Query 016154
Match_columns 394
No_of_seqs 189 out of 2022
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 08:48:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1orq_C Potassium channel; volt 100.0 1.3E-27 4.4E-32 211.2 18.4 207 62-304 9-220 (223)
2 2r9r_B Paddle chimera voltage 99.9 4E-26 1.4E-30 224.0 13.0 298 50-385 170-503 (514)
3 3beh_A MLL3241 protein; transm 99.9 4.4E-25 1.5E-29 208.8 13.0 211 53-304 3-216 (355)
4 2a9h_A Voltage-gated potassium 99.8 1.9E-19 6.5E-24 147.6 11.7 90 208-313 59-148 (155)
5 2ih3_C Voltage-gated potassium 99.7 9.9E-18 3.4E-22 132.3 11.8 62 247-308 59-120 (122)
6 3rvy_A ION transport protein; 99.7 7.6E-18 2.6E-22 154.0 9.1 207 61-308 30-245 (285)
7 4h33_A LMO2059 protein; bilaye 99.7 1.4E-17 5E-22 134.0 9.4 93 249-341 43-135 (137)
8 3vou_A ION transport 2 domain 99.7 3.1E-16 1.1E-20 128.4 15.4 113 201-335 26-148 (148)
9 3eff_K Voltage-gated potassium 99.6 1.5E-15 5.1E-20 123.1 12.5 92 200-307 7-98 (139)
10 2ptm_A Hyperpolarization-activ 99.6 1.8E-15 6.3E-20 130.5 10.9 90 304-393 2-91 (198)
11 3ukn_A Novel protein similar t 99.6 2.6E-16 8.8E-21 137.5 4.4 94 299-393 1-95 (212)
12 3bpz_A Potassium/sodium hyperp 99.6 2.6E-15 8.8E-20 130.1 10.1 90 304-393 3-92 (202)
13 2k1e_A Water soluble analogue 99.6 2.8E-15 9.5E-20 114.6 5.6 93 200-308 7-99 (103)
14 2q67_A Potassium channel prote 99.5 2E-13 7E-18 106.0 12.6 61 249-309 49-109 (114)
15 3ouf_A Potassium channel prote 99.4 1.1E-12 3.9E-17 98.6 11.2 82 202-305 7-88 (97)
16 3ldc_A Calcium-gated potassium 99.4 1.2E-12 4.2E-17 95.2 10.4 54 249-302 28-81 (82)
17 4dxw_A Navrh, ION transport pr 99.3 2E-11 6.9E-16 107.6 12.9 207 61-305 12-226 (229)
18 3pjs_K KCSA, voltage-gated pot 99.3 2.7E-13 9.4E-18 112.9 0.7 66 246-311 64-129 (166)
19 1xl4_A Inward rectifier potass 99.2 2.1E-11 7.3E-16 110.8 10.0 84 206-305 55-138 (301)
20 1p7b_A Integral membrane chann 99.1 6.1E-11 2.1E-15 108.9 7.8 59 248-306 95-153 (333)
21 3um7_A Potassium channel subfa 99.1 1E-09 3.6E-14 99.2 14.8 77 249-331 115-191 (309)
22 2qks_A KIR3.1-prokaryotic KIR 99.1 3.7E-10 1.3E-14 103.4 12.0 58 249-306 78-135 (321)
23 3um7_A Potassium channel subfa 99.0 1.8E-09 6.2E-14 97.7 9.0 60 249-308 224-289 (309)
24 3sya_A G protein-activated inw 98.9 6.2E-09 2.1E-13 95.4 12.5 98 203-307 48-151 (340)
25 4gx0_A TRKA domain protein; me 98.9 3.9E-09 1.4E-13 105.5 12.2 87 199-302 18-105 (565)
26 1ors_C Potassium channel; volt 98.9 9.2E-09 3.1E-13 81.9 11.4 110 61-193 6-117 (132)
27 2kyh_A KVAP, voltage-gated pot 98.9 1E-08 3.4E-13 82.9 10.9 113 62-197 22-136 (147)
28 3ukm_A Potassium channel subfa 98.8 4.9E-09 1.7E-13 93.4 7.6 56 249-304 93-148 (280)
29 3ukm_A Potassium channel subfa 98.8 7.6E-09 2.6E-13 92.2 8.7 56 249-304 201-263 (280)
30 3spc_A Inward-rectifier K+ cha 98.8 1.8E-08 6.1E-13 92.4 10.4 98 202-306 49-153 (343)
31 1lnq_A MTHK channels, potassiu 98.6 5.1E-09 1.7E-13 97.7 -1.2 58 249-306 45-102 (336)
32 3kg2_A Glutamate receptor 2; I 85.7 0.88 3E-05 46.9 5.8 56 248-304 562-617 (823)
33 4dxw_A Navrh, ION transport pr 76.8 6.1 0.00021 33.5 7.0 16 174-189 102-117 (229)
34 4f4l_A ION transport protein; 69.5 16 0.00056 27.1 7.0 58 246-303 35-98 (112)
35 3shr_A CGMP-dependent protein 56.8 2.8 9.6E-05 37.1 0.6 42 352-393 18-59 (299)
36 1orq_C Potassium channel; volt 55.7 22 0.00075 29.8 6.1 16 167-182 99-114 (223)
37 2lh0_A Histone chaperone RTT10 46.1 11 0.00037 25.3 2.0 14 354-367 8-21 (70)
38 3rvy_A ION transport protein; 39.5 91 0.0031 27.0 7.8 28 170-197 113-140 (285)
39 2db7_A Hairy/enhancer-OF-split 34.4 87 0.003 20.5 5.0 35 310-344 22-59 (64)
40 1ors_C Potassium channel; volt 31.5 37 0.0012 25.9 3.3 13 173-185 94-106 (132)
41 2kwv_A RAD30 homolog B, DNA po 30.2 13 0.00045 22.5 0.4 18 351-368 17-34 (48)
42 2rnn_A E3 SUMO-protein ligase 28.8 49 0.0017 24.5 3.3 30 315-344 41-75 (114)
43 3beh_A MLL3241 protein; transm 27.2 3.3E+02 0.011 24.1 10.0 21 165-185 98-118 (355)
44 2r9r_B Paddle chimera voltage 26.7 51 0.0017 31.7 4.1 12 174-185 309-320 (514)
45 3idb_B CAMP-dependent protein 26.4 17 0.00059 28.3 0.6 29 365-393 30-58 (161)
46 3pjz_A Potassium uptake protei 25.7 1.1E+02 0.0038 29.2 6.1 44 246-289 303-348 (494)
47 2kyh_A KVAP, voltage-gated pot 25.0 75 0.0026 24.7 4.1 15 171-185 107-121 (147)
48 3gyd_A CNMP-BD protein, cyclic 24.6 27 0.00091 28.1 1.4 27 367-393 33-59 (187)
49 2lcm_A Voltage-dependent N-typ 23.0 57 0.002 17.4 2.1 19 169-187 5-23 (28)
50 3pna_A CAMP-dependent protein 21.5 39 0.0013 25.9 1.8 25 369-393 34-58 (154)
51 3ghg_A Fibrinogen alpha chain; 21.4 3.3E+02 0.011 26.0 8.1 59 305-366 55-119 (562)
52 2do1_A Nuclear protein HCC-1; 21.3 70 0.0024 20.3 2.6 28 315-342 14-46 (55)
No 1
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=99.95 E-value=1.3e-27 Score=211.20 Aligned_cols=207 Identities=21% Similarity=0.282 Sum_probs=153.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhhh--cccCcccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhcccc
Q 016154 62 WWQTFLVVLVVYSAWASPFELA--FRKAATGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRLW 139 (394)
Q Consensus 62 ~w~~~~~~~~~~~~~~~p~~~~--f~~~~~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~~ 139 (394)
.||.+++++++++.+.++++.. ++.+....+..+|.+++++|.+|+++|+.++ + ++ ++|+|+
T Consensus 9 ~f~~~i~~lil~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~iF~~e~~lr~~~~------~----~~----~~y~~~-- 72 (223)
T 1orq_C 9 LVELGVSYAALLSVIVVVVECTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKS------G----DP----AGYVKK-- 72 (223)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHHHHHHTT------S----CH----HHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccChhhhhHHHHHHHHHHHHHHHHHHHHHccc------c----cH----HHHHHH--
Confidence 5899999999999998877753 4444466788999999999999999999987 1 22 799998
Q ss_pred ccccccccccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHH---hhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 016154 140 FTMDVASTLPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLE---KDIRFTYFITRLSKLICVTLFAVHSAG 216 (394)
Q Consensus 140 f~~Dlis~lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~---~~~~~~~~~~~l~~~~~~~l~~~h~~a 216 (394)
+++|+++++|++....... +. .....+|.+|++|+.|+.+..+... +.........++..++..++++.|+.+
T Consensus 73 ~iiDllailP~~~~~~~~~-~~---~~~~~lr~lRllRllR~~r~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 148 (223)
T 1orq_C 73 TLYEIPALVPAGLLALIEG-HL---AGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGA 148 (223)
T ss_dssp HHHHCTTHHHHHHHHHHHH-HH---HTTTCHHHHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhc-ch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999987653111 10 1122445555555555555544211 111111111346667778888899999
Q ss_pred HHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 016154 217 CFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIG 296 (394)
Q Consensus 217 c~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~ 296 (394)
|+++.++.. .+++...+|.+|+||+++|+||+||||+.|.|+.|++++++.+++|+.++|+++|
T Consensus 149 ~~~~~~e~~----------------~~~~~~~~~~~s~y~~~~t~tTvGyGdi~P~t~~~~~~~~~~~~~G~~~~~~~i~ 212 (223)
T 1orq_C 149 FAIYIVEYP----------------DPNSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIG 212 (223)
T ss_dssp HHHHHTTSS----------------STTCSCCSHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC----------------CcCCCcCcchhHHHhHHhHHhccCCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999987521 1122345799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 016154 297 NMTNLIVH 304 (394)
Q Consensus 297 ~i~~~~~~ 304 (394)
.+++.+++
T Consensus 213 ~i~~~~~~ 220 (223)
T 1orq_C 213 TVSNMFQK 220 (223)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988765
No 2
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.93 E-value=4e-26 Score=224.04 Aligned_cols=298 Identities=15% Similarity=0.202 Sum_probs=161.9
Q ss_pred CeEEcCC-ChhHHHHHHHHHHHHHHHHHHHhHhhh--cccC--------------------------cccchHHHHHHHH
Q 016154 50 KYVIAPY-DYRYRWWQTFLVVLVVYSAWASPFELA--FRKA--------------------------ATGSLLIVDLVVD 100 (394)
Q Consensus 50 ~~ii~P~-s~~~~~w~~~~~~~~~~~~~~~p~~~~--f~~~--------------------------~~~~~~~~~~~~~ 100 (394)
..+-+|. |...++|+.+++++++++++.+.++.. +... ....+.++|.++.
T Consensus 170 ~l~e~p~sS~~a~~f~~~~i~~Illsii~~~leT~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ie~i~~ 249 (514)
T 2r9r_B 170 LLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGGGVTFHTYSQSTIGYQQSTSFTDPFFIVETLCI 249 (514)
T ss_dssp HTTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHTCSTTTTSCCCCHHHHHHHHHSSCCCTTCCCHHHHHHHHHH
T ss_pred HHhcCCCCcHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccccccccccccccccchhhhHHHHHHHHHH
Confidence 3344676 467889999999999999988877642 2111 2346788999999
Q ss_pred HHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhccccccccccccccHHHHHHHhcCCcCC---CcchhhhhhHHHHh
Q 016154 101 FFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRLWFTMDVASTLPFQFIYRIFTGQLHD---GRVFGFLNLLRLWR 177 (394)
Q Consensus 101 ~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~~f~~Dlis~lP~~~~~~~~~~~~~~---~~~~~~l~l~rllR 177 (394)
++|.+|+++|+.++ + ++ ++|++++|+++|+++++|+++........... .....+++++|++|
T Consensus 250 ~iFtiE~ilR~~~~------~----~k----~~Y~ks~wniiDli~iip~~i~l~~~~~~~~~~~~~~~~~~lrvlRllR 315 (514)
T 2r9r_B 250 IWFSFEFLVRFFAC------P----SK----AGFFTNIMNIIDIVAIIPYYVTIFLTESNKSVLQFQNVRRVVQIFRIMR 315 (514)
T ss_dssp HHHHHHHHHHHHHS------S----CS----SSSTTSHHHHHHHHTTHHHHHHHHHHHTSCSHHHHHTTHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHhC------C----cH----HHHHhchhHHHHHHHHHHHHHHHHhhhccccchhhhhHHHHHHHHHHHH
Confidence 99999999999876 2 11 58999989999999999998765443211000 01134555566666
Q ss_pred HHhHHHHHHHHHhhhhhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHH
Q 016154 178 LRRVGELFTRLEKDIRFTY----FITRLSKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYS 253 (394)
Q Consensus 178 l~ri~~~~~~~~~~~~~~~----~~~~l~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~s 253 (394)
++|+.++.+.......+.. ....+..+++.+++.++++||+.|.... ..+.+.+..|.+|
T Consensus 316 vlRilkL~r~~~~l~~l~~tl~~s~~~l~~ll~~l~i~~~if~~~~~~~e~----------------~~~~~~F~s~~~a 379 (514)
T 2r9r_B 316 ILRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEA----------------DERDSQFPSIPDA 379 (514)
T ss_dssp GGGGGGGGGSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHT----------------TCTTCSCSSHHHH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhheeec----------------cCCCccccchhhh
Confidence 6555555443332222111 1223444555566667778888776641 1123345679999
Q ss_pred HHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhCCCCHHHH
Q 016154 254 IYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVRTLFMRNAINEILRYGSKNRLPEGLR 333 (394)
Q Consensus 254 ly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~i~~~m~~~~l~~~l~ 333 (394)
+||+++|+||+||||+.|.+..+++++++++++|++++++++|.+.+.+.....+++ .++..+.-++++.....|....
T Consensus 380 ~y~~~vT~TTvGYGDi~P~t~~gr~f~~~~~l~G~~~l~l~iavI~~~f~~~~~~~~-~~~~~~l~~h~iicg~~~~~~~ 458 (514)
T 2r9r_B 380 FWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRET-EGEEQAQYLQVTSSPKIPSSPD 458 (514)
T ss_dssp HHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHC-----------------------
T ss_pred hheeeeEEEecccCCCCCCCcchHhhehhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCCEEEeCCCccchh
Confidence 999999999999999999999999999999999999999999999987766554322 1222222233443333333221
Q ss_pred HHHHHHHHHHHhhccccHHHHHhhCCHHHHHHHHHHHHHhhhhcccCCcCCC
Q 016154 334 EQMLAHMQLRFKTAELQQEEVLEDLPKAIRSSISQHLFRGTVEKTYLFQGVS 385 (394)
Q Consensus 334 ~rv~~y~~~~~~~~~~~~~~il~~Lp~~Lr~ei~~~~~~~~l~~~~~F~~~~ 385 (394)
.+ + .+.+...++.-..+|.+.++.++...-....-...+-..+++
T Consensus 459 l~--~-----~~~~~~~~~s~~~el~e~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (514)
T 2r9r_B 459 LK--K-----SRSASTISKSDYMEIQEGVNNSNEDFREENLKTANSTLANTN 503 (514)
T ss_dssp ----------------------------------------------------
T ss_pred HH--h-----cccCCCcccccccccccccccccccccccccccCCccccccC
Confidence 11 1 122234455666888888888887766555544444444333
No 3
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=99.92 E-value=4.4e-25 Score=208.76 Aligned_cols=211 Identities=14% Similarity=0.150 Sum_probs=143.4
Q ss_pred EcCCChhHHHHHHHHHHHHHHHHHHHhHhhhcccCc--ccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHH
Q 016154 53 IAPYDYRYRWWQTFLVVLVVYSAWASPFELAFRKAA--TGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKI 130 (394)
Q Consensus 53 i~P~s~~~~~w~~~~~~~~~~~~~~~p~~~~f~~~~--~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i 130 (394)
+.|+|+. ++.+++++++.+++.+..+...+... ...+..++.++.++|++|+++++... ++ +
T Consensus 3 ~~p~s~~---f~~~~~~~i~ls~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~f~~e~~~r~~~~---~~-------~--- 66 (355)
T 3beh_A 3 VLPFLRI---YAPLNAVLAAPGLLAVAALTIPDMSGRSRLALAALLAVIWGAYLLQLAATLLKR---RA-------G--- 66 (355)
T ss_dssp ----CCS---SSSHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CS-------C---
T ss_pred CCchhHH---HHHHHHHHHHHHHHHHHHHcccchhhhHHHHHHHHHhHHHHHHHHHHHHhcccc---cc-------c---
Confidence 4677774 46666666777777776664322111 12244556666667899999998533 11 0
Q ss_pred HHHhhcccccccccccc-ccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHHhhhhhhHHHHHHHHHHHHHH
Q 016154 131 ALRYVTRLWFTMDVAST-LPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLEKDIRFTYFITRLSKLICVTL 209 (394)
Q Consensus 131 ~~~Yl~~~~f~~Dlis~-lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~~~~~~~~~~~~l~~~~~~~l 209 (394)
..|.+++++++|++++ +|+.... .. .. ...+++|++|++|+.|..+.++.+...... ....+...+..++
T Consensus 67 -~~~~~~~~~i~Dl~~i~~p~~~~~--~~-~~---~~~r~lr~~R~lrl~r~~~~~~~l~~~l~~--~~~~l~~~~~~~~ 137 (355)
T 3beh_A 67 -VVRDRTPKIAIDVLAVLVPLAAFL--LD-GS---PDWSLYCAVWLLKPLRDSTFFPVLGRVLAN--EARNLIGVTTLFG 137 (355)
T ss_dssp -SSCCCHHHHHHHHHHHHHHHHHHH--SC-CS---GGGGGGGGGGGSHHHHTCSSHHHHHHHHHH--THHHHHHHHHHHH
T ss_pred -ceeccCcchHHHHHHHHHHHHHHH--hc-cc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 3566777999999998 6887643 11 11 334455555555555544444444333221 1245667777788
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHH
Q 016154 210 FAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIG 289 (394)
Q Consensus 210 ~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~ 289 (394)
+++|++||++|.++.. .+++.+..|.+|+||+++|+||+||||+.|.|+.|++++++++++|++
T Consensus 138 ~~~~~~a~~~~~~e~~----------------~~~~~f~~~~~s~y~~~~t~ttvGygd~~p~t~~~~~~~~~~~~~g~~ 201 (355)
T 3beh_A 138 VVLFAVALAAYVIERD----------------IQPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIG 201 (355)
T ss_dssp HHHHHHHHHHHHHHTT----------------TCHHHHSSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcC----------------CCCcccccHHHHHHHHHhheeecCCCCCCCCChhHHHHHHHHHHHHHH
Confidence 8899999999988631 123345679999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 016154 290 LTAYIIGNMTNLIVH 304 (394)
Q Consensus 290 ~~a~~i~~i~~~~~~ 304 (394)
++++++|.+++.+.+
T Consensus 202 ~~~~~~~~i~~~~~~ 216 (355)
T 3beh_A 202 IFGLWAGILATGFYQ 216 (355)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999887654
No 4
>2a9h_A Voltage-gated potassium channel; potassium channel, KCSA, structure, membrane protein, metal transport; HET: PCA; NMR {Streptomyces lividans} SCOP: f.14.1.1
Probab=99.80 E-value=1.9e-19 Score=147.64 Aligned_cols=90 Identities=18% Similarity=0.262 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHH
Q 016154 208 TLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFN 287 (394)
Q Consensus 208 ~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g 287 (394)
+++++-+.++++|.++.. .+++....|.+|+||+++|+||+||||+.|.|+.+++++++.+++|
T Consensus 59 ~~~~i~~~a~~~~~~E~~----------------~~~~~~~s~~~a~y~s~vTltTVGYGDi~P~t~~gr~~~~~~~l~G 122 (155)
T 2a9h_A 59 LVIVLLAGSYLAVLAERG----------------APGAALISYPDALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAG 122 (155)
T ss_dssp HHHHHHHHHHHHHHHHTT----------------SSCSSTTSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcc----------------CCCCccCcccceeheeeeeeecccCCCCCCCChhHHHHHHHHHHHH
Confidence 344445567777777521 1233445799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhhHHHHH
Q 016154 288 IGLTAYIIGNMTNLIVHSAVRTLFMR 313 (394)
Q Consensus 288 ~~~~a~~i~~i~~~~~~~~~~~~~~~ 313 (394)
+.++++++|.+++.+.+..+++++..
T Consensus 123 v~~~a~~~~~i~~~~~~~~~~~~~~~ 148 (155)
T 2a9h_A 123 ITSYGLVFAAVATWFVGREQERRGHF 148 (155)
T ss_dssp HHHHHHHHHHHHHHHHSCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988776544433
No 5
>2ih3_C Voltage-gated potassium channel; ION channel D-amino acid semi-synthetic, membrane protein; HET: 1EM; 1.72A {Streptomyces lividans} PDB: 2ih1_C* 1r3j_C* 1k4d_C* 1r3i_C* 1k4c_C* 1r3k_C* 1r3l_C* 2bob_C* 2boc_C* 2hvj_C* 2hvk_C* 2itc_C 2itd_C 3gb7_C* 3iga_C* 1jvm_A 1s5h_C* 3ifx_A* 1j95_A 2jk5_C* ...
Probab=99.75 E-value=9.9e-18 Score=132.30 Aligned_cols=62 Identities=23% Similarity=0.400 Sum_probs=57.3
Q ss_pred hhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhh
Q 016154 247 WLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVR 308 (394)
Q Consensus 247 ~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~ 308 (394)
...|.+|+||+++|+||+||||+.|.|+.+++++++.+++|+.++++.+|.+++.+.+..++
T Consensus 59 ~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~Gi~~~~~~~~~i~~~~~~~~~~ 120 (122)
T 2ih3_C 59 LITYPRALWWACETATTVAYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGREQE 120 (122)
T ss_dssp CCSHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccchhheeeeeeeeecCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45699999999999999999999999999999999999999999999999999998765543
No 6
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=99.72 E-value=7.6e-18 Score=154.04 Aligned_cols=207 Identities=13% Similarity=0.163 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhc--ccCcccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhccc
Q 016154 61 RWWQTFLVVLVVYSAWASPFELAF--RKAATGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRL 138 (394)
Q Consensus 61 ~~w~~~~~~~~~~~~~~~p~~~~f--~~~~~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~ 138 (394)
..++.+++++++++++.+.++..- .......+..+|.++.++|.+|+++++... | ++|++++
T Consensus 30 ~~f~~~i~~li~l~~i~~~~~~~~~~~~~~~~~l~~~e~~~~~iF~~E~~lrl~~~------~----------~~y~~~~ 93 (285)
T 3rvy_A 30 SFFTKFIIYLIVLNGITMGLETSKTFMQSFGVYTTLFNQIVITIFTIEIILRIYVH------R----------ISFFKDP 93 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCTTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTT------G----------GGGGGCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------h----------HHHHcCC
Confidence 367888888888888887766522 112234577899999999999999999876 3 5799999
Q ss_pred cccccccccccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHH
Q 016154 139 WFTMDVASTLPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLEKDIR-FTYFITRLSKLICVTLFAVHSAGC 217 (394)
Q Consensus 139 ~f~~Dlis~lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~h~~ac 217 (394)
|.++|+++++|..+. .. .....+|++|++|++|+.+..+.++.... .....-.+..+++.++++.-.+|+
T Consensus 94 wn~~Dl~~v~~~~i~-----~~----~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~~~~~l~~~~~~~~~~~~~fa~ 164 (285)
T 3rvy_A 94 WSLFDFFVVAISLVP-----TS----SGFEILRVLRVLRLFRLVTAVPQMRKIVSALISVIPGMLSVIALMTLFFYIFAI 164 (285)
T ss_dssp HHHHHHHHHHHHHSC-----SS----SSCTHHHHHGGGGGGHHHHSSTTHHHHHHHHHHHGGGGHHHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHc-----cc----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988886532 11 22334444444444444443332222111 111112334444444444444555
Q ss_pred HHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccC-CCC-CCCchh----HHHHHHHHHHHHHHH
Q 016154 218 FYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYG-DLH-AVNTGE----KVFNMLYMLFNIGLT 291 (394)
Q Consensus 218 ~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGyg-di~-p~t~~e----~i~~i~~~i~g~~~~ 291 (394)
+-+.+.. + .+++.+..+.+|+||+++++||+||| |+. |.+..+ +.++.++++.|.++.
T Consensus 165 ~g~~~f~----~------------~~~~~F~s~~~a~~~~~~~~T~~g~~~di~~p~~~~~~~~~~~f~~~~~i~~~~~l 228 (285)
T 3rvy_A 165 MATQLFG----E------------RFPEWFGTLGESFYTLFQVMTLESWSMGIVRPLMEVYPYAWVFFIPFIFVVTFVMI 228 (285)
T ss_dssp HHHHHHT----T------------TCHHHHSSHHHHHHHHHHHHTTTTCCCCCHHHHHTTCTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC----c------------ccccccCCHHHHHHHHHHHHHhCCCcHHHHHHHHHcCChHHhhHHHHHHHHHHHHH
Confidence 4433321 0 12234678999999999999999999 985 776644 788899999999999
Q ss_pred HHHHHHHHHHHHhchhh
Q 016154 292 AYIIGNMTNLIVHSAVR 308 (394)
Q Consensus 292 a~~i~~i~~~~~~~~~~ 308 (394)
+.++|.+.+-+....++
T Consensus 229 nl~~aii~~~f~~~~~~ 245 (285)
T 3rvy_A 229 NLVVAICVDAMAILNQK 245 (285)
T ss_dssp HHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998887655443
No 7
>4h33_A LMO2059 protein; bilayers, KVLM, lipidic cubic phase (LCP), pore module, ION membrane protein; HET: OLC; 3.10A {Listeria monocytogenes} PDB: 4h37_A
Probab=99.72 E-value=1.4e-17 Score=134.05 Aligned_cols=93 Identities=24% Similarity=0.362 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhCCC
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVRTLFMRNAINEILRYGSKNRL 328 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~i~~~m~~~~l 328 (394)
.|.+|+||+++|+|||||||+.|.|+.|++++++.+++|++++|+++|.+++.+......+.+.++.....+...+..++
T Consensus 43 ~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 122 (137)
T 4h33_A 43 NYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRCKKPTNSSTQRANKITQLISETPDL 122 (137)
T ss_dssp SHHHHHHHHHHHHTTCCCSSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTC--------------------
T ss_pred CHHHHHHHHHHHHHcccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 48999999999999999999999999999999999999999999999999998876665544444333333334445566
Q ss_pred CHHHHHHHHHHHH
Q 016154 329 PEGLREQMLAHMQ 341 (394)
Q Consensus 329 ~~~l~~rv~~y~~ 341 (394)
+++..+.++++.+
T Consensus 123 ~~~~i~~l~~~l~ 135 (137)
T 4h33_A 123 TKEEIAVVEQFLT 135 (137)
T ss_dssp -------------
T ss_pred cHHHHHHHHHHHh
Confidence 6666666766654
No 8
>3vou_A ION transport 2 domain protein, voltage-gated SOD channel; 4-helical bundle, ION channel, membrane, transport protein; 3.20A {Bacillus weihenstephanensis}
Probab=99.70 E-value=3.1e-16 Score=128.37 Aligned_cols=113 Identities=23% Similarity=0.361 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHH
Q 016154 201 LSKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFN 280 (394)
Q Consensus 201 l~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~ 280 (394)
.+..++.++++.++.++++|.... + ..|.+|+||+++|+||+||||+.|.|..+++++
T Consensus 26 ~~~~~~~~~~~~~~~g~~~~~~~e---------------~-------~~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~ 83 (148)
T 3vou_A 26 EFQVLFVLTFLTLTSGTIFYSTVE---------------G-------LRPLDALYFSVVTLTTVGDGNFSPQTDFGKVFT 83 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS---------------C-------CCHHHHHHHHHHHHTTCCCSSCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc---------------C-------CCHHHHHHHHHHHHHccCCCCCCCCCccHHHHH
Confidence 345555666666777777775431 1 158999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH------HHHh----chhhHHHHHHHHHHHHHHHHhCCCCHHHHHH
Q 016154 281 MLYMLFNIGLTAYIIGNMTN------LIVH----SAVRTLFMRNAINEILRYGSKNRLPEGLREQ 335 (394)
Q Consensus 281 i~~~i~g~~~~a~~i~~i~~------~~~~----~~~~~~~~~~~~~~i~~~m~~~~l~~~l~~r 335 (394)
++.+++|+.++++.++.+++ +... .+....+..++++++++++++++.|++|+.|
T Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~i~~~~~~~~~~~~L~~R 148 (148)
T 3vou_A 84 ILYIFIGIGLVFGFIHKLAVNVQLPSILSNRKKETDAYRLEVMEKLEAIEKKLAEHSRQGSLVPR 148 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC
Confidence 99999999999999999886 3332 2444556677899999999999999999875
No 9
>3eff_K Voltage-gated potassium channel; FULL length KCSA, bulge helix, cell membrane, ION transport, ionic channel, membrane, transmembrane; 3.80A {Streptomyces lividans}
Probab=99.64 E-value=1.5e-15 Score=123.05 Aligned_cols=92 Identities=17% Similarity=0.290 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHH
Q 016154 200 RLSKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVF 279 (394)
Q Consensus 200 ~l~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~ 279 (394)
.++..++.++++++..+++++.++.. .+++....|.+|+||+++|+||+||||+.|.|..++++
T Consensus 7 ~~~~~~~~~~~~~~~~a~~~~~~e~~----------------~~~~~~~~~~~a~yf~~~T~tTvGyGd~~P~t~~~r~~ 70 (139)
T 3eff_K 7 AAGAATVLLVIVLLAGSYLAVLAERG----------------APGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRLV 70 (139)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTTSS----------------CTTCCCCCHHHHHHHHHHHHTTCCCSSSCCCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC----------------CCCcccCCHHHHHHHHheeeecccCCCCcCCCcCHHHH
Confidence 34555666666777778888776521 12233456999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 016154 280 NMLYMLFNIGLTAYIIGNMTNLIVHSAV 307 (394)
Q Consensus 280 ~i~~~i~g~~~~a~~i~~i~~~~~~~~~ 307 (394)
+++.+++|+++++++++.+++.+.+..+
T Consensus 71 ~~~~~~~G~~~~~~~~~~i~~~~~~~~~ 98 (139)
T 3eff_K 71 AVVVMVAGITSFGLVTAALATWFVGREQ 98 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988755443
No 10
>2ptm_A Hyperpolarization-activated (IH) channel; ION channel, cyclic nucleotide binding domain, C-linker, CAM SPHCN1, HCN; HET: CMP; 1.93A {Strongylocentrotus purpuratus}
Probab=99.62 E-value=1.8e-15 Score=130.54 Aligned_cols=90 Identities=17% Similarity=0.386 Sum_probs=85.3
Q ss_pred hchhhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccHHHHHhhCCHHHHHHHHHHHHHhhhhcccCCcC
Q 016154 304 HSAVRTLFMRNAINEILRYGSKNRLPEGLREQMLAHMQLRFKTAELQQEEVLEDLPKAIRSSISQHLFRGTVEKTYLFQG 383 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~i~~~m~~~~l~~~l~~rv~~y~~~~~~~~~~~~~~il~~Lp~~Lr~ei~~~~~~~~l~~~~~F~~ 383 (394)
+++.++.+|+++++.+++||+.+++|++++.||++|++|.|+.++.+++++++.||++||+||..+.+.++++++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~i~~~m~~~~i~~~l~~rv~~y~~~~~~~~~~~e~~il~~l~~~Lr~~i~~~~~~~~l~~~~~f~~ 81 (198)
T 2ptm_A 2 AMDSSSRQYREKLKQVEEYMQYRKLPSHLRNKILDYYEYRYRGKMFDERHIFREVSESIRQDVANYNCRDLVASVPFFVG 81 (198)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCSHHHHHHSCHHHHHHHHHHHTHHHHHHCGGGTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcccCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCcchhc
Confidence 56788999999999999999999999999999999999999977899999999999999999999999999999999999
Q ss_pred CCHHHHHhhc
Q 016154 384 VSVDLIAQMV 393 (394)
Q Consensus 384 ~~~~~l~~L~ 393 (394)
+|++++.+|+
T Consensus 82 l~~~~l~~l~ 91 (198)
T 2ptm_A 82 ADSNFVTRVV 91 (198)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999885
No 11
>3ukn_A Novel protein similar to vertebrate potassium VOL channel, subfamily H (EAG-related)...; KCNH, ELK, ERG, CNBD, CNBHD, C-linker, ION channel; 2.20A {Danio rerio} PDB: 3ukt_B 3ukv_B
Probab=99.61 E-value=2.6e-16 Score=137.47 Aligned_cols=94 Identities=20% Similarity=0.358 Sum_probs=80.0
Q ss_pred HHHHHhchhhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc-cccHHHHHhhCCHHHHHHHHHHHHHhhhhc
Q 016154 299 TNLIVHSAVRTLFMRNAINEILRYGSKNRLPEGLREQMLAHMQLRFKTA-ELQQEEVLEDLPKAIRSSISQHLFRGTVEK 377 (394)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~i~~~m~~~~l~~~l~~rv~~y~~~~~~~~-~~~~~~il~~Lp~~Lr~ei~~~~~~~~l~~ 377 (394)
|+++++.++++.+|+++++.+++||+++++|++|+.||++||+|.|+.+ +.+++++++.||++||.||..+++..++ +
T Consensus 1 g~ii~~~~~~~~~~~~~~~~i~~ym~~~~i~~~l~~rv~~y~~~~~~~~~~~~~~~il~~Lp~~L~~~i~~~~~~~l~-~ 79 (212)
T 3ukn_A 1 GAMDQRMYSRRSLYHTRTKDLKDFIRVHRLPKALAQRMLECFQTTWSVNNGIDVSELLKDFPDELRADIAMHLNKELL-Q 79 (212)
T ss_dssp -----------CHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCTGGGCCCCCTTTTSCHHHHHHHHTTCCCGGG-G
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHcCHHHHHHHHHHHHHHHH-h
Confidence 4678899999999999999999999999999999999999999999976 8899999999999999999999999988 8
Q ss_pred ccCCcCCCHHHHHhhc
Q 016154 378 TYLFQGVSVDLIAQMV 393 (394)
Q Consensus 378 ~~~F~~~~~~~l~~L~ 393 (394)
+|+|+++|++++++|+
T Consensus 80 ~~~f~~l~~~~l~~l~ 95 (212)
T 3ukn_A 80 LPLFESASRGCLRSLS 95 (212)
T ss_dssp SGGGTTCCHHHHHHHH
T ss_pred cHHhhcCCHHHHHHHH
Confidence 9999999999999885
No 12
>3bpz_A Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; CNBD, C-linker, pacemaker, HCN, HCN2, CAP, PKA, CAMP, ION channel; HET: CMP; 1.65A {Mus musculus} PDB: 3ffq_A 1q3e_A* 1q43_A* 1q5o_A* 3u10_A* 2q0a_A* 3etq_A* 3u11_A* 3otf_A* 3u0z_A*
Probab=99.60 E-value=2.6e-15 Score=130.08 Aligned_cols=90 Identities=17% Similarity=0.310 Sum_probs=85.4
Q ss_pred hchhhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhccccHHHHHhhCCHHHHHHHHHHHHHhhhhcccCCcC
Q 016154 304 HSAVRTLFMRNAINEILRYGSKNRLPEGLREQMLAHMQLRFKTAELQQEEVLEDLPKAIRSSISQHLFRGTVEKTYLFQG 383 (394)
Q Consensus 304 ~~~~~~~~~~~~~~~i~~~m~~~~l~~~l~~rv~~y~~~~~~~~~~~~~~il~~Lp~~Lr~ei~~~~~~~~l~~~~~F~~ 383 (394)
+++.++.+|+++++.+++||+.+++|++|+.||++|++|.|+.++.+++++++.||++||+||..+.++++++++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~i~~~m~~~~i~~~l~~rv~~y~~~~~~~~~~~e~~il~~l~~~L~~~i~~~~~~~~l~~~~~f~~ 82 (202)
T 3bpz_A 3 AMDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREKIVNFNCRKLVASMPLFAN 82 (202)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHSCHHHHHHHHHHHTHHHHHTCHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCCHHHHHHHcCHHHHHHHHHHHHHHHHhcCCchhc
Confidence 57888999999999999999999999999999999999999877899999999999999999999999999999999999
Q ss_pred CCHHHHHhhc
Q 016154 384 VSVDLIAQMV 393 (394)
Q Consensus 384 ~~~~~l~~L~ 393 (394)
+|++++.+|+
T Consensus 83 l~~~~l~~l~ 92 (202)
T 3bpz_A 83 ADPNFVTAML 92 (202)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 9999999885
No 13
>2k1e_A Water soluble analogue of potassium channel, KCSA; homotetramer, ION transport, ionic channel, membrane, transmembrane, transport; NMR {Escherichia coli} PDB: 2kb1_A
Probab=99.56 E-value=2.8e-15 Score=114.61 Aligned_cols=93 Identities=20% Similarity=0.188 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHH
Q 016154 200 RLSKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVF 279 (394)
Q Consensus 200 ~l~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~ 279 (394)
.++..++.+++++...+++++.++.. .+++....|.+|+||+++|+||+||||+.|.|+.++++
T Consensus 7 ~~l~~~~~~~~~~~~~a~~~~~~E~~----------------~~~~~~~~~~~a~y~~~~T~tTvGyGDi~P~t~~gr~~ 70 (103)
T 2k1e_A 7 EAQKAEEELQKVLEEASKKAVEAERG----------------APGAALISYPDAIWWSVETATTVGYGDRYPVTEEGRKV 70 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT----------------STTCCCCCGGGTTTTTTGGGGCCSCCSSCCCSSSCTHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccC----------------CCCcccccHHHHHHHHHHHHhcccCCCCCCCChhHHHH
Confidence 34555666666777788888888632 11233346999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchhh
Q 016154 280 NMLYMLFNIGLTAYIIGNMTNLIVHSAVR 308 (394)
Q Consensus 280 ~i~~~i~g~~~~a~~i~~i~~~~~~~~~~ 308 (394)
+++.+++|+.++++.++.+++.+.+..++
T Consensus 71 ~~~~~l~G~~~~~~~~~~i~~~~~~~~~~ 99 (103)
T 2k1e_A 71 AEQVMKAGIEVFALVTAALATDFVRREEE 99 (103)
T ss_dssp HHHHHHHHHHHHHHTHHHHHTTGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887765443
No 14
>2q67_A Potassium channel protein; inverted teepee, helix bundle, tetramer, central cavity, ION metal transport, membrane protein; 2.30A {Bacillus cereus} PDB: 2q68_A 2q6a_A 2q69_A 2ahy_A 2ahz_A
Probab=99.51 E-value=2e-13 Score=105.97 Aligned_cols=61 Identities=30% Similarity=0.483 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhH
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVRT 309 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~ 309 (394)
.|.+|+||+++|+||+||||+.|.|+.+++++++.+++|+.++++.++.+++.+...+...
T Consensus 49 ~~~~a~y~~~~T~tTvGyGdi~P~t~~gr~~~~~~~~~G~~~~~~~~~~l~~~~~~~~~~~ 109 (114)
T 2q67_A 49 RPIDALYFSVVTLTTVGAGNFSPQTDFGKIFTILYIFIGIGLVFGFIHKLAVNVQLPSILS 109 (114)
T ss_dssp CHHHHHHHHHHHHTSCCCSSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred CHHHHHHHHHHHhcceeCCCCccCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999998886554443
No 15
>3ouf_A Potassium channel protein; ION channel, membrane, membrane protein; 1.55A {Bacillus cereus} PDB: 3t4z_A 3tcu_A 3t1c_A 3tet_A 3t4d_A 3t2m_A 3e86_A 3e83_A 3e89_A 3e8b_A 3e8f_A 3e8g_A 3e8h_A 3k0d_A 3k0g_A 3k06_A 3k08_A 3k04_A 3k03_A
Probab=99.43 E-value=1.1e-12 Score=98.62 Aligned_cols=82 Identities=28% Similarity=0.472 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHH
Q 016154 202 SKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNM 281 (394)
Q Consensus 202 ~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i 281 (394)
+...+..+++....+++.|.... + ..|.+|+||+++|+||+||||+.|.|..++++++
T Consensus 7 ~~~~~~~~~~~~~~g~~~~~~~e---------------~-------~~~~~a~yf~~~T~tTvGyGdi~P~t~~gr~~~~ 64 (97)
T 3ouf_A 7 FQVLFVLTILTLISGTIFYSTVE---------------G-------LRPIDALYFSVVTLTTVGYGDFSPQTDFGKIFTI 64 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS---------------C-------CCHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---------------C-------CCHHHHHHHHHHHHHccCCCCCCCCCccHHHHHH
Confidence 44455555566666676665431 1 1489999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 016154 282 LYMLFNIGLTAYIIGNMTNLIVHS 305 (394)
Q Consensus 282 ~~~i~g~~~~a~~i~~i~~~~~~~ 305 (394)
+.+++|+.++++.++.+++.++..
T Consensus 65 ~~~~~G~~~~~~~i~~i~~~~~~~ 88 (97)
T 3ouf_A 65 LYIFIGIGLVFGFIHKLAVNVQLP 88 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999877543
No 16
>3ldc_A Calcium-gated potassium channel MTHK; transmembrane, ION channel, open conformation, IO transport; 1.45A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3lde_A 4hyo_A 4hz3_D 3r65_A 3ous_A 3ldd_A
Probab=99.42 E-value=1.2e-12 Score=95.21 Aligned_cols=54 Identities=30% Similarity=0.597 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLI 302 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~ 302 (394)
.|.+|+||+++|+||+||||+.|.|+.+|+++++.+++|..++++.++.+++.+
T Consensus 28 ~~~~a~yf~~~T~tTvGyGdi~P~t~~~r~~~~~~~~~G~~~~~~~~~~i~~~l 81 (82)
T 3ldc_A 28 SWTVSLYWTFVTIATVGYGDYSPHTPLGMYFTCTLIVLGIGTFAVAVERLLEFL 81 (82)
T ss_dssp CHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999999999999998765
No 17
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=99.30 E-value=2e-11 Score=107.59 Aligned_cols=207 Identities=14% Similarity=0.210 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccC--cccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhccc
Q 016154 61 RWWQTFLVVLVVYSAWASPFELAFRKA--ATGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRL 138 (394)
Q Consensus 61 ~~w~~~~~~~~~~~~~~~p~~~~f~~~--~~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~ 138 (394)
+.++.++.++++.+++....+. .+.. ....+..+|.++.++|.+|+++|+... | ++ ++|++++
T Consensus 12 ~~f~~~i~~~I~ln~i~l~~~~-~~~~~~~~~~l~~~e~~~~~iF~~E~~lri~~~------~----~~----~~y~~~~ 76 (229)
T 4dxw_A 12 RIFQFTVVSIIILNAVLIGATT-YELDPLFLETIHLLDYGITIFFVIEILIRFIGE------K----QK----ADFFKSG 76 (229)
T ss_dssp HHHHHHHHHHHHHHHHSTTTCC-SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------------------CH
T ss_pred chHHHHHHHHHHHHHHHHHHcc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHc------C----ch----hHHhcCC
Confidence 4678888888888887766554 2211 134577899999999999999998764 2 11 7899999
Q ss_pred cccccccccccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHHHH
Q 016154 139 WFTMDVASTLPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLEKDIR-FTYFITRLSKLICVTLFAVHSAGC 217 (394)
Q Consensus 139 ~f~~Dlis~lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~~~~~-~~~~~~~l~~~~~~~l~~~h~~ac 217 (394)
|.++|+++++|..+... . +.....+|++|++|++|+.+..+.++.... .......+..+.+.++++...+|+
T Consensus 77 wni~D~~~v~~~~i~~~---~----~~~~~~lr~~RilR~lrl~~~~~~l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~ 149 (229)
T 4dxw_A 77 WNIFDTVIVAISLIPIP---N----NSSFLVLRLLRIFRVLRLISVIPELKQIIEAILESVRRVFFVSLLLFIILYIYAT 149 (229)
T ss_dssp HHHHHHHHHHHTTCC---------------CCTTHHHHHHTTHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcC---c----cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999876665432110 0 122234455555555555444443332221 111223444444455555555555
Q ss_pred HHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCC----CCCchhHHHHHHHHH-HHHHHHH
Q 016154 218 FYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLH----AVNTGEKVFNMLYML-FNIGLTA 292 (394)
Q Consensus 218 ~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~----p~t~~e~i~~i~~~i-~g~~~~a 292 (394)
+-+.+-. + .+++.++....|++|.+.++|+.||+|+. ..++...++-+...+ .+.++..
T Consensus 150 ~g~~lf~----~------------~~~~~F~~~~~a~~~lf~~~t~~~w~~i~~~~~~~~~~~~~~f~~~~~i~~~i~lN 213 (229)
T 4dxw_A 150 MGAILFG----N------------DDPSRWGDLGISLITLFQVLTLSSWETVMLPMQEIYWWSWVYFFSFIIICSITILN 213 (229)
T ss_dssp HHHHHTT----T------------TSCTTTSSHHHHHHHHHHHHTTSSTHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----c------------CCcccccCHHHHHHHHHHHHccCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 4333321 1 12234667899999999999999999872 223344444444444 4456777
Q ss_pred HHHHHHHHHHHhc
Q 016154 293 YIIGNMTNLIVHS 305 (394)
Q Consensus 293 ~~i~~i~~~~~~~ 305 (394)
.++|.+.+-+++.
T Consensus 214 lfiavi~~~f~~~ 226 (229)
T 4dxw_A 214 LVIAILVDVVIQK 226 (229)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 7777776665543
No 18
>3pjs_K KCSA, voltage-gated potassium channel; ION channel, conducts K+ IONS, cell membrane, transport PROT; 3.80A {Streptomyces lividans} PDB: 1f6g_A
Probab=99.30 E-value=2.7e-13 Score=112.92 Aligned_cols=66 Identities=24% Similarity=0.410 Sum_probs=58.7
Q ss_pred hhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHH
Q 016154 246 IWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVRTLF 311 (394)
Q Consensus 246 ~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~ 311 (394)
....|.+|+||+++|+||+||||+.|.|..+++++++.+++|++++++++|.+++.+.....++.+
T Consensus 64 ~~~~~~~a~yf~~~T~tTvGyGDi~P~t~~~r~~~~~~~l~G~~~~~~~~~~i~~~~~~~~~~~~~ 129 (166)
T 3pjs_K 64 QLITYPRALWWSVETATTVGYGDLYPVTLWGRLVAVVVMVAGITSFGLVTAALATWFVGQEQQQQQ 129 (166)
T ss_dssp CCCSTTTTTTTTHHHHSCCCCSSSCCCSSTTTTTTHHHHHHHHHHHHHHHTTSSSSSSSSHHHHHH
T ss_pred ccCCHHHHHHHHHHHhccccCCCCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334689999999999999999999999999999999999999999999999999888766554433
No 19
>1xl4_A Inward rectifier potassium channel; integral membrane protein, ION channel, inwardly rectifying channel, metal transport; 2.60A {Magnetospirillum magnetotacticum} SCOP: b.1.18.16 f.14.1.1 PDB: 1xl6_A* 2wlh_A 2wli_B 2wlj_A* 2wlk_A* 2wlm_A 2wlo_A 2wln_A 3zrs_A 2wli_A 2x6c_A* 2x6b_A* 2x6a_A*
Probab=99.24 E-value=2.1e-11 Score=110.80 Aligned_cols=84 Identities=15% Similarity=0.137 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHH
Q 016154 206 CVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYML 285 (394)
Q Consensus 206 ~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i 285 (394)
+..++....+|++|+..+. ..+.+....|.+|+||+++|+||+||||+.|.++.+++++++.++
T Consensus 55 ~~~~~~~l~fa~ly~~~~~----------------~~~~~~~~s~~~a~yfs~vT~tTvGYGDi~P~t~~gr~~~~~~~l 118 (301)
T 1xl4_A 55 GLYLVTNALFALAYLACGD----------------VIENARPGSFTDAFFFSVQTMATIGYGKLIPIGPLANTLVTLEAL 118 (301)
T ss_dssp HHHHHHHHHHHHHHHHTCS----------------CSTTSCTTCHHHHHHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcc----------------ccCCCCcCCHHHHHHHhhhheeccCCCCCcCCCHHHHHHHHHHHH
Confidence 3344555777888665531 011223456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 016154 286 FNIGLTAYIIGNMTNLIVHS 305 (394)
Q Consensus 286 ~g~~~~a~~i~~i~~~~~~~ 305 (394)
+|++++|+++|.+.+.+...
T Consensus 119 ~G~~~~a~~~g~v~~~~~~~ 138 (301)
T 1xl4_A 119 CGMLGLAVAASLIYARFTRP 138 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhH
Confidence 99999999999998877643
No 20
>1p7b_A Integral membrane channel and cytosolic domains; transmembrane helices, ION conduction, immunoglobulin fold, assembly; 3.65A {Burkholderia pseudomallei} SCOP: b.1.18.16 f.14.1.1 PDB: 2wll_B* 2wll_A*
Probab=99.14 E-value=6.1e-11 Score=108.91 Aligned_cols=59 Identities=24% Similarity=0.393 Sum_probs=55.1
Q ss_pred hhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 016154 248 LGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSA 306 (394)
Q Consensus 248 ~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~ 306 (394)
..|.+|+||+++|+||+||||++|.+..+++++++.+++|++++|+++|.+.+.+....
T Consensus 95 ~s~~~a~yfs~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~ig~i~~~~~~~~ 153 (333)
T 1p7b_A 95 PGFVGAFFFSVETLATVGYGDMHPQTVYAHAIATLEIFVGMSGIALSTGLVFARFARPR 153 (333)
T ss_dssp SSTHHHHHHHTTTTTTCCCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred CcHHHhHhhhheeeeecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999998887554
No 21
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=99.12 E-value=1e-09 Score=99.25 Aligned_cols=77 Identities=22% Similarity=0.375 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhCCC
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSAVRTLFMRNAINEILRYGSKNRL 328 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~~~~~~~~~~~i~~~m~~~~l 328 (394)
.|.+|+||+++|+||+||||+.|.|..+++++++.+++|+.+++++++.+++.+.... ++....++....+.+.
T Consensus 115 ~~~~a~yf~~~t~tTvGYGdi~P~T~~gk~~~i~~~l~Gi~~~~~~~~~i~~~l~~~~------~~~i~~le~~~~~~~~ 188 (309)
T 3um7_A 115 DLGSAFFFSGTIITTIGYGNVALRTDAGRLFCIFYALVGIPLFGILLAGVGDRLGSSL------RHGIGHIEAIFLKWHV 188 (309)
T ss_dssp SHHHHHHHHHHHHTSCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHTHHHHHHHTTTC-
T ss_pred ChhhhhHhhheeeeecccCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hhhHHHHHHHHhcccc
Confidence 7999999999999999999999999999999999999999999999999998876432 2233334444555555
Q ss_pred CHH
Q 016154 329 PEG 331 (394)
Q Consensus 329 ~~~ 331 (394)
++.
T Consensus 189 ~~~ 191 (309)
T 3um7_A 189 PPE 191 (309)
T ss_dssp -CC
T ss_pred chh
Confidence 543
No 22
>2qks_A KIR3.1-prokaryotic KIR channel chimera; G-protein gated inward rectifier, potassium channel selectivity filter, metal transport; HET: BNG; 2.20A {Burkholderia xenovorans}
Probab=99.12 E-value=3.7e-10 Score=103.37 Aligned_cols=58 Identities=24% Similarity=0.397 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSA 306 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~ 306 (394)
.|.+|+||+++|+||+||||+.|.+..+++++++.+++|++++|+++|.+.+.+....
T Consensus 78 s~~~a~y~s~vT~tTVGYGDi~P~t~~gr~~~~~~~l~G~~~~a~~~g~i~~~~~~~~ 135 (321)
T 2qks_A 78 GFGGAFFFSVETLATVGYGDMHPQTVYAHWIATLEIFVGMSSIALATGCAFIKMSQPK 135 (321)
T ss_dssp THHHHHHHHHHHHTTCCCCSSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred chhheeeeeeEEeccccCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999998887653
No 23
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=98.95 E-value=1.8e-09 Score=97.68 Aligned_cols=60 Identities=28% Similarity=0.430 Sum_probs=54.3
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHHhchhh
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEK------VFNMLYMLFNIGLTAYIIGNMTNLIVHSAVR 308 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~------i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~~ 308 (394)
.|.+|+||+++|+|||||||+.|.+..++ +++++.+++|+.+++++++.+++.+....++
T Consensus 224 ~~~da~y~~~vTltTvGyGd~~p~t~~g~~~~~y~~~~~~~il~Gl~~~a~~~~~i~~~~~~~~~r 289 (309)
T 3um7_A 224 SKLEAIYFVIVTLTTVGFGDYVAGADPRQDSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRR 289 (309)
T ss_dssp CHHHHHHHHHHHHTTCCCSSCCTTCCTTCCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTT
T ss_pred CHHHHHHHHHhheeccccCCCCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999998887 5999999999999999999999887765543
No 24
>3sya_A G protein-activated inward rectifier potassium CH; ION channel, potassium channel, inward rectification, sodium PIP2 binding, G protein binding; HET: PIO; 2.98A {Mus musculus} PDB: 3syo_A 3syc_A 3syp_A 3syq_A*
Probab=98.95 E-value=6.2e-09 Score=95.35 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCC----CCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCC--Cchh
Q 016154 203 KLICVTLFAVHSAGCFYFYLAAHHKIP----ENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAV--NTGE 276 (394)
Q Consensus 203 ~~~~~~l~~~h~~ac~~~~i~~~~~~~----~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~--t~~e 276 (394)
.+.+..++..-++|++||.++...++. +++|.. .......+.+|+||+++|+||+||||+.|. ++.+
T Consensus 48 if~~~y~~swl~Fa~ly~~ia~~~Gdl~~~~~~~~~~-------Cv~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~~g 120 (340)
T 3sya_A 48 IFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTP-------CVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEG 120 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTTCSSCSSCCC-------SBSCCCSTTHHHHHHHHHHSCCCCSSSCBCTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-------hhccccCHHHHHhhhheeeeeecCCCccCcCcCHHH
Confidence 333444555567889999887422221 112211 112235688999999999999999999996 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchh
Q 016154 277 KVFNMLYMLFNIGLTAYIIGNMTNLIVHSAV 307 (394)
Q Consensus 277 ~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~~ 307 (394)
++++.+.+++|+++.|+++|.+.+-+....+
T Consensus 121 ~~l~~~~~l~G~~l~a~~~giv~ak~srp~~ 151 (340)
T 3sya_A 121 IILLLIQSVLGSIVNAFMVGCMFVKISQPKK 151 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 9999999999999999999999887765543
No 25
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=98.94 E-value=3.9e-09 Score=105.47 Aligned_cols=87 Identities=18% Similarity=0.337 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCCCCchhHH
Q 016154 199 TRLSKLICVTLFAVHSAGCFYFYLAAHHKIPENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHAVNTGEKV 278 (394)
Q Consensus 199 ~~l~~~~~~~l~~~h~~ac~~~~i~~~~~~~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i 278 (394)
..+...++.+++++++.+|+|+++....+... ..|.+|+||+++|+||+||||+.|.|..+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----------------~~~~~~~y~~~~t~tTvGygd~~p~~~~~~~ 80 (565)
T 4gx0_A 18 KVLLLYCAFLLVMLLAYASIFRYLMWHLEGRA-----------------YSFMAGIYWTITVMTTLGFGDITFESDAGYL 80 (565)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------CCHHHHHHHHHHHHTTCCCCSSCCCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-----------------CchhhhhheeeeeeeeecCCCcCCCCccHHH
Confidence 34566666777777777887776653111111 1478999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHH
Q 016154 279 FNMLYMLFNIGLTAYIIGN-MTNLI 302 (394)
Q Consensus 279 ~~i~~~i~g~~~~a~~i~~-i~~~~ 302 (394)
++++.+++|+.++++.++. +.+.+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~ 105 (565)
T 4gx0_A 81 FASIVTVSGVIFLDIILPFGFVSMF 105 (565)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 55444
No 26
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=98.93 E-value=9.2e-09 Score=81.95 Aligned_cols=110 Identities=18% Similarity=0.223 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhcccCc--ccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhccc
Q 016154 61 RWWQTFLVVLVVYSAWASPFELAFRKAA--TGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRL 138 (394)
Q Consensus 61 ~~w~~~~~~~~~~~~~~~p~~~~f~~~~--~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~ 138 (394)
+.++.+++++++.+.+.+..+..-+... ...+..+|.++.++|.+|+++|+.++ .+| ++|++
T Consensus 6 ~~f~~~i~~lIlls~~~~~~et~~~~~~~~~~~l~~~d~~~~~iFt~E~~lRl~~~----------~~~----~~y~~-- 69 (132)
T 1ors_C 6 PLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKS----------GDP----AGYVK-- 69 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------TST----TTTTT--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCH----HHHHH--
Confidence 4678899888888888887776433222 34577899999999999999999875 122 78999
Q ss_pred cccccccccccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHHhhhh
Q 016154 139 WFTMDVASTLPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLEKDIR 193 (394)
Q Consensus 139 ~f~~Dlis~lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~~~~~ 193 (394)
|.++|+++++|+...... + .....+|++|++|++|+.|+.+.......
T Consensus 70 ~niiDllailp~~~~~~~-~------~~l~~lr~lRllRv~Rvlkl~r~~~~l~~ 117 (132)
T 1ors_C 70 KTLYEIPALVPAGLLALI-E------GHLAGLGLFRLVRLLRFLRILLIISRGSK 117 (132)
T ss_dssp TCGGGTGGGSCHHHHHHH-H------HHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh-c------chHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 899999999999866543 1 22345566666666666666555444333
No 27
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=98.90 E-value=1e-08 Score=82.95 Aligned_cols=113 Identities=19% Similarity=0.243 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhhhcccCc--ccchHHHHHHHHHHHHHHHHhhcceeEEeCCCceEeccHHHHHHHhhcccc
Q 016154 62 WWQTFLVVLVVYSAWASPFELAFRKAA--TGSLLIVDLVVDFFFAADIIFTFFVAYLDKSTYLLVDDHKKIALRYVTRLW 139 (394)
Q Consensus 62 ~w~~~~~~~~~~~~~~~p~~~~f~~~~--~~~~~~~~~~~~~if~~Di~l~f~t~y~~~~~g~~v~~~~~i~~~Yl~~~~ 139 (394)
.|+.++.++++.+++.+.++....... ...+..+|.++.++|.+|+++++..+ .++ ++|+++
T Consensus 22 ~f~~~i~~lil~sv~~v~~et~~~i~~~~~~~~~~id~~~~~iF~~Ey~lRl~~a----------~~k----~~f~~~-- 85 (147)
T 2kyh_A 22 LVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKS----------GDP----AGYVKK-- 85 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------TCH----HHHHHH--
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CcH----HHHHHH--
Confidence 578888888888888888777654332 33577899999999999999999876 123 789997
Q ss_pred ccccccccccHHHHHHHhcCCcCCCcchhhhhhHHHHhHHhHHHHHHHHHhhhhhhHH
Q 016154 140 FTMDVASTLPFQFIYRIFTGQLHDGRVFGFLNLLRLWRLRRVGELFTRLEKDIRFTYF 197 (394)
Q Consensus 140 f~~Dlis~lP~~~~~~~~~~~~~~~~~~~~l~l~rllRl~ri~~~~~~~~~~~~~~~~ 197 (394)
.++|+++++|+...... + ....++|++|++|++|+.++.+..........+
T Consensus 86 ~iiDllailP~~~~~~~-~------~~lr~lRvlRllRv~Rllrl~r~~~~~~~l~~a 136 (147)
T 2kyh_A 86 TLYEIPALVPAGLLALI-E------GHLAGLGLFRLVRLLRFLRILLIISRGSKFLSA 136 (147)
T ss_dssp STTTHHHHCCHHHHHHH-H------HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-H------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999865433 1 224556666666666666665554444443333
No 28
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=98.84 E-value=4.9e-09 Score=93.39 Aligned_cols=56 Identities=23% Similarity=0.514 Sum_probs=52.4
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVH 304 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~ 304 (394)
.|.+|+||+++|+||+||||++|.|+.+++++++.+++|+.++++.++.++..+..
T Consensus 93 ~~~~a~yf~~~t~tTvGyGd~~P~T~~Gk~f~~~~~l~Gi~~~~~~~~~~~~~l~~ 148 (280)
T 3ukm_A 93 DFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRITV 148 (280)
T ss_dssp SHHHHHHHHHHHHTTCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhcchhheeeeeeccccCCcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998865543
No 29
>3ukm_A Potassium channel subfamily K member 1; membrane protein, eukaryotic, two-pore DO potassium channel, K2P channel, membrane; HET: UND; 3.40A {Homo sapiens}
Probab=98.84 E-value=7.6e-09 Score=92.20 Aligned_cols=56 Identities=20% Similarity=0.310 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTG-------EKVFNMLYMLFNIGLTAYIIGNMTNLIVH 304 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~-------e~i~~i~~~i~g~~~~a~~i~~i~~~~~~ 304 (394)
.|.+|+||+++|+||+||||+.|.+.. .++++++.+++|+.+++++++.+.+....
T Consensus 201 s~~da~y~~~iTltTvGyGD~~p~t~~~~~~~~l~r~~~~~~il~Gl~~~~~~~~~i~~~~~~ 263 (280)
T 3ukm_A 201 NFLESFYFCFISLSTIGLGDYVPGEGYNQKFRELYKIGITCYLLLGLIAMLVVLETFCELHEL 263 (280)
T ss_dssp CHHHHHHHHHHHHTTCCCCSCCSSCSSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHH
T ss_pred chhhhhhheeeeeecccCCCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 488999999999999999999999985 59999999999999999999999876653
No 30
>3spc_A Inward-rectifier K+ channel KIR2.2; PIP, membrane protein, lipid, receptor, metal transport; HET: P8P; 2.45A {Gallus gallus} PDB: 3jyc_A* 3spi_A* 3sph_A* 3spj_A 3spg_A*
Probab=98.81 E-value=1.8e-08 Score=92.44 Aligned_cols=98 Identities=16% Similarity=0.187 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCC-----CCCceeccccCcccccchhhhhHHHHHHHHHHhhhcccCCCCC--CCc
Q 016154 202 SKLICVTLFAVHSAGCFYFYLAAHHKI-----PENTWIGSQVNDFKHRSIWLGYTYSIYWSIVTLTTVGYGDLHA--VNT 274 (394)
Q Consensus 202 ~~~~~~~l~~~h~~ac~~~~i~~~~~~-----~~~~W~~~~~~~~~~~~~~~~Y~~sly~a~~t~ttvGygdi~p--~t~ 274 (394)
+.+....++..-++|.+|++++...++ +.++|..- ......+.+|+||++.|+||+||||+.| .++
T Consensus 49 l~f~~~y~~swl~Fally~~ia~~~gdl~~~~~~~~~~~C-------v~~~~sf~~af~fSv~T~TTvGYGd~~p~~~~~ 121 (343)
T 3spc_A 49 LLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDDTFKPC-------VLQVNGFVAAFLFSIETQTTIGYGFRCVTEECP 121 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTGGGCTTCCSSCCCS-------EETCCSHHHHHHHHHHHHSCCCCSSSEECSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccc-------ccccCCHHHHhheeeeeeEeecCCCccCCCCCH
Confidence 333445555666788888887653221 12222211 1123568999999999999999999986 589
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 016154 275 GEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSA 306 (394)
Q Consensus 275 ~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~ 306 (394)
.+++++.+.+++|+++.|.++|.+.+-+....
T Consensus 122 ~~~~l~~~~~l~G~~l~a~~~giv~ak~srp~ 153 (343)
T 3spc_A 122 LAVFMVVVQSIVGCIIDSFMIGAIMAKMARPK 153 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999999999999988776543
No 31
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=98.56 E-value=5.1e-09 Score=97.66 Aligned_cols=58 Identities=28% Similarity=0.600 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhch
Q 016154 249 GYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVHSA 306 (394)
Q Consensus 249 ~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~~~ 306 (394)
.|.+|+||+++|+||+||||+.|.|..+++++++.+++|+.++++.++.+.+.+....
T Consensus 45 ~~~~a~y~~~~t~tTvGyGd~~p~t~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 102 (336)
T 1lnq_A 45 SWTVSLYWTFVTIATVGYGDYSPSTPLGMYFTVTLIVLGIGTFAVAVERLLEFLINRE 102 (336)
T ss_dssp CSSTTHHHHHHHHTTCCCSSCCCCCSSHHHHHTHHHHTTSTTTTTHHHHHTTTC----
T ss_pred CHHHHHHHHHHHhhcccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4778999999999999999999999999999999999999999999999988776543
No 32
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=85.73 E-value=0.88 Score=46.90 Aligned_cols=56 Identities=13% Similarity=0.340 Sum_probs=45.7
Q ss_pred hhhHHHHHHHHHHhhhcccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016154 248 LGYTYSIYWSIVTLTTVGYGDLHAVNTGEKVFNMLYMLFNIGLTAYIIGNMTNLIVH 304 (394)
Q Consensus 248 ~~Y~~sly~a~~t~ttvGygdi~p~t~~e~i~~i~~~i~g~~~~a~~i~~i~~~~~~ 304 (394)
.....++|+++.++++.| ++..|.+...|++.++.+++++++.+...+++.+.+..
T Consensus 562 ~~~~~~~~~~~~~l~~~g-~~~~p~~~~~R~~~~~w~~~~lil~~~Yta~L~s~Lt~ 617 (823)
T 3kg2_A 562 FGIFNSLWFSLGAFMQQG-ADISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 617 (823)
T ss_dssp HHHHHHHHHTTTTSCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcC-CCcCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 346689999999999888 78899999999999999999999999999999999864
No 33
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=76.77 E-value=6.1 Score=33.54 Aligned_cols=16 Identities=38% Similarity=0.484 Sum_probs=6.5
Q ss_pred HHHhHHhHHHHHHHHH
Q 016154 174 RLWRLRRVGELFTRLE 189 (394)
Q Consensus 174 rllRl~ri~~~~~~~~ 189 (394)
|++|++|+.|+.+..+
T Consensus 102 r~~RilR~lrl~~~~~ 117 (229)
T 4dxw_A 102 RLLRIFRVLRLISVIP 117 (229)
T ss_dssp TTHHHHHHTTHHHHCH
T ss_pred HHHHHHHHHHHHHHhH
Confidence 4444444444443333
No 34
>4f4l_A ION transport protein; alpha helical membrane protein, voltage-gated sodium channel membrane, metal transport; 3.49A {Magnetococcus marinus}
Probab=69.48 E-value=16 Score=27.05 Aligned_cols=58 Identities=14% Similarity=0.213 Sum_probs=31.7
Q ss_pred hhhhhHHHHHHHHHHhhhcccCCCC--C---CCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 016154 246 IWLGYTYSIYWSIVTLTTVGYGDLH--A---VNTGEKVFNMLYMLFNI-GLTAYIIGNMTNLIV 303 (394)
Q Consensus 246 ~~~~Y~~sly~a~~t~ttvGygdi~--p---~t~~e~i~~i~~~i~g~-~~~a~~i~~i~~~~~ 303 (394)
.+.....|+.-.+..+|+-|+.+.. | .++...++-+..+++|. ++...++|.+.+-++
T Consensus 35 ~F~~~~~s~ltLF~i~T~e~W~~~~~~~~~~~~~~a~iyFi~fi~i~~fi~lNLfiaVi~~~f~ 98 (112)
T 4f4l_A 35 WFGDLSKSLYTLFQVMTLESWSMGIVRPVMNVHPNAWVFFIPFIMLTTFTVLNLFIGIIVDAMA 98 (112)
T ss_dssp HHSSHHHHHHHHHHHHTTTTCCCCCHHHHTTTSTTTHHHHHHHHHHHHHHHHHHHTTTC-----
T ss_pred cccCHHHHHHHHHHHHHccccHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555677777777777877876532 2 34455566666666654 445555555544443
No 35
>3shr_A CGMP-dependent protein kinase 1; cyclic nucleotide binding domains, cyclic nucleotide protein transferase, PKG; HET: CMP; 2.50A {Bos taurus}
Probab=56.81 E-value=2.8 Score=37.08 Aligned_cols=42 Identities=14% Similarity=0.292 Sum_probs=35.1
Q ss_pred HHHHhhCCHHHHHHHHHHHHHhhhhcccCCcCCCHHHHHhhc
Q 016154 352 EEVLEDLPKAIRSSISQHLFRGTVEKTYLFQGVSVDLIAQMV 393 (394)
Q Consensus 352 ~~il~~Lp~~Lr~ei~~~~~~~~l~~~~~F~~~~~~~l~~L~ 393 (394)
..-..++|+..|.+...+...+.++++++|++++++.+.+|+
T Consensus 18 ~~~~~~~p~~~rs~~~~~~i~~~l~~~~~f~~l~~~~~~~l~ 59 (299)
T 3shr_A 18 RGSMQAFRKFTKSERSKDLIKEAILDNDFMKNLELSQIQEIV 59 (299)
T ss_dssp ----CCCCCCCCCHHHHHHHHHHHHTCTTTTTSCHHHHHHHH
T ss_pred ccccCCCCCcCCCHHHHHHHHHHHhhCHHHHcCCHHHHHHHH
Confidence 344567899999999999999999999999999999998875
No 36
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=55.65 E-value=22 Score=29.79 Aligned_cols=16 Identities=31% Similarity=0.538 Sum_probs=7.9
Q ss_pred hhhhhhHHHHhHHhHH
Q 016154 167 FGFLNLLRLWRLRRVG 182 (394)
Q Consensus 167 ~~~l~l~rllRl~ri~ 182 (394)
.+.+|++|++|+.|+.
T Consensus 99 lr~lRllRllR~~r~~ 114 (223)
T 1orq_C 99 FRLVRLLRFLRILLII 114 (223)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3345555555555543
No 37
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=46.08 E-value=11 Score=25.27 Aligned_cols=14 Identities=29% Similarity=0.722 Sum_probs=10.1
Q ss_pred HHhhCCHHHHHHHH
Q 016154 354 VLEDLPKAIRSSIS 367 (394)
Q Consensus 354 il~~Lp~~Lr~ei~ 367 (394)
.|++||++||++|.
T Consensus 8 wL~~LP~~Lq~kV~ 21 (70)
T 2lh0_A 8 FLDELPESLSRKIG 21 (70)
T ss_dssp GGGGSCHHHHHHHH
T ss_pred HHHhCCHHHHHHHH
Confidence 56777777777774
No 38
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=39.53 E-value=91 Score=27.00 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=14.6
Q ss_pred hhhHHHHhHHhHHHHHHHHHhhhhhhHH
Q 016154 170 LNLLRLWRLRRVGELFTRLEKDIRFTYF 197 (394)
Q Consensus 170 l~l~rllRl~ri~~~~~~~~~~~~~~~~ 197 (394)
++.+|++|++|+.|+.+...........
T Consensus 113 ~~~lr~~RilR~lrl~~~~~~l~~l~~~ 140 (285)
T 3rvy_A 113 FEILRVLRVLRLFRLVTAVPQMRKIVSA 140 (285)
T ss_dssp CTHHHHHGGGGGGHHHHSSTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666665544444433333
No 39
>2db7_A Hairy/enhancer-OF-split related with YRPW motif 1; structural genomics, unknown function, DNA binding protein, NPPSFA; 1.90A {Homo sapiens} SCOP: a.273.1.1
Probab=34.38 E-value=87 Score=20.55 Aligned_cols=35 Identities=29% Similarity=0.408 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHh-CCCCHH--HHHHHHHHHHHHH
Q 016154 310 LFMRNAINEILRYGSK-NRLPEG--LREQMLAHMQLRF 344 (394)
Q Consensus 310 ~~~~~~~~~i~~~m~~-~~l~~~--l~~rv~~y~~~~~ 344 (394)
.-|.+.+.++..||.. .+++.. ++.|+.+++....
T Consensus 22 ~Gf~eC~~EV~rfLs~~eg~d~~d~~r~rLl~HL~~~~ 59 (64)
T 2db7_A 22 LGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYA 59 (64)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHh
Confidence 3799999999999988 667765 9999999887554
No 40
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=31.55 E-value=37 Score=25.88 Aligned_cols=13 Identities=38% Similarity=0.611 Sum_probs=5.2
Q ss_pred HHHHhHHhHHHHH
Q 016154 173 LRLWRLRRVGELF 185 (394)
Q Consensus 173 ~rllRl~ri~~~~ 185 (394)
+|++|+.|+.|.+
T Consensus 94 lr~lRllRv~Rvl 106 (132)
T 1ors_C 94 LGLFRLVRLLRFL 106 (132)
T ss_dssp TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3334444444433
No 41
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=30.18 E-value=13 Score=22.49 Aligned_cols=18 Identities=33% Similarity=0.604 Sum_probs=14.9
Q ss_pred HHHHHhhCCHHHHHHHHH
Q 016154 351 QEEVLEDLPKAIRSSISQ 368 (394)
Q Consensus 351 ~~~il~~Lp~~Lr~ei~~ 368 (394)
..++++.||..+++|+..
T Consensus 17 D~eVF~~LP~dIQ~Ells 34 (48)
T 2kwv_A 17 DQEVFKQLPADIQEEILS 34 (48)
T ss_dssp CGGGTTTSCHHHHHHHTT
T ss_pred CHHHHHHCcHHHHHHHHh
Confidence 457899999999999864
No 42
>2rnn_A E3 SUMO-protein ligase SIZ1; SUMO ligase, DNA binding, sumoylation, metal-binding, nucLeu phosphoprotein, UBL conjugation pathway; NMR {Saccharomyces cerevisiae}
Probab=28.78 E-value=49 Score=24.55 Aligned_cols=30 Identities=13% Similarity=0.193 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHH
Q 016154 315 AINEILRYGSKNRLPE-----GLREQMLAHMQLRF 344 (394)
Q Consensus 315 ~~~~i~~~m~~~~l~~-----~l~~rv~~y~~~~~ 344 (394)
+..+++++++.++++. +|..||..|++-.-
T Consensus 41 tVaELK~~cr~~GL~~sGkKaeLi~RI~~yl~~~~ 75 (114)
T 2rnn_A 41 KVSELKDICRSVSFPVSGRKAVLQDLIRNFLQNAL 75 (114)
T ss_dssp CHHHHHHHHHHTTCCTTSCHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHcCCCcCCcHHHHHHHHHHHHHhcc
Confidence 4567899999999985 79999999987543
No 43
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=27.25 E-value=3.3e+02 Score=24.14 Aligned_cols=21 Identities=14% Similarity=0.110 Sum_probs=11.8
Q ss_pred cchhhhhhHHHHhHHhHHHHH
Q 016154 165 RVFGFLNLLRLWRLRRVGELF 185 (394)
Q Consensus 165 ~~~~~l~l~rllRl~ri~~~~ 185 (394)
..++++|++|+.|..+..+.+
T Consensus 98 r~lr~~R~lrl~r~~~~~~~l 118 (355)
T 3beh_A 98 SLYCAVWLLKPLRDSTFFPVL 118 (355)
T ss_dssp GGGGGGGGSHHHHTCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445566667776655444433
No 44
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=26.74 E-value=51 Score=31.74 Aligned_cols=12 Identities=25% Similarity=0.758 Sum_probs=4.6
Q ss_pred HHHhHHhHHHHH
Q 016154 174 RLWRLRRVGELF 185 (394)
Q Consensus 174 rllRl~ri~~~~ 185 (394)
|++|++|+.|++
T Consensus 309 rvlRllRvlRil 320 (514)
T 2r9r_B 309 QIFRIMRILRIF 320 (514)
T ss_dssp HHHHHHGGGGGG
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 45
>3idb_B CAMP-dependent protein kinase type II-beta regulatory subunit, CAMP-dependent protein kinase catalytic subunit alpha; PKA, SPR, affinity; HET: TPO SEP ANP; 1.62A {Rattus norvegicus} PDB: 3idc_B*
Probab=26.45 E-value=17 Score=28.27 Aligned_cols=29 Identities=10% Similarity=0.300 Sum_probs=21.7
Q ss_pred HHHHHHHHhhhhcccCCcCCCHHHHHhhc
Q 016154 365 SISQHLFRGTVEKTYLFQGVSVDLIAQMV 393 (394)
Q Consensus 365 ei~~~~~~~~l~~~~~F~~~~~~~l~~L~ 393 (394)
+-..+...+.++++|+|++++++.+++|+
T Consensus 30 ~~~~~~~~~~l~~~~~f~~l~~~~l~~l~ 58 (161)
T 3idb_B 30 DDQRNRLQEACKDILLFKNLDPEQMSQVL 58 (161)
T ss_dssp HHHHHHHHHHHTTCHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHhhhcCCHHHHHHHH
Confidence 33445567788888899888888888764
No 46
>3pjz_A Potassium uptake protein TRKH; structural genomics, PSI-2, protein structure initiative, NE consortium on membrane protein structure; 3.51A {Vibrio parahaemolyticus}
Probab=25.73 E-value=1.1e+02 Score=29.23 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=32.5
Q ss_pred hhhhhHHHHHHHHHHhhhcccCCC--CCCCchhHHHHHHHHHHHHH
Q 016154 246 IWLGYTYSIYWSIVTLTTVGYGDL--HAVNTGEKVFNMLYMLFNIG 289 (394)
Q Consensus 246 ~~~~Y~~sly~a~~t~ttvGygdi--~p~t~~e~i~~i~~~i~g~~ 289 (394)
..++...|++-+++..||.||... ..-++....+.++.|++|.+
T Consensus 303 ~~~~l~~a~Fq~vS~~TttGF~t~d~~~w~~~~~~ll~~LMfIGG~ 348 (494)
T 3pjz_A 303 PYDAFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGC 348 (494)
T ss_dssp HHHHHHHHHHHHHHTTTTCCCCSCCCSSCCTHHHHHHHHHTTSCSC
T ss_pred HHHHHHHHHHheeecccCCcccccChHhCCHHHHHHHHHHHHHcCC
Confidence 445677899999999999999754 44455667777777877754
No 47
>2kyh_A KVAP, voltage-gated potassium channel; ION channel, membrane protein; NMR {Aeropyrum pernix}
Probab=25.03 E-value=75 Score=24.71 Aligned_cols=15 Identities=33% Similarity=0.425 Sum_probs=5.9
Q ss_pred hhHHHHhHHhHHHHH
Q 016154 171 NLLRLWRLRRVGELF 185 (394)
Q Consensus 171 ~l~rllRl~ri~~~~ 185 (394)
+++|++|+.|+.+++
T Consensus 107 r~lRvlRllRv~Rll 121 (147)
T 2kyh_A 107 AGLGLFRLVRLLRFL 121 (147)
T ss_dssp HHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444443333
No 48
>3gyd_A CNMP-BD protein, cyclic nucleotide-binding domain; nucleotide binding protein, structural genomics; HET: MSE CMP; 1.79A {Methylobacillus flagellatus KT}
Probab=24.58 E-value=27 Score=28.13 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=22.5
Q ss_pred HHHHHHhhhhcccCCcCCCHHHHHhhc
Q 016154 367 SQHLFRGTVEKTYLFQGVSVDLIAQMV 393 (394)
Q Consensus 367 ~~~~~~~~l~~~~~F~~~~~~~l~~L~ 393 (394)
..+-..+.++++|+|+++|++.+++|+
T Consensus 33 ~~~~~~~~L~~~~~f~~l~~~~l~~l~ 59 (187)
T 3gyd_A 33 YFEEILEIVNKIKLFGDFSNEEVRYLC 59 (187)
T ss_dssp GHHHHHHHHTTCCSSCCCCHHHHHHHH
T ss_pred HHHHHHHHHhcCHhhhcCCHHHHHHHH
Confidence 344567899999999999999998875
No 49
>2lcm_A Voltage-dependent N-type calcium channel subunit; voltage sensor peptide, membrane protein; NMR {Homo sapiens}
Probab=23.04 E-value=57 Score=17.42 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=10.6
Q ss_pred hhhhHHHHhHHhHHHHHHH
Q 016154 169 FLNLLRLWRLRRVGELFTR 187 (394)
Q Consensus 169 ~l~l~rllRl~ri~~~~~~ 187 (394)
.++.+|.+|.+|-.+.+++
T Consensus 5 ~l~~lrtlR~LRpLr~isr 23 (28)
T 2lcm_A 5 TIKSLRVLRVLRPLKTIKR 23 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHhcchHHHhh
Confidence 4555566666665555543
No 50
>3pna_A CAMP-dependent protein kinase type I-alpha regula subunit; beta-barrel, CAMP-binding, catalytic subunit, transferase; HET: CMP; 1.50A {Bos taurus} PDB: 3fhi_B* 3iia_A 3plq_A* 1u7e_B* 3pvb_B*
Probab=21.48 E-value=39 Score=25.89 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=20.0
Q ss_pred HHHHhhhhcccCCcCCCHHHHHhhc
Q 016154 369 HLFRGTVEKTYLFQGVSVDLIAQMV 393 (394)
Q Consensus 369 ~~~~~~l~~~~~F~~~~~~~l~~L~ 393 (394)
....++++++|+|++++++.+++|+
T Consensus 34 ~~~~~~l~~~~~f~~l~~~~~~~l~ 58 (154)
T 3pna_A 34 AALAKAIEKNVLFSHLDDNERSDIF 58 (154)
T ss_dssp HHHHHHHHHCGGGTTCCHHHHHHHH
T ss_pred HHHHHHHHhChhhhhCCHHHHHHHH
Confidence 3456788899999999998888764
No 51
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=21.40 E-value=3.3e+02 Score=25.98 Aligned_cols=59 Identities=10% Similarity=0.028 Sum_probs=31.0
Q ss_pred chhhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc------cccHHHHHhhCCHHHHHHH
Q 016154 305 SAVRTLFMRNAINEILRYGSKNRLPEGLREQMLAHMQLRFKTA------ELQQEEVLEDLPKAIRSSI 366 (394)
Q Consensus 305 ~~~~~~~~~~~~~~i~~~m~~~~l~~~l~~rv~~y~~~~~~~~------~~~~~~il~~Lp~~Lr~ei 366 (394)
+++....+..+++++++-+... ....+.+..|++-..+.- ..+.+....+++.+||+.|
T Consensus 55 LdkqErDltkrINELKnqLEdl---sKnsKdseqy~k~~~E~Lr~rq~q~~dNdNtynE~S~ELRRrI 119 (562)
T 3ghg_A 55 IDEVNQDFTNRINKLKNSLFEY---QKNNKDSHSLTTNIMEILRGDFSSANNRDNTYNRVSEDLRSRI 119 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHH---HHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred HHhhcCcHHHHHHHHHHHHHHH---HhhchhHHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHH
Confidence 3344555666666666555443 344445555555443221 2245556777776666654
No 52
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.29 E-value=70 Score=20.29 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=21.9
Q ss_pred HHHHHHHHHHhCCCCH-----HHHHHHHHHHHH
Q 016154 315 AINEILRYGSKNRLPE-----GLREQMLAHMQL 342 (394)
Q Consensus 315 ~~~~i~~~m~~~~l~~-----~l~~rv~~y~~~ 342 (394)
+..++++.++.+++|. +|.+|+..|+.-
T Consensus 14 kV~eLK~~L~~rGL~~~G~KaeLieRL~~~l~~ 46 (55)
T 2do1_A 14 KLAELKQECLARGLETKGIKQDLIHRLQAYLEE 46 (55)
T ss_dssp CHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHhc
Confidence 4567888899988885 788888888653
Done!