BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016155
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80UY1|CI041_MOUSE UPF0586 protein C9orf41 homolog OS=Mus musculus PE=2 SV=1
Length = 400
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/260 (50%), Positives = 175/260 (67%), Gaps = 8/260 (3%)
Query: 126 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 184
D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSETGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204
Query: 185 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 244
LA E++ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 205 LAWEVAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 264
Query: 245 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 304
PD+ P S FSM GDF E+Y S+ AWD + TCFFIDTAHN+++YI+ I R
Sbjct: 265 LFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNAWDCIATCFFIDTAHNVIDYIDTIWR 321
Query: 305 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 363
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 322 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFQLEVEKESVLSTYT 378
Query: 364 TNPRSMMQNRYFTAFWTMRK 383
N SMM+ Y + +RK
Sbjct: 379 VNDLSMMKYYYECVLFVVRK 398
>sp|Q5BJZ6|CI041_RAT UPF0586 protein C9orf41 homolog OS=Rattus norvegicus PE=2 SV=1
Length = 400
Score = 269 bits (688), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/260 (50%), Positives = 174/260 (66%), Gaps = 8/260 (3%)
Query: 126 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 184
D+DK++ ++ VRDW+ GK ERD CYKPI++E+ FP R S LVPGAGLGR
Sbjct: 145 DMDKLKSTLKQFVRDWSGTGKAERDACYKPIIKEIIKNFPKERWDPSKVNILVPGAGLGR 204
Query: 185 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 244
LA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 205 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEVDKYKLYPWIHQFSNNRRSADQIRPI 264
Query: 245 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 304
PD+ P S FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I R
Sbjct: 265 FFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWR 321
Query: 305 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 363
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 322 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFQLEVEKESVLSTYT 378
Query: 364 TNPRSMMQNRYFTAFWTMRK 383
N SMM+ Y + +RK
Sbjct: 379 VNDLSMMKYYYECVLFVVRK 398
>sp|Q8N4J0|CI041_HUMAN UPF0586 protein C9orf41 OS=Homo sapiens GN=C9orf41 PE=1 SV=1
Length = 409
Score = 265 bits (676), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 174/260 (66%), Gaps = 8/260 (3%)
Query: 126 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPN-RSKESPPACLVPGAGLGR 184
D+DK++ ++ VRDW+ GK ERD CY+PI++E+ FP R S LVPGAGLGR
Sbjct: 154 DMDKLKSTLKQFVRDWSETGKAERDACYQPIIKEILKNFPKERWDPSKVNILVPGAGLGR 213
Query: 185 LALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV 244
LA EI+ LG+ QGNE+S++M+ S+F+LN ++ +YPWIH N+ +DQ+RP+
Sbjct: 214 LAWEIAMLGYACQGNEWSFFMLFSSNFVLNRCSEINKYKLYPWIHQFSNNRRSADQIRPI 273
Query: 245 SIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR 304
PD+ P S FSM GDF E+Y S+ WD + TCFFIDTAHN+++YI+ I +
Sbjct: 274 FFPDVDPHSLPPGSNFSMTAGDFQEIY---SECNTWDCIATCFFIDTAHNVIDYIDTIWK 330
Query: 305 ILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYT 363
ILK GG+WINLGPLLYHF +L +E+SIELS ED+K V L YGF+ E EK ++ +TYT
Sbjct: 331 ILKPGGIWINLGPLLYHFENL---ANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYT 387
Query: 364 TNPRSMMQNRYFTAFWTMRK 383
N SMM+ Y + +RK
Sbjct: 388 VNDLSMMKYYYECVLFVVRK 407
>sp|Q9I7X6|U586_DROME UPF0586 protein CG11596 OS=Drosophila melanogaster GN=CG11596 PE=1
SV=1
Length = 439
Score = 238 bits (606), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 166/265 (62%), Gaps = 8/265 (3%)
Query: 121 NVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKE-SPPACLVPG 179
NV D+D+ + ++ I RDW+ EG ER+Q YKPI++ + A F + E LVPG
Sbjct: 119 NVRHGDMDQAQSTLKLIARDWSTEGALEREQSYKPIIDSIVAYFKHSDFELKDIKILVPG 178
Query: 180 AGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 239
AGLGRL E++ LG+ +GNEFSY+M+I S+F+LN + ++ +YPW+H N+L D
Sbjct: 179 AGLGRLTYELACLGYSCEGNEFSYFMLIASNFVLNLCDNENKYVLYPWVHQYVNNLRRED 238
Query: 240 QLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYI 299
Q+ PV PD+ P F + GDF+EVY P+ A++ V TCFFID A+N++++I
Sbjct: 239 QVAPVRFPDVCPLKNPPKGHFEIAAGDFLEVYKTPN---AYNCVATCFFIDCANNVIDFI 295
Query: 300 EIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT-I 358
I +IL GG+W+NLGPLLYHF+D+ GQ SIE + ED+ + GF EK +T I
Sbjct: 296 RTIYKILVPGGIWVNLGPLLYHFSDVSGQN---SIEPAFEDLCIIMESVGFVIEKSRTGI 352
Query: 359 ETTYTTNPRSMMQNRYFTAFWTMRK 383
T Y NP SM Q+ Y + FW RK
Sbjct: 353 RTKYAQNPSSMKQSEYQSLFWVCRK 377
>sp|Q9Y7J3|YOI7_SCHPO UPF0586 protein C1778.07 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC1778.07 PE=3 SV=1
Length = 373
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 168/289 (58%), Gaps = 11/289 (3%)
Query: 104 GNASSPA-CDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDA 162
NA+ P C D + +V + + KV ++ I RDW+ E ER Y P +EEL++
Sbjct: 77 ANAAIPVFCSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRTTYAPFIEELNS 136
Query: 163 LFPNRS-KESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGE 221
LFP+ S S LVPG+GLGRLA +I+ GF QGNEFSY+M++ S FILN + +
Sbjct: 137 LFPSDSIDRSKIRVLVPGSGLGRLAFDIAVEGFACQGNEFSYFMLLTSHFILNCVKQENQ 196
Query: 222 WNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAS-AGITEGFSMCGGDFVEVYSDPSQVGAW 280
+ +YP+IHS N + DQ+R ++IPD P+ ++ FSM GDF+EVY ++
Sbjct: 197 FLVYPYIHSFSNHVMRDDQVRSLNIPDAVPSQYLRNSQNFSMAAGDFLEVYGTEESRDSF 256
Query: 281 DAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMS------- 333
V TCFFIDT NI++Y++ I L DGG WINLGPLLYHF G + S
Sbjct: 257 QVVATCFFIDTTKNILDYLDTIKNCLVDGGYWINLGPLLYHFES-EGTSNSNSDSQQQPF 315
Query: 334 IELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMR 382
+EL+LE + V GFE K +++TTY + RSM++ Y +W R
Sbjct: 316 VELTLEQLFYVMDSMGFEVLKHNSVDTTYMGDKRSMLEWIYHPHYWVCR 364
>sp|Q54ST2|U586_DICDI UPF0586 protein OS=Dictyostelium discoideum GN=DDB_G0282239 PE=3
SV=1
Length = 463
Score = 214 bits (546), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 183/302 (60%), Gaps = 27/302 (8%)
Query: 92 NQSCSNDFTDSNGNASSPACDWLDPSI--QLNVPLADVDKVRCIIRNIVRDWAAEGKTER 149
N+ C N F+ S+ N+++ +DP+ + + +D+++ IR +VR+W+ EGK ER
Sbjct: 171 NEHC-NIFSQSSDNSANSE-RIVDPTNLDHIKIDYFMMDQLKSTIRQLVREWSEEGKLER 228
Query: 150 DQCYKPILEELDAL-----FPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY 204
DQ ++PI ++L + F RSK PGAGLGRL LEI+ LGF SQG E+S+
Sbjct: 229 DQAFEPIKQQLLEIYGHIPFQERSK---IRVYSPGAGLGRLCLEIASLGFSSQGIEYSFM 285
Query: 205 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI-----HPASAGITEG 259
M+I S+F+LN E E+ I+P+IH N L D DQLR V+IPD+ P + E
Sbjct: 286 MLIVSNFMLNKVEKINEFKIHPYIHQTVNVLRDIDQLRTVTIPDVLSSELLPKNNPALE- 344
Query: 260 FSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL 319
FSM GDF + + S +D + TCFFIDTA NI+EY++ IS+ILK GG WIN GPLL
Sbjct: 345 FSMSAGDFTKNIEENS----FDCICTCFFIDTAPNILEYVDCISKILKPGGTWINFGPLL 400
Query: 320 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFW 379
YH A + + SIELS E ++ + F+F+KE+ + Y +N +S++++ Y F+
Sbjct: 401 YHHA-----KKKDSIELSYEQLRYLICKKQFQFKKEEIRDAEYCSNQKSLLRSIYKCQFF 455
Query: 380 TM 381
+
Sbjct: 456 VV 457
>sp|P53934|YNJ2_YEAST UPF0586 protein YNL092W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YNL092W PE=1 SV=1
Length = 400
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 144/301 (47%), Gaps = 49/301 (16%)
Query: 126 DVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRL 185
D+ K ++ + R+W+AE +ER+ ++ L L P ++ L+PG G GRL
Sbjct: 98 DMSKTCSLLTQVYREWSAEAISERNCLNSRLVPFLKTLSPPKAD-----ILIPGCGTGRL 152
Query: 186 ALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 245
+++S +G+ +GNEFSY+M++ S ++LN + IYP+IH + DQL P+
Sbjct: 153 LVDLSRMGYNCEGNEFSYHMLLVSQYMLNAGLLQNQIIIYPFIHCFSHWKKIEDQLSPIK 212
Query: 246 IPDIHPASAGITEG-FSMCGGDFVEVY--------------------SDPSQVGAWDAVV 284
+PDI S+ G S+C G FV+ Y S + D VV
Sbjct: 213 VPDIEAWSSNKGMGSMSICAGSFVDCYGRNQGTKISSHYTFSRRMQLSRAKAENSKDVVV 272
Query: 285 TCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDE------------- 331
T FFIDT NI++Y++ I +LK GG+W N GPLLYHF + +G E
Sbjct: 273 TNFFIDTGSNILDYLDTIGHVLKPGGIWCNFGPLLYHFENDHGVETTYEVNPYSGFQDKI 332
Query: 332 ------MSIELSLEDVKRVAL-HYGFEF-EKEKTIETTY--TTNPRSMMQNRYFTAFWTM 381
M +ELS +D+ +A H FE +E I Y P S Y +W +
Sbjct: 333 NDYTPLMGLELSSDDIISIATNHLDFELIRRESGILCGYGRYAGPESCAMPGYMCHYWIL 392
Query: 382 R 382
+
Sbjct: 393 K 393
>sp|Q03648|YM59_YEAST Uncharacterized protein YMR209C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YMR209C PE=1 SV=1
Length = 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 134 IRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLV-PGAGLGRLA--LEIS 190
+ ++ RD+++ ERD I+ ++ + +V PGAG+G L+ L +
Sbjct: 210 LAHLCRDFSSYYSVERDPLQNFIISRINHHVISAGDMKEKILIVTPGAGVGGLSHTLATT 269
Query: 191 HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS-NCNSLSDSDQLRPVSIPDI 249
E S M IC+ F L E + I P++ +C ++ D +QLR +S D+
Sbjct: 270 FPKIQVDSIELSALMYICNLFAL---EYKHDVKIRPFVQQYSCQTVFD-NQLRSLS-ADL 324
Query: 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEY---IEIISR 304
+ G GDF YS S+ +D ++ C +FIDTA N+ EY IE + +
Sbjct: 325 --SKVGHRSNLDPLWGDFTR-YSPISK--DYDKIIICSAYFIDTAENMFEYLSSIEALKK 379
Query: 305 ILKDGGVWINLGPLLY 320
K+ W+N+GPL Y
Sbjct: 380 YCKELH-WVNVGPLKY 394
>sp|Q66L51|COQ5_DANRE 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial
OS=Danio rerio GN=coq5 PE=2 SV=1
Length = 327
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 254 AGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313
AGIT G S GD E+ D Q +D F I +I + ++ R+LK GG ++
Sbjct: 187 AGITTGLSWVAGDAEELPFDDDQ---FDMYTIAFGIRNVTHIEQALQEAFRVLKPGGRFM 243
Query: 314 NL------GPLLYHFADLY 326
L PLL D Y
Sbjct: 244 CLEFSKVTNPLLARLYDAY 262
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,298,553
Number of Sequences: 539616
Number of extensions: 6603134
Number of successful extensions: 15618
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 15509
Number of HSP's gapped (non-prelim): 95
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)