Citrus Sinensis ID: 016143

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MDCGSGFTKSETEEGEFSEKDPSCRYGRYDEILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDNIFVNGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTCEYPYNECKNPAQIYKKVTSGIKPASLSKVTDPQVKQFIEKCIVPASLRLPALELLKDPFLVTDNPKDLVCDPLRLPNLVPEVMNLAHSEPHPMDIDLNHKKVSADSCAKSNTGTWFLTLELQRLTENNEFTLRGEKNDDDTVSLTLRIGDKSGKRICGAINSCFFFPPCC
ccccccccccccccccccccccccccccccEECccccccEEEEEECccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccEEEEEEEEEccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccEEEEcccccEEEcccHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHcccccccccHHHHHcccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccHHHHHHccccccEEEEcECcccccEEEEEEccccccccccccEEEECcccccc
***********************CRYGRYDEILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDNIFVNGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTCEYPYNECKNPAQIYKKVTSGIKPASLSKVTDPQVKQFIEKCIVPASLRLPALELLKDPFLVTDNPKDLVCDPLRLPNLVPEVMNLA********************CAKSNTGTWFLTLELQRLTENNEFTLRGEKNDDDTVSLTLRIGDKSGKRICGAINSCFFFPPCC
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MDCGSGFTKSETEEGEFSEKDPSCRYGRYDEILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDNIFVNGNNGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTCEYPYNECKNPAQIYKKVTSGIKPASLSKVTDPQVKQFIEKCIVPASLRLPALELLKDPFLVTDNPKDLVCDPLRLPNLVPEVMNLAHSEPHPMDIDLNHKKVSADSCAKSNTGTWFLTLELQRLTENNEFTLRGEKNDDDTVSLTLRIGDKSGKRICGAINSCFFFPPCC

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable serine/threonine-protein kinase WNK4 probableQ6EU49
Serine/threonine-protein kinase WNK8 Regulates flowering time by modulating the photoperiod pathway. Phosphorylates the vacuolar ATPase subunit C (VATC).probableQ944Q0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1T4H, chain A
Confidence level:very confident
Coverage over the Query: 17-285
View the alignment between query and template
View the model in PyMOL
Template: 4APC, chain A
Confidence level:very confident
Coverage over the Query: 40-311
View the alignment between query and template
View the model in PyMOL