BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016150
(394 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 513 bits (1322), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/385 (62%), Positives = 286/385 (74%), Gaps = 1/385 (0%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
QT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RI
Sbjct: 168 QTILLNGRGQFDCSIAAKY-DSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAA 226
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 129
+ NH+++VVEADGNYVQPF D+DIYSGESYSVL+TT+Q+PS NYW+S G R R
Sbjct: 227 LNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARH 286
Query: 130 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRR 189
P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP F+RR
Sbjct: 287 PNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRR 346
Query: 190 LTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKP 249
+ LLNTQN ING+ KWAIN+VSL LPPTPYLG++KY L AFDQN PPE F +YD+ P
Sbjct: 347 IFLLNTQNVINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTP 406
Query: 250 PVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTK 309
P N T +G+GVY + VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKF+
Sbjct: 407 PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSA 466
Query: 310 EDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVE 369
E+E T VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE
Sbjct: 467 EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE 526
Query: 370 TVGNIPNQALACGLTGKRFMNPKQN 394
VG IP +ALACG T K +N +N
Sbjct: 527 KVGRIPTKALACGGTAKSLINNPKN 551
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 142/363 (39%), Gaps = 74/363 (20%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G++ AA S I++V+ K YR+R+
Sbjct: 169 LINGKGRYVGGPAAELS------------------IVNVEQGKKYRMRLISLSCDPNWQF 210
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV-RGRKP- 130
+ H++ ++E DG +P VD + I++G+ YS +L NQ P NYWI A +GR
Sbjct: 211 SIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGL 269
Query: 131 ----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP-PTN 185
A +L Y + + S P + ++ D A G P P +
Sbjct: 270 AGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDP---AAPGIPTPGAAD 326
Query: 186 FHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 243
+ R L GF+ ++ IN + P P L I G +
Sbjct: 327 VNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGAQ--------------- 363
Query: 244 YDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 302
+AN L +G VY L N V++++ P HP+HLHGH F V+ R
Sbjct: 364 --------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSVV-R 409
Query: 303 GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 362
G T T +RFV DNPG W FHCHIE H G+ +
Sbjct: 410 SAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAI 464
Query: 363 VLA 365
V A
Sbjct: 465 VFA 467
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 142/363 (39%), Gaps = 74/363 (20%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G++ AA S I++V+ K YR+R+
Sbjct: 169 LINGKGRYVGGPAAELS------------------IVNVEQGKKYRMRLISLSCDPNWQF 210
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGV-RGRKP- 130
+ H++ ++E DG +P VD + I++G+ YS +L NQ P NYWI A +GR
Sbjct: 211 SIDGHELTIIEVDGELTEPHTVDRLQIFTGQRYSFVLDANQ-PVDNYWIRAQPNKGRNGL 269
Query: 131 ----ATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKP-PTN 185
A +L Y + + S P + ++ D A G P P +
Sbjct: 270 AGTFANGVNSAILRYAGAANADPTTSANPNPAQLNEADLHALIDP---AAPGIPTPGAAD 326
Query: 186 FHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 243
+ R L GF+ ++ IN + P P L I G +
Sbjct: 327 VNLRFQL--------GFSGGRFTINGTAYESPSVPTLLQIMSGAQ--------------- 363
Query: 244 YDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFWVLGR 302
+AN L +G VY L N V++++ P HP+HLHGH F V+ R
Sbjct: 364 --------SANDLLPAGSVYELPRNQVVELVVPAGVLGGP-----HPFHLHGHAFSVV-R 409
Query: 303 GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 362
G T T +RFV DNPG W FHCHIE H G+ +
Sbjct: 410 SAGSSTYNFVNPVKRDVVSLGVTG-----DEVTIRFVTDNPGPWFFHCHIEFHLMNGLAI 464
Query: 363 VLA 365
V A
Sbjct: 465 VFA 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 129/341 (37%), Gaps = 59/341 (17%)
Query: 47 QILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYS 106
++ V+ K YR+R+ + H M ++E DG Q VD++ I++ + YS
Sbjct: 189 SVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVDEIQIFAAQRYS 248
Query: 107 VLLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDD 162
+L NQ P NYWI A G G A+ L Y + + P+T
Sbjct: 249 FVLNANQ-PVGNYWIRANPNSGGEGFDGGINSAI--LRYDGATTAD------PVTVA--S 297
Query: 163 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 220
H+K + P N H+ N ++ GF + IN VS T P P L
Sbjct: 298 TVHTKCLIETDLHPLSRNGVPGNPHQGGADCNLNLSL-GFACGNFVINGVSFTPPTVPVL 356
Query: 221 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANA 279
I G A D L SG V L N+T+++ L A
Sbjct: 357 LQICSGANTAAD-----------------------LLPSGSVISLPSNSTIEIALPAGAA 393
Query: 280 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 339
P HP+HLHGHDF V + D+ + +RF
Sbjct: 394 GGP-----HPFHLHGHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNV------TIRFC 442
Query: 340 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALA 380
DNPG W HCHI+ H G +V A +IPN A A
Sbjct: 443 TDNPGPWFLHCHIDWHLDAGFAIVFAE------DIPNTASA 477
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 140/374 (37%), Gaps = 70/374 (18%)
Query: 6 IHTHQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXX 65
+ T LING G+ +LAA + ++ V K YR R+
Sbjct: 162 VPTADATLINGLGRSAATLAADLA------------------VITVTKGKRYRFRLVSLS 203
Query: 66 XXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA-- 123
+ H + V+EAD ++P VD + I++ + YS +L +QD NYWI A
Sbjct: 204 CDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD-NYWIRALP 262
Query: 124 --GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSNKIFALMGSP 180
G + T A +L Y P+ P TP + S + K A GSP
Sbjct: 263 NSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTLKGTAAPGSP 316
Query: 181 KPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 238
P L L N GF + IN S T P P L I G + A D
Sbjct: 317 TPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQSAAD------ 363
Query: 239 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 298
+ P VY L N +++ L A A P HP+HLHGH F
Sbjct: 364 --------LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HPFHLHGHVFA 404
Query: 299 VLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 358
V+ R G T + P +RF DNPG W HCHI+ H
Sbjct: 405 VV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEA 458
Query: 359 GMGVVLALGVETVG 372
G VV+A + V
Sbjct: 459 GFAVVMAEDIPDVA 472
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 140/374 (37%), Gaps = 70/374 (18%)
Query: 6 IHTHQTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXX 65
+ T LING G+ +LAA + ++ V K YR R+
Sbjct: 162 VPTADATLINGLGRSAATLAADLA------------------VITVTKGKRYRFRLVSLS 203
Query: 66 XXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISA-- 123
+ H + V+EAD ++P VD + I++ + YS +L +QD NYWI A
Sbjct: 204 CDPNYTFSIDGHSLTVIEADSVNLKPHTVDSLQIFAAQRYSFVLNADQDVD-NYWIRALP 262
Query: 124 --GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDDYDHSKSFSNKIFALMGSP 180
G + T A +L Y P+ P TP + S + K A GSP
Sbjct: 263 NSGTQNFAGGTNSA--ILRYD----GAAPVEPTTSQTPSTNPLVESALTTLKGTAAPGSP 316
Query: 181 KPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPE 238
P L L N GF + IN S T P P L I G + A D
Sbjct: 317 TPGG---VDLAL----NMAFGFAGGNFTINGASFTPPTVPVLLQILSGAQSAAD------ 363
Query: 239 NFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDFW 298
+ P VY L N +++ L A A P HP+HLHGH F
Sbjct: 364 --------LLP--------AGSVYSLPANADIEISLP-ATAAAPGFP--HPFHLHGHVFA 404
Query: 299 VLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHI 358
V+ R G T + P +RF DNPG W HCHI+ H
Sbjct: 405 VV-RSAGSSTYN-----YANPVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEA 458
Query: 359 GMGVVLALGVETVG 372
G VV+A + V
Sbjct: 459 GFAVVMAEDIPDVA 472
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 122/326 (37%), Gaps = 53/326 (16%)
Query: 48 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 107
++ V K YR R+ + +H++ V+EADG QP VD + I++ + YS
Sbjct: 187 VISVTKGKRYRFRLVSLSCDPNYTFSIDSHQLTVIEADGVSTQPVTVDSIQIFAAQRYSF 246
Query: 108 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDY 163
+L NQD NYWI A G G A +L Y P+ P +
Sbjct: 247 VLNANQDVD-NYWIRANPNFGTTGFADGVNSA--ILRYDDAD---------PVEPVTNQT 294
Query: 164 DHSKSFSNKIFALMGSPKP--PTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLG 221
+ + L P P PT L LN +G T + IN S T P P L
Sbjct: 295 GTTLLLETDLHPLTSMPVPGNPTQGGADLN-LNMAFNFDG-TNFFINGESFTPPTVPVLL 352
Query: 222 SIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAI 280
I G A D L SG VY L N+++++ A
Sbjct: 353 QIISGANTAQD-----------------------LLPSGSVYSLPSNSSIEITFPATTAA 389
Query: 281 RPNLSEIHPWHLHGHDFWVL-GRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 339
HP+HLHGH F V+ G + +D +RF
Sbjct: 390 P---GAPHPFHLHGHVFAVVRSAGSTSYNYDDPVWRDVVSTGTPQAG-----DNVTIRFQ 441
Query: 340 ADNPGAWAFHCHIEPHFHIGMGVVLA 365
DNPG W HCHI+ H G VV+A
Sbjct: 442 TDNPGPWFLHCHIDFHLDAGFAVVMA 467
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 126/341 (36%), Gaps = 62/341 (18%)
Query: 44 CAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGE 103
A +++VQ K YR R+ + H + V+E DG QP VD + I++ +
Sbjct: 183 AALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDGINSQPLLVDSIQIFAAQ 242
Query: 104 SYSVLLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTS-------ASKIPLS 152
YS +L NQ NYWI A G G A+ P + S IPL
Sbjct: 243 RYSFVLNANQTVG-NYWIRANPNFGTVGFAGGINSAILRYQGAPVAEPTTTQTTSVIPLI 301
Query: 153 PPPITPRWDDYDHSKSFSNKIFALMGSPKPPT--NFHRRLTLLNTQNTINGFTKWAINNV 210
+ P A M P PT + L L N N F INN
Sbjct: 302 ETNLHP---------------LARMPVPGSPTPGGVDKALNLAFNFNGTNFF----INNA 342
Query: 211 SLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTV 270
S T P P L I G + A D + P VY L ++T+
Sbjct: 343 SFTPPTVPVLLQILSGAQTAQD--------------LLP--------AGSVYPLPAHSTI 380
Query: 271 DVILQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP 330
++ L A A+ P HP+HLHGH F V+ R G T A
Sbjct: 381 EITLP-ATALAPGAP--HPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDVVSTGTPAA--- 433
Query: 331 YGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETV 371
+RF DNPG W HCHI+ H G +V A V V
Sbjct: 434 GDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADV 474
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 128/333 (38%), Gaps = 54/333 (16%)
Query: 48 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 107
++ V K YR R+ + H + V+EAD ++P VD + I++ + YS
Sbjct: 186 VITVTKGKRYRFRLVSLSCDPNHVFSIDGHSLTVIEADSVNLKPQTVDSIQIFAAQRYSF 245
Query: 108 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPI-TPRWDD 162
+L +QD NYWI A G R A+ L Y P+ P TP +
Sbjct: 246 VLNADQDVG-NYWIRALPNSGTRNFDGGVNSAI--LRYD----GAAPVEPTTSQTPSTNP 298
Query: 163 YDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFT--KWAINNVSLTLPPTPYL 220
S + + A GSP P L L N GF K+ IN S T P P L
Sbjct: 299 LVESALTTLEGTAAPGSPAPGG---VDLAL----NMAFGFAGGKFTINGASFTPPTVPVL 351
Query: 221 GSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANA 279
I G + A D L SG VY L N +++ L A A
Sbjct: 352 LQILSGAQSAQD-----------------------LLPSGSVYSLPANADIEISLP-ATA 387
Query: 280 IRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFV 339
P HP+HLHGH F V+ R G T E P +RF
Sbjct: 388 AAPGFP--HPFHLHGHTFAVV-RSAGSSTYNYENPVYRDVVSTGS-----PGDNVTIRFR 439
Query: 340 ADNPGAWAFHCHIEPHFHIGMGVVLALGVETVG 372
DNPG W HCHI+ H G VV+A + V
Sbjct: 440 TDNPGPWFLHCHIDFHLEAGFAVVMAEDIPEVA 472
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 126/332 (37%), Gaps = 66/332 (19%)
Query: 48 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 107
++ V K YR R+ + NH M ++EAD QP EVD + I++ + YS
Sbjct: 187 VIKVTQGKRYRFRLVSLSCDPNHTFSIDNHTMTIIEADSINTQPLEVDSIQIFAAQRYSF 246
Query: 108 LLTTNQDPSYNYWISA----GVRGRKPATPPALTLLN----YHPTSASKIPLSP------ 153
+L +Q P NYWI A G G A+ + PTS P P
Sbjct: 247 VLDASQ-PVDNYWIRANPAFGNTGFAGGINSAILRYDGAPEIEPTSVQTTPTKPLNEVDL 305
Query: 154 PPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLT 213
P++P + GSP+ P + L L+ N N F IN+ +
Sbjct: 306 HPLSP---------------MPVPGSPE-PGGVDKPLNLVFNFNGTNFF----INDHTFV 345
Query: 214 LPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI 273
P P L I G + A Q+ PE V++L N+++++
Sbjct: 346 PPSVPVLLQILSGAQAA--QDLVPE--------------------GSVFVLPSNSSIEIS 383
Query: 274 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGW 333
A A P HP+HLHGH F V+ D P
Sbjct: 384 FP-ATANAPGFP--HPFHLHGHAFAVVRSAGSSVYNYDNPIFRDVVSTGQ------PGDN 434
Query: 334 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLA 365
+RF +NPG W HCHI+ H G VV+A
Sbjct: 435 VTIRFETNNPGPWFLHCHIDFHLDAGFAVVMA 466
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 133/382 (34%), Gaps = 94/382 (24%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
T LING G+ + +N SA Q ++ VQ K YR RI
Sbjct: 192 DTTLINGLGR-------NSANPSAGQLA----------VVSVQSGKRYRFRIVSTSCFPN 234
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAG-VRGR 128
+ H+M V+E DG QP VD + I++G+ YSV++ NQ NYWI A GR
Sbjct: 235 YAFSIDGHRMTVIEVDGVSHQPLTVDSLTIFAGQRYSVVVEANQAVG-NYWIRANPSNGR 293
Query: 129 KPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP-KPPTNFH 187
T ++ IF G+ PT
Sbjct: 294 NGFT----------------------------------GGINSAIFRYQGAAVAEPTTSQ 319
Query: 188 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 247
T LN N I A P P G L +N +F+
Sbjct: 320 NSGTALNEANLIPLINPGA--------PGNPVPGGADINLNLRIGRNATTADFTINGAPF 371
Query: 248 KPP------------VNANTTL-GSGVYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 294
PP N N L G V L N +++ + HP+HLHG
Sbjct: 372 IPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPGGGN--------HPFHLHG 423
Query: 295 HDFWVLGR-GEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIE 353
H+F V+ G + + V F RFV DNPG W HCHI+
Sbjct: 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTF-------RFVTDNPGPWFLHCHID 476
Query: 354 PHFHIGMGVVLALGVETVGNIP 375
H G+ VV A E + NIP
Sbjct: 477 WHLEAGLAVVFA---EDIPNIP 495
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 140/371 (37%), Gaps = 81/371 (21%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
++LING G+F + G+A ++ V+ NK YR R+
Sbjct: 167 DSVLINGLGRF--------AGGNASDLA----------VITVEQNKRYRFRLVSLSCDPN 208
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 129
+ H M ++E DG +P EVD + I++ + YS +L Q NYWI A
Sbjct: 209 FTFSIDGHNMTIIEVDGVNHEPLEVDSIQIFASQRYSFVLNATQSVD-NYWIRAIPNTGT 267
Query: 130 PATPPAL--TLLNY------HPT---SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMG 178
T L +L Y PT + S IPL + P +
Sbjct: 268 IDTTGGLNSAILRYSGADIVDPTANATTSVIPLVETDLVP------------------LD 309
Query: 179 SPKPPTN--FHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGP 236
SP P + +N + NG T + INN +L P P L I G + A D
Sbjct: 310 SPAAPGDPVVGGVDLAMNLDFSFNG-TNFFINNETLIPPTVPVLLQILSGAQSASD---- 364
Query: 237 PENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVI--LQNANAIRPNLSEIHPWHLHG 294
+ P GS VY L LN+T+++ + N + HP+HLHG
Sbjct: 365 ----------LLP-------TGS-VYTLPLNSTIELSFPITTVNGVTNAPGAPHPFHLHG 406
Query: 295 HDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEP 354
H F V+ R G D T P +RF DN G W HCHI+
Sbjct: 407 HAFSVV-RSAGS---SDYNYVNPVRRDTVSTGN--PGDNVTIRFTTDNAGPWFLHCHIDF 460
Query: 355 HFHIGMGVVLA 365
H G +V A
Sbjct: 461 HLEAGFAIVFA 471
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 124/321 (38%), Gaps = 50/321 (15%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 110
VQP+ TY LRI +++H+M VVE DG + D + I + Y+VL+
Sbjct: 182 VQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTDMLYITVAQRYTVLVH 241
Query: 111 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 170
T D N+ I P+ LN + S + + P + D +F
Sbjct: 242 TKNDTDKNFAIMQKFDDTMLDVIPSDLQLN----ATSYMVYNKTAALPTQNYVDSIDNFL 297
Query: 171 NKIF-------ALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSI 223
+ + A+ G P H + N NG NN++ T P P L ++
Sbjct: 298 DDFYLQPYEKEAIYGEPD-----HVITVDVVMDNLKNGVNYAFFNNITYTAPKVPTLMTV 352
Query: 224 KYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPN 283
+G N S Y +NT ++L + V+++L N +
Sbjct: 353 L--------SSGDQANNSEIY-------GSNT----HTFILEKDEIVEIVLNNQD----- 388
Query: 284 LSEIHPWHLHGHDFWVLGR--------GEGKFTKE-DEXXXXXXXXXXXXTAVIFPYGWT 334
+ HP+HLHGH F + R GE + + D T + P
Sbjct: 389 -TGTHPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNF 447
Query: 335 ALRFVADNPGAWAFHCHIEPH 355
+RF ADNPG W FHCHIE H
Sbjct: 448 VIRFKADNPGVWFFHCHIEWH 468
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 125/340 (36%), Gaps = 64/340 (18%)
Query: 48 ILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSV 107
++ V K YR R+ + H+M +++ D VQP V + IY+ + YS
Sbjct: 187 VISVTAGKRYRFRLVSNSCDPNYTFSIDGHQMTIIQVDSINVQPLVVLKIQIYAAQRYSF 246
Query: 108 LLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSK 167
+L NQ + NYWI A P + +
Sbjct: 247 ILNANQAVN-NYWIRA---------------------------------NPNQGNVGFTN 272
Query: 168 SFSNKIFALMGSP--KPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKY 225
++ I G+ +P T+ + L+ Q ++ T A+ P +P G +
Sbjct: 273 GINSAILRYSGAAATQPTTSQTSSVQPLD-QTNLHPLTATAV-------PGSPVAGGVNL 324
Query: 226 GLKDAFDQNGPPENFSNEYDVMKPPV-----------NANTTLGSG-VYMLGLNTTVDVI 273
+ AF+ NG +F + + P V +A L SG VY L + +++
Sbjct: 325 AINQAFNFNGT-NHFVDGASFVPPTVPVLSQIVSGAQSAADLLASGLVYSLPSDANIEIS 383
Query: 274 LQNANAIRPNLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGW 333
+A HP+HLHGH F V+ R G T A
Sbjct: 384 FPATSAAA---GGPHPFHLHGHAFAVV-RSAGSTTYNYNDPIFRDTVSTGTPAA---NDN 436
Query: 334 TALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGN 373
+RF +NPG W HCHI+ H G VV A + V +
Sbjct: 437 VTIRFKTNNPGPWFLHCHIDFHLEAGFAVVFAQDIPDVAS 476
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 110
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 111 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 170
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 171 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 214
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 215 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 273
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 274 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 318
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 319 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 362
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 110
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 111 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 170
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 171 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 214
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 215 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 273
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 274 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 318
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 319 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 362
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 128/344 (37%), Gaps = 79/344 (22%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 110
+ P K +RLRI + NH M V+ AD V VD + + G+ Y V++
Sbjct: 219 LTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVID 278
Query: 111 TNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFS 170
++ P NYW + G+ LN HP +
Sbjct: 279 ASRAPD-NYWFNVTFGGQAACG----GSLNPHPAA------------------------- 308
Query: 171 NKIFALMGSP--------KPPTNFHRRLTLLNTQNTI------NGFTKWAINN--VSLTL 214
IF G+P PP + H+ L L+ + + N F K N V+L L
Sbjct: 309 --IFHYAGAPGGLPTDEGTPPVD-HQCLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL 365
Query: 215 PPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVYMLGLNTT-VDVI 273
TP + NG N D KP ++ T G+ Y + N VD +
Sbjct: 366 TGTPLF---------VWKVNGSDINV----DWGKPIIDYILT-GNTSYPVSDNIVQVDAV 411
Query: 274 LQNANAIRPN-----LSEIHPWHLHGHDFWVLGRG-------EGKFTKE---DEXXXXXX 318
Q + N S HP HLHGHDF VLGR + +F + D
Sbjct: 412 DQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGD 471
Query: 319 XXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGV 362
T ++ GW L F DNPGAW FHCHI H G+ V
Sbjct: 472 NPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSV 515
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 124/388 (31%), Gaps = 108/388 (27%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G+ + A S ++ V P K YR R+
Sbjct: 170 LINGKGRSPSTTTADLS------------------VISVTPGKRYRFRLVSLSCDPNYTF 211
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI----------- 121
+ H M ++E D P VD + I++ + YS +L NQ NYWI
Sbjct: 212 SIDGHNMTIIETDSINTAPLVVDSIQIFAAQRYSFVLEANQAVD-NYWIRANPNFGNVGF 270
Query: 122 -----SAGVR--GRKPATPPA--------LTLLNYHPTSASKIPLSPPPITPRWDDYDHS 166
SA +R G P L +N HP A+ +P SP
Sbjct: 271 TGGINSAILRYDGAAAVEPTTTQTTSTAPLNEVNLHPLVATAVPGSP------------- 317
Query: 167 KSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 226
+ G +N NG T + IN S T P P L I G
Sbjct: 318 ---------VAGGVD---------LAINMAFNFNG-TNFFINGASFTPPTVPVLLQIISG 358
Query: 227 LKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLS 285
+ NA L SG VY L N +++ A
Sbjct: 359 AQ-----------------------NAQDLLPSGSVYSLPSNADIEISFPATAAAPGAPH 395
Query: 286 EIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGA 345
+HLHGH F V+ D A +RF DNPG
Sbjct: 396 P---FHLHGHAFAVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFRTDNPGP 448
Query: 346 WAFHCHIEPHFHIGMGVVLALGVETVGN 373
W HCHI+ H G VV A + V +
Sbjct: 449 WFLHCHIDFHLEAGFAVVFAEDIPDVAS 476
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 126/368 (34%), Gaps = 84/368 (22%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G+ A S ++ V K YR R+
Sbjct: 170 LINGKGRAPSDSVAELS------------------VIKVTKGKRYRFRLVSLSCNPNHTF 211
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT 132
+ H + ++E D QP EVD + I++ + YS +L NQ NYWI A
Sbjct: 212 SIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRA--------- 261
Query: 133 PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFHRRL 190
P + + ++ I G+P +P TN +
Sbjct: 262 ------------------------NPNFGNVGFDGGINSAILRYDGAPAVEPTTN---QT 294
Query: 191 TLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP 250
T + N ++ VS +P +P G + + AF+ NG NF PP
Sbjct: 295 TSVKPLNEVDLHPL-----VSTPVPGSPSSGGVDKAINMAFNFNG--SNFFINGASFVPP 347
Query: 251 V------------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 297
A L SG VY+L N ++++ A +HLHGH F
Sbjct: 348 TVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHP---FHLHGHTF 404
Query: 298 WVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 357
V+ D A +RF +NPG W HCHI+ H
Sbjct: 405 AVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTNNPGPWFLHCHIDFHLE 460
Query: 358 IGMGVVLA 365
G VV+A
Sbjct: 461 GGFAVVMA 468
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 125/368 (33%), Gaps = 84/368 (22%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G+ A S ++ V K YR R+
Sbjct: 170 LINGKGRAPSDSVAELS------------------VIKVTKGKRYRFRLVSLSCNPNHTF 211
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT 132
+ H + ++E D QP EVD + I++ + YS +L NQ NYWI A
Sbjct: 212 SIDGHNLTIIEVDSVNSQPLEVDSIQIFAAQRYSFVLDANQAVD-NYWIRA--------- 261
Query: 133 PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFHRRL 190
P + + ++ I G+P +P TN +
Sbjct: 262 ------------------------NPNFGNVGFDGGINSAILRYDGAPAVEPTTN---QT 294
Query: 191 TLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP 250
T + N ++ VS +P P G + + AF+ NG NF PP
Sbjct: 295 TSVKPLNEVDLHPL-----VSTPVPGAPSSGGVDKAINMAFNFNG--SNFFINGASFVPP 347
Query: 251 V------------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHGHDF 297
A L SG VY+L N ++++ A +HLHGH F
Sbjct: 348 TVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHP---FHLHGHTF 404
Query: 298 WVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFH 357
V+ D A +RF +NPG W HCHI+ H
Sbjct: 405 AVVRSAGSTVYNYDNPIFRDVVSTGTPAA----GDNVTIRFDTNNPGPWFLHCHIDFHLE 460
Query: 358 IGMGVVLA 365
G VV+A
Sbjct: 461 GGFAVVMA 468
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 131/375 (34%), Gaps = 86/375 (22%)
Query: 13 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXX 72
LING+G+ +A S ++ V K R R+
Sbjct: 170 LINGKGRAPSDTSAELS------------------VIKVTKGKRXRFRLVSLSCDPNFTF 211
Query: 73 XVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPAT 132
+ H + ++E D + QP VD + I++ + YS +L NQ NYWI A
Sbjct: 212 SIDGHNLTIIEVDSSNSQPLSVDSIQIFAAQRYSFVLNANQAVD-NYWIRA--------- 261
Query: 133 PPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFHRRL 190
P + + + ++ I G+P +P TN +
Sbjct: 262 ------------------------NPNFGNVGFNGGINSAILRYDGAPAVEPTTN---QT 294
Query: 191 TLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPP 250
T + N +N VS +P +P G + + AF+ NG F N + P
Sbjct: 295 TSVKPLNEVNLHPL-----VSTPVPGSPSSGGVDKAINMAFNFNG-SNFFINGASFVPPS 348
Query: 251 VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSEIH--------------PWHLHGHD 296
V + SG T D++ + + P+ + I P+HLHGH
Sbjct: 349 VPVLLQILSGA-----QTAQDLLPSGSVXVLPSNASIEISFPATAAAPGAPHPFHLHGHT 403
Query: 297 FWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEPHF 356
F V+ R G A +RF+ +NPG W HCHI+ H
Sbjct: 404 FAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLTNNPGPWFLHCHIDFHL 459
Query: 357 HIGMGVVLALGVETV 371
G VV A V V
Sbjct: 460 EGGFAVVQAEDVPDV 474
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 118/328 (35%), Gaps = 47/328 (14%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLT 110
+ P K +RLRI + H M V+ D V F V + + G+ Y V +
Sbjct: 260 LTPGKRHRLRIINTSTDNHFQVSLVGHNMTVIATDMVPVNAFTVSSLFLAVGQRYDVTID 319
Query: 111 TNQDPSYNYWISA----GVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHS 166
N P NYW + G+ G PA + Y A+ +P P +H
Sbjct: 320 ANS-PVGNYWFNVTFGDGLCGSSNNKFPA-AIFRYQGAPAT-LPTDQGLPVP-----NHM 371
Query: 167 KSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYG 226
+ + ++ P NF +R NT+ V+L + TP
Sbjct: 372 CLDNLNLTPVVTRSAPVNNFVKR-----PSNTLG---------VTLDIGGTPLF------ 411
Query: 227 LKDAFDQNGPPENFSNEYDVMKPPVNANTT--LGSGVYMLGLNTTVDVILQNANAIRPNL 284
+ NG N ++ ++ NT+ + + + L + P +
Sbjct: 412 ---VWKVNGSAINVDWGKPILDYVMSGNTSYPVSDNIVQVDAVDQWTYWLIENDPTNPIV 468
Query: 285 SEIHPWHLHGHDFWVLGRGEGK---------FTKEDEXXXXXXXXXXXXTAVIFPYG-WT 334
S HP HLHGHDF VLGR + F + + P G W
Sbjct: 469 SLPHPMHLHGHDFLVLGRSPDELPSAGVRHIFDPAKDLPRLKGNNPVRRDVTMLPAGGWL 528
Query: 335 ALRFVADNPGAWAFHCHIEPHFHIGMGV 362
L F DNPGAW FHCHI H G+ V
Sbjct: 529 LLAFKTDNPGAWLFHCHIAWHVSGGLSV 556
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 124/377 (32%), Gaps = 84/377 (22%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
+ LING+G+ +A S ++ V K R R+
Sbjct: 167 DSTLINGKGRAPSDSSAQLS------------------VVSVTKGKRXRFRLVSLSCDPN 208
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRK 129
+ H ++E D QP D + I++ + YS L NQ NYWI A
Sbjct: 209 FTFSIDGHNNTIIETDSVNSQPLNTDSIQIFAAQRYSFTLNANQAVD-NYWIRA------ 261
Query: 130 PATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSP--KPPTNFH 187
P + + + ++ I G+P +P TN
Sbjct: 262 ---------------------------NPNFGNVGFNGGINSAILRYDGAPAVEPTTNQS 294
Query: 188 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 247
LN N ++ VS +P +P G + + AF+ NG NF
Sbjct: 295 TSTQPLNETN-LHPL-------VSTPVPGSPAAGGVDKAINMAFNFNG--SNFFINGASF 344
Query: 248 KPPV------------NANTTLGSG-VYMLGLNTTVDVILQNANAIRPNLSEIHPWHLHG 294
PP A L SG V L N ++++ A +HLHG
Sbjct: 345 TPPSVPVLLQILSGAQTAQDLLPSGSVXTLPSNASIEISFPATAAAPGAPHP---FHLHG 401
Query: 295 HDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWAFHCHIEP 354
H F V+ R G A +RF+ +NPG W HCHI+
Sbjct: 402 HVFAVV-RSAGSTVYNYSNPIFRDVVSTGTPAA---GDNVTIRFLTNNPGPWFLHCHIDF 457
Query: 355 HFHIGMGVVLALGVETV 371
H G VV A V V
Sbjct: 458 HLEGGFAVVQAEDVPDV 474
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 346
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 347 AFHCHIEPHFHIGMGV 362
HCHI H GM +
Sbjct: 523 LLHCHIAWHASEGMAM 538
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
+ L+NG F+CS S + + G ++ ++ V+ K YRLR+
Sbjct: 226 ENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTFVEGTK-YRLRLINVGIDSH 275
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 121
+ NH + V+ D + P+ D + I G+ Y V++ N + NYWI
Sbjct: 276 FEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWI 326
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFP-YGWTALRFVADNPGAW 346
HP HLHGHDF+++ + F ++ P G+ A+ F DNPG+W
Sbjct: 463 HPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSW 522
Query: 347 AFHCHIEPHFHIGMGV 362
HCHI H G+ +
Sbjct: 523 LLHCHIAWHASEGLAM 538
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 10 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXX 69
+ L+NG F+CS S + + G ++ ++ V+ K YRLR+
Sbjct: 226 ENTLMNGTNTFDCS-------ASTDPNCVGGGKKF--ELTFVEGTK-YRLRLINVGIDSH 275
Query: 70 XXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWI 121
+ NH + V+ D + P+ D + I G+ Y V++ N + NYWI
Sbjct: 276 FEFAIDNHTLTVIANDLVPIVPYTTDTLLIGIGQRYDVIVEANA-AADNYWI 326
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 283 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 342
N ++H H HGH F RG IFP + L
Sbjct: 970 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1013
Query: 343 PGAWAFHCHIEPHFHIGM 360
PG W HCH+ H H GM
Sbjct: 1014 PGIWLLHCHVTDHIHAGM 1031
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 16/78 (20%)
Query: 283 NLSEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADN 342
N ++H H HGH F RG IFP + L
Sbjct: 989 NEIDLHTVHFHGHSFQYKHRG----------------VYSSDVFDIFPGTYQTLEMFPRT 1032
Query: 343 PGAWAFHCHIEPHFHIGM 360
PG W HCH+ H H GM
Sbjct: 1033 PGIWLLHCHVTDHIHAGM 1050
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 288 HPWHLHGHDFWVLG-RGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 346
HP+H+HG F ++ + GK K + T + P LR D G
Sbjct: 407 HPFHIHGTQFELISSKLNGKVQKAE-------FRALRDTINVRPNEELRLRMKQDFKGLR 459
Query: 347 AFHCHIEPHFHIGM 360
+HCHI H +GM
Sbjct: 460 MYHCHILEHEDLGM 473
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 51 VQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYV-QPFEVDDMDIYSGESYSVLL 109
V T RLR+ +++H + ++ ADG ++ +P EV ++ + GE VL+
Sbjct: 191 VAQKATLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPLEVSELLLAPGERAEVLV 250
Query: 110 TTNQDPSY 117
++ +
Sbjct: 251 RLRKEGRF 258
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 347
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 194 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 248
Query: 348 FHCHIEPHFHIGMGVVLALGVETVGNIPN 376
+HCH++ H +GM V L L + G IP
Sbjct: 249 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 276
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 347
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 193 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 247
Query: 348 FHCHIEPHFHIGMGVVLALGVETVGNIPN 376
+HCH++ H +GM V L L + G IP
Sbjct: 248 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 275
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 347
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 231 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 285
Query: 348 FHCHIEPHFHIGMGVVLALGVETVGNIPN 376
+HCH++ H +GM V L L + G IP
Sbjct: 286 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 313
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 347
H +H+HGH W R G T D+ T +G+ + GAW
Sbjct: 190 HTFHMHGHR-WADNR-TGILTGPDDPSRVIDNKI---TGPADSFGFQIIAGEGVGAGAWM 244
Query: 348 FHCHIEPHFHIGMGVVLALGVETVGNIPN 376
+HCH++ H +GM V L L + G IP
Sbjct: 245 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 272
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 288 HPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAWA 347
H +HLHGH W R G T D+ +G+ + GAW
Sbjct: 196 HTFHLHGHR-WADNR-TGMLTGPDDPSQVIDNKI---CGPADSFGFQVIAGEGVGAGAWM 250
Query: 348 FHCHIEPHFHIGMGVVLALGVETVGNIPN 376
+HCH++ H +GM V L L + G IP
Sbjct: 251 YHCHVQSHSDMGM-VGLFLVKKPDGTIPG 278
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 285 SEIHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPG 344
S H +HLHGH W+ R + ++ D + +G+ + PG
Sbjct: 209 SNFHTFHLHGHR-WLDNRTGMRTSEYDPSPLIDIKDLNPGVS----FGFQVIAGEGVGPG 263
Query: 345 AWAFHCHIEPHFHIGM 360
W +HCH++ H +GM
Sbjct: 264 MWMYHCHVQNHSDMGM 279
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 216 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 262
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 216 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 262
P Y I G D+ +Q P + E DVM P V+ +TL G Y
Sbjct: 159 PAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGGKY 205
>pdb|1WSA|A Chain A, Structure Of L-Asparaginase Ii Precursor
pdb|1WSA|B Chain B, Structure Of L-Asparaginase Ii Precursor
Length = 330
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 188 RRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVM 247
R T LNT +N F P T +G++ YG + F Q+ P ++E+D+
Sbjct: 162 REATKLNT-TAVNAFAS----------PNTGKIGTVYYGKVEYFTQSVRPHTLASEFDIS 210
Query: 248 K 248
K
Sbjct: 211 K 211
>pdb|3UKA|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKF|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
Length = 509
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDH-------SFXLGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 442 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 489
Query: 393 QN 394
QN
Sbjct: 490 QN 491
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate Udp-Galp
In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 333 WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPK 392
W+ RF G+W + + H + LGVE V NI N A+ L F+N +
Sbjct: 446 WSRGRF-----GSWRYEVGNQDHSFM-------LGVEAVDNIVNGAVELTLNYPDFVNGR 493
Query: 393 QN 394
QN
Sbjct: 494 QN 495
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 216 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 262
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSVGSELDVMAPGVSIQSTLPGGTY 214
>pdb|2R7E|B Chain B, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 770
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 16/80 (20%)
Query: 287 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 346
IH H GH F V + E K + ++P + + + G W
Sbjct: 391 IHSIHFSGHVFTVRKKEEYKMALYN----------------LYPGVFETVEMLPSKAGIW 434
Query: 347 AFHCHIEPHFHIGMGVVLAL 366
C I H H GM + +
Sbjct: 435 RVECLIGEHLHAGMSTLFLV 454
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 325 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 367
T +FP+ + +NPG W CH + GM +L +
Sbjct: 667 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 709
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 325 TAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALG 367
T +FP+ + +NPG W CH + GM +L +
Sbjct: 668 TLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVS 710
>pdb|3CDZ|B Chain B, Crystal Structure Of Human Factor Viii
Length = 684
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 27/80 (33%), Gaps = 16/80 (20%)
Query: 287 IHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXXTAVIFPYGWTALRFVADNPGAW 346
IH H GH F V + E K + ++P + + + G W
Sbjct: 305 IHSIHFSGHVFTVRKKEEYKMALYN----------------LYPGVFETVEMLPSKAGIW 348
Query: 347 AFHCHIEPHFHIGMGVVLAL 366
C I H H GM + +
Sbjct: 349 RVECLIGEHLHAGMSTLFLV 368
>pdb|4G1G|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1G|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1L|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|A Chain A, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
pdb|4G1O|B Chain B, Crystal Structure Of Newcastle Disease Virus Matrix
Protein
Length = 364
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 245 DVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSE 286
DV K P A GS +Y L LN T+DV + + + +LS+
Sbjct: 185 DVYKIPTAALKVSGSSLYNLALNVTIDVEVDPKSPLVKSLSK 226
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 216 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 262
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSANQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 216 PTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLGSGVY 262
P Y +I G ++ +Q + +E DVM P V+ +TL G Y
Sbjct: 168 PAKYPSTIAVGAVNSSNQRASFSSAGSELDVMAPGVSIQSTLPGGTY 214
>pdb|3NVS|A Chain A, 1.02 Angstrom Resolution Crystal Structure Of
3-Phosphoshikimate 1- Carboxyvinyltransferase From
Vibrio Cholerae In Complex With Shikimate-3-Phosphate
(Partially Photolyzed) And Glyphosate
Length = 450
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 139 LNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNT 198
L + + + L P + + SKS SN+ L T L + ++
Sbjct: 18 LYFQSNAMESLTLQPIELISGEVNLPGSKSVSNRALLLAALASGTTRLTNLLDSDDIRHM 77
Query: 199 INGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNEYDVMKPPVNANTTLG 258
+N TK +N L ++ GL AF P E F P+ A LG
Sbjct: 78 LNALTKLGVN---YRLSADKTTCEVE-GLGQAFHTTQPLELFLGNAGTAMRPLAAALCLG 133
Query: 259 SGVYML 264
G Y+L
Sbjct: 134 QGDYVL 139
>pdb|1ZO2|A Chain A, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
pdb|1ZO2|B Chain B, Structure Of Nuclear Transport Factor 2 (Ntf2) From
Cryptosporidium Parvum
Length = 129
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 184 TNFHRRLTLLNTQNTINGFTKWAINNVSLTLPPTPYLGSIKYGLKDAFDQNGPPENFSNE 243
T F + ++N N++N F + + P+P GSI + D +G P FS
Sbjct: 48 TQFQGQANIVNKFNSLN-FQRVQFEITRVDCQPSPNNGSIVFVTGDVRIDDGQPLKFSQV 106
Query: 244 YDVMKPPVNANTTLGSGVYMLGL 266
+++M P N + + ++ L L
Sbjct: 107 FNLM-PSGNGGFMIFNDLFRLNL 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,761,079
Number of Sequences: 62578
Number of extensions: 542364
Number of successful extensions: 1287
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1171
Number of HSP's gapped (non-prelim): 88
length of query: 394
length of database: 14,973,337
effective HSP length: 101
effective length of query: 293
effective length of database: 8,652,959
effective search space: 2535316987
effective search space used: 2535316987
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)