----hhhhccHhHHHHHHHHHHH
Confidence 4567999999999988877666544331 1355566665320 0001234566666666555
Q ss_pred HHHh-----C-------CCCcEEEEEeChHHHHHHHHHHh---CCcccceEEEeecccCCC
Q 016141 202 FNEL-----G-------NEEKVILVGHDFGGACISYVMEL---FPSKVAKAVFIAATMLTS 247 (394)
Q Consensus 202 l~~l-----~-------~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~lVli~~~~~~~ 247 (394)
|+.. + .+..|+||||||||.+|...+.. .++.|.-+|.++++...+
T Consensus 163 Ik~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~ 223 (973)
T KOG3724|consen 163 IKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAP 223 (973)
T ss_pred HHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCC
Confidence 5442 1 12369999999999999877752 234577777777766543
No 177
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.56 E-value=0.00012 Score=65.77 Aligned_cols=105 Identities=14% Similarity=0.210 Sum_probs=58.4
Q ss_pred CceEEEEcCCCCch---hcHHHHHHHHHhC--CcEEEEecCCCCCCC-CCCCCCccCHHHHHHHHHHHHHHhC-CCCcEE
Q 016141 140 TSHFVLVHGGGFGA---WCWYKTMTLLKES--GFKVDAVDLTGSGVS-SCDTNSITSLEQYVKPLIDTFNELG-NEEKVI 212 (394)
Q Consensus 140 ~~~vvl~HG~~~~~---~~~~~~~~~l~~~--g~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~ 212 (394)
..+||+.||+|.+. ..+..+...+.+. |-.|..++. |-+.+ +........+.+.++.+.+.+.... +.+-++
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~ 83 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFN 83 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EE
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhccee
Confidence 45899999998764 3455555544442 677888876 22211 1111112345666666666665421 224799
Q ss_pred EEEeChHHHHHHHHHHhCCc-ccceEEEeecccC
Q 016141 213 LVGHDFGGACISYVMELFPS-KVAKAVFIAATML 245 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~-~v~~lVli~~~~~ 245 (394)
+||+|.||.++-.++.+.|+ .|..+|.++++..
T Consensus 84 ~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 84 AIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp EEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 99999999999999999875 5999999998753
No 178
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.54 E-value=0.0013 Score=62.13 Aligned_cols=158 Identities=11% Similarity=0.130 Sum_probs=93.3
Q ss_pred HHHHHHHHh---CCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHH
Q 016141 197 PLIDTFNEL---GNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLY 273 (394)
Q Consensus 197 ~~~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (394)
.+.+++.+. .++ ++++.|.|==|..+...|+ ...||.++|-+.-............+...
T Consensus 158 ~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~~~l~h~y~~y--------------- 220 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMKANLEHQYRSY--------------- 220 (367)
T ss_pred HHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcHHHHHHHHHHh---------------
Confidence 344455444 566 9999999999999998888 66789888766554322111111111111
Q ss_pred hcCCCCCCCcchhhHHHHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHH
Q 016141 274 ANGKQNPPTSIDLDRTLLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEA 353 (394)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~ 353 (394)
+..-+....+ ....-+.................+..+. +++ ++|.++|.|..|.+..++....
T Consensus 221 --G~~ws~a~~d----Y~~~gi~~~l~tp~f~~L~~ivDP~~Y~---~rL--------~~PK~ii~atgDeFf~pD~~~~ 283 (367)
T PF10142_consen 221 --GGNWSFAFQD----YYNEGITQQLDTPEFDKLMQIVDPYSYR---DRL--------TMPKYIINATGDEFFVPDSSNF 283 (367)
T ss_pred --CCCCccchhh----hhHhCchhhcCCHHHHHHHHhcCHHHHH---Hhc--------CccEEEEecCCCceeccCchHH
Confidence 1000111111 1111111111222222222222222222 333 4999999999999999999999
Q ss_pred HHHhCCC-ceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 354 MINSNPP-ELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 354 l~~~~~~-~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
+...+|+ ..+..+|+++|.... ..+.+.|..|+..
T Consensus 284 y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 284 YYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred HHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 9999987 568889999999876 5566777777654
No 179
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.52 E-value=0.00022 Score=68.46 Aligned_cols=107 Identities=25% Similarity=0.296 Sum_probs=68.7
Q ss_pred CCCceEEEEcCCCCc---hhcHHHHHHHHHhCC-cEEEEecCC----CCCC-CCCC--C--CCccCHHHHH---HHHHHH
Q 016141 138 PETSHFVLVHGGGFG---AWCWYKTMTLLKESG-FKVDAVDLT----GSGV-SSCD--T--NSITSLEQYV---KPLIDT 201 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~---~~~~~~~~~~l~~~g-~~v~~~d~~----G~G~-s~~~--~--~~~~~~~~~~---~~~~~~ 201 (394)
...|++|+|||.+.. ......--..|+++| +-|+.+++| |+=. +... . .....+.|++ +++.+-
T Consensus 92 ~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~N 171 (491)
T COG2272 92 EKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDN 171 (491)
T ss_pred CCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHH
Confidence 345999999997433 222222235688887 889999988 2211 1111 0 0113444444 466677
Q ss_pred HHHhCC-CCcEEEEEeChHHHHHHHHHHhCCc---ccceEEEeecccC
Q 016141 202 FNELGN-EEKVILVGHDFGGACISYVMELFPS---KVAKAVFIAATML 245 (394)
Q Consensus 202 l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lVli~~~~~ 245 (394)
|+++|- .++|.|+|+|.||+.++.+.+ .|+ .+.++|+.++...
T Consensus 172 Ie~FGGDp~NVTl~GeSAGa~si~~Lla-~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 172 IEAFGGDPQNVTLFGESAGAASILTLLA-VPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHhCCCccceEEeeccchHHHHHHhhc-CccchHHHHHHHHhCCCCC
Confidence 777753 359999999999998887776 454 4788888888764
No 180
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.48 E-value=0.0012 Score=58.21 Aligned_cols=101 Identities=18% Similarity=0.254 Sum_probs=72.0
Q ss_pred ceEEEEcCCCCchhc--HHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhC-CCCcEEEEEe
Q 016141 141 SHFVLVHGGGFGAWC--WYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELG-NEEKVILVGH 216 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~--~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~lvGh 216 (394)
-++|++||++.+... ...+.+.+.+. |..|++.|. |-|- .......+.+.++.+.+.+.... +..-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~---~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGI---KDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCc---chhhhccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 589999999998877 67777777765 888999985 4441 11123345566665555554321 2247999999
Q ss_pred ChHHHHHHHHHHhCCc-ccceEEEeecccC
Q 016141 217 DFGGACISYVMELFPS-KVAKAVFIAATML 245 (394)
Q Consensus 217 S~Gg~~a~~~a~~~p~-~v~~lVli~~~~~ 245 (394)
|.||.++-.++...++ .|...|.++++..
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gPha 129 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGPHA 129 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCCcC
Confidence 9999999999987655 5889999888653
No 181
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0039 Score=61.86 Aligned_cols=108 Identities=13% Similarity=0.158 Sum_probs=75.9
Q ss_pred CCCceEEEEcCCCCchh--cHHHHHHHHHhCCcEEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHHh-CC
Q 016141 138 PETSHFVLVHGGGFGAW--CWYKTMTLLKESGFKVDAVDLTGSGVSSCD-------TNSITSLEQYVKPLIDTFNEL-GN 207 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~l~~l-~~ 207 (394)
+.+|.+|..-|.-+... .|....-.|.++||-.....-||=|.-... .....++.|+++-...+++.- +-
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~ 525 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTS 525 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCC
Confidence 55677887777644332 244444457788987777777887654321 124567888877666665442 22
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 208 EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 208 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
.+.++++|-|.||+++...+...|+.++++|+--|.+.
T Consensus 526 ~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 526 PDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred ccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 24899999999999999999999999999999888764
No 182
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.40 E-value=0.00099 Score=62.25 Aligned_cols=104 Identities=16% Similarity=0.089 Sum_probs=76.6
Q ss_pred ceEEEEcCCCCchhcHHH---HHHHHHh-CCcEEEEecCCCCCCCCCCCC---------CccCHHHHHHHHHHHHHHhCC
Q 016141 141 SHFVLVHGGGFGAWCWYK---TMTLLKE-SGFKVDAVDLTGSGVSSCDTN---------SITSLEQYVKPLIDTFNELGN 207 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~---~~~~l~~-~g~~v~~~d~~G~G~s~~~~~---------~~~~~~~~~~~~~~~l~~l~~ 207 (394)
.+|+|.-|.-++.+.|.. ++-.++. .+--++..++|-+|+|..--. ...+.++..+|...+|..++-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 578888898887776643 3333332 356788899999999863211 335667777777777777642
Q ss_pred -----CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 208 -----EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 208 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
..+|+.+|-|+||++|..+=.+||+.|.|.+.-++++
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPV 202 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCce
Confidence 1489999999999999999999999998887777654
No 183
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.40 E-value=0.055 Score=48.56 Aligned_cols=103 Identities=13% Similarity=0.056 Sum_probs=72.1
Q ss_pred CceEEEEcCCCCc-hhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh
Q 016141 140 TSHFVLVHGGGFG-AWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF 218 (394)
Q Consensus 140 ~~~vvl~HG~~~~-~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~ 218 (394)
.|.|+++-.+.++ +...+...+.|... ..|+.-||-.--.-.- ..+.++++|+++-+.+.+..+|.+ +++++.+.
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~-~~vyitDW~dAr~Vp~-~~G~FdldDYIdyvie~~~~~Gp~--~hv~aVCQ 178 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPY-HDVYITDWVDARMVPL-EAGHFDLDDYIDYVIEMINFLGPD--AHVMAVCQ 178 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccc-cceeEeeccccceeec-ccCCccHHHHHHHHHHHHHHhCCC--CcEEEEec
Confidence 3567777666444 44567777777765 7899989864332221 225689999999999999999964 67777766
Q ss_pred HHH-----HHHHHHHhCCcccceEEEeecccCC
Q 016141 219 GGA-----CISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 219 Gg~-----~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
-+. +++..+...|..-..+++++++...
T Consensus 179 P~vPvLAAisLM~~~~~p~~PssMtlmGgPIDa 211 (415)
T COG4553 179 PTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDA 211 (415)
T ss_pred CCchHHHHHHHHHhcCCCCCCceeeeecCcccc
Confidence 544 4444445577778999999998754
No 184
>COG0627 Predicted esterase [General function prediction only]
Probab=97.39 E-value=0.00059 Score=63.26 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=71.0
Q ss_pred CCCceEEEEcCCCCchhcH---HHHHHHHHhCCcEEEEecCC--------------CCCCCCCCC------C-CccCHHH
Q 016141 138 PETSHFVLVHGGGFGAWCW---YKTMTLLKESGFKVDAVDLT--------------GSGVSSCDT------N-SITSLEQ 193 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~---~~~~~~l~~~g~~v~~~d~~--------------G~G~s~~~~------~-~~~~~~~ 193 (394)
..-|+++++||..++...| ..+-....+.|+.++++|-. |-+.|-... . ..+.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 4457889999988775443 33444555667888876322 333221110 0 1245555
Q ss_pred HH-HHHHHHHH-HhCCCC---cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCCC
Q 016141 194 YV-KPLIDTFN-ELGNEE---KVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLTS 247 (394)
Q Consensus 194 ~~-~~~~~~l~-~l~~~~---~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~~ 247 (394)
+. +++-..++ +..... +..++||||||+-|+.+|+++|+++..+..+++...+.
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 44 34443443 333221 68999999999999999999999999999999887654
No 185
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.37 E-value=0.022 Score=53.43 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=47.0
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhCC------------------------C-ceEEEEcCCCccCcccChHHHHHHHH
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSNP------------------------P-ELVFEIKGSDHAPFFSKPRALHRILV 386 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~~------------------------~-~~~~~i~~agH~~~~e~p~~v~~~i~ 386 (394)
.++|||..|+.|.+++.-..+.+.+.+. + .+++++.+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4899999999999998765555544331 2 46677789999996 59999999999
Q ss_pred HHHhhh
Q 016141 387 EISKIT 392 (394)
Q Consensus 387 ~fl~~~ 392 (394)
.|+...
T Consensus 312 ~fi~~~ 317 (319)
T PLN02213 312 RWISGQ 317 (319)
T ss_pred HHHcCC
Confidence 999753
No 186
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.24 E-value=0.002 Score=61.85 Aligned_cols=109 Identities=21% Similarity=0.261 Sum_probs=84.0
Q ss_pred CCCCceEEEEcCCCCchhcHH-----HHHHHHHhCCcEEEEecCCCCCCCCCCCC------CccCHHHHHHHHHHHHHHh
Q 016141 137 SPETSHFVLVHGGGFGAWCWY-----KTMTLLKESGFKVDAVDLTGSGVSSCDTN------SITSLEQYVKPLIDTFNEL 205 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~-----~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~l~~l 205 (394)
..++|..|+|-|=|.-...|- .+...-.+.|-.|+..+||-+|.|..... ...+.++...|+..+|+.+
T Consensus 83 ~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 83 KPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred cCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 567788888887666665562 23344455688999999999998853222 3456788888999999887
Q ss_pred CCC----C--cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 206 GNE----E--KVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 206 ~~~----~--~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+.+ . +++.+|-|+-|.++..+=+++|+.|.+.|.-++++.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 532 2 899999999999999999999999999998887764
No 187
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.22 E-value=0.0041 Score=52.99 Aligned_cols=106 Identities=20% Similarity=0.256 Sum_probs=66.3
Q ss_pred CCceEEEEcCCCCch-hcHHH---------------HHHHHHhCCcEEEEecCCC---CCCC-CCCCCCccCHHHHHHHH
Q 016141 139 ETSHFVLVHGGGFGA-WCWYK---------------TMTLLKESGFKVDAVDLTG---SGVS-SCDTNSITSLEQYVKPL 198 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~-~~~~~---------------~~~~l~~~g~~v~~~d~~G---~G~s-~~~~~~~~~~~~~~~~~ 198 (394)
....+||+||.|--. ..|.. ++..-.+.||.|++.+.-- +-.+ ..+.....+..+.+.-+
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yv 179 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYV 179 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHH
Confidence 345899999987643 45642 3444455699999987431 1111 11211223444444433
Q ss_pred H-HHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCc--ccceEEEeecccC
Q 016141 199 I-DTFNELGNEEKVILVGHDFGGACISYVMELFPS--KVAKAVFIAATML 245 (394)
Q Consensus 199 ~-~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~lVli~~~~~ 245 (394)
- .++.-.... .+++|.||+||...+.+..++|+ +|.++.+.++++.
T Consensus 180 w~~~v~pa~~~-sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 180 WKNIVLPAKAE-SVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMG 228 (297)
T ss_pred HHHHhcccCcc-eEEEEEeccCChhHHHHHHhcCCccceEEEEeeccccc
Confidence 2 233333444 99999999999999999999885 5777777777643
No 188
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.20 E-value=0.017 Score=54.64 Aligned_cols=36 Identities=17% Similarity=0.201 Sum_probs=31.7
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+++++|+|.||++|..+|.-.|..+.++|=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999998887666554
No 189
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.01 E-value=0.0019 Score=65.02 Aligned_cols=107 Identities=20% Similarity=0.212 Sum_probs=62.0
Q ss_pred CCceEEEEcCCCCchh----cHHHHHHHHHhCCcEEEEecCC----CCCCCCCCC--CCccCHHHHHH---HHHHHHHHh
Q 016141 139 ETSHFVLVHGGGFGAW----CWYKTMTLLKESGFKVDAVDLT----GSGVSSCDT--NSITSLEQYVK---PLIDTFNEL 205 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~----~~~~~~~~l~~~g~~v~~~d~~----G~G~s~~~~--~~~~~~~~~~~---~~~~~l~~l 205 (394)
.-|++|++||.+.... ....-...+++.+.-|+.+++| |+-.+.... ...+.+.|+.. +|.+-|..+
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~F 203 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAF 203 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhc
Confidence 3599999999744322 2233334556678999999998 443332111 12344555554 445555555
Q ss_pred CC-CCcEEEEEeChHHHHHHHHHHh--CCcccceEEEeecccC
Q 016141 206 GN-EEKVILVGHDFGGACISYVMEL--FPSKVAKAVFIAATML 245 (394)
Q Consensus 206 ~~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lVli~~~~~ 245 (394)
|- .++|.|+|||.||..+..++.. ....+.++|+.++...
T Consensus 204 GGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 204 GGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp TEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred ccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 52 2599999999999977666654 1246999999998554
No 190
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.96 E-value=0.024 Score=52.96 Aligned_cols=235 Identities=16% Similarity=0.114 Sum_probs=122.7
Q ss_pred eEEEEcCCCCchhcH-HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC-CcEEEEEeChH
Q 016141 142 HFVLVHGGGFGAWCW-YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE-EKVILVGHDFG 219 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~-~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvGhS~G 219 (394)
+||++=||.+..+-| .+......+.||.++.+-.|-+-..........++.....-+..++...+.+ .++++--.|+|
T Consensus 40 ~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~n 119 (350)
T KOG2521|consen 40 PIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGN 119 (350)
T ss_pred cEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCC
Confidence 555555666655554 5566777778999999988866544333334456666667777777776622 37777788999
Q ss_pred HHHHHHHH----HhC-C---cccceEEEeecccCCCCcchHHHHHhhcCchHHHHHHHHHHHhcCCCCCCCc--chhhHH
Q 016141 220 GACISYVM----ELF-P---SKVAKAVFIAATMLTSGQSALDTISQQMGSNDLMQQAQIFLYANGKQNPPTS--IDLDRT 289 (394)
Q Consensus 220 g~~a~~~a----~~~-p---~~v~~lVli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 289 (394)
|...+... .++ | +.+.++++.+.+....................... .+............ ......
T Consensus 120 g~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~ 196 (350)
T KOG2521|consen 120 GVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVA---RWARLNYHITLLTMAGNEGGAY 196 (350)
T ss_pred ceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHH---HHHhcCeEEEEEEeeecccchh
Confidence 98655433 122 2 24667888777654322111000000000000000 00000000000000 000000
Q ss_pred HHHHHhcccCCchhHHHHHHhccccCCcccccccccCCCCCCCcCEEEEecCCCCCCChHHHHHHHHhC----CCceEEE
Q 016141 290 LLRDLLFNRSAAKDVELALISMRPIPFAPVLEKLSVSDDNYGSVPRFYIKTLQDCAIPVSVQEAMINSN----PPELVFE 365 (394)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~PvLii~G~~D~~vp~~~~~~l~~~~----~~~~~~~ 365 (394)
.+...+............ ..+.. .......+.+.+++..|.++|.+..+.+.+.. -+++.+-
T Consensus 197 ~~~~~~~~~~~~r~~~~~----------~r~~~----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~ 262 (350)
T KOG2521|consen 197 LLGPLAEKISMSRKYHFL----------DRYEE----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVK 262 (350)
T ss_pred hhhhhhhccccccchHHH----------HHHHh----hhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEee
Confidence 000000000000000000 00000 00000267899999999999999888775443 2456677
Q ss_pred EcCCCccCccc-ChHHHHHHHHHHHhhhc
Q 016141 366 IKGSDHAPFFS-KPRALHRILVEISKITH 393 (394)
Q Consensus 366 i~~agH~~~~e-~p~~v~~~i~~fl~~~~ 393 (394)
+.++-|..++. .|..+.+...+|+....
T Consensus 263 ~~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 263 FKDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred ccCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 78899998876 59999999999998653
No 191
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.93 E-value=0.0028 Score=62.57 Aligned_cols=92 Identities=14% Similarity=0.224 Sum_probs=58.2
Q ss_pred hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC-CCccCHHHHHHHHHHHHHHh---CCCCcEEEEEeChHHHHHHHHHHh
Q 016141 154 WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT-NSITSLEQYVKPLIDTFNEL---GNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 154 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
..|..+++.|++.||. --++.|...--+.. .....-+++...+..+|+.. +-.++|+|+||||||.+++.+...
T Consensus 156 ~vw~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 156 FVWAVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred eeHHHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHh
Confidence 3679999999999986 23333332221111 01122345555566665543 323499999999999999998763
Q ss_pred CC---------------cccceEEEeecccCCC
Q 016141 230 FP---------------SKVAKAVFIAATMLTS 247 (394)
Q Consensus 230 ~p---------------~~v~~lVli~~~~~~~ 247 (394)
.. ..|++.|.++++....
T Consensus 234 v~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs 266 (642)
T PLN02517 234 VEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGV 266 (642)
T ss_pred ccccccccCCcchHHHHHHHHHheecccccCCc
Confidence 21 2489999999876543
No 192
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=96.86 E-value=0.053 Score=52.76 Aligned_cols=60 Identities=15% Similarity=0.131 Sum_probs=47.9
Q ss_pred cCEEEEecCCCCCCChHHHHHHHHhC-------------------------CCceEEEEcCCCccCcccChHHHHHHHHH
Q 016141 333 VPRFYIKTLQDCAIPVSVQEAMINSN-------------------------PPELVFEIKGSDHAPFFSKPRALHRILVE 387 (394)
Q Consensus 333 ~PvLii~G~~D~~vp~~~~~~l~~~~-------------------------~~~~~~~i~~agH~~~~e~p~~v~~~i~~ 387 (394)
.+++|..|+.|.++|.-..+.+.+.+ .+..+.++.||||.+..++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999999876655543322 11345788899999999999999999999
Q ss_pred HHhhh
Q 016141 388 ISKIT 392 (394)
Q Consensus 388 fl~~~ 392 (394)
|+...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 99754
No 193
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.80 E-value=0.004 Score=51.56 Aligned_cols=54 Identities=11% Similarity=0.190 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhC---CCCcEEEEEeChHHHHHHHHHHhCCc----ccceEEEeecccC
Q 016141 192 EQYVKPLIDTFNELG---NEEKVILVGHDFGGACISYVMELFPS----KVAKAVFIAATML 245 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~lVli~~~~~ 245 (394)
..+...+...++... ...+++++|||+||.+|..++..... .+..++.++++..
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 344445555554432 23499999999999999998887654 5677777777654
No 194
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.72 E-value=0.0064 Score=56.88 Aligned_cols=86 Identities=22% Similarity=0.239 Sum_probs=67.1
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh----CCCCcEEEEE
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL----GNEEKVILVG 215 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l----~~~~~~~lvG 215 (394)
...-||+.|=|+....=..+..+|.++|+.|+.+|-.-|-.|. .+.++.++|+..+++.. +.. ++.|+|
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~------rtPe~~a~Dl~r~i~~y~~~w~~~-~~~liG 332 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSE------RTPEQIAADLSRLIRFYARRWGAK-RVLLIG 332 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhcc------CCHHHHHHHHHHHHHHHHHhhCcc-eEEEEe
Confidence 3466777777776666678899999999999999965555443 46788888888888765 455 999999
Q ss_pred eChHHHHHHHHHHhCCc
Q 016141 216 HDFGGACISYVMELFPS 232 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~ 232 (394)
+|+|+-+.-..-.+.|.
T Consensus 333 ySfGADvlP~~~n~L~~ 349 (456)
T COG3946 333 YSFGADVLPFAYNRLPP 349 (456)
T ss_pred ecccchhhHHHHHhCCH
Confidence 99999988777766664
No 195
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.70 E-value=0.025 Score=47.78 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=65.7
Q ss_pred CceEEEEcCCCCchhcH----H----HHHH----HHHh--CCcEEEEecCCCCCCCCC-C--CCCccCHHHHHHHHHHHH
Q 016141 140 TSHFVLVHGGGFGAWCW----Y----KTMT----LLKE--SGFKVDAVDLTGSGVSSC-D--TNSITSLEQYVKPLIDTF 202 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~----~----~~~~----~l~~--~g~~v~~~d~~G~G~s~~-~--~~~~~~~~~~~~~~~~~l 202 (394)
..+.++++|.+.+...+ . .+.. .+.. .+=.|-++-|.||-.-.. . .....--+.-+.++..|+
T Consensus 19 ~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga~~L~~f~ 98 (177)
T PF06259_consen 19 DHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGAPRLARFL 98 (177)
T ss_pred CeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHHHHHHHHH
Confidence 45889999998776542 1 1111 1111 123455555555432210 0 111122355556777777
Q ss_pred HHhC----CCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 203 NELG----NEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 203 ~~l~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
+.|. .+..+.++|||+|+.++-.++...+..+..+|+++++...
T Consensus 99 ~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 99 DGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 7663 2348999999999999998888767789999999987643
No 196
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.53 E-value=0.0033 Score=60.03 Aligned_cols=86 Identities=24% Similarity=0.427 Sum_probs=59.5
Q ss_pred hcHHHHHHHHHhCCcE------EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH----hCCCCcEEEEEeChHHHHH
Q 016141 154 WCWYKTMTLLKESGFK------VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE----LGNEEKVILVGHDFGGACI 223 (394)
Q Consensus 154 ~~~~~~~~~l~~~g~~------v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~----l~~~~~~~lvGhS~Gg~~a 223 (394)
..|..+++.|..-||. -..+|+|= |.. .....+++...+...|+. -|-+ +|+||+|||||.+.
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRl---s~~---~~e~rd~yl~kLK~~iE~~~~~~G~k-kVvlisHSMG~l~~ 196 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRL---SYH---NSEERDQYLSKLKKKIETMYKLNGGK-KVVLISHSMGGLYV 196 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhh---ccC---ChhHHHHHHHHHHHHHHHHHHHcCCC-ceEEEecCCccHHH
Confidence 5789999999988887 34577772 111 112344455555555544 3445 99999999999999
Q ss_pred HHHHHhCCc--------ccceEEEeecccCC
Q 016141 224 SYVMELFPS--------KVAKAVFIAATMLT 246 (394)
Q Consensus 224 ~~~a~~~p~--------~v~~lVli~~~~~~ 246 (394)
+.+...+++ .|+++|-++++...
T Consensus 197 lyFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 197 LYFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 999998877 37777877776543
No 197
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.43 E-value=0.0081 Score=48.72 Aligned_cols=37 Identities=22% Similarity=0.414 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+...+.+..+++..... ++++.|||+||.+|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~-~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDY-SIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTS-EEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCc-cchhhccchHHHHHHHHHHh
Confidence 34455666655555544 89999999999999888865
No 198
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.42 E-value=0.043 Score=48.49 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=59.1
Q ss_pred CceEEEEcCCC--Cchh-cHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHH----HHHHHHh----CCC
Q 016141 140 TSHFVLVHGGG--FGAW-CWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPL----IDTFNEL----GNE 208 (394)
Q Consensus 140 ~~~vvl~HG~~--~~~~-~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~----~~~l~~l----~~~ 208 (394)
..+|=|+-|.. .... .|+.+.+.|+++||.|++.-+.- .++-...|+.+ ...++.+ +..
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~----------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV----------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC----------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34566666653 3333 48889999999999999976531 12222222222 2222222 221
Q ss_pred ---CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecc
Q 016141 209 ---EKVILVGHDFGGACISYVMELFPSKVAKAVFIAAT 243 (394)
Q Consensus 209 ---~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~ 243 (394)
-+++-||||+|+-+-+.+...++..-++-|+++-.
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 26788999999998888888776666777887754
No 199
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.23 E-value=0.03 Score=55.47 Aligned_cols=107 Identities=12% Similarity=0.143 Sum_probs=71.4
Q ss_pred CCCceEEEEcCCCCchh--cHHHHHHHHHhCCcEEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHHhCC-
Q 016141 138 PETSHFVLVHGGGFGAW--CWYKTMTLLKESGFKVDAVDLTGSGVSSCD-------TNSITSLEQYVKPLIDTFNELGN- 207 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~l~~l~~- 207 (394)
++.|.+|..+|.-+-.- .|..--..|.+.|+.....|.||=|.-... .....+++|+..-..-+++. |.
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~-gyt 546 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN-GYT 546 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc-CCC
Confidence 45677777777533321 244333345568888888899997754321 11334666666554444433 32
Q ss_pred -CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 208 -EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 208 -~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
+.+..+.|.|.||.++..+..++|+.+.++|+--|.+.
T Consensus 547 ~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 547 QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred CccceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 24899999999999999999999999999888776653
No 200
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=96.17 E-value=0.088 Score=52.00 Aligned_cols=104 Identities=18% Similarity=0.201 Sum_probs=67.9
Q ss_pred CCceEEEEcCCCCchh--cHHHHHHHHHhCCcEEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHHhCC--
Q 016141 139 ETSHFVLVHGGGFGAW--CWYKTMTLLKESGFKVDAVDLTGSGVSSCD-------TNSITSLEQYVKPLIDTFNELGN-- 207 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~-------~~~~~~~~~~~~~~~~~l~~l~~-- 207 (394)
+.|++|+--|...-+. .|........++|...+..+.||=|.-... .+....++|++.-...+++. |+
T Consensus 420 ~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gits 498 (648)
T COG1505 420 ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITS 498 (648)
T ss_pred CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCC
Confidence 5677777666543332 255555666777888899999998865321 01223344444443333332 33
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecc
Q 016141 208 EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAAT 243 (394)
Q Consensus 208 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~ 243 (394)
.+++.+.|-|-||.+.-.+..++|+.+.++|+--|.
T Consensus 499 pe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPl 534 (648)
T COG1505 499 PEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPL 534 (648)
T ss_pred HHHhhhccCCCCceEEEeeeccChhhhCceeeccch
Confidence 248999999999999988888899988777765543
No 201
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.05 E-value=0.011 Score=52.79 Aligned_cols=50 Identities=16% Similarity=0.397 Sum_probs=39.7
Q ss_pred HHHHHHHH-hCCC-CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 197 PLIDTFNE-LGNE-EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 197 ~~~~~l~~-l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
++.-++++ ..++ ++-.++|||+||.+++.....+|+.+...++++|....
T Consensus 123 ~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw 174 (264)
T COG2819 123 QLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWW 174 (264)
T ss_pred hhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhhh
Confidence 44445554 2222 36899999999999999999999999999999998654
No 202
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.95 E-value=0.021 Score=50.40 Aligned_cols=48 Identities=17% Similarity=0.247 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC----CcccceEEEeecccCC
Q 016141 197 PLIDTFNELGNEEKVILVGHDFGGACISYVMELF----PSKVAKAVFIAATMLT 246 (394)
Q Consensus 197 ~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~lVli~~~~~~ 246 (394)
-+..+++..+ +++++.|||.||.+|..++... .++|.+++..+++...
T Consensus 74 yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~ 125 (224)
T PF11187_consen 74 YLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFS 125 (224)
T ss_pred HHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCC
Confidence 3444444433 3799999999999999999874 3578899988887654
No 203
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=95.82 E-value=0.12 Score=54.80 Aligned_cols=99 Identities=13% Similarity=0.137 Sum_probs=71.5
Q ss_pred CCCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 136 ESPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 136 ~~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
-..+.|+++|+|..-+....+..++..|. .|.||.-.-..-...++++.+.-...-++++....+..|+|
T Consensus 2119 ~~se~~~~Ffv~pIEG~tt~l~~la~rle----------~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2119 VQSEEPPLFFVHPIEGFTTALESLASRLE----------IPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred hcccCCceEEEeccccchHHHHHHHhhcC----------CcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 34678999999998777777766665543 24444333223345688888888777888887777999999
Q ss_pred eChHHHHHHHHHHhCC--cccceEEEeeccc
Q 016141 216 HDFGGACISYVMELFP--SKVAKAVFIAATM 244 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p--~~v~~lVli~~~~ 244 (394)
+|+|+.++..+|.... +....+|++++..
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 9999999998886533 3356688888764
No 204
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.37 E-value=0.038 Score=47.73 Aligned_cols=69 Identities=12% Similarity=0.038 Sum_probs=46.4
Q ss_pred HHHHhCCcEEEEecCCCCCCCCCC-----C---CCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 161 TLLKESGFKVDAVDLTGSGVSSCD-----T---NSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 161 ~~l~~~g~~v~~~d~~G~G~s~~~-----~---~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
..+... .+|++|=+|=....... . .......|..+....+|++.+.+.+++|+|||.|+.+.+.+...+
T Consensus 40 s~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 40 SAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 344444 67888877633221111 0 022345666667777888887777999999999999999998764
No 205
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.37 E-value=0.028 Score=49.88 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.6
Q ss_pred CcEEEEEeChHHHHHHHHHHh
Q 016141 209 EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
.++++.|||+||.+|..++..
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 489999999999999888765
No 206
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.31 E-value=0.053 Score=44.24 Aligned_cols=80 Identities=19% Similarity=0.159 Sum_probs=54.6
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcE-EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFK-VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
..||+.-|||..+..+..++ |.+. +. ++++|+..... ..++..+ +.+.||++|||
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lpeN-~dl~lcYDY~dl~l-------dfDfsAy--------------~hirlvAwSMG 67 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LPEN-HDLLLCYDYQDLNL-------DFDFSAY--------------RHIRLVAWSMG 67 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CCCC-CcEEEEeehhhcCc-------ccchhhh--------------hhhhhhhhhHH
Confidence 48899999999988887654 3343 44 56788763321 1222211 26779999999
Q ss_pred HHHHHHHHHhCCcccceEEEeecccCC
Q 016141 220 GACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 220 g~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
-.+|-++....+ +++.+.+++...+
T Consensus 68 VwvAeR~lqg~~--lksatAiNGTgLp 92 (214)
T COG2830 68 VWVAERVLQGIR--LKSATAINGTGLP 92 (214)
T ss_pred HHHHHHHHhhcc--ccceeeecCCCCC
Confidence 999999988664 7777888876543
No 207
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.22 E-value=0.058 Score=45.92 Aligned_cols=103 Identities=17% Similarity=0.205 Sum_probs=53.3
Q ss_pred eEEEEcCCCCchhc---HHHHHHHHHhC-C---cEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHh---CCCCcE
Q 016141 142 HFVLVHGGGFGAWC---WYKTMTLLKES-G---FKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNEL---GNEEKV 211 (394)
Q Consensus 142 ~vvl~HG~~~~~~~---~~~~~~~l~~~-g---~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l---~~~~~~ 211 (394)
.||+..|.+..... =..+...|.+. | ..+..+++|-..... ....+..+=+.++...++.. ..+.++
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~ki 83 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTKI 83 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSEE
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 46666666554332 11222333322 2 445556666432211 11223333344444444332 234599
Q ss_pred EEEEeChHHHHHHHHHHh--C----CcccceEEEeecccCCC
Q 016141 212 ILVGHDFGGACISYVMEL--F----PSKVAKAVFIAATMLTS 247 (394)
Q Consensus 212 ~lvGhS~Gg~~a~~~a~~--~----p~~v~~lVli~~~~~~~ 247 (394)
+|+|+|.|+.++..++.. . .++|.++|+++-+....
T Consensus 84 vl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 84 VLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp EEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBT
T ss_pred EEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccC
Confidence 999999999999999876 2 35799999998776543
No 208
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.17 E-value=0.065 Score=51.97 Aligned_cols=110 Identities=15% Similarity=0.151 Sum_probs=71.3
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHH-------------------HHhCCcEEEEec-CCCCCCCCC-CCCCccCHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTL-------------------LKESGFKVDAVD-LTGSGVSSC-DTNSITSLEQYVK 196 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~-------------------l~~~g~~v~~~d-~~G~G~s~~-~~~~~~~~~~~~~ 196 (394)
.+.|.|+.+.|.++++..|-.+.+. +.+. -.++-+| .-|.|.|.. ......+.....+
T Consensus 99 ~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 99 ANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhccch
Confidence 3578999999999999988665321 1111 3588899 559998874 2223344444555
Q ss_pred HHHHHHHHh--------CCCCcEEEEEeChHHHHHHHHHHhCCc---ccceEEEeecccCCCC
Q 016141 197 PLIDTFNEL--------GNEEKVILVGHDFGGACISYVMELFPS---KVAKAVFIAATMLTSG 248 (394)
Q Consensus 197 ~~~~~l~~l--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lVli~~~~~~~~ 248 (394)
|+..+++.+ ++..+.+|+|-|+||.-+..+|...-+ ..+++|++.+.....+
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng 240 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNG 240 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCC
Confidence 554444332 222489999999999988777764333 3677777777665444
No 209
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.95 E-value=0.089 Score=53.26 Aligned_cols=106 Identities=21% Similarity=0.250 Sum_probs=62.7
Q ss_pred CceEEEEcCCCCchhc---H--HHHHHHHHhCCcEEEEecCC----CCCCCCCC-CCCccCHHHHHH---HHHHHHHHhC
Q 016141 140 TSHFVLVHGGGFGAWC---W--YKTMTLLKESGFKVDAVDLT----GSGVSSCD-TNSITSLEQYVK---PLIDTFNELG 206 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~---~--~~~~~~l~~~g~~v~~~d~~----G~G~s~~~-~~~~~~~~~~~~---~~~~~l~~l~ 206 (394)
-|++|++||.+..... + ......+..+..-|+.+.+| |+...... ....+.+.|+.. ++..-|...|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6899999998654333 2 11222333435677778777 33322211 123345555544 4555555564
Q ss_pred -CCCcEEEEEeChHHHHHHHHHHh--CCcccceEEEeecccC
Q 016141 207 -NEEKVILVGHDFGGACISYVMEL--FPSKVAKAVFIAATML 245 (394)
Q Consensus 207 -~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~lVli~~~~~ 245 (394)
..++|.|+|||.||..+..+... ....+.++|.+++...
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 33599999999999988766652 1235677777776654
No 210
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.74 E-value=0.036 Score=52.23 Aligned_cols=89 Identities=20% Similarity=0.341 Sum_probs=52.5
Q ss_pred CCCCceEEEEcCCCC-chhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-Cc-cCHHHHHHHHHHHHHHhCCCCcEEE
Q 016141 137 SPETSHFVLVHGGGF-GAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-SI-TSLEQYVKPLIDTFNELGNEEKVIL 213 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~-~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-~~-~~~~~~~~~~~~~l~~l~~~~~~~l 213 (394)
...+..||++||+-+ +...|...+....+. +.=..+..+|+-.....+. +. .--+..++++.+.+....++ ++..
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk-~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~-kISf 154 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKK-MPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIE-KISF 154 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcC-CCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccc-eeee
Confidence 345568999999977 567787777666654 2222333444432222111 11 11133444555555555566 9999
Q ss_pred EEeChHHHHHHHHH
Q 016141 214 VGHDFGGACISYVM 227 (394)
Q Consensus 214 vGhS~Gg~~a~~~a 227 (394)
||||+||.++-.+.
T Consensus 155 vghSLGGLvar~AI 168 (405)
T KOG4372|consen 155 VGHSLGGLVARYAI 168 (405)
T ss_pred eeeecCCeeeeEEE
Confidence 99999999876544
No 211
>PLN02162 triacylglycerol lipase
Probab=94.70 E-value=0.09 Score=50.81 Aligned_cols=36 Identities=31% Similarity=0.338 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHH
Q 016141 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
.++.+.+..++..... .++++.|||+||.+|..+|.
T Consensus 262 ~~I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 262 YTIRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 3444555556655443 38999999999999988764
No 212
>PLN00413 triacylglycerol lipase
Probab=94.54 E-value=0.11 Score=50.34 Aligned_cols=52 Identities=19% Similarity=0.302 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHh---C-----CcccceEEEeeccc
Q 016141 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMEL---F-----PSKVAKAVFIAATM 244 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~---~-----p~~v~~lVli~~~~ 244 (394)
.++.+.+..+++..... ++++.|||+||++|..+|.. + ..++.+++..+.+-
T Consensus 268 y~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PR 327 (479)
T PLN00413 268 YTILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPR 327 (479)
T ss_pred HHHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCC
Confidence 34556677777665544 89999999999999888742 1 12344566555543
No 213
>PLN02454 triacylglycerol lipase
Probab=94.41 E-value=0.092 Score=50.21 Aligned_cols=34 Identities=15% Similarity=0.301 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCC-CcEEEEEeChHHHHHHHHHHh
Q 016141 196 KPLIDTFNELGNE-EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 196 ~~~~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
..|..+++..... -+|++.|||+||.+|+.+|..
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3444444443322 149999999999999988854
No 214
>PLN02571 triacylglycerol lipase
Probab=93.96 E-value=0.097 Score=50.12 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCC-CcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELGNE-EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+++..+|..+++..... -++++.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 45666777777665432 268999999999999988864
No 215
>PLN02310 triacylglycerol lipase
Probab=93.86 E-value=0.17 Score=48.37 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhC---CCCcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELG---NEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+++.+.|..+++... .+.+|++.|||+||.+|+.+|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 445566677776552 22379999999999999888753
No 216
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.48 E-value=0.26 Score=46.72 Aligned_cols=106 Identities=17% Similarity=0.086 Sum_probs=80.8
Q ss_pred CCCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC--CccCHHHHHHHHHHHHHHhC--CCCcEE
Q 016141 137 SPETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN--SITSLEQYVKPLIDTFNELG--NEEKVI 212 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~~~~l~~l~--~~~~~~ 212 (394)
+.+.|+|+..-|.+.+..-...-...|.. -+-+.+++|-+|.|...+. ...++++-+.|...++..+. ..++.+
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Lld--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWI 137 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLLD--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWI 137 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhhc--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCce
Confidence 45779999999998765444322223332 4789999999999975443 45788999999888887774 124899
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 213 LVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
--|-|=||++++.+=.-+|+.|++.|.--++.
T Consensus 138 STG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 138 STGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred ecCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 99999999999998888999999988765554
No 217
>PLN02408 phospholipase A1
Probab=93.22 E-value=0.15 Score=48.12 Aligned_cols=37 Identities=16% Similarity=0.272 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhCCC-CcEEEEEeChHHHHHHHHHHh
Q 016141 193 QYVKPLIDTFNELGNE-EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 193 ~~~~~~~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+..++|..+++..... .+|++.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3445666666665432 259999999999999888764
No 218
>PLN02934 triacylglycerol lipase
Probab=92.59 E-value=0.2 Score=48.95 Aligned_cols=36 Identities=25% Similarity=0.318 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHH
Q 016141 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
.+....+..+++..... ++++.|||+||.+|..+|.
T Consensus 305 ~~v~~~lk~ll~~~p~~-kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA-KFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCC-eEEEeccccHHHHHHHHHH
Confidence 34555666667665444 8999999999999988874
No 219
>PLN02324 triacylglycerol lipase
Probab=92.53 E-value=0.21 Score=47.79 Aligned_cols=37 Identities=19% Similarity=0.182 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCCC-CcEEEEEeChHHHHHHHHHHh
Q 016141 193 QYVKPLIDTFNELGNE-EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 193 ~~~~~~~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
++.+.|..+++..... .+|++.|||+||.+|+.+|..
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3444566666655422 369999999999999888753
No 220
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=92.46 E-value=0.34 Score=45.48 Aligned_cols=39 Identities=28% Similarity=0.517 Sum_probs=31.1
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCcc-----cceEEEeecccCCC
Q 016141 209 EKVILVGHDFGGACISYVMELFPSK-----VAKAVFIAATMLTS 247 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p~~-----v~~lVli~~~~~~~ 247 (394)
.+|.|||||+|+.+...+.....++ |..+++++++....
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 3899999999999988777654433 89999999877553
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.43 E-value=0.24 Score=42.09 Aligned_cols=61 Identities=10% Similarity=0.063 Sum_probs=47.9
Q ss_pred CcCEEEEecCCCCCCChHHHH---HHHHhCCC--ceEEEEcCCCccCcccC---hHHHHHHHHHHHhhh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQE---AMINSNPP--ELVFEIKGSDHAPFFSK---PRALHRILVEISKIT 392 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~---~l~~~~~~--~~~~~i~~agH~~~~e~---p~~v~~~i~~fl~~~ 392 (394)
++++|-|-|+.|.+..+...+ .+...+|. ...++.+|+||+-.+.- .+++.-.|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 588899999999999876544 45555553 46778899999988875 478999999999764
No 222
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.36 E-value=0.2 Score=49.08 Aligned_cols=38 Identities=24% Similarity=0.274 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhC---CCCcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELG---NEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
++..++|..+++... .+.++++.|||+||.+|+..|..
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 345567777776653 22379999999999999888753
No 223
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.15 E-value=0.53 Score=39.06 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=33.5
Q ss_pred CcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 209 EKVILVGHDFGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
....+-|-||||+.|+.+.-++|+...++|.+++...
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 3778889999999999999999999999999998753
No 224
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=92.14 E-value=0.21 Score=45.40 Aligned_cols=107 Identities=12% Similarity=0.118 Sum_probs=60.4
Q ss_pred CCceEEEEcCCCC--chhcHHHHHHHHHhCC----cEEEEecCCCCCCC-CCCCCCccCHHHHHHHHHHHHHHh----CC
Q 016141 139 ETSHFVLVHGGGF--GAWCWYKTMTLLKESG----FKVDAVDLTGSGVS-SCDTNSITSLEQYVKPLIDTFNEL----GN 207 (394)
Q Consensus 139 ~~~~vvl~HG~~~--~~~~~~~~~~~l~~~g----~~v~~~d~~G~G~s-~~~~~~~~~~~~~~~~~~~~l~~l----~~ 207 (394)
+-|++++.||-.. +...+.. .+.|...| -.++.+|.----.. ............++++|.=+++.. ..
T Consensus 97 k~pvl~~~DG~~~~~~g~i~~~-~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~~~ 175 (299)
T COG2382 97 KYPVLYLQDGQDWFRSGRIPRI-LDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTSAD 175 (299)
T ss_pred cccEEEEeccHHHHhcCChHHH-HHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccccc
Confidence 4578999998421 1122333 33333332 34555554310000 000011122333444444444442 12
Q ss_pred CCcEEEEEeChHHHHHHHHHHhCCcccceEEEeecccCC
Q 016141 208 EEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 208 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
.+.-+|.|.|+||.+++..+.++|+.+..++..++....
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~ 214 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWW 214 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCchhhceeeccCCcccc
Confidence 235689999999999999999999999999999887643
No 225
>PLN02753 triacylglycerol lipase
Probab=92.12 E-value=0.23 Score=48.77 Aligned_cols=37 Identities=24% Similarity=0.390 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHhCC----CCcEEEEEeChHHHHHHHHHH
Q 016141 192 EQYVKPLIDTFNELGN----EEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
+++...|..+++.... +.+|++.|||+||.+|+.+|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3444556666665532 248999999999999998875
No 226
>PLN02802 triacylglycerol lipase
Probab=92.11 E-value=0.25 Score=48.38 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEEeChHHHHHHHHHHh
Q 016141 193 QYVKPLIDTFNELGN-EEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 193 ~~~~~~~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
++.++|..+++...- +.+|++.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444566666665532 2368999999999999887764
No 227
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=91.71 E-value=0.61 Score=43.49 Aligned_cols=59 Identities=8% Similarity=0.082 Sum_probs=44.3
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhCCCc-eEEEEcCCCccCcccChHHHHHHHHHHHh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSNPPE-LVFEIKGSDHAPFFSKPRALHRILVEISK 390 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~~~~-~~~~i~~agH~~~~e~p~~v~~~i~~fl~ 390 (394)
.+|-.+|.+..|.+.+++.+......+|+. -+..+|+..|...-..-++...-+.++++
T Consensus 329 alpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~~i~esl~~flnrfq 388 (507)
T COG4287 329 ALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQFIKESLEPFLNRFQ 388 (507)
T ss_pred cccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHHHHHHHHHHHHHHHh
Confidence 489999999999999999999999999985 57788999998655443333333344443
No 228
>PLN02761 lipase class 3 family protein
Probab=91.67 E-value=0.28 Score=48.17 Aligned_cols=37 Identities=19% Similarity=0.263 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhC-----CCCcEEEEEeChHHHHHHHHHH
Q 016141 192 EQYVKPLIDTFNELG-----NEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
+++...|..+++... .+.+|++.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 344556666666552 2237999999999999988775
No 229
>PLN02719 triacylglycerol lipase
Probab=90.72 E-value=0.4 Score=46.97 Aligned_cols=38 Identities=24% Similarity=0.344 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHhCC----CCcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELGN----EEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
+++...|..+++.... +.+|.+.|||+||.+|..+|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 3344556666655431 2379999999999999988753
No 230
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.55 E-value=1.2 Score=44.11 Aligned_cols=81 Identities=15% Similarity=0.141 Sum_probs=53.4
Q ss_pred HhCCcEEEEecCCCCCCCCC--CCCCccCHHHHH-----------HHHHHHHHHh-C-CCCcEEEEEeChHHHHHHHHHH
Q 016141 164 KESGFKVDAVDLTGSGVSSC--DTNSITSLEQYV-----------KPLIDTFNEL-G-NEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 164 ~~~g~~v~~~d~~G~G~s~~--~~~~~~~~~~~~-----------~~~~~~l~~l-~-~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
..+||.++.=|- ||..+.. ......+.+.+. .--.++++.. + ....-+..|.|.||.-++..|+
T Consensus 56 ~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQ 134 (474)
T PF07519_consen 56 LARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQ 134 (474)
T ss_pred hhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHH
Confidence 345999999994 6665533 111112222222 1222333332 2 1237899999999999999999
Q ss_pred hCCcccceEEEeecccC
Q 016141 229 LFPSKVAKAVFIAATML 245 (394)
Q Consensus 229 ~~p~~v~~lVli~~~~~ 245 (394)
++|+..++||.-+|...
T Consensus 135 ryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 135 RYPEDFDGILAGAPAIN 151 (474)
T ss_pred hChhhcCeEEeCCchHH
Confidence 99999999999998764
No 231
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=89.88 E-value=0.26 Score=33.87 Aligned_cols=19 Identities=21% Similarity=0.228 Sum_probs=11.6
Q ss_pred CCCceEEEEcCCCCchhcH
Q 016141 138 PETSHFVLVHGGGFGAWCW 156 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~ 156 (394)
..+|+|+|.||+.+++..|
T Consensus 41 ~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 41 KKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT--EEEEE--TT--GGGG
T ss_pred CCCCcEEEECCcccChHHH
Confidence 5678999999999999988
No 232
>PLN02847 triacylglycerol lipase
Probab=88.77 E-value=0.78 Score=45.80 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=18.0
Q ss_pred CcEEEEEeChHHHHHHHHHHh
Q 016141 209 EKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 389999999999999877754
No 233
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.72 E-value=26 Score=34.48 Aligned_cols=93 Identities=16% Similarity=0.052 Sum_probs=60.8
Q ss_pred CccCCCCCceEEEEcCCCCchhcHHH--HHHHHHhCCcE-EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCC-
Q 016141 133 PKIESPETSHFVLVHGGGFGAWCWYK--TMTLLKESGFK-VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNE- 208 (394)
Q Consensus 133 ~~~~~~~~~~vvl~HG~~~~~~~~~~--~~~~l~~~g~~-v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~- 208 (394)
...++-..|..|...|+-. .+-|.. ++..| |.. .+.-|.|=-|.+-..-...+ -+.+.+-|...|++||.+
T Consensus 282 FnPGD~KPPL~VYFSGyR~-aEGFEgy~MMk~L---g~PfLL~~DpRleGGaFYlGs~ey-E~~I~~~I~~~L~~LgF~~ 356 (511)
T TIGR03712 282 FNPGDFKPPLNVYFSGYRP-AEGFEGYFMMKRL---GAPFLLIGDPRLEGGAFYLGSDEY-EQGIINVIQEKLDYLGFDH 356 (511)
T ss_pred cCCcCCCCCeEEeeccCcc-cCcchhHHHHHhc---CCCeEEeeccccccceeeeCcHHH-HHHHHHHHHHHHHHhCCCH
Confidence 3444456688999999855 444433 33444 333 44457776666532221112 345556777888999876
Q ss_pred CcEEEEEeChHHHHHHHHHHhC
Q 016141 209 EKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
..++|-|-|||.+-|+.++++.
T Consensus 357 ~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 357 DQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred HHeeeccccccchhhhhhcccC
Confidence 5799999999999999999864
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=88.51 E-value=0.75 Score=43.40 Aligned_cols=37 Identities=22% Similarity=0.186 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHh
Q 016141 192 EQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 192 ~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
..+.+++..+++...- -+|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 5666777777777764 489999999999999888864
No 235
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=87.46 E-value=6.9 Score=29.66 Aligned_cols=85 Identities=15% Similarity=0.178 Sum_probs=54.7
Q ss_pred hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH--HHHHHHHhCC
Q 016141 154 WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA--CISYVMELFP 231 (394)
Q Consensus 154 ~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~--~a~~~a~~~p 231 (394)
..|..+.+.+..+||-.=.+.++.+|.+....-.....+.=...|..+++.+-.. +++|||=|--.= +-..+|.++|
T Consensus 11 nly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~~~P 89 (100)
T PF09949_consen 11 NLYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIARRFP 89 (100)
T ss_pred HHHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHHHCC
Confidence 3455666777777887777777777654322111111123345677777777655 999999885543 4456788899
Q ss_pred cccceEEE
Q 016141 232 SKVAKAVF 239 (394)
Q Consensus 232 ~~v~~lVl 239 (394)
++|.++.+
T Consensus 90 ~~i~ai~I 97 (100)
T PF09949_consen 90 GRILAIYI 97 (100)
T ss_pred CCEEEEEE
Confidence 99988754
No 236
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.26 E-value=1.4 Score=43.72 Aligned_cols=57 Identities=18% Similarity=0.395 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHHhC--CCCcEEEEEeChHHHHHHHHHHh-----CCc------ccceEEEeecccCC
Q 016141 190 SLEQYVKPLIDTFNELG--NEEKVILVGHDFGGACISYVMEL-----FPS------KVAKAVFIAATMLT 246 (394)
Q Consensus 190 ~~~~~~~~~~~~l~~l~--~~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~lVli~~~~~~ 246 (394)
++..-...+...+...+ .+.+|+.|||||||.++=.+... .|+ ...|+|+++.+...
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrG 574 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRG 574 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCC
Confidence 44444445555555544 34699999999999988655543 233 37889999887654
No 237
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=87.17 E-value=2.3 Score=39.03 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=70.9
Q ss_pred CCCceEEEEcCCCCchhc----HHHHH-----------HHHHhCCcEEEEecCC-CCCCCCCCCC--CccCHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWC----WYKTM-----------TLLKESGFKVDAVDLT-GSGVSSCDTN--SITSLEQYVKPLI 199 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~----~~~~~-----------~~l~~~g~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~~ 199 (394)
...|..+.+.|.++.+.. |..+- ..|.. -.++.+|-| |.|.|--+.. ...+.++++.|+.
T Consensus 29 s~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~ 106 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLV 106 (414)
T ss_pred cCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHHH
Confidence 456888889888665533 43332 22333 467777766 8888853332 4456788999999
Q ss_pred HHHHHh-------CCCCcEEEEEeChHHHHHHHHHHhCCc---------ccceEEEeecccC
Q 016141 200 DTFNEL-------GNEEKVILVGHDFGGACISYVMELFPS---------KVAKAVFIAATML 245 (394)
Q Consensus 200 ~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---------~v~~lVli~~~~~ 245 (394)
++++.+ +. .+++|+.-|+||-+|..++...-+ ...+++|-++...
T Consensus 107 ~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 107 ELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred HHHHHHHhcCccccc-cceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 999875 22 489999999999999888864322 3566777666543
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=86.29 E-value=5.5 Score=35.22 Aligned_cols=80 Identities=20% Similarity=0.192 Sum_probs=46.5
Q ss_pred CcEEEEecCCCC-CC-C-CCCCCCccCHHHHHHHHHHHHHH-hCCCCcEEEEEeChHHHHHHHHHHhCCc------ccce
Q 016141 167 GFKVDAVDLTGS-GV-S-SCDTNSITSLEQYVKPLIDTFNE-LGNEEKVILVGHDFGGACISYVMELFPS------KVAK 236 (394)
Q Consensus 167 g~~v~~~d~~G~-G~-s-~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~ 236 (394)
|+.+..+++|.. +- + -.......++.+=++.+.+.++. ...+++++++|+|+|+.++...+.+.-+ ..-.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 567777777751 10 0 00111234555555566665554 2244699999999999999877765311 2345
Q ss_pred EEEeecccCC
Q 016141 237 AVFIAATMLT 246 (394)
Q Consensus 237 lVli~~~~~~ 246 (394)
+|+++-+...
T Consensus 82 fVl~gnP~rp 91 (225)
T PF08237_consen 82 FVLIGNPRRP 91 (225)
T ss_pred EEEecCCCCC
Confidence 6776655443
No 239
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=85.71 E-value=0.69 Score=35.92 Aligned_cols=25 Identities=20% Similarity=0.299 Sum_probs=14.8
Q ss_pred CCCCCceEEEEcCCCCchhcHHHHH
Q 016141 136 ESPETSHFVLVHGGGFGAWCWYKTM 160 (394)
Q Consensus 136 ~~~~~~~vvl~HG~~~~~~~~~~~~ 160 (394)
...+..+|||+|||+++-..|.+++
T Consensus 88 ~~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 88 KRPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp S-TT-EEEEEE--SS--GGGGHHHH
T ss_pred CCCCCeEEEEECCCCccHHhHHhhC
Confidence 3456679999999999988877653
No 240
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=80.40 E-value=3.1 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC
Q 016141 197 PLIDTFNELGNEEKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 197 ~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
||...+..+-.+.++.|-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444445569999999999999998888764
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=80.40 E-value=3.1 Score=37.54 Aligned_cols=35 Identities=23% Similarity=0.428 Sum_probs=25.9
Q ss_pred HHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC
Q 016141 197 PLIDTFNELGNEEKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 197 ~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
||...+..+-.+.++.|-|||+||.+|..+..++.
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 34444444445569999999999999998888764
No 242
>PRK12467 peptide synthase; Provisional
Probab=75.88 E-value=17 Score=46.15 Aligned_cols=98 Identities=16% Similarity=0.036 Sum_probs=69.7
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
+.|++.|........+..+...|... ..++.+..++.-.... ...++++++....+.+.......+..+.|+|+||
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~~-~~~~~l~~~~~~~d~~---~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEGD-RHVLGLTCRHLLDDGW---QDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGG 3768 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCCC-CcEEEEeccccccccC---CccchHHHHHHHHHHHHHhccCCCeeeeeeecch
Confidence 56999999988888888888777653 6788877665432221 2346777777777777776554589999999999
Q ss_pred HHHHHHHHh---CCcccceEEEeec
Q 016141 221 ACISYVMEL---FPSKVAKAVFIAA 242 (394)
Q Consensus 221 ~~a~~~a~~---~p~~v~~lVli~~ 242 (394)
.++..++.. ..+.+..+.++..
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~~ 3793 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFDN 3793 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEec
Confidence 999887764 3445665555543
No 243
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=73.73 E-value=36 Score=34.24 Aligned_cols=102 Identities=22% Similarity=0.178 Sum_probs=55.9
Q ss_pred CCceEEEEcCCCCchhc---HHHHHHHHH-hCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHH---HhCCC-Cc
Q 016141 139 ETSHFVLVHGGGFGAWC---WYKTMTLLK-ESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFN---ELGNE-EK 210 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~---~~~~~~~l~-~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~---~l~~~-~~ 210 (394)
++-.||-+||.|.-... .....+..+ .-|.-|+.+|+-=--... ....+++..-....+|+ .+|.. ++
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaP----FPRaleEv~fAYcW~inn~allG~TgEr 470 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAP----FPRALEEVFFAYCWAINNCALLGSTGER 470 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCC----CCcHHHHHHHHHHHHhcCHHHhCcccce
Confidence 34478889998765433 222222222 236899999974322222 22334444433334443 34432 69
Q ss_pred EEEEEeChHHHHHHHHHHh----CCcccceEEEeeccc
Q 016141 211 VILVGHDFGGACISYVMEL----FPSKVAKAVFIAATM 244 (394)
Q Consensus 211 ~~lvGhS~Gg~~a~~~a~~----~p~~v~~lVli~~~~ 244 (394)
|+++|-|.||.+.+..+.+ .=-.-+|+++.-++.
T Consensus 471 iv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 471 IVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred EEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 9999999999855444432 221245777766543
No 244
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=73.54 E-value=17 Score=31.44 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=50.9
Q ss_pred HHHHHHhCCc-EEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeCh----HHHHHHHHHHhCC-c
Q 016141 159 TMTLLKESGF-KVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDF----GGACISYVMELFP-S 232 (394)
Q Consensus 159 ~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~ 232 (394)
....+...|. +|+..|.++. ..++.+.+++.+.++++..+ . .++|+|+|. |..++..+|.+.. .
T Consensus 68 ~~~~l~~~G~d~V~~~~~~~~--------~~~~~e~~a~al~~~i~~~~-p-~lVL~~~t~~~~~grdlaprlAarLga~ 137 (202)
T cd01714 68 ALREALAMGADRAILVSDRAF--------AGADTLATAKALAAAIKKIG-V-DLILTGKQSIDGDTGQVGPLLAELLGWP 137 (202)
T ss_pred HHHHHHHcCCCEEEEEecccc--------cCCChHHHHHHHHHHHHHhC-C-CEEEEcCCcccCCcCcHHHHHHHHhCCC
Confidence 3344555676 6888776532 23678999999999998887 4 799999998 7789988887643 2
Q ss_pred ccceEEEe
Q 016141 233 KVAKAVFI 240 (394)
Q Consensus 233 ~v~~lVli 240 (394)
.+..++-+
T Consensus 138 lvsdv~~l 145 (202)
T cd01714 138 QITYVSKI 145 (202)
T ss_pred ccceEEEE
Confidence 34444444
No 245
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.56 E-value=7.3 Score=38.26 Aligned_cols=47 Identities=23% Similarity=0.312 Sum_probs=34.4
Q ss_pred hCCCCcEEEEEeChHHHHHHHHHHhC-----CcccceEEEeecccCCCCcchH
Q 016141 205 LGNEEKVILVGHDFGGACISYVMELF-----PSKVAKAVFIAATMLTSGQSAL 252 (394)
Q Consensus 205 l~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~lVli~~~~~~~~~~~~ 252 (394)
+|.. +|.|||+|+|+-+...+.... -..|.-+|+++++.......+.
T Consensus 444 qG~R-PVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~ 495 (633)
T KOG2385|consen 444 QGNR-PVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWL 495 (633)
T ss_pred cCCC-ceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHH
Confidence 3555 999999999999888666532 2348899999998876544433
No 246
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=63.03 E-value=54 Score=29.96 Aligned_cols=40 Identities=10% Similarity=0.157 Sum_probs=28.0
Q ss_pred CHHHHHHHHH-HHHHHhCCCCcEEEEEeChHHHHHHHHHHh
Q 016141 190 SLEQYVKPLI-DTFNELGNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 190 ~~~~~~~~~~-~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
.+++.+.+.. .+.+.....+++.++|+|-|+++|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 3444444333 333555655689999999999999998864
No 247
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=62.62 E-value=35 Score=27.11 Aligned_cols=62 Identities=18% Similarity=0.148 Sum_probs=37.6
Q ss_pred CCCCceEEEEcCCCCchhcH--HHHHHHHHhCCcE---EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Q 016141 137 SPETSHFVLVHGGGFGAWCW--YKTMTLLKESGFK---VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~~~~~~--~~~~~~l~~~g~~---v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~ 204 (394)
.+++|.|+-+||+.+....| .-+++.|-..|.. |..+...- ..| ....++++-+++..+|..
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~----hFP--~~~~v~~Yk~~L~~~I~~ 115 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATH----HFP--HNSNVDEYKEQLKSWIRG 115 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccc----cCC--CchHHHHHHHHHHHHHHH
Confidence 57789999999999988877 3455666555432 22222111 111 224567777777777654
No 248
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=62.19 E-value=91 Score=30.11 Aligned_cols=99 Identities=15% Similarity=0.119 Sum_probs=62.6
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC----------------------CccCHHHHHHHH
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN----------------------SITSLEQYVKPL 198 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~----------------------~~~~~~~~~~~~ 198 (394)
++|+++--+-.-...+..+.+.+.+.|..|+.+|.==.|......+ ....++.+++-.
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 3455553333334557778888888999999999754444332110 011233334444
Q ss_pred HHHHHHh----CCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEe
Q 016141 199 IDTFNEL----GNEEKVILVGHDFGGACISYVMELFPSKVAKAVFI 240 (394)
Q Consensus 199 ~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli 240 (394)
..++..+ .++ -|+-+|-|.|..++.......|--+-+++..
T Consensus 82 ~~~v~~l~~~g~i~-Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKID-GVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCcc-EEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 4455444 244 7888999999999999999888767776653
No 249
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=59.70 E-value=57 Score=31.06 Aligned_cols=87 Identities=22% Similarity=0.273 Sum_probs=62.2
Q ss_pred CceEEEEcCCCCch-------hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEE
Q 016141 140 TSHFVLVHGGGFGA-------WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVI 212 (394)
Q Consensus 140 ~~~vvl~HG~~~~~-------~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 212 (394)
...||++||-..++ +.|..++..+.++|+ +-.+|.--.|.-+ .+++.+.-+..++.... -.
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-ip~~D~AYQGF~~-------GleeDa~~lR~~a~~~~----~~ 238 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGL-IPFFDIAYQGFAD-------GLEEDAYALRLFAEVGP----EL 238 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-eeeeehhhhhhcc-------chHHHHHHHHHHHHhCC----cE
Confidence 35799999876655 459999999998864 5567766555432 36666667777666542 28
Q ss_pred EEEeChHHHHHHHHHHhCCcccceEEEeecc
Q 016141 213 LVGHDFGGACISYVMELFPSKVAKAVFIAAT 243 (394)
Q Consensus 213 lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~ 243 (394)
+|..|+.=..++ |.+||-++++++..
T Consensus 239 lva~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 239 LVASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEEehhhhhhhh-----hhhccceeEEEeCC
Confidence 888888766655 78899999998753
No 250
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=59.41 E-value=80 Score=24.32 Aligned_cols=75 Identities=20% Similarity=0.250 Sum_probs=49.7
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhC-CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKES-GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~-g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
.||..|| .-+......++.+... -..+.++++. ...+++++.+.+.+.++.++..+.+.++.==+||
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~gg 69 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY----------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGG 69 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET----------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTS
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc----------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCC
Confidence 5888999 5555666666666654 2366666643 2357899999999999888755466666655555
Q ss_pred HHHHHHHH
Q 016141 221 ACISYVME 228 (394)
Q Consensus 221 ~~a~~~a~ 228 (394)
...-.++.
T Consensus 70 sp~n~a~~ 77 (116)
T PF03610_consen 70 SPFNEAAR 77 (116)
T ss_dssp HHHHHHHH
T ss_pred ccchHHHH
Confidence 54444443
No 251
>PRK02399 hypothetical protein; Provisional
Probab=58.79 E-value=1.5e+02 Score=28.70 Aligned_cols=97 Identities=20% Similarity=0.200 Sum_probs=60.0
Q ss_pred ceEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCC----------------------CCccCHHHHHHH
Q 016141 141 SHFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDT----------------------NSITSLEQYVKP 197 (394)
Q Consensus 141 ~~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~----------------------~~~~~~~~~~~~ 197 (394)
+.|+++ |...+. ..+..+...+.+.|..|+.+|.-..|....+. +....++.+++-
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~g 82 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEG 82 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHH
Confidence 344444 554544 44666677788889999999984343221110 001112334444
Q ss_pred HHHHHHHh----CCCCcEEEEEeChHHHHHHHHHHhCCcccceEEE
Q 016141 198 LIDTFNEL----GNEEKVILVGHDFGGACISYVMELFPSKVAKAVF 239 (394)
Q Consensus 198 ~~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVl 239 (394)
...++..| .++ -++-+|-|.|..++.......|--+-++++
T Consensus 83 a~~~v~~L~~~g~i~-gviglGGs~GT~lat~aMr~LPiG~PKlmV 127 (406)
T PRK02399 83 AAAFVRELYERGDVA-GVIGLGGSGGTALATPAMRALPIGVPKLMV 127 (406)
T ss_pred HHHHHHHHHhcCCcc-EEEEecCcchHHHHHHHHHhCCCCCCeEEE
Confidence 44455443 355 788899999999999999988876766665
No 252
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=58.34 E-value=12 Score=34.30 Aligned_cols=29 Identities=24% Similarity=0.430 Sum_probs=23.4
Q ss_pred HHHHHHhCCCCcEEEEEeChHHHHHHHHHH
Q 016141 199 IDTFNELGNEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 199 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
..++..+|+. +-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 3456777887 8899999999999987664
No 253
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=57.81 E-value=23 Score=35.22 Aligned_cols=61 Identities=15% Similarity=0.004 Sum_probs=44.4
Q ss_pred CcCEEEEecCCCCCCChHHHHHHH----HhCCC--------ceEEEEcCCCccCccc--ChHHHHHHHHHHHhhh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMI----NSNPP--------ELVFEIKGSDHAPFFS--KPRALHRILVEISKIT 392 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~----~~~~~--------~~~~~i~~agH~~~~e--~p~~v~~~i~~fl~~~ 392 (394)
.-.+++.||..|.++|+.....+. +...+ .+++.+||.+|+.--. .+-.....|.+|+++-
T Consensus 353 GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 353 GGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred CCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 467999999999999876544333 33321 4789999999986544 3456778899998753
No 254
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=57.26 E-value=8.3 Score=36.00 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHH
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
+..+++..|+. +-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 34566777887 8899999999998886664
No 255
>COG3933 Transcriptional antiterminator [Transcription]
Probab=55.78 E-value=76 Score=30.91 Aligned_cols=75 Identities=16% Similarity=0.070 Sum_probs=57.0
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
-.+||+.||. .++.....++..|... =-+.++|.| -..++.+..+.+.+.+++.... +=+++=..||
T Consensus 109 v~vIiiAHG~-sTASSmaevanrLL~~-~~~~aiDMP----------Ldvsp~~vle~l~e~~k~~~~~-~GlllLVDMG 175 (470)
T COG3933 109 VKVIIIAHGY-STASSMAEVANRLLGE-EIFIAIDMP----------LDVSPSDVLEKLKEYLKERDYR-SGLLLLVDMG 175 (470)
T ss_pred eeEEEEecCc-chHHHHHHHHHHHhhc-cceeeecCC----------CcCCHHHHHHHHHHHHHhcCcc-CceEEEEecc
Confidence 3589999997 5566677778777765 468899987 3468899999999999998776 5567777999
Q ss_pred HHHHHHHH
Q 016141 220 GACISYVM 227 (394)
Q Consensus 220 g~~a~~~a 227 (394)
......-.
T Consensus 176 SL~~f~~~ 183 (470)
T COG3933 176 SLTSFGSI 183 (470)
T ss_pred hHHHHHHH
Confidence 98765443
No 256
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=55.75 E-value=1.3e+02 Score=28.02 Aligned_cols=93 Identities=11% Similarity=0.005 Sum_probs=54.3
Q ss_pred CCCCceEEEEcCCCC----ch-hcHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCC---------------CccCHHHHH
Q 016141 137 SPETSHFVLVHGGGF----GA-WCWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTN---------------SITSLEQYV 195 (394)
Q Consensus 137 ~~~~~~vvl~HG~~~----~~-~~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~---------------~~~~~~~~~ 195 (394)
+..+..|+++-|... .. ..--.+...|.. .|-+++++=.+|.|.-..+.. ....+..-+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 344567888877422 11 223344455555 578888888888885432110 011222222
Q ss_pred H-HHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHh
Q 016141 196 K-PLIDTFNELGNEEKVILVGHDFGGACISYVMEL 229 (394)
Q Consensus 196 ~-~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 229 (394)
. ...-++.+....+.|+++|+|-|+++|--+|..
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 2 223344555666799999999999999887764
No 257
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=55.28 E-value=1e+02 Score=26.17 Aligned_cols=60 Identities=13% Similarity=0.018 Sum_probs=39.4
Q ss_pred CCCceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecC--CCCCCCCCCCCCccCHHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDL--TGSGVSSCDTNSITSLEQYVKPLID 200 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~--~G~G~s~~~~~~~~~~~~~~~~~~~ 200 (394)
+.++.||++-|+.++... -..+.+.|.+.|++++..|= --||.+.. -.++-++-.+.+..
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDGDnvR~gL~~d---LgFs~edR~eniRR 83 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDGDNVRHGLNRD---LGFSREDRIENIRR 83 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecChhHhhcccCC---CCCChHHHHHHHHH
Confidence 566899999999776644 35566788899999999983 23444422 23555555554443
No 258
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=53.56 E-value=17 Score=33.43 Aligned_cols=30 Identities=13% Similarity=0.059 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHH
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
+..++...++. +..++|||+|=+.|+.++.
T Consensus 66 l~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 34455667886 8999999999998887664
No 259
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=53.07 E-value=1.2e+02 Score=27.84 Aligned_cols=97 Identities=19% Similarity=0.118 Sum_probs=47.3
Q ss_pred EcCCCCchhcHHHHHHHHHhCCcEEEE------ecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 146 VHGGGFGAWCWYKTMTLLKESGFKVDA------VDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 146 ~HG~~~~~~~~~~~~~~l~~~g~~v~~------~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
+||.-++... ...|...|++|.+ .+++|||...+.......+.++.+++.+. +.++. -..++-|+=-.
T Consensus 11 v~G~vGn~AA----~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~-~~~~~-~davltGYlgs 84 (281)
T COG2240 11 VYGSVGNSAA----IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAI-DKLGE-CDAVLTGYLGS 84 (281)
T ss_pred eecccccHhH----HHHHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhc-ccccc-cCEEEEccCCC
Confidence 3555444332 2345666777654 58999998765432222333333333220 02222 25677776222
Q ss_pred HH----HHHHHHHhCCcccceEEEeecccCCCC
Q 016141 220 GA----CISYVMELFPSKVAKAVFIAATMLTSG 248 (394)
Q Consensus 220 g~----~a~~~a~~~p~~v~~lVli~~~~~~~~ 248 (394)
+. ++-.+.+-....-+.+++++|.+...+
T Consensus 85 ~~qv~~i~~~v~~vk~~~P~~~~l~DPVMGD~g 117 (281)
T COG2240 85 AEQVRAIAGIVKAVKEANPNALYLCDPVMGDPG 117 (281)
T ss_pred HHHHHHHHHHHHHHhccCCCeEEEeCCcccCCC
Confidence 22 222222211223447799999876554
No 260
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=49.80 E-value=1.5e+02 Score=28.83 Aligned_cols=74 Identities=11% Similarity=0.151 Sum_probs=42.9
Q ss_pred CceEEEEcCCCCc---hhcHHHHHHHHHhCCcEEEEecCCCC---CCCCCCCCCccCHHHHHHHHHHHHHHhCCC-CcEE
Q 016141 140 TSHFVLVHGGGFG---AWCWYKTMTLLKESGFKVDAVDLTGS---GVSSCDTNSITSLEQYVKPLIDTFNELGNE-EKVI 212 (394)
Q Consensus 140 ~~~vvl~HG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~ 212 (394)
+.+||+++-.... .......+..|.+.|+.|+-++ +|+ |... .+...++++++..+...+....+. .++.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~-~g~la~~~~g--~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPA-SGRLACGDVG--PGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCC-CccccCCCcC--CCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 4466777654222 1224566778888899888554 333 2221 224567888888888777543332 2566
Q ss_pred EEEe
Q 016141 213 LVGH 216 (394)
Q Consensus 213 lvGh 216 (394)
+.|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6665
No 261
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=49.77 E-value=20 Score=32.78 Aligned_cols=28 Identities=18% Similarity=0.186 Sum_probs=22.1
Q ss_pred HHHHHhC-CCCcEEEEEeChHHHHHHHHHH
Q 016141 200 DTFNELG-NEEKVILVGHDFGGACISYVME 228 (394)
Q Consensus 200 ~~l~~l~-~~~~~~lvGhS~Gg~~a~~~a~ 228 (394)
.++...+ +. +..++|||+|=+.|+.++.
T Consensus 74 ~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLK-PDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCC-CCEEeecCHHHHHHHHHhC
Confidence 4455566 77 8899999999998887764
No 262
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=45.42 E-value=1.7e+02 Score=28.23 Aligned_cols=95 Identities=17% Similarity=0.155 Sum_probs=53.9
Q ss_pred ceEEEEcCCCCch---hcHHHHHHHHHhCCcEEEEecCCCC--CCCCCCCCCccCHHHHHHHHHHHHHH---hCCCCcEE
Q 016141 141 SHFVLVHGGGFGA---WCWYKTMTLLKESGFKVDAVDLTGS--GVSSCDTNSITSLEQYVKPLIDTFNE---LGNEEKVI 212 (394)
Q Consensus 141 ~~vvl~HG~~~~~---~~~~~~~~~l~~~g~~v~~~d~~G~--G~s~~~~~~~~~~~~~~~~~~~~l~~---l~~~~~~~ 212 (394)
.+||+++-..... ......+..|.+.|+.|+-+..--+ |... .....+++++++.+...+.. +.- .++.
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~G~~vv~P~~g~~ac~~~g--~g~~~~~~~i~~~v~~~~~~~~~~~~-~~vl 189 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDDGYIFIEPDSGLLACGDEG--KGRLAEPETIVKAAEREFSPKEDLEG-KRVL 189 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHCCcEEECCCCccccccccc--CCCCCCHHHHHHHHHHHHhhccccCC-ceEE
Confidence 4666666643322 2446667788888888766653211 2221 22456788888888877754 322 2555
Q ss_pred EEEe---------------C---hHHHHHHHHHHhCCcccceEEEeec
Q 016141 213 LVGH---------------D---FGGACISYVMELFPSKVAKAVFIAA 242 (394)
Q Consensus 213 lvGh---------------S---~Gg~~a~~~a~~~p~~v~~lVli~~ 242 (394)
+.|- | +|..+|..++.+- ..++++..
T Consensus 190 it~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G----a~V~~~~g 233 (390)
T TIGR00521 190 ITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG----ADVTLITG 233 (390)
T ss_pred EecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC----CEEEEeCC
Confidence 6565 3 5566666666532 34455554
No 263
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=45.30 E-value=1.4e+02 Score=23.13 Aligned_cols=71 Identities=20% Similarity=0.260 Sum_probs=47.0
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
.||..|| .-+......++.+....-.+.+++.. ...+.+++.+.+.++++..+..+.++++-==+||.
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~~~i~~~~~~----------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGS 70 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQENVEAIDFP----------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGS 70 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCCCCeEEEEeC----------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCC
Confidence 5888899 44555666666665432466677653 23578889999999999886544666665555777
Q ss_pred HHH
Q 016141 222 CIS 224 (394)
Q Consensus 222 ~a~ 224 (394)
..-
T Consensus 71 p~n 73 (122)
T cd00006 71 PNN 73 (122)
T ss_pred HHH
Confidence 544
No 264
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=44.94 E-value=93 Score=25.05 Aligned_cols=88 Identities=14% Similarity=0.018 Sum_probs=45.3
Q ss_pred CCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCC------------CCCccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 148 GGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCD------------TNSITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 148 G~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~------------~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
+.||.......++..|.+.|+.|..+-...-+..... .......-.....+..+++..+.+ ++..
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D---iVh~ 86 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEELVKIFVKIPYPIRKRFLRSFFFMRRLRRLIKKEKPD---IVHI 86 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SSTEEEE---TT-SSTSS--HHHHHHHHHHHHHHHHT-S---EEEC
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhhccceeeeeecccccccchhHHHHHHHHHHHHHcCCC---eEEe
Confidence 4456666778899999999999988854433322211 001111122334556667666655 4456
Q ss_pred eChHHHHHHHHHHhCCcccceEEEee
Q 016141 216 HDFGGACISYVMELFPSKVAKAVFIA 241 (394)
Q Consensus 216 hS~Gg~~a~~~a~~~p~~v~~lVli~ 241 (394)
|..........+.. .+..++.+-
T Consensus 87 ~~~~~~~~~~~~~~---~~~~v~~~H 109 (177)
T PF13439_consen 87 HGPPAFWIALLACR---KVPIVYTIH 109 (177)
T ss_dssp CTTHCCCHHHHHHH---CSCEEEEE-
T ss_pred cccchhHHHHHhcc---CCCEEEEeC
Confidence 66665544444443 344444443
No 265
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=44.91 E-value=1.4e+02 Score=28.49 Aligned_cols=37 Identities=14% Similarity=0.064 Sum_probs=28.9
Q ss_pred EEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCC
Q 016141 143 FVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVS 181 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s 181 (394)
|||+|.... ..|..+++.|.+.|+.|.++-..+.+..
T Consensus 2 il~~~~~~p--~~~~~la~~L~~~G~~v~~~~~~~~~~~ 38 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAAQGHEVVFLTEPNAAPP 38 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHHCCCEEEEEecCCCCCC
Confidence 789988643 4488999999999999988876665543
No 266
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=44.80 E-value=23 Score=30.21 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=25.6
Q ss_pred ceEEEEcC---CCCchhcHHHHHHHHHhCCcEEEEec
Q 016141 141 SHFVLVHG---GGFGAWCWYKTMTLLKESGFKVDAVD 174 (394)
Q Consensus 141 ~~vvl~HG---~~~~~~~~~~~~~~l~~~g~~v~~~d 174 (394)
..||++|. ...+......+++.|.++||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 46999994 23344567788899999999998774
No 267
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=43.07 E-value=1.6e+02 Score=25.26 Aligned_cols=75 Identities=15% Similarity=0.156 Sum_probs=48.4
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCc--c
Q 016141 156 WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPS--K 233 (394)
Q Consensus 156 ~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~ 233 (394)
.....+.+.++++.++.+|-+|... .-.+..+++..+++..... .++||--+..+.-.+..+..+-+ .
T Consensus 72 ~~~~l~~~~~~~~D~vlIDT~Gr~~---------~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~~~~ 141 (196)
T PF00448_consen 72 AREALEKFRKKGYDLVLIDTAGRSP---------RDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYEAFG 141 (196)
T ss_dssp HHHHHHHHHHTTSSEEEEEE-SSSS---------THHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCCEEEEecCCcch---------hhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhhccc
Confidence 3444556666789999999987552 2355666777788877666 77777666666656554443322 3
Q ss_pred cceEEEe
Q 016141 234 VAKAVFI 240 (394)
Q Consensus 234 v~~lVli 240 (394)
+.++|+-
T Consensus 142 ~~~lIlT 148 (196)
T PF00448_consen 142 IDGLILT 148 (196)
T ss_dssp TCEEEEE
T ss_pred CceEEEE
Confidence 7888863
No 268
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=43.07 E-value=1.9e+02 Score=23.75 Aligned_cols=78 Identities=21% Similarity=0.197 Sum_probs=48.7
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCc-EEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeC-h
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGF-KVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHD-F 218 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS-~ 218 (394)
..++++=| .....-..+...|...|. +|+.++.+.. ..++.+.+++.+.+++++.+. .++|+|++ .
T Consensus 34 ~v~av~~G--~~~~~~~~l~~~l~~~G~d~v~~~~~~~~--------~~~~~~~~a~~l~~~~~~~~~--~lVl~~~t~~ 101 (164)
T PF01012_consen 34 EVTAVVLG--PAEEAAEALRKALAKYGADKVYHIDDPAL--------AEYDPEAYADALAELIKEEGP--DLVLFGSTSF 101 (164)
T ss_dssp EEEEEEEE--TCCCHHHHHHHHHHSTTESEEEEEE-GGG--------TTC-HHHHHHHHHHHHHHHT---SEEEEESSHH
T ss_pred eEEEEEEe--cchhhHHHHhhhhhhcCCcEEEEecCccc--------cccCHHHHHHHHHHHHHhcCC--CEEEEcCcCC
Confidence 45555555 112222233345665676 6888875432 235788999999999999774 58899987 5
Q ss_pred HHHHHHHHHHhC
Q 016141 219 GGACISYVMELF 230 (394)
Q Consensus 219 Gg~~a~~~a~~~ 230 (394)
|.-++..+|.+.
T Consensus 102 g~~la~~lA~~L 113 (164)
T PF01012_consen 102 GRDLAPRLAARL 113 (164)
T ss_dssp HHHHHHHHHHHH
T ss_pred CCcHHHHHHHHh
Confidence 556888887753
No 269
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=42.34 E-value=40 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=25.2
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
+.+.+++.++. .-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPL-IDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCC
Confidence 44455555766 6789999999999999998543
No 270
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=42.01 E-value=1.7e+02 Score=25.66 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=38.7
Q ss_pred CCCceEEEEcCCCCchhcH-HHHHHHHHhCCc-EEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCW-YKTMTLLKESGF-KVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~-~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
.+.-+|++.||...++... ..+-..|.++|| .|++-..-|+- . ++++...++..++. .+.|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP----------~----~d~vi~~l~~~~~~-~v~L~ 199 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP----------L----VDTVIEYLRKNGIK-EVHLI 199 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC----------c----HHHHHHHHHHcCCc-eEEEe
Confidence 3445888999998777654 444456677788 56655443322 1 34556666777776 66665
No 271
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=41.64 E-value=59 Score=27.93 Aligned_cols=61 Identities=15% Similarity=0.284 Sum_probs=36.9
Q ss_pred CCceEEEEcCCCCchhc---HHHHHHHHHhCCcEEEEecCC--CCCCCCCCCCCccCHHHHHHHHHHHHHH
Q 016141 139 ETSHFVLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLT--GSGVSSCDTNSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~--G~G~s~~~~~~~~~~~~~~~~~~~~l~~ 204 (394)
..++|+++||.....-. -..+...|.+.|..+...-++ |||... .....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~-----~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGN-----PENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTS-----HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCC-----chhHHHHHHHHHHHHHH
Confidence 56899999997655332 345677888877665555555 554331 12233555666666654
No 272
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=41.25 E-value=82 Score=26.31 Aligned_cols=63 Identities=16% Similarity=0.282 Sum_probs=45.0
Q ss_pred CCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC------CccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 150 GFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN------SITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 150 ~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~------~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
.-+...|...+..+.+-|++.+++-.-|++....-+. ......+.++.+.+..++.|++ +.+|
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmk---v~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMK---VFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCE---EEEe
Confidence 3456779999999999999999888888876542221 1224467777888888888876 4555
No 273
>PRK09936 hypothetical protein; Provisional
Probab=41.19 E-value=87 Score=28.71 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=41.0
Q ss_pred chhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 152 GAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 152 ~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
+...|..+...+...|++.+++.+-++|.++... -+-+...+.+.....|++ +.||
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~~fg~-----~~g~La~~l~~A~~~Gl~---v~vG 91 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDADFGG-----QRGWLAKRLAAAQQAGLK---LVVG 91 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCCCccc-----chHHHHHHHHHHHHcCCE---EEEc
Confidence 3567999999999999999999999999884332 255555555666666665 4454
No 274
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=41.18 E-value=39 Score=31.40 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 197 PLIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 197 ~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
-+...+++.++. .-.++|-|+|+.++..+|...
T Consensus 32 GvL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIP-VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 355666666776 668999999999999999864
No 275
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=41.15 E-value=1.2e+02 Score=26.51 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=28.4
Q ss_pred CCceEEEEcCCCCchhc--H-HHHHHHHHhCCcEEEEecC
Q 016141 139 ETSHFVLVHGGGFGAWC--W-YKTMTLLKESGFKVDAVDL 175 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~--~-~~~~~~l~~~g~~v~~~d~ 175 (394)
.++.|.|++-.+.+... | ......|.+.|+.+.-+++
T Consensus 31 ~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 31 KRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 36799999988776655 3 4566788999999888875
No 276
>PHA02114 hypothetical protein
Probab=40.82 E-value=41 Score=25.11 Aligned_cols=34 Identities=29% Similarity=0.411 Sum_probs=29.2
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEec
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVD 174 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 174 (394)
.+||+=-.+..+..-|-.++..|.+.||+|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEAGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhcCceeeehh
Confidence 4777777788888999999999999999999853
No 277
>PRK10279 hypothetical protein; Provisional
Probab=40.59 E-value=39 Score=31.35 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
+.+.+++.++. .-.++|-|+|+.++..+|...
T Consensus 23 VL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 23 VINALKKVGIE-IDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCC
Confidence 44556666776 678999999999999998754
No 278
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=40.39 E-value=38 Score=29.81 Aligned_cols=35 Identities=26% Similarity=0.322 Sum_probs=28.0
Q ss_pred CceEEEEcCC-CCchhcHHHHHHHHHhCCcEEEEec
Q 016141 140 TSHFVLVHGG-GFGAWCWYKTMTLLKESGFKVDAVD 174 (394)
Q Consensus 140 ~~~vvl~HG~-~~~~~~~~~~~~~l~~~g~~v~~~d 174 (394)
...||++|.. ..+......+++.|.++||+++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 3479999974 4456678889999999999998775
No 279
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=40.11 E-value=2e+02 Score=27.52 Aligned_cols=100 Identities=18% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCc-EEEEecC-------CCCCCCCCCCCCccCHHHHHHHHHH------HHH
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGF-KVDAVDL-------TGSGVSSCDTNSITSLEQYVKPLID------TFN 203 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~-~v~~~d~-------~G~G~s~~~~~~~~~~~~~~~~~~~------~l~ 203 (394)
.+.+.||++++...+. ..+..|...|| +|+.++- .|.-............+.+.+.+.- -.+
T Consensus 56 ~~~~IvvyC~~G~rs~----~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~s~~~~~~y~r~i~l~~~g~~~q~ 131 (376)
T PRK08762 56 RDREIVLICASGTRSA----HAAATLRELGYTRVASVAGGFSAWKDAGLPLERPRLLTDEQDERYSRHLRLPEVGEEGQR 131 (376)
T ss_pred CCCeEEEEcCCCcHHH----HHHHHHHHcCCCceEeecCcHHHHHhcCCccccccCCCHHHHHHHHHhcchhhcCHHHHH
Confidence 4567777777632221 23456777898 4776541 1111010000011122333333210 122
Q ss_pred HhCCCCcEEEEEeC-hHHHHHHHHHHhCCcccceEEEeecccC
Q 016141 204 ELGNEEKVILVGHD-FGGACISYVMELFPSKVAKAVFIAATML 245 (394)
Q Consensus 204 ~l~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~v~~lVli~~~~~ 245 (394)
.+.-. +|.|+|-. .|+.++..++.. -|..+++++.-..
T Consensus 132 ~l~~~-~VlvvG~GG~Gs~ia~~La~~---Gvg~i~lvD~d~v 170 (376)
T PRK08762 132 RLLEA-RVLLIGAGGLGSPAALYLAAA---GVGTLGIVDHDVV 170 (376)
T ss_pred HHhcC-cEEEECCCHHHHHHHHHHHHc---CCCeEEEEeCCEe
Confidence 34333 89999986 666677777653 3788999987643
No 280
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=38.85 E-value=37 Score=30.91 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=28.6
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEec
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVD 174 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d 174 (394)
..||++|-...+......+++.|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 4689999876677778889999999999998764
No 281
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=38.22 E-value=48 Score=28.08 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
+.+.+++.++. .=.++|-|.||.+|..++...
T Consensus 17 vl~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGIL-KKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCC-cceEEEECHHHHHHHHHHcCC
Confidence 33444555665 568999999999999998743
No 282
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=37.29 E-value=39 Score=34.12 Aligned_cols=31 Identities=13% Similarity=0.207 Sum_probs=24.5
Q ss_pred HHHH-HHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 199 IDTF-NELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 199 ~~~l-~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
.+++ +..|+. +-.++|||+|=+.|+..|.-.
T Consensus 255 a~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 3445 577887 889999999999998887643
No 283
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=36.87 E-value=3.3e+02 Score=25.62 Aligned_cols=78 Identities=17% Similarity=0.026 Sum_probs=45.3
Q ss_pred EEEEcCCCCchhcHHHHHHHHHhCC--cEEEEecCCCCCCCC---------------CCCCCccCHHHHHHHHHHHHHHh
Q 016141 143 FVLVHGGGFGAWCWYKTMTLLKESG--FKVDAVDLTGSGVSS---------------CDTNSITSLEQYVKPLIDTFNEL 205 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~---------------~~~~~~~~~~~~~~~~~~~l~~l 205 (394)
=|+++|+|+-......++..+.... +.|++++ |+-.+- ..........+.++.+...++..
T Consensus 56 nlL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvn--Gy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~ 133 (326)
T PF04084_consen 56 NLLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVN--GYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESR 133 (326)
T ss_pred eEEEEecChHHHHHHHHHHHHhhccCCCcEEEEE--ccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhcc
Confidence 3567777777777777776655542 4566665 221110 00112335566666666666666
Q ss_pred CCCCcEEEEEeChHHHH
Q 016141 206 GNEEKVILVGHDFGGAC 222 (394)
Q Consensus 206 ~~~~~~~lvGhS~Gg~~ 222 (394)
....+++||=|+.=|..
T Consensus 134 ~~~~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 134 PSPPPLYLVIHNIDGPS 150 (326)
T ss_pred CCCCceEEEEECCCChh
Confidence 42348999999987665
No 284
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=36.57 E-value=1.7e+02 Score=28.59 Aligned_cols=69 Identities=19% Similarity=0.235 Sum_probs=48.0
Q ss_pred HHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCcc--cceEEE
Q 016141 162 LLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSK--VAKAVF 239 (394)
Q Consensus 162 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~lVl 239 (394)
.+.+.+|.|+.+|-.|.- .--+++.+.+.++-+.++++ .+.+|--+|=|.-|...|..+-+. +.++|+
T Consensus 177 ~ak~~~~DvvIvDTAGRl---------~ide~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~l~itGvIl 246 (451)
T COG0541 177 KAKEEGYDVVIVDTAGRL---------HIDEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEALGITGVIL 246 (451)
T ss_pred HHHHcCCCEEEEeCCCcc---------cccHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhhcCCceEEE
Confidence 333445566666644321 22356677778888888887 899999999999999988877654 778887
Q ss_pred e
Q 016141 240 I 240 (394)
Q Consensus 240 i 240 (394)
.
T Consensus 247 T 247 (451)
T COG0541 247 T 247 (451)
T ss_pred E
Confidence 3
No 285
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=36.36 E-value=47 Score=30.77 Aligned_cols=32 Identities=13% Similarity=0.229 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
+.+.|++.++. .-.+.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGIP-IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCCC-ccEEEecCHHHHHHHHHHcCC
Confidence 44555666666 778999999999999999854
No 286
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.15 E-value=65 Score=29.43 Aligned_cols=50 Identities=14% Similarity=0.316 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCC--CcEEEEEeChHHHHHHHHHH---hCCcccceEEEeecccC
Q 016141 196 KPLIDTFNELGNE--EKVILVGHDFGGACISYVME---LFPSKVAKAVFIAATML 245 (394)
Q Consensus 196 ~~~~~~l~~l~~~--~~~~lvGhS~Gg~~a~~~a~---~~p~~v~~lVli~~~~~ 245 (394)
+.|...++.+-.+ .+++|.|.|+|++-+..... ..-+++.+.++.+++..
T Consensus 94 ~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 94 EAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 3344444444221 38999999999986655432 23456999999998764
No 287
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=35.82 E-value=3.9 Score=36.99 Aligned_cols=103 Identities=12% Similarity=-0.118 Sum_probs=60.1
Q ss_pred CCceEEEEcCCCCchhcHHHHH-HHHHhCCcEEEEecCCCCCCCCCCCCC---ccCHHHHHHHHHHHHHHhCCCCcEEEE
Q 016141 139 ETSHFVLVHGGGFGAWCWYKTM-TLLKESGFKVDAVDLTGSGVSSCDTNS---ITSLEQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~~~~~~~~-~~l~~~g~~v~~~d~~G~G~s~~~~~~---~~~~~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
.+..++..||...+......+. ..+...++.++..|+++++.+...... ..+.......+......+... +++++
T Consensus 87 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (299)
T COG1073 87 FGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDAS-RIVVW 165 (299)
T ss_pred ccccccccccccCccccccccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhh-cccce
Confidence 4567888999866555443333 445555789999999999988643321 112222222222222122233 88999
Q ss_pred EeChHHHHHHHHHHh----CCcccceEEEeec
Q 016141 215 GHDFGGACISYVMEL----FPSKVAKAVFIAA 242 (394)
Q Consensus 215 GhS~Gg~~a~~~a~~----~p~~v~~lVli~~ 242 (394)
|.|+||..++..... .++.+..++.-++
T Consensus 166 g~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (299)
T COG1073 166 GESLGGALALLLLGANPELARELIDYLITPGG 197 (299)
T ss_pred eeccCceeeccccccchHHHHhhhhhhccCCC
Confidence 999999988876543 2334444444443
No 288
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=35.50 E-value=61 Score=28.44 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=23.2
Q ss_pred HHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 199 IDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 199 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
.+.+++.+++ .-.++|-|.|+.+|..+|...
T Consensus 19 L~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 3444455665 568999999999999998744
No 289
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=35.10 E-value=55 Score=29.80 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
+.+.+++.++. -=.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIP-IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCC-ccEEEEECHHHHHHHHHHcCC
Confidence 44555666776 568999999999999999753
No 290
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=34.62 E-value=2.2e+02 Score=27.00 Aligned_cols=78 Identities=12% Similarity=0.046 Sum_probs=48.6
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
-+++++|+..+.+....+++.+...+..|=.+.+--.|.+... ..+ ++..+.+.+++...|+. +.+..|.|-=
T Consensus 259 ey~LIpGvNDs~e~a~~La~~l~~l~~~VnLIPynp~~~~~~~---~ps-~e~i~~f~~~L~~~Gi~---vtvR~~~G~d 331 (345)
T PRK14457 259 EYILLGGVNDLPEHAEELANLLRGFQSHVNLIPYNPIDEVEFQ---RPS-PKRIQAFQRVLEQRGVA---VSVRASRGLD 331 (345)
T ss_pred EEEEECCcCCCHHHHHHHHHHHhcCCCeEEEecCCCCCCCCCC---CCC-HHHHHHHHHHHHHCCCe---EEEeCCCCCc
Confidence 4789999999999998888888764333333322112333221 123 33445566677777765 6789999976
Q ss_pred HHHHH
Q 016141 222 CISYV 226 (394)
Q Consensus 222 ~a~~~ 226 (394)
+....
T Consensus 332 i~aaC 336 (345)
T PRK14457 332 ANAAC 336 (345)
T ss_pred hhhcc
Confidence 65543
No 291
>PF10489 RFPL3_antisense: Ret finger protein-like 3 antisense; InterPro: IPR019524 This short transcript is purported to be the antisense protein of exon 2 of the ret-finger protein-like 3 (RFPL3) gene, however this was not confirmed. Since RFPL3 is expressed in testis, the suggestion is that it may have a role in the antisense regulation of the RFPL genes. RFPL transcripts encode proteins with tripartite structure of RING finger, coiled-coil, and B30-2 domains, which are characteristic of the RING-B30 family. Each of these domains is thought to mediate protein-protein interactions by promoting homo- or heterodimerisation [].
Probab=33.50 E-value=20 Score=26.80 Aligned_cols=16 Identities=38% Similarity=0.908 Sum_probs=12.6
Q ss_pred CCCcccccccCCCCCC
Q 016141 1 MGNAVGCVSAGVKAPK 16 (394)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (394)
|||+.+||...-+.|+
T Consensus 1 mG~~~g~iKgDskkpS 16 (124)
T PF10489_consen 1 MGSPAGCIKGDSKKPS 16 (124)
T ss_pred CCCccccccccccCch
Confidence 8999999997545554
No 292
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=33.49 E-value=2.5e+02 Score=24.07 Aligned_cols=90 Identities=12% Similarity=0.165 Sum_probs=49.5
Q ss_pred CceEEEEcCCCCchhc------HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEE
Q 016141 140 TSHFVLVHGGGFGAWC------WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVIL 213 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~------~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l 213 (394)
+++|||.|....+..+ +..+.+.+.+.|..|+++..- ...+...+.+++..... .++ ++-+
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D----------~~~~~~~~~~~i~~~~~-~~~--~fpi 92 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVD----------SVESHIKWIEDIEEYTG-VEI--PFPI 92 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECC----------CHHHHHHHHhhHHHhcC-CCC--ceeE
Confidence 4567777766555443 345566777789999888521 12344445555555443 333 3333
Q ss_pred EEeChHHHHHHHHHHhC-----CcccceEEEeecc
Q 016141 214 VGHDFGGACISYVMELF-----PSKVAKAVFIAAT 243 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~-----p~~v~~lVli~~~ 243 (394)
+ ....+.++-.+.... |.-+.+.++|++-
T Consensus 93 l-~D~~~~ia~~yg~~~~~~~~~~~~r~~fiID~~ 126 (203)
T cd03016 93 I-ADPDREVAKLLGMIDPDAGSTLTVRAVFIIDPD 126 (203)
T ss_pred E-ECchHHHHHHcCCccccCCCCceeeEEEEECCC
Confidence 3 345566665554332 2235667787764
No 293
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=32.47 E-value=3.2e+02 Score=25.50 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=25.8
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCC
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLT 176 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 176 (394)
.+|...|.|++-..+..++..|.+.||.|..+-..
T Consensus 4 i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~ 38 (357)
T PRK00726 4 ILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTA 38 (357)
T ss_pred EEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECC
Confidence 34444667777776778999999999998776443
No 294
>PRK14974 cell division protein FtsY; Provisional
Probab=32.05 E-value=3e+02 Score=25.99 Aligned_cols=69 Identities=17% Similarity=0.190 Sum_probs=44.0
Q ss_pred HHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC--cccceEEE
Q 016141 162 LLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFP--SKVAKAVF 239 (394)
Q Consensus 162 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~lVl 239 (394)
.....|+.++.+|-.|.... -..+.+.+..+.+..+.+ .+++|.-+.-|.-++..+..+. -.+.++|+
T Consensus 217 ~~~~~~~DvVLIDTaGr~~~---------~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 217 HAKARGIDVVLIDTAGRMHT---------DANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HHHhCCCCEEEEECCCccCC---------cHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 33445789999998875532 234455666666666666 6777777777766666565442 24677776
Q ss_pred e
Q 016141 240 I 240 (394)
Q Consensus 240 i 240 (394)
.
T Consensus 287 T 287 (336)
T PRK14974 287 T 287 (336)
T ss_pred e
Confidence 4
No 295
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=31.57 E-value=2.2e+02 Score=24.30 Aligned_cols=62 Identities=19% Similarity=0.106 Sum_probs=38.2
Q ss_pred CceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHH-HHHHHhCCC
Q 016141 140 TSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI-DTFNELGNE 208 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~l~~l~~~ 208 (394)
+.++++++-.......-...+..|.+.|+.|+-+.. |+- ....+++++++.+. .+++.+|++
T Consensus 115 ~~pvii~P~~M~~~p~~~~Nl~~L~~~G~~vi~P~~-g~~------a~p~~~~~~~~~~v~~~~~~l~~~ 177 (185)
T PRK06029 115 RRRLVLCVRETPLHLGHLRNMTKLAEMGAIIMPPVP-AFY------HRPQTLEDMVDQTVGRVLDLFGIE 177 (185)
T ss_pred CCCEEEEeccccCCHHHHHHHHHHHHCcCEEECCCc-ccc------cCCCCHHHHHHHHHHHHHHhcCCC
Confidence 345555552211112224566788888988887764 321 23468899988664 688999876
No 296
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=31.42 E-value=62 Score=35.76 Aligned_cols=24 Identities=33% Similarity=0.461 Sum_probs=19.0
Q ss_pred HHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 197 PLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 197 ~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
.+.+++..+|+. +=.|||||.|-.
T Consensus 571 aLtDlLs~lgi~-PDGIvGHS~GEl 594 (2376)
T KOG1202|consen 571 ALTDLLSCLGIR-PDGIVGHSLGEL 594 (2376)
T ss_pred HHHHHHHhcCCC-CCcccccccchh
Confidence 456677788887 889999998843
No 297
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=31.40 E-value=4.1e+02 Score=24.30 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=24.2
Q ss_pred EEEEcCC--CCchhcHHHHHHHHHhCCcEEEEecCCC
Q 016141 143 FVLVHGG--GFGAWCWYKTMTLLKESGFKVDAVDLTG 177 (394)
Q Consensus 143 vvl~HG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G 177 (394)
+++++|. |+.......+++.|.+.|+.|..+...+
T Consensus 3 l~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 3 LYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred EEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 4555554 4445556788899998899988776544
No 298
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=31.40 E-value=1.8e+02 Score=24.02 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=25.7
Q ss_pred CceEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEec
Q 016141 140 TSHFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVD 174 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d 174 (394)
++.||++-|..++... -..+...|.+.|+.|+.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEec
Confidence 3689999999777654 3556678888899999997
No 299
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=31.17 E-value=3e+02 Score=25.28 Aligned_cols=58 Identities=17% Similarity=0.190 Sum_probs=30.1
Q ss_pred HHHHHHHHhCCcE--EEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHH
Q 016141 157 YKTMTLLKESGFK--VDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACI 223 (394)
Q Consensus 157 ~~~~~~l~~~g~~--v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a 223 (394)
...+..+.+.|+. =|++|. |.|..... ..++ +..+.+.. +..++ ..+++|+|-=.++.
T Consensus 166 ~~~i~~a~~~GI~~~~IilDP-GiGF~k~~---~~n~-~ll~~l~~-l~~lg---~Pilvg~SRKsfig 225 (282)
T PRK11613 166 IEQIARCEAAGIAKEKLLLDP-GFGFGKNL---SHNY-QLLARLAE-FHHFN---LPLLVGMSRKSMIG 225 (282)
T ss_pred HHHHHHHHHcCCChhhEEEeC-CCCcCCCH---HHHH-HHHHHHHH-HHhCC---CCEEEEecccHHHH
Confidence 3445566677885 778885 77754211 1111 11222222 23444 44899999555443
No 300
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=30.68 E-value=74 Score=27.72 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
+.+.|.+.++. .-.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 34445555664 5589999999999999998664
No 301
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=30.37 E-value=76 Score=30.71 Aligned_cols=57 Identities=11% Similarity=0.070 Sum_probs=38.7
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcCCCccCcccC-----hHHHHHHHHHHHh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKGSDHAPFFSK-----PRALHRILVEISK 390 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~agH~~~~e~-----p~~v~~~i~~fl~ 390 (394)
.-.+|+|+|++|++.-... .+.+...+..+.+.||++|...+.. .++....|.+|..
T Consensus 351 ~~rmlFVYG~nDPW~A~~f--~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 351 GPRMLFVYGENDPWSAEPF--RLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred CCeEEEEeCCCCCcccCcc--ccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 3568999999999863221 1222234678889999999866543 3556677777764
No 302
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=29.68 E-value=1.1e+02 Score=31.78 Aligned_cols=79 Identities=13% Similarity=0.142 Sum_probs=50.0
Q ss_pred CCCceEEEEcCCCCc----------hhcHHHHHHHHHhCCcEEEEecCC-C--CCCCCCCC-C----CccCHHHHHHHHH
Q 016141 138 PETSHFVLVHGGGFG----------AWCWYKTMTLLKESGFKVDAVDLT-G--SGVSSCDT-N----SITSLEQYVKPLI 199 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~----------~~~~~~~~~~l~~~g~~v~~~d~~-G--~G~s~~~~-~----~~~~~~~~~~~~~ 199 (394)
..+-+||+.|..... ...|...+..|.++||+++.+|-. . .|....+. . ......+....+.
T Consensus 46 ~~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~Al 125 (672)
T PRK14581 46 KNTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDNGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVY 125 (672)
T ss_pred CCceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHCcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHH
Confidence 344578888887433 345888999999999999998732 1 12111111 1 1122334667778
Q ss_pred HHHHHhCCCCcEEEEEe
Q 016141 200 DTFNELGNEEKVILVGH 216 (394)
Q Consensus 200 ~~l~~l~~~~~~~lvGh 216 (394)
.+|++.+.+.-++++|.
T Consensus 126 PILKkyg~pATfFvVg~ 142 (672)
T PRK14581 126 PLLKAYKWSAVLAPVGT 142 (672)
T ss_pred HHHHHcCCCEEEEEech
Confidence 89999998756667764
No 303
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=29.25 E-value=1.5e+02 Score=27.05 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=47.5
Q ss_pred eEEEEcCCCCchhc-HHHHHHHHHhCCc-------EEEEecCCCCCCCCCCCCCccCHHHHH--------HHHHHHHHHh
Q 016141 142 HFVLVHGGGFGAWC-WYKTMTLLKESGF-------KVDAVDLTGSGVSSCDTNSITSLEQYV--------KPLIDTFNEL 205 (394)
Q Consensus 142 ~vvl~HG~~~~~~~-~~~~~~~l~~~g~-------~v~~~d~~G~G~s~~~~~~~~~~~~~~--------~~~~~~l~~l 205 (394)
.-|++.|.|...-. -+.+...+.+.|. +++.+|..|-=..+... -......++ .++.++++.+
T Consensus 26 ~~iv~~GAGsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~-l~~~~~~~a~~~~~~~~~~L~e~i~~v 104 (279)
T cd05312 26 QRILFLGAGSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKD-LTPFKKPFARKDEEKEGKSLLEVVKAV 104 (279)
T ss_pred cEEEEECcCHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCc-chHHHHHHHhhcCcccCCCHHHHHHhc
Confidence 34555676655544 4455566666677 89999998864433221 011112222 2566677766
Q ss_pred CCCCcEEEEEeCh-HHHHHHHHH
Q 016141 206 GNEEKVILVGHDF-GGACISYVM 227 (394)
Q Consensus 206 ~~~~~~~lvGhS~-Gg~~a~~~a 227 (394)
+.+ +|+|-|- ||.+.-...
T Consensus 105 ~pt---vlIG~S~~~g~ft~evv 124 (279)
T cd05312 105 KPT---VLIGLSGVGGAFTEEVV 124 (279)
T ss_pred CCC---EEEEeCCCCCCCCHHHH
Confidence 655 9999995 676544433
No 304
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=29.09 E-value=83 Score=26.30 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=22.8
Q ss_pred HHHHHhCCCCcEEEEEeChHHHHHHHHHHhCC
Q 016141 200 DTFNELGNEEKVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 200 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
..+++.++. .=.++|-|.|+.+|..++....
T Consensus 20 ~~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIE-IDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCC-eeEEEEeCHHHHHHHHHHcCCC
Confidence 334445554 5589999999999999887544
No 305
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=28.98 E-value=37 Score=28.12 Aligned_cols=49 Identities=20% Similarity=0.261 Sum_probs=27.7
Q ss_pred ecCCCCCCCCCCC--CCccCHHHHHHHH----HHHHHHhCC---CCcEEEEEeChHHH
Q 016141 173 VDLTGSGVSSCDT--NSITSLEQYVKPL----IDTFNELGN---EEKVILVGHDFGGA 221 (394)
Q Consensus 173 ~d~~G~G~s~~~~--~~~~~~~~~~~~~----~~~l~~l~~---~~~~~lvGhS~Gg~ 221 (394)
+-+-|||...... -..++.++++.-+ ..+.+..+. +++|.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3445777662211 1457788888888 444444432 14899999999887
No 306
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=28.92 E-value=53 Score=33.33 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=27.0
Q ss_pred EEEEEeChHHHHHHHHHHhCC-cccceEEEeecccC
Q 016141 211 VILVGHDFGGACISYVMELFP-SKVAKAVFIAATML 245 (394)
Q Consensus 211 ~~lvGhS~Gg~~a~~~a~~~p-~~v~~lVli~~~~~ 245 (394)
|+--+.|-||..++..|.+.. ..|++++...|...
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 455578999999999998654 46899998877653
No 307
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.42 E-value=3.2e+02 Score=24.56 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=33.2
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS 178 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~ 178 (394)
..+.+|++--|...+.+.|...++.+.+.|-.=+++=.||.
T Consensus 120 ~tgkPVilk~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~ 160 (250)
T PRK13397 120 HIDKPILFKRGLMATIEEYLGALSYLQDTGKSNIILCERGV 160 (250)
T ss_pred ccCCeEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEcccc
Confidence 44678999999999999999999999988875455555665
No 308
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=28.38 E-value=1.5e+02 Score=24.37 Aligned_cols=49 Identities=22% Similarity=0.240 Sum_probs=33.2
Q ss_pred CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHH
Q 016141 167 GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYV 226 (394)
Q Consensus 167 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 226 (394)
|-.|++.|.+| ...+-+++++.+..+-+. | .+=+++||-|.|=.-++..
T Consensus 67 ~~~vi~Ld~~G---------k~~sSe~fA~~l~~~~~~-G-~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 67 GSYVVLLDIRG---------KALSSEEFADFLERLRDD-G-RDISFLIGGADGLSEAVKA 115 (155)
T ss_pred CCeEEEEecCC---------CcCChHHHHHHHHHHHhc-C-CeEEEEEeCcccCCHHHHH
Confidence 67899999987 335567777766655443 3 3356788999886655544
No 309
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=27.95 E-value=4.3e+02 Score=24.94 Aligned_cols=92 Identities=15% Similarity=0.079 Sum_probs=59.9
Q ss_pred CCCceEEEEcCCCCchh--cHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCH-HHHHHHHHHHHHHhCCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGAW--CWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSL-EQYVKPLIDTFNELGNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~--~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~-~~~~~~~~~~l~~l~~~~~~~lv 214 (394)
..+|.|+++=|..+... .-..++..|.+.|+.|+.-- | .++ ...++++..|-+.+|.+ +|
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~VllaA----~---------DTFRAaAiEQL~~w~er~gv~----vI 198 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLAA----G---------DTFRAAAIEQLEVWGERLGVP----VI 198 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEEe----c---------chHHHHHHHHHHHHHHHhCCe----EE
Confidence 45699999999877654 47889999999999998752 1 122 23446777777887755 56
Q ss_pred EeChHHH---HHHHHHHhCCcccceEEEeecccCC
Q 016141 215 GHDFGGA---CISYVMELFPSKVAKAVFIAATMLT 246 (394)
Q Consensus 215 GhS~Gg~---~a~~~a~~~p~~v~~lVli~~~~~~ 246 (394)
.|..|+= ++.......-.+=.-+|+++++...
T Consensus 199 ~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRL 233 (340)
T COG0552 199 SGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRL 233 (340)
T ss_pred ccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccc
Confidence 6556654 3333333222333457888988754
No 310
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=27.72 E-value=4.7e+02 Score=23.79 Aligned_cols=75 Identities=16% Similarity=0.267 Sum_probs=45.7
Q ss_pred cHHHHHHHHHh-CCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEE-eChHHHHHHHHHHhCC-
Q 016141 155 CWYKTMTLLKE-SGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG-HDFGGACISYVMELFP- 231 (394)
Q Consensus 155 ~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG-hS~Gg~~a~~~a~~~p- 231 (394)
.....+..+.+ .++.++.+|-+|....+ .+..+.+..+++..... .++||- -++++.-+...+..+.
T Consensus 141 ~l~~~l~~l~~~~~~D~ViIDt~Gr~~~~---------~~~l~el~~~~~~~~~~-~~~LVl~a~~~~~d~~~~~~~f~~ 210 (270)
T PRK06731 141 AMTRALTYFKEEARVDYILIDTAGKNYRA---------SETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKD 210 (270)
T ss_pred HHHHHHHHHHhcCCCCEEEEECCCCCcCC---------HHHHHHHHHHHhhhCCC-eEEEEEcCccCHHHHHHHHHHhCC
Confidence 33444455554 36999999999865321 23344455566655554 555544 4677877777777643
Q ss_pred cccceEEE
Q 016141 232 SKVAKAVF 239 (394)
Q Consensus 232 ~~v~~lVl 239 (394)
-.+.++|+
T Consensus 211 ~~~~~~I~ 218 (270)
T PRK06731 211 IHIDGIVF 218 (270)
T ss_pred CCCCEEEE
Confidence 35777776
No 311
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=27.71 E-value=75 Score=27.89 Aligned_cols=30 Identities=47% Similarity=0.472 Sum_probs=23.3
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecC
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDL 175 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 175 (394)
+.=||++|-|.+.. +..|+++||.|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAEQGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHHTTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHHCCCeEEEEec
Confidence 45688888777654 4468889999999996
No 312
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=27.52 E-value=59 Score=29.27 Aligned_cols=22 Identities=27% Similarity=0.667 Sum_probs=14.9
Q ss_pred HHHHHhCCCCcEEEEEeChHHH
Q 016141 200 DTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 200 ~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
.+++.+.--..|+++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 3344443224999999999976
No 313
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=27.45 E-value=4.5e+02 Score=23.48 Aligned_cols=84 Identities=11% Similarity=0.031 Sum_probs=46.1
Q ss_pred eEEEEcCC--CCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCC-------------CccCHHHHHHHHHHHHHHhC
Q 016141 142 HFVLVHGG--GFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTN-------------SITSLEQYVKPLIDTFNELG 206 (394)
Q Consensus 142 ~vvl~HG~--~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~-------------~~~~~~~~~~~~~~~l~~l~ 206 (394)
.+++.+++ |+.......++..|.+.|+.|..+-............ ...........+..++....
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNVKLIPVRVLKLKSLRDLLAILRLRRLLRKEK 81 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccchhhhceeeeecccccchhHHHHHHHHHHhcC
Confidence 35566664 4455667889999988899988876543332211110 11222334445666666665
Q ss_pred CCCcEEEEEeCh-HHHHHHHHHH
Q 016141 207 NEEKVILVGHDF-GGACISYVME 228 (394)
Q Consensus 207 ~~~~~~lvGhS~-Gg~~a~~~a~ 228 (394)
.+ +++.|+. ...+...+..
T Consensus 82 ~d---ii~~~~~~~~~~~~~~~~ 101 (353)
T cd03811 82 PD---VVISHLTTTPNVLALLAA 101 (353)
T ss_pred CC---EEEEcCccchhHHHHHHh
Confidence 54 5555654 4444444444
No 314
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=27.34 E-value=3.3e+02 Score=23.71 Aligned_cols=33 Identities=27% Similarity=0.332 Sum_probs=22.9
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCC
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLT 176 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 176 (394)
.+..+-|. ++..=+.++..|+++|++|++.|+.
T Consensus 15 k~~~vtGg--~sGIGrAia~~la~~Garv~v~dl~ 47 (256)
T KOG1200|consen 15 KVAAVTGG--SSGIGRAIAQLLAKKGARVAVADLD 47 (256)
T ss_pred ceeEEecC--CchHHHHHHHHHHhcCcEEEEeecc
Confidence 34445453 3344456778899999999999875
No 315
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=27.26 E-value=1.1e+02 Score=25.54 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=22.9
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhC
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELF 230 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 230 (394)
+...|++.++. .-.++|-|.|+.+|..++...
T Consensus 18 vl~~L~~~~~~-~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 18 VLKALEEAGIP-IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHcCCC-eeEEEEECHHHHHHHHHHcCC
Confidence 33444445554 558999999999999988643
No 316
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=27.04 E-value=2.3e+02 Score=28.18 Aligned_cols=86 Identities=17% Similarity=0.215 Sum_probs=52.7
Q ss_pred EEcCCCCchhcHHH-HHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHH
Q 016141 145 LVHGGGFGAWCWYK-TMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACI 223 (394)
Q Consensus 145 l~HG~~~~~~~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a 223 (394)
|--|+|.+...-.. -+++-...||.|+.+|-.|.-.. -+.+...+..+++.-.++ .|+.||--+=|.=+
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~---------~~~lm~~l~k~~~~~~pd-~i~~vgealvg~ds 512 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN---------NAPLMTSLAKLIKVNKPD-LILFVGEALVGNDS 512 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC---------ChhHHHHHHHHHhcCCCc-eEEEehhhhhCcHH
Confidence 34455555444333 33445556999999997764322 233445666777666666 89999988877766
Q ss_pred HHHHHhC---------CcccceEEEe
Q 016141 224 SYVMELF---------PSKVAKAVFI 240 (394)
Q Consensus 224 ~~~a~~~---------p~~v~~lVli 240 (394)
+.-+..+ |-.++++|+.
T Consensus 513 v~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 513 VDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHHHhcCCCccccceEEEE
Confidence 6544332 3347777663
No 317
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.92 E-value=3.8e+02 Score=25.59 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=45.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEE-EEe
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVIL-VGH 216 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l-vGh 216 (394)
..+.+|++--|...+.+.|...++.+.+.|-.=+++-.||. |..+.....++ ....+..+-+..++ +|++ ..|
T Consensus 223 ~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~--s~yp~~~~~~l--dl~~i~~lk~~~~~--PV~~d~~H 296 (360)
T PRK12595 223 RVNKPVLLKRGLSATIEEFIYAAEYIMSQGNGQIILCERGI--RTYEKATRNTL--DISAVPILKQETHL--PVMVDVTH 296 (360)
T ss_pred ccCCcEEEeCCCCCCHHHHHHHHHHHHHCCCCCEEEECCcc--CCCCCCCCCCc--CHHHHHHHHHHhCC--CEEEeCCC
Confidence 34678999999999999999999999887764344444443 43332212222 11122222233453 5666 699
Q ss_pred ChH
Q 016141 217 DFG 219 (394)
Q Consensus 217 S~G 219 (394)
|.|
T Consensus 297 s~G 299 (360)
T PRK12595 297 STG 299 (360)
T ss_pred CCc
Confidence 988
No 318
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=26.69 E-value=1e+02 Score=24.82 Aligned_cols=44 Identities=25% Similarity=0.257 Sum_probs=27.8
Q ss_pred eEEEEcCCCCchhc--HHHHHHHHHhCCcEEEEecCCCCCCCCCCC
Q 016141 142 HFVLVHGGGFGAWC--WYKTMTLLKESGFKVDAVDLTGSGVSSCDT 185 (394)
Q Consensus 142 ~vvl~HG~~~~~~~--~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 185 (394)
+||.+-|.-.+... -..++..|.++||+|.++=+-+||....+.
T Consensus 1 pvv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d~ 46 (140)
T PF03205_consen 1 PVVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEIDP 46 (140)
T ss_dssp -EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCST
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccCC
Confidence 36667676444433 477889999999999988777777665443
No 319
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=26.67 E-value=40 Score=32.93 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=22.3
Q ss_pred HhCCCCcEEEEEeChHHHHHHHHHHhCCccc
Q 016141 204 ELGNEEKVILVGHDFGGACISYVMELFPSKV 234 (394)
Q Consensus 204 ~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 234 (394)
+.++. +-++.|-|.|+.+|..++...++.+
T Consensus 97 E~gl~-p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 97 EANLL-PRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HcCCC-CCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33444 4489999999999999998655543
No 320
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=26.19 E-value=72 Score=31.60 Aligned_cols=59 Identities=7% Similarity=0.031 Sum_probs=37.6
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhC------CC-ceEEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSN------PP-ELVFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~------~~-~~~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
+..++..+|=.|..+|......-.+.+ .+ ..+.+++ +||++.+++|+...+.+..|+..
T Consensus 425 ~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHhh
Confidence 345556666666666554432222222 22 3445555 79999999999999999888753
No 321
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=26.18 E-value=1.1e+02 Score=25.55 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=27.8
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEe
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAV 173 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~ 173 (394)
...+.|+++-|-|.+...=...+++|.++|+.|.++
T Consensus 23 ~~~~~v~il~G~GnNGgDgl~~AR~L~~~G~~V~v~ 58 (169)
T PF03853_consen 23 PKGPRVLILCGPGNNGGDGLVAARHLANRGYNVTVY 58 (169)
T ss_dssp CTT-EEEEEE-SSHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCeEEEEECCCCChHHHHHHHHHHHHCCCeEEEE
Confidence 456788888888887777777889999999999883
No 322
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=26.07 E-value=3.3e+02 Score=26.12 Aligned_cols=75 Identities=9% Similarity=0.018 Sum_probs=49.3
Q ss_pred EEEEcCCCCchhcHHHHHHHHHhCC--cEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHH
Q 016141 143 FVLVHGGGFGAWCWYKTMTLLKESG--FKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGG 220 (394)
Q Consensus 143 vvl~HG~~~~~~~~~~~~~~l~~~g--~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg 220 (394)
.+++.|+..+......+++.+.... .+.|-+.. .+.+... ...++.++.+..++...|+. +.+..|.|.
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~~~VnlIpyn~--~~~~~~~----~ps~e~i~~F~~~L~~~Gi~---vtvR~~~G~ 353 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFFCKINLIDYNS--IVNIKFE----PVCSSTRERFRDRLLDAGLQ---VTVRKSYGT 353 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCCCeeEEeeecc--CCCCCCC----CCCHHHHHHHHHHHHHCCCc---EEeeCCCCc
Confidence 6889999999888888888887643 34444443 2222211 12344566777788887876 788899997
Q ss_pred HHHHHH
Q 016141 221 ACISYV 226 (394)
Q Consensus 221 ~~a~~~ 226 (394)
=+....
T Consensus 354 di~aAC 359 (368)
T PRK14456 354 TINAAC 359 (368)
T ss_pred chhhcC
Confidence 665443
No 323
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=25.20 E-value=5.3e+02 Score=25.34 Aligned_cols=70 Identities=14% Similarity=0.260 Sum_probs=43.9
Q ss_pred HHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCc--ccceE
Q 016141 160 MTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPS--KVAKA 237 (394)
Q Consensus 160 ~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~l 237 (394)
...+...+|.++.+|-+|.-. .-+.+.+.+..+.+..... .++||--++-|.-+...+..+-+ .+.++
T Consensus 175 l~~~~~~~~DvViIDTaGr~~---------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~ 244 (429)
T TIGR01425 175 VEKFKKENFDIIIVDTSGRHK---------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDSVDVGSV 244 (429)
T ss_pred HHHHHhCCCCEEEEECCCCCc---------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhccCCcEE
Confidence 344555689999999998432 1234455566666666655 67777777766666655555432 36677
Q ss_pred EE
Q 016141 238 VF 239 (394)
Q Consensus 238 Vl 239 (394)
|+
T Consensus 245 Il 246 (429)
T TIGR01425 245 II 246 (429)
T ss_pred EE
Confidence 76
No 324
>PRK06849 hypothetical protein; Provisional
Probab=24.76 E-value=5.8e+02 Score=24.34 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=44.2
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCC---------CCCCccCHHHHHHHHHHHHHHhCCCCcE
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSC---------DTNSITSLEQYVKPLIDTFNELGNEEKV 211 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~---------~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 211 (394)
..||++ |. +...-..++..|.+.|++|++.|......+.. .+....+.+++.+.+.++++..+++ +
T Consensus 5 ~~VLI~-G~--~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id--~ 79 (389)
T PRK06849 5 KTVLIT-GA--RAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENID--L 79 (389)
T ss_pred CEEEEe-CC--CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCC--E
Confidence 345555 32 22234567788999999999998764432210 0112245677888999999888764 4
Q ss_pred EEEEeC
Q 016141 212 ILVGHD 217 (394)
Q Consensus 212 ~lvGhS 217 (394)
++-+.+
T Consensus 80 vIP~~e 85 (389)
T PRK06849 80 LIPTCE 85 (389)
T ss_pred EEECCh
Confidence 444444
No 325
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=24.20 E-value=3.1e+02 Score=25.26 Aligned_cols=70 Identities=20% Similarity=0.338 Sum_probs=45.7
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCC--------CCCC---C--CCC-CccCHHHHHHHHHHHHHHhC
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGS--------GVSS---C--DTN-SITSLEQYVKPLIDTFNELG 206 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~--------G~s~---~--~~~-~~~~~~~~~~~~~~~l~~l~ 206 (394)
|-|||.-|.++ ..+.|+..||.|+..||-=- |..- + ++. -..+.+.+.+.+.+.++..|
T Consensus 253 Pmi~fakG~g~-------~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG 325 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFG 325 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhC
Confidence 78999988654 35678888999999998421 1110 0 111 22456777778888889888
Q ss_pred CCCcEEEEEeC
Q 016141 207 NEEKVILVGHD 217 (394)
Q Consensus 207 ~~~~~~lvGhS 217 (394)
...-+.=+||.
T Consensus 326 ~~ryI~NLGHG 336 (359)
T KOG2872|consen 326 KSRYIANLGHG 336 (359)
T ss_pred ccceEEecCCC
Confidence 66445555664
No 326
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=24.13 E-value=98 Score=28.09 Aligned_cols=71 Identities=10% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCCceEEEEcCCCCch--hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHH-HHHHHHHHhCCCCcEEEE
Q 016141 138 PETSHFVLVHGGGFGA--WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVK-PLIDTFNELGNEEKVILV 214 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~-~~~~~l~~l~~~~~~~lv 214 (394)
...|+||++.|+.++. ..-..+...|..+|++|.++.-|- -++... -+-.+-.++-..+.+.|+
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt-------------~eE~~~p~lWRfw~~lP~~G~i~IF 119 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS-------------AEELDHDFLWRIHKALPERGEIGIF 119 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC-------------HHHHcCchHHHHHHhCCCCCeEEEE
Confidence 3458999999996654 446888889999999999986441 122222 244455666544588888
Q ss_pred EeChHHH
Q 016141 215 GHDFGGA 221 (394)
Q Consensus 215 GhS~Gg~ 221 (394)
=-|+=+-
T Consensus 120 ~RSWY~~ 126 (264)
T TIGR03709 120 NRSHYED 126 (264)
T ss_pred cCccccc
Confidence 7775443
No 327
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=23.58 E-value=4e+02 Score=22.50 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=30.6
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHH-HHHHHhCCC
Q 016141 157 YKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLI-DTFNELGNE 208 (394)
Q Consensus 157 ~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~-~~l~~l~~~ 208 (394)
...+..|.+.|+.++-+.. |+ .....+++++++.+. .+++.+|++
T Consensus 129 ~~Nl~~L~~~G~~ii~P~~-g~------~~~p~~~~~~~~~i~~~~l~~lg~~ 174 (181)
T TIGR00421 129 LENMLRLSRMGAIILPPMP-AF------YTRPKSVEDMIDFIVGRVLDQLGIE 174 (181)
T ss_pred HHHHHHHHHCCCEEECCCC-cc------cCCCCCHHHHHHHHHHHHHHHcCCC
Confidence 4556678888999876653 32 113357888888664 677888875
No 328
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=23.56 E-value=1.9e+02 Score=24.90 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=34.3
Q ss_pred CceEEEEcCCCCchhc---HHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHH
Q 016141 140 TSHFVLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNE 204 (394)
Q Consensus 140 ~~~vvl~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~ 204 (394)
+.+|+++||-....-- .....+.|.+.|.+|-.-.++|-|.+- ..+...++.++|++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i--------~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEI--------SPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCC--------CHHHHHHHHHHHhh
Confidence 5689999998666433 345667888888877777777655431 24455566666654
No 329
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.47 E-value=50 Score=32.07 Aligned_cols=28 Identities=7% Similarity=0.104 Sum_probs=21.7
Q ss_pred cEEEEEeChHHHHHHHHHHhCCcccceE
Q 016141 210 KVILVGHDFGGACISYVMELFPSKVAKA 237 (394)
Q Consensus 210 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 237 (394)
+-++.|-|.|+.+|..++...++.+..+
T Consensus 96 p~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 96 PNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred CCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 4479999999999999998655555443
No 330
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=23.31 E-value=4.2e+02 Score=23.54 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=26.9
Q ss_pred CCceEEEEcCCCC--chhcH-HHHHHHHHhCCcEEEEecCC
Q 016141 139 ETSHFVLVHGGGF--GAWCW-YKTMTLLKESGFKVDAVDLT 176 (394)
Q Consensus 139 ~~~~vvl~HG~~~--~~~~~-~~~~~~l~~~g~~v~~~d~~ 176 (394)
.++.|+|++=... +...| ..+...+.+.|+.|..++..
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4678999998763 33444 34556778889998888765
No 331
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=23.16 E-value=2.9e+02 Score=22.15 Aligned_cols=15 Identities=27% Similarity=0.474 Sum_probs=11.4
Q ss_pred HHHHHHhCCcEEEEe
Q 016141 159 TMTLLKESGFKVDAV 173 (394)
Q Consensus 159 ~~~~l~~~g~~v~~~ 173 (394)
.+..|.+.|++|+++
T Consensus 100 ~~~~L~~~GwrvlvV 114 (150)
T COG3727 100 DIKRLQQLGWRVLVV 114 (150)
T ss_pred HHHHHHHcCCeEEEE
Confidence 456788889998775
No 332
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=23.05 E-value=2e+02 Score=27.28 Aligned_cols=85 Identities=19% Similarity=0.309 Sum_probs=55.4
Q ss_pred ceEEEEcCCCCchh-------cHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEE
Q 016141 141 SHFVLVHGGGFGAW-------CWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVIL 213 (394)
Q Consensus 141 ~~vvl~HG~~~~~~-------~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~l 213 (394)
..+|++|+-..+.. .|..+...+.+. -.+-.+|.-..|..++ +++..+..+.-+++. |.+ ++
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k-~~~pffDmAYQGfaSG------~~d~DA~avR~F~~~-g~~---~~ 266 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEK-NLLPFFDMAYQGFASG------DLDKDAQAVRLFVED-GHE---IL 266 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc-cccchhhhhhcccccC------CchhhHHHHHHHHHc-CCc---eE
Confidence 36999998766654 799888888776 3455567777776553 334445555555544 333 67
Q ss_pred EEeChHHHHHHHHHHhCCcccceEEEee
Q 016141 214 VGHDFGGACISYVMELFPSKVAKAVFIA 241 (394)
Q Consensus 214 vGhS~Gg~~a~~~a~~~p~~v~~lVli~ 241 (394)
+..|+.-.+.+ |.++|.++-+++
T Consensus 267 laQSyAKNMGL-----YgERvGa~svvc 289 (427)
T KOG1411|consen 267 LAQSYAKNMGL-----YGERVGALSVVC 289 (427)
T ss_pred eehhhhhhcch-----hhhccceeEEEe
Confidence 77777665554 667788776655
No 333
>TIGR03586 PseI pseudaminic acid synthase.
Probab=22.91 E-value=4.8e+02 Score=24.56 Aligned_cols=81 Identities=15% Similarity=0.088 Sum_probs=50.0
Q ss_pred CCCceEEEEcCCCCchhcHHHHHHHHHhCCc-EEEEecCCCCCCCCCCCC-CccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 138 PETSHFVLVHGGGFGAWCWYKTMTLLKESGF-KVDAVDLTGSGVSSCDTN-SITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~~~~~~~~l~~~g~-~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
..+.+||+.-|+ .+...|...+..+.+.|. .|+... +-|..+.. ...++. .|..+-+..+ -+|.+..
T Consensus 132 ~~gkPvilstG~-~t~~Ei~~Av~~i~~~g~~~i~Llh----C~s~YP~~~~~~nL~----~i~~lk~~f~--~pVG~SD 200 (327)
T TIGR03586 132 KTGKPIIMSTGI-ATLEEIQEAVEACREAGCKDLVLLK----CTSSYPAPLEDANLR----TIPDLAERFN--VPVGLSD 200 (327)
T ss_pred hcCCcEEEECCC-CCHHHHHHHHHHHHHCCCCcEEEEe----cCCCCCCCcccCCHH----HHHHHHHHhC--CCEEeeC
Confidence 346689999998 588889999999988777 455544 23333321 222222 2222333344 2687889
Q ss_pred eChHHHHHHHHHHh
Q 016141 216 HDFGGACISYVMEL 229 (394)
Q Consensus 216 hS~Gg~~a~~~a~~ 229 (394)
|+.|-.+++.+.+.
T Consensus 201 Ht~G~~~~~aAva~ 214 (327)
T TIGR03586 201 HTLGILAPVAAVAL 214 (327)
T ss_pred CCCchHHHHHHHHc
Confidence 99997666655553
No 334
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=22.00 E-value=61 Score=31.26 Aligned_cols=39 Identities=13% Similarity=0.078 Sum_probs=26.9
Q ss_pred HHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCcccceE
Q 016141 198 LIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKA 237 (394)
Q Consensus 198 ~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~l 237 (394)
+...|.+.|+. +-++.|-|.|+.+|..+|...++.+..+
T Consensus 101 v~kaL~e~gl~-p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 101 VVKALWLRGLL-PRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHHcCCC-CceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 33444555665 5579999999999999998555444333
No 335
>COG0218 Predicted GTPase [General function prediction only]
Probab=21.68 E-value=1.3e+02 Score=25.97 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=33.1
Q ss_pred CcCEEEEecCCCCCCChHHH---HHHHHhC---CCce--EEEEcCCCccCcccChHHHHHHHHHHHhh
Q 016141 332 SVPRFYIKTLQDCAIPVSVQ---EAMINSN---PPEL--VFEIKGSDHAPFFSKPRALHRILVEISKI 391 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~---~~l~~~~---~~~~--~~~i~~agH~~~~e~p~~v~~~i~~fl~~ 391 (394)
.+|++++.-..|.+-..+.. ..+++.+ +... ++.++-..... -+++.+.|.+++..
T Consensus 135 ~i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~~ 198 (200)
T COG0218 135 GIPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLKE 198 (200)
T ss_pred CCCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhhc
Confidence 48999999999998765543 3334332 2222 45554332222 46677777777654
No 336
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=21.64 E-value=3.3e+02 Score=24.84 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=34.7
Q ss_pred CcCEEEEecCCCCCCChHHHHHHHHhCCCceEEEEcC-CCccCc-ccChHHHHHHHHHHH
Q 016141 332 SVPRFYIKTLQDCAIPVSVQEAMINSNPPELVFEIKG-SDHAPF-FSKPRALHRILVEIS 389 (394)
Q Consensus 332 ~~PvLii~G~~D~~vp~~~~~~l~~~~~~~~~~~i~~-agH~~~-~e~p~~v~~~i~~fl 389 (394)
.+|++++.|++ ...++..+.+|+.+.+.++. -|++.- .-.|++..+.|.+=.
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~aa 200 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELREAV 200 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHHHH
Confidence 59999999875 34556667779988888765 364433 345666666665543
No 337
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=21.42 E-value=58 Score=30.38 Aligned_cols=30 Identities=10% Similarity=0.091 Sum_probs=21.2
Q ss_pred HHHhCCCCcEEEEEeChHHHHHHHHHHhCCc
Q 016141 202 FNELGNEEKVILVGHDFGGACISYVMELFPS 232 (394)
Q Consensus 202 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 232 (394)
+.+.++. +-++.|-|.|+.+|..++...++
T Consensus 90 L~e~gl~-p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 90 LVEHQLL-PRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHcCCC-CCEEEEECHHHHHHHHHHcCCHH
Confidence 3334554 45799999999999888875433
No 338
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=21.32 E-value=94 Score=27.48 Aligned_cols=29 Identities=24% Similarity=0.296 Sum_probs=21.1
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecC
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDL 175 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 175 (394)
.=||++|-|.+.+ +.+|+++||.|+.+|+
T Consensus 45 ~rvLvPgCGkg~D-----~~~LA~~G~~V~GvDl 73 (226)
T PRK13256 45 SVCLIPMCGCSID-----MLFFLSKGVKVIGIEL 73 (226)
T ss_pred CeEEEeCCCChHH-----HHHHHhCCCcEEEEec
Confidence 3567777665543 3468889999999996
No 339
>KOG2805 consensus tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase [Translation, ribosomal structure and biogenesis]
Probab=21.32 E-value=3e+02 Score=25.64 Aligned_cols=62 Identities=19% Similarity=0.150 Sum_probs=32.7
Q ss_pred ceEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCC
Q 016141 141 SHFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGN 207 (394)
Q Consensus 141 ~~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~ 207 (394)
.+||.+.|.-.++- -+..|+++||.|..+-++.+-.-+ ........+...+|+..+.+.|++
T Consensus 7 ~VvvamSgGVDSsV----aa~Ll~~~g~~v~gv~M~nWd~~d-e~~s~cp~e~D~~da~~Vc~~LnI 68 (377)
T KOG2805|consen 7 RVVVAMSGGVDSSV----AARLLAARGYNVTGVFMKNWDSLD-EFGSQCPAERDWKDAKRVCKQLNI 68 (377)
T ss_pred eEEEEecCCchHHH----HHHHHHhcCCCeeEEeeecccccc-ccccCCCchhhHHHHHHHHHHhCC
Confidence 46777766543322 134577889999888776662221 111223334444455555555543
No 340
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=21.15 E-value=1.2e+02 Score=26.86 Aligned_cols=71 Identities=11% Similarity=0.095 Sum_probs=48.6
Q ss_pred CCceEEEEcCCCCch--hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHH-HHHHHHHhCCCCcEEEEE
Q 016141 139 ETSHFVLVHGGGFGA--WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKP-LIDTFNELGNEEKVILVG 215 (394)
Q Consensus 139 ~~~~vvl~HG~~~~~--~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~-~~~~l~~l~~~~~~~lvG 215 (394)
+.|+||++.|+.++. ..-..+...|..+|++|.++.-| +-++...+ +-.+-..+-..+.+.|+=
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~p-------------t~eE~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKP-------------SDRERTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCC-------------CHHHHcChHHHHHHHhCCCCCeEEEEe
Confidence 458999999996654 44678888999999999998654 22222232 445556665555888888
Q ss_pred eChHHHH
Q 016141 216 HDFGGAC 222 (394)
Q Consensus 216 hS~Gg~~ 222 (394)
-|+=+-+
T Consensus 96 rSwY~~~ 102 (230)
T TIGR03707 96 RSWYNRA 102 (230)
T ss_pred CchhhhH
Confidence 7765443
No 341
>PF03283 PAE: Pectinacetylesterase
Probab=21.12 E-value=2.3e+02 Score=27.07 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=23.4
Q ss_pred CcEEEEEeChHHHHHHHHH----HhCCcccceEEEeecc
Q 016141 209 EKVILVGHDFGGACISYVM----ELFPSKVAKAVFIAAT 243 (394)
Q Consensus 209 ~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~lVli~~~ 243 (394)
++|+|-|.|.||.-++..+ ...|..++-..+.++.
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 5899999999999776644 3466544444444443
No 342
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=21.11 E-value=3.2e+02 Score=28.30 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=29.5
Q ss_pred CCCceEEEEcCCCCchhc---HHHHHHHHHhCCcEEEEecCC--CCCCC
Q 016141 138 PETSHFVLVHGGGFGAWC---WYKTMTLLKESGFKVDAVDLT--GSGVS 181 (394)
Q Consensus 138 ~~~~~vvl~HG~~~~~~~---~~~~~~~l~~~g~~v~~~d~~--G~G~s 181 (394)
.-+.+++++||.....-. -..+...|...|..|-..-+| ||+.+
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~ 597 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFS 597 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCC
Confidence 345689999997554432 345677888888877666666 45544
No 343
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.04 E-value=7.6e+02 Score=24.63 Aligned_cols=61 Identities=10% Similarity=0.055 Sum_probs=38.8
Q ss_pred CceEEEEcCCCCc---hhcHHHHHHHHHhCCcEEEEecCCC----CCCCCCCCCCccCHHHHHHHHHHHHH
Q 016141 140 TSHFVLVHGGGFG---AWCWYKTMTLLKESGFKVDAVDLTG----SGVSSCDTNSITSLEQYVKPLIDTFN 203 (394)
Q Consensus 140 ~~~vvl~HG~~~~---~~~~~~~~~~l~~~g~~v~~~d~~G----~G~s~~~~~~~~~~~~~~~~~~~~l~ 203 (394)
+.+||+++-.... .-.....+..|.+.|+.|+-++. | +|... .+.....+++++.+..++.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~G~~vi~P~~-g~lA~~g~~G--~Grm~e~~~I~~~v~~~~~ 247 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRDGVHMIGPNA-GEMAERGEAG--VGRMAEPLEIAAAAEALLR 247 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHCCCEEECCCC-CccccCCCcC--CCCCCCHHHHHHHHHHHHh
Confidence 4577888765433 22335667788889999986654 2 23322 2245678888888887774
No 344
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=20.96 E-value=1.6e+02 Score=26.11 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCC-cEEEEEeChHHHHHHHHHHhCC
Q 016141 198 LIDTFNELGNEE-KVILVGHDFGGACISYVMELFP 231 (394)
Q Consensus 198 ~~~~l~~l~~~~-~~~lvGhS~Gg~~a~~~a~~~p 231 (394)
+.+.+.+.++.. .-.+.|-|.|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 344444555531 3479999999999999998644
No 345
>COG0337 AroB 3-dehydroquinate synthetase [Amino acid transport and metabolism]
Probab=20.76 E-value=6.3e+02 Score=24.14 Aligned_cols=67 Identities=21% Similarity=0.317 Sum_probs=42.3
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGH 216 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGh 216 (394)
.+++++--.-.......+...|...|+.+..+..|.=. ..-++ +....+...+-..+.+++-.|||.
T Consensus 35 k~~ivtd~~v~~~y~~~~~~~l~~~g~~v~~~~lp~GE-------~~Ksl-~~~~~i~~~ll~~~~~R~s~iial 101 (360)
T COG0337 35 KVAIVTDETVAPLYLEKLLATLEAAGVEVDSIVLPDGE-------EYKSL-ETLEKIYDALLEAGLDRKSTLIAL 101 (360)
T ss_pred eEEEEECchhHHHHHHHHHHHHHhcCCeeeEEEeCCCc-------ccccH-HHHHHHHHHHHHcCCCCCcEEEEE
Confidence 67777665555555677888899999998666665322 22355 444556666666666655566653
No 346
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=20.49 E-value=3.3e+02 Score=22.82 Aligned_cols=54 Identities=20% Similarity=0.281 Sum_probs=36.0
Q ss_pred HHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChH
Q 016141 162 LLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFG 219 (394)
Q Consensus 162 ~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~G 219 (394)
.|.+.|++.+++|.=..=-.. ....-..++.+.+.++.+..+.+ ++.|+..|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~---~~~~i~~~~~~~~~~l~~~~~~~-~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP---YEDEIPPEYAEWLNELKKQFGKD-RVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC---CcCcCCHHHHHHHHHHHHHCCCC-eEEEEECCCC
Confidence 488889999999986543221 12223345666666666665555 8999999986
No 347
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=20.31 E-value=1.7e+02 Score=24.15 Aligned_cols=62 Identities=19% Similarity=0.199 Sum_probs=34.3
Q ss_pred CcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCCcccceEEEeeccc
Q 016141 167 GFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGACISYVMELFPSKVAKAVFIAATM 244 (394)
Q Consensus 167 g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lVli~~~~ 244 (394)
+-.++++|-.| ...+-+++++.+..+... +..+-+++||-+.|=.-.+ -. +.+..+.+++..
T Consensus 67 ~~~~i~Ld~~G---------k~~sS~~fA~~l~~~~~~-g~~~i~F~IGG~~G~~~~~--~~----~a~~~lSLS~mT 128 (155)
T PF02590_consen 67 NDYVILLDERG---------KQLSSEEFAKKLERWMNQ-GKSDIVFIIGGADGLSEEV--RK----RADEKLSLSKMT 128 (155)
T ss_dssp TSEEEEE-TTS---------EE--HHHHHHHHHHHHHT-TS-EEEEEE-BTTB--HHH--HH----H-SEEEES-SS-
T ss_pred CCEEEEEcCCC---------ccCChHHHHHHHHHHHhc-CCceEEEEEecCCCCCHHH--Hh----hcCceEEEecCC
Confidence 57789999776 446778888888887766 3322678999999843222 22 233455666544
No 348
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.26 E-value=1e+02 Score=24.01 Aligned_cols=23 Identities=30% Similarity=0.398 Sum_probs=19.8
Q ss_pred hcHHHHHHHHHhCCcEEEEecCC
Q 016141 154 WCWYKTMTLLKESGFKVDAVDLT 176 (394)
Q Consensus 154 ~~~~~~~~~l~~~g~~v~~~d~~ 176 (394)
..|..++..|+++||.|++.|.-
T Consensus 23 G~~~~VA~~L~e~g~dv~atDI~ 45 (129)
T COG1255 23 GFFLDVAKRLAERGFDVLATDIN 45 (129)
T ss_pred chHHHHHHHHHHcCCcEEEEecc
Confidence 35778999999999999999963
No 349
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=20.15 E-value=3.6e+02 Score=26.00 Aligned_cols=63 Identities=17% Similarity=0.210 Sum_probs=35.9
Q ss_pred eEEEEcCCCCch-hcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEE
Q 016141 142 HFVLVHGGGFGA-WCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVG 215 (394)
Q Consensus 142 ~vvl~HG~~~~~-~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG 215 (394)
.++++.|-.... ..+..+...|.+.|+.+..+|-- . ...+. +.++.+.+++...+.+ -|+-||
T Consensus 23 k~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~f~~v----~-----~~p~~-~~v~~~~~~~~~~~~D-~IIaiG 86 (398)
T cd08178 23 RAFIVTDRFMVKLGYVDKVIDVLKRRGVETEVFSDV----E-----PDPSL-ETVRKGLELMNSFKPD-TIIALG 86 (398)
T ss_pred eEEEEcChhHHhCccHHHHHHHHHHCCCeEEEecCC----C-----CCcCH-HHHHHHHHHHHhcCCC-EEEEeC
Confidence 466666643222 36777888999889988877621 1 11233 3344455566666766 444343
No 350
>TIGR00824 EIIA-man PTS system, mannose/fructose/sorbose family, IIA component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Man family is unique in several respects among PTS permease families It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the IIA components.
Probab=20.05 E-value=4.1e+02 Score=20.42 Aligned_cols=73 Identities=21% Similarity=0.251 Sum_probs=47.6
Q ss_pred eEEEEcCCCCchhcHHHHHHHHHhCCcEEEEecCCCCCCCCCCCCCccCHHHHHHHHHHHHHHhCCCCcEEEEEeChHHH
Q 016141 142 HFVLVHGGGFGAWCWYKTMTLLKESGFKVDAVDLTGSGVSSCDTNSITSLEQYVKPLIDTFNELGNEEKVILVGHDFGGA 221 (394)
Q Consensus 142 ~vvl~HG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ 221 (394)
.||..||- -+......++.+....-+|.++++. ...+.+++.+.+.++++.++.++.++++-==+||.
T Consensus 4 ili~sHG~--~A~gl~~s~~~i~G~~~~i~~i~~~----------~~~~~~~~~~~l~~~i~~~~~~~~vivltDl~GGS 71 (116)
T TIGR00824 4 IIISGHGQ--AAIALLKSAEMIFGEQNNVGAVPFV----------PGENAETLQEKYNAALADLDTEEEVLFLVDIFGGS 71 (116)
T ss_pred EEEEecHH--HHHHHHHHHHHHcCCcCCeEEEEcC----------CCcCHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 67888985 3334444455554332346666643 23578899999999999886555788787777887
Q ss_pred HHHHH
Q 016141 222 CISYV 226 (394)
Q Consensus 222 ~a~~~ 226 (394)
..-.+
T Consensus 72 p~n~a 76 (116)
T TIGR00824 72 PYNAA 76 (116)
T ss_pred HHHHH
Confidence 55433
No 351
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=20.01 E-value=3.5e+02 Score=22.87 Aligned_cols=62 Identities=15% Similarity=0.182 Sum_probs=37.0
Q ss_pred CCceEEEEcCCCC---chhcHHHHHHHHHhCCcEEEEecCCCC---CCCCCCCCCccCHHHHHHHHHHHHH
Q 016141 139 ETSHFVLVHGGGF---GAWCWYKTMTLLKESGFKVDAVDLTGS---GVSSCDTNSITSLEQYVKPLIDTFN 203 (394)
Q Consensus 139 ~~~~vvl~HG~~~---~~~~~~~~~~~l~~~g~~v~~~d~~G~---G~s~~~~~~~~~~~~~~~~~~~~l~ 203 (394)
.+.+||+++-... ....+...+..|.+.|+.|+-+. +|+ |... .....+++++++.+..++.
T Consensus 112 ~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~vi~p~-~g~la~~~~g--~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 112 ATTPKLIAPAMNTKMYENPATQRNLKTLKEDGVQEIEPK-EGLLACGDEG--YGALADIETILETIENTLK 179 (182)
T ss_pred CCCCEEEEECCCHHHhcCHHHHHHHHHHHHCCCEEECCC-CCccccCCcc--CCCCCCHHHHHHHHHHHhc
Confidence 3456666664322 22234566788888898888776 444 3332 1234677888777776553
Done!