Query 016155
Match_columns 394
No_of_seqs 214 out of 956
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 08:49:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016155.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016155hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4htf_A S-adenosylmethionine-de 99.8 2.1E-17 7.2E-22 156.4 19.6 176 171-386 68-281 (285)
2 2p7i_A Hypothetical protein; p 99.8 6E-18 2.1E-22 154.2 14.5 152 152-356 29-197 (250)
3 2a14_A Indolethylamine N-methy 99.8 4E-18 1.4E-22 161.0 13.6 215 154-385 39-261 (263)
4 3l8d_A Methyltransferase; stru 99.8 4.7E-17 1.6E-21 149.1 20.2 153 154-357 41-199 (242)
5 1pjz_A Thiopurine S-methyltran 99.8 5E-18 1.7E-22 154.7 12.7 150 171-356 22-174 (203)
6 2i62_A Nicotinamide N-methyltr 99.8 1E-17 3.4E-22 155.3 14.8 199 171-385 56-262 (265)
7 2gb4_A Thiopurine S-methyltran 99.7 4E-17 1.4E-21 155.0 18.5 151 171-356 68-225 (252)
8 3pfg_A N-methyltransferase; N, 99.7 3.1E-17 1.1E-21 153.2 17.4 168 155-389 39-254 (263)
9 4gek_A TRNA (CMO5U34)-methyltr 99.7 5.4E-17 1.8E-21 154.9 19.0 159 171-386 70-259 (261)
10 3e8s_A Putative SAM dependent 99.7 9.2E-17 3.2E-21 144.6 19.0 176 128-356 11-207 (227)
11 3e23_A Uncharacterized protein 99.7 6.4E-17 2.2E-21 146.0 17.2 167 156-387 33-204 (211)
12 3g5l_A Putative S-adenosylmeth 99.7 1.2E-16 4.2E-21 148.1 18.6 180 157-385 33-246 (253)
13 3h2b_A SAM-dependent methyltra 99.7 1.3E-16 4.4E-21 143.0 17.9 138 172-357 42-181 (203)
14 1ri5_A MRNA capping enzyme; me 99.7 2.9E-17 1E-21 154.7 13.8 148 171-358 64-250 (298)
15 3lcc_A Putative methyl chlorid 99.7 6.7E-17 2.3E-21 148.5 15.1 139 172-358 67-207 (235)
16 1y8c_A S-adenosylmethionine-de 99.7 2.1E-16 7.2E-21 144.2 18.1 164 171-384 37-245 (246)
17 3dh0_A SAM dependent methyltra 99.7 2.9E-16 9.8E-21 142.0 17.3 140 171-356 37-179 (219)
18 2xvm_A Tellurite resistance pr 99.7 1.4E-16 4.7E-21 141.2 14.6 138 171-356 32-171 (199)
19 2kw5_A SLR1183 protein; struct 99.7 6E-16 2.1E-20 138.5 18.5 138 174-356 32-169 (202)
20 3hnr_A Probable methyltransfer 99.7 7.8E-16 2.7E-20 139.3 19.2 151 152-356 33-199 (220)
21 3dli_A Methyltransferase; PSI- 99.7 2.6E-16 9E-21 145.2 15.9 150 156-356 28-182 (240)
22 3d2l_A SAM-dependent methyltra 99.7 6.7E-16 2.3E-20 141.2 18.4 177 152-384 19-243 (243)
23 2g72_A Phenylethanolamine N-me 99.7 1.3E-16 4.4E-21 151.8 13.8 211 156-387 57-282 (289)
24 3bkw_A MLL3908 protein, S-aden 99.7 3.8E-16 1.3E-20 142.9 15.6 150 159-356 34-212 (243)
25 3ou2_A SAM-dependent methyltra 99.7 8.1E-16 2.8E-20 138.1 16.6 139 171-356 46-203 (218)
26 1wzn_A SAM-dependent methyltra 99.7 1E-15 3.5E-20 141.6 17.4 100 171-314 41-143 (252)
27 3dlc_A Putative S-adenosyl-L-m 99.7 3.4E-16 1.1E-20 140.1 12.9 159 153-356 29-201 (219)
28 3bxo_A N,N-dimethyltransferase 99.7 1.8E-15 6.2E-20 138.0 17.5 107 155-314 29-139 (239)
29 3dtn_A Putative methyltransfer 99.7 3.9E-15 1.3E-19 136.1 19.5 156 154-356 29-212 (234)
30 3sm3_A SAM-dependent methyltra 99.7 2.3E-15 8E-20 136.3 17.7 149 171-356 30-205 (235)
31 2ex4_A Adrenal gland protein A 99.7 6.4E-16 2.2E-20 142.7 14.1 142 171-356 79-223 (241)
32 1vl5_A Unknown conserved prote 99.7 7.6E-16 2.6E-20 143.5 14.1 142 171-355 37-187 (260)
33 1nkv_A Hypothetical protein YJ 99.7 9.9E-16 3.4E-20 141.7 14.5 158 152-355 20-184 (256)
34 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.5E-15 5E-20 140.1 15.6 141 171-356 93-236 (254)
35 3ujc_A Phosphoethanolamine N-m 99.7 2.1E-15 7.1E-20 139.5 16.1 141 171-357 55-205 (266)
36 3bus_A REBM, methyltransferase 99.7 2.5E-15 8.6E-20 140.5 16.6 158 156-357 49-215 (273)
37 1vlm_A SAM-dependent methyltra 99.6 3.2E-15 1.1E-19 136.3 16.7 174 152-384 34-219 (219)
38 3hem_A Cyclopropane-fatty-acyl 99.6 6.3E-15 2.2E-19 140.9 18.3 147 171-362 72-247 (302)
39 2p35_A Trans-aconitate 2-methy 99.6 1.3E-15 4.4E-20 140.9 13.0 136 171-354 33-186 (259)
40 3cgg_A SAM-dependent methyltra 99.6 1E-14 3.6E-19 127.8 18.0 125 171-356 46-173 (195)
41 3cc8_A Putative methyltransfer 99.6 2.1E-15 7.1E-20 135.9 13.8 153 156-359 21-186 (230)
42 3ccf_A Cyclopropane-fatty-acyl 99.6 1.2E-15 4.2E-20 144.0 12.6 138 171-356 57-208 (279)
43 3g2m_A PCZA361.24; SAM-depende 99.6 4.9E-15 1.7E-19 141.5 16.7 116 155-314 70-188 (299)
44 2avn_A Ubiquinone/menaquinone 99.6 1.9E-15 6.5E-20 141.5 13.4 174 125-356 15-211 (260)
45 3i9f_A Putative type 11 methyl 99.6 3.2E-15 1.1E-19 130.2 13.8 130 171-356 17-146 (170)
46 2o57_A Putative sarcosine dime 99.6 3.9E-15 1.3E-19 141.4 15.5 141 171-356 82-232 (297)
47 1kpg_A CFA synthase;, cyclopro 99.6 8.3E-15 2.8E-19 138.4 17.5 155 156-358 52-228 (287)
48 3jwh_A HEN1; methyltransferase 99.6 3.7E-15 1.3E-19 135.2 14.5 149 171-356 29-190 (217)
49 3m70_A Tellurite resistance pr 99.6 4.1E-15 1.4E-19 140.7 15.2 146 154-355 110-257 (286)
50 3f4k_A Putative methyltransfer 99.6 7.6E-15 2.6E-19 135.8 16.6 155 156-356 33-194 (257)
51 3thr_A Glycine N-methyltransfe 99.6 2.5E-14 8.7E-19 135.2 20.2 109 171-314 57-173 (293)
52 1xxl_A YCGJ protein; structura 99.6 7.9E-15 2.7E-19 135.7 15.8 143 171-356 21-172 (239)
53 3kkz_A Uncharacterized protein 99.6 8.8E-15 3E-19 137.1 15.9 156 156-357 33-195 (267)
54 3vc1_A Geranyl diphosphate 2-C 99.6 1.2E-14 4.2E-19 139.9 17.2 155 158-356 106-267 (312)
55 3jwg_A HEN1, methyltransferase 99.6 1E-14 3.4E-19 132.3 15.3 149 171-356 29-190 (219)
56 2yqz_A Hypothetical protein TT 99.6 4.9E-15 1.7E-19 137.0 13.3 159 152-355 22-193 (263)
57 2fk8_A Methoxy mycolic acid sy 99.6 9.8E-15 3.4E-19 140.3 15.6 154 156-357 78-253 (318)
58 3ege_A Putative methyltransfer 99.6 5.6E-15 1.9E-19 138.6 13.1 151 154-357 20-177 (261)
59 1ve3_A Hypothetical protein PH 99.6 3.4E-14 1.2E-18 128.5 17.8 127 141-315 13-141 (227)
60 3gu3_A Methyltransferase; alph 99.6 1.1E-14 3.9E-19 138.4 13.6 155 156-356 9-188 (284)
61 3e05_A Precorrin-6Y C5,15-meth 99.6 2.3E-13 7.8E-18 122.5 19.7 123 171-354 40-164 (204)
62 4hg2_A Methyltransferase type 99.6 1.3E-14 4.4E-19 138.3 11.7 105 156-314 29-133 (257)
63 2p8j_A S-adenosylmethionine-de 99.6 2.8E-14 9.5E-19 127.8 12.6 156 152-356 10-181 (209)
64 4fsd_A Arsenic methyltransfera 99.5 4.6E-14 1.6E-18 140.7 14.3 152 171-355 83-248 (383)
65 3ggd_A SAM-dependent methyltra 99.5 6.3E-14 2.1E-18 129.2 14.2 154 157-356 44-217 (245)
66 3ocj_A Putative exported prote 99.5 1.7E-13 5.9E-18 131.5 17.8 145 171-357 118-290 (305)
67 3g07_A 7SK snRNA methylphospha 99.5 2.6E-14 9E-19 137.1 11.6 198 171-385 46-288 (292)
68 1zx0_A Guanidinoacetate N-meth 99.5 2.8E-14 9.7E-19 131.7 10.9 151 155-352 48-204 (236)
69 3grz_A L11 mtase, ribosomal pr 99.5 7.5E-14 2.6E-18 125.5 13.4 134 155-356 49-183 (205)
70 3mgg_A Methyltransferase; NYSG 99.5 1.1E-13 3.7E-18 129.8 14.6 144 171-356 37-196 (276)
71 4e2x_A TCAB9; kijanose, tetron 99.5 3.5E-14 1.2E-18 142.0 11.7 156 155-357 94-252 (416)
72 2vdw_A Vaccinia virus capping 99.5 1.8E-13 6.2E-18 133.0 15.2 153 171-357 48-245 (302)
73 3njr_A Precorrin-6Y methylase; 99.5 7.1E-13 2.4E-17 120.9 18.1 124 171-356 55-178 (204)
74 3m33_A Uncharacterized protein 99.5 6.6E-14 2.3E-18 128.6 11.2 117 171-356 48-165 (226)
75 3orh_A Guanidinoacetate N-meth 99.5 3.1E-14 1.1E-18 132.7 9.1 153 155-354 48-206 (236)
76 1l3i_A Precorrin-6Y methyltran 99.5 2E-13 6.7E-18 119.4 13.7 154 171-384 33-187 (192)
77 3ofk_A Nodulation protein S; N 99.5 1E-13 3.4E-18 125.2 11.9 142 157-354 40-184 (216)
78 2aot_A HMT, histamine N-methyl 99.5 2.2E-13 7.5E-18 130.0 14.3 191 124-355 9-218 (292)
79 2pxx_A Uncharacterized protein 99.5 1.5E-13 5.1E-18 122.8 11.7 115 153-316 29-159 (215)
80 3mq2_A 16S rRNA methyltransfer 99.5 1.5E-13 5.2E-18 124.7 11.9 149 171-359 27-185 (218)
81 2zfu_A Nucleomethylin, cerebra 99.5 7.8E-13 2.7E-17 119.5 16.5 120 156-356 58-177 (215)
82 1xdz_A Methyltransferase GIDB; 99.5 9.6E-13 3.3E-17 122.1 17.4 129 171-357 70-201 (240)
83 3mti_A RRNA methylase; SAM-dep 99.5 2.4E-13 8.3E-18 120.1 12.6 103 171-314 22-133 (185)
84 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.3E-12 4.3E-17 113.8 16.3 125 171-356 25-151 (178)
85 2yxd_A Probable cobalt-precorr 99.5 1.4E-12 4.9E-17 113.3 16.4 121 171-356 35-155 (183)
86 3bgv_A MRNA CAP guanine-N7 met 99.5 5.9E-13 2E-17 128.0 15.1 165 155-356 23-230 (313)
87 3g5t_A Trans-aconitate 3-methy 99.5 5.1E-13 1.8E-17 127.4 14.6 152 154-350 23-196 (299)
88 3evz_A Methyltransferase; NYSG 99.5 1.3E-12 4.5E-17 119.2 16.2 129 171-356 55-204 (230)
89 2nxc_A L11 mtase, ribosomal pr 99.5 8.6E-13 2.9E-17 124.4 14.9 133 156-356 110-242 (254)
90 3bkx_A SAM-dependent methyltra 99.5 1.3E-12 4.4E-17 122.1 16.0 149 171-358 43-219 (275)
91 3p2e_A 16S rRNA methylase; met 99.5 1.1E-13 3.8E-18 128.7 8.6 171 171-379 24-210 (225)
92 2r3s_A Uncharacterized protein 99.4 1.3E-12 4.6E-17 125.9 16.3 143 171-356 165-321 (335)
93 3g89_A Ribosomal RNA small sub 99.4 2.1E-12 7.2E-17 122.0 17.2 175 127-361 33-215 (249)
94 2gs9_A Hypothetical protein TT 99.4 8.7E-13 3E-17 118.6 13.8 136 157-349 27-171 (211)
95 1nt2_A Fibrillarin-like PRE-rR 99.4 5.8E-12 2E-16 115.8 19.3 131 171-357 57-194 (210)
96 3q87_B N6 adenine specific DNA 99.4 2.1E-12 7.1E-17 114.2 14.5 116 171-356 23-147 (170)
97 1yb2_A Hypothetical protein TA 99.4 1.3E-12 4.6E-17 123.8 13.7 123 171-356 110-235 (275)
98 3mb5_A SAM-dependent methyltra 99.4 1.6E-12 5.3E-17 120.7 13.4 138 152-355 77-219 (255)
99 3r0q_C Probable protein argini 99.4 1.3E-12 4.4E-17 130.5 13.4 112 156-313 51-166 (376)
100 1fbn_A MJ fibrillarin homologu 99.4 9.2E-12 3.2E-16 114.7 17.8 135 171-356 74-211 (230)
101 1jsx_A Glucose-inhibited divis 99.4 5.7E-12 2E-16 112.9 15.8 118 172-356 66-186 (207)
102 1g8a_A Fibrillarin-like PRE-rR 99.4 1E-11 3.5E-16 113.4 17.8 136 171-357 73-211 (227)
103 3mcz_A O-methyltransferase; ad 99.4 7.9E-12 2.7E-16 121.8 18.1 143 172-355 180-336 (352)
104 1x19_A CRTF-related protein; m 99.4 8.6E-12 2.9E-16 122.4 18.3 154 156-356 178-346 (359)
105 3dp7_A SAM-dependent methyltra 99.4 3.3E-12 1.1E-16 126.3 15.2 145 171-356 179-340 (363)
106 3p9n_A Possible methyltransfer 99.4 2.2E-12 7.5E-17 114.9 12.5 115 156-314 33-151 (189)
107 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.7E-12 6E-17 119.9 12.2 137 153-354 81-220 (258)
108 2fyt_A Protein arginine N-meth 99.4 1.7E-12 6E-17 127.8 12.6 101 171-313 64-168 (340)
109 3lpm_A Putative methyltransfer 99.4 1.2E-11 3.9E-16 116.2 17.4 132 171-358 49-201 (259)
110 2qe6_A Uncharacterized protein 99.4 7.3E-12 2.5E-16 119.9 16.2 136 172-355 78-239 (274)
111 3q7e_A Protein arginine N-meth 99.4 1.7E-12 5.8E-17 128.2 11.6 101 171-313 66-170 (349)
112 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.6E-11 5.4E-16 113.0 17.1 135 171-356 77-215 (233)
113 1dus_A MJ0882; hypothetical pr 99.4 7E-12 2.4E-16 109.6 13.9 115 156-315 40-156 (194)
114 1g6q_1 HnRNP arginine N-methyl 99.4 3.7E-12 1.3E-16 124.7 13.2 101 171-313 38-142 (328)
115 3iv6_A Putative Zn-dependent a 99.4 2E-12 7E-17 124.0 11.0 98 171-314 45-146 (261)
116 1qzz_A RDMB, aclacinomycin-10- 99.4 2.4E-11 8.2E-16 119.2 18.8 143 171-357 182-338 (374)
117 1o54_A SAM-dependent O-methylt 99.4 1.8E-11 6E-16 115.9 16.6 138 153-356 97-237 (277)
118 3gwz_A MMCR; methyltransferase 99.4 1.9E-11 6.4E-16 121.1 17.5 153 157-356 191-354 (369)
119 1yzh_A TRNA (guanine-N(7)-)-me 99.3 9.7E-12 3.3E-16 113.0 14.0 129 171-356 41-180 (214)
120 2fca_A TRNA (guanine-N(7)-)-me 99.3 9.9E-12 3.4E-16 113.9 14.1 128 171-355 38-176 (213)
121 3fpf_A Mtnas, putative unchara 99.3 6.9E-12 2.4E-16 122.7 13.5 97 171-314 122-220 (298)
122 3opn_A Putative hemolysin; str 99.3 5.7E-13 2E-17 125.0 5.6 139 171-356 37-182 (232)
123 2frn_A Hypothetical protein PH 99.3 8E-12 2.7E-16 119.4 13.5 128 171-354 125-253 (278)
124 1ws6_A Methyltransferase; stru 99.3 3.1E-12 1.1E-16 110.4 9.3 100 171-314 41-145 (171)
125 3eey_A Putative rRNA methylase 99.3 1.1E-11 3.7E-16 110.4 13.0 104 171-314 22-137 (197)
126 3ntv_A MW1564 protein; rossman 99.3 1.3E-11 4.4E-16 114.2 13.8 104 171-316 71-176 (232)
127 2b3t_A Protein methyltransfera 99.3 3.3E-11 1.1E-15 114.1 16.3 135 156-354 98-259 (276)
128 3u81_A Catechol O-methyltransf 99.3 1.6E-11 5.6E-16 112.2 13.8 141 125-314 20-168 (221)
129 4dzr_A Protein-(glutamine-N5) 99.3 3.3E-12 1.1E-16 113.7 8.9 129 171-356 30-190 (215)
130 2ift_A Putative methylase HI07 99.3 5.8E-12 2E-16 114.3 10.2 104 172-314 54-161 (201)
131 1tw3_A COMT, carminomycin 4-O- 99.3 4.6E-11 1.6E-15 116.8 17.0 143 171-357 183-338 (360)
132 3i53_A O-methyltransferase; CO 99.3 3.6E-11 1.2E-15 116.6 16.1 142 171-356 169-319 (332)
133 3gdh_A Trimethylguanosine synt 99.3 9.5E-13 3.2E-17 121.2 4.4 136 171-354 78-215 (241)
134 2ip2_A Probable phenazine-spec 99.3 4E-11 1.4E-15 116.1 15.9 152 157-356 157-320 (334)
135 2yvl_A TRMI protein, hypotheti 99.3 6.9E-11 2.4E-15 108.5 16.6 136 153-354 76-211 (248)
136 3bwc_A Spermidine synthase; SA 99.3 2.2E-11 7.4E-16 118.2 13.8 138 171-356 95-238 (304)
137 3htx_A HEN1; HEN1, small RNA m 99.3 1.7E-10 5.9E-15 125.9 22.3 149 171-356 721-896 (950)
138 3dmg_A Probable ribosomal RNA 99.3 3.8E-12 1.3E-16 127.9 8.7 116 156-315 219-339 (381)
139 4df3_A Fibrillarin-like rRNA/T 99.3 2.9E-11 1E-15 114.4 14.3 162 137-356 51-215 (233)
140 1ej0_A FTSJ; methyltransferase 99.3 3.7E-11 1.3E-15 102.8 13.6 119 171-356 22-159 (180)
141 3tma_A Methyltransferase; thum 99.3 6.7E-11 2.3E-15 116.3 17.1 140 171-383 203-353 (354)
142 3hp7_A Hemolysin, putative; st 99.3 1.3E-11 4.3E-16 120.4 11.5 149 156-355 73-229 (291)
143 3tfw_A Putative O-methyltransf 99.3 2.6E-11 8.8E-16 113.6 13.2 106 171-317 63-171 (248)
144 2ld4_A Anamorsin; methyltransf 99.3 8.7E-12 3E-16 109.6 9.0 119 171-354 12-131 (176)
145 3lbf_A Protein-L-isoaspartate 99.3 2.5E-11 8.4E-16 109.2 12.0 109 155-314 64-172 (210)
146 2esr_A Methyltransferase; stru 99.3 9.3E-12 3.2E-16 109.1 9.0 103 171-314 31-136 (177)
147 2wa2_A Non-structural protein 99.3 5.9E-12 2E-16 121.4 8.0 174 71-314 1-191 (276)
148 1p91_A Ribosomal RNA large sub 99.3 1.5E-11 5E-16 115.0 10.4 104 156-317 74-179 (269)
149 4hc4_A Protein arginine N-meth 99.3 1.7E-11 5.7E-16 123.5 11.3 118 147-313 65-186 (376)
150 3bzb_A Uncharacterized protein 99.3 3.9E-11 1.3E-15 114.7 13.0 155 156-355 67-234 (281)
151 3id6_C Fibrillarin-like rRNA/T 99.3 2.1E-10 7.2E-15 108.2 17.7 177 138-384 51-231 (232)
152 3dxy_A TRNA (guanine-N(7)-)-me 99.2 9.7E-12 3.3E-16 115.1 8.3 104 171-314 34-148 (218)
153 3uwp_A Histone-lysine N-methyl 99.2 1.9E-11 6.5E-16 124.8 11.0 113 171-316 173-288 (438)
154 3reo_A (ISO)eugenol O-methyltr 99.2 1.8E-10 6.2E-15 114.2 17.4 144 158-356 192-353 (368)
155 3duw_A OMT, O-methyltransferas 99.2 5.6E-11 1.9E-15 108.0 12.6 107 171-318 58-169 (223)
156 2fhp_A Methylase, putative; al 99.2 2.6E-11 8.9E-16 106.3 10.0 104 171-314 44-152 (187)
157 2fpo_A Methylase YHHF; structu 99.2 3.7E-11 1.3E-15 109.0 11.1 101 172-314 55-158 (202)
158 2h00_A Methyltransferase 10 do 99.2 1.8E-11 6.2E-16 113.8 9.3 148 171-356 65-236 (254)
159 2y1w_A Histone-arginine methyl 99.2 3.9E-11 1.3E-15 118.3 12.0 100 171-313 50-152 (348)
160 3dr5_A Putative O-methyltransf 99.2 4E-11 1.4E-15 111.1 11.4 121 155-321 43-167 (221)
161 1o9g_A RRNA methyltransferase; 99.2 3.5E-11 1.2E-15 112.0 10.9 136 171-314 51-212 (250)
162 1wy7_A Hypothetical protein PH 99.2 4.6E-10 1.6E-14 100.6 17.8 121 171-355 49-172 (207)
163 2ozv_A Hypothetical protein AT 99.2 3E-10 1E-14 107.3 17.3 134 171-357 36-193 (260)
164 1i9g_A Hypothetical protein RV 99.2 4.5E-11 1.5E-15 112.3 11.5 141 151-354 82-226 (280)
165 4a6d_A Hydroxyindole O-methylt 99.2 4.3E-10 1.5E-14 111.0 19.0 141 171-356 179-332 (353)
166 3p9c_A Caffeic acid O-methyltr 99.2 1.5E-10 5.3E-15 114.7 15.6 146 157-356 189-351 (364)
167 1vbf_A 231AA long hypothetical 99.2 7E-11 2.4E-15 107.7 12.1 109 153-314 55-163 (231)
168 3tr6_A O-methyltransferase; ce 99.2 4.3E-11 1.5E-15 108.7 10.6 115 156-317 55-175 (225)
169 3lst_A CALO1 methyltransferase 99.2 1E-10 3.4E-15 114.7 13.7 139 171-356 184-334 (348)
170 3fzg_A 16S rRNA methylase; met 99.2 2.2E-11 7.5E-16 112.7 7.7 123 145-316 28-152 (200)
171 3cbg_A O-methyltransferase; cy 99.2 1.6E-10 5.4E-15 107.1 13.0 104 171-315 72-181 (232)
172 1fp1_D Isoliquiritigenin 2'-O- 99.2 9.9E-11 3.4E-15 115.7 11.8 145 158-356 198-358 (372)
173 1fp2_A Isoflavone O-methyltran 99.2 1.3E-10 4.5E-15 113.8 12.5 133 171-356 188-339 (352)
174 3ckk_A TRNA (guanine-N(7)-)-me 99.2 5E-11 1.7E-15 111.6 9.0 110 171-314 46-166 (235)
175 3c3p_A Methyltransferase; NP_9 99.2 8.6E-11 3E-15 106.2 10.2 100 171-314 56-158 (210)
176 3tm4_A TRNA (guanine N2-)-meth 99.2 5.2E-10 1.8E-14 111.4 16.8 125 171-357 217-351 (373)
177 2igt_A SAM dependent methyltra 99.2 2.9E-10 9.9E-15 112.1 14.7 134 171-356 153-302 (332)
178 3lec_A NADB-rossmann superfami 99.2 5.2E-10 1.8E-14 105.7 15.8 134 157-356 12-147 (230)
179 1u2z_A Histone-lysine N-methyl 99.2 8.6E-11 2.9E-15 120.3 10.8 130 154-317 228-360 (433)
180 3kr9_A SAM-dependent methyltra 99.2 7.5E-10 2.6E-14 104.2 16.3 134 157-356 6-141 (225)
181 2yxe_A Protein-L-isoaspartate 99.2 1.6E-10 5.6E-15 104.1 11.3 110 154-314 63-175 (215)
182 2pjd_A Ribosomal RNA small sub 99.2 7.1E-11 2.4E-15 115.9 9.5 114 156-317 184-304 (343)
183 1ne2_A Hypothetical protein TA 99.1 9E-10 3.1E-14 98.6 15.3 113 171-354 51-166 (200)
184 2gpy_A O-methyltransferase; st 99.1 1.4E-10 4.8E-15 106.5 9.4 104 171-315 54-159 (233)
185 3gnl_A Uncharacterized protein 99.1 8.8E-10 3E-14 105.0 15.1 134 157-356 12-147 (244)
186 1sui_A Caffeoyl-COA O-methyltr 99.1 1.9E-10 6.6E-15 108.1 10.4 112 156-314 70-188 (247)
187 3b3j_A Histone-arginine methyl 99.1 1.4E-10 4.7E-15 119.9 10.2 100 171-313 158-260 (480)
188 1nv8_A HEMK protein; class I a 99.1 3.3E-10 1.1E-14 109.0 11.8 101 171-314 123-247 (284)
189 4dcm_A Ribosomal RNA large sub 99.1 3.7E-10 1.3E-14 113.0 12.6 117 157-316 211-334 (375)
190 3r3h_A O-methyltransferase, SA 99.1 6.4E-11 2.2E-15 111.1 6.5 103 171-314 60-168 (242)
191 2plw_A Ribosomal RNA methyltra 99.1 2.9E-10 9.9E-15 101.3 10.4 46 155-203 9-58 (201)
192 3adn_A Spermidine synthase; am 99.1 3.2E-10 1.1E-14 110.1 11.3 108 171-314 83-196 (294)
193 1dl5_A Protein-L-isoaspartate 99.1 3.3E-10 1.1E-14 109.8 11.4 113 155-318 62-178 (317)
194 2bm8_A Cephalosporin hydroxyla 99.1 8.5E-11 2.9E-15 109.8 6.9 122 172-353 82-214 (236)
195 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.4E-10 8.1E-15 106.4 9.8 112 171-314 49-171 (246)
196 4azs_A Methyltransferase WBDD; 99.1 1.4E-10 4.9E-15 121.6 8.8 102 171-312 66-169 (569)
197 2avd_A Catechol-O-methyltransf 99.1 6.4E-10 2.2E-14 101.2 11.7 105 171-316 69-179 (229)
198 2hnk_A SAM-dependent O-methylt 99.1 2.5E-10 8.7E-15 105.5 8.7 103 171-314 60-179 (239)
199 3c3y_A Pfomt, O-methyltransfer 99.1 5.4E-10 1.8E-14 104.0 10.9 112 156-314 61-179 (237)
200 2pbf_A Protein-L-isoaspartate 99.1 2.6E-10 9E-15 103.8 8.3 101 171-314 80-191 (227)
201 1af7_A Chemotaxis receptor met 99.1 2.4E-10 8.3E-15 110.2 8.4 121 171-313 105-249 (274)
202 3dou_A Ribosomal RNA large sub 99.1 4.8E-10 1.6E-14 101.6 9.7 152 155-385 12-182 (191)
203 1zg3_A Isoflavanone 4'-O-methy 99.0 8.2E-10 2.8E-14 108.4 11.3 134 171-356 193-345 (358)
204 1jg1_A PIMT;, protein-L-isoasp 99.0 1E-09 3.4E-14 101.2 10.5 108 156-314 79-187 (235)
205 1i1n_A Protein-L-isoaspartate 99.0 7.9E-10 2.7E-14 100.6 9.4 101 171-314 77-180 (226)
206 1xj5_A Spermidine synthase 1; 99.0 1.5E-09 5.3E-14 107.2 12.2 109 171-315 120-234 (334)
207 1uir_A Polyamine aminopropyltr 99.0 9.4E-10 3.2E-14 107.2 10.4 108 171-314 77-193 (314)
208 2qm3_A Predicted methyltransfe 99.0 5.3E-09 1.8E-13 104.0 15.7 127 171-354 172-305 (373)
209 2nyu_A Putative ribosomal RNA 99.0 8.9E-10 3E-14 97.5 8.9 94 171-314 22-143 (196)
210 2ih2_A Modification methylase 99.0 3.3E-09 1.1E-13 105.4 13.8 130 154-350 25-186 (421)
211 2b78_A Hypothetical protein SM 99.0 1.5E-09 5.2E-14 108.7 11.4 136 171-359 212-363 (385)
212 3gjy_A Spermidine synthase; AP 99.0 1.3E-09 4.3E-14 107.5 10.5 103 172-314 90-198 (317)
213 3k6r_A Putative transferase PH 99.0 2.1E-09 7.1E-14 104.0 11.6 146 141-355 108-254 (278)
214 1r18_A Protein-L-isoaspartate( 99.0 9.8E-10 3.3E-14 100.6 8.8 104 171-317 84-196 (227)
215 1mjf_A Spermidine synthase; sp 99.0 1.3E-09 4.5E-14 104.4 9.9 112 171-314 75-191 (281)
216 2b25_A Hypothetical protein; s 99.0 1.3E-09 4.3E-14 106.2 9.8 129 152-317 89-220 (336)
217 2i7c_A Spermidine synthase; tr 99.0 2.1E-09 7.2E-14 103.2 11.1 108 171-315 78-191 (283)
218 1zq9_A Probable dimethyladenos 99.0 5.1E-09 1.7E-13 100.6 13.7 112 156-313 16-144 (285)
219 2oxt_A Nucleoside-2'-O-methylt 99.0 6.2E-10 2.1E-14 106.5 7.1 99 171-314 74-183 (265)
220 3sso_A Methyltransferase; macr 99.0 8.6E-10 2.9E-14 112.2 8.3 146 152-351 201-360 (419)
221 3giw_A Protein of unknown func 99.0 2E-09 7E-14 104.3 10.6 173 132-355 43-244 (277)
222 2o07_A Spermidine synthase; st 99.0 1.7E-09 5.9E-14 105.2 10.2 107 171-314 95-207 (304)
223 1ixk_A Methyltransferase; open 99.0 5.6E-09 1.9E-13 101.7 13.7 130 171-355 118-272 (315)
224 1inl_A Spermidine synthase; be 99.0 2.3E-09 7.8E-14 103.7 10.7 107 171-314 90-203 (296)
225 1iy9_A Spermidine synthase; ro 98.9 1.7E-09 5.8E-14 103.5 8.8 107 171-314 75-187 (275)
226 2pt6_A Spermidine synthase; tr 98.9 2.7E-09 9.4E-14 104.5 10.3 107 171-314 116-228 (321)
227 2b2c_A Spermidine synthase; be 98.9 2.2E-09 7.6E-14 105.1 9.4 107 171-314 108-220 (314)
228 3a27_A TYW2, uncharacterized p 98.9 2.6E-09 8.8E-14 101.8 9.0 97 171-314 119-217 (272)
229 2p41_A Type II methyltransfera 98.9 6.3E-09 2.2E-13 101.4 11.7 97 171-314 82-189 (305)
230 2okc_A Type I restriction enzy 98.9 2.3E-08 7.8E-13 101.7 15.3 119 155-317 158-308 (445)
231 2f8l_A Hypothetical protein LM 98.9 2.8E-08 9.4E-13 97.4 15.0 125 171-351 130-279 (344)
232 2cmg_A Spermidine synthase; tr 98.9 4.4E-09 1.5E-13 100.3 8.8 98 171-314 72-169 (262)
233 4dmg_A Putative uncharacterize 98.8 8.4E-09 2.9E-13 104.1 10.3 102 171-314 214-324 (393)
234 2h1r_A Dimethyladenosine trans 98.8 1.3E-08 4.3E-13 98.6 11.2 96 171-310 42-153 (299)
235 3c0k_A UPF0064 protein YCCW; P 98.8 1.8E-08 6.2E-13 100.7 12.5 106 171-314 220-337 (396)
236 1qam_A ERMC' methyltransferase 98.8 2.1E-08 7.2E-13 94.1 11.9 52 156-210 18-69 (244)
237 3frh_A 16S rRNA methylase; met 98.8 6.8E-08 2.3E-12 92.3 15.3 152 145-356 85-239 (253)
238 2as0_A Hypothetical protein PH 98.8 9.7E-09 3.3E-13 102.6 9.2 106 171-314 217-333 (396)
239 1wxx_A TT1595, hypothetical pr 98.8 3.6E-08 1.2E-12 98.3 12.6 104 172-314 210-323 (382)
240 3ajd_A Putative methyltransfer 98.8 1.3E-08 4.6E-13 96.7 8.9 133 171-355 83-238 (274)
241 3v97_A Ribosomal RNA large sub 98.8 2.5E-08 8.4E-13 107.6 11.0 140 171-366 539-692 (703)
242 2xyq_A Putative 2'-O-methyl tr 98.7 3E-08 1E-12 96.4 9.7 111 171-355 63-194 (290)
243 2yx1_A Hypothetical protein MJ 98.7 2.3E-08 7.9E-13 98.2 8.9 120 171-356 195-315 (336)
244 1yub_A Ermam, rRNA methyltrans 98.7 8.5E-09 2.9E-13 96.2 5.5 111 156-314 17-143 (245)
245 2yxl_A PH0851 protein, 450AA l 98.7 2.4E-07 8.3E-12 94.4 14.2 131 171-354 259-415 (450)
246 3ldu_A Putative methylase; str 98.6 1.1E-07 3.9E-12 95.4 11.1 113 156-313 183-341 (385)
247 3k0b_A Predicted N6-adenine-sp 98.6 1.7E-07 5.9E-12 94.5 11.4 101 171-313 201-347 (393)
248 3ldg_A Putative uncharacterize 98.6 4.3E-07 1.5E-11 91.4 13.5 101 171-313 194-340 (384)
249 3lcv_B Sisomicin-gentamicin re 98.6 1.4E-07 4.9E-12 91.1 8.8 156 145-356 111-270 (281)
250 3m4x_A NOL1/NOP2/SUN family pr 98.5 3.7E-07 1.3E-11 94.0 11.7 131 171-355 105-260 (456)
251 3gru_A Dimethyladenosine trans 98.5 4.1E-07 1.4E-11 88.6 11.3 85 156-287 38-122 (295)
252 2jjq_A Uncharacterized RNA met 98.5 6.8E-07 2.3E-11 90.9 13.0 94 171-314 290-385 (425)
253 2frx_A Hypothetical protein YE 98.5 2.2E-07 7.4E-12 96.1 8.8 102 171-313 117-243 (479)
254 1sqg_A SUN protein, FMU protei 98.5 3.4E-07 1.2E-11 92.6 10.0 130 171-354 246-400 (429)
255 1uwv_A 23S rRNA (uracil-5-)-me 98.5 7.7E-07 2.6E-11 90.3 12.5 124 171-356 286-412 (433)
256 2ar0_A M.ecoki, type I restric 98.5 1.4E-06 4.9E-11 91.2 14.2 144 155-348 156-333 (541)
257 3fut_A Dimethyladenosine trans 98.4 1.1E-06 3.8E-11 84.4 12.0 97 156-301 35-133 (271)
258 2qfm_A Spermine synthase; sper 98.4 3.6E-07 1.2E-11 91.7 8.6 113 171-314 188-312 (364)
259 3m6w_A RRNA methylase; rRNA me 98.4 2.4E-07 8.4E-12 95.5 6.8 130 171-355 101-256 (464)
260 3b5i_A S-adenosyl-L-methionine 98.4 9.4E-06 3.2E-10 81.6 17.0 65 294-358 203-298 (374)
261 3tqs_A Ribosomal RNA small sub 98.4 1.1E-06 3.9E-11 83.5 9.8 52 156-210 17-68 (255)
262 3bt7_A TRNA (uracil-5-)-methyl 98.4 7.5E-07 2.6E-11 88.3 8.7 137 155-357 201-350 (369)
263 2dul_A N(2),N(2)-dimethylguano 98.4 9.1E-07 3.1E-11 88.8 9.3 111 172-313 48-161 (378)
264 4gqb_A Protein arginine N-meth 98.3 6.2E-07 2.1E-11 95.8 7.7 118 152-313 336-464 (637)
265 3khk_A Type I restriction-modi 98.3 7E-06 2.4E-10 86.1 15.0 128 173-350 246-419 (544)
266 3v97_A Ribosomal RNA large sub 98.3 3.9E-06 1.3E-10 90.5 13.1 105 171-314 190-345 (703)
267 3lkd_A Type I restriction-modi 98.3 2.1E-05 7.3E-10 82.4 17.1 132 171-350 221-381 (542)
268 3ua3_A Protein arginine N-meth 98.1 4.5E-06 1.5E-10 90.0 9.3 116 156-313 396-531 (745)
269 1qyr_A KSGA, high level kasuga 98.1 7.3E-06 2.5E-10 77.7 9.4 50 156-210 9-60 (252)
270 2r6z_A UPF0341 protein in RSP 98.1 1.1E-06 3.9E-11 83.5 3.6 40 171-210 83-129 (258)
271 3ftd_A Dimethyladenosine trans 98.1 1.1E-05 3.8E-10 76.2 9.9 51 156-209 19-70 (249)
272 3o4f_A Spermidine synthase; am 98.1 1.1E-05 3.7E-10 78.8 9.9 108 171-314 83-196 (294)
273 2efj_A 3,7-dimethylxanthine me 98.1 3.6E-05 1.2E-09 77.6 14.1 98 261-358 131-292 (384)
274 2oyr_A UPF0341 protein YHIQ; a 98.1 2.2E-06 7.4E-11 82.0 4.8 104 173-310 90-194 (258)
275 3axs_A Probable N(2),N(2)-dime 98.1 5.1E-06 1.8E-10 83.9 7.3 99 171-313 52-155 (392)
276 3uzu_A Ribosomal RNA small sub 98.0 9.9E-06 3.4E-10 78.0 8.5 40 171-210 42-85 (279)
277 2qy6_A UPF0209 protein YFCK; s 98.0 1.6E-05 5.5E-10 75.7 9.6 145 171-356 60-233 (257)
278 1m6e_X S-adenosyl-L-methionnin 98.0 1.9E-05 6.5E-10 79.0 10.1 148 171-356 51-278 (359)
279 1m6y_A S-adenosyl-methyltransf 98.0 1.2E-05 4E-10 78.4 8.2 40 171-210 26-67 (301)
280 3s1s_A Restriction endonucleas 98.0 4.4E-05 1.5E-09 83.5 12.5 138 171-354 321-492 (878)
281 2k4m_A TR8_protein, UPF0146 pr 97.9 1.7E-05 5.9E-10 70.3 6.9 45 156-205 25-71 (153)
282 3ll7_A Putative methyltransfer 97.9 1.2E-05 4.2E-10 81.7 6.6 40 172-211 94-133 (410)
283 2b9e_A NOL1/NOP2/SUN domain fa 97.8 8.7E-05 3E-09 72.3 10.3 40 171-210 102-144 (309)
284 3cvo_A Methyltransferase-like 97.7 0.00034 1.2E-08 64.6 11.8 99 171-313 30-151 (202)
285 3c6k_A Spermine synthase; sper 97.7 7.7E-05 2.6E-09 75.2 8.0 113 171-314 205-329 (381)
286 3evf_A RNA-directed RNA polyme 97.6 0.00027 9.2E-09 68.3 11.2 164 152-388 59-231 (277)
287 2zig_A TTHA0409, putative modi 97.5 0.00016 5.5E-09 69.4 7.4 54 156-213 224-277 (297)
288 2wk1_A NOVP; transferase, O-me 97.4 0.00093 3.2E-08 64.6 11.9 158 133-314 70-242 (282)
289 4auk_A Ribosomal RNA large sub 97.4 0.0019 6.5E-08 64.9 13.3 121 171-353 211-335 (375)
290 2c7p_A Modification methylase 97.2 0.013 4.4E-07 57.4 16.6 40 171-210 10-50 (327)
291 3ufb_A Type I restriction-modi 97.1 0.0034 1.2E-07 65.5 12.8 40 171-210 217-271 (530)
292 1wg8_A Predicted S-adenosylmet 96.9 0.0019 6.5E-08 62.7 7.6 40 171-210 22-61 (285)
293 3gcz_A Polyprotein; flavivirus 96.8 0.0011 3.9E-08 64.1 5.8 50 152-205 75-126 (282)
294 3g7u_A Cytosine-specific methy 96.8 0.015 5.1E-07 58.1 13.3 38 173-210 3-41 (376)
295 2px2_A Genome polyprotein [con 96.7 0.0027 9.1E-08 61.0 7.2 96 170-314 72-181 (269)
296 3ubt_Y Modification methylase 96.7 0.044 1.5E-06 52.5 15.8 148 173-384 1-163 (331)
297 1g55_A DNA cytosine methyltran 96.6 0.017 5.7E-07 56.8 12.6 39 172-210 2-43 (343)
298 3eld_A Methyltransferase; flav 96.5 0.0045 1.5E-07 60.4 7.6 73 125-205 43-117 (300)
299 1g60_A Adenine-specific methyl 96.2 0.0084 2.9E-07 56.3 7.1 51 156-210 201-251 (260)
300 4fzv_A Putative methyltransfer 96.1 0.021 7.1E-07 56.9 9.5 108 171-313 148-281 (359)
301 1rjd_A PPM1P, carboxy methyl t 95.5 0.13 4.6E-06 50.4 12.8 158 171-351 97-281 (334)
302 3qv2_A 5-cytosine DNA methyltr 95.4 0.14 4.9E-06 50.1 12.6 40 171-210 9-52 (327)
303 3r24_A NSP16, 2'-O-methyl tran 95.1 0.061 2.1E-06 52.8 8.5 91 262-384 156-257 (344)
304 4h0n_A DNMT2; SAH binding, tra 95.1 0.27 9.3E-06 48.1 13.3 37 173-209 4-43 (333)
305 3vyw_A MNMC2; tRNA wobble urid 95.0 0.014 4.6E-07 57.3 3.7 72 260-356 168-246 (308)
306 1pqw_A Polyketide synthase; ro 94.9 0.019 6.6E-07 50.6 4.1 37 171-207 38-77 (198)
307 3lkz_A Non-structural protein 94.7 0.085 2.9E-06 51.7 8.3 44 156-203 83-128 (321)
308 3me5_A Cytosine-specific methy 94.1 0.98 3.4E-05 46.6 15.3 53 157-209 70-126 (482)
309 2dph_A Formaldehyde dismutase; 94.1 0.023 7.8E-07 56.2 2.9 40 171-210 185-227 (398)
310 3s2e_A Zinc-containing alcohol 93.9 0.046 1.6E-06 52.6 4.7 41 170-210 165-207 (340)
311 1f8f_A Benzyl alcohol dehydrog 93.8 0.077 2.6E-06 51.7 6.1 41 170-210 189-232 (371)
312 3m6i_A L-arabinitol 4-dehydrog 93.8 0.097 3.3E-06 50.7 6.7 40 171-210 179-221 (363)
313 2zig_A TTHA0409, putative modi 93.7 0.096 3.3E-06 49.9 6.3 91 259-355 21-133 (297)
314 1pl8_A Human sorbitol dehydrog 93.6 0.18 6E-06 48.9 8.2 39 171-209 171-212 (356)
315 3two_A Mannitol dehydrogenase; 93.6 0.16 5.5E-06 48.9 7.8 38 171-208 176-215 (348)
316 4ej6_A Putative zinc-binding d 93.5 0.087 3E-06 51.6 5.9 40 171-210 182-224 (370)
317 1v3u_A Leukotriene B4 12- hydr 93.5 0.3 1E-05 46.6 9.5 38 171-208 145-185 (333)
318 1uuf_A YAHK, zinc-type alcohol 93.4 0.11 3.9E-06 50.8 6.6 39 171-209 194-234 (369)
319 3fpc_A NADP-dependent alcohol 93.4 0.079 2.7E-06 51.2 5.3 40 171-210 166-208 (352)
320 3ip1_A Alcohol dehydrogenase, 93.0 0.11 3.7E-06 51.5 5.7 41 170-210 212-255 (404)
321 1e3j_A NADP(H)-dependent ketos 92.7 0.13 4.6E-06 49.6 5.9 40 171-210 168-209 (352)
322 3gms_A Putative NADPH:quinone 92.5 0.064 2.2E-06 51.6 3.1 39 170-208 143-184 (340)
323 2eih_A Alcohol dehydrogenase; 92.4 0.13 4.4E-06 49.5 5.2 40 170-209 165-207 (343)
324 4b7c_A Probable oxidoreductase 92.3 0.075 2.6E-06 50.9 3.4 38 170-207 148-188 (336)
325 3uko_A Alcohol dehydrogenase c 92.3 0.56 1.9E-05 45.7 9.7 41 170-210 192-235 (378)
326 2hcy_A Alcohol dehydrogenase 1 92.3 0.075 2.6E-06 51.3 3.4 38 171-208 169-209 (347)
327 2j3h_A NADP-dependent oxidored 92.2 0.11 3.8E-06 49.8 4.5 37 171-207 155-194 (345)
328 3qwb_A Probable quinone oxidor 92.1 0.074 2.5E-06 51.0 3.1 40 170-209 147-189 (334)
329 3nx4_A Putative oxidoreductase 92.0 0.24 8.1E-06 47.0 6.5 36 174-209 149-187 (324)
330 3p8z_A Mtase, non-structural p 92.0 0.59 2E-05 44.5 9.0 95 171-313 78-183 (267)
331 4eye_A Probable oxidoreductase 91.9 0.16 5.4E-06 49.0 5.3 39 170-208 158-199 (342)
332 1i4w_A Mitochondrial replicati 91.9 0.3 1E-05 48.4 7.3 36 172-207 59-96 (353)
333 3goh_A Alcohol dehydrogenase, 91.8 0.43 1.5E-05 45.2 8.1 37 170-207 141-179 (315)
334 3swr_A DNA (cytosine-5)-methyl 91.8 3.1 0.00011 46.7 15.9 40 170-209 538-579 (1002)
335 3jyn_A Quinone oxidoreductase; 91.7 0.077 2.6E-06 50.7 2.7 40 170-209 139-181 (325)
336 1boo_A Protein (N-4 cytosine-s 91.4 0.41 1.4E-05 46.3 7.5 52 156-211 241-292 (323)
337 4dkj_A Cytosine-specific methy 91.4 2.9 9.8E-05 42.1 13.9 40 171-210 9-55 (403)
338 1cdo_A Alcohol dehydrogenase; 91.3 1.1 3.6E-05 43.6 10.4 40 170-209 191-233 (374)
339 1p0f_A NADP-dependent alcohol 91.3 0.49 1.7E-05 46.0 8.0 40 170-209 190-232 (373)
340 2d8a_A PH0655, probable L-thre 91.2 0.2 7E-06 48.2 5.2 39 171-209 167-208 (348)
341 2fzw_A Alcohol dehydrogenase c 91.1 1 3.5E-05 43.6 10.1 41 170-210 189-232 (373)
342 3uog_A Alcohol dehydrogenase; 91.0 0.44 1.5E-05 46.3 7.3 40 170-209 188-229 (363)
343 1rjw_A ADH-HT, alcohol dehydro 90.9 0.22 7.7E-06 47.8 5.0 38 171-208 164-203 (339)
344 1piw_A Hypothetical zinc-type 90.8 0.15 5.1E-06 49.5 3.8 38 171-208 179-218 (360)
345 2jhf_A Alcohol dehydrogenase E 90.7 0.6 2.1E-05 45.3 8.0 40 170-209 190-232 (374)
346 1iz0_A Quinone oxidoreductase; 90.6 0.096 3.3E-06 49.4 2.2 37 171-207 125-164 (302)
347 2c0c_A Zinc binding alcohol de 90.6 0.2 6.7E-06 48.9 4.4 38 171-208 163-203 (362)
348 1wly_A CAAR, 2-haloacrylate re 90.5 0.12 4.2E-06 49.4 2.9 38 171-208 145-185 (333)
349 1yb5_A Quinone oxidoreductase; 90.5 0.16 5.6E-06 49.3 3.7 38 170-207 169-209 (351)
350 2h6e_A ADH-4, D-arabinose 1-de 90.5 0.22 7.6E-06 47.9 4.6 39 171-209 170-212 (344)
351 1qor_A Quinone oxidoreductase; 90.5 0.11 3.9E-06 49.4 2.5 38 171-208 140-180 (327)
352 1e3i_A Alcohol dehydrogenase, 90.3 1.4 4.9E-05 42.6 10.3 40 170-209 194-236 (376)
353 2dq4_A L-threonine 3-dehydroge 90.2 0.15 5.1E-06 49.1 3.1 36 171-206 164-202 (343)
354 4dup_A Quinone oxidoreductase; 90.1 0.32 1.1E-05 47.0 5.5 41 170-210 166-209 (353)
355 3pvc_A TRNA 5-methylaminomethy 90.0 0.49 1.7E-05 50.1 7.2 74 259-356 149-231 (689)
356 2j8z_A Quinone oxidoreductase; 89.8 0.32 1.1E-05 47.1 5.2 40 170-209 161-203 (354)
357 1vj0_A Alcohol dehydrogenase, 89.8 0.27 9.2E-06 48.2 4.7 39 171-209 195-236 (380)
358 3jv7_A ADH-A; dehydrogenase, n 89.2 0.39 1.3E-05 46.1 5.2 40 171-210 171-213 (345)
359 3c85_A Putative glutathione-re 89.2 0.98 3.3E-05 39.1 7.4 36 171-206 38-76 (183)
360 2zb4_A Prostaglandin reductase 89.0 0.24 8.3E-06 47.8 3.6 37 171-207 158-200 (357)
361 4a0s_A Octenoyl-COA reductase/ 88.9 0.65 2.2E-05 46.3 6.8 40 170-209 219-261 (447)
362 1boo_A Protein (N-4 cytosine-s 88.8 1.1 3.8E-05 43.2 8.2 88 259-354 14-116 (323)
363 3krt_A Crotonyl COA reductase; 88.8 0.56 1.9E-05 47.1 6.2 40 170-209 227-269 (456)
364 3h2s_A Putative NADH-flavin re 88.4 2.1 7E-05 37.5 9.0 33 174-206 2-37 (224)
365 3e8x_A Putative NAD-dependent 88.3 1.7 5.9E-05 38.7 8.5 36 171-206 20-58 (236)
366 3oig_A Enoyl-[acyl-carrier-pro 88.2 1.4 4.9E-05 40.1 8.2 36 171-206 6-46 (266)
367 1xa0_A Putative NADPH dependen 88.0 0.38 1.3E-05 45.7 4.2 34 174-207 152-188 (328)
368 4ft4_B DNA (cytosine-5)-methyl 88.0 12 0.0004 40.2 16.3 39 171-209 211-256 (784)
369 3dqp_A Oxidoreductase YLBE; al 87.6 1.7 5.7E-05 38.3 8.0 29 174-203 2-34 (219)
370 2cf5_A Atccad5, CAD, cinnamyl 87.4 1 3.5E-05 43.5 6.9 36 171-206 180-217 (357)
371 1tt7_A YHFP; alcohol dehydroge 87.0 0.52 1.8E-05 44.9 4.5 33 174-206 153-188 (330)
372 2oo3_A Protein involved in cat 86.9 0.92 3.2E-05 43.8 6.2 138 153-356 80-224 (283)
373 3gaz_A Alcohol dehydrogenase s 86.6 0.83 2.8E-05 43.9 5.7 37 170-207 149-188 (343)
374 2vhw_A Alanine dehydrogenase; 86.6 0.45 1.5E-05 47.1 3.9 34 171-206 167-204 (377)
375 1yqd_A Sinapyl alcohol dehydro 86.5 0.79 2.7E-05 44.5 5.6 36 171-206 187-224 (366)
376 1eg2_A Modification methylase 86.4 1.1 3.7E-05 43.5 6.4 51 156-210 231-284 (319)
377 3kkj_A Amine oxidase, flavin-c 86.3 0.4 1.4E-05 40.7 3.0 29 174-202 4-34 (336)
378 2b5w_A Glucose dehydrogenase; 86.1 0.78 2.7E-05 44.3 5.3 32 173-204 174-210 (357)
379 4e21_A 6-phosphogluconate dehy 85.9 4.4 0.00015 39.8 10.7 115 172-354 22-138 (358)
380 3p2y_A Alanine dehydrogenase/p 85.6 0.55 1.9E-05 47.1 4.0 36 171-206 183-220 (381)
381 1g60_A Adenine-specific methyl 85.3 2.5 8.4E-05 39.2 8.1 76 261-355 6-96 (260)
382 2hwk_A Helicase NSP2; rossman 85.1 1.7 5.8E-05 42.3 6.9 227 75-384 37-297 (320)
383 2vz8_A Fatty acid synthase; tr 85.1 0.44 1.5E-05 58.2 3.5 78 277-355 1309-1392(2512)
384 3ggo_A Prephenate dehydrogenas 84.7 5.4 0.00018 38.2 10.5 36 172-207 33-72 (314)
385 4dgk_A Phytoene dehydrogenase; 84.5 0.43 1.5E-05 47.6 2.6 31 173-203 2-34 (501)
386 2eez_A Alanine dehydrogenase; 84.5 0.97 3.3E-05 44.4 5.1 36 171-206 165-202 (369)
387 4dvj_A Putative zinc-dependent 84.5 1.4 4.6E-05 42.9 6.2 39 171-209 171-213 (363)
388 2cdc_A Glucose dehydrogenase g 84.3 1.7 5.8E-05 42.1 6.7 32 172-203 181-214 (366)
389 3grk_A Enoyl-(acyl-carrier-pro 84.2 5.6 0.00019 37.2 10.1 35 171-205 30-69 (293)
390 3ius_A Uncharacterized conserv 84.1 8.6 0.0003 34.8 11.2 30 173-204 6-39 (286)
391 3gqv_A Enoyl reductase; medium 84.0 1 3.6E-05 43.8 5.1 37 170-207 163-202 (371)
392 4dll_A 2-hydroxy-3-oxopropiona 83.7 4.4 0.00015 38.6 9.3 36 171-206 30-67 (320)
393 3ce6_A Adenosylhomocysteinase; 83.6 3.1 0.00011 43.0 8.7 36 171-206 273-310 (494)
394 1l7d_A Nicotinamide nucleotide 83.6 0.78 2.7E-05 45.3 4.0 36 171-206 171-208 (384)
395 3g0o_A 3-hydroxyisobutyrate de 83.4 3.3 0.00011 39.0 8.2 35 172-206 7-43 (303)
396 3tos_A CALS11; methyltransfera 83.2 19 0.00065 33.9 13.3 163 128-314 20-215 (257)
397 4e12_A Diketoreductase; oxidor 82.9 4.7 0.00016 37.6 9.0 36 173-208 5-42 (283)
398 3av4_A DNA (cytosine-5)-methyl 82.9 17 0.00057 42.1 14.9 40 171-210 850-891 (1330)
399 1y1p_A ARII, aldehyde reductas 82.8 13 0.00046 34.2 12.1 35 171-205 10-47 (342)
400 1zcj_A Peroxisomal bifunctiona 82.8 10 0.00035 38.3 12.0 38 171-208 36-75 (463)
401 4dio_A NAD(P) transhydrogenase 82.6 1.1 3.7E-05 45.3 4.7 37 171-207 189-227 (405)
402 2vn8_A Reticulon-4-interacting 82.6 0.79 2.7E-05 44.6 3.6 36 170-206 182-220 (375)
403 1x13_A NAD(P) transhydrogenase 82.5 0.68 2.3E-05 46.3 3.1 36 171-206 171-208 (401)
404 3ew7_A LMO0794 protein; Q8Y8U8 82.1 5.1 0.00017 34.6 8.4 32 174-205 2-36 (221)
405 4gbj_A 6-phosphogluconate dehy 81.7 14 0.00047 35.0 11.9 112 173-354 6-120 (297)
406 3o26_A Salutaridine reductase; 80.9 12 0.00041 34.2 10.8 36 171-206 11-49 (311)
407 2g76_A 3-PGDH, D-3-phosphoglyc 80.7 2.3 7.8E-05 41.6 6.1 36 279-316 219-255 (335)
408 3ps9_A TRNA 5-methylaminomethy 79.9 5.3 0.00018 41.9 9.0 133 170-354 65-237 (676)
409 3pxx_A Carveol dehydrogenase; 79.7 5.9 0.0002 36.2 8.3 32 171-202 9-43 (287)
410 1pjc_A Protein (L-alanine dehy 79.6 1.6 5.6E-05 42.6 4.7 36 171-206 166-203 (361)
411 2ekl_A D-3-phosphoglycerate de 79.5 1.8 6.1E-05 41.7 4.8 32 171-204 141-176 (313)
412 1eg2_A Modification methylase 79.3 6 0.0002 38.2 8.5 85 260-355 39-137 (319)
413 3qiv_A Short-chain dehydrogena 79.2 23 0.00079 31.5 12.1 36 171-206 8-46 (253)
414 2f1k_A Prephenate dehydrogenas 79.1 8.3 0.00028 35.3 9.1 33 174-206 2-36 (279)
415 3gpi_A NAD-dependent epimerase 78.8 7.2 0.00025 35.5 8.6 29 172-202 3-35 (286)
416 3tqh_A Quinone oxidoreductase; 78.4 1.8 6E-05 41.1 4.4 34 170-203 151-187 (321)
417 2duw_A Putative COA-binding pr 78.1 8 0.00027 32.8 8.1 56 278-356 69-124 (145)
418 4eez_A Alcohol dehydrogenase 1 78.1 4.6 0.00016 38.3 7.2 39 171-209 163-204 (348)
419 2g5c_A Prephenate dehydrogenas 78.1 15 0.0005 33.8 10.5 33 174-206 3-39 (281)
420 3k96_A Glycerol-3-phosphate de 77.6 11 0.00036 36.9 9.9 101 172-314 29-131 (356)
421 4ezb_A Uncharacterized conserv 77.6 20 0.00068 34.1 11.6 31 173-203 25-58 (317)
422 4a2c_A Galactitol-1-phosphate 77.2 2.5 8.4E-05 40.2 5.0 40 171-210 160-202 (346)
423 3tka_A Ribosomal RNA small sub 77.1 3.8 0.00013 40.6 6.3 40 171-210 57-99 (347)
424 3k6j_A Protein F01G10.3, confi 76.9 12 0.0004 38.3 10.2 34 171-204 53-88 (460)
425 2iid_A L-amino-acid oxidase; f 76.8 2.6 8.9E-05 42.0 5.3 49 153-203 16-66 (498)
426 3qha_A Putative oxidoreductase 76.7 4.8 0.00016 37.8 6.9 35 172-206 15-51 (296)
427 3d64_A Adenosylhomocysteinase; 76.5 4.2 0.00014 42.0 6.8 33 171-205 276-312 (494)
428 1wwk_A Phosphoglycerate dehydr 76.4 2.8 9.7E-05 40.2 5.2 32 171-204 141-176 (307)
429 2g1u_A Hypothetical protein TM 75.9 2.4 8.2E-05 35.7 4.1 35 171-205 18-54 (155)
430 4hb9_A Similarities with proba 75.8 1.8 6.1E-05 41.2 3.6 29 173-201 2-32 (412)
431 3slk_A Polyketide synthase ext 75.5 0.63 2.2E-05 50.6 0.4 34 170-203 344-380 (795)
432 3llv_A Exopolyphosphatase-rela 75.4 3.3 0.00011 33.9 4.8 35 172-206 6-42 (141)
433 2uyo_A Hypothetical protein ML 75.4 10 0.00035 36.4 8.9 143 173-354 104-275 (310)
434 2bka_A CC3, TAT-interacting pr 75.3 8.2 0.00028 34.1 7.7 32 172-203 18-54 (242)
435 3d4o_A Dipicolinate synthase s 75.2 14 0.00047 34.7 9.6 33 171-205 154-190 (293)
436 1v8b_A Adenosylhomocysteinase; 75.1 4.6 0.00016 41.6 6.7 33 171-205 256-292 (479)
437 3gvp_A Adenosylhomocysteinase 75.0 2.2 7.6E-05 43.5 4.2 35 171-205 219-255 (435)
438 4hy3_A Phosphoglycerate oxidor 74.5 2.9 0.0001 41.5 4.9 31 171-203 175-209 (365)
439 3tjr_A Short chain dehydrogena 74.1 32 0.0011 32.0 11.8 36 171-206 30-68 (301)
440 2rir_A Dipicolinate synthase, 73.9 14 0.00048 34.7 9.3 34 171-206 156-193 (300)
441 3ka7_A Oxidoreductase; structu 73.9 2 6.7E-05 41.6 3.4 30 174-203 2-33 (425)
442 3ond_A Adenosylhomocysteinase; 73.4 10 0.00035 39.2 8.7 36 171-206 264-301 (488)
443 3nrn_A Uncharacterized protein 72.5 2.2 7.6E-05 41.4 3.4 29 174-202 2-32 (421)
444 3d1l_A Putative NADP oxidoredu 72.3 16 0.00055 33.2 9.1 35 172-206 10-47 (266)
445 1mv8_A GMD, GDP-mannose 6-dehy 72.0 15 0.00052 36.5 9.5 34 174-207 2-37 (436)
446 3rp8_A Flavoprotein monooxygen 72.0 2.5 8.7E-05 40.8 3.7 33 171-203 22-56 (407)
447 3gg2_A Sugar dehydrogenase, UD 72.0 14 0.00048 37.3 9.3 35 173-207 3-39 (450)
448 4e5n_A Thermostable phosphite 71.7 3.3 0.00011 40.2 4.4 31 171-203 144-178 (330)
449 3dfz_A SIRC, precorrin-2 dehyd 71.6 10 0.00034 35.0 7.5 40 162-201 21-62 (223)
450 3fwz_A Inner membrane protein 71.6 4.7 0.00016 33.4 4.8 37 171-207 6-44 (140)
451 3lyl_A 3-oxoacyl-(acyl-carrier 71.3 54 0.0019 28.9 12.3 36 171-206 4-42 (247)
452 4a27_A Synaptic vesicle membra 70.6 2.1 7.2E-05 41.1 2.7 34 170-204 141-178 (349)
453 4f6c_A AUSA reductase domain p 70.6 28 0.00096 33.8 10.9 33 171-204 68-104 (427)
454 3oz2_A Digeranylgeranylglycero 70.6 2.3 8E-05 39.9 3.0 29 174-202 6-36 (397)
455 2cvz_A Dehydrogenase, 3-hydrox 70.4 13 0.00046 33.9 8.1 32 174-206 3-36 (289)
456 3c24_A Putative oxidoreductase 70.3 9.2 0.00031 35.4 7.0 34 173-206 12-48 (286)
457 1gdh_A D-glycerate dehydrogena 70.3 4.2 0.00014 39.2 4.8 31 171-203 145-180 (320)
458 3obb_A Probable 3-hydroxyisobu 70.2 25 0.00086 33.3 10.2 34 173-206 4-39 (300)
459 1kol_A Formaldehyde dehydrogen 70.1 5.1 0.00018 39.0 5.4 40 171-210 185-227 (398)
460 4a7p_A UDP-glucose dehydrogena 69.9 11 0.00039 38.1 8.1 36 171-206 7-44 (446)
461 3dme_A Conserved exported prot 69.5 2.7 9.2E-05 39.2 3.2 30 173-202 5-36 (369)
462 3sju_A Keto reductase; short-c 68.9 62 0.0021 29.6 12.4 36 171-206 23-61 (279)
463 3uf0_A Short-chain dehydrogena 68.2 55 0.0019 29.9 11.9 33 171-203 30-65 (273)
464 2bcg_G Secretory pathway GDP d 67.7 2.9 9.8E-05 41.7 3.1 31 172-202 11-43 (453)
465 3k7m_X 6-hydroxy-L-nicotine ox 67.6 3 0.0001 40.5 3.1 29 174-202 3-33 (431)
466 2qrv_A DNA (cytosine-5)-methyl 67.2 7.2 0.00025 37.3 5.7 40 170-209 14-56 (295)
467 4gde_A UDP-galactopyranose mut 67.2 2.8 9.4E-05 41.6 2.8 32 172-203 10-44 (513)
468 3i4f_A 3-oxoacyl-[acyl-carrier 67.2 41 0.0014 30.1 10.6 33 171-203 6-41 (264)
469 3r1i_A Short-chain type dehydr 66.9 45 0.0015 30.6 11.0 36 171-206 31-69 (276)
470 3gg9_A D-3-phosphoglycerate de 66.7 4.3 0.00015 40.0 4.0 33 171-203 159-193 (352)
471 2ew2_A 2-dehydropantoate 2-red 66.5 36 0.0012 31.1 10.3 34 173-206 4-39 (316)
472 3r6d_A NAD-dependent epimerase 66.5 9.3 0.00032 33.4 5.9 32 173-204 6-41 (221)
473 3tri_A Pyrroline-5-carboxylate 66.2 24 0.00082 32.9 9.0 34 173-206 4-42 (280)
474 4iin_A 3-ketoacyl-acyl carrier 66.0 57 0.0019 29.5 11.4 32 171-202 28-62 (271)
475 1y81_A Conserved hypothetical 65.5 41 0.0014 28.1 9.6 53 279-354 69-121 (138)
476 2dbq_A Glyoxylate reductase; D 65.3 5.8 0.0002 38.4 4.6 32 171-204 149-184 (334)
477 3iei_A Leucine carboxyl methyl 65.1 1E+02 0.0035 29.8 16.8 164 172-356 91-279 (334)
478 3n58_A Adenosylhomocysteinase; 65.1 12 0.0004 38.5 7.0 48 156-205 233-282 (464)
479 3dje_A Fructosyl amine: oxygen 65.0 4.1 0.00014 39.7 3.5 31 172-202 6-39 (438)
480 3dhn_A NAD-dependent epimerase 64.9 10 0.00034 33.1 5.8 31 173-203 5-38 (227)
481 1jvb_A NAD(H)-dependent alcoho 64.7 7.3 0.00025 37.1 5.2 39 171-209 170-212 (347)
482 2gcg_A Glyoxylate reductase/hy 64.7 7.4 0.00025 37.5 5.2 33 171-203 154-188 (330)
483 4egf_A L-xylulose reductase; s 64.7 77 0.0026 28.6 12.1 36 171-206 19-57 (266)
484 2jae_A L-amino acid oxidase; o 64.3 4.5 0.00015 40.1 3.7 33 171-203 10-44 (489)
485 3ucx_A Short chain dehydrogena 64.2 82 0.0028 28.3 12.6 36 171-206 10-48 (264)
486 1ryi_A Glycine oxidase; flavop 64.1 4 0.00014 38.7 3.2 32 171-202 16-49 (382)
487 1dxy_A D-2-hydroxyisocaproate 63.7 6.3 0.00021 38.2 4.5 31 171-203 144-178 (333)
488 3pi7_A NADH oxidoreductase; gr 63.6 3.7 0.00013 39.3 2.8 36 173-208 166-204 (349)
489 3rkr_A Short chain oxidoreduct 63.5 68 0.0023 28.8 11.4 36 171-206 28-66 (262)
490 3ihm_A Styrene monooxygenase A 63.3 3.9 0.00013 40.4 3.1 30 173-202 23-54 (430)
491 3cgv_A Geranylgeranyl reductas 63.3 4.2 0.00014 38.6 3.2 31 173-203 5-37 (397)
492 3tfo_A Putative 3-oxoacyl-(acy 63.0 81 0.0028 28.7 11.9 35 172-206 4-41 (264)
493 3itj_A Thioredoxin reductase 1 63.0 3 0.0001 38.5 2.0 32 171-202 21-54 (338)
494 2oln_A NIKD protein; flavoprot 62.9 4.4 0.00015 38.8 3.3 30 173-202 5-36 (397)
495 2e1m_A L-glutamate oxidase; L- 62.8 4.8 0.00017 39.8 3.6 32 171-202 43-76 (376)
496 3evt_A Phosphoglycerate dehydr 62.7 3.6 0.00012 40.0 2.6 33 171-203 136-170 (324)
497 3pgx_A Carveol dehydrogenase; 62.4 87 0.003 28.4 12.0 32 171-202 14-48 (280)
498 3nix_A Flavoprotein/dehydrogen 62.3 4.1 0.00014 39.2 2.9 30 173-202 6-37 (421)
499 2vou_A 2,6-dihydroxypyridine h 62.2 5.3 0.00018 38.6 3.7 33 171-203 4-38 (397)
500 1sez_A Protoporphyrinogen oxid 62.2 4.6 0.00016 40.1 3.3 32 172-203 13-46 (504)
No 1
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.76 E-value=2.1e-17 Score=156.36 Aligned_cols=176 Identities=13% Similarity=0.078 Sum_probs=123.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~---------------------------------- 113 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK---------------------------------- 113 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-----------------------------------
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 3579999999999999999999999999999999997766332110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc-----------
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL----------- 319 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLl----------- 319 (394)
....++.++.+|+.++.. ...++||+|++...+...++...++++++++|||||+++-..|..
T Consensus 114 ----~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (285)
T 4htf_A 114 ----GVSDNMQFIHCAAQDVAS--HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAG 187 (285)
T ss_dssp ----CCGGGEEEEESCGGGTGG--GCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTT
T ss_pred ----CCCcceEEEEcCHHHhhh--hcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhc
Confidence 011347899999988642 236899999998877777788899999999999999998532211
Q ss_pred -hhhh--hccC---CCCCccccCCHHHHHHHHHhCCCEEEEEeec--cccCCCCcc-------------------ccccc
Q 016155 320 -YHFA--DLYG---QEDEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPR-------------------SMMQN 372 (394)
Q Consensus 320 -yh~~--~~~g---~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i--~~~Y~~d~~-------------------sm~~~ 372 (394)
|.+. .... ........++.+++.++++++||++++...+ ...|..+.. .-+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~ 267 (285)
T 4htf_A 188 NFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYIT 267 (285)
T ss_dssp CHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEESSSGGGCSSTTHHHHTHHHHHHHHHHHTTSTTGGG
T ss_pred CHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEEEeeecccccccCcccHHHHHHHHHHhcCCChHHH
Confidence 1100 0000 0111234579999999999999999986643 334443321 11223
Q ss_pred ccceEEEEEEEcCc
Q 016155 373 RYFTAFWTMRKKSV 386 (394)
Q Consensus 373 ~Y~~~f~va~K~~~ 386 (394)
..+-..+||||+.+
T Consensus 268 ~~~~~~~varK~~~ 281 (285)
T 4htf_A 268 LGRYIHVTARKPQS 281 (285)
T ss_dssp GCSEEEEEEECCCC
T ss_pred HHhheEEEEEcCCc
Confidence 34557889999854
No 2
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.76 E-value=6e-18 Score=154.21 Aligned_cols=152 Identities=15% Similarity=0.154 Sum_probs=112.6
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.+..+++.|.... ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 29 ~~~~~~~~l~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------ 84 (250)
T 2p7i_A 29 MHPFMVRAFTPFF------RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL------------------ 84 (250)
T ss_dssp HHHHHHHHHGGGC------CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS------------------
T ss_pred HHHHHHHHHHhhc------CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhh------------------
Confidence 3455666666543 3558999999999999999999999999999999996555110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHH-HhccCCc
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS-RILKDGG 310 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~-~~LKpGG 310 (394)
+ .++.++.+|+.++. .+++||+|++...|...++...+|++++ ++|||||
T Consensus 85 ---------------~----------~~v~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 85 ---------------K----------DGITYIHSRFEDAQ----LPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGG 135 (250)
T ss_dssp ---------------C----------SCEEEEESCGGGCC----CSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEE
T ss_pred ---------------h----------CCeEEEEccHHHcC----cCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCC
Confidence 0 03788999998863 2578999999988877778889999999 9999999
Q ss_pred EEEEecCcchhhhhc----cCC------------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 311 VWINLGPLLYHFADL----YGQ------------EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 311 ~wIN~GPLlyh~~~~----~g~------------~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+++-..|........ .+. .......++.++++++++++||++++..
T Consensus 136 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 998644432111000 000 0011235799999999999999999865
No 3
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.76 E-value=4e-18 Score=161.00 Aligned_cols=215 Identities=16% Similarity=0.128 Sum_probs=125.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
..++..|.+.+... ..++.+|||+|||+|.++..++..|+ .|+|+|+|..||..++--++.. ...+..-|.+..-+
T Consensus 39 ~~~~~~~~~~~~~~-~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~--~~~~d~s~~~~~~~ 115 (263)
T 2a14_A 39 KFNLECLHKTFGPG-GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE--PGAYDWTPAVKFAC 115 (263)
T ss_dssp HHHHHHHHHHHSTT-SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC--TTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC--CCcccchHHHHHHH
Confidence 34556666665321 22567999999999999999999998 5999999999998776433211 00111111000000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcee-EEecccccccCC-CCCCCCccEEEEecccCC----hhhHHHHHHHHHHhc
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFS-MCGGDFVEVYSD-PSQVGAWDAVVTCFFIDT----AHNIVEYIEIISRIL 306 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls-~~~GDf~ely~~-~~~~~~fD~VvT~fFlDt----a~ni~~yl~~I~~~L 306 (394)
+...... .++... .....++. ++.+|+++.... +...++||+|++.+.|+. .+++...+++|+++|
T Consensus 116 ~~~~~~~-----~~~~~~---~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~L 187 (263)
T 2a14_A 116 ELEGNSG-----RWEEKE---EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLL 187 (263)
T ss_dssp HHTTCGG-----GHHHHH---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE
T ss_pred hcCCCCc-----chhhHH---HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHc
Confidence 0000000 000000 00001233 788898773211 112468999999986654 367788999999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccce-EEEEEEEcC
Q 016155 307 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFT-AFWTMRKKS 385 (394)
Q Consensus 307 KpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~-~f~va~K~~ 385 (394)
||||++|-.+++.-.+.. .|........++.++|+++++++||++++.......|..+ + ..|.. .|++|||+.
T Consensus 188 KPGG~li~~~~~~~~~~~-~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~---~--~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYM-VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVT---N--AANNGVCCIVARKKP 261 (263)
T ss_dssp EEEEEEEEEEESSCCEEE-ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTT---T--CCCCCEEEEEEEECC
T ss_pred CCCcEEEEEEeecCccce-eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccc---c--CCCCceEEEEEEecC
Confidence 999999975543211000 1110011235799999999999999999866433333221 1 23433 456899974
No 4
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.76 E-value=4.7e-17 Score=149.07 Aligned_cols=153 Identities=18% Similarity=0.230 Sum_probs=116.0
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
..+++.|.+.++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 41 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 95 (242)
T 3l8d_A 41 STIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG-------------------- 95 (242)
T ss_dssp TTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--------------------
T ss_pred HHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--------------------
Confidence 357888888776 4669999999999999999999999999999999986554110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...++.++.+|+.++. ...++||+|++...+...++...+++.++++|||||++|
T Consensus 96 ----------------------~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 150 (242)
T 3l8d_A 96 ----------------------EGPDLSFIKGDLSSLP---FENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYAC 150 (242)
T ss_dssp ----------------------CBTTEEEEECBTTBCS---SCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccCCceEEEcchhcCC---CCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEE
Confidence 0123788999988763 346899999999888877889999999999999999998
Q ss_pred Ee--cCcchh----hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 314 NL--GPLLYH----FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 314 N~--GPLlyh----~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
-. +|.... +....+ .+.....++.+++.++++++||++++...
T Consensus 151 i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 151 IAILGPTAKPRENSYPRLYG-KDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp EEEECTTCGGGGGGGGGGGT-CCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEcCCcchhhhhhhhhhcc-ccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 53 222111 111111 11123357999999999999999998663
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.75 E-value=5e-18 Score=154.70 Aligned_cols=150 Identities=18% Similarity=0.152 Sum_probs=99.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..||++|+.|+|+|+|..||..++-.... . .. .....+ ....
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~---~--~~----~~~~~~-------~~~~------ 79 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE---Q--PH----ITSQGD-------FKVY------ 79 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS---C--SE----EEEETT-------EEEE------
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccC---C--cc----cccccc-------cccc------
Confidence 567999999999999999999999999999999999776522110 0 00 000000 0000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCC-CCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQV-GAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~-~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
...++.++.+|+.++.. .. ++||+|++...+. +.++...++++++++|||||+++-+. +.|... ...
T Consensus 80 -----~~~~v~~~~~d~~~l~~---~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~-~~~~~~-~~~ 149 (203)
T 1pjz_A 80 -----AAPGIEIWCGDFFALTA---RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT-LEYDQA-LLE 149 (203)
T ss_dssp -----ECSSSEEEEECCSSSTH---HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE-ESSCSS-SSS
T ss_pred -----cCCccEEEECccccCCc---ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE-EecCcc-ccC
Confidence 01247899999988632 22 6899999764433 23456789999999999999833211 112111 111
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
++ .+.++.+|+++++.+ ||+++..+
T Consensus 150 ~~---~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 150 GP---PFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp SC---CCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CC---CCCCCHHHHHHHhcC-CcEEEEec
Confidence 12 345899999999988 99988754
No 6
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=1e-17 Score=155.31 Aligned_cols=199 Identities=15% Similarity=0.195 Sum_probs=122.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..++..|+ .|+|+|+|..|+..++..+.......++ -|++...++........ ++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~ 128 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDW--SPVVTYVCDLEGNRMKG-----PEK 128 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCC--HHHHHHHHHHTTTCSCH-----HHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccc--hhhhhhhhcccccccch-----HHH
Confidence 567999999999999999999999 9999999999997766433211000000 00000000000000000 000
Q ss_pred CCCCCCCCCce-eEEecccccccC-CCCCCCCccEEEEecccC----ChhhHHHHHHHHHHhccCCcEEEEecCcchhhh
Q 016155 250 HPASAGITEGF-SMCGGDFVEVYS-DPSQVGAWDAVVTCFFID----TAHNIVEYIEIISRILKDGGVWINLGPLLYHFA 323 (394)
Q Consensus 250 ~p~~~~~~~~l-s~~~GDf~ely~-~~~~~~~fD~VvT~fFlD----ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~ 323 (394)
. .....++ .+..+|+.+... .+...++||+|++.+.+. ..+++..+|+.++++|||||++|-..++...+.
T Consensus 129 ~---~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~ 205 (265)
T 2i62_A 129 E---EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY 205 (265)
T ss_dssp H---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE
T ss_pred H---HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE
Confidence 0 0001126 788899887532 111227899999988776 677889999999999999999996544321111
Q ss_pred hccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEE-EEEEcC
Q 016155 324 DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFW-TMRKKS 385 (394)
Q Consensus 324 ~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~-va~K~~ 385 (394)
.. +........++.+++.++++++||++++.......|.... ..|...|+ +|+|+.
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~K~~ 262 (265)
T 2i62_A 206 MI-GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTT-----SNNEGLFSLVGRKPG 262 (265)
T ss_dssp EE-TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTT-----BCCCCEEEEEEECCC
T ss_pred Ec-CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccc-----cccceEEEEEecccc
Confidence 11 1111123467999999999999999998775555554322 34555555 677753
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.75 E-value=4e-17 Score=154.98 Aligned_cols=151 Identities=13% Similarity=0.053 Sum_probs=101.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||||||+|+++..||++|+.|+|+|+|..|+..++-..+. .++ .+++.
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~-----~~~----------------------~~~~~ 120 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL-----SYT----------------------EEPLA 120 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC-----CEE----------------------EEECT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc-----ccc----------------------ccccc
Confidence 567999999999999999999999999999999999766421110 000 00000
Q ss_pred CCC-C----CCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhh
Q 016155 251 PAS-A----GITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFA 323 (394)
Q Consensus 251 p~~-~----~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~ 323 (394)
... . ....++.+.++|+.++.. ...++||+|+....+. ..++...|++.++++|||||+++-+.. .|...
T Consensus 121 ~~~~~~~~~~~~~~i~~~~~D~~~l~~--~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~-~~~~~ 197 (252)
T 2gb4_A 121 EIAGAKVFKSSSGSISLYCCSIFDLPR--ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL-SYDPT 197 (252)
T ss_dssp TSTTCEEEEETTSSEEEEESCTTTGGG--GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE-ECCTT
T ss_pred ccccccccccCCCceEEEECccccCCc--ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE-ecCCc
Confidence 000 0 011358999999998743 1137899999764433 234577899999999999999953210 11111
Q ss_pred hccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 324 DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 324 ~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..+++ .+.++.+||.+++.. +|+++..+
T Consensus 198 -~~~g~---~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 198 -KHAGP---PFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp -SCCCS---SCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred -cCCCC---CCCCCHHHHHHHhhC-CeEEEEEe
Confidence 11112 345899999999977 69998855
No 8
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.75 E-value=3.1e-17 Score=153.19 Aligned_cols=168 Identities=14% Similarity=0.053 Sum_probs=116.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+++.|...++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 39 ~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--------------------- 92 (263)
T 3pfg_A 39 DLAALVRRHSP-----KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN--------------------- 92 (263)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHhhCC-----CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC---------------------
Confidence 46667776665 4579999999999999999999999999999999997655110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-c---cCChhhHHHHHHHHHHhccCCc
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F---IDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-F---lDta~ni~~yl~~I~~~LKpGG 310 (394)
.++.++.+|+.++.. .++||+|++.+ . +.+..++..+|+.++++|||||
T Consensus 93 -----------------------~~~~~~~~d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 145 (263)
T 3pfg_A 93 -----------------------PDAVLHHGDMRDFSL----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDG 145 (263)
T ss_dssp -----------------------TTSEEEECCTTTCCC----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECChHHCCc----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCc
Confidence 026788999887532 58899999876 4 4444678899999999999999
Q ss_pred EEEEe---cCcch---------------------hhhhc---------c----CCCC-------CccccCCHHHHHHHHH
Q 016155 311 VWINL---GPLLY---------------------HFADL---------Y----GQED-------EMSIELSLEDVKRVAL 346 (394)
Q Consensus 311 ~wIN~---GPLly---------------------h~~~~---------~----g~~~-------~~~ieLS~eEl~~ll~ 346 (394)
++|-- .|-.+ +.... + .+.. .....++.+|++++++
T Consensus 146 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~ 225 (263)
T 3pfg_A 146 VVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFT 225 (263)
T ss_dssp EEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHH
T ss_pred EEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHH
Confidence 99952 11111 00000 0 0000 0012468999999999
Q ss_pred hCCCEEEEEeeccccCCCCcccccccccceEEEEEEEcCcccc
Q 016155 347 HYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKKSVTIV 389 (394)
Q Consensus 347 ~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~K~~~~~~ 389 (394)
++||+++.... . .-...+||++|+.....
T Consensus 226 ~aGF~v~~~~~---~-----------~~~~~~~va~K~a~~~~ 254 (263)
T 3pfg_A 226 AAGLSVEFMPG---G-----------PSGRGLFTGLPGAKGET 254 (263)
T ss_dssp HTTEEEEEESS---T-----------TTSSCEEEEEECC----
T ss_pred HCCCEEEEeeC---C-----------CCCceeEEEecCCCCcc
Confidence 99999987531 1 12456899999855443
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.74 E-value=5.4e-17 Score=154.86 Aligned_cols=159 Identities=16% Similarity=0.117 Sum_probs=109.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCcccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 246 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~i 246 (394)
++.+|||+|||+|+++..||++ |+.|+|+|+|..||..|+-.+...
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~------------------------------ 119 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY------------------------------ 119 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS------------------------------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh------------------------------
Confidence 5779999999999999999986 779999999999998776332110
Q ss_pred CCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCcc-----
Q 016155 247 PDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLL----- 319 (394)
Q Consensus 247 PDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKpGG~wIN~GPLl----- 319 (394)
....++.++.||+.++. .+.||+|++.+.|.. .++...+|++|+++|||||++|...+..
T Consensus 120 --------~~~~~v~~~~~D~~~~~-----~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~ 186 (261)
T 4gek_A 120 --------KAPTPVDVIEGDIRDIA-----IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAK 186 (261)
T ss_dssp --------CCSSCEEEEESCTTTCC-----CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHH
T ss_pred --------ccCceEEEeeccccccc-----ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHH
Confidence 01234889999998863 256999998764432 3456689999999999999999642211
Q ss_pred --------hh-hhhccCCCC-----------CccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEE
Q 016155 320 --------YH-FADLYGQED-----------EMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFW 379 (394)
Q Consensus 320 --------yh-~~~~~g~~~-----------~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~ 379 (394)
|+ |....|..+ .....+|.++++++|+++||+.++... | .++-.=|
T Consensus 187 ~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~f-------------q-~~nF~~~ 252 (261)
T 4gek_A 187 VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWF-------------Q-CFNFGSL 252 (261)
T ss_dssp HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEE-------------E-ETTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEE-------------E-eccEEEE
Confidence 11 111111000 011246899999999999999876431 1 1122338
Q ss_pred EEEEcCc
Q 016155 380 TMRKKSV 386 (394)
Q Consensus 380 va~K~~~ 386 (394)
||+|...
T Consensus 253 iA~K~~~ 259 (261)
T 4gek_A 253 VALKAED 259 (261)
T ss_dssp EEECCTT
T ss_pred EEEEcCC
Confidence 9999854
No 10
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.74 E-value=9.2e-17 Score=144.58 Aligned_cols=176 Identities=14% Similarity=0.142 Sum_probs=115.7
Q ss_pred HHHHHHHHHHhhcCccc----ChhHHh-hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCC
Q 016155 128 DKVRCIIRNIVRDWAAE----GKTERD-QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFS 202 (394)
Q Consensus 128 ~kv~~~L~q~~RDWS~e----g~~ER~-~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S 202 (394)
+++..........|... .-..|. .....+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s 83 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGR-------QPERVLDLGCGEGWLLRALADRGIEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHT-------CCSEEEEETCTTCHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcC-------CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC
Confidence 45555555556666542 111111 1122344444432 45799999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCC-CCCCcc
Q 016155 203 YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPS-QVGAWD 281 (394)
Q Consensus 203 ~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~-~~~~fD 281 (394)
..|+..++.. .+..+..+|+.++...+. ..++||
T Consensus 84 ~~~~~~a~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 84 RTLVDAARAA---------------------------------------------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHHHHT---------------------------------------------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHHHHHh---------------------------------------------cccccchhhHHhhcccccccCCCcc
Confidence 9999655411 013456677766521111 235699
Q ss_pred EEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhc----------c-C---C-CCCccccCCHHHHHHHHH
Q 016155 282 AVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADL----------Y-G---Q-EDEMSIELSLEDVKRVAL 346 (394)
Q Consensus 282 ~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~----------~-g---~-~~~~~ieLS~eEl~~ll~ 346 (394)
+|++.+.+. ..++..+++.++++|||||++|-..|..+..... + + . .+.....++.++++++++
T Consensus 119 ~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (227)
T 3e8s_A 119 LICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALD 197 (227)
T ss_dssp EEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHH
T ss_pred EEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHH
Confidence 999988777 6778899999999999999999643321111100 0 0 0 011123459999999999
Q ss_pred hCCCEEEEEe
Q 016155 347 HYGFEFEKEK 356 (394)
Q Consensus 347 ~~GF~ii~e~ 356 (394)
++||+++...
T Consensus 198 ~aGf~~~~~~ 207 (227)
T 3e8s_A 198 MAGLRLVSLQ 207 (227)
T ss_dssp HTTEEEEEEE
T ss_pred HcCCeEEEEe
Confidence 9999999855
No 11
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.74 E-value=6.4e-17 Score=146.03 Aligned_cols=167 Identities=17% Similarity=0.091 Sum_probs=114.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
.+..+...++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+
T Consensus 33 ~~~~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~---------------------- 85 (211)
T 3e23_A 33 TLTKFLGELP-----AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRL---------------------- 85 (211)
T ss_dssp HHHHHHTTSC-----TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------------------
T ss_pred HHHHHHHhcC-----CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhc----------------------
Confidence 4444444443 4679999999999999999999999999999999996554211
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wI 313 (394)
++.+..+|+.++. ..++||+|++...+... +++..+|+.++++|||||++|
T Consensus 86 -----------------------~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 138 (211)
T 3e23_A 86 -----------------------GRPVRTMLFHQLD----AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFY 138 (211)
T ss_dssp -----------------------TSCCEECCGGGCC----CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -----------------------CCceEEeeeccCC----CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEE
Confidence 1345667877753 36899999988655544 478899999999999999998
Q ss_pred EecCcchh-hhhccCCCCCccccCCHHHHHHHHHhCC-CEEEEEe-eccccCCCCcccccccccceEEEEEEEcCcc
Q 016155 314 NLGPLLYH-FADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKEK-TIETTYTTNPRSMMQNRYFTAFWTMRKKSVT 387 (394)
Q Consensus 314 N~GPLlyh-~~~~~g~~~~~~ieLS~eEl~~ll~~~G-F~ii~e~-~i~~~Y~~d~~sm~~~~Y~~~f~va~K~~~~ 387 (394)
-..|.... ..+. .......++.++++++++++| |+++... .....|.. .+..+.++.++++..
T Consensus 139 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~--------~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 139 ASYKSGEGEGRDK---LARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQ--------ELAQFLHVSVRKPEL 204 (211)
T ss_dssp EEEECCSSCEECT---TSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTS--------CEEEEEEEEEECCCC
T ss_pred EEEcCCCcccccc---cchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCC--------CCceEEEEEEecCcc
Confidence 53221110 0000 111123579999999999999 9999855 33334433 223444555555443
No 12
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.73 E-value=1.2e-16 Score=148.08 Aligned_cols=180 Identities=13% Similarity=0.174 Sum_probs=121.6
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
...|.+.++.. ++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-.+.
T Consensus 33 ~~~l~~~~~~~---~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------------------- 88 (253)
T 3g5l_A 33 WHELKKMLPDF---NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------------------- 88 (253)
T ss_dssp HHHHHTTCCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------------------
T ss_pred HHHHHHhhhcc---CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------------------
Confidence 34455665532 678999999999999999999999 99999999999976552110
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
..++.+..+|+.++. ...++||+|++...+...+++..+|++++++|||||++|-.
T Consensus 89 ---------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 89 ---------------------SPVVCYEQKAIEDIA---IEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ---------------------CTTEEEEECCGGGCC---CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCeEEEEcchhhCC---CCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 123788999988753 34689999999887776678899999999999999999853
Q ss_pred --cCcc-------hhhhhc-----------cCCC---------CCccccCCHHHHHHHHHhCCCEEEEEe--eccccCCC
Q 016155 316 --GPLL-------YHFADL-----------YGQE---------DEMSIELSLEDVKRVALHYGFEFEKEK--TIETTYTT 364 (394)
Q Consensus 316 --GPLl-------yh~~~~-----------~g~~---------~~~~ieLS~eEl~~ll~~~GF~ii~e~--~i~~~Y~~ 364 (394)
.|.. |.+... .... ....+..+.++++++++++||+++... ........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~~~~ 224 (253)
T 3g5l_A 145 VEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPELKD 224 (253)
T ss_dssp EECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCGGGSS
T ss_pred eCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCchhhcc
Confidence 2211 111100 0000 001123399999999999999999854 22222223
Q ss_pred CcccccccccceEEE--EEEEcC
Q 016155 365 NPRSMMQNRYFTAFW--TMRKKS 385 (394)
Q Consensus 365 d~~sm~~~~Y~~~f~--va~K~~ 385 (394)
...+....-.+.|. .++|..
T Consensus 225 -~~~~~~~~~~P~fl~~~~~~~~ 246 (253)
T 3g5l_A 225 -LPEMQDEYRRPMMLLISATKQE 246 (253)
T ss_dssp -CGGGGGGGTSCCEEEEEEEECC
T ss_pred -ChhHHHhhcCceEEEEEEeccc
Confidence 33344444455555 455543
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=1.3e-16 Score=142.96 Aligned_cols=138 Identities=12% Similarity=0.144 Sum_probs=103.3
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCC
Q 016155 172 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 251 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p 251 (394)
+.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-. .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------------------------------~----- 83 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT---------------------------------H----- 83 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH---------------------------------C-----
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---------------------------------C-----
Confidence 56899999999999999999999999999999999655411 0
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 252 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 252 ~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
.++.++.+|+.++. ...++||+|++...+... .++..+++.++++|||||+++-..+..-.... ....
T Consensus 84 ------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~ 153 (203)
T 3h2b_A 84 ------PSVTFHHGTITDLS---DSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP-MYHP 153 (203)
T ss_dssp ------TTSEEECCCGGGGG---GSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE-ECCS
T ss_pred ------CCCeEEeCcccccc---cCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh-hhch
Confidence 12578889988763 235899999998766554 37899999999999999999853221111000 1111
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
......++.++++++++++||+++....
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 1123457999999999999999998663
No 14
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.73 E-value=2.9e-17 Score=154.70 Aligned_cols=148 Identities=16% Similarity=0.117 Sum_probs=105.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..|++.|. .|+|+|+|..|+..++..+...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 110 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--------------------------------- 110 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS---------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 567999999999999999999998 8999999999997666322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc----CChhhHHHHHHHHHHhccCCcEEEEecCcc------
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRILKDGGVWINLGPLL------ 319 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFl----Dta~ni~~yl~~I~~~LKpGG~wIN~GPLl------ 319 (394)
....++.++.+|+.++.. ...++||+|++.+.+ .+..++..+|+.++++|||||++|-..|..
T Consensus 111 -----~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 183 (298)
T 1ri5_A 111 -----KRRFKVFFRAQDSYGRHM--DLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILER 183 (298)
T ss_dssp -----CCSSEEEEEESCTTTSCC--CCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred -----CCCccEEEEECCcccccc--CCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 011247889999887522 135789999988655 557788999999999999999999533321
Q ss_pred ----------hh------------------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 320 ----------YH------------------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 320 ----------yh------------------~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
|. |.-...........++.++++++++++||++++....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 184 YKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred HccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 11 0000000000012468999999999999999986644
No 15
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.72 E-value=6.7e-17 Score=148.50 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=105.4
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCC
Q 016155 172 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 251 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p 251 (394)
+.+|||+|||+|+++..|++.|+.|+|+|+|..|+..++-.+...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------------- 111 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSS----------------------------------- 111 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTS-----------------------------------
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhcc-----------------------------------
Confidence 459999999999999999999999999999999997665322100
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 252 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 252 ~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
....++.+..+|+.++.. .++||+|++...+...+ +...+++.++++|||||++|-.... .....++
T Consensus 112 ---~~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~~~~~- 180 (235)
T 3lcc_A 112 ---PKAEYFSFVKEDVFTWRP----TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP---ITDHVGG- 180 (235)
T ss_dssp ---GGGGGEEEECCCTTTCCC----SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC---CSCCCSC-
T ss_pred ---CCCcceEEEECchhcCCC----CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec---ccccCCC-
Confidence 011348899999988542 46899999887666444 7889999999999999999853221 1111111
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
..+.++.+++.+++++.||++++.+..
T Consensus 181 --~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 181 --PPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp --SSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred --CCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 135689999999999999999986643
No 16
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.72 E-value=2.1e-16 Score=144.24 Aligned_cols=164 Identities=13% Similarity=0.107 Sum_probs=111.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+...
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~---------------------------------- 82 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ---------------------------------- 82 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc----------------------------------
Confidence 5679999999999999999999999999999999997665322100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-cc---CChhhHHHHHHHHHHhccCCcEEEEecCc--------
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FI---DTAHNIVEYIEIISRILKDGGVWINLGPL-------- 318 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-Fl---Dta~ni~~yl~~I~~~LKpGG~wIN~GPL-------- 318 (394)
+.++.+..+|+.++.. . ++||+|++.. .+ .+.+++..+++.++++|||||++|---|.
T Consensus 83 ------~~~~~~~~~d~~~~~~---~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~ 152 (246)
T 1y8c_A 83 ------GLKPRLACQDISNLNI---N-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVL 152 (246)
T ss_dssp ------TCCCEEECCCGGGCCC---S-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTT
T ss_pred ------CCCeEEEecccccCCc---c-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhc
Confidence 0136788899887532 2 7899999876 44 34478899999999999999999842111
Q ss_pred --------------chhhhhc-------------cCCC------CCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCC
Q 016155 319 --------------LYHFADL-------------YGQE------DEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTN 365 (394)
Q Consensus 319 --------------lyh~~~~-------------~g~~------~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d 365 (394)
.|..... .++. ......++.++++++++++||++++.... |..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~---~~~~ 229 (246)
T 1y8c_A 153 GNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDC---YSNK 229 (246)
T ss_dssp TTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEES---SSSC
T ss_pred CcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc---cccC
Confidence 0100000 0000 00012469999999999999999886532 2221
Q ss_pred cccccccccceEEEEEEEc
Q 016155 366 PRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 366 ~~sm~~~~Y~~~f~va~K~ 384 (394)
+. ...-...++||||+
T Consensus 230 ~~---~~~~~~~~~varK~ 245 (246)
T 1y8c_A 230 KV---EKFTERITYLVKLG 245 (246)
T ss_dssp BC---CTTCSEEEEEEEEC
T ss_pred cC---CCCceeEEEEEEec
Confidence 11 11124568899996
No 17
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.71 E-value=2.9e-16 Score=142.02 Aligned_cols=140 Identities=11% Similarity=-0.026 Sum_probs=106.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G---f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..|++++ ..|+|+|+|..|+..++..+... .
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~-- 86 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----------------------------G-- 86 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------------------T--
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----------------------------C--
Confidence 56799999999999999999997 89999999999997766332110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
..++.+..+|+.++. ...++||+|++...+...++...++++++++|||||+++-..+...... .
T Consensus 87 ---------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~--~- 151 (219)
T 3dh0_A 87 ---------LKNVEVLKSEENKIP---LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERD--K- 151 (219)
T ss_dssp ---------CTTEEEEECBTTBCS---SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCS--S-
T ss_pred ---------CCcEEEEecccccCC---CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccc--c-
Confidence 013788999988753 2457899999988777777888999999999999999996432211110 0
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+.....++.+++.++++++||++++..
T Consensus 152 -~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 152 -GPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp -SCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred -CCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 1112346799999999999999998865
No 18
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.71 E-value=1.4e-16 Score=141.23 Aligned_cols=138 Identities=16% Similarity=0.126 Sum_probs=100.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+... .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------- 78 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE--------------------------N------- 78 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC--------------------------C-------
Confidence 4569999999999999999999999999999999997665322110 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 328 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~ 328 (394)
..++.+..+|+.++. . .++||+|++...+.. .+++..+++.++++|||||+++-+.+..-. ....
T Consensus 79 ------~~~~~~~~~d~~~~~---~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~---~~~~ 145 (199)
T 2xvm_A 79 ------LDNLHTRVVDLNNLT---F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTA---DYPC 145 (199)
T ss_dssp ------CTTEEEEECCGGGCC---C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS---SSCC
T ss_pred ------CCCcEEEEcchhhCC---C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccC---CcCC
Confidence 013678899988752 2 578999998865443 347889999999999999998753322110 0011
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 329 EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 329 ~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+.....++.+|++++++. |++++.+
T Consensus 146 ~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 146 TVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp CSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred CCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 1112456799999999976 9998854
No 19
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.70 E-value=6e-16 Score=138.46 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=102.2
Q ss_pred eEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCC
Q 016155 174 ACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAS 253 (394)
Q Consensus 174 ~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~ 253 (394)
+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------------- 74 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEK------------------------------------- 74 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHH-------------------------------------
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------------
Confidence 9999999999999999999999999999999997665322110
Q ss_pred CCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcc
Q 016155 254 AGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMS 333 (394)
Q Consensus 254 ~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ 333 (394)
+.++.+..+|+.++. ...++||+|++.+......+...+++.+.++|||||++|-..+.........+.+....
T Consensus 75 ---~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 148 (202)
T 2kw5_A 75 ---GVKITTVQSNLADFD---IVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLD 148 (202)
T ss_dssp ---TCCEEEECCBTTTBS---CCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGG
T ss_pred ---CCceEEEEcChhhcC---CCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcce
Confidence 012678888987753 23578999998765445677889999999999999999864332111110112122234
Q ss_pred ccCCHHHHHHHHHhCCCEEEEEe
Q 016155 334 IELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 334 ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..++.++|+++++ ||+++...
T Consensus 149 ~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 149 LLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp GCCCHHHHHHHCS--SSCEEEEE
T ss_pred eecCHHHHHHHhc--CceEEEEE
Confidence 5789999999997 99999855
No 20
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.70 E-value=7.8e-16 Score=139.25 Aligned_cols=151 Identities=21% Similarity=0.228 Sum_probs=107.9
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.|..+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+.
T Consensus 33 ~~~~~l~~~~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------- 88 (220)
T 3hnr_A 33 HYEDILEDVVNK-------SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----------------- 88 (220)
T ss_dssp THHHHHHHHHHT-------CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----------------
T ss_pred HHHHHHHHhhcc-------CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----------------
Confidence 344566666532 46799999999999999999999999999999999965542110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHH--HHHHHHHhccCC
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE--YIEIISRILKDG 309 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~--yl~~I~~~LKpG 309 (394)
.++.++.+|+.++.. . ++||+|++...+...++... +|++++++||||
T Consensus 89 --------------------------~~~~~~~~d~~~~~~---~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 89 --------------------------KEFSITEGDFLSFEV---P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp --------------------------TTCCEESCCSSSCCC---C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred --------------------------CceEEEeCChhhcCC---C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC
Confidence 126788899888632 3 89999999877666555544 999999999999
Q ss_pred cEEEEecCcchhhhh---------ccCC-----CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 310 GVWINLGPLLYHFAD---------LYGQ-----EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 310 G~wIN~GPLlyh~~~---------~~g~-----~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|+++-..|..-.... ..+- ........+.++++++++++||+++...
T Consensus 139 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 139 GKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp CEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 999965433111000 0000 0001234589999999999999988766
No 21
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.70 E-value=2.6e-16 Score=145.22 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=107.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+.+.+...++.. .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-
T Consensus 28 ~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~------------------------ 81 (240)
T 3dli_A 28 VKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEG------------------------ 81 (240)
T ss_dssp HHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHT------------------------
T ss_pred HHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHh------------------------
Confidence 555555554432 156799999999999999999999999999999999864430
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~wI 313 (394)
++.++.+|+.++.. +...++||+|++...+.... ++..++++++++|||||++|
T Consensus 82 -----------------------~~~~~~~d~~~~~~-~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 82 -----------------------KFNVVKSDAIEYLK-SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp -----------------------TSEEECSCHHHHHH-TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEE
T ss_pred -----------------------hcceeeccHHHHhh-hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEE
Confidence 03456677766421 23468999999987665444 67999999999999999998
Q ss_pred EecCcch---hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 314 NLGPLLY---HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 314 N~GPLly---h~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-..|... .+.+.+ ..+.....++.+++.++++++||+++...
T Consensus 138 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 138 IESPNPTSLYSLINFY-IDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp EEEECTTSHHHHHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEeCCcchhHHHHHHh-cCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 6433211 111111 11222346799999999999999998865
No 22
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.70 E-value=6.7e-16 Score=141.20 Aligned_cols=177 Identities=16% Similarity=0.129 Sum_probs=119.9
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.|..+.+.+.+.++ ++.+|||+|||+|+++..|+++ ..|+|+|+|..|+..++-.+...
T Consensus 19 ~~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~--------------- 77 (243)
T 3d2l_A 19 PYPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMET--------------- 77 (243)
T ss_dssp CHHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred cHHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhc---------------
Confidence 46668888888775 3579999999999999999999 99999999999997666322100
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec----ccCChhhHHHHHHHHHHhcc
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRILK 307 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f----FlDta~ni~~yl~~I~~~LK 307 (394)
+.++.+..+|+.++.. .++||+|++.+ ++.+..++..+++.++++||
T Consensus 78 -------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 78 -------------------------NRHVDFWVQDMRELEL----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLT 128 (243)
T ss_dssp -------------------------TCCCEEEECCGGGCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEE
T ss_pred -------------------------CCceEEEEcChhhcCC----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcC
Confidence 0126788899887532 37899999753 45556788899999999999
Q ss_pred CCcEEEEecCcc--------------------hhhhhccCC---------------CC---------CccccCCHHHHHH
Q 016155 308 DGGVWINLGPLL--------------------YHFADLYGQ---------------ED---------EMSIELSLEDVKR 343 (394)
Q Consensus 308 pGG~wIN~GPLl--------------------yh~~~~~g~---------------~~---------~~~ieLS~eEl~~ 343 (394)
|||++|-.-|.. +.|....+. .. .....++.+|+++
T Consensus 129 pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 208 (243)
T 3d2l_A 129 DGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYIT 208 (243)
T ss_dssp EEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHH
T ss_pred CCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHH
Confidence 999998411100 000000000 00 0012479999999
Q ss_pred HHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 016155 344 VALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 344 ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~K~ 384 (394)
+++++||++++.... |...+. ...-...++||||+
T Consensus 209 ~l~~aGf~~~~~~~~---~~~~~~---~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 209 WLREAGFRVCAVTGD---FKSDAP---TETAERIFFVAEKI 243 (243)
T ss_dssp HHHHTTEEEEEEEET---TSSSCC---CTTCSEEEEEEEEC
T ss_pred HHHHCCCeEEEEecC---cccCCC---CCCceEEEEEEEeC
Confidence 999999999886421 222111 11124568899985
No 23
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.69 E-value=1.3e-16 Score=151.76 Aligned_cols=211 Identities=16% Similarity=0.104 Sum_probs=121.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHH-cCCeEEEEeCCHHHHHHHhhhhhccccccccc-cccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWN-IYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~-i~Pfi~~~sn 233 (394)
++..|.+.++.. ..++.+|||+|||+|+++..++. .|..|+|+|+|..|+..++-.++.......+. ..+++.....
T Consensus 57 ~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 57 KLRCLAQTFATG-EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHHTS-CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC-CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 344455544321 12567999999999997665555 37899999999999976653222100000000 0000000000
Q ss_pred ----CCCcccCccccccCCCCCCCCCCCCceeEEeccccc-ccCC--CCCCCCccEEEEecccCC----hhhHHHHHHHH
Q 016155 234 ----SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE-VYSD--PSQVGAWDAVVTCFFIDT----AHNIVEYIEII 302 (394)
Q Consensus 234 ----~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~e-ly~~--~~~~~~fD~VvT~fFlDt----a~ni~~yl~~I 302 (394)
......+++ .....++.+|+.+ +... ....++||+|++.+.+.. .+++..+|+++
T Consensus 136 ~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~ 201 (289)
T 2g72_A 136 KGECWQDKERQLR--------------ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHI 201 (289)
T ss_dssp SCCCHHHHHHHHH--------------HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHH
T ss_pred cccchhhhHHHHH--------------hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHH
Confidence 000000000 0014567778776 2110 123467999999986654 66889999999
Q ss_pred HHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec--cccCCCCcccccccccceEEEE
Q 016155 303 SRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPRSMMQNRYFTAFWT 380 (394)
Q Consensus 303 ~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i--~~~Y~~d~~sm~~~~Y~~~f~v 380 (394)
+++|||||++|-.+.+.-.+... +........++.+++.++++++||+++..... ...|.... ..|...|||
T Consensus 202 ~r~LkpGG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 275 (289)
T 2g72_A 202 TTLLRPGGHLLLIGALEESWYLA-GEARLTVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQTGV-----DDVKGVFFA 275 (289)
T ss_dssp HTTEEEEEEEEEEEEESCCEEEE-TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCCTT-----BCCCEEEEE
T ss_pred HHhcCCCCEEEEEEecCcceEEc-CCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeeccccccccc-----cCcceEEEE
Confidence 99999999999654321111110 11110123579999999999999999885532 24454322 567788998
Q ss_pred EEEcCcc
Q 016155 381 MRKKSVT 387 (394)
Q Consensus 381 a~K~~~~ 387 (394)
++|+...
T Consensus 276 ~~~~~~~ 282 (289)
T 2g72_A 276 WAQKVGL 282 (289)
T ss_dssp EEEECC-
T ss_pred EEecccc
Confidence 8887543
No 24
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.69 E-value=3.8e-16 Score=142.86 Aligned_cols=150 Identities=13% Similarity=0.209 Sum_probs=106.7
Q ss_pred HHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCc
Q 016155 159 ELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSD 237 (394)
Q Consensus 159 ~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~ 237 (394)
.|.+.++.. ++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-...
T Consensus 34 ~l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----------------------- 87 (243)
T 3bkw_A 34 ALRAMLPEV---GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP----------------------- 87 (243)
T ss_dssp HHHHHSCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC-----------------------
T ss_pred HHHHhcccc---CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc-----------------------
Confidence 344455432 567999999999999999999999 99999999999976551110
Q ss_pred ccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec-
Q 016155 238 SDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG- 316 (394)
Q Consensus 238 ~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G- 316 (394)
..++.+..+|+.++. ...++||+|++...+...++...++++++++|||||++|-..
T Consensus 88 -------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 88 -------------------DTGITYERADLDKLH---LPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -------------------SSSEEEEECCGGGCC---CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------cCCceEEEcChhhcc---CCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 013678889988753 235789999988777666778899999999999999998532
Q ss_pred -Ccc-------hhhhhc------cCC--C-----------CCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 317 -PLL-------YHFADL------YGQ--E-----------DEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 317 -PLl-------yh~~~~------~g~--~-----------~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|.. |.+... ... . .......+.+++.++++++||++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 212 (243)
T 3bkw_A 146 HPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVE 212 (243)
T ss_dssp CHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEE
T ss_pred CcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeec
Confidence 110 110000 000 0 001123589999999999999998854
No 25
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.68 E-value=8.1e-16 Score=138.14 Aligned_cols=139 Identities=14% Similarity=0.092 Sum_probs=100.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++. . .
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-------~-----------------------~------- 88 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR-------H-----------------------G------- 88 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG-------G-----------------------C-------
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh-------c-----------------------C-------
Confidence 45699999999999999999999999999999999965541 0 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcc---h--h-h
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLL---Y--H-F 322 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~wIN~GPLl---y--h-~ 322 (394)
..++.++.+|+.++. ..++||+|++...+...++ +..+++.++++|||||+++-..+.. + . +
T Consensus 89 ------~~~~~~~~~d~~~~~----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 158 (218)
T 3ou2_A 89 ------LDNVEFRQQDLFDWT----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQD 158 (218)
T ss_dssp ------CTTEEEEECCTTSCC----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------
T ss_pred ------CCCeEEEecccccCC----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhh
Confidence 023788999998873 2589999998876665554 5899999999999999998532210 0 0 0
Q ss_pred hhc----c-C-CCCCc-----cccCCHHHHHHHHHhCCCEEEEEe
Q 016155 323 ADL----Y-G-QEDEM-----SIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 323 ~~~----~-g-~~~~~-----~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
... . . ..... .-.++.+++.++++++||+++..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 159 DSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp -----CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 000 0 0 00000 113699999999999999976654
No 26
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.68 E-value=1e-15 Score=141.55 Aligned_cols=100 Identities=21% Similarity=0.298 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------------------------- 86 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKER---------------------------------- 86 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 5679999999999999999999999999999999997666322100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
+.++.++.+|+.++.. .++||+|++.+ ..-..+++..+++.++++|||||++|-
T Consensus 87 ------~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 87 ------NLKIEFLQGDVLEIAF----KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp ------TCCCEEEESCGGGCCC----CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCceEEEECChhhccc----CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0126789999988632 36899998653 223456788999999999999999983
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=3.4e-16 Score=140.14 Aligned_cols=159 Identities=18% Similarity=0.156 Sum_probs=111.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
|..+.+.+.+.++.. ++ +|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 29 ~~~~~~~~~~~~~~~---~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------------- 89 (219)
T 3dlc_A 29 YPIIAENIINRFGIT---AG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA--------------- 89 (219)
T ss_dssp HHHHHHHHHHHHCCC---EE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred cHHHHHHHHHhcCCC---CC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc---------------
Confidence 445666666666532 33 9999999999999999998 789999999999997766332110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
....++.+..+|+.++. ...++||+|++...+...++...++++++++|||||+
T Consensus 90 -----------------------~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 143 (219)
T 3dlc_A 90 -----------------------NLNDRIQIVQGDVHNIP---IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGK 143 (219)
T ss_dssp -----------------------TCTTTEEEEECBTTBCS---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred -----------------------cccCceEEEEcCHHHCC---CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCE
Confidence 01124788999998753 3468999999987666667888999999999999999
Q ss_pred EEEecCcchh---------hhhccCCC-C---CccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 312 WINLGPLLYH---------FADLYGQE-D---EMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 312 wIN~GPLlyh---------~~~~~g~~-~---~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
++-..+..-. +....... . ...-.++.+++.++++++||++++..
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 144 TYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred EEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 9854322100 00000000 0 00113478999999999999987654
No 28
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.67 E-value=1.8e-15 Score=137.97 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=84.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+.+.|.+..+ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+
T Consensus 29 ~~~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~--------------------- 82 (239)
T 3bxo_A 29 DIADLVRSRTP-----EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL--------------------- 82 (239)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHHhcC-----CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---------------------
Confidence 35666666553 5679999999999999999999999999999999996554110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec----ccCChhhHHHHHHHHHHhccCCc
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f----FlDta~ni~~yl~~I~~~LKpGG 310 (394)
.++.+..+|+.++. . .++||+|++.+ ++...+++..+++.++++|||||
T Consensus 83 -----------------------~~~~~~~~d~~~~~---~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 135 (239)
T 3bxo_A 83 -----------------------PDATLHQGDMRDFR---L-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGG 135 (239)
T ss_dssp -----------------------TTCEEEECCTTTCC---C-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECCHHHcc---c-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 02567888987753 2 47899999543 35556788999999999999999
Q ss_pred EEEE
Q 016155 311 VWIN 314 (394)
Q Consensus 311 ~wIN 314 (394)
++|-
T Consensus 136 ~l~~ 139 (239)
T 3bxo_A 136 VVVV 139 (239)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 29
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=3.9e-15 Score=136.13 Aligned_cols=156 Identities=15% Similarity=0.140 Sum_probs=108.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
..+...+.+.++.. .++.+|||+|||+|+++..|+++ |..|+|+|+|..|+..++..+..
T Consensus 29 ~~~~~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------- 90 (234)
T 3dtn_A 29 DDFYGVSVSIASVD--TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG---------------- 90 (234)
T ss_dssp HHHHHHHHHTCCCS--CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS----------------
T ss_pred HHHHHHHHHHhhcC--CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc----------------
Confidence 34455566655522 26689999999999999999999 88999999999999765521100
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCC
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDG 309 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpG 309 (394)
..++.++.+|+.++.. .++||+|++...+....+ ...++++++++||||
T Consensus 91 -------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 141 (234)
T 3dtn_A 91 -------------------------NLKVKYIEADYSKYDF----EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKES 141 (234)
T ss_dssp -------------------------CTTEEEEESCTTTCCC----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred -------------------------CCCEEEEeCchhccCC----CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCCC
Confidence 0147889999988642 289999998875554443 346999999999999
Q ss_pred cEEEEecCcc-------------hh-hhhccCC----------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 310 GVWINLGPLL-------------YH-FADLYGQ----------EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 310 G~wIN~GPLl-------------yh-~~~~~g~----------~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|++|...+.. |. +....+. .......++.+++.++++++||+.++..
T Consensus 142 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 142 GIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp EEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeee
Confidence 9999543211 10 0000010 0012335799999999999999999754
No 30
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=2.3e-15 Score=136.35 Aligned_cols=149 Identities=14% Similarity=0.160 Sum_probs=104.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+... . +++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~--~~~-- 79 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSP--------------------------G--LNQ-- 79 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCC--------------------------S--CCS--
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc--------------------------C--Ccc--
Confidence 5679999999999999999999999999999999997766332110 0 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh---hHHHHHHHHHHhccCCcEEEEecCcc------hh
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH---NIVEYIEIISRILKDGGVWINLGPLL------YH 321 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~---ni~~yl~~I~~~LKpGG~wIN~GPLl------yh 321 (394)
....++.+..+|+.++. ...++||+|++...+.... ....+++.++++|||||++|-..+.. +.
T Consensus 80 ----~~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 152 (235)
T 3sm3_A 80 ----KTGGKAEFKVENASSLS---FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYR 152 (235)
T ss_dssp ----SSSCEEEEEECCTTSCC---SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHH
T ss_pred ----ccCcceEEEEecccccC---CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHH
Confidence 01235889999988753 3468999999886555443 34489999999999999998542210 00
Q ss_pred ------hhh--ccC----------CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 ------FAD--LYG----------QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 ------~~~--~~g----------~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+.. ..+ ..+.....++.++++++++++||+++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 153 KRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred HHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 000 000 00011236799999999999999999855
No 31
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.66 E-value=6.4e-16 Score=142.71 Aligned_cols=142 Identities=13% Similarity=0.192 Sum_probs=103.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..|++++. .|+|+|+|..|+..++..+...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------------- 125 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--------------------------------- 125 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG---------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc---------------------------------
Confidence 467999999999999999999976 8999999999997665322100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
...++.++.+|+.++.. ..++||+|++...+...++ +..+|+.++++|||||++|-..|.... ...+.
T Consensus 126 ------~~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~~ 195 (241)
T 2ex4_A 126 ------GKRVRNYFCCGLQDFTP---EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-GVILD 195 (241)
T ss_dssp ------GGGEEEEEECCGGGCCC---CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-SEEEE
T ss_pred ------CCceEEEEEcChhhcCC---CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-cceec
Confidence 01236788999877532 3568999998876655444 668999999999999999964433221 00000
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.....+..+.++++++++++||++++..
T Consensus 196 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 196 -DVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp -TTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 0112345599999999999999999865
No 32
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.66 E-value=7.6e-16 Score=143.53 Aligned_cols=142 Identities=14% Similarity=0.111 Sum_probs=104.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|++++..|+|+|+|..|+..++..+... .
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~------- 83 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGN--------------------------G------- 83 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc--------------------------C-------
Confidence 5679999999999999999999999999999999997665322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec---Ccc---hhhhh
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG---PLL---YHFAD 324 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G---PLl---yh~~~ 324 (394)
..++.++.+|+.++. +.+++||+|++.+.+...++....|++++++|||||+++-.. |-. -.+..
T Consensus 84 ------~~~v~~~~~d~~~l~---~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 84 ------HQQVEYVQGDAEQMP---FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp ------CCSEEEEECCC-CCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred ------CCceEEEEecHHhCC---CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 013788999988753 346899999998877666788899999999999999998532 211 00000
Q ss_pred ---ccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 325 ---LYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 325 ---~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
... .+.....++.+++.++++++||+++..
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~ 187 (260)
T 1vl5_A 155 YVEKER-DYSHHRAWKKSDWLKMLEEAGFELEEL 187 (260)
T ss_dssp HHHHHH-CTTCCCCCBHHHHHHHHHHHTCEEEEE
T ss_pred HHHHhc-CccccCCCCHHHHHHHHHHCCCeEEEE
Confidence 000 111123579999999999999998874
No 33
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=9.9e-16 Score=141.66 Aligned_cols=158 Identities=16% Similarity=0.145 Sum_probs=112.4
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 230 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~ 230 (394)
.+...++.|.+.++.. ++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.....
T Consensus 20 ~~~~~~~~l~~~~~~~---~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~-------------- 82 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMK---PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEEL-------------- 82 (256)
T ss_dssp CCHHHHHHHHHHTCCC---TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred CCHHHHHHHHHhcCCC---CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhc--------------
Confidence 3445666666666432 5679999999999999999987 889999999999997665322100
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 016155 231 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 231 ~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG 310 (394)
....++.+..+|+.++. . .++||+|++...+...+++..+|++++++|||||
T Consensus 83 ------------------------~~~~~v~~~~~d~~~~~---~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG 134 (256)
T 1nkv_A 83 ------------------------GVSERVHFIHNDAAGYV---A-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGG 134 (256)
T ss_dssp ------------------------TCTTTEEEEESCCTTCC---C-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEE
T ss_pred ------------------------CCCcceEEEECChHhCC---c-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCe
Confidence 01124788999998753 2 5789999987666555577899999999999999
Q ss_pred EEEEecCcchh------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 311 VWINLGPLLYH------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 311 ~wIN~GPLlyh------~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
+++-..|.... +..... .......++.+++.++++++||++++.
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 135 IMLIGEPYWRQLPATEEIAQACG-VSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEEEEEEEETTCCSSHHHHHTTT-CSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EEEEecCcccCCCChHHHHHHHh-cccccccCCHHHHHHHHHHCCCeeEEE
Confidence 99864432110 110000 011123579999999999999998764
No 34
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.66 E-value=1.5e-15 Score=140.13 Aligned_cols=141 Identities=16% Similarity=0.054 Sum_probs=103.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~-v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..|+++|+. |+|+|+|..|+..++-.+..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 138 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG---------------------------------- 138 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT----------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc----------------------------------
Confidence 5779999999999999999999764 99999999999765522100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
..++.+..+|+.++. ...++||+|++...+... .++..+|+.++++|||||++|-..+..-.......
T Consensus 139 -------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 208 (254)
T 1xtp_A 139 -------MPVGKFILASMETAT---LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD 208 (254)
T ss_dssp -------SSEEEEEESCGGGCC---CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE
T ss_pred -------CCceEEEEccHHHCC---CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec
Confidence 023778899988753 235799999988766555 56889999999999999999964432110000000
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
........+.++++++++++||++++..
T Consensus 209 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 209 -KEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp -TTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 1112446799999999999999998865
No 35
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.65 E-value=2.1e-15 Score=139.47 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=105.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-....
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 100 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG---------------------------------- 100 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc----------------------------------
Confidence 6779999999999999999998 99999999999999765521100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchh------
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH------ 321 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN~GPLlyh------ 321 (394)
..++.+..+|+.++. ...++||+|++...+... .+...++++++++|||||+++-..|....
T Consensus 101 -------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (266)
T 3ujc_A 101 -------NNKIIFEANDILTKE---FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD 170 (266)
T ss_dssp -------CTTEEEEECCTTTCC---CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH
T ss_pred -------CCCeEEEECccccCC---CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH
Confidence 023788999988752 346899999998776666 88999999999999999999964321110
Q ss_pred -hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 322 -FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 322 -~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
+.... .+.....++.+++.++++++||++++...
T Consensus 171 ~~~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 171 EFKEYV--KQRKYTLITVEEYADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHH--HHHTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHH--hcCCCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 11000 00012256999999999999999988653
No 36
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.65 E-value=2.5e-15 Score=140.47 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=112.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+++.|.+.++.. ++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 49 ~~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 107 (273)
T 3bus_A 49 LTDEMIALLDVR---SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA------------------ 107 (273)
T ss_dssp HHHHHHHHSCCC---TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCCC---CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc------------------
Confidence 445555555432 5679999999999999999985 899999999999997665322110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.+..+|+.++. ...++||+|++...+...++...+|++++++|||||+++-
T Consensus 108 --------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 108 --------------------GLANRVTFSYADAMDLP---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp --------------------TCTTTEEEEECCTTSCC---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred --------------------CCCcceEEEECccccCC---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 01124788999988753 3468999999988777777889999999999999999985
Q ss_pred ecCc----chhhh----hccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 315 LGPL----LYHFA----DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 315 ~GPL----lyh~~----~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
..+. ..... +...........++.+++.++++++||+++....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 215 (273)
T 3bus_A 165 ADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTVD 215 (273)
T ss_dssp EEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEEE
Confidence 3221 11100 0000000012357999999999999999988553
No 37
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.65 E-value=3.2e-15 Score=136.34 Aligned_cols=174 Identities=19% Similarity=0.104 Sum_probs=117.2
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.|...++.|....| +.+|||+|||+|+++..|+++ +|+|+|..|+..++-.
T Consensus 34 ~~~~~~~~l~~~~~------~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------------- 84 (219)
T 1vlm_A 34 AYLSELQAVKCLLP------EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------------- 84 (219)
T ss_dssp HHHHHHHHHHHHCC------SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHhCC------CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-------------------
Confidence 35556777777764 458999999999999999987 9999999998654410
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
++.++.+|+.++. ...++||+|++...+...++...+++.+.++|||||+
T Consensus 85 ---------------------------~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 134 (219)
T 1vlm_A 85 ---------------------------GVFVLKGTAENLP---LKDESFDFALMVTTICFVDDPERALKEAYRILKKGGY 134 (219)
T ss_dssp ---------------------------TCEEEECBTTBCC---SCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEE
T ss_pred ---------------------------CCEEEEcccccCC---CCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcE
Confidence 1466778877653 3457899999887776667788999999999999999
Q ss_pred EEEecCcchh-----hhhc-cCCC-CCccccCCHHHHHHHHHhCCCEEEEEe--eccccCCCCccccccccc---ceEEE
Q 016155 312 WINLGPLLYH-----FADL-YGQE-DEMSIELSLEDVKRVALHYGFEFEKEK--TIETTYTTNPRSMMQNRY---FTAFW 379 (394)
Q Consensus 312 wIN~GPLlyh-----~~~~-~g~~-~~~~ieLS~eEl~~ll~~~GF~ii~e~--~i~~~Y~~d~~sm~~~~Y---~~~f~ 379 (394)
+|-..|.... +... .+.. ......++.+++.++++++||++++.. ....+|..+........+ ...++
T Consensus 135 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i 214 (219)
T 1vlm_A 135 LIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFKHPSELSEIEPVKEGYGEGAFVVI 214 (219)
T ss_dssp EEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECCSCGGGCSSCCCCEESSSSSSEEEE
T ss_pred EEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccCCCCCccccchhhhcCCCCCeEEEE
Confidence 9864332111 1100 0100 011234799999999999999998854 223344333322121222 34566
Q ss_pred EEEEc
Q 016155 380 TMRKK 384 (394)
Q Consensus 380 va~K~ 384 (394)
+|+|+
T Consensus 215 ~a~K~ 219 (219)
T 1vlm_A 215 RGTKK 219 (219)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 88875
No 38
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.64 E-value=6.3e-15 Score=140.89 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=105.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.+...
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 118 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV--------------------------------- 118 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS---------------------------------
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 5679999999999999999999 999999999999997666332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh---------hhHHHHHHHHHHhccCCcEEEEecCcch
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA---------HNIVEYIEIISRILKDGGVWINLGPLLY 320 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta---------~ni~~yl~~I~~~LKpGG~wIN~GPLly 320 (394)
....++.+..+|+.++ .++||+|++...+... .+...+++++.++|||||+++-..+...
T Consensus 119 -----~~~~~v~~~~~d~~~~------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 119 -----DSPRRKEVRIQGWEEF------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp -----CCSSCEEEEECCGGGC------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred -----CCCCceEEEECCHHHc------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 1123478999999875 3789999988654433 5678999999999999999985322111
Q ss_pred hhh--hccC-----------------CCCCccccCCHHHHHHHHHhCCCEEEEEeeccccC
Q 016155 321 HFA--DLYG-----------------QEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTY 362 (394)
Q Consensus 321 h~~--~~~g-----------------~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y 362 (394)
... ...+ .-+ .....+.+++.++++++||+++........|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 247 (302)
T 3hem_A 188 DKEEAQELGLTSPMSLLRFIKFILTEIFP-GGRLPRISQVDYYSSNAGWKVERYHRIGANY 247 (302)
T ss_dssp CHHHHHHHTCCCCHHHHHHHHHHHHHTCT-TCCCCCHHHHHHHHHHHTCEEEEEEECGGGH
T ss_pred CccchhhccccccccccchHHHHHHhcCC-CCCCCCHHHHHHHHHhCCcEEEEEEeCchhH
Confidence 000 0000 001 1235689999999999999999876544444
No 39
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=1.3e-15 Score=140.88 Aligned_cols=136 Identities=11% Similarity=-0.011 Sum_probs=100.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++...
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------------------------------- 77 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------------------------------- 77 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------------------------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------------------------------
Confidence 5679999999999999999999 899999999999996554110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchh-------
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYH------- 321 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh------- 321 (394)
.++.+..+|+.++. ..++||+|++...+...++...+|+.++++|||||+++-..|-.+.
T Consensus 78 ---------~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 144 (259)
T 2p35_A 78 ---------PNTNFGKADLATWK----PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAM 144 (259)
T ss_dssp ---------TTSEEEECCTTTCC----CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHH
T ss_pred ---------CCcEEEECChhhcC----ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHH
Confidence 12577889987753 2578999999887776678889999999999999999864331111
Q ss_pred --------hhhccCC-CCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 322 --------FADLYGQ-EDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 322 --------~~~~~g~-~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
|...... .+.....++.+++.++++++||++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 186 (259)
T 2p35_A 145 HETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDV 186 (259)
T ss_dssp HHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEE
T ss_pred HHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEE
Confidence 1110000 01112357999999999999998654
No 40
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=1e-14 Score=127.83 Aligned_cols=125 Identities=18% Similarity=0.129 Sum_probs=97.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|++.|..|+|+|+|..|+..++..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------------------------------------- 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------------------------------------- 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-------------------------------------
Confidence 5679999999999999999999999999999999986554111
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~-fFlD--ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
.++.+..+|+.++. ...++||+|++. .++. ..++...+++.+.++|||||++|-..|.
T Consensus 89 -------~~~~~~~~d~~~~~---~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~--------- 149 (195)
T 3cgg_A 89 -------PEARWVVGDLSVDQ---ISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA--------- 149 (195)
T ss_dssp -------TTSEEEECCTTTSC---CCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET---------
T ss_pred -------CCCcEEEcccccCC---CCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC---------
Confidence 01567788887752 235789999986 2332 3466789999999999999999842110
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.-.++.+++.+++++.||++++..
T Consensus 150 -----~~~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 150 -----GRGWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp -----TSSCCHHHHHHHHHHHTEEEEEEE
T ss_pred -----CCCcCHHHHHHHHHHcCCEEeeee
Confidence 123689999999999999998865
No 41
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.64 E-value=2.1e-15 Score=135.94 Aligned_cols=153 Identities=18% Similarity=0.155 Sum_probs=108.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+...|.+.++ .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 21 ~~~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~---------------------- 74 (230)
T 3cc8_A 21 VNPNLLKHIK----KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL---------------------- 74 (230)
T ss_dssp CCHHHHTTCC----TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS----------------------
T ss_pred HHHHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------------------
Confidence 3445555554 25679999999999999999999999999999999986544100
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
..+..+|+.++. .+...++||+|++...+...++...+++.++++|||||+++-.
T Consensus 75 ------------------------~~~~~~d~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 75 ------------------------DHVVLGDIETMD-MPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ------------------------SEEEESCTTTCC-CCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred ------------------------CcEEEcchhhcC-CCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 134566766531 1234578999998877766677889999999999999999964
Q ss_pred cCcchhhh-------hcc-----CC-CCCccccCCHHHHHHHHHhCCCEEEEEeecc
Q 016155 316 GPLLYHFA-------DLY-----GQ-EDEMSIELSLEDVKRVALHYGFEFEKEKTIE 359 (394)
Q Consensus 316 GPLlyh~~-------~~~-----g~-~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~ 359 (394)
.|....+. ... +. .+.....++.+++.++++++||++++...+.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 186 (230)
T 3cc8_A 130 IPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVY 186 (230)
T ss_dssp EECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEecc
Confidence 44321110 000 00 0111234799999999999999999866433
No 42
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=1.2e-15 Score=144.01 Aligned_cols=138 Identities=17% Similarity=0.075 Sum_probs=101.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++-.+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------------------------- 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------------------------------------- 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-------------------------------------
Confidence 5679999999999999999999999999999999996554110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcch---hh----h
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLY---HF----A 323 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLly---h~----~ 323 (394)
.++.+..+|+.++. . .++||+|++.+.+....+...++++++++|||||+++-..|..- .+ .
T Consensus 100 -------~~~~~~~~d~~~~~---~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 168 (279)
T 3ccf_A 100 -------PHLHFDVADARNFR---V-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALY 168 (279)
T ss_dssp -------TTSCEEECCTTTCC---C-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHH
T ss_pred -------CCCEEEECChhhCC---c-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHH
Confidence 12567888987753 2 47899999988776666788999999999999999985322110 00 0
Q ss_pred ---hccCC----CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 324 ---DLYGQ----EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 324 ---~~~g~----~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
...+. .+.....++.+++.++++++||+++...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 169 NALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp HHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 00010 0011235699999999999999998744
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.63 E-value=4.9e-15 Score=141.46 Aligned_cols=116 Identities=17% Similarity=0.190 Sum_probs=83.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+.+..+.+.++. .+.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+...
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 127 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEA------------------ 127 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhc------------------
Confidence 344444444442 3449999999999999999999999999999999997665322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
.+. ...++.++.+|+.++.. .++||+|++.+ ..-+.+++..+|+.++++|||||+
T Consensus 128 --------~~~----------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 185 (299)
T 3g2m_A 128 --------PAD----------VRDRCTLVQGDMSAFAL----DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGK 185 (299)
T ss_dssp --------CHH----------HHTTEEEEECBTTBCCC----SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEE
T ss_pred --------ccc----------cccceEEEeCchhcCCc----CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcE
Confidence 000 00247899999988532 58899888553 222344678999999999999999
Q ss_pred EEE
Q 016155 312 WIN 314 (394)
Q Consensus 312 wIN 314 (394)
+|-
T Consensus 186 l~~ 188 (299)
T 3g2m_A 186 FLL 188 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 44
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=1.9e-15 Score=141.55 Aligned_cols=174 Identities=17% Similarity=0.096 Sum_probs=114.0
Q ss_pred cchHHHHHHHHHHhhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHH
Q 016155 125 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY 204 (394)
Q Consensus 125 ~d~~kv~~~L~q~~RDWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ 204 (394)
.+.......+...+..|... . .....+..+.+.|.+.++ ++.+|||+|||+|+++..|+++|+.|+|+|+|..
T Consensus 15 ~~~~~~~~~~a~~Yd~~~~~-~-~~~~~~~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~ 87 (260)
T 2avn_A 15 LRSWEFYDRIARAYDSMYET-P-KWKLYHRLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKE 87 (260)
T ss_dssp CCHHHHHHHHHHHHGGGGCS-H-HHHHHHHHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHH
T ss_pred hhhcchhhHHHHHHHHhccc-c-chhHHHHHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHH
Confidence 44555556666666666522 1 112234456677777765 4569999999999999999999999999999999
Q ss_pred HHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEE
Q 016155 205 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVV 284 (394)
Q Consensus 205 ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~Vv 284 (394)
|+..++-... . .+..+|+.++. ...++||+|+
T Consensus 88 ~l~~a~~~~~-------------------------------------------~--~~~~~d~~~~~---~~~~~fD~v~ 119 (260)
T 2avn_A 88 MLEVAREKGV-------------------------------------------K--NVVEAKAEDLP---FPSGAFEAVL 119 (260)
T ss_dssp HHHHHHHHTC-------------------------------------------S--CEEECCTTSCC---SCTTCEEEEE
T ss_pred HHHHHHhhcC-------------------------------------------C--CEEECcHHHCC---CCCCCEEEEE
Confidence 9965541100 0 14667776643 2367899999
Q ss_pred Eecc-cCChhhHHHHHHHHHHhccCCcEEEEecCcchh----------hhh-----ccC-----CCCC--ccccCCHHHH
Q 016155 285 TCFF-IDTAHNIVEYIEIISRILKDGGVWINLGPLLYH----------FAD-----LYG-----QEDE--MSIELSLEDV 341 (394)
Q Consensus 285 T~fF-lDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh----------~~~-----~~g-----~~~~--~~ieLS~eEl 341 (394)
+... +...+++..+|++++++|||||++|-..|..+. |.. ..+ ..+. ....++.+||
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (260)
T 2avn_A 120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDL 199 (260)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGG
T ss_pred EcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHH
Confidence 8653 222245789999999999999999853332210 000 000 0000 0014688999
Q ss_pred HHHHHhCCCEEEEEe
Q 016155 342 KRVALHYGFEFEKEK 356 (394)
Q Consensus 342 ~~ll~~~GF~ii~e~ 356 (394)
.++ +||++++..
T Consensus 200 ~~l---aGf~~~~~~ 211 (260)
T 2avn_A 200 DSL---EGFETVDIR 211 (260)
T ss_dssp SSC---TTEEEEEEE
T ss_pred HHh---cCceEEEEE
Confidence 888 899998855
No 45
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.63 E-value=3.2e-15 Score=130.23 Aligned_cols=130 Identities=15% Similarity=0.023 Sum_probs=99.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|++++..|+|+|+|..|+..++.. .
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 59 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---------------------------------F---- 59 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---------------------------------C----
Confidence 567999999999999999999998999999999998655411 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
.++.+..+| .. ...++||+|++...+...++...+++++.++|||||+++-..+... +.. ..+
T Consensus 60 -------~~v~~~~~d-~~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~---~~~-~~~ 122 (170)
T 3i9f_A 60 -------DSVITLSDP-KE-----IPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE---NTG-IGP 122 (170)
T ss_dssp -------TTSEEESSG-GG-----SCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS---CCS-SSS
T ss_pred -------CCcEEEeCC-CC-----CCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc---ccc-cCc
Confidence 125677788 22 2357999999998887777889999999999999999986432211 100 011
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 331 EMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.....++.++++++++ ||++++..
T Consensus 123 ~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp CGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred hHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 1234589999999997 99999865
No 46
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.63 E-value=3.9e-15 Score=141.37 Aligned_cols=141 Identities=17% Similarity=0.112 Sum_probs=105.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 128 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA--------------------------------- 128 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc---------------------------------
Confidence 5679999999999999999998 999999999999997665322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhh-------
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHF------- 322 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~------- 322 (394)
....++.+..+|+.++. ..+++||+|++...+...++...+|++++++|||||+++-..|...+.
T Consensus 129 -----~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 200 (297)
T 2o57_A 129 -----GLADNITVKYGSFLEIP---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQ 200 (297)
T ss_dssp -----TCTTTEEEEECCTTSCS---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGH
T ss_pred -----CCCcceEEEEcCcccCC---CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHH
Confidence 01124788999998753 346899999998777666778899999999999999999654322110
Q ss_pred --hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 323 --ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 323 --~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..... ..-..+.+++.++++++||++++..
T Consensus 201 ~~~~~~~----~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 201 PILDRIK----LHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp HHHHHHT----CSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHhc----CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 00000 0123589999999999999998854
No 47
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.63 E-value=8.3e-15 Score=138.41 Aligned_cols=155 Identities=12% Similarity=0.068 Sum_probs=107.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH-HcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEIS-HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA-~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.++.+.+.++. .++.+|||+|||+|.++..|+ ..|..|+|+|+|..|+..++-.+...
T Consensus 52 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~------------------ 110 (287)
T 1kpg_A 52 KIDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS------------------ 110 (287)
T ss_dssp HHHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC------------------
T ss_pred HHHHHHHHcCC---CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44444444432 256799999999999999999 66999999999999997665322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~w 312 (394)
....++.+..+|+.++ + ++||+|++...+... ++...+|++++++|||||++
T Consensus 111 --------------------~~~~~~~~~~~d~~~~---~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 111 --------------------ENLRSKRVLLAGWEQF---D---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVM 164 (287)
T ss_dssp --------------------CCCSCEEEEESCGGGC---C---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCCeEEEECChhhC---C---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEE
Confidence 0112478899998764 2 789999988766554 67889999999999999999
Q ss_pred EEecCcchh-----------------hhhcc--CCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 313 INLGPLLYH-----------------FADLY--GQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 313 IN~GPLlyh-----------------~~~~~--g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
+-..+.... +.+-. ..-+ .....+.+++.++++++||+++....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 165 LLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFP-GGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp EEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTST-TCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEEEecCCCccccccccccccccccchhhhHHheeCC-CCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 853221100 00000 0000 012359999999999999999986643
No 48
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.63 E-value=3.7e-15 Score=135.23 Aligned_cols=149 Identities=14% Similarity=0.212 Sum_probs=101.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL----------------------------RLPR 80 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC----------------------------CCCH
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh----------------------------cCCc
Confidence 46799999999999999999987 58999999999997666322100 0000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCcchh--hhh
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLYH--FAD 324 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKpGG~wIN~GPLlyh--~~~ 324 (394)
. ...++.++.+|+.... ...++||+|++...+.. .+++..+++.++++|||||++|-.....|. +..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 151 (217)
T 3jwh_A 81 N------QWERLQLIQGALTYQD---KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN 151 (217)
T ss_dssp H------HHTTEEEEECCTTSCC---GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-
T ss_pred c------cCcceEEEeCCccccc---ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc
Confidence 0 0114788999975432 23578999998876553 335689999999999999988853221121 100
Q ss_pred cc-CC--CCCccccCCHHHHH----HHHHhCCCEEEEEe
Q 016155 325 LY-GQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 356 (394)
Q Consensus 325 ~~-g~--~~~~~ieLS~eEl~----~ll~~~GF~ii~e~ 356 (394)
.. +. .......++.+++. +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 152 LPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp ----------CCSCBCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred cccccccccccccccCHHHHHHHHHHHHHHcCceEEEEe
Confidence 00 00 01234568999999 99999999987643
No 49
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.62 E-value=4.1e-15 Score=140.70 Aligned_cols=146 Identities=16% Similarity=0.143 Sum_probs=104.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
..+++.+... ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 110 ~~~~~~~~~~-------~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~----------------- 165 (286)
T 3m70_A 110 GDVVDAAKII-------SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKE----------------- 165 (286)
T ss_dssp HHHHHHHHHS-------CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhhcc-------CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 3466665542 4679999999999999999999999999999999997766332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~ 311 (394)
+.++.+..+|+.++.. .++||+|++...+. +.+++..+++.+.++|||||+
T Consensus 166 -----------------------~~~~~~~~~d~~~~~~----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 166 -----------------------NLNISTALYDINAANI----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp -----------------------TCCEEEEECCGGGCCC----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred -----------------------CCceEEEEeccccccc----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 0137889999887532 58899999876443 446688999999999999999
Q ss_pred EEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 312 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 312 wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
++-+.+..- .....+......++.++|++++.. |+++..
T Consensus 219 l~i~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 219 NLIVAAMST---DDVPCPLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp EEEEEEBCC---SSSCCSSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred EEEEEecCC---CCCCCCCCccccCCHHHHHHHhcC--CEEEEE
Confidence 764322110 011111112457899999999854 998874
No 50
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=7.6e-15 Score=135.78 Aligned_cols=155 Identities=10% Similarity=-0.014 Sum_probs=109.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+..+.+.++.. .++.+|||+|||+|.++..|++++. .|+|+|+|..|+..++-.+...
T Consensus 33 ~~~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------ 92 (257)
T 3f4k_A 33 ATRKAVSFINEL--TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA------------------ 92 (257)
T ss_dssp HHHHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc------------------
Confidence 444555555432 2567999999999999999999976 9999999999997665322110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...+++.++.+|+.++. ...++||+|++...+... +..++++.++++|||||+++-
T Consensus 93 --------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~ 148 (257)
T 3f4k_A 93 --------------------NCADRVKGITGSMDNLP---FQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAV 148 (257)
T ss_dssp --------------------TCTTTEEEEECCTTSCS---SCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEE
T ss_pred --------------------CCCCceEEEECChhhCC---CCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEE
Confidence 01124788999997753 346899999988766655 678999999999999999986
Q ss_pred ecCcchhhh------hccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 315 LGPLLYHFA------DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 315 ~GPLlyh~~------~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..|...... ..... ...-..+.+++.++++++||+++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 149 SEASWFTSERPAEIEDFWMD--AYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EEEEESSSCCCHHHHHHHHH--HCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EEeeccCCCChHHHHHHHHH--hCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 443211100 00000 00114589999999999999998854
No 51
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.62 E-value=2.5e-14 Score=135.23 Aligned_cols=109 Identities=13% Similarity=0.117 Sum_probs=79.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+..... ...
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------------------------~~~----- 107 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRK------------------------EPA----- 107 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTT------------------------SHH-----
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhccc------------------------ccc-----
Confidence 457999999999999999999999999999999999766532110000 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccCChhh-------HHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFIDTAHN-------IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~-fFlDta~n-------i~~yl~~I~~~LKpGG~wIN 314 (394)
..++.+..+|+.++...-...++||+|++. ..+....+ ...+++.++++|||||++|-
T Consensus 108 ------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 108 ------FDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp ------HHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ------cceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 013677888887753000135899999987 44444333 88999999999999999993
No 52
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.62 E-value=7.9e-15 Score=135.67 Aligned_cols=143 Identities=15% Similarity=0.165 Sum_probs=105.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|+.+|..|+|+|+|..|+..++..+... .
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------- 67 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK--------------------------G------- 67 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 6779999999999999999999999999999999997665322110 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc------hhhhh
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL------YHFAD 324 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLl------yh~~~ 324 (394)
..++.+..+|+.++. ...++||+|++.+.+....++..++++++++|||||+++-..+.. ..+..
T Consensus 68 ------~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 138 (239)
T 1xxl_A 68 ------VENVRFQQGTAESLP---FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVN 138 (239)
T ss_dssp ------CCSEEEEECBTTBCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHH
T ss_pred ------CCCeEEEecccccCC---CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHH
Confidence 013778899987753 346899999988766666678899999999999999998532211 11100
Q ss_pred c---cCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 325 L---YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 325 ~---~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
. .. .+.....++.+++.++++++||+++...
T Consensus 139 ~~~~~~-~~~~~~~~~~~~~~~ll~~aGf~~~~~~ 172 (239)
T 1xxl_A 139 HLNRLR-DPSHVRESSLSEWQAMFSANQLAYQDIQ 172 (239)
T ss_dssp HHHHHH-CTTCCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHhc-cccccCCCCHHHHHHHHHHCCCcEEEEE
Confidence 0 00 1111235799999999999999988743
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.61 E-value=8.8e-15 Score=137.05 Aligned_cols=156 Identities=11% Similarity=0.008 Sum_probs=109.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+..+.+.++.. .++.+|||+|||+|.++..||+++. .|+|+|+|..|+..++..+...
T Consensus 33 ~~~~~l~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 92 (267)
T 3kkz_A 33 VTLKALSFIDNL--TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS------------------ 92 (267)
T ss_dssp HHHHHHTTCCCC--CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcccC--CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc------------------
Confidence 444455555421 2678999999999999999999976 9999999999997666332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.+|+.++. ...++||+|++...+... +...+++.++++|||||+++-
T Consensus 93 --------------------~~~~~v~~~~~d~~~~~---~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~ 148 (267)
T 3kkz_A 93 --------------------GLQNRVTGIVGSMDDLP---FRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAV 148 (267)
T ss_dssp --------------------TCTTTEEEEECCTTSCC---CCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEE
T ss_pred --------------------CCCcCcEEEEcChhhCC---CCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEE
Confidence 01134789999998753 236899999988655555 678999999999999999986
Q ss_pred ecCcchhh------hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 315 LGPLLYHF------ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 315 ~GPLlyh~------~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
..+..... ..... ....-..+.+++.++++++||+++....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 149 SECSWFTDERPAEINDFWM--DAYPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp EEEEESSSCCCHHHHHHHH--HHCTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeeecCCCChHHHHHHHH--HhCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 44321100 00000 0001235899999999999999998653
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.61 E-value=1.2e-14 Score=139.92 Aligned_cols=155 Identities=13% Similarity=-0.018 Sum_probs=108.8
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCC
Q 016155 158 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 236 (394)
Q Consensus 158 ~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~ 236 (394)
+.|.+.++.. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 106 ~~l~~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------- 163 (312)
T 3vc1_A 106 EFLMDHLGQA--GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL-------------------- 163 (312)
T ss_dssp HHHHTTSCCC--CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHhccC--CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--------------------
Confidence 4455555421 25779999999999999999999 999999999999997666322110
Q ss_pred cccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 016155 237 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 237 ~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G 316 (394)
....++.+..+|+.++. ...++||+|++...+... +...+|++++++|||||++|-..
T Consensus 164 ------------------~~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 164 ------------------RIDDHVRSRVCNMLDTP---FDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ------------------TCTTTEEEEECCTTSCC---CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCceEEEECChhcCC---CCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 01134789999998753 346899999988655555 38899999999999999999643
Q ss_pred CcchhhhhccCC------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 317 PLLYHFADLYGQ------EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 317 PLlyh~~~~~g~------~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+........... .....-..+.+++.++++++||+++...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 222 GCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp EEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 321110000000 0000124689999999999999998855
No 55
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.61 E-value=1e-14 Score=132.34 Aligned_cols=149 Identities=15% Similarity=0.259 Sum_probs=101.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID----------------------------RLPE 80 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG----------------------------GSCH
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh----------------------------cccc
Confidence 46799999999999999999998 69999999999997666322110 0000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecCcchh--hhh
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYH--FAD 324 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~wIN~GPLlyh--~~~ 324 (394)
. ...++.++.+|+..+. ...++||+|++...+.... ++..+++.++++|||||++|......|. |..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 151 (219)
T 3jwg_A 81 M------QRKRISLFQSSLVYRD---KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN 151 (219)
T ss_dssp H------HHTTEEEEECCSSSCC---GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC
T ss_pred c------cCcceEEEeCcccccc---cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc
Confidence 0 0014788999985432 2357899999887655444 4579999999999999988743211110 100
Q ss_pred cc-CC--CCCccccCCHHHHH----HHHHhCCCEEEEEe
Q 016155 325 LY-GQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 356 (394)
Q Consensus 325 ~~-g~--~~~~~ieLS~eEl~----~ll~~~GF~ii~e~ 356 (394)
.. +. .......++.+++. +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 152 LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp T-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEe
Confidence 00 00 01124567999999 88999999887654
No 56
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.61 E-value=4.9e-15 Score=137.01 Aligned_cols=159 Identities=14% Similarity=0.160 Sum_probs=111.4
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.+..+++.|.+..... .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.
T Consensus 22 ~~~~~~~~l~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------- 82 (263)
T 2yqz_A 22 VAGQIATAMASAVHPK--GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIA----------------- 82 (263)
T ss_dssp HHHHHHHHHHHHCCCS--SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTT-----------------
T ss_pred HHHHHHHHHHHhhcCC--CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----------------
Confidence 3556777765422211 256799999999999999999999999999999999976552210
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
....++.+..+|+.++. ...++||+|++.+.+...++...++++++++|||||+
T Consensus 83 -----------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 83 -----------------------GVDRKVQVVQADARAIP---LPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp -----------------------TSCTTEEEEESCTTSCC---SCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred -----------------------ccCCceEEEEcccccCC---CCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcE
Confidence 00124788999987753 3467899999988777777888999999999999999
Q ss_pred EEEe-c-C---cc--hh--hh---hccCCC-CCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 312 WINL-G-P---LL--YH--FA---DLYGQE-DEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 312 wIN~-G-P---Ll--yh--~~---~~~g~~-~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
++.. + + .. +. +. ...+.+ +.....++.+++.++++++||+++..
T Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 137 LLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 9853 1 1 10 00 00 011111 10122468899999999999997763
No 57
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=9.8e-15 Score=140.32 Aligned_cols=154 Identities=12% Similarity=0.033 Sum_probs=108.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.++.+.+.++. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 78 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 136 (318)
T 2fk8_A 78 KVDLNLDKLDL---KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI------------------ 136 (318)
T ss_dssp HHHHHHTTSCC---CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHhcCC---CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44445544432 25679999999999999999998 999999999999997766332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~w 312 (394)
....++.+..+|+.++ .++||+|++...+... ++...+++++.++|||||++
T Consensus 137 --------------------~~~~~v~~~~~d~~~~------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 137 --------------------DTNRSRQVLLQGWEDF------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp --------------------CCSSCEEEEESCGGGC------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCceEEEECChHHC------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 0112478899998765 1689999988766554 67899999999999999999
Q ss_pred EEecCcchh---hh--------------hcc--CCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 313 INLGPLLYH---FA--------------DLY--GQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 313 IN~GPLlyh---~~--------------~~~--g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
+-..|.... .. +.. ..-+ .....+.+++.++++++||++++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 191 TVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFP-GGRLPSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp EEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTST-TCCCCCHHHHHHHHHHTTCBCCCCEE
T ss_pred EEEEeccCCchhhhhccccccccccchhhHHHHhcCC-CCcCCCHHHHHHHHHhCCCEEEEEEe
Confidence 853322111 00 000 0001 12235999999999999999987543
No 58
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=5.6e-15 Score=138.60 Aligned_cols=151 Identities=14% Similarity=0.098 Sum_probs=107.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
..+.+.|.+.++.. ++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++ +.
T Consensus 20 ~~~~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-------~~-------------- 75 (261)
T 3ege_A 20 IRIVNAIINLLNLP---KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-------VH-------------- 75 (261)
T ss_dssp HHHHHHHHHHHCCC---TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-------CC--------------
T ss_pred HHHHHHHHHHhCCC---CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-------hc--------------
Confidence 34667777666532 5789999999999999999999999999999999974211 00
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
.++.+..+|+.++. ...++||+|++.+.+...++...++++++++|| ||+++
T Consensus 76 ------------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~ 127 (261)
T 3ege_A 76 ------------------------PQVEWFTGYAENLA---LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIV 127 (261)
T ss_dssp ------------------------TTEEEECCCTTSCC---SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEE
T ss_pred ------------------------cCCEEEECchhhCC---CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEE
Confidence 03788999987753 346899999999877766888999999999999 99666
Q ss_pred Ee--cCc----chhhhhccC-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 314 NL--GPL----LYHFADLYG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 314 N~--GPL----lyh~~~~~g-~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
-+ +|- .|...-... .........+.+++. +++++||+.+....
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 128 LLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp EEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred EEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 42 221 111000000 000012245778899 99999999888653
No 59
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.60 E-value=3.4e-14 Score=128.53 Aligned_cols=127 Identities=15% Similarity=0.134 Sum_probs=95.3
Q ss_pred CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccc
Q 016155 141 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAG 220 (394)
Q Consensus 141 WS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~ 220 (394)
|+.....+.......+++.|.+.++ ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----- 82 (227)
T 1ve3_A 13 YTDINSQEYRSRIETLEPLLMKYMK-----KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKS----- 82 (227)
T ss_dssp TTCTTSHHHHHHHHHHHHHHHHSCC-----SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----
T ss_pred hhcccHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----
Confidence 4433333333445567777777665 367999999999999999999999999999999999766532210
Q ss_pred ccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc--cCChhhHHHH
Q 016155 221 EWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHNIVEY 298 (394)
Q Consensus 221 ~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fF--lDta~ni~~y 298 (394)
.+.++.++.+|+.++. ...++||+|++... +....+..++
T Consensus 83 -----------------------------------~~~~~~~~~~d~~~~~---~~~~~~D~v~~~~~~~~~~~~~~~~~ 124 (227)
T 1ve3_A 83 -----------------------------------RESNVEFIVGDARKLS---FEDKTFDYVIFIDSIVHFEPLELNQV 124 (227)
T ss_dssp -----------------------------------TTCCCEEEECCTTSCC---SCTTCEEEEEEESCGGGCCHHHHHHH
T ss_pred -----------------------------------cCCCceEEECchhcCC---CCCCcEEEEEEcCchHhCCHHHHHHH
Confidence 0023678899988753 23578999998765 5666778899
Q ss_pred HHHHHHhccCCcEEEEe
Q 016155 299 IEIISRILKDGGVWINL 315 (394)
Q Consensus 299 l~~I~~~LKpGG~wIN~ 315 (394)
++.++++|||||++|-.
T Consensus 125 l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 125 FKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp HHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEE
Confidence 99999999999999854
No 60
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=1.1e-14 Score=138.37 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=110.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
+++.+.+.+... .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++.....
T Consensus 9 ~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~----------------- 69 (284)
T 3gu3_A 9 YVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL----------------- 69 (284)
T ss_dssp HHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-----------------
T ss_pred HHHHHHHHHhcc--CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-----------------
Confidence 455555555332 26789999999999999999998 78999999999999766532210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~w 312 (394)
.+.++.+..+|+.++.. .++||+|++...+...++...+++.++++|||||++
T Consensus 70 -----------------------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 122 (284)
T 3gu3_A 70 -----------------------LPYDSEFLEGDATEIEL----NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKI 122 (284)
T ss_dssp -----------------------SSSEEEEEESCTTTCCC----SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEE
T ss_pred -----------------------cCCceEEEEcchhhcCc----CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEE
Confidence 01147899999987532 468999999988777788889999999999999999
Q ss_pred EEecCcc----hhhhhccCC------------------CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 313 INLGPLL----YHFADLYGQ------------------EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 313 IN~GPLl----yh~~~~~g~------------------~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+-..|.. ..+..+.+. .....-..+.+++.++++++||+.+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 123 ICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp EEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEE
T ss_pred EEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEE
Confidence 9665541 111000000 0000112356789999999999998763
No 61
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=2.3e-13 Score=122.48 Aligned_cols=123 Identities=17% Similarity=-0.002 Sum_probs=93.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||++| ..|+|+|+|..|+..++..+...
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 87 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF-------------------------------- 87 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--------------------------------
Confidence 56799999999999999999998 89999999999997766322110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 328 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~ 328 (394)
.. .++.++.+|+.+... ..+.||+|+....+. ++.++++.+.++|||||+++-..+.
T Consensus 88 ------~~-~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~---------- 144 (204)
T 3e05_A 88 ------VA-RNVTLVEAFAPEGLD---DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT---------- 144 (204)
T ss_dssp ------TC-TTEEEEECCTTTTCT---TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB----------
T ss_pred ------CC-CcEEEEeCChhhhhh---cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc----------
Confidence 00 237888999876543 236799998776444 6779999999999999999853221
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 329 EDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 329 ~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
.-+.+++.+++++.||++..
T Consensus 145 ------~~~~~~~~~~l~~~g~~~~~ 164 (204)
T 3e05_A 145 ------LDTLTKAVEFLEDHGYMVEV 164 (204)
T ss_dssp ------HHHHHHHHHHHHHTTCEEEE
T ss_pred ------cccHHHHHHHHHHCCCceeE
Confidence 12567888999999995443
No 62
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=1.3e-14 Score=138.34 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=84.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.|.++.| .+.+|||+|||+|.++..|+.+|.+|+|+|+|..||..++ +
T Consensus 29 l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~-------~----------------- 79 (257)
T 4hg2_A 29 LFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL-------R----------------- 79 (257)
T ss_dssp HHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC-------C-----------------
T ss_pred HHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh-------h-----------------
Confidence 7788888766 4568999999999999999999999999999999984211 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
..++.+..+|+.++. ..+++||+|++...+.-. +...++++++|+|||||+++-
T Consensus 80 ---------------------~~~v~~~~~~~e~~~---~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 80 ---------------------HPRVTYAVAPAEDTG---LPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp ---------------------CTTEEEEECCTTCCC---CCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------------cCCceeehhhhhhhc---ccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEE
Confidence 013788999988763 357899999987655433 466899999999999999974
No 63
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.55 E-value=2.8e-14 Score=127.76 Aligned_cols=156 Identities=19% Similarity=0.126 Sum_probs=105.8
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh-HHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL-ALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 230 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRL-a~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~ 230 (394)
.|..+++.+...- ++.+|||+|||+|.+ ...++..|+.|+|+|+|..|+..++..+...
T Consensus 10 ~~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------- 69 (209)
T 2p8j_A 10 QLYRFLKYCNESN------LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------------- 69 (209)
T ss_dssp HHHHHHHHHHHSS------SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH--------------
T ss_pred hHHHHHHHHhccC------CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--------------
Confidence 3455666666432 456999999999998 6677888999999999999997665322100
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccC
Q 016155 231 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKD 308 (394)
Q Consensus 231 ~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKp 308 (394)
+.++.+..+|+.++. ...++||+|++...+.. ..++..++++++++|||
T Consensus 70 --------------------------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 120 (209)
T 2p8j_A 70 --------------------------NFKLNISKGDIRKLP---FKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKP 120 (209)
T ss_dssp --------------------------TCCCCEEECCTTSCC---SCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred --------------------------CCceEEEECchhhCC---CCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCC
Confidence 012567888987753 23578999997643332 47788999999999999
Q ss_pred CcEEEEec--C--cchh---------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 309 GGVWINLG--P--LLYH---------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 309 GG~wIN~G--P--Llyh---------~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
||+++-.. + ..|. |.......+.....++.+|+.+++...||...++.
T Consensus 121 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 121 GGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp EEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 99998421 1 1110 00000011111235799999999999999887754
No 64
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.54 E-value=4.6e-14 Score=140.68 Aligned_cols=152 Identities=18% Similarity=0.151 Sum_probs=104.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..|+++ +..|+|+|+|..|+..++-.+...... ... .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---------------------~~g-~-- 138 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK---------------------FFG-S-- 138 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH---------------------HHS-S--
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh---------------------ccc-c--
Confidence 5679999999999999999986 679999999999997766332110000 000 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCC---CCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc-----
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL----- 319 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~---~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLl----- 319 (394)
....++.++.+|+.++... +...++||+|++...+...++...+|++++++|||||+++-..+..
T Consensus 139 -------~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~ 211 (383)
T 4fsd_A 139 -------PSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLS 211 (383)
T ss_dssp -------TTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCC
T ss_pred -------cCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccC
Confidence 0012478999999876211 3446899999999877777788899999999999999998532110
Q ss_pred hhhhhc---cCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 320 YHFADL---YGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 320 yh~~~~---~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
-..... .+.. ..-.++.+++.++++++||++++.
T Consensus 212 ~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~aGF~~v~~ 248 (383)
T 4fsd_A 212 EAAQQDPILYGEC--LGGALYLEDFRRLVAEAGFRDVRL 248 (383)
T ss_dssp HHHHHCHHHHHTT--CTTCCBHHHHHHHHHHTTCCCEEE
T ss_pred HhHhhhHHHhhcc--cccCCCHHHHHHHHHHCCCceEEE
Confidence 000000 0000 122478899999999999987763
No 65
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=6.3e-14 Score=129.18 Aligned_cols=154 Identities=12% Similarity=-0.056 Sum_probs=103.0
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 236 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~ 236 (394)
...+..+++.. .++.+|||+|||+|+++..||++|..|+|+|+|..|+..++..+.
T Consensus 44 ~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~---------------------- 99 (245)
T 3ggd_A 44 VVDLPRFELLF--NPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT---------------------- 99 (245)
T ss_dssp HHHHHHHTTTS--CTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC----------------------
T ss_pred HHHHHHHhhcc--CCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc----------------------
Confidence 34444444422 256789999999999999999999999999999999976552110
Q ss_pred cccCccccccCCCCCCCCCCCCceeEEecccccccCC-CC-CCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEE
Q 016155 237 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD-PS-QVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 237 ~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~-~~-~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~w 312 (394)
..++.++.+|+.++... +. ....||+|++...+.... +...++++++++|||||++
T Consensus 100 --------------------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 159 (245)
T 3ggd_A 100 --------------------AANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAM 159 (245)
T ss_dssp --------------------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEE
T ss_pred --------------------ccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 01378889998875321 00 012489999886555444 7889999999999999987
Q ss_pred EEe--cCcc--h--hhhhccCCCC----------CccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 313 INL--GPLL--Y--HFADLYGQED----------EMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 313 IN~--GPLl--y--h~~~~~g~~~----------~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+-+ ++.- + ......++.+ ...-.++.+|+.+++ .||+++...
T Consensus 160 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~~ 217 (245)
T 3ggd_A 160 YLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQG 217 (245)
T ss_dssp EEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEEE
T ss_pred EEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEecc
Confidence 643 2110 0 0000011111 011247999999999 899999865
No 66
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.54 E-value=1.7e-13 Score=131.45 Aligned_cols=145 Identities=10% Similarity=0.040 Sum_probs=100.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..||.. |..|+|+|+|..|+..++-.+...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------------------- 166 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH------------------------------- 166 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 5679999999999999999622 679999999999997665322100
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEEEec----Cc--
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWINLG----PL-- 318 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~LKpGG~wIN~G----PL-- 318 (394)
...+++.++.+|+.++. .. ++||+|++.. ++........+++.++++|||||++|-.. |.
T Consensus 167 -------~~~~~v~~~~~d~~~~~---~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 235 (305)
T 3ocj_A 167 -------ALAGQITLHRQDAWKLD---TR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALS 235 (305)
T ss_dssp -------TTGGGEEEEECCGGGCC---CC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTC
T ss_pred -------CCCCceEEEECchhcCC---cc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCccc
Confidence 11234889999998863 23 8999999864 34455555668999999999999999422 11
Q ss_pred -chhhh-hcc--------------CCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 319 -LYHFA-DLY--------------GQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 319 -lyh~~-~~~--------------g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
.+.|. +.. .........++.+++.++++++||++++...
T Consensus 236 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 236 PDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp TTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 11110 000 0000011236999999999999999998663
No 67
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.53 E-value=2.6e-14 Score=137.10 Aligned_cols=198 Identities=14% Similarity=0.195 Sum_probs=113.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccc------------------------ccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETA------------------------GEWNI 224 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~------------------------~~~~i 224 (394)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+...... ....-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4679999999999999999998 789999999999998877543221000 00011
Q ss_pred ccccccccCCCCcccCccccccCCCCCC---CCCCCCceeEEecccccccC--CCCCCCCccEEEEeccc---C---Chh
Q 016155 225 YPWIHSNCNSLSDSDQLRPVSIPDIHPA---SAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFI---D---TAH 293 (394)
Q Consensus 225 ~Pfi~~~sn~~~~~~qlr~v~iPDv~p~---~~~~~~~ls~~~GDf~ely~--~~~~~~~fD~VvT~fFl---D---ta~ 293 (394)
||.....+ ..++..|..... ......++.|..+|+..... .+...++||+|++...+ . ...
T Consensus 126 ~p~~~~~~--------~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 126 FPASLTAS--------RGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccchhhhc--------cCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 12111000 011111221110 01223579999999975320 01246899999987644 2 344
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCcchh-hhhccCCC-----CCccccCCHHHHHHHHHh--CCCEEEEEeeccccCCCC
Q 016155 294 NIVEYIEIISRILKDGGVWINLGPLLYH-FADLYGQE-----DEMSIELSLEDVKRVALH--YGFEFEKEKTIETTYTTN 365 (394)
Q Consensus 294 ni~~yl~~I~~~LKpGG~wIN~GPLlyh-~~~~~g~~-----~~~~ieLS~eEl~~ll~~--~GF~ii~e~~i~~~Y~~d 365 (394)
++.++|+.++++|||||++|- .|..|. |....... ....+.+..+++..+|.+ +||+.++.-... ..
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil-~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~-~~--- 272 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVL-EPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATP-HN--- 272 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE-ECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC---------
T ss_pred HHHHHHHHHHHHhCCCcEEEE-ecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccC-CC---
Confidence 788999999999999999995 333332 21110000 012457788999999998 999887644211 00
Q ss_pred cccccccccceEEEEEEEcC
Q 016155 366 PRSMMQNRYFTAFWTMRKKS 385 (394)
Q Consensus 366 ~~sm~~~~Y~~~f~va~K~~ 385 (394)
....+....++.+|+.
T Consensus 273 ----~~~g~~r~i~~~~k~~ 288 (292)
T 3g07_A 273 ----TSKGFQRPVYLFHKAR 288 (292)
T ss_dssp ----------CCCEEEECCC
T ss_pred ----CCCCccceEEEEEcCC
Confidence 1244556666777764
No 68
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.53 E-value=2.8e-14 Score=131.67 Aligned_cols=151 Identities=17% Similarity=0.092 Sum_probs=98.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
+++..+....+. ++.+|||+|||+|.++..|++.+. .|+|+|+|..|+..++-....
T Consensus 48 ~~~~~l~~~~~~----~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~------------------ 105 (236)
T 1zx0_A 48 PYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR------------------ 105 (236)
T ss_dssp HHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG------------------
T ss_pred HHHHHHHhhcCC----CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHh------------------
Confidence 456666655432 567999999999999999999887 899999999999766621110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE-eccc--C--ChhhHHHHHHHHHHhccC
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-CFFI--D--TAHNIVEYIEIISRILKD 308 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT-~fFl--D--ta~ni~~yl~~I~~~LKp 308 (394)
.+.++.++.+|+.++.. +..+++||+|++ .|-+ . ...+...++++++++|||
T Consensus 106 ----------------------~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp 162 (236)
T 1zx0_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------cCCCeEEEecCHHHhhc-ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC
Confidence 01237889999988621 234689999998 4432 1 233455779999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEE
Q 016155 309 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEF 352 (394)
Q Consensus 309 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~i 352 (394)
||+++-+....+. ......-........++....+.++||+.
T Consensus 163 gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 163 GGVLTYCNLTSWG--ELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEECCHHHHH--HHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CeEEEEEecCcHH--HhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 9999854322111 10000000011223455667788999984
No 69
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=7.5e-14 Score=125.54 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=101.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
.+++.|...++ ++.+|||+|||+|+++..|++.|. .|+|+|+|..|+..++..+...
T Consensus 49 ~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------- 106 (205)
T 3grz_A 49 LAMLGIERAMV-----KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN----------------- 106 (205)
T ss_dssp HHHHHHHHHCS-----SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 36666666543 467999999999999999999988 8999999999997666332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
.. .++.+..+|+.+.. .++||+|++...+ +.+..+++.+.++|||||+++
T Consensus 107 ---------------------~~-~~v~~~~~d~~~~~-----~~~fD~i~~~~~~---~~~~~~l~~~~~~L~~gG~l~ 156 (205)
T 3grz_A 107 ---------------------GI-YDIALQKTSLLADV-----DGKFDLIVANILA---EILLDLIPQLDSHLNEDGQVI 156 (205)
T ss_dssp ---------------------TC-CCCEEEESSTTTTC-----CSCEEEEEEESCH---HHHHHHGGGSGGGEEEEEEEE
T ss_pred ---------------------CC-CceEEEeccccccC-----CCCceEEEECCcH---HHHHHHHHHHHHhcCCCCEEE
Confidence 00 12678899987742 3789999987544 346788999999999999998
Q ss_pred EecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 314 NLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 314 N~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-.++. .-+.+++.+++++.||++++..
T Consensus 157 ~~~~~----------------~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 157 FSGID----------------YLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp EEEEE----------------GGGHHHHHHHHHHTTEEEEEEE
T ss_pred EEecC----------------cccHHHHHHHHHHcCCceEEee
Confidence 52211 1257889999999999998754
No 70
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.52 E-value=1.1e-13 Score=129.82 Aligned_cols=144 Identities=13% Similarity=0.166 Sum_probs=104.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++-.+... .
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 85 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN--------------------------G----- 85 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--------------------------T-----
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-----
Confidence 6779999999999999999999 689999999999997665332110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecC----cchhhhh
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP----LLYHFAD 324 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GP----Llyh~~~ 324 (394)
..++.+..+|+.++. ...++||+|++...+...++...+++.++++|||||+++-..| ..++-..
T Consensus 86 --------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 154 (276)
T 3mgg_A 86 --------IKNVKFLQANIFSLP---FEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEG 154 (276)
T ss_dssp --------CCSEEEEECCGGGCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCC
T ss_pred --------CCCcEEEEcccccCC---CCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCc
Confidence 013788999988753 3468999999998777777788999999999999999985322 1111000
Q ss_pred --------cc-C-CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 325 --------LY-G-QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 325 --------~~-g-~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.. . ......-.++.+++.++++++||+++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~ 196 (276)
T 3mgg_A 155 KKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVE 196 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEe
Confidence 00 0 00000123567899999999999998855
No 71
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.52 E-value=3.5e-14 Score=141.98 Aligned_cols=156 Identities=17% Similarity=0.096 Sum_probs=107.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+.+.+.+.++.. ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-. . .
T Consensus 94 ~~~~~l~~~~~~~---~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-------~-~------------ 150 (416)
T 4e2x_A 94 MLARDFLATELTG---PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-------G-I------------ 150 (416)
T ss_dssp HHHHHHHHTTTCS---SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-------T-C------------
T ss_pred HHHHHHHHHhCCC---CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-------C-C------------
Confidence 3555565555422 567999999999999999999999999999999999655411 0 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
+... ..+..++..++. ...++||+|++...+...+++..++++++++|||||+++-
T Consensus 151 ------------~~~~---------~~~~~~~~~~l~---~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 151 ------------RVRT---------DFFEKATADDVR---RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp ------------CEEC---------SCCSHHHHHHHH---HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEE
T ss_pred ------------Ccce---------eeechhhHhhcc---cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEE
Confidence 0000 011223333332 2247899999998888778899999999999999999996
Q ss_pred ecCcchhhhh--ccC-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 315 LGPLLYHFAD--LYG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 315 ~GPLlyh~~~--~~g-~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
..|..-.... .+. ........++.+++.++++++||+++....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 207 EDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 4443111100 000 001123457999999999999999998663
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.51 E-value=1.8e-13 Score=133.03 Aligned_cols=153 Identities=12% Similarity=0.019 Sum_probs=94.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..++..| ..|+|+|+|..||..|+-...... .. .+.+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~----~~---------------~~~~~------ 102 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLN----SG---------------IKTKY------ 102 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC----C-------------------CC------
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhcc----cc---------------ccccc------
Confidence 46799999999999777766665 789999999999988774321100 00 00000
Q ss_pred CCCCCCCCCceeEEeccc------ccccCCCCCCCCccEEEEeccc---CChhhHHHHHHHHHHhccCCcEEEEecCc--
Q 016155 250 HPASAGITEGFSMCGGDF------VEVYSDPSQVGAWDAVVTCFFI---DTAHNIVEYIEIISRILKDGGVWINLGPL-- 318 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf------~ely~~~~~~~~fD~VvT~fFl---Dta~ni~~yl~~I~~~LKpGG~wIN~GPL-- 318 (394)
-++.|.++|+ .++.. +...++||+|++.|.+ -..+++..+|++++++|||||++|-..|-
T Consensus 103 --------~~~~f~~~d~~~d~~~~~l~~-~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 103 --------YKFDYIQETIRSDTFVSSVRE-VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp --------CEEEEEECCTTSSSHHHHHHT-TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred --------cccchhhhhcccchhhhhhhc-cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 0134555555 22211 1235799999877533 22235789999999999999999953321
Q ss_pred --chhhh--------h---------------c----c---C-CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 319 --LYHFA--------D---------------L----Y---G-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 319 --lyh~~--------~---------------~----~---g-~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
.+.+. + + + + ..+-...-.+.++|+++++++||+++....
T Consensus 174 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~ 245 (302)
T 2vdw_A 174 KLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVD 245 (302)
T ss_dssp HHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHhcCCcccccccccccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecC
Confidence 11110 0 0 0 0 000001246789999999999999998653
No 73
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.51 E-value=7.1e-13 Score=120.92 Aligned_cols=124 Identities=11% Similarity=-0.045 Sum_probs=93.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..+|++|..|+|+|+|..|+..++..+...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 100 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTY---------------------------------- 100 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999997766322110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
...+++.++.+|+.+... ..+.||+|+...-+ +.. +++.+.++|||||++|-..+.
T Consensus 101 ----g~~~~v~~~~~d~~~~~~---~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~------------ 156 (204)
T 3njr_A 101 ----GLSPRMRAVQGTAPAALA---DLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT------------ 156 (204)
T ss_dssp ----TCTTTEEEEESCTTGGGT---TSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS------------
T ss_pred ----CCCCCEEEEeCchhhhcc---cCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC------------
Confidence 011247889999988432 13579999865422 455 999999999999999853221
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 331 EMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.-+.+++.+++++.||+++...
T Consensus 157 ----~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 157 ----LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp ----HHHHHHHHHHHHHHCSEEEEEE
T ss_pred ----cccHHHHHHHHHhCCCcEEEEE
Confidence 1146788888999999988754
No 74
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=6.6e-14 Score=128.60 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=91.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-. .
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 90 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---------------------------------A---- 90 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---------------------------------C----
Confidence 567999999999999999999999999999999999655411 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCC-CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQ-VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~-~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
.++.++.+|+.+.. |.. .++||+|++. .+...+++.++++|||||+++..+
T Consensus 91 -------~~~~~~~~d~~~~~--~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~------------- 142 (226)
T 3m33_A 91 -------PHADVYEWNGKGEL--PAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG------------- 142 (226)
T ss_dssp -------TTSEEEECCSCSSC--CTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE-------------
T ss_pred -------CCceEEEcchhhcc--CCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC-------------
Confidence 12678889986532 234 6799999987 245578999999999999999211
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-.++.+++.+++.+.||+++...
T Consensus 143 ----~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 143 ----PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp ----SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred ----CcCCHHHHHHHHHHCCCeEEEEE
Confidence 13466789999999999988743
No 75
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=3.1e-14 Score=132.74 Aligned_cols=153 Identities=16% Similarity=0.029 Sum_probs=100.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
|+.+.+.+..+. ++.+|||+|||+|..+..|++.+ -.|+|+|+|..|+..++-....
T Consensus 48 ~~m~~~a~~~~~----~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~------------------ 105 (236)
T 3orh_A 48 PYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR------------------ 105 (236)
T ss_dssp HHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG------------------
T ss_pred HHHHHHHHhhcc----CCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh------------------
Confidence 566666665542 67899999999999999999874 6899999999999776632110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE-----ecccCChhhHHHHHHHHHHhccC
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-----CFFIDTAHNIVEYIEIISRILKD 308 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT-----~fFlDta~ni~~yl~~I~~~LKp 308 (394)
.+.++.++.||+.++.. +..+++||.|+. .+-+....+...++++++|+|||
T Consensus 106 ----------------------~~~~~~~~~~~a~~~~~-~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkP 162 (236)
T 3orh_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------CCCceEEEeehHHhhcc-cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCC
Confidence 01236778888766532 234688999862 22345567788999999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 309 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 309 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
||+|+-+...... +....... .......+.+...|.++||+++.
T Consensus 163 GG~l~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 163 GGVLTYCNLTSWG-ELMKSKYS-DITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp EEEEEECCHHHHH-HHTTTTCS-CHHHHHHHHTHHHHHHHTCCGGG
T ss_pred CCEEEEEecCCch-hhhhhhhh-hhhhhhHHHHHHHHHHcCCeEEE
Confidence 9999854322111 00000000 01123445666677788998654
No 76
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=2e-13 Score=119.36 Aligned_cols=154 Identities=18% Similarity=0.159 Sum_probs=102.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..+++.+..|+|+|+|..|+..++..+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~---------------------------------- 78 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH---------------------------------- 78 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999997665322110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
....++.+..+|+.+... ..+.||+|++...+ +++..+++.+.++|||||+++-..+.
T Consensus 79 ----~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~------------ 136 (192)
T 1l3i_A 79 ----GLGDNVTLMEGDAPEALC---KIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAIL------------ 136 (192)
T ss_dssp ----TCCTTEEEEESCHHHHHT---TSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECB------------
T ss_pred ----CCCcceEEEecCHHHhcc---cCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecC------------
Confidence 001237788899877322 12589999976544 35678999999999999999853221
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe-eccccCCCCcccccccccceEEEEEEEc
Q 016155 331 EMSIELSLEDVKRVALHYGFEFEKEK-TIETTYTTNPRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~GF~ii~e~-~i~~~Y~~d~~sm~~~~Y~~~f~va~K~ 384 (394)
.-+.+++.+++++.||++.... .....+.......+...+-...++++|+
T Consensus 137 ----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~k~ 187 (192)
T 1l3i_A 137 ----LETKFEAMECLRDLGFDVNITELNIARGRALDRGTMMVSRNPVALIYTGVS 187 (192)
T ss_dssp ----HHHHHHHHHHHHHTTCCCEEEEEEEEEEEEETTEEEEEECCCEEEEECCC-
T ss_pred ----cchHHHHHHHHHHCCCceEEEEEEcccCeEecCceeecCCCCEEEEEEecc
Confidence 1145788899999999655432 1111111111122333444445567665
No 77
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=1e-13 Score=125.22 Aligned_cols=142 Identities=10% Similarity=0.030 Sum_probs=98.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 236 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~ 236 (394)
...|...++.. ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+..
T Consensus 40 ~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~--------------------- 95 (216)
T 3ofk_A 40 TQLLRLSLSSG---AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR--------------------- 95 (216)
T ss_dssp HHHHHHHTTTS---SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT---------------------
T ss_pred HHHHHHHcccC---CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc---------------------
Confidence 33444444422 567999999999999999999999999999999999766522100
Q ss_pred cccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc---CChhhHHHHHHHHHHhccCCcEEE
Q 016155 237 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI---DTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 237 ~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFl---Dta~ni~~yl~~I~~~LKpGG~wI 313 (394)
..++.++.+|+.++. ..++||+|++...+ .....+..+|+.++++|||||++|
T Consensus 96 --------------------~~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 96 --------------------WSHISWAATDILQFS----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp --------------------CSSEEEEECCTTTCC----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred --------------------CCCeEEEEcchhhCC----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 013788999998864 25889999988544 444556788999999999999999
Q ss_pred EecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 314 NLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 314 N~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
-..|..-.... . ......+.+..++.. +|..++
T Consensus 152 ~~~~~~~~~~~-~------~~~~~~~~~~~~~~~-~~~~~e 184 (216)
T 3ofk_A 152 FGSARDATCRR-W------GHVAGAETVITILTE-ALTEVE 184 (216)
T ss_dssp EEEECHHHHHH-T------TCSCCHHHHHHHHHH-HSEEEE
T ss_pred EEecCCCcchh-h------hhhhhHHHHHHHHHh-hccceE
Confidence 53332211111 0 113567777777765 455544
No 78
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=2.2e-13 Score=129.95 Aligned_cols=191 Identities=15% Similarity=0.192 Sum_probs=112.7
Q ss_pred CcchHHHHHHHHHHhhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHH----HHHHc--CCeE-
Q 016155 124 LADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLAL----EISHL--GFIS- 196 (394)
Q Consensus 124 ~~d~~kv~~~L~q~~RDWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~----eLA~~--Gf~v- 196 (394)
..|.+........+... +.. ...+...+...+..+...++. ..++.+|||+|||+|.++. .++.+ +..|
T Consensus 9 ~~d~~~y~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~--~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~ 84 (292)
T 2aot_A 9 FSDHGKYVESFRRFLNH-STE-HQCMQEFMDKKLPGIIGRIGD--TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCIN 84 (292)
T ss_dssp GGCHHHHHHHHHHHHTT-BSH-HHHHHHHHHHTHHHHSSSTTT--TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEE
T ss_pred cccHHHHHHHHHHHHHh-ccH-HHHHHHHHHHhchhHHhhccC--CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceee
Confidence 46777777777776654 221 122222222222222222211 1256799999999997654 34443 3433
Q ss_pred -EEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC---
Q 016155 197 -QGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS--- 272 (394)
Q Consensus 197 -~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~--- 272 (394)
+|+|.|..||..++-.+... . .+.. -.+.+..++..++..
T Consensus 85 ~~~vD~S~~ml~~a~~~~~~~---~-------------------~~~~--------------v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 85 NEVVEPSAEQIAKYKELVAKT---S-------------------NLEN--------------VKFAWHKETSSEYQSRML 128 (292)
T ss_dssp EEEECSCHHHHHHHHHHHHTC---S-------------------SCTT--------------EEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHhc---c-------------------CCCc--------------ceEEEEecchhhhhhhhc
Confidence 99999999997665322100 0 0000 014455666554320
Q ss_pred CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe--cC---c--chhhh-hccCCCCCccccCCHHHHHHH
Q 016155 273 DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL--GP---L--LYHFA-DLYGQEDEMSIELSLEDVKRV 344 (394)
Q Consensus 273 ~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~--GP---L--lyh~~-~~~g~~~~~~ieLS~eEl~~l 344 (394)
.++.+++||+|++.+-|...+|+...|++++++|||||+++-. .+ . +|... ...+ .+.....++.+++.++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFP-QDDLCQYITSDDLTQM 207 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSC-CCTTCCCCCHHHHHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhcc-CCCcccCCCHHHHHHH
Confidence 0123578999999888887788899999999999999999853 11 1 11111 1111 1111235799999999
Q ss_pred HHhCCCEEEEE
Q 016155 345 ALHYGFEFEKE 355 (394)
Q Consensus 345 l~~~GF~ii~e 355 (394)
++++||+++..
T Consensus 208 l~~aGf~~~~~ 218 (292)
T 2aot_A 208 LDNLGLKYECY 218 (292)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHCCCceEEE
Confidence 99999998873
No 79
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.49 E-value=1.5e-13 Score=122.76 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=87.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
+..+.+.|.+.++ ++.+|||+|||+|+++..|+++|+ .|+|+|+|..|+..++..+..
T Consensus 29 ~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---------------- 87 (215)
T 2pxx_A 29 FSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---------------- 87 (215)
T ss_dssp HHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT----------------
T ss_pred HHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc----------------
Confidence 4456777777653 567999999999999999999998 899999999999765521100
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC---------------ChhhHH
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---------------TAHNIV 296 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD---------------ta~ni~ 296 (394)
..++.+..+|+.++. ...++||+|++...++ ...++.
T Consensus 88 -------------------------~~~i~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (215)
T 2pxx_A 88 -------------------------VPQLRWETMDVRKLD---FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVD 139 (215)
T ss_dssp -------------------------CTTCEEEECCTTSCC---SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHH
T ss_pred -------------------------CCCcEEEEcchhcCC---CCCCcccEEEECcchhhhccccccccccccchhHHHH
Confidence 013678889988752 3457899999865432 134678
Q ss_pred HHHHHHHHhccCCcEEEEec
Q 016155 297 EYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 297 ~yl~~I~~~LKpGG~wIN~G 316 (394)
++++++.++|||||++|-..
T Consensus 140 ~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhCcCCCEEEEEe
Confidence 99999999999999999643
No 80
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.49 E-value=1.5e-13 Score=124.68 Aligned_cols=149 Identities=11% Similarity=0.047 Sum_probs=94.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHH-HHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMI-CSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~-~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..||++ |..|+|+|+|..||. +++...+....
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~----------------------------- 77 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK----------------------------- 77 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG-----------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh-----------------------------
Confidence 5679999999999999999999 789999999999986 33321111000
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC-----ChhhHHHHHHHHHHhccCCcEEEE-ecCcchh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKDGGVWIN-LGPLLYH 321 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD-----ta~ni~~yl~~I~~~LKpGG~wIN-~GPLlyh 321 (394)
....++.++.+|+.++.. ..+. |.|+..+-.. ..++...++++++++|||||+++- ++...|.
T Consensus 78 -------~~~~~v~~~~~d~~~l~~---~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 146 (218)
T 3mq2_A 78 -------GGLPNLLYLWATAERLPP---LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR 146 (218)
T ss_dssp -------TCCTTEEEEECCSTTCCS---CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT
T ss_pred -------cCCCceEEEecchhhCCC---CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc
Confidence 001247899999988532 3455 7776433110 112236899999999999999984 3322221
Q ss_pred hhh-ccCCCCCccccCCHHHHHHHHHhCCCEEEEEeecc
Q 016155 322 FAD-LYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIE 359 (394)
Q Consensus 322 ~~~-~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~ 359 (394)
... ..+..+........+++..++.++||+++..+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~~~ 185 (218)
T 3mq2_A 147 PSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRYLE 185 (218)
T ss_dssp TBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEEEC
T ss_pred ccccccccCCccchHHHHHHHHHHHHHcCCCceeeeccc
Confidence 100 11111111112234568889999999999866443
No 81
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.48 E-value=7.8e-13 Score=119.48 Aligned_cols=120 Identities=21% Similarity=0.201 Sum_probs=91.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.|... .++.+|||+|||+|.++..|+ ..|+|+|+|..
T Consensus 58 ~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~------------------------------- 97 (215)
T 2zfu_A 58 IARDLRQR------PASLVVADFGCGDCRLASSIR---NPVHCFDLASL------------------------------- 97 (215)
T ss_dssp HHHHHHTS------CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCS-------------------------------
T ss_pred HHHHHhcc------CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCC-------------------------------
Confidence 55555532 145689999999999998884 78999999974
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
++.+..+|+.++. ...++||+|++.+.+.. .++..+++.++++|||||++|-.
T Consensus 98 -----------------------~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 98 -----------------------DPRVTVCDMAQVP---LEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp -----------------------STTEEESCTTSCS---CCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred -----------------------CceEEEeccccCC---CCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEE
Confidence 0245667776642 23578999998877753 67889999999999999999864
Q ss_pred cCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 316 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 316 GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+. ....+.+++.++++++||+++...
T Consensus 151 ~~~--------------~~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 151 EVS--------------SRFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp ECG--------------GGCSCHHHHHHHHHHTTEEEEEEE
T ss_pred EcC--------------CCCCCHHHHHHHHHHCCCEEEEEe
Confidence 321 012389999999999999998754
No 82
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.48 E-value=9.6e-13 Score=122.06 Aligned_cols=129 Identities=16% Similarity=0.115 Sum_probs=94.4
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~--~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||. .|..|+|+|+|..|+..++......
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 117 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL-------------------------------- 117 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 467999999999999999994 5789999999999997776332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe-cCcchhhhhccC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYG 327 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~-GPLlyh~~~~~g 327 (394)
.. .++.++.+|+.++...+...++||+|++..+ .++..+++.++++|||||+++-. |+.
T Consensus 118 ------~~-~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~--------- 177 (240)
T 1xdz_A 118 ------QL-ENTTFCHDRAETFGQRKDVRESYDIVTARAV----ARLSVLSELCLPLVKKNGLFVALKAAS--------- 177 (240)
T ss_dssp ------TC-SSEEEEESCHHHHTTCTTTTTCEEEEEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC----------
T ss_pred ------CC-CCEEEEeccHHHhcccccccCCccEEEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCC---------
Confidence 00 1378899998876421112478999998663 45779999999999999999852 221
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
..-..+++.+.+++.||++++...
T Consensus 178 ------~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 178 ------AEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ------chHHHHHHHHHHHHcCCeEeEEEE
Confidence 011246788889999999987653
No 83
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=2.4e-13 Score=120.06 Aligned_cols=103 Identities=17% Similarity=0.081 Sum_probs=77.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..||++|..|+|+|+|..|+..++..+...
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~---------------------------------- 67 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL---------------------------------- 67 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH----------------------------------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999997776332210
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC--------ChhhHHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlD--------ta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
.. .++.++.+|+.++... ..++||+|+..+ |+. ...+....++.+.++|||||+++-
T Consensus 68 ----~~-~~v~~~~~~~~~l~~~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 68 ----GI-ENTELILDGHENLDHY--VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp ----TC-CCEEEEESCGGGGGGT--CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ----CC-CcEEEEeCcHHHHHhh--ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 00 2367777887765321 257899998763 443 345667889999999999999985
No 84
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=1.3e-12 Score=113.85 Aligned_cols=125 Identities=11% Similarity=-0.036 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+...
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 72 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL-------------------------------- 72 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--------------------------------
Confidence 5679999999999999999998 789999999999997766332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 328 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~ 328 (394)
....++ ++.+|+.+... ...++||+|+..+.+.. .++++.+.++|||||+++-..+.
T Consensus 73 ------~~~~~~-~~~~d~~~~~~--~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~---------- 129 (178)
T 3hm2_A 73 ------GVSDRI-AVQQGAPRAFD--DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT---------- 129 (178)
T ss_dssp ------TCTTSE-EEECCTTGGGG--GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS----------
T ss_pred ------CCCCCE-EEecchHhhhh--ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec----------
Confidence 011236 67788765432 22378999998776655 57899999999999999853221
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 329 EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 329 ~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.-+.+++..++++.|+++....
T Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 130 ------VESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp ------HHHHHHHHHHHHHHCCEEEEEE
T ss_pred ------cccHHHHHHHHHHcCCeeEEEE
Confidence 1145677888899999887744
No 85
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.47 E-value=1.4e-12 Score=113.27 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=92.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|++.+..|+|+|+|..|+..++..+... .
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------- 81 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKF--------------------------N------- 81 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999998899999999999997666322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
-.++.+..+|+.+... .++||+|++... .++.++++.+.++ |||+++-..+.
T Consensus 82 ------~~~~~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~------------ 133 (183)
T 2yxd_A 82 ------IKNCQIIKGRAEDVLD----KLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIV------------ 133 (183)
T ss_dssp ------CCSEEEEESCHHHHGG----GCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESC------------
T ss_pred ------CCcEEEEECCcccccc----CCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecc------------
Confidence 0137889999887332 368999988766 5677899999998 99999853321
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 331 EMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.-..+++.+++++.||++....
T Consensus 134 ----~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 134 ----LENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----cccHHHHHHHHHHcCCeEEEEE
Confidence 1135778899999999887643
No 86
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.47 E-value=5.9e-13 Score=128.00 Aligned_cols=165 Identities=14% Similarity=0.070 Sum_probs=107.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
.+++.|....+ ++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++-........
T Consensus 23 ~~~~~l~~~~~-----~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-------------- 83 (313)
T 3bgv_A 23 EFLEKVRQKKK-----RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR-------------- 83 (313)
T ss_dssp HHHHHHHHTC-------CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS--------------
T ss_pred HHHHHhhhccC-----CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc--------------
Confidence 35555554432 4679999999999999999976 568999999999997666332110000
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEeccccccc---CCCCCCCCccEEEEeccc----CChhhHHHHHHHHHHhc
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY---SDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRIL 306 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely---~~~~~~~~fD~VvT~fFl----Dta~ni~~yl~~I~~~L 306 (394)
... ....++.++.+|+.++. ..+...++||+|++.+.+ .+.+++..+|+.++++|
T Consensus 84 --~~~----------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~L 145 (313)
T 3bgv_A 84 --RDS----------------EYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERL 145 (313)
T ss_dssp --SCC-----------------CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTE
T ss_pred --ccc----------------cccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHh
Confidence 000 01124788999988753 111124689999998765 45567789999999999
Q ss_pred cCCcEEEEecCcc-------------------hh--hhhc--cCC--C-------C---CccccCCHHHHHHHHHhCCCE
Q 016155 307 KDGGVWINLGPLL-------------------YH--FADL--YGQ--E-------D---EMSIELSLEDVKRVALHYGFE 351 (394)
Q Consensus 307 KpGG~wIN~GPLl-------------------yh--~~~~--~g~--~-------~---~~~ieLS~eEl~~ll~~~GF~ 351 (394)
||||++|-..|-. |. |.+. .+. . + ...+.++.+++.++++++||+
T Consensus 146 kpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~ 225 (313)
T 3bgv_A 146 SPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMK 225 (313)
T ss_dssp EEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEE
T ss_pred CCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcE
Confidence 9999998532210 00 1110 000 0 0 012347899999999999999
Q ss_pred EEEEe
Q 016155 352 FEKEK 356 (394)
Q Consensus 352 ii~e~ 356 (394)
++...
T Consensus 226 ~v~~~ 230 (313)
T 3bgv_A 226 LVYKK 230 (313)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99855
No 87
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.47 E-value=5.1e-13 Score=127.42 Aligned_cols=152 Identities=12% Similarity=0.115 Sum_probs=105.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH---HcCCeEEEEeCCHHHHHHHhhhhhcccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEIS---HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 230 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA---~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~ 230 (394)
..+.+.|.++.+. ++.+|||+|||+|.++..|+ ..+..|+|+|+|..|+..++-.+...
T Consensus 23 ~~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------- 84 (299)
T 3g5t_A 23 SDFYKMIDEYHDG----ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-------------- 84 (299)
T ss_dssp HHHHHHHHHHCCS----CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC--------------
T ss_pred HHHHHHHHHHhcC----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc--------------
Confidence 3467777776542 57899999999999999999 56889999999999997766332210
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCC------CCccEEEEecccCChhhHHHHHHHHHH
Q 016155 231 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQV------GAWDAVVTCFFIDTAHNIVEYIEIISR 304 (394)
Q Consensus 231 ~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~------~~fD~VvT~fFlDta~ni~~yl~~I~~ 304 (394)
+ ....++.++.+|+.++.. .. ++||+|++...+... ++..+++.+++
T Consensus 85 ----------------~-------~~~~~v~~~~~d~~~~~~---~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~ 137 (299)
T 3g5t_A 85 ----------------P-------DTYKNVSFKISSSDDFKF---LGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYA 137 (299)
T ss_dssp ----------------C--------CCTTEEEEECCTTCCGG---GCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHH
T ss_pred ----------------c-------CCCCceEEEEcCHHhCCc---cccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHH
Confidence 0 001247889999887542 23 789999998766655 88899999999
Q ss_pred hccCCcEEEEe---cCcchhhhhc--------cCCCCCcc-cc-CCHHHHHHHHHhCCC
Q 016155 305 ILKDGGVWINL---GPLLYHFADL--------YGQEDEMS-IE-LSLEDVKRVALHYGF 350 (394)
Q Consensus 305 ~LKpGG~wIN~---GPLlyh~~~~--------~g~~~~~~-ie-LS~eEl~~ll~~~GF 350 (394)
+|||||+++-. .|....+... ++...... .. ...+.++++++.+||
T Consensus 138 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 138 NLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp HEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCC
T ss_pred hcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCC
Confidence 99999999741 2221110000 01001111 22 567788999999999
No 88
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.46 E-value=1.3e-12 Score=119.18 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=94.0
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+||| +|.++..+|++ +..|+|+|+|..|+..++..+...
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------------------------- 102 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN-------------------------------- 102 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh--------------------------------
Confidence 56799999999 99999999999 899999999999997766332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC------------------ChhhHHHHHHHHHHhccCC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID------------------TAHNIVEYIEIISRILKDG 309 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlD------------------ta~ni~~yl~~I~~~LKpG 309 (394)
+.++.++.+|+..+.. ...++||+|++.. |.. ....+.++++.+.++||||
T Consensus 103 --------~~~v~~~~~d~~~~~~--~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 172 (230)
T 3evz_A 103 --------NSNVRLVKSNGGIIKG--VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG 172 (230)
T ss_dssp --------TCCCEEEECSSCSSTT--TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE
T ss_pred --------CCCcEEEeCCchhhhh--cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC
Confidence 0036788899654432 2248899999762 211 1122478999999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 310 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 310 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|+++-.-|-. .-..+++.+++++.||++...+
T Consensus 173 G~l~~~~~~~---------------~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 173 GKVALYLPDK---------------EKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEEEEEEESC---------------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEeccc---------------HhHHHHHHHHHHHcCCceEEEE
Confidence 9998532211 1246789999999999887654
No 89
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.45 E-value=8.6e-13 Score=124.44 Aligned_cols=133 Identities=19% Similarity=0.184 Sum_probs=100.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.|...+. ++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..... +
T Consensus 110 ~~~~l~~~~~-----~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~----~--------------- 165 (254)
T 2nxc_A 110 ALKALARHLR-----PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR----N--------------- 165 (254)
T ss_dssp HHHHHHHHCC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH----T---------------
T ss_pred HHHHHHHhcC-----CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH----c---------------
Confidence 5566666543 567999999999999999999999999999999999776632110 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
.+ . +.+..+|+.+... .++||+|+++... +.+..+++.+.++|||||++|-.
T Consensus 166 -------~~-------------~-v~~~~~d~~~~~~----~~~fD~Vv~n~~~---~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 166 -------GV-------------R-PRFLEGSLEAALP----FGPFDLLVANLYA---ELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp -------TC-------------C-CEEEESCHHHHGG----GCCEEEEEEECCH---HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CC-------------c-EEEEECChhhcCc----CCCCCEEEECCcH---HHHHHHHHHHHHHcCCCCEEEEE
Confidence 00 1 5678888876432 3689999986543 34678999999999999999964
Q ss_pred cCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 316 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 316 GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|++ .-..+++++++++.||++++..
T Consensus 218 ~~~----------------~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 218 GIL----------------KDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp EEE----------------GGGHHHHHHHHHHTTCEEEEEE
T ss_pred eec----------------cCCHHHHHHHHHHCCCEEEEEe
Confidence 432 1257899999999999998754
No 90
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.45 E-value=1.3e-12 Score=122.15 Aligned_cols=149 Identities=9% Similarity=0.007 Sum_probs=99.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHH------HHHHHhhhhhccccccccccccccccccCCCCcccCc
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYY------MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 241 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~------ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~ql 241 (394)
++.+|||+|||+|.++..|+++ | ..|+|+|+|.. |+..++..+...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~------------------------- 97 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG------------------------- 97 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-------------------------
Confidence 5679999999999999999998 4 89999999997 886555322100
Q ss_pred cccccCCCCCCCCCCCCceeEEecc-cccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCc--
Q 016155 242 RPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL-- 318 (394)
Q Consensus 242 r~v~iPDv~p~~~~~~~~ls~~~GD-f~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPL-- 318 (394)
....++.+..+| +.... .|...++||+|++...+....+...+++.+.++++|||+++.....
T Consensus 98 -------------~~~~~v~~~~~d~~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 98 -------------PLGDRLTVHFNTNLSDDL-GPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp -------------TTGGGEEEECSCCTTTCC-GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred -------------CCCCceEEEECChhhhcc-CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 011247788887 43321 1234589999998876655555667788888888889999853110
Q ss_pred -----ch----------hhhhc-cCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 319 -----LY----------HFADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 319 -----ly----------h~~~~-~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
.+ .+... ..........++.+++.++++++||++++...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 164 PTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred CCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 00 01000 011111123579999999999999999987644
No 91
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.45 E-value=1.1e-13 Score=128.72 Aligned_cols=171 Identities=11% Similarity=0.046 Sum_probs=97.6
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCC-HHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISH--LGFISQGNEFS-YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~--~Gf~v~G~D~S-~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..||+ .|..|+|+|+| ..||..|.+....+.+. .
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-----------------------~---- 76 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG-----------------------G---- 76 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT-----------------------C----
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc-----------------------C----
Confidence 567999999999999999994 57789999999 88876553221111100 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-----hhhHHHHHHHHHHhccCCcEEEEecCcchhh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHNIVEYIEIISRILKDGGVWINLGPLLYHF 322 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt-----a~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~ 322 (394)
-.++.+..+|+.++.. ...+.+|+|...|.... ..+..++|++++++|||||+++-.-.+--++
T Consensus 77 ---------~~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~ 145 (225)
T 3p2e_A 77 ---------LSNVVFVIAAAESLPF--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY 145 (225)
T ss_dssp ---------CSSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--
T ss_pred ---------CCCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 1247889999887621 11244555555442211 0112468999999999999998511111111
Q ss_pred hhc---cCCCCCccc-cCCHHHHHHHHHhCCCEEEEEeeccccCCCC----cccccccccceEEE
Q 016155 323 ADL---YGQEDEMSI-ELSLEDVKRVALHYGFEFEKEKTIETTYTTN----PRSMMQNRYFTAFW 379 (394)
Q Consensus 323 ~~~---~g~~~~~~i-eLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d----~~sm~~~~Y~~~f~ 379 (394)
... .+..+...- .+..+|+.+++.++||+++..+.....|... -.......|...|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~ 210 (225)
T 3p2e_A 146 EEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKELDNEYVKQFNSLWAKRLAFGRKRSFF 210 (225)
T ss_dssp ------------CCHHHHHSHHHHHHHHHHTCEEEEEEEECHHHHTTCCSHHHHHHHHSSCCCEE
T ss_pred hhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeecCHHHHHHHHHHHhcccCccchhHHH
Confidence 110 000110000 1122459999999999999866444444322 22233345555555
No 92
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.45 E-value=1.3e-12 Score=125.86 Aligned_cols=143 Identities=13% Similarity=0.135 Sum_probs=100.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|+++ +..++|+|+| .|+..++-.+...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-------------------------------- 211 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-------------------------------- 211 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--------------------------------
Confidence 5679999999999999999998 7899999999 9997665322100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH----- 321 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN~GPLlyh----- 321 (394)
...+++.+..+|+.+... .+.||+|+....+... ++..++++.++++|||||+++-..+..-.
T Consensus 212 ------~~~~~v~~~~~d~~~~~~----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 281 (335)
T 2r3s_A 212 ------GVASRYHTIAGSAFEVDY----GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP 281 (335)
T ss_dssp ------TCGGGEEEEESCTTTSCC----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS
T ss_pred ------CCCcceEEEecccccCCC----CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc
Confidence 011247899999987522 2349999987655433 56789999999999999988754332110
Q ss_pred -hhhccC----CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 -FADLYG----QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 -~~~~~g----~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+....+ ........++.+|++++++++||++++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 282 PDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp HHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred hHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 000000 00001346799999999999999998865
No 93
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.45 E-value=2.1e-12 Score=121.98 Aligned_cols=175 Identities=14% Similarity=0.144 Sum_probs=110.7
Q ss_pred hHHHHHHHHHHhhcCcccCh----hHHhhch-HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEE
Q 016155 127 VDKVRCIIRNIVRDWAAEGK----TERDQCY-KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGN 199 (394)
Q Consensus 127 ~~kv~~~L~q~~RDWS~eg~----~ER~~~y-~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~ 199 (394)
.+++. .+.++...|..... .+.+..| ..+++.+.-..+ ....++.+|||+|||+|.++..||.. +..|+|+
T Consensus 33 ~~~~~-~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~-~~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~v 110 (249)
T 3g89_A 33 LEAFS-RLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL-PLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVLV 110 (249)
T ss_dssp HHHHH-HHHHHHHHC----------CHHHHHHHHHHHHHGGGGS-SCCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEE
T ss_pred HHHHH-HHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcc-cccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEE
Confidence 34443 56666777865211 1111122 234444433222 11225679999999999999999987 6799999
Q ss_pred eCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCC
Q 016155 200 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGA 279 (394)
Q Consensus 200 D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~ 279 (394)
|+|..|+..++...... .. .++.++.+|+.++...+...++
T Consensus 111 D~s~~~~~~a~~~~~~~--------------------------------------~l-~~v~~~~~d~~~~~~~~~~~~~ 151 (249)
T 3g89_A 111 DATRKKVAFVERAIEVL--------------------------------------GL-KGARALWGRAEVLAREAGHREA 151 (249)
T ss_dssp ESCHHHHHHHHHHHHHH--------------------------------------TC-SSEEEEECCHHHHTTSTTTTTC
T ss_pred ECCHHHHHHHHHHHHHh--------------------------------------CC-CceEEEECcHHHhhcccccCCC
Confidence 99999998776432210 00 1378899998876421112478
Q ss_pred ccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 280 WDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 280 fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN-~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
||+|++..+ .++..+++.+.++|||||+++- .|+. ..-..+++...+++.||++++....
T Consensus 152 fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~---------------~~~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 152 YARAVARAV----APLCVLSELLLPFLEVGGAAVAMKGPR---------------VEEELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSC---------------CHHHHTTHHHHHHHHTEEEEEEEEE
T ss_pred ceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCC---------------cHHHHHHHHHHHHHcCCeEEEEEEe
Confidence 999998654 3467899999999999999985 2321 0112345677788899999886544
Q ss_pred ccc
Q 016155 359 ETT 361 (394)
Q Consensus 359 ~~~ 361 (394)
..+
T Consensus 213 ~~p 215 (249)
T 3g89_A 213 QLP 215 (249)
T ss_dssp ECT
T ss_pred eCC
Confidence 333
No 94
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=8.7e-13 Score=118.62 Aligned_cols=136 Identities=17% Similarity=0.106 Sum_probs=97.1
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
.+.|.+..+ ++.+|||+|||+|+++..| |+ .|+|+|+|..|+..++...
T Consensus 27 ~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---------------------- 76 (211)
T 2gs9_A 27 ERALKGLLP-----PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---------------------- 76 (211)
T ss_dssp HHHHHTTCC-----CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----------------------
T ss_pred HHHHHHhcC-----CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----------------------
Confidence 344555543 4679999999999999888 88 9999999999986554110
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
.++.++.+|+.++. ...++||+|++...+...++..+.+++++++|||||++|-.
T Consensus 77 ----------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 77 ----------------------PEATWVRAWGEALP---FPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp ----------------------TTSEEECCCTTSCC---SCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------------CCcEEEEcccccCC---CCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 12567788887653 34678999999888877778899999999999999999864
Q ss_pred cCcc---hh--hhh--ccCCCC-CccccCCHHHHHHHHHhCC
Q 016155 316 GPLL---YH--FAD--LYGQED-EMSIELSLEDVKRVALHYG 349 (394)
Q Consensus 316 GPLl---yh--~~~--~~g~~~-~~~ieLS~eEl~~ll~~~G 349 (394)
.|.. |. +.. ..+... .....+|.++++++++ |
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 132 VLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred ecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 3321 11 000 011111 1123579999999997 8
No 95
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=5.8e-12 Score=115.80 Aligned_cols=131 Identities=14% Similarity=0.010 Sum_probs=85.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+.... +.+.+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~---~~a~~~----------------------------- 104 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL---ELVRER----------------------------- 104 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH---HHHHHC-----------------------------
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH---HHHhcC-----------------------------
Confidence 56799999999999999999874 68999999999873221 111100
Q ss_pred CCCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~-~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
.++.++.+|+.+... .+. .++||+|++.. .+ ......++++++++|||||+++-. +.-...
T Consensus 105 ---------~~v~~~~~d~~~~~~~~~~-~~~fD~V~~~~-~~-~~~~~~~l~~~~r~LkpgG~l~i~----~~~~~~-- 166 (210)
T 1nt2_A 105 ---------NNIIPLLFDASKPWKYSGI-VEKVDLIYQDI-AQ-KNQIEILKANAEFFLKEKGEVVIM----VKARSI-- 166 (210)
T ss_dssp ---------SSEEEECSCTTCGGGTTTT-CCCEEEEEECC-CS-TTHHHHHHHHHHHHEEEEEEEEEE----EEHHHH--
T ss_pred ---------CCeEEEEcCCCCchhhccc-ccceeEEEEec-cC-hhHHHHHHHHHHHHhCCCCEEEEE----EecCCc--
Confidence 124556677765311 112 37899998763 22 233445699999999999999853 111100
Q ss_pred CCCCccccCCHHHHH--H--HHHhCCCEEEEEee
Q 016155 328 QEDEMSIELSLEDVK--R--VALHYGFEFEKEKT 357 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~--~--ll~~~GF~ii~e~~ 357 (394)
....+.+++. + .+++. |++++...
T Consensus 167 -----~~~~~~~~~~~~~~~~l~~~-f~~~~~~~ 194 (210)
T 1nt2_A 167 -----DSTAEPEEVFKSVLKEMEGD-FKIVKHGS 194 (210)
T ss_dssp -----CTTSCHHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred -----cccCCHHHHHHHHHHHHHhh-cEEeeeec
Confidence 1234556653 2 26777 99998764
No 96
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.43 E-value=2.1e-12 Score=114.25 Aligned_cols=116 Identities=13% Similarity=0.051 Sum_probs=88.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|+++| .|+|+|+|..|+..
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~------------------------------------------ 59 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES------------------------------------------ 59 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT------------------------------------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc------------------------------------------
Confidence 45699999999999999999999 99999999999831
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC--------ChhhHHHHHHHHHHhccCCcEEEEecCcchh
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWINLGPLLYH 321 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlD--------ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh 321 (394)
..++.++.+|+.+.. ..++||+|++.. |.. ...+..+.++.+.+.| |||+++-..+-
T Consensus 60 ------~~~~~~~~~d~~~~~----~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~--- 125 (170)
T 3q87_B 60 ------HRGGNLVRADLLCSI----NQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIE--- 125 (170)
T ss_dssp ------CSSSCEEECSTTTTB----CGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEG---
T ss_pred ------ccCCeEEECChhhhc----ccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEec---
Confidence 012567889988733 248899999874 321 1223457889999999 99999853210
Q ss_pred hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 ~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.-..+++.+++++.||+.+...
T Consensus 126 -------------~~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 126 -------------ANRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp -------------GGCHHHHHHHHHHTTCEEEEEE
T ss_pred -------------CCCHHHHHHHHHHCCCcEEEEE
Confidence 1267899999999999988744
No 97
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.42 E-value=1.3e-12 Score=123.83 Aligned_cols=123 Identities=15% Similarity=0.016 Sum_probs=92.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+... +
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----------------------------~- 159 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF-----------------------------Y- 159 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT-----------------------------S-
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc-----------------------------C-
Confidence 5679999999999999999998 789999999999997665322100 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
...++.+..+|+.+.. ..++||+|++ ..++..++++.+.++|||||+++-..|..
T Consensus 160 --------g~~~v~~~~~d~~~~~----~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~-------- 214 (275)
T 1yb2_A 160 --------DIGNVRTSRSDIADFI----SDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNF-------- 214 (275)
T ss_dssp --------CCTTEEEECSCTTTCC----CSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSH--------
T ss_pred --------CCCcEEEEECchhccC----cCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCH--------
Confidence 0023788899988732 2478999987 23345688999999999999998644321
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-..+++.+.+++.||+.++..
T Consensus 215 --------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 215 --------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp --------HHHHHHHHHSGGGTEEEEEEE
T ss_pred --------HHHHHHHHHHHHCCCeEEEEE
Confidence 134677888889999988743
No 98
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.41 E-value=1.6e-12 Score=120.71 Aligned_cols=138 Identities=14% Similarity=0.077 Sum_probs=100.5
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 228 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi 228 (394)
.|+..+..+...+.. .++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+...
T Consensus 77 ~~~~~~~~i~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------ 141 (255)
T 3mb5_A 77 VHPKDAALIVAYAGI---SPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA------------ 141 (255)
T ss_dssp CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH------------
T ss_pred ccHhHHHHHHHhhCC---CCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc------------
Confidence 345555566555542 25779999999999999999999 789999999999997766332110
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 016155 229 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 308 (394)
Q Consensus 229 ~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKp 308 (394)
...+++.+..+|+.+.. ..++||+|+.. .++..++++.+.++|||
T Consensus 142 --------------------------~~~~~v~~~~~d~~~~~----~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 142 --------------------------GFDDRVTIKLKDIYEGI----EEENVDHVILD-----LPQPERVVEHAAKALKP 186 (255)
T ss_dssp --------------------------TCTTTEEEECSCGGGCC----CCCSEEEEEEC-----SSCGGGGHHHHHHHEEE
T ss_pred --------------------------CCCCceEEEECchhhcc----CCCCcCEEEEC-----CCCHHHHHHHHHHHcCC
Confidence 01123788999998753 25789999862 23456789999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCC--CEEEEE
Q 016155 309 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG--FEFEKE 355 (394)
Q Consensus 309 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~G--F~ii~e 355 (394)
||+++-+.|.. -..+++.+.+++.| |..++.
T Consensus 187 gG~l~~~~~~~----------------~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 187 GGFFVAYTPCS----------------NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEEEEEEESSH----------------HHHHHHHHHHHHTGGGBSCCEE
T ss_pred CCEEEEEECCH----------------HHHHHHHHHHHHcCCCccccEE
Confidence 99999654421 13567888899999 987763
No 99
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.41 E-value=1.3e-12 Score=130.47 Aligned_cols=112 Identities=16% Similarity=0.126 Sum_probs=85.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+.+.|.+..+. .++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..++..++..
T Consensus 51 ~~~~i~~~~~~---~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~------------------ 108 (376)
T 3r0q_C 51 YFNAVFQNKHH---FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN------------------ 108 (376)
T ss_dssp HHHHHHTTTTT---TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT------------------
T ss_pred HHHHHHhcccc---CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc------------------
Confidence 44555444322 2577999999999999999999999 99999999 9997666433210
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCcE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---fFlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
...+++.++.+|+.++.. .++||+|++. +|+.....+..+++.++++|||||+
T Consensus 109 --------------------~~~~~v~~~~~d~~~~~~----~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~ 164 (376)
T 3r0q_C 109 --------------------NLDHIVEVIEGSVEDISL----PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGV 164 (376)
T ss_dssp --------------------TCTTTEEEEESCGGGCCC----SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEE
T ss_pred --------------------CCCCeEEEEECchhhcCc----CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeE
Confidence 011347899999988643 2789999984 4677667788899999999999999
Q ss_pred EE
Q 016155 312 WI 313 (394)
Q Consensus 312 wI 313 (394)
+|
T Consensus 165 li 166 (376)
T 3r0q_C 165 MY 166 (376)
T ss_dssp EE
T ss_pred EE
Confidence 98
No 100
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.40 E-value=9.2e-12 Score=114.71 Aligned_cols=135 Identities=16% Similarity=0.080 Sum_probs=90.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..++-.. ..
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~---~~------------------------------ 120 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDAC---AE------------------------------ 120 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHT---TT------------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHh---hc------------------------------
Confidence 5679999999999999999998 5 68999999999996554211 00
Q ss_pred CCCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~-~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
..++.++.+|+.+... .+.. ++||+|+.. +........+++.+.++|||||+++-. +.......
T Consensus 121 --------~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~----~~~~~~~~ 185 (230)
T 1fbn_A 121 --------RENIIPILGDANKPQEYANIV-EKVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIA----IKARSIDV 185 (230)
T ss_dssp --------CTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCS
T ss_pred --------CCCeEEEECCCCCcccccccC-ccEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEE----EecCCCCC
Confidence 0236778888876210 1122 689999822 222323467899999999999999853 11111100
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..+ .-.+..+++. ++++.||++++..
T Consensus 186 ~~~--~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 186 TKD--PKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp SSC--HHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred CCC--HHHhhHHHHH-HHHHCCCEEEEEE
Confidence 111 1134558888 8889999988755
No 101
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.40 E-value=5.7e-12 Score=112.92 Aligned_cols=118 Identities=12% Similarity=0.105 Sum_probs=88.6
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
+.+|||+|||+|.++..|+.. +..|+|+|+|..|+..++..+...
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------------- 112 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL--------------------------------- 112 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---------------------------------
Confidence 569999999999999999987 789999999999997666332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe-cCcchhhhhccCC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYGQ 328 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~-GPLlyh~~~~~g~ 328 (394)
. ..++.+..+|+.++.. .++||+|++..+ .++..+++.+.++|||||+++-. |+
T Consensus 113 -----~-~~~v~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~----------- 167 (207)
T 1jsx_A 113 -----K-LENIEPVQSRVEEFPS----EPPFDGVISRAF----ASLNDMVSWCHHLPGEQGRFYALKGQ----------- 167 (207)
T ss_dssp -----T-CSSEEEEECCTTTSCC----CSCEEEEECSCS----SSHHHHHHHHTTSEEEEEEEEEEESS-----------
T ss_pred -----C-CCCeEEEecchhhCCc----cCCcCEEEEecc----CCHHHHHHHHHHhcCCCcEEEEEeCC-----------
Confidence 0 0126788999887532 478999986543 45678999999999999999852 21
Q ss_pred CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 329 EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 329 ~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
...+++.+++. ||++++..
T Consensus 168 -------~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 168 -------MPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp -------CCHHHHHTSCT--TEEEEEEE
T ss_pred -------CchHHHHHHhc--CCceeeee
Confidence 24567777664 99988754
No 102
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.40 E-value=1e-11 Score=113.44 Aligned_cols=136 Identities=18% Similarity=0.107 Sum_probs=90.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..+.-.. .+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~---~~----------------------------- 120 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIV---EE----------------------------- 120 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH---SS-----------------------------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHH---hc-----------------------------
Confidence 5679999999999999999987 3 69999999999985443211 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
..++.++.+|+.+........++||+|++... .......+++.++++|||||+++-. +.......
T Consensus 121 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~~~~~ 185 (227)
T 1g8a_A 121 ---------RRNIVPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA----VKSRSIDV 185 (227)
T ss_dssp ---------CTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCT
T ss_pred ---------cCCCEEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE----EecCCCCC
Confidence 02367888998773210112358999996543 2222345599999999999999853 21111100
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
..+ .-.+..+++..+ .+. |++++...
T Consensus 186 ~~~--~~~~~~~~l~~l-~~~-f~~~~~~~ 211 (227)
T 1g8a_A 186 TKE--PEQVFREVEREL-SEY-FEVIERLN 211 (227)
T ss_dssp TSC--HHHHHHHHHHHH-HTT-SEEEEEEE
T ss_pred CCC--hhhhhHHHHHHH-Hhh-ceeeeEec
Confidence 111 125667888888 677 99987654
No 103
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=7.9e-12 Score=121.83 Aligned_cols=143 Identities=12% Similarity=0.063 Sum_probs=100.0
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
..+|||+|||+|.++..|+++ +..++++|+ ..|+..++..+...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------------------------------- 225 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--------------------------------- 225 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc---------------------------------
Confidence 679999999999999999998 678999999 77886665322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcc--------
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL-------- 319 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wIN~GPLl-------- 319 (394)
...+++.+..+||.+... ...+.||+|+....+. ..++....++.++++|||||++|-..+..
T Consensus 226 -----~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~ 298 (352)
T 3mcz_A 226 -----DLGGRVEFFEKNLLDARN--FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA 298 (352)
T ss_dssp -----TCGGGEEEEECCTTCGGG--GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH
T ss_pred -----CCCCceEEEeCCcccCcc--cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc
Confidence 012348899999987531 0135699999887654 33456899999999999999998543211
Q ss_pred hh-hhhc-cCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 320 YH-FADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 320 yh-~~~~-~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
+. +.+. .........+.+.+|++++++++||++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 299 LSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp HHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 00 0000 000000134689999999999999999974
No 104
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.40 E-value=8.6e-12 Score=122.45 Aligned_cols=154 Identities=12% Similarity=0.062 Sum_probs=104.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
.+..|.+.++. .+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 178 ~~~~l~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----------------- 236 (359)
T 1x19_A 178 AIQLLLEEAKL---DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK----------------- 236 (359)
T ss_dssp HHHHHHHHCCC---TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-----------------
T ss_pred hHHHHHHhcCC---CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc-----------------
Confidence 34455555542 25679999999999999999998 679999999 99987665322100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGV 311 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~ 311 (394)
...+++.+..+||.+... ..+|+|+....+...++ ..+.|++++++|||||+
T Consensus 237 ---------------------~~~~~v~~~~~d~~~~~~-----~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~ 290 (359)
T 1x19_A 237 ---------------------GVADRMRGIAVDIYKESY-----PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGR 290 (359)
T ss_dssp ---------------------TCTTTEEEEECCTTTSCC-----CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred ---------------------CCCCCEEEEeCccccCCC-----CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 011247899999987521 22399998876654433 78999999999999999
Q ss_pred EEEecCcc-------hh-hhhc---cCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 312 WINLGPLL-------YH-FADL---YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 312 wIN~GPLl-------yh-~~~~---~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+|-+.+.. +. +... .+........++.+|++++++++||++++..
T Consensus 291 l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~ 346 (359)
T 1x19_A 291 LLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMV 346 (359)
T ss_dssp EEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEE
T ss_pred EEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEE
Confidence 97432111 00 0000 0100000112899999999999999998865
No 105
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.40 E-value=3.3e-12 Score=126.25 Aligned_cols=145 Identities=14% Similarity=0.166 Sum_probs=101.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
...+|||+|||+|.++..|+++ +..++++|+ ..|+..++-.+..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~--------------------------------- 224 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG--------------------------------- 224 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT---------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh---------------------------------
Confidence 4579999999999999999995 678999999 9998766522110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYH----- 321 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh----- 321 (394)
.....++++..+||.+... |. .+.||+|+....|. ..++....|++++++|||||++|-..+..-.
T Consensus 225 -----~~~~~~v~~~~~d~~~~~~-~~-p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 297 (363)
T 3dp7_A 225 -----LSGSERIHGHGANLLDRDV-PF-PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYET 297 (363)
T ss_dssp -----CTTGGGEEEEECCCCSSSC-CC-CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHH
T ss_pred -----cCcccceEEEEccccccCC-CC-CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccc
Confidence 0112358999999987420 11 26899999887765 4455778999999999999999854322100
Q ss_pred --h----hhc-c-CCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 --F----ADL-Y-GQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 --~----~~~-~-g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+ ... . ........+.+.+|++++++++||++++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 298 ASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred hhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 0 000 0 000111346799999999999999998754
No 106
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.39 E-value=2.2e-12 Score=114.88 Aligned_cols=115 Identities=17% Similarity=0.106 Sum_probs=84.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+++.|....+. ++.+|||+|||+|.++.+++.+|. .|+|+|+|..|+..++..+...
T Consensus 33 l~~~l~~~~~~----~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 90 (189)
T 3p9n_A 33 LFNIVTARRDL----TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL------------------ 90 (189)
T ss_dssp HHHHHHHHSCC----TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH------------------
T ss_pred HHHHHHhccCC----CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc------------------
Confidence 44555544321 567999999999999999999987 6999999999997766332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHHHHHHH--hccCCcE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISR--ILKDGGV 311 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlDta~ni~~yl~~I~~--~LKpGG~ 311 (394)
.. .++.++.+|+.++.. ....++||+|++.. |....+++.+.++.+.+ +|||||+
T Consensus 91 --------------------~~-~~v~~~~~d~~~~~~-~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~ 148 (189)
T 3p9n_A 91 --------------------GL-SGATLRRGAVAAVVA-AGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTV 148 (189)
T ss_dssp --------------------TC-SCEEEEESCHHHHHH-HCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCE
T ss_pred --------------------CC-CceEEEEccHHHHHh-hccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeE
Confidence 00 237889999987632 01257899999874 33334678899999999 9999999
Q ss_pred EEE
Q 016155 312 WIN 314 (394)
Q Consensus 312 wIN 314 (394)
++-
T Consensus 149 l~~ 151 (189)
T 3p9n_A 149 AVV 151 (189)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 107
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.39 E-value=1.7e-12 Score=119.91 Aligned_cols=137 Identities=17% Similarity=0.117 Sum_probs=98.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 229 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~ 229 (394)
|+..+..+.+.+.. .++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+....
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~------------ 145 (258)
T 2pwy_A 81 YPKDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFW------------ 145 (258)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC------------
T ss_pred cchHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc------------
Confidence 44445555555442 25679999999999999999998 6899999999999976663321100
Q ss_pred cccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 016155 230 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 309 (394)
Q Consensus 230 ~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpG 309 (394)
. ..++.+..+|+.+.. ...+.||+|+.. .++..++++.+.++||||
T Consensus 146 -------------g-------------~~~v~~~~~d~~~~~---~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~g 191 (258)
T 2pwy_A 146 -------------Q-------------VENVRFHLGKLEEAE---LEEAAYDGVALD-----LMEPWKVLEKAALALKPD 191 (258)
T ss_dssp -------------C-------------CCCEEEEESCGGGCC---CCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE
T ss_pred -------------C-------------CCCEEEEECchhhcC---CCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCC
Confidence 0 023778899988762 224789999873 234457899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 310 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 310 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
|+++-+.|.. -..+++.+.+++.||+.++
T Consensus 192 G~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 192 RFLVAYLPNI----------------TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEEESCH----------------HHHHHHHHHHTTTTEEEEE
T ss_pred CEEEEEeCCH----------------HHHHHHHHHHHHCCCceEE
Confidence 9999654421 1245777788889999876
No 108
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.39 E-value=1.7e-12 Score=127.82 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=80.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..++-.+.. +
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~----~----------------------------- 109 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRL----N----------------------------- 109 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHH----c-----------------------------
Confidence 567999999999999999999997 899999996 98766533211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
....++.++.+|+.++.. ..++||+|++.. ++....++..+++.+.++|||||++|
T Consensus 110 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 110 -----KLEDTITLIKGKIEEVHL---PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEEeeHHHhcC---CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 011347889999988632 357899999764 67777778899999999999999998
No 109
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.38 E-value=1.2e-11 Score=116.21 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=97.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..||+++. .|+|+|+|..|+..++..+.. +
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~----~----------------------------- 95 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAY----N----------------------------- 95 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHH----C-----------------------------
Confidence 467999999999999999999987 899999999999776632211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC------------------ChhhHHHHHHHHHHhccCC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID------------------TAHNIVEYIEIISRILKDG 309 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD------------------ta~ni~~yl~~I~~~LKpG 309 (394)
...+++.++.+|+.++.. ....++||+|++. ||.. ...++.++++.+.++||||
T Consensus 96 -----~~~~~v~~~~~D~~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 96 -----QLEDQIEIIEYDLKKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp -----TCTTTEEEECSCGGGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE
T ss_pred -----CCcccEEEEECcHHHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC
Confidence 012347889999988642 1235899999986 3322 0134668999999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeec
Q 016155 310 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 358 (394)
Q Consensus 310 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i 358 (394)
|+++-+-| .-..+++..++.+.||.......+
T Consensus 170 G~l~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 170 GKANFVHR-----------------PERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp EEEEEEEC-----------------TTTHHHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEc-----------------HHHHHHHHHHHHHCCCceEEEEEe
Confidence 99985311 125678999999999998876544
No 110
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.38 E-value=7.3e-12 Score=119.85 Aligned_cols=136 Identities=10% Similarity=0.010 Sum_probs=92.8
Q ss_pred CCeEEEecCCC---ChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCcccccc
Q 016155 172 PPACLVPGAGL---GRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 246 (394)
Q Consensus 172 ~~~VLvpGCGl---GRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~i 246 (394)
..+|||+|||+ |.++..+++. |..|+|+|+|..||..++-.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------------------------------- 126 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------------------------------- 126 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------------------------------
Confidence 46999999999 9987666654 78999999999999877633210
Q ss_pred CCCCCCCCCCCCceeEEecccccccC---C-----CCCCCCccEEEEecc---cCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 247 PDIHPASAGITEGFSMCGGDFVEVYS---D-----PSQVGAWDAVVTCFF---IDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 247 PDv~p~~~~~~~~ls~~~GDf~ely~---~-----~~~~~~fD~VvT~fF---lDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
..++.++.+|+.+... . ....++||+|+..+. +... .+...|++++++|||||+++..
T Consensus 127 ----------~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 127 ----------DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp ----------CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEE
T ss_pred ----------CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEE
Confidence 1237889999876310 0 001247999997753 4433 4889999999999999999852
Q ss_pred --cCc---ch----h-hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 316 --GPL---LY----H-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 316 --GPL---ly----h-~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
.+- .. . |.. .+ .+ ....+.+|+.+++ .||++++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~s~~ei~~~l--~G~~l~~~ 239 (274)
T 2qe6_A 196 SLVDTGLPAQQKLARITRE-NL-GE--GWARTPEEIERQF--GDFELVEP 239 (274)
T ss_dssp EEBCSSCHHHHHHHHHHHH-HH-SC--CCCBCHHHHHHTT--TTCEECTT
T ss_pred EecCcchHHHHHHHHHHHh-cC-CC--CccCCHHHHHHHh--CCCeEccC
Confidence 210 00 0 111 01 11 2347999999999 59998873
No 111
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.7e-12 Score=128.20 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=80.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..++......
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~--------------------------------- 111 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKAN--------------------------------- 111 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHc---------------------------------
Confidence 467999999999999999999998 89999999 5987666433210
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...+++.++.+|+.++. ...++||+|++.. ++.....+..+++.+.++|||||++|
T Consensus 112 -----~~~~~v~~~~~d~~~~~---~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 112 -----KLDHVVTIIKGKVEEVE---LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp -----TCTTTEEEEESCTTTCC---CSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEECcHHHcc---CCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 01124789999998873 2358999999853 46666778899999999999999997
No 112
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.37 E-value=1.6e-11 Score=113.00 Aligned_cols=135 Identities=10% Similarity=-0.016 Sum_probs=87.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..+. +.+..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~---~~a~~----------------------------- 124 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI---NLAKK----------------------------- 124 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH---HHHHH-----------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH---HHhhc-----------------------------
Confidence 5679999999999999999987 378999999998864322 11110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe-cCcchhhhhcc
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLY 326 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~-GPLlyh~~~~~ 326 (394)
..++.++.+|+.+....+...++||+|++... .......+++.+.++|||||+++-. .+ -....
T Consensus 125 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~~~~----~~~~~ 189 (233)
T 2ipx_A 125 ---------RTNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVISIKA----NCIDS 189 (233)
T ss_dssp ---------CTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEEH----HHHCS
T ss_pred ---------cCCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEEEcc----ccccc
Confidence 01367888998773211223578999997543 2233456788999999999999851 11 00010
Q ss_pred CCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 327 GQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 327 g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+ .+ ....++ ++ .+++++.||++++..
T Consensus 190 ~-~~-~~~~~~-~~-~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 190 T-AS-AEAVFA-SE-VKKMQQENMKPQEQL 215 (233)
T ss_dssp S-SC-HHHHHH-HH-HHTTGGGTEEEEEEE
T ss_pred C-CC-HHHHHH-HH-HHHHHHCCCceEEEE
Confidence 0 11 000122 33 478889999998754
No 113
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.37 E-value=7e-12 Score=109.60 Aligned_cols=115 Identities=13% Similarity=0.077 Sum_probs=85.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
..+.|.+.++.. ++.+|||+|||+|.++..+++.|..|+|+|+|..|+..++..+...
T Consensus 40 ~~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------------- 97 (194)
T 1dus_A 40 GTKILVENVVVD---KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN------------------- 97 (194)
T ss_dssp HHHHHHHHCCCC---TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHcccC---CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc-------------------
Confidence 444455555432 5679999999999999999999999999999999997666332110
Q ss_pred CcccCccccccCCCCCCCCCCCC-ceeEEecccccccCCCCCCCCccEEEEecccCC-hhhHHHHHHHHHHhccCCcEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITE-GFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-AHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~-~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt-a~ni~~yl~~I~~~LKpGG~wI 313 (394)
. ..+ ++.+..+|+.+.. ..++||+|++..-+.. ..++..+++.+.++|||||+++
T Consensus 98 -------~------------~~~~~~~~~~~d~~~~~----~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 154 (194)
T 1dus_A 98 -------N------------LDNYDIRVVHSDLYENV----KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIW 154 (194)
T ss_dssp -------T------------CTTSCEEEEECSTTTTC----TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------C------------CCccceEEEECchhccc----ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEE
Confidence 0 001 2678889987743 2578999998754333 5667899999999999999998
Q ss_pred Ee
Q 016155 314 NL 315 (394)
Q Consensus 314 N~ 315 (394)
-.
T Consensus 155 ~~ 156 (194)
T 1dus_A 155 VV 156 (194)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 114
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.36 E-value=3.7e-12 Score=124.67 Aligned_cols=101 Identities=16% Similarity=0.251 Sum_probs=79.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..++-.+.. +
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~----~----------------------------- 83 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVEL----N----------------------------- 83 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHH----c-----------------------------
Confidence 456999999999999999999997 89999999 688766533211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...+++.++.+|+.++.. ..++||+|++. +++.....+..+++.+.++|||||++|
T Consensus 84 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 84 -----GFSDKITLLRGKLEDVHL---PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCCEEEEECchhhccC---CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 011347889999988632 24789999987 456666678899999999999999998
No 115
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=2e-12 Score=124.02 Aligned_cols=98 Identities=16% Similarity=0.068 Sum_probs=71.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|+++..||++|+.|+|+|+|..|+..++-.+.. .
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~----~------------------------------ 90 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALAD----R------------------------------ 90 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSS----S------------------------------
T ss_pred CcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHh----c------------------------------
Confidence 577999999999999999999999999999999999766522110 0
Q ss_pred CCCCCCCCceeEEecccccccC--CCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~--~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
.+.+++.++.. .....++||+|++.+.+. ..+++..+++.+.++| |||+++-
T Consensus 91 -----------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~l 146 (261)
T 3iv6_A 91 -----------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRA 146 (261)
T ss_dssp -----------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEE
T ss_pred -----------cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEE
Confidence 01122222111 001247899999887654 3456888999999999 9999973
No 116
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.36 E-value=2.4e-11 Score=119.21 Aligned_cols=143 Identities=18% Similarity=0.177 Sum_probs=98.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++..+...
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 228 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-------------------------------- 228 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc--------------------------------
Confidence 5679999999999999999998 578999999 99997665322100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecC--cch----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGP--LLY---- 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~wIN~GP--Lly---- 320 (394)
....++.+..+|+.+.. | ..||+|+....+.... ....+++.++++|||||++|-..+ ..-
T Consensus 229 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 297 (374)
T 1qzz_A 229 ------GLADRVTVAEGDFFKPL--P---VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD 297 (374)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------
T ss_pred ------CCCCceEEEeCCCCCcC--C---CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC
Confidence 01134889999997622 2 3499999887654333 345899999999999998875433 210
Q ss_pred -hhhhccCC---CCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 321 -HFADLYGQ---EDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 321 -h~~~~~g~---~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
.+....+. .......++.++++++++++||++++...
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~ 338 (374)
T 1qzz_A 298 RFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERT 338 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEE
T ss_pred cchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 00000000 00002357999999999999999988653
No 117
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.35 E-value=1.8e-11 Score=115.88 Aligned_cols=138 Identities=14% Similarity=0.094 Sum_probs=98.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 229 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~ 229 (394)
|+.-+..+...+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+...
T Consensus 97 ~~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------- 160 (277)
T 1o54_A 97 YPKDSSFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW------------- 160 (277)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-------------
T ss_pred CHHHHHHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-------------
Confidence 34444455554432 25679999999999999999998 579999999999997666322110
Q ss_pred cccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 016155 230 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 309 (394)
Q Consensus 230 ~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpG 309 (394)
....++.+..+|+.+... .+.||+|+.. .++..++++.+.++||||
T Consensus 161 -------------------------~~~~~v~~~~~d~~~~~~----~~~~D~V~~~-----~~~~~~~l~~~~~~L~pg 206 (277)
T 1o54_A 161 -------------------------GLIERVTIKVRDISEGFD----EKDVDALFLD-----VPDPWNYIDKCWEALKGG 206 (277)
T ss_dssp -------------------------TCGGGEEEECCCGGGCCS----CCSEEEEEEC-----CSCGGGTHHHHHHHEEEE
T ss_pred -------------------------CCCCCEEEEECCHHHccc----CCccCEEEEC-----CcCHHHHHHHHHHHcCCC
Confidence 001247788999887632 4689999873 234568899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 310 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 310 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|+++...|.. -..+++.+.+++.||..++..
T Consensus 207 G~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~~~ 237 (277)
T 1o54_A 207 GRFATVCPTT----------------NQVQETLKKLQELPFIRIEVW 237 (277)
T ss_dssp EEEEEEESSH----------------HHHHHHHHHHHHSSEEEEEEE
T ss_pred CEEEEEeCCH----------------HHHHHHHHHHHHCCCceeEEE
Confidence 9999644321 124677788888999987743
No 118
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.35 E-value=1.9e-11 Score=121.07 Aligned_cols=153 Identities=17% Similarity=0.190 Sum_probs=104.3
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
...|.+.++.. +..+|||+|||+|.++..|+++ +..++++|+ ..|+..++-.+...
T Consensus 191 ~~~l~~~~~~~---~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------------------ 248 (369)
T 3gwz_A 191 AGQVAAAYDFS---GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR------------------ 248 (369)
T ss_dssp HHHHHHHSCCT---TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------------------
T ss_pred HHHHHHhCCCc---cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc------------------
Confidence 44455555422 5689999999999999999998 678999999 99987665322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~w 312 (394)
....++.+..+||.+-. | ..||+|+....|.... ...+.|+.++++|||||++
T Consensus 249 --------------------~l~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 249 --------------------GLADRCEILPGDFFETI--P---DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRL 303 (369)
T ss_dssp --------------------TCTTTEEEEECCTTTCC--C---SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEE
T ss_pred --------------------CcCCceEEeccCCCCCC--C---CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 11235899999998422 2 3799999876554333 3458999999999999999
Q ss_pred EEecCcchh-------hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 313 INLGPLLYH-------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 313 IN~GPLlyh-------~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|-..++.-. +.+..-.......+.+.+|++++++++||++++..
T Consensus 304 ~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 304 LVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp EEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred EEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 854322100 00000000001246899999999999999999865
No 119
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.35 E-value=9.7e-12 Score=112.97 Aligned_cols=129 Identities=13% Similarity=0.101 Sum_probs=91.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..++..+... .
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~----- 89 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--------------------------G----- 89 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------------------C-----
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--------------------------C-----
Confidence 4678999999999999999998 579999999999997665322110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh-h--------hHHHHHHHHHHhccCCcEEEEecCcc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-H--------NIVEYIEIISRILKDGGVWINLGPLL 319 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta-~--------ni~~yl~~I~~~LKpGG~wIN~GPLl 319 (394)
. .++.++.+|+.++.. ....++||+|++.|- +.. . ....+++.+.++|||||+++-..+.
T Consensus 90 -------~-~~v~~~~~d~~~~~~-~~~~~~~D~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 158 (214)
T 1yzh_A 90 -------V-PNIKLLWVDGSDLTD-YFEDGEIDRLYLNFS-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN- 158 (214)
T ss_dssp -------C-SSEEEEECCSSCGGG-TSCTTCCSEEEEESC-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-
T ss_pred -------C-CCEEEEeCCHHHHHh-hcCCCCCCEEEEECC-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-
Confidence 0 247889999887531 123578999998753 211 0 1257899999999999998742110
Q ss_pred hhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 320 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 320 yh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
. . -.+++.+++.+.||+++...
T Consensus 159 ---~---------~---~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 159 ---R---------G---LFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp ---H---------H---HHHHHHHHHHHHTCEEEEEE
T ss_pred ---H---------H---HHHHHHHHHHHCCCeeeecc
Confidence 0 0 23677888888999988754
No 120
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.35 E-value=9.9e-12 Score=113.87 Aligned_cols=128 Identities=13% Similarity=0.131 Sum_probs=89.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..++..+... .
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~--------------------------~----- 86 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS--------------------------E----- 86 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS--------------------------C-----
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc--------------------------C-----
Confidence 4678999999999999999998 789999999999997665322100 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-hh------h--HHHHHHHHHHhccCCcEEEEecCcc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-AH------N--IVEYIEIISRILKDGGVWINLGPLL 319 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt-a~------n--i~~yl~~I~~~LKpGG~wIN~GPLl 319 (394)
-.++.++.+|+.++.. ....++||.|+.+| -+. .. . ...+++.++++|||||+++-..+.
T Consensus 87 --------~~nv~~~~~d~~~l~~-~~~~~~~d~v~~~~-~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~- 155 (213)
T 2fca_A 87 --------AQNVKLLNIDADTLTD-VFEPGEVKRVYLNF-SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN- 155 (213)
T ss_dssp --------CSSEEEECCCGGGHHH-HCCTTSCCEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC-
T ss_pred --------CCCEEEEeCCHHHHHh-hcCcCCcCEEEEEC-CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC-
Confidence 0237889999887531 01257899987654 221 00 0 257899999999999999842110
Q ss_pred hhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 320 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 320 yh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
.--.+++.+++.+.||++...
T Consensus 156 ---------------~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 156 ---------------RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEEEE
T ss_pred ---------------HHHHHHHHHHHHHCCCccccc
Confidence 012356667777889988764
No 121
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.34 E-value=6.9e-12 Score=122.74 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=77.2
Q ss_pred CCCeEEEecCCCChhH-HHHHH-cCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLA-LEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa-~eLA~-~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++ ..+|+ .|..|+|+|+|..|+..|+..+...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------------------------------- 169 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------------------------------- 169 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH--------------------------------
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc--------------------------------
Confidence 6889999999999875 55676 4999999999999998877433210
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
.. .+++++.||+.++. +++||+|+.... .++..++++.++++|||||+++.
T Consensus 170 ------gl-~~v~~v~gDa~~l~-----d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 170 ------GV-DGVNVITGDETVID-----GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp ------TC-CSEEEEESCGGGGG-----GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred ------CC-CCeEEEECchhhCC-----CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEE
Confidence 11 24889999998852 478999987654 45677999999999999999995
No 122
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.34 E-value=5.7e-13 Score=124.97 Aligned_cols=139 Identities=15% Similarity=0.150 Sum_probs=82.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|+++..|+++|. .|+|+|+|..||..+.... .+ ... ..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~---~~---~~~-------------------~~---- 87 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD---ER---VVV-------------------ME---- 87 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC---TT---EEE-------------------EC----
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC---cc---ccc-------------------cc----
Confidence 467999999999999999999996 9999999999985433100 00 000 00
Q ss_pred CCCCCCCCCceeEEe-cccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccC
Q 016155 250 HPASAGITEGFSMCG-GDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 327 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~-GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN-~GPLlyh~~~~~g 327 (394)
..++.+.. +|+... ......||+|+.. +..++++++++|||||+++- +.|..-......+
T Consensus 88 -------~~~~~~~~~~~~~~~---~~d~~~~D~v~~~--------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~ 149 (232)
T 3opn_A 88 -------QFNFRNAVLADFEQG---RPSFTSIDVSFIS--------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVG 149 (232)
T ss_dssp -------SCCGGGCCGGGCCSC---CCSEEEECCSSSC--------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC
T ss_pred -------cceEEEeCHhHcCcC---CCCEEEEEEEhhh--------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhC
Confidence 00111111 232210 0012344544322 25789999999999999985 3443110000011
Q ss_pred --CC--CCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 --QE--DEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 --~~--~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+. +......+.+++.++++++||+++...
T Consensus 150 ~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 150 KNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 00 001123488999999999999998754
No 123
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.34 E-value=8e-12 Score=119.42 Aligned_cols=128 Identities=20% Similarity=0.193 Sum_probs=94.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~-v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|.. |+|+|+|..|+..++..+.. +
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~----n----------------------------- 171 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL----N----------------------------- 171 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 4679999999999999999999985 99999999999766632110 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
...+++.++.+|+.++.. .++||+|+.. ......++++.+.++|||||+++-..... ..
T Consensus 172 -----~~~~~v~~~~~D~~~~~~----~~~fD~Vi~~----~p~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~----- 230 (278)
T 2frn_A 172 -----KVEDRMSAYNMDNRDFPG----ENIADRILMG----YVVRTHEFIPKALSIAKDGAIIHYHNTVP---EK----- 230 (278)
T ss_dssp -----TCTTTEEEECSCTTTCCC----CSCEEEEEEC----CCSSGGGGHHHHHHHEEEEEEEEEEEEEE---GG-----
T ss_pred -----CCCceEEEEECCHHHhcc----cCCccEEEEC----CchhHHHHHHHHHHHCCCCeEEEEEEeec---cc-----
Confidence 011237889999988642 5789999774 33344678999999999999998421110 00
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
....-..+++.+++++.||++..
T Consensus 231 --~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 231 --LMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --GTTTTTHHHHHHHHHHTTCEEEE
T ss_pred --cccccHHHHHHHHHHHcCCeeEE
Confidence 01134678999999999999876
No 124
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=3.1e-12 Score=110.40 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=71.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..+... .
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------- 87 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT--------------------------G------- 87 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------C-------
Confidence 3568999999999999999999999999999999997766322110 0
Q ss_pred CCCCCCCCceeEEecccccccC-CCCCCCCccEEEEe--cccCChhhHHHHHHHHH--HhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTC--FFIDTAHNIVEYIEIIS--RILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~-~~~~~~~fD~VvT~--fFlDta~ni~~yl~~I~--~~LKpGG~wIN 314 (394)
. ++.++.+|+.+... .+...++||+|++. |. ...+ +.++.+. ++|||||+++-
T Consensus 88 -----~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~~~~---~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 88 -----L--GARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-MDLA---ALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp -----C--CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-SCTT---HHHHHHHHHTCEEEEEEEEE
T ss_pred -----C--ceEEEeccHHHHHHhhhccCCceEEEEECCCCc-hhHH---HHHHHHHhhcccCCCcEEEE
Confidence 0 26778889877421 11112479999987 44 3333 4455555 99999999984
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=1.1e-11 Score=110.43 Aligned_cols=104 Identities=11% Similarity=0.089 Sum_probs=78.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..|+++ | -.|+|+|+|..|+..++..+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 70 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL------------------------------- 70 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 5679999999999999999997 2 48999999999997766332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-c--------cCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F--------IDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-F--------lDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.+|+.++.. ...++||+|++.. | +....+..++++.+.++|||||+++-
T Consensus 71 -------~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 71 -------NLIDRVTLIKDGHQNMDK--YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp -------TCGGGEEEECSCGGGGGG--TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCCeEEEECCHHHHhh--hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 011247889999888642 1247899999775 2 23344667899999999999999985
No 126
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.33 E-value=1.3e-11 Score=114.20 Aligned_cols=104 Identities=14% Similarity=0.159 Sum_probs=78.5
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~--~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||+ .+..|+|+|+|..|+..++..+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 118 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY-------------------------------- 118 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 456999999999999999999 5789999999999997776433210
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G 316 (394)
...+++.++.+|+.+.... ...++||+|+.... ..+..++++.+.++|||||++|--.
T Consensus 119 ------~~~~~v~~~~~d~~~~~~~-~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 119 ------HFENQVRIIEGNALEQFEN-VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp ------TCTTTEEEEESCGGGCHHH-HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ------CCCCcEEEEECCHHHHHHh-hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 0113488999999875320 12478999985432 4457789999999999999998533
No 127
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.32 E-value=3.3e-11 Score=114.11 Aligned_cols=135 Identities=20% Similarity=0.211 Sum_probs=98.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
+++.+.+.++ .++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++......
T Consensus 98 l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~----------------- 156 (276)
T 2b3t_A 98 LVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL----------------- 156 (276)
T ss_dssp HHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH-----------------
T ss_pred HHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 5566666554 14679999999999999999976 789999999999997766322110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCC---------------------
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDT--------------------- 291 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlDt--------------------- 291 (394)
. . .++.++.+|+.+... .++||+|++.. |+..
T Consensus 157 ---------~------------~-~~v~~~~~d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~ 210 (276)
T 2b3t_A 157 ---------A------------I-KNIHILQSDWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAA 210 (276)
T ss_dssp ---------T------------C-CSEEEECCSTTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCH
T ss_pred ---------C------------C-CceEEEEcchhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCC
Confidence 0 0 137889999887432 46899999873 3322
Q ss_pred ---hhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 292 ---AHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 292 ---a~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
......+++.+.++|||||+++-.-+ ..+.+++.+++++.||+.++
T Consensus 211 ~~g~~~~~~~l~~~~~~LkpgG~l~~~~~-----------------~~~~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 211 DSGMADIVHIIEQSRNALVSGGFLLLEHG-----------------WQQGEAVRQAFILAGYHDVE 259 (276)
T ss_dssp HHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------------SSCHHHHHHHHHHTTCTTCC
T ss_pred CcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------------chHHHHHHHHHHHCCCcEEE
Confidence 13457789999999999999984210 12578999999999998654
No 128
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.32 E-value=1.6e-11 Score=112.17 Aligned_cols=141 Identities=20% Similarity=0.236 Sum_probs=94.2
Q ss_pred cchHHHHHHHHHHhh--cCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEE
Q 016155 125 ADVDKVRCIIRNIVR--DWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGN 199 (394)
Q Consensus 125 ~d~~kv~~~L~q~~R--DWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~ 199 (394)
.|-+.+...+.++.+ +|...-..+.. .++..+.... ++.+|||+|||+|.++..||+. |..|+|+
T Consensus 20 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~v 89 (221)
T 3u81_A 20 GDPQSVLEAIDTYCTQKEWAMNVGDAKG----QIMDAVIREY------SPSLVLELGAYCGYSAVRMARLLQPGARLLTM 89 (221)
T ss_dssp TCHHHHHHHHHHHHHHHTCGGGCCHHHH----HHHHHHHHHH------CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEE
T ss_pred CCHHHHHHHHHHHhhhcCcCcccCHHHH----HHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE
Confidence 455677778888876 45332222222 2444444432 4569999999999999999984 7899999
Q ss_pred eCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CC--CC
Q 016155 200 EFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DP--SQ 276 (394)
Q Consensus 200 D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~-~~--~~ 276 (394)
|+|..|+..++-.+... ...+++.++.||+.++.. .+ ..
T Consensus 90 D~~~~~~~~a~~~~~~~--------------------------------------~~~~~v~~~~~d~~~~l~~~~~~~~ 131 (221)
T 3u81_A 90 EINPDCAAITQQMLNFA--------------------------------------GLQDKVTILNGASQDLIPQLKKKYD 131 (221)
T ss_dssp ESCHHHHHHHHHHHHHH--------------------------------------TCGGGEEEEESCHHHHGGGTTTTSC
T ss_pred eCChHHHHHHHHHHHHc--------------------------------------CCCCceEEEECCHHHHHHHHHHhcC
Confidence 99999997766332211 011247889999876432 10 11
Q ss_pred CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 277 VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 277 ~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
.++||+|+.........+..++++.+ ++|||||++|-
T Consensus 132 ~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 132 VDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred CCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 26899997654444444455677777 99999999984
No 129
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.32 E-value=3.3e-12 Score=113.69 Aligned_cols=129 Identities=15% Similarity=0.109 Sum_probs=79.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+..
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~--------------------------------- 76 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER--------------------------------- 76 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------------------------------
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 5679999999999999999999 56999999999998654411100
Q ss_pred CCCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEec-ccCC-------------------------hhhHHHHHHH
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCF-FIDT-------------------------AHNIVEYIEI 301 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~f-FlDt-------------------------a~ni~~yl~~ 301 (394)
.+.++.++.+|+.+.... ....++||+|++.. |... ......+++.
T Consensus 77 -------~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (215)
T 4dzr_A 77 -------FGAVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL 149 (215)
T ss_dssp -------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTC
T ss_pred -------hCCceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH
Confidence 000366788888773210 00127899999852 1110 1112678899
Q ss_pred HHHhccCCcE-EEEecCcchhhhhccCCCCCccccCCHHHHHHHHH--hCCCEEEEEe
Q 016155 302 ISRILKDGGV-WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVAL--HYGFEFEKEK 356 (394)
Q Consensus 302 I~~~LKpGG~-wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~--~~GF~ii~e~ 356 (394)
++++|||||+ ++-.-+ .-..+++.+++. +.||..++..
T Consensus 150 ~~~~LkpgG~l~~~~~~-----------------~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 150 PPYVLARGRAGVFLEVG-----------------HNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp CGGGBCSSSEEEEEECT-----------------TSCHHHHHHHTGGGGGGTEECCEE
T ss_pred HHHHhcCCCeEEEEEEC-----------------CccHHHHHHHHHHhhcCCceEEEE
Confidence 9999999999 442111 125678899999 9999776543
No 130
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.31 E-value=5.8e-12 Score=114.26 Aligned_cols=104 Identities=15% Similarity=0.049 Sum_probs=75.3
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 172 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
+.+|||+|||+|.++.+++.+|. .|+|+|+|..|+..++..+... .+ .
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~~-----~ 102 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL--------------------------KC-----S 102 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------TC-----C
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh--------------------------CC-----C
Confidence 46899999999999999988886 8999999999998776332110 00 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCC-ccEEEEecccCChhhHHHHHHHH--HHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGA-WDAVVTCFFIDTAHNIVEYIEII--SRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~-fD~VvT~fFlDta~ni~~yl~~I--~~~LKpGG~wIN 314 (394)
..++.++.+|+.++... ...++ ||+|++..-+. ..+..+.++.+ .++|||||+++-
T Consensus 103 ------~~~v~~~~~d~~~~~~~-~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 103 ------SEQAEVINQSSLDFLKQ-PQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp ------TTTEEEECSCHHHHTTS-CCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ------ccceEEEECCHHHHHHh-hccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEE
Confidence 02478899998875321 12468 99999764222 34566788888 678999999984
No 131
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.31 E-value=4.6e-11 Score=116.77 Aligned_cols=143 Identities=20% Similarity=0.177 Sum_probs=98.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|++++ ..++++|+ ..|+..++..+...
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 229 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-------------------------------- 229 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--------------------------------
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--------------------------------
Confidence 56799999999999999999985 57889999 88987665222100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCc-ch-----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPL-LY----- 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN~GPL-ly----- 320 (394)
....++.++.+|+.+.. | ..||+|+....+... ++..++++.++++|||||++|-..+. +-
T Consensus 230 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 298 (360)
T 1tw3_A 230 ------GLSDRVDVVEGDFFEPL--P---RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN 298 (360)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS
T ss_pred ------CCCCceEEEeCCCCCCC--C---CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc
Confidence 01124889999987632 2 349999987655433 33468999999999999999864433 11
Q ss_pred hhh---hccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 321 HFA---DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 321 h~~---~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
.+. +..-.......+++.+|++++++++||++++...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 299 EQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred chhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 000 0000000012357999999999999999988653
No 132
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.30 E-value=3.6e-11 Score=116.60 Aligned_cols=142 Identities=15% Similarity=0.105 Sum_probs=98.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|+++ +..++++|+ ..|+..++-.+...
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 215 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT-------------------------------- 215 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--------------------------------
Confidence 4579999999999999999986 568999999 99987665322100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYH----- 321 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~--ni~~yl~~I~~~LKpGG~wIN~GPLlyh----- 321 (394)
....++++..+||.+-. | ..||+|+....+..-+ ...+.+++++++|||||+++-..+..-.
T Consensus 216 ------~~~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 284 (332)
T 3i53_A 216 ------GLSGRAQVVVGSFFDPL--P---AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGT 284 (332)
T ss_dssp ------TCTTTEEEEECCTTSCC--C---CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCH
T ss_pred ------CcCcCeEEecCCCCCCC--C---CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccH
Confidence 11235899999997422 2 2799999887654333 3679999999999999999854332110
Q ss_pred hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 ~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
..+..-.......+.+.+|++++++++||++++..
T Consensus 285 ~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 285 GMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 00000000001246799999999999999999865
No 133
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.30 E-value=9.5e-13 Score=121.17 Aligned_cols=136 Identities=13% Similarity=0.017 Sum_probs=93.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..||++|..|+|+|+|..|+..++..+...
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 123 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY---------------------------------- 123 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 4569999999999999999999999999999999997766332110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
....++.++.+|+.++.. .++||+|++..-+....+....+..++++|||||++|-- ++... ....
T Consensus 124 ----~~~~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~-----~~~~~-~~~~ 189 (241)
T 3gdh_A 124 ----GIADKIEFICGDFLLLAS----FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR-----LSKKI-TNNI 189 (241)
T ss_dssp ----TCGGGEEEEESCHHHHGG----GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH-----HHHHH-CSCE
T ss_pred ----CCCcCeEEEECChHHhcc----cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH-----HHHhh-CCce
Confidence 011247899999988642 478999998754433444444677899999999997621 11100 0000
Q ss_pred --CccccCCHHHHHHHHHhCCCEEEE
Q 016155 331 --EMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 331 --~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
.....++.+++.+++..-|.-.+.
T Consensus 190 ~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 190 VYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp EEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred EEECCCCCCHHHHHHHhccCCCEEEE
Confidence 012356889999998877755443
No 134
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.30 E-value=4e-11 Score=116.05 Aligned_cols=152 Identities=15% Similarity=0.075 Sum_probs=103.2
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
...+.+.++-. + .+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 157 ~~~~~~~~~~~---~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------------------ 213 (334)
T 2ip2_A 157 FHEIPRLLDFR---G-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL------------------ 213 (334)
T ss_dssp HHHHHHHSCCT---T-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH------------------
T ss_pred HHHHHHhCCCC---C-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc------------------
Confidence 34444445422 3 79999999999999999988 678999999 99987655221100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~w 312 (394)
....++.+..+||.+- . .+.||+|+....+. ..+.....++.++++|||||++
T Consensus 214 --------------------~~~~~v~~~~~d~~~~--~---~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l 268 (334)
T 2ip2_A 214 --------------------LAGERVSLVGGDMLQE--V---PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRV 268 (334)
T ss_dssp --------------------HHTTSEEEEESCTTTC--C---CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCcEEEecCCCCCC--C---CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 0012478999999872 2 25799999887664 3445669999999999999999
Q ss_pred EEecCcch-------h-hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 313 INLGPLLY-------H-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 313 IN~GPLly-------h-~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
|-..+..- . +.+..-.......+.+.+|++++++++||++++..
T Consensus 269 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 269 VVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp EEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 85432210 0 00000000001245799999999999999998865
No 135
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.29 E-value=6.9e-11 Score=108.50 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=94.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
|+..+..+...+.. .++.+|||+|||+|.++..+++++..|+|+|+|..|+..++..+...
T Consensus 76 ~~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 136 (248)
T 2yvl_A 76 YPKDSFYIALKLNL---NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF---------------- 136 (248)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT----------------
T ss_pred cchhHHHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc----------------
Confidence 34444555555542 25679999999999999999999999999999999997666332110
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~w 312 (394)
....++.+..+|+.+... ..+.||+|+.. .++...+++.+.++|||||++
T Consensus 137 ----------------------~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l 186 (248)
T 2yvl_A 137 ----------------------NLGKNVKFFNVDFKDAEV---PEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPV 186 (248)
T ss_dssp ----------------------TCCTTEEEECSCTTTSCC---CTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEE
T ss_pred ----------------------CCCCcEEEEEcChhhccc---CCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEE
Confidence 001236778889877531 24689999863 234567899999999999999
Q ss_pred EEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 313 INLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 313 IN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
+-..|.. -...++.+++.+. |..++
T Consensus 187 ~~~~~~~----------------~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 187 GFLLPTA----------------NQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp EEEESSH----------------HHHHHHHHHSTTT-EEEEE
T ss_pred EEEeCCH----------------HHHHHHHHHHHhh-CCcce
Confidence 9644321 0234666667666 87665
No 136
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.29 E-value=2.2e-11 Score=118.23 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=93.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+|++. +..|+|+|+|..|+..++-.+..... ..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~------------------------~~---- 146 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR------------------------SL---- 146 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG------------------------GG----
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc------------------------cc----
Confidence 4579999999999999999988 46899999999999776632210000 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhH--HHHHHHHHHhccCCcEEEEecCcchhhhh
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNI--VEYIEIISRILKDGGVWINLGPLLYHFAD 324 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta--~ni--~~yl~~I~~~LKpGG~wIN~GPLlyh~~~ 324 (394)
...++.++.+|+.++... ...++||+|++..+.... ..+ .++++.++++|||||+++...+-.|.
T Consensus 147 -------~~~~v~~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--- 215 (304)
T 3bwc_A 147 -------ADPRATVRVGDGLAFVRQ-TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--- 215 (304)
T ss_dssp -------GCTTEEEEESCHHHHHHS-SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT---
T ss_pred -------CCCcEEEEECcHHHHHHh-ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc---
Confidence 012478899998875321 025789999986543222 222 58999999999999999863221110
Q ss_pred ccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 325 LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 325 ~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-....+++.+.++++||..++..
T Consensus 216 ---------~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 216 ---------DLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ---------chHHHHHHHHHHHhCCCCcEEEE
Confidence 01246788899999999887644
No 137
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.29 E-value=1.7e-10 Score=125.89 Aligned_cols=149 Identities=13% Similarity=0.127 Sum_probs=102.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G---f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..||++| ..|+|+|+|..|+..|+..++....+ . .
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA---------------k--r--------- 774 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK---------------E--A--------- 774 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT---------------T--C---------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch---------------h--h---------
Confidence 56799999999999999999998 89999999999998776433211000 0 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcc-hh--h
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLL-YH--F 322 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~wIN~GPLl-yh--~ 322 (394)
....++.+..||+.++. ...+.||+|++...|...++ ...+++.++++|||| ++|-..|.. |. |
T Consensus 775 -------~gl~nVefiqGDa~dLp---~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF 843 (950)
T 3htx_A 775 -------CNVKSATLYDGSILEFD---SRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTIL 843 (950)
T ss_dssp -------SSCSEEEEEESCTTSCC---TTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHH
T ss_pred -------cCCCceEEEECchHhCC---cccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhh
Confidence 00124889999998864 34689999998876665444 446999999999999 444322221 10 1
Q ss_pred hh-----------c--cC--CCCCccccCCHHHHHH----HHHhCCCEEEEEe
Q 016155 323 AD-----------L--YG--QEDEMSIELSLEDVKR----VALHYGFEFEKEK 356 (394)
Q Consensus 323 ~~-----------~--~g--~~~~~~ieLS~eEl~~----ll~~~GF~ii~e~ 356 (394)
.. . .+ ..+...++++.+|++. ++.+.||++....
T Consensus 844 ~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvG 896 (950)
T 3htx_A 844 QRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSG 896 (950)
T ss_dssp TCC------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhcccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEc
Confidence 10 0 00 0112356789999988 7888999886654
No 138
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=3.8e-12 Score=127.90 Aligned_cols=116 Identities=20% Similarity=0.233 Sum_probs=85.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.|.+..... ..++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.. +
T Consensus 219 ll~~l~~~l~~~-~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~----~--------------- 278 (381)
T 3dmg_A 219 LLEALQERLGPE-GVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEA----N--------------- 278 (381)
T ss_dssp HHHHHHHHHCTT-TTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHH----T---------------
T ss_pred HHHHHHHhhccc-CCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c---------------
Confidence 555555543200 12567999999999999999999999999999999999776632211 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--cc---CChhhHHHHHHHHHHhccCCc
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FI---DTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f--Fl---Dta~ni~~yl~~I~~~LKpGG 310 (394)
+.++.++.+|+.+... ..++||+|++.. +. .+..+...+++.+.++|||||
T Consensus 279 ---------------------~~~v~~~~~D~~~~~~---~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG 334 (381)
T 3dmg_A 279 ---------------------ALKAQALHSDVDEALT---EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGG 334 (381)
T ss_dssp ---------------------TCCCEEEECSTTTTSC---TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEE
T ss_pred ---------------------CCCeEEEEcchhhccc---cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCc
Confidence 0015778899887532 247999999873 22 234667899999999999999
Q ss_pred EEEEe
Q 016155 311 VWINL 315 (394)
Q Consensus 311 ~wIN~ 315 (394)
+++-.
T Consensus 335 ~l~iv 339 (381)
T 3dmg_A 335 VFFLV 339 (381)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99864
No 139
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=2.9e-11 Score=114.35 Aligned_cols=162 Identities=17% Similarity=0.084 Sum_probs=101.5
Q ss_pred HhhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHhhhh
Q 016155 137 IVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFIL 213 (394)
Q Consensus 137 ~~RDWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~fil 213 (394)
-+|.|... |. .+-+.|..-+....-+++.+|||+|||+|.++..||+. | =.|+|+|+|..|+..++.
T Consensus 51 e~r~w~p~----rs----klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~-- 120 (233)
T 4df3_A 51 EYREWNAY----RS----KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLT-- 120 (233)
T ss_dssp EEEECCTT----TC----HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHH--
T ss_pred eeeeECCC----ch----HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHH--
Confidence 47888853 32 24445544343333447899999999999999999987 4 479999999999954431
Q ss_pred hccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh
Q 016155 214 NHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH 293 (394)
Q Consensus 214 n~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ 293 (394)
.+.+ ..|+..+.+|..+....+...+.+|+|+..+.. ..
T Consensus 121 -~a~~--------------------------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~--~~ 159 (233)
T 4df3_A 121 -VVRD--------------------------------------RRNIFPILGDARFPEKYRHLVEGVDGLYADVAQ--PE 159 (233)
T ss_dssp -HSTT--------------------------------------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCCC--TT
T ss_pred -hhHh--------------------------------------hcCeeEEEEeccCccccccccceEEEEEEeccC--Ch
Confidence 1110 113556667765533223446789988754432 24
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 294 NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 294 ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+...++.++++.|||||+++-. +.+.-.+.. .++.. ...+..+.|++.||++++..
T Consensus 160 ~~~~~l~~~~r~LKpGG~lvI~--ik~r~~d~~-~p~~~----~~~~ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 160 QAAIVVRNARFFLRDGGYMLMA--IKARSIDVT-TEPSE----VYKREIKTLMDGGLEIKDVV 215 (233)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE--EECCHHHHH-TCCCH----HHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHHhccCCCEEEEE--EecccCCCC-CChHH----HHHHHHHHHHHCCCEEEEEE
Confidence 5668899999999999999842 111111111 11111 12334456778999998754
No 140
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.29 E-value=3.7e-11 Score=102.79 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=82.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..++++ +..++|+|+|. |+..
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------------------------------- 61 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------------------------------- 61 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------------------------------
Confidence 5679999999999999999988 47999999999 7410
Q ss_pred CCCCCCCCCCCceeEEecccccccC---CC--CCCCCccEEEEecccCChhhH-----------HHHHHHHHHhccCCcE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYS---DP--SQVGAWDAVVTCFFIDTAHNI-----------VEYIEIISRILKDGGV 311 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~---~~--~~~~~fD~VvT~fFlDta~ni-----------~~yl~~I~~~LKpGG~ 311 (394)
.++.+..+|+.+... .+ ...++||+|++...+....+. ..+++.+.++|||||+
T Consensus 62 ----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 131 (180)
T 1ej0_A 62 ----------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS 131 (180)
T ss_dssp ----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ----------CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcE
Confidence 125677888876420 00 124789999986443322221 6889999999999999
Q ss_pred EEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 312 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 312 wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
++-..+. .-..+++...+.+. |+.+...
T Consensus 132 l~~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~ 159 (180)
T 1ej0_A 132 FVVKVFQ----------------GEGFDEYLREIRSL-FTKVKVR 159 (180)
T ss_dssp EEEEEES----------------STTHHHHHHHHHHH-EEEEEEE
T ss_pred EEEEEec----------------CCcHHHHHHHHHHh-hhhEEee
Confidence 9853221 12456777777774 7766543
No 141
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.29 E-value=6.7e-11 Score=116.33 Aligned_cols=140 Identities=14% Similarity=0.116 Sum_probs=98.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G---f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||||||+|.++.++|..+ ..++|+|+|..|+..|+..+..+
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~------------------------------- 251 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS------------------------------- 251 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 56799999999999999999986 89999999999998776332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc--cCChhh----HHHHHHHHHHhccCCcEEEEecCcc
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF--IDTAHN----IVEYIEIISRILKDGGVWINLGPLL 319 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fF--lDta~n----i~~yl~~I~~~LKpGG~wIN~GPLl 319 (394)
... ++.+..+|+.++.. ..+.||+|++. |. +....+ ..++++.+.++|||||.++-+.|
T Consensus 252 -------g~~-~i~~~~~D~~~~~~---~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-- 318 (354)
T 3tma_A 252 -------GLS-WIRFLRADARHLPR---FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-- 318 (354)
T ss_dssp -------TCT-TCEEEECCGGGGGG---TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES--
T ss_pred -------CCC-ceEEEeCChhhCcc---ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC--
Confidence 011 37889999998743 24569999985 32 222222 25789999999999999985321
Q ss_pred hhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEE
Q 016155 320 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRK 383 (394)
Q Consensus 320 yh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~K 383 (394)
+.+-++.+++ .||+..+...+ ..+...+.+||++|
T Consensus 319 -----------------~~~~~~~~~~-~g~~~~~~~~l-----------~~g~l~~~i~vl~r 353 (354)
T 3tma_A 319 -----------------RPALLKRALP-PGFALRHARVV-----------EQGGVYPRVFVLEK 353 (354)
T ss_dssp -----------------CHHHHHHHCC-TTEEEEEEEEC-----------CBTTBCCEEEEEEE
T ss_pred -----------------CHHHHHHHhh-cCcEEEEEEEE-----------EeCCEEEEEEEEEc
Confidence 3344555666 99999876642 22334567888876
No 142
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.28 E-value=1.3e-11 Score=120.44 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=90.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+...|+.+-.. .++.+|||+|||||.++..|+++|. .|+|+|+|+.||..+.. +. +
T Consensus 73 l~~~l~~~~~~---~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r--~~---~--------------- 129 (291)
T 3hp7_A 73 LEKALAVFNLS---VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR--QD---D--------------- 129 (291)
T ss_dssp HHHHHHHTTCC---CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH--TC---T---------------
T ss_pred HHHHHHhcCCC---ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH--hC---c---------------
Confidence 44555543222 1567999999999999999999997 89999999999843210 00 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
| + ..+-..++..+........+||+|++.. |++ +...|.+++++|||||.+|
T Consensus 130 -------r-v---------------~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s----l~~vL~e~~rvLkpGG~lv 182 (291)
T 3hp7_A 130 -------R-V---------------RSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS----LNLILPALAKILVDGGQVV 182 (291)
T ss_dssp -------T-E---------------EEECSCCGGGCCGGGCTTCCCSEEEECCSSSC----GGGTHHHHHHHSCTTCEEE
T ss_pred -------c-c---------------ceecccCceecchhhCCCCCCCEEEEEeeHhh----HHHHHHHHHHHcCcCCEEE
Confidence 0 0 0000111111110000124599887643 443 3578999999999999998
Q ss_pred E-ecCcchhhhhc-cC--CC--CCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 314 N-LGPLLYHFADL-YG--QE--DEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 314 N-~GPLlyh~~~~-~g--~~--~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
- +.|-+ .-... .+ +. +......+.+++.+++..+||++...
T Consensus 183 ~lvkPqf-e~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 183 ALVKPQF-EAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp EEECGGG-TSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEECccc-ccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 6 45532 11111 11 10 00112458899999999999998874
No 143
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.6e-11 Score=113.59 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=79.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++..+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 111 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA------------------------------- 111 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 789999999999997766332210
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecC
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP 317 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GP 317 (394)
....++.+..||+.+........++||+|+... ...+...|++.+.++|||||++|-...
T Consensus 112 -------g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 112 -------GVDQRVTLREGPALQSLESLGECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp -------TCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred -------CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 112348899999877432111235899997633 345677899999999999999985433
No 144
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.28 E-value=8.7e-12 Score=109.56 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=85.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+||++|||. | ++|+|..|+..++-..
T Consensus 12 ~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~------------------------------------- 40 (176)
T 2ld4_A 12 AGQFVAVVWDKS-------------S-PVEALKGLVDKLQALT------------------------------------- 40 (176)
T ss_dssp TTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHT-------------------------------------
T ss_pred CCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhc-------------------------------------
Confidence 678999999996 2 3899999997554110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh-hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta-~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
..++.+..+|+.++...+..+++||+|++.+.+... ++..+.+++++++|||||+++-..|..- . .+ .
T Consensus 41 ------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~---~-~~-~ 109 (176)
T 2ld4_A 41 ------GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVET---A-VD-N 109 (176)
T ss_dssp ------TTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEES---S-SC-S
T ss_pred ------ccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccc---c-cc-c
Confidence 001567888988763211136899999998777766 6778999999999999999997544311 0 00 0
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
.....+.+++.++++++|| +..
T Consensus 110 --~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 110 --NSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp --SSSSCCHHHHHHHHHHTTC-EEE
T ss_pred --ccccCCHHHHHHHHHHCCC-cEe
Confidence 2345689999999999999 553
No 145
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.27 E-value=2.5e-11 Score=109.20 Aligned_cols=109 Identities=16% Similarity=0.121 Sum_probs=80.8
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+...+.+.+.. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 64 ~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 122 (210)
T 3lbf_A 64 YMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL------------------ 122 (210)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc------------------
Confidence 355555555543 26789999999999999999999999999999999997766332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
. ..++.+..+|+.+... ..++||+|+....+.... +.+.++|||||++|-
T Consensus 123 --------------------~-~~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~~~~------~~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 123 --------------------D-LHNVSTRHGDGWQGWQ---ARAPFDAIIVTAAPPEIP------TALMTQLDEGGILVL 172 (210)
T ss_dssp --------------------T-CCSEEEEESCGGGCCG---GGCCEEEEEESSBCSSCC------THHHHTEEEEEEEEE
T ss_pred --------------------C-CCceEEEECCcccCCc---cCCCccEEEEccchhhhh------HHHHHhcccCcEEEE
Confidence 0 0137889999887542 257899999876554433 268899999999985
No 146
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.27 E-value=9.3e-12 Score=109.06 Aligned_cols=103 Identities=18% Similarity=0.082 Sum_probs=74.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 77 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT--------------------------------- 77 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT---------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999975 8999999999997766322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHH--HhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS--RILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~--~~LKpGG~wIN 314 (394)
....++.++.+|+.+... ...+.||+|++..-.. .....+.++.+. ++|||||+++-
T Consensus 78 -----~~~~~~~~~~~d~~~~~~--~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 78 -----KAENRFTLLKMEAERAID--CLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp -----TCGGGEEEECSCHHHHHH--HBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CCCCceEEEECcHHHhHH--hhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEE
Confidence 011247889999887421 1236799998763111 134556677776 99999999984
No 147
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.26 E-value=5.9e-12 Score=121.35 Aligned_cols=174 Identities=9% Similarity=-0.086 Sum_probs=85.1
Q ss_pred cCCcccCCCCCCCccccchHHHhhhhccccccc------CCCCCCCCCCCCCCcCCCCCCcchHHHHHHHHH-HhhcCcc
Q 016155 71 EGPIEYKTASCPGKLENREETNQSCSNDFTDSN------GNASSPACDWLDPSIQLNVPLADVDKVRCIIRN-IVRDWAA 143 (394)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~d~~kv~~~L~q-~~RDWS~ 143 (394)
+.+|||.||+|+.-.......-+.+..+-..+| |+. ..|..+++..|+. .++.|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~f~~y~~~~i~-----------------~~dr~~a~~~i~~~~~~~~~- 62 (276)
T 2wa2_A 1 MAHHHHHHGICSSAPTLGEIWKRKLNQLDAKEFMAYRRRFVV-----------------EVDRNEAREALAKGKTNTGH- 62 (276)
T ss_dssp ------------CHHHHHHHHHHHHHHCCHHHHHHHHHTTCC-----------------CC-------------------
T ss_pred CCccccccccccccchHHHHHHHHHHHhhHHHHHHhhhcCCC-----------------ccCHHHHHHHHHcCCCCCCC-
Confidence 357889999999988877644333322222222 322 1233444444432 111111
Q ss_pred cChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccc
Q 016155 144 EGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWN 223 (394)
Q Consensus 144 eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~ 223 (394)
-+......+.+.++..+. +++.+|||+|||+|.++..+|++ ..|+|+|+|. |+.. +.+.
T Consensus 63 ----~~sR~a~KL~~i~~~~~~----~~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~-------a~~~---- 121 (276)
T 2wa2_A 63 ----AVSRGTAKLAWIDERGGV----ELKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTS-------GHEK---- 121 (276)
T ss_dssp ------CHHHHHHHHHHHTTSC----CCCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCT-------TSCC----
T ss_pred ----cCchHHHHHHHHHHcCCC----CCCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhh-------hhhc----
Confidence 111111224444443221 25679999999999999999999 6899999998 7421 1000
Q ss_pred cccccccccCCCCcccCccccccCCCCCCCCCCCCceeEE--ecccccccCCCCCCCCccEEEEecc-cCChh--h---H
Q 016155 224 IYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFF-IDTAH--N---I 295 (394)
Q Consensus 224 i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~--~GDf~ely~~~~~~~~fD~VvT~fF-lDta~--n---i 295 (394)
+ ++. ...+.++.++ .+|+.++. .++||+|++.+- +...+ + .
T Consensus 122 -------------------~--~~~-----~~~~~~v~~~~~~~D~~~l~-----~~~fD~Vvsd~~~~~~~~~~d~~~~ 170 (276)
T 2wa2_A 122 -------------------P--RLV-----ETFGWNLITFKSKVDVTKME-----PFQADTVLCDIGESNPTAAVEASRT 170 (276)
T ss_dssp -------------------C--CCC-----CCTTGGGEEEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHHH
T ss_pred -------------------h--hhh-----hhcCCCeEEEeccCcHhhCC-----CCCcCEEEECCCcCCCchhhhHHHH
Confidence 0 000 0011247888 99998753 478999998643 21111 1 1
Q ss_pred HHHHHHHHHhccCCc--EEEE
Q 016155 296 VEYIEIISRILKDGG--VWIN 314 (394)
Q Consensus 296 ~~yl~~I~~~LKpGG--~wIN 314 (394)
...|+.+.++||||| .||-
T Consensus 171 l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 171 LTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp HHHHHHHHHHHHHSTTCEEEE
T ss_pred HHHHHHHHHHhccCCCcEEEE
Confidence 237899999999999 8884
No 148
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.26 E-value=1.5e-11 Score=115.01 Aligned_cols=104 Identities=18% Similarity=0.226 Sum_probs=78.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
+.+.+...++. ++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++...
T Consensus 74 ~~~~~~~~~~~----~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 129 (269)
T 1p91_A 74 IVAQLRERLDD----KATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------------------- 129 (269)
T ss_dssp HHHHHHHHSCT----TCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHhcCC----CCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------------------
Confidence 55555555532 5679999999999999999998 889999999999996554110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
.++.+..+|+.++. ...++||+|++.+.. ..++++.++|||||+++
T Consensus 130 ------------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 130 ------------------------PQVTFCVASSHRLP---FSDTSMDAIIRIYAP-------CKAEELARVVKPGGWVI 175 (269)
T ss_dssp ------------------------TTSEEEECCTTSCS---BCTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEE
T ss_pred ------------------------CCcEEEEcchhhCC---CCCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEE
Confidence 12467788877653 345789999975432 34899999999999999
Q ss_pred EecC
Q 016155 314 NLGP 317 (394)
Q Consensus 314 N~GP 317 (394)
-..|
T Consensus 176 ~~~~ 179 (269)
T 1p91_A 176 TATP 179 (269)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 7544
No 149
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.26 E-value=1.7e-11 Score=123.50 Aligned_cols=118 Identities=19% Similarity=0.190 Sum_probs=88.4
Q ss_pred hHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccc
Q 016155 147 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIY 225 (394)
Q Consensus 147 ~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~ 225 (394)
..|..+|...|..-...+ ++..|||+|||+|-|+...|+.|. .|+|+|.|. |+..|+.+... +
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~------~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~----n----- 128 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAAL------RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRF----N----- 128 (376)
T ss_dssp HHHHHHHHHHHHTTHHHH------TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHH----T-----
T ss_pred HHHHHHHHHHHHhCHHhc------CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHH----c-----
Confidence 456667766553322333 456899999999999999999996 699999995 87766654321 1
Q ss_pred cccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHH
Q 016155 226 PWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEII 302 (394)
Q Consensus 226 Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---fFlDta~ni~~yl~~I 302 (394)
...+.+.++.||+.++-. .++||+||+- +++.....+..++...
T Consensus 129 -----------------------------~~~~~i~~i~~~~~~~~l----pe~~DvivsE~~~~~l~~e~~l~~~l~a~ 175 (376)
T 4hc4_A 129 -----------------------------GLEDRVHVLPGPVETVEL----PEQVDAIVSEWMGYGLLHESMLSSVLHAR 175 (376)
T ss_dssp -----------------------------TCTTTEEEEESCTTTCCC----SSCEEEEECCCCBTTBTTTCSHHHHHHHH
T ss_pred -----------------------------CCCceEEEEeeeeeeecC----CccccEEEeecccccccccchhhhHHHHH
Confidence 112348899999988743 3789999984 4566666688899999
Q ss_pred HHhccCCcEEE
Q 016155 303 SRILKDGGVWI 313 (394)
Q Consensus 303 ~~~LKpGG~wI 313 (394)
.++|||||++|
T Consensus 176 ~r~Lkp~G~~i 186 (376)
T 4hc4_A 176 TKWLKEGGLLL 186 (376)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhCCCCceEC
Confidence 99999999998
No 150
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.25 E-value=3.9e-11 Score=114.68 Aligned_cols=155 Identities=8% Similarity=-0.019 Sum_probs=94.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeC-CHHHHHHHhhhhhccccccccccccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEF-SYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~-S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
++++|.+.... .++.+|||+|||+|.++..+++.|. .|+|+|+ |..|+..++..... +
T Consensus 67 l~~~l~~~~~~---~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~----N------------- 126 (281)
T 3bzb_A 67 LADTLCWQPEL---IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIRE----H------------- 126 (281)
T ss_dssp HHHHHHHCGGG---TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHT----T-------------
T ss_pred HHHHHHhcchh---cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHH----h-------------
Confidence 45555554321 1456999999999999999999998 8999999 89999776633210 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEeccccc----ccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhcc--
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE----VYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK-- 307 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~e----ly~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LK-- 307 (394)
.. ... .+..+ ...++.+...|..+ +... ...++||+|+....+-..+++..+++++.++||
T Consensus 127 ~~-~~~---~~~~~--------~~~~v~~~~~~~~~~~~~~~~~-~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~ 193 (281)
T 3bzb_A 127 TA-NSC---SSETV--------KRASPKVVPYRWGDSPDSLQRC-TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALP 193 (281)
T ss_dssp CC----------------------CCCEEEECCTTSCTHHHHHH-HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCT
T ss_pred hh-hhc---ccccC--------CCCCeEEEEecCCCccHHHHhh-ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhccc
Confidence 00 000 00000 00134555333222 2100 014789999987655556778899999999999
Q ss_pred -C--CcEEEE-ecCcchhhhhccCCCCCccccCCHHHHHHHHHhCC-CEEEEE
Q 016155 308 -D--GGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKE 355 (394)
Q Consensus 308 -p--GG~wIN-~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~G-F~ii~e 355 (394)
| ||+++- +.|.. + .+.-..+++.+++++.| |++++.
T Consensus 194 ~p~~gG~l~v~~~~~~----------~--~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 194 ANDPTAVALVTFTHHR----------P--HLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp TTCTTCEEEEEECC--------------------CTHHHHHHHHSTTEEEEEE
T ss_pred CCCCCCEEEEEEEeee----------c--ccchhHHHHHHHHHhcCCEEEEEe
Confidence 9 998653 22210 0 11123467778889999 999875
No 151
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.25 E-value=2.1e-10 Score=108.23 Aligned_cols=177 Identities=16% Similarity=0.045 Sum_probs=101.7
Q ss_pred hhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhh
Q 016155 138 VRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILN 214 (394)
Q Consensus 138 ~RDWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn 214 (394)
+|.|... |. .+-..|.+.+.....+++.+|||+|||+|.++..||++ .-.|+|+|+|..|+.. +++
T Consensus 51 yr~w~~~----~s----kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~---l~~ 119 (232)
T 3id6_C 51 YREWNAF----RS----KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE---LLL 119 (232)
T ss_dssp EEECCTT----TC----HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH---HHH
T ss_pred hhhhchH----HH----HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH---HHH
Confidence 7788643 22 13344444443222347889999999999999999986 2489999999999631 111
Q ss_pred ccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh
Q 016155 215 HTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN 294 (394)
Q Consensus 215 ~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n 294 (394)
.+.+. .|+.++.+|+..........+.||+|++..-. ++
T Consensus 120 ~a~~r--------------------------------------~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~ 158 (232)
T 3id6_C 120 VAQRR--------------------------------------PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PD 158 (232)
T ss_dssp HHHHC--------------------------------------TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TT
T ss_pred Hhhhc--------------------------------------CCeEEEEcccccchhhhccccceEEEEecCCC---hh
Confidence 11110 13677888887532111124689999876433 33
Q ss_pred HHHH-HHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccc
Q 016155 295 IVEY-IEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNR 373 (394)
Q Consensus 295 i~~y-l~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~ 373 (394)
..+. ++.+.++|||||+++-. .++-.-+....+ -+...+ ....|++.||++++.... -+|..
T Consensus 159 ~~~il~~~~~~~LkpGG~lvis---ik~~~~d~t~~~---~e~~~~-~~~~L~~~gf~~~~~~~l-~p~~~--------- 221 (232)
T 3id6_C 159 QTDIAIYNAKFFLKVNGDMLLV---IKARSIDVTKDP---KEIYKT-EVEKLENSNFETIQIINL-DPYDK--------- 221 (232)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE---EC-------CCS---SSSTTH-HHHHHHHTTEEEEEEEEC-TTTCS---------
T ss_pred HHHHHHHHHHHhCCCCeEEEEE---EccCCcccCCCH---HHHHHH-HHHHHHHCCCEEEEEecc-CCCcC---------
Confidence 4443 45566699999999853 111110001111 122333 445566789999986642 23332
Q ss_pred cceEEEEEEEc
Q 016155 374 YFTAFWTMRKK 384 (394)
Q Consensus 374 Y~~~f~va~K~ 384 (394)
+-.+.|++|+
T Consensus 222 -~h~~v~~~~~ 231 (232)
T 3id6_C 222 -DHAIVLSKYK 231 (232)
T ss_dssp -SCEEEEEEEC
T ss_pred -ceEEEEEEeC
Confidence 3455667764
No 152
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.25 E-value=9.7e-12 Score=115.07 Aligned_cols=104 Identities=20% Similarity=0.150 Sum_probs=74.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
.+.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++-.+.. .
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~---~----------------------------- 81 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE---E----------------------------- 81 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---T-----------------------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH---h-----------------------------
Confidence 56799999999999999999884 5799999999999766522110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC---hhhH------HHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT---AHNI------VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt---a~ni------~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.+|+.++.......++||.|+..| .+. .... ..+++.++++|||||+++-
T Consensus 82 -------~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~-~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 82 -------GLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF-PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp -------TCSSEEEECSCHHHHHHHHSCTTCEEEEEEES-CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCcEEEEECCHHHHHHHHcCCCChheEEEeC-CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 01247899999888521002368999998664 222 1111 1599999999999999974
No 153
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.25 E-value=1.9e-11 Score=124.77 Aligned_cols=113 Identities=12% Similarity=0.107 Sum_probs=80.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCe-EEEEeCCHHHHHHHhhhhhccccc-cccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFI-SQGNEFSYYMMICSSFILNHTETA-GEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~-v~G~D~S~~ML~~s~filn~~~~~-~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|+++..+|.. |.. |+|+|+|..|+..|+-......+. ..+ .+
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~--------------------Gl--- 229 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY--------------------GK--- 229 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH--------------------TB---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh--------------------CC---
Confidence 6789999999999999999964 775 999999999998877543221100 000 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G 316 (394)
...++.|+.|||.++... ..-..||+|+...++- .+++...|.+++++|||||++|-.-
T Consensus 230 --------~~~rVefi~GD~~~lp~~-d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 230 --------KHAEYTLERGDFLSEEWR-ERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp --------CCCEEEEEECCTTSHHHH-HHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEESS
T ss_pred --------CCCCeEEEECcccCCccc-cccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEee
Confidence 013489999999886320 0014799998754332 3578889999999999999999643
No 154
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.24 E-value=1.8e-10 Score=114.20 Aligned_cols=144 Identities=17% Similarity=0.202 Sum_probs=98.8
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 158 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 158 ~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
..+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ ..|+.. +.+
T Consensus 192 ~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~-------a~~----------------- 244 (368)
T 3reo_A 192 KKILEMYNGF--EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQD-------APA----------------- 244 (368)
T ss_dssp HHHHTTCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTT-------CCC-----------------
T ss_pred HHHHHhcccc--cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHh-------hhh-----------------
Confidence 4444445421 25679999999999999999996 568999999 778621 100
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~wI 313 (394)
..+++++.|||.+- .| .+ |+|+..+.|. ..++....|++++++|||||++|
T Consensus 245 ---------------------~~~v~~~~~d~~~~--~p--~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~ 297 (368)
T 3reo_A 245 ---------------------FSGVEHLGGDMFDG--VP--KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVI 297 (368)
T ss_dssp ---------------------CTTEEEEECCTTTC--CC--CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---------------------cCCCEEEecCCCCC--CC--CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 02378999999872 22 23 9998887665 44567789999999999999998
Q ss_pred EecCcchh------------hhh--ccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 314 NLGPLLYH------------FAD--LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 314 N~GPLlyh------------~~~--~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-...+.-. ..+ .... .....+.+.+|++++++++||++++..
T Consensus 298 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 298 VAEYILPPSPDPSIATKVVIHTDALMLAY-NPGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp EEECCCCSSCCCCHHHHHHHHHHHHHHHH-SSBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeccCCCCCCchhhhHHHhhhHHHHhh-cCCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 54322100 000 0000 001346799999999999999998865
No 155
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.24 E-value=5.6e-11 Score=108.04 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=78.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||++ |..|+|+|+|..|+..++..+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 106 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA------------------------------- 106 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 889999999999997766332210
Q ss_pred CCCCCCCCCCCceeEEecccccccCC-C-CCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSD-P-SQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~-~-~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
...+++.++.||+.+.... + ...+.||+|+.... .++...+++.+.++|||||++|--.++
T Consensus 107 -------~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 107 -------NLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 0112478899998764210 0 01267999975432 345679999999999999998865554
No 156
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.24 E-value=2.6e-11 Score=106.26 Aligned_cols=104 Identities=19% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..++++| ..|+|+|+|..|+..++..+...
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 90 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT--------------------------------- 90 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh---------------------------------
Confidence 45699999999999999999998 48999999999997766332110
Q ss_pred CCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEec-ccCChhhHHHHHHHH--HHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCF-FIDTAHNIVEYIEII--SRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~-~~~~~~~fD~VvT~f-FlDta~ni~~yl~~I--~~~LKpGG~wIN 314 (394)
....++.++.+|+.+... .+...++||+|++.. |. ..+..+.++.+ .++|||||+++-
T Consensus 91 -----~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 91 -----KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA--KQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp -----TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG--GCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC--chhHHHHHHHHHHhcccCCCCEEEE
Confidence 001247889999887431 001147899999763 22 12344556666 889999999984
No 157
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=3.7e-11 Score=109.00 Aligned_cols=101 Identities=15% Similarity=0.003 Sum_probs=73.6
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 172 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
+.+|||+|||+|.++..++.+|. .|+|+|+|..|+..++..+... .
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~--------------------------~------- 101 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL--------------------------K------- 101 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 46899999999999999999986 8999999999997766322110 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHH--hccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR--ILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~--~LKpGG~wIN 314 (394)
. .++.++.+|+.++.. ...++||+|+...-.. ..+..+.++.+.+ +|||||+++-
T Consensus 102 -----~-~~v~~~~~D~~~~~~--~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 102 -----A-GNARVVNSNAMSFLA--QKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp -----C-CSEEEECSCHHHHHS--SCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----C-CcEEEEECCHHHHHh--hcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEE
Confidence 0 237889999887432 2357899998753211 2345677888865 5999999984
No 158
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.23 E-value=1.8e-11 Score=113.81 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=88.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||.+ +..|+|+|+|..|+..|+..+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------------------- 112 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-------------------------------- 112 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4669999999999999999987 789999999999998776332110
Q ss_pred CCCCCCCCCCceeEEeccccc-ccC-CCCC-CCCccEEEEe--cccCC--h-----hh------HHHHHHHHHHhccCCc
Q 016155 249 IHPASAGITEGFSMCGGDFVE-VYS-DPSQ-VGAWDAVVTC--FFIDT--A-----HN------IVEYIEIISRILKDGG 310 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~e-ly~-~~~~-~~~fD~VvT~--fFlDt--a-----~n------i~~yl~~I~~~LKpGG 310 (394)
...+++.++.+|+.+ +.. .+.. .++||+|++. |+-.. . .+ ....+..++++|||||
T Consensus 113 ------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG 186 (254)
T 2h00_A 113 ------NLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG 186 (254)
T ss_dssp ------TCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHT
T ss_pred ------CCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC
Confidence 011237888899765 221 1111 2689999987 33211 0 11 1245678899999999
Q ss_pred EEEEecCcch---hhhhccCC-CCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 311 VWINLGPLLY---HFADLYGQ-EDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 311 ~wIN~GPLly---h~~~~~g~-~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+.-+.+++- .+-...+- .......-+.+++.+++++.||+.++..
T Consensus 187 ~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 187 ELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 8763322110 00000000 0001122355899999999999887754
No 159
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.23 E-value=3.9e-11 Score=118.29 Aligned_cols=100 Identities=18% Similarity=0.138 Sum_probs=75.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|. .|+|+|.|. |+..++..+...
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~--------------------------------- 95 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSN--------------------------------- 95 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHT---------------------------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999987 899999995 876555332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFl--Dta~ni~~yl~~I~~~LKpGG~wI 313 (394)
....++.++.+|+.++.. .++||+|++...+ -..+++.+.+..+.++|||||++|
T Consensus 96 -----~l~~~v~~~~~d~~~~~~----~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 96 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEEcchhhCCC----CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 011347889999988632 2689999987322 233457788889999999999998
No 160
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.23 E-value=4e-11 Score=111.11 Aligned_cols=121 Identities=12% Similarity=0.100 Sum_probs=86.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.++..|....+. +++.+|||+|||+|..+..||+. |..|+++|+|..|+..++-.+...
T Consensus 43 ~~l~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------- 104 (221)
T 3dr5_A 43 QLLTTLAATTNG---NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--------------- 104 (221)
T ss_dssp HHHHHHHHHSCC---TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhhCC---CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 366666665432 13559999999999999999985 689999999999997776332210
Q ss_pred cCCCCcccCccccccCCCCCCCCCCC-CceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGIT-EGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~-~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG 310 (394)
... .++.++.||+.++... ...++||+|+... ...+..+|++.+.++|||||
T Consensus 105 -----------------------g~~~~~i~~~~gda~~~l~~-~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 105 -----------------------GYSPSRVRFLLSRPLDVMSR-LANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp -----------------------TCCGGGEEEECSCHHHHGGG-SCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEE
T ss_pred -----------------------CCCcCcEEEEEcCHHHHHHH-hcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCc
Confidence 111 3488999999886421 1257899996432 23457789999999999999
Q ss_pred EEEEecCcchh
Q 016155 311 VWINLGPLLYH 321 (394)
Q Consensus 311 ~wIN~GPLlyh 321 (394)
++|-- -++|+
T Consensus 158 ~lv~d-n~~~~ 167 (221)
T 3dr5_A 158 ALVLA-DALLD 167 (221)
T ss_dssp EEEET-TTTGG
T ss_pred EEEEe-CCCCC
Confidence 99943 33443
No 161
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.23 E-value=3.5e-11 Score=112.00 Aligned_cols=136 Identities=13% Similarity=0.023 Sum_probs=77.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHhhhhhccccccccc--------cccccccccCCCCc-
Q 016155 171 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWN--------IYPWIHSNCNSLSD- 237 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~--------i~Pfi~~~sn~~~~- 237 (394)
++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..|+..+...... ... .|-..-..+...+.
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPA-GLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH-HHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc-cccccchhhhhhhhhcccccchhhhh
Confidence 4579999999999999999987 678999999999998777433211000 000 00000000000000
Q ss_pred -ccCcc-ccccCCCCCCCCCCCCceeEEecccccccCCC--CCCCCccEEEEec-cc--CC------hhhHHHHHHHHHH
Q 016155 238 -SDQLR-PVSIPDIHPASAGITEGFSMCGGDFVEVYSDP--SQVGAWDAVVTCF-FI--DT------AHNIVEYIEIISR 304 (394)
Q Consensus 238 -~~qlr-~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~--~~~~~fD~VvT~f-Fl--Dt------a~ni~~yl~~I~~ 304 (394)
..+++ .++.... .....+..+|+.+..... ...++||+|++.. |+ .. ......+++.+++
T Consensus 130 ~~~~v~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (250)
T 1o9g_A 130 AARRLRERLTAEGG-------ALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLAS 202 (250)
T ss_dssp HHHHHHHHHHHTTS-------SCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhcccccc-------ccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHH
Confidence 00000 0000000 000238899988743100 0134899999873 22 21 3556789999999
Q ss_pred hccCCcEEEE
Q 016155 305 ILKDGGVWIN 314 (394)
Q Consensus 305 ~LKpGG~wIN 314 (394)
+|||||+++-
T Consensus 203 ~LkpgG~l~~ 212 (250)
T 1o9g_A 203 ALPAHAVIAV 212 (250)
T ss_dssp HSCTTCEEEE
T ss_pred hcCCCcEEEE
Confidence 9999999985
No 162
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.23 E-value=4.6e-10 Score=100.64 Aligned_cols=121 Identities=18% Similarity=0.074 Sum_probs=87.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 95 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--------------------------------- 95 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG---------------------------------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 567999999999999999999987 5999999999997665221100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
+.++.++.+|+.++. ++||+|++. |+.........+++.+.++| ||+++.. ..
T Consensus 96 -------~~~~~~~~~d~~~~~------~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~------~~---- 150 (207)
T 1wy7_A 96 -------KGKFKVFIGDVSEFN------SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH------LA---- 150 (207)
T ss_dssp -------TTSEEEEESCGGGCC------CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE------EC----
T ss_pred -------CCCEEEEECchHHcC------CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE------eC----
Confidence 003788999988741 489999987 44433344568899999999 7766632 00
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
-.-+.+.+.+++.+.||++...
T Consensus 151 ------~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 151 ------KPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEEE
T ss_pred ------CcCCHHHHHHHHHHCCCeEEEE
Confidence 0114566778889999988763
No 163
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.22 E-value=3e-10 Score=107.34 Aligned_cols=134 Identities=14% Similarity=0.035 Sum_probs=90.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++..+.... + .
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~---------------~-----~--------- 86 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD---------------N-----A--------- 86 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG---------------G-----T---------
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh---------------h-----C---------
Confidence 56799999999999999999995 689999999999977663211000 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccC----CCCCCCCccEEEEe--cccC----------------ChhhHHHHHHHHHHhc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYS----DPSQVGAWDAVVTC--FFID----------------TAHNIVEYIEIISRIL 306 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~----~~~~~~~fD~VvT~--fFlD----------------ta~ni~~yl~~I~~~L 306 (394)
...+++.++.+|+.++.. .+...++||+|++. ||.. ...++.++++.+.++|
T Consensus 87 ------~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 87 ------AFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM 160 (260)
T ss_dssp ------TTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE
T ss_pred ------CCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc
Confidence 011247889999987621 01125789999987 4432 1123678999999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 307 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 307 KpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
||||+++-+-|. -..+++.+++.+. |..++...
T Consensus 161 kpgG~l~~~~~~-----------------~~~~~~~~~l~~~-~~~~~i~~ 193 (260)
T 2ozv_A 161 VSGGQLSLISRP-----------------QSVAEIIAACGSR-FGGLEITL 193 (260)
T ss_dssp EEEEEEEEEECG-----------------GGHHHHHHHHTTT-EEEEEEEE
T ss_pred CCCCEEEEEEcH-----------------HHHHHHHHHHHhc-CCceEEEE
Confidence 999999852110 1346788888764 87666443
No 164
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.22 E-value=4.5e-11 Score=112.34 Aligned_cols=141 Identities=16% Similarity=0.078 Sum_probs=97.2
Q ss_pred hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccc
Q 016155 151 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPW 227 (394)
Q Consensus 151 ~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pf 227 (394)
..|+..+..+...+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+.... .
T Consensus 82 ~~~~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--g------- 149 (280)
T 1i9g_A 82 VIYPKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY--G------- 149 (280)
T ss_dssp CCCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH--T-------
T ss_pred eecHHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--C-------
Confidence 3566666776666542 25679999999999999999996 6899999999999976663221100 0
Q ss_pred cccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhcc
Q 016155 228 IHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 307 (394)
Q Consensus 228 i~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LK 307 (394)
....++.+..+|+.+.. ...+.||+|+... ++..++++.+.++||
T Consensus 150 ---------------------------~~~~~v~~~~~d~~~~~---~~~~~~D~v~~~~-----~~~~~~l~~~~~~L~ 194 (280)
T 1i9g_A 150 ---------------------------QPPDNWRLVVSDLADSE---LPDGSVDRAVLDM-----LAPWEVLDAVSRLLV 194 (280)
T ss_dssp ---------------------------SCCTTEEEECSCGGGCC---CCTTCEEEEEEES-----SCGGGGHHHHHHHEE
T ss_pred ---------------------------CCCCcEEEEECchHhcC---CCCCceeEEEECC-----cCHHHHHHHHHHhCC
Confidence 00123778889988753 2357899998732 244578999999999
Q ss_pred CCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHh-CCCEEEE
Q 016155 308 DGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEK 354 (394)
Q Consensus 308 pGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~-~GF~ii~ 354 (394)
|||+++-+.|..- ...++...+.+ .||..++
T Consensus 195 pgG~l~~~~~~~~----------------~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 195 AGGVLMVYVATVT----------------QLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp EEEEEEEEESSHH----------------HHHHHHHHHHHHSSBCCCE
T ss_pred CCCEEEEEeCCHH----------------HHHHHHHHHHhcCCcCCcE
Confidence 9999986544210 23455555555 7897655
No 165
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.22 E-value=4.3e-10 Score=111.00 Aligned_cols=141 Identities=18% Similarity=0.084 Sum_probs=96.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
...+|||+|||+|.++..|+++. -.++..|+ +.|+..++..+..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~--------------------------------- 224 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF--------------------------------- 224 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---------------------------------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------------------------------
Confidence 45699999999999999999995 45667777 6677655422110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCcch------
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLY------ 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKpGG~wIN~GPLly------ 320 (394)
...++++++.|||.+-. ...+|+|+....|.. .+...+.|+++++.|||||++|-+.+++-
T Consensus 225 ------~~~~rv~~~~gD~~~~~-----~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~ 293 (353)
T 4a6d_A 225 ------QEEEQIDFQEGDFFKDP-----LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP 293 (353)
T ss_dssp --------CCSEEEEESCTTTSC-----CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC
T ss_pred ------cccCceeeecCccccCC-----CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC
Confidence 11245899999998632 235799988776643 34567899999999999999986443221
Q ss_pred ---hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 321 ---HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 321 ---h~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+.+..--.-....+.|.+|++++++++||++++..
T Consensus 294 ~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~ 332 (353)
T 4a6d_A 294 LLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFK 332 (353)
T ss_dssp HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 111100000001346799999999999999999865
No 166
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.22 E-value=1.5e-10 Score=114.66 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=99.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
...+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ ..|+.. +.+
T Consensus 189 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~-------a~~---------------- 242 (364)
T 3p9c_A 189 TKKLLELYHGF--EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISE-------APQ---------------- 242 (364)
T ss_dssp HHHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTT-------CCC----------------
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHh-------hhh----------------
Confidence 34444555422 25679999999999999999986 568999999 777621 100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni~~yl~~I~~~LKpGG~w 312 (394)
..++.++.|||.+ . .| .+ |+|+..+.|. ..++....|++++++|||||++
T Consensus 243 ----------------------~~~v~~~~~D~~~-~-~p--~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 294 (364)
T 3p9c_A 243 ----------------------FPGVTHVGGDMFK-E-VP--SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKV 294 (364)
T ss_dssp ----------------------CTTEEEEECCTTT-C-CC--CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred ----------------------cCCeEEEeCCcCC-C-CC--CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 0247899999987 2 22 23 9999887665 4466789999999999999999
Q ss_pred EEecCcc---------hh---hhhc-cCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 313 INLGPLL---------YH---FADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 313 IN~GPLl---------yh---~~~~-~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+-...++ +. ..+. .........+.+.+|++++++++||++++..
T Consensus 295 ~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 295 VLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp EEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 8533221 00 0000 0000001346799999999999999999865
No 167
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.22 E-value=7e-11 Score=107.73 Aligned_cols=109 Identities=19% Similarity=0.081 Sum_probs=81.4
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
.+.+++.+.+.+... ++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++..+..
T Consensus 55 ~~~~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~----------------- 114 (231)
T 1vbf_A 55 ALNLGIFMLDELDLH---KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSY----------------- 114 (231)
T ss_dssp CHHHHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTT-----------------
T ss_pred CHHHHHHHHHhcCCC---CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhh-----------------
Confidence 445666666665432 567999999999999999999999999999999999766532210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 312 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~w 312 (394)
.+ ++.+..+|+.+... ..++||+|++...+.... +.+.++|||||++
T Consensus 115 -----------------------~~-~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l 161 (231)
T 1vbf_A 115 -----------------------YN-NIKLILGDGTLGYE---EEKPYDRVVVWATAPTLL------CKPYEQLKEGGIM 161 (231)
T ss_dssp -----------------------CS-SEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEE
T ss_pred -----------------------cC-CeEEEECCcccccc---cCCCccEEEECCcHHHHH------HHHHHHcCCCcEE
Confidence 01 37788899877321 247899999887665433 4688999999999
Q ss_pred EE
Q 016155 313 IN 314 (394)
Q Consensus 313 IN 314 (394)
|-
T Consensus 162 ~~ 163 (231)
T 1vbf_A 162 IL 163 (231)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 168
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.22 E-value=4.3e-11 Score=108.72 Aligned_cols=115 Identities=13% Similarity=0.090 Sum_probs=82.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
++..+.... ++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++..+...
T Consensus 55 ~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 112 (225)
T 3tr6_A 55 LLALLVKLM------QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA---------------- 112 (225)
T ss_dssp HHHHHHHHH------TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC----------------
Confidence 555555443 3569999999999999999998 889999999999997766433210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCC---CCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 309 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~---~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpG 309 (394)
...+++.++.+|+.+.... +...++||+|+... ...+...+++.+.++||||
T Consensus 113 ----------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 113 ----------------------GLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREG 167 (225)
T ss_dssp ----------------------TCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEE
T ss_pred ----------------------CCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCC
Confidence 0112378899998765310 00117899997322 2456788999999999999
Q ss_pred cEEEEecC
Q 016155 310 GVWINLGP 317 (394)
Q Consensus 310 G~wIN~GP 317 (394)
|++|-...
T Consensus 168 G~lv~~~~ 175 (225)
T 3tr6_A 168 GLIAVDNV 175 (225)
T ss_dssp EEEEEECS
T ss_pred cEEEEeCC
Confidence 99995433
No 169
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.21 E-value=1e-10 Score=114.67 Aligned_cols=139 Identities=11% Similarity=0.122 Sum_probs=93.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|+++. ..++++|++ .|+. + .... .
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~---~~~~-------------------------~----- 227 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--R---HRLD-------------------------A----- 227 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--T---CCCC-------------------------C-----
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--c---cccc-------------------------c-----
Confidence 56799999999999999999964 567899995 4431 1 0000 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcchh-----
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLLYH----- 321 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~wIN~GPLlyh----- 321 (394)
.....++.+..+||.+- . . .||+|+....+...++ ....|++++++|||||++|-..+..-.
T Consensus 228 -----~~~~~~v~~~~~d~~~~--~---p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~ 296 (348)
T 3lst_A 228 -----PDVAGRWKVVEGDFLRE--V---P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH 296 (348)
T ss_dssp -----GGGTTSEEEEECCTTTC--C---C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC
T ss_pred -----cCCCCCeEEEecCCCCC--C---C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc
Confidence 01123589999999732 1 2 8999998876654433 479999999999999999854322100
Q ss_pred ---hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 322 ---FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 322 ---~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+.+..........+.+.+|++++++++||++++..
T Consensus 297 ~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 297 QSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp HHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred hhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 00000000001346799999999999999998865
No 170
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.20 E-value=2.2e-11 Score=112.73 Aligned_cols=123 Identities=14% Similarity=0.056 Sum_probs=91.7
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhcccccccc
Q 016155 145 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEW 222 (394)
Q Consensus 145 g~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~ 222 (394)
...||=.+|.++-+.+..+++ ...+|||+|||+|-+|..++.. +..++|+|+|..|+.+++-.+...
T Consensus 28 STReRLp~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~------ 96 (200)
T 3fzg_A 28 STNERVATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL------ 96 (200)
T ss_dssp HHHTTGGGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS------
T ss_pred CHHHHhHhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 356777778888888888776 4669999999999999999888 789999999999998877443211
Q ss_pred ccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHH
Q 016155 223 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEII 302 (394)
Q Consensus 223 ~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I 302 (394)
....++.+ +|+.+.. ..+.||+|+..-.|....+....+..|
T Consensus 97 --------------------------------g~~~~v~~--~d~~~~~----~~~~~DvVLa~k~LHlL~~~~~al~~v 138 (200)
T 3fzg_A 97 --------------------------------KTTIKYRF--LNKESDV----YKGTYDVVFLLKMLPVLKQQDVNILDF 138 (200)
T ss_dssp --------------------------------CCSSEEEE--ECCHHHH----TTSEEEEEEEETCHHHHHHTTCCHHHH
T ss_pred --------------------------------CCCccEEE--ecccccC----CCCCcChhhHhhHHHhhhhhHHHHHHH
Confidence 00112333 5655432 247899999876555555555677799
Q ss_pred HHhccCCcEEEEec
Q 016155 303 SRILKDGGVWINLG 316 (394)
Q Consensus 303 ~~~LKpGG~wIN~G 316 (394)
++.|||||++|++.
T Consensus 139 ~~~L~pggvfISfp 152 (200)
T 3fzg_A 139 LQLFHTQNFVISFP 152 (200)
T ss_dssp HHTCEEEEEEEEEE
T ss_pred HHHhCCCCEEEEeC
Confidence 99999999999864
No 171
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.19 E-value=1.6e-10 Score=107.05 Aligned_cols=104 Identities=16% Similarity=0.102 Sum_probs=75.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++-.+...
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 120 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA------------------------------- 120 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3569999999999999999987 679999999999997766332210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-CCCCC--CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYS-DPSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~-~~~~~--~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
....++.++.+|+.+... .+... ++||+|+... ...+...+++.+.++|||||++|-.
T Consensus 121 -------g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 121 -------GVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDA---DKRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECS---CGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECC---CHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 001237788899765321 11112 6899997532 2356789999999999999999853
No 172
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.18 E-value=9.9e-11 Score=115.71 Aligned_cols=145 Identities=16% Similarity=0.134 Sum_probs=97.2
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 158 EELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 158 ~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
..|.+.++.. .+..+|||+|||+|+++..|++++ ..++++|+ ..|+..++
T Consensus 198 ~~l~~~~~~~--~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~------------------------- 249 (372)
T 1fp1_D 198 KRMLEIYTGF--EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP------------------------- 249 (372)
T ss_dssp HHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------------------------
T ss_pred HHHHHHhhcc--CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-------------------------
Confidence 4444555422 256799999999999999999986 46778899 88872111
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEE
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKpGG~wI 313 (394)
. . .++.++.+||.+ . .| . ||+|+....|...++ ....|++++++|||||++|
T Consensus 250 -------~--~-----------~~v~~~~~d~~~-~-~~---~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 250 -------P--L-----------SGIEHVGGDMFA-S-VP---Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp -------C--C-----------TTEEEEECCTTT-C-CC---C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------h--c-----------CCCEEEeCCccc-C-CC---C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 0 0 137889999987 2 22 3 999998877664444 4499999999999999998
Q ss_pred EecCcc-----------hh-hhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 314 NLGPLL-----------YH-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 314 N~GPLl-----------yh-~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-..+.. +. ..+..........+.+.+|++++++++||++++..
T Consensus 304 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 304 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp EEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred EEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 532110 00 00000000001235699999999999999998765
No 173
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.17 E-value=1.3e-10 Score=113.80 Aligned_cols=133 Identities=16% Similarity=0.132 Sum_probs=93.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++ . .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------------------------~--~-- 230 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS--------------------------------G--S-- 230 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------------------------C--B--
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc--------------------------------c--C--
Confidence 4579999999999999999987 678999999 88873111 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccC---CcEEEEecCcch---
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKD---GGVWINLGPLLY--- 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKp---GG~wIN~GPLly--- 320 (394)
.++.+..+||.+ . .| .||+|+....|....+ ....|++++++||| ||++|-..+..-
T Consensus 231 ---------~~v~~~~~d~~~-~-~p----~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 295 (352)
T 1fp2_A 231 ---------NNLTYVGGDMFT-S-IP----NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKK 295 (352)
T ss_dssp ---------TTEEEEECCTTT-C-CC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTT
T ss_pred ---------CCcEEEeccccC-C-CC----CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCC
Confidence 127889999976 2 22 3999998876654444 44999999999999 999885432210
Q ss_pred ------hh---hhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 321 ------HF---ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 321 ------h~---~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+ .+..-... ...+.+.+|++++++++||++++..
T Consensus 296 ~~~~~~~~~~~~d~~~~~~-~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 296 DENQVTQIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp SCHHHHHHHHHHHHHGGGG-TCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred CccchhhhHhhccHHHHhc-cCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 00 00000000 0235789999999999999998755
No 174
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.17 E-value=5e-11 Score=111.60 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+-.+....+.. .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~-----------------~---------- 98 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAP-----------------A---------- 98 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHST-----------------T----------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHH-----------------h----------
Confidence 5678999999999999999998 5789999999999977663322110000 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh----h-----HHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH----N-----IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~----n-----i~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.+|+.+........++||.|+.+| .|.-. . ...+++.++++|||||+++-
T Consensus 99 ------~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~-~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 99 ------GGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLF-PDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp ------CCCTTEEEEECCTTTCHHHHCCTTCEEEEEEES-CC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------cCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeC-CCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 001248899999876211002358899997654 33211 0 13689999999999999984
No 175
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.17 E-value=8.6e-11 Score=106.19 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||+. |..|+|+|+|..|+..++-.+...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 104 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN------------------------------- 104 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-------------------------------
Confidence 3569999999999999999988 789999999999997766332210
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...+++.++.+|+.++.. ...+ ||+|+.... ..+...+++.+.++|||||++|-
T Consensus 105 -------~~~~~v~~~~~d~~~~~~--~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 105 -------GLIDRVELQVGDPLGIAA--GQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp -------SGGGGEEEEESCHHHHHT--TCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred -------CCCceEEEEEecHHHHhc--cCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEE
Confidence 001237889999877532 1236 999986532 34567899999999999999985
No 176
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.17 E-value=5.2e-10 Score=111.44 Aligned_cols=125 Identities=14% Similarity=0.225 Sum_probs=90.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||||||+|.++.++|..|. .|+|+|+|..|+..|+..+...
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-------------------------------- 264 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-------------------------------- 264 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 567899999999999999999998 8999999999998776332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc--cC---ChhhH-HHHHHHHHHhccCCcEEEEecCcch
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF--ID---TAHNI-VEYIEIISRILKDGGVWINLGPLLY 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fF--lD---ta~ni-~~yl~~I~~~LKpGG~wIN~GPLly 320 (394)
....++.+..+|+.++.. ..++||+|++. |. +. ...++ .++++.+.++| +|+.++-
T Consensus 265 ------gl~~~i~~~~~D~~~~~~---~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i------ 328 (373)
T 3tm4_A 265 ------GVLDKIKFIQGDATQLSQ---YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI------ 328 (373)
T ss_dssp ------TCGGGCEEEECCGGGGGG---TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE------
T ss_pred ------CCCCceEEEECChhhCCc---ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE------
Confidence 011247899999998743 35789999986 32 21 22333 56788999989 3333331
Q ss_pred hhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 321 HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 321 h~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
.-+.+.+++++.+.||+..+...
T Consensus 329 --------------~~~~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 329 --------------TTEKKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp --------------ESCHHHHHHHHHHTTEEEEEEEE
T ss_pred --------------ECCHHHHHHHHHHcCCEEEEEEE
Confidence 12567888899999999987653
No 177
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=2.9e-10 Score=112.09 Aligned_cols=134 Identities=13% Similarity=0.028 Sum_probs=91.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+... .
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~--------------------------g------- 199 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLA--------------------------G------- 199 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 4569999999999999999999999999999999997766322100 0
Q ss_pred CCCCCCCC-ceeEEecccccccCC-CCCCCCccEEEEe---cccC-------ChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 251 PASAGITE-GFSMCGGDFVEVYSD-PSQVGAWDAVVTC---FFID-------TAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 251 p~~~~~~~-~ls~~~GDf~ely~~-~~~~~~fD~VvT~---fFlD-------ta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
..+ ++.++.+|+.++... ....++||+|+.. |-.. ...+..++++.+.++|||||+++-.-..
T Consensus 200 -----l~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 200 -----LEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp -----CTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred -----CCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 011 267899998775310 0013689999974 2221 2345678899999999999996531100
Q ss_pred chhhhhccCCCCCccccCCHHHHHHHHH----hCCCEEEEEe
Q 016155 319 LYHFADLYGQEDEMSIELSLEDVKRVAL----HYGFEFEKEK 356 (394)
Q Consensus 319 lyh~~~~~g~~~~~~ieLS~eEl~~ll~----~~GF~ii~e~ 356 (394)
...++.+++.+++. +.|+++...+
T Consensus 275 --------------~~~~~~~~~~~~l~~a~~~~g~~v~~~e 302 (332)
T 2igt_A 275 --------------SIRASFYSMHELMRETMRGAGGVVASGE 302 (332)
T ss_dssp --------------CTTSCHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred --------------CCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 12345555555555 7899887544
No 178
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=5.2e-10 Score=105.67 Aligned_cols=134 Identities=13% Similarity=0.172 Sum_probs=100.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+..|.++++ ++.+|||+|||+|.++..||++|. .|+|+|+|..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~----~-------------- 68 (230)
T 3lec_A 12 LQKVANYVP-----KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE----H-------------- 68 (230)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 456666665 467999999999999999999985 699999999999877632211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...+++.+..||.++... ..+.||+|+.+=-. +.-+.+.++.....|+++|+||-
T Consensus 69 --------------------gl~~~I~~~~gD~l~~~~---~~~~~D~IviaGmG--g~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 69 --------------------GLTSKIDVRLANGLSAFE---EADNIDTITICGMG--GRLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCCcEEEEECchhhccc---cccccCEEEEeCCc--hHHHHHHHHHHHHHhCcCCEEEE
Confidence 112348899999887643 23479998754321 23477889999999999999994
Q ss_pred ecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 315 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 315 ~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.| ....+++++.+.+.||++++|.
T Consensus 124 -qp-----------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 124 -QP-----------------NNREDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp -EE-----------------SSCHHHHHHHHHHTTEEEEEEE
T ss_pred -EC-----------------CCChHHHHHHHHHCCCEEEEEE
Confidence 12 1358899999999999999977
No 179
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.16 E-value=8.6e-11 Score=120.35 Aligned_cols=130 Identities=15% Similarity=0.142 Sum_probs=85.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
..++..+.+.+.. .++.+|||+|||+|+++..||++ |. .|+|+|+|..|+..|.-++..+.+...
T Consensus 228 p~~v~~ml~~l~l---~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~---------- 294 (433)
T 1u2z_A 228 PNFLSDVYQQCQL---KKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCK---------- 294 (433)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHH----------
Confidence 4566666665543 26779999999999999999996 64 699999999999877444332221000
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecc-cccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GD-f~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG 310 (394)
...+. ..++.++.|| +.+....+...+.||+|+...++ ..+++...|+++.++|||||
T Consensus 295 ---------~~Gl~-----------~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG 353 (433)
T 1u2z_A 295 ---------LYGMR-----------LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGC 353 (433)
T ss_dssp ---------HTTBC-----------CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTC
T ss_pred ---------HcCCC-----------CCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCe
Confidence 00000 0246777764 43210000013689999976444 23678889999999999999
Q ss_pred EEEEecC
Q 016155 311 VWINLGP 317 (394)
Q Consensus 311 ~wIN~GP 317 (394)
++|...|
T Consensus 354 ~lVi~d~ 360 (433)
T 1u2z_A 354 KIISLKS 360 (433)
T ss_dssp EEEESSC
T ss_pred EEEEeec
Confidence 9996433
No 180
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.16 E-value=7.5e-10 Score=104.20 Aligned_cols=134 Identities=14% Similarity=0.089 Sum_probs=99.6
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
++.|.++++ ++.+|||+|||+|.++..+|+.|. .|+|+|++..|+..|+--+.. +
T Consensus 6 L~~l~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 62 (225)
T 3kr9_A 6 LELVASFVS-----QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA----H-------------- 62 (225)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 456666665 457999999999999999999985 699999999999877632211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...+++.+..||.++-... .+.||+|+.+-- ...-+.+.++.....|+|||++|-
T Consensus 63 --------------------gl~~~i~~~~~d~l~~l~~---~~~~D~IviaG~--Gg~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 63 --------------------GLKEKIQVRLANGLAAFEE---TDQVSVITIAGM--GGRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp --------------------TCTTTEEEEECSGGGGCCG---GGCCCEEEEEEE--CHHHHHHHHHHTGGGCTTCCEEEE
T ss_pred --------------------CCCceEEEEECchhhhccc---CcCCCEEEEcCC--ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 1123478899998764321 136999886532 233367889999999999999984
Q ss_pred ecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 315 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 315 ~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
-| . ...+.+++.+.+.||.++.+.
T Consensus 118 -q~----------------~-~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 118 -QP----------------N-NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -EE----------------S-SCHHHHHHHHHHTTEEEEEEE
T ss_pred -EC----------------C-CCHHHHHHHHHHCCCEEEEEE
Confidence 11 1 367899999999999999976
No 181
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.6e-10 Score=104.14 Aligned_cols=110 Identities=18% Similarity=0.091 Sum_probs=79.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHhhhhhcccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 230 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G---f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~ 230 (394)
+.++..+.+.+.. .++.+|||+|||+|.++..|++.+ ..|+|+|+|..|+..++..+...
T Consensus 63 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------- 125 (215)
T 2yxe_A 63 IHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL-------------- 125 (215)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------
Confidence 3455555555542 256799999999999999999987 79999999999997665332110
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 016155 231 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 231 ~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG 310 (394)
. ..++.+..+|+.+... ..+.||+|+....+.... +.+.++|||||
T Consensus 126 ------------~-------------~~~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG 171 (215)
T 2yxe_A 126 ------------G-------------YDNVIVIVGDGTLGYE---PLAPYDRIYTTAAGPKIP------EPLIRQLKDGG 171 (215)
T ss_dssp ------------T-------------CTTEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEE
T ss_pred ------------C-------------CCCeEEEECCcccCCC---CCCCeeEEEECCchHHHH------HHHHHHcCCCc
Confidence 0 0126778888755322 246899999887665443 48899999999
Q ss_pred EEEE
Q 016155 311 VWIN 314 (394)
Q Consensus 311 ~wIN 314 (394)
++|-
T Consensus 172 ~lv~ 175 (215)
T 2yxe_A 172 KLLM 175 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 182
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=7.1e-11 Score=115.94 Aligned_cols=114 Identities=14% Similarity=0.069 Sum_probs=82.6
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 233 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn 233 (394)
....|.+.++.. .+.+|||+|||+|.++..++++| ..|+|+|+|..|+..++..+.. +
T Consensus 184 ~~~~ll~~l~~~---~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~----~------------- 243 (343)
T 2pjd_A 184 GSQLLLSTLTPH---TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA----N------------- 243 (343)
T ss_dssp HHHHHHHHSCTT---CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH----T-------------
T ss_pred HHHHHHHhcCcC---CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----h-------------
Confidence 445555555322 35689999999999999999998 5899999999999776632211 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC-----ChhhHHHHHHHHHHhccC
Q 016155 234 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKD 308 (394)
Q Consensus 234 ~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD-----ta~ni~~yl~~I~~~LKp 308 (394)
. ....++.+|+.+.. .++||+|++..-+. +..+..++++.++++|||
T Consensus 244 ---------~--------------~~~~~~~~d~~~~~-----~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp 295 (343)
T 2pjd_A 244 ---------G--------------VEGEVFASNVFSEV-----KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS 295 (343)
T ss_dssp ---------T--------------CCCEEEECSTTTTC-----CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE
T ss_pred ---------C--------------CCCEEEEccccccc-----cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCC
Confidence 0 01355778876632 47899999875333 345677899999999999
Q ss_pred CcEEEEecC
Q 016155 309 GGVWINLGP 317 (394)
Q Consensus 309 GG~wIN~GP 317 (394)
||.++-+.+
T Consensus 296 gG~l~i~~~ 304 (343)
T 2pjd_A 296 GGELRIVAN 304 (343)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999986443
No 183
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.14 E-value=9e-10 Score=98.55 Aligned_cols=113 Identities=15% Similarity=0.100 Sum_probs=80.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+++.|. .|+|+|+|..|+..++..+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------------------------------- 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------------------------------- 95 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------------------------------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------------------------------
Confidence 567999999999999999999998 59999999999976552110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
++.++.+|+.++ + ++||+|++. |+.-......++++.+.++| |++++-..|
T Consensus 96 ---------~~~~~~~d~~~~---~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~---------- 148 (200)
T 1ne2_A 96 ---------GVNFMVADVSEI---S---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA---------- 148 (200)
T ss_dssp ---------TSEEEECCGGGC---C---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEG----------
T ss_pred ---------CCEEEECcHHHC---C---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC----------
Confidence 257889998874 1 689999986 32222122347899999999 665553211
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
-+.+.+.+++...| ++..
T Consensus 149 --------~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 149 --------KARDFLRREFSARG-DVFR 166 (200)
T ss_dssp --------GGHHHHHHHHHHHE-EEEE
T ss_pred --------chHHHHHHHHHHCC-CEEE
Confidence 13566888888888 6655
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.12 E-value=1.4e-10 Score=106.46 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=77.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||+. |..|+|+|+|..|+..++..+...
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 101 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL-------------------------------- 101 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4569999999999999999998 689999999999997766332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~ 315 (394)
....++.+..+|+.+........+.||+|+...-.. +..++++.+.++|||||++|-.
T Consensus 102 ------~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 102 ------GLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp ------TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------CCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEE
Confidence 011237788899877421000146899998765543 5678999999999999999853
No 185
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.12 E-value=8.8e-10 Score=105.00 Aligned_cols=134 Identities=14% Similarity=0.073 Sum_probs=99.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+..|.++++ ++.+|||+|||+|.++..||+.|- .|+|+|++..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 68 (244)
T 3gnl_A 12 LEKVASYIT-----KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS----S-------------- 68 (244)
T ss_dssp HHHHHTTCC-----SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 456666665 467999999999999999999985 699999999999877632211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...+++.+..||.++... ..+.||+|+.+-- .+.-+.+.|+.....|+++|++|-
T Consensus 69 --------------------gl~~~I~v~~gD~l~~~~---~~~~~D~Iviagm--Gg~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 69 --------------------GLTEQIDVRKGNGLAVIE---KKDAIDTIVIAGM--GGTLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEE--CHHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCceEEEEecchhhccC---ccccccEEEEeCC--chHHHHHHHHHHHHHhCCCCEEEE
Confidence 112347889999887543 1236999886422 123477889999999999999984
Q ss_pred ecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 315 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 315 ~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.| ....+++++.+.+.||.++.+.
T Consensus 124 -q~-----------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 124 -QP-----------------NIAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp -EE-----------------SSCHHHHHHHHHHHTEEEEEEE
T ss_pred -Ec-----------------CCChHHHHHHHHHCCCEEEEEE
Confidence 11 1267899999999999998876
No 186
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.12 E-value=1.9e-10 Score=108.14 Aligned_cols=112 Identities=15% Similarity=0.111 Sum_probs=81.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
++..|.... ++.+|||+|||+|..+..||+. |..|+++|+|..|+..++-.+...
T Consensus 70 ll~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---------------- 127 (247)
T 1sui_A 70 FLSMLLKLI------NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA---------------- 127 (247)
T ss_dssp HHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 555555543 3569999999999999999987 789999999999997766332210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CCC---CCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPS---QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 308 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~-~~~---~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKp 308 (394)
....++.++.||+.++.. ... ..++||+|+.... ..+...|++.+.++|||
T Consensus 128 ----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 128 ----------------------GVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKV 182 (247)
T ss_dssp ----------------------TCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCT
T ss_pred ----------------------CCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCC
Confidence 011347889999877421 000 1478999975432 34677999999999999
Q ss_pred CcEEEE
Q 016155 309 GGVWIN 314 (394)
Q Consensus 309 GG~wIN 314 (394)
||++|-
T Consensus 183 GG~lv~ 188 (247)
T 1sui_A 183 GGVIGY 188 (247)
T ss_dssp TCCEEE
T ss_pred CeEEEE
Confidence 999984
No 187
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.12 E-value=1.4e-10 Score=119.93 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..++..+.. +
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~----~----------------------------- 203 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKS----N----------------------------- 203 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHH----c-----------------------------
Confidence 567999999999999999999986 899999998 98666533211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--ccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f--FlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...+++.++.+|+.++.. .++||+|++.. +....++..+.+..+.++|||||++|
T Consensus 204 -----gl~~~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 204 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEECchhhCcc----CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 011348899999988532 26899999863 33333456778888999999999998
No 188
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.11 E-value=3.3e-10 Score=108.99 Aligned_cols=101 Identities=12% Similarity=0.266 Sum_probs=75.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..++..+...
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~--------------------------------- 169 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH--------------------------------- 169 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 3468999999999999999998 889999999999998776332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCc---cEEEEec-ccCCh------------------hhHHHHHHHHH-Hhc
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAW---DAVVTCF-FIDTA------------------HNIVEYIEIIS-RIL 306 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~f---D~VvT~f-FlDta------------------~ni~~yl~~I~-~~L 306 (394)
...+++.++.+|+.+... ++| |+|+++- |+... .+-.++++.|. +.|
T Consensus 170 -----~l~~~v~~~~~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l 239 (284)
T 1nv8_A 170 -----GVSDRFFVRKGEFLEPFK-----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD 239 (284)
T ss_dssp -----TCTTSEEEEESSTTGGGG-----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCC
T ss_pred -----CCCCceEEEECcchhhcc-----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcC
Confidence 011237899999987432 578 9999872 32211 12237899999 999
Q ss_pred cCCcEEEE
Q 016155 307 KDGGVWIN 314 (394)
Q Consensus 307 KpGG~wIN 314 (394)
||||+++-
T Consensus 240 ~pgG~l~~ 247 (284)
T 1nv8_A 240 TSGKIVLM 247 (284)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 99999984
No 189
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.11 E-value=3.7e-10 Score=113.04 Aligned_cols=117 Identities=12% Similarity=-0.009 Sum_probs=81.8
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 157 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 157 l~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
...|.+.++.. .+.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+.. +.
T Consensus 211 ~~~ll~~l~~~---~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~----ng------------- 270 (375)
T 4dcm_A 211 ARFFMQHLPEN---LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET----NM------------- 270 (375)
T ss_dssp HHHHHHTCCCS---CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH----HC-------------
T ss_pred HHHHHHhCccc---CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH----cC-------------
Confidence 34455555533 4579999999999999999999 68999999999999776633211 00
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--cc--CC-hhhHHHHHHHHHHhccCC
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FI--DT-AHNIVEYIEIISRILKDG 309 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f--Fl--Dt-a~ni~~yl~~I~~~LKpG 309 (394)
+ + ...++.+..+|+.+.. ..++||+|++.. +- .. .....++|+.+.++||||
T Consensus 271 ---------l--~--------~~~~v~~~~~D~~~~~----~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 271 ---------P--E--------ALDRCEFMINNALSGV----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp ---------G--G--------GGGGEEEEECSTTTTC----CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred ---------C--C--------cCceEEEEechhhccC----CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 0 0 0013678999988733 257899999873 21 11 122347899999999999
Q ss_pred cEEEEec
Q 016155 310 GVWINLG 316 (394)
Q Consensus 310 G~wIN~G 316 (394)
|+++-++
T Consensus 328 G~l~iv~ 334 (375)
T 4dcm_A 328 GELYIVA 334 (375)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9998644
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.11 E-value=6.4e-11 Score=111.08 Aligned_cols=103 Identities=12% Similarity=0.037 Sum_probs=75.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||+. |..|+|+|+|..|+..++-.+...
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 108 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA------------------------------- 108 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-------------------------------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999984 689999999999975443221100
Q ss_pred CCCCCCCCCCCceeEEecccccccCCC-C--CCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDP-S--QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~-~--~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.||+.++.... . ..++||+|+... ...+...|++.+.++|||||++|-
T Consensus 109 -------g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 109 -------KQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCCeEEEE
Confidence 11235889999998753200 0 037899996543 245677899999999999999984
No 191
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.11 E-value=2.9e-10 Score=101.28 Aligned_cols=46 Identities=13% Similarity=-0.080 Sum_probs=35.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 203 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~ 203 (394)
.+++.++++ .-. +++.+|||+|||+|.++..|+++ +..|+|+|+|.
T Consensus 9 kl~~~~~~~-~~~--~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 9 KLIELDNKY-LFL--KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHHHH-CCC--CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHc-CCC--CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 455555543 211 14679999999999999999987 47899999998
No 192
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.10 E-value=3.2e-10 Score=110.08 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+|++. .-.|+++|+|..|+..++--+..... + ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~--------------~---------~~---- 135 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA--------------G---------SY---- 135 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS--------------S---------CT----
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc--------------c---------cc----
Confidence 4579999999999999999998 35799999999999877632211000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.||..+... ...++||+|++..+.. .+..+ .++++.++++|||||+++.
T Consensus 136 -------~~~rv~~~~~D~~~~l~--~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 196 (294)
T 3adn_A 136 -------DDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -------TCTTCCEECSCSCC-----CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEE
T ss_pred -------cCCceEEEEChHHHHHh--hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEE
Confidence 01247889999887542 2357899999865422 12222 6899999999999999985
No 193
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.10 E-value=3.3e-10 Score=109.83 Aligned_cols=113 Identities=18% Similarity=0.109 Sum_probs=81.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCe---EEEEeCCHHHHHHHhhhhhccccccccccccccccc
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI---SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 231 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~---v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~ 231 (394)
.+++.+.+.+... ++.+|||+|||+|.++..||++|.. |+|+|+|..|+..++..+...
T Consensus 62 ~~~~~l~~~l~~~---~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------- 123 (317)
T 1dl5_A 62 SLMALFMEWVGLD---KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--------------- 123 (317)
T ss_dssp HHHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhcCCC---CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 3555555554322 5679999999999999999999876 999999999997666322110
Q ss_pred cCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 016155 232 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 311 (394)
Q Consensus 232 sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~ 311 (394)
. ..++.+..+|+.+... ..++||+|++...+.... +.+.++|||||+
T Consensus 124 -----------------------g-~~~v~~~~~d~~~~~~---~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 124 -----------------------G-IENVIFVCGDGYYGVP---EFSPYDVIFVTVGVDEVP------ETWFTQLKEGGR 170 (317)
T ss_dssp -----------------------T-CCSEEEEESCGGGCCG---GGCCEEEEEECSBBSCCC------HHHHHHEEEEEE
T ss_pred -----------------------C-CCCeEEEECChhhccc---cCCCeEEEEEcCCHHHHH------HHHHHhcCCCcE
Confidence 0 0127788999887432 247899999887665443 578899999999
Q ss_pred EEE-ecCc
Q 016155 312 WIN-LGPL 318 (394)
Q Consensus 312 wIN-~GPL 318 (394)
++. ++|.
T Consensus 171 lvi~~~~~ 178 (317)
T 1dl5_A 171 VIVPINLK 178 (317)
T ss_dssp EEEEBCBG
T ss_pred EEEEECCC
Confidence 985 4443
No 194
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.10 E-value=8.5e-11 Score=109.84 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=85.4
Q ss_pred CCeEEEecCCCChhHHHHHHc------CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccc
Q 016155 172 PPACLVPGAGLGRLALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 245 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~------Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~ 245 (394)
+.+|||+|||+|..+..||++ +..|+|+|+|..|+..++ .
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~--------------------------------~-- 127 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA--------------------------------S-- 127 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG--------------------------------G--
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh--------------------------------c--
Confidence 469999999999999999987 789999999999963211 0
Q ss_pred cCCCCCCCCCCCCceeEEecccccc--cCCCCCCCCccEEEEecccCChhhHHHHHHHHHH-hccCCcEEEEecCcchhh
Q 016155 246 IPDIHPASAGITEGFSMCGGDFVEV--YSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR-ILKDGGVWINLGPLLYHF 322 (394)
Q Consensus 246 iPDv~p~~~~~~~~ls~~~GDf~el--y~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~-~LKpGG~wIN~GPLlyh~ 322 (394)
...++.++.||+.++ ... ....+||+|+.... . .++..+|+.+++ +|||||++|-... ..+
T Consensus 128 ----------~~~~v~~~~gD~~~~~~l~~-~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~--~~~ 191 (236)
T 2bm8_A 128 ----------DMENITLHQGDCSDLTTFEH-LREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM--IPY 191 (236)
T ss_dssp ----------GCTTEEEEECCSSCSGGGGG-GSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC--HHH
T ss_pred ----------cCCceEEEECcchhHHHHHh-hccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC--ccc
Confidence 012478899998874 111 11247999875432 1 257789999997 9999999995321 111
Q ss_pred hhccCCCCCccccCCHHHHHHHHHhC--CCEEE
Q 016155 323 ADLYGQEDEMSIELSLEDVKRVALHY--GFEFE 353 (394)
Q Consensus 323 ~~~~g~~~~~~ieLS~eEl~~ll~~~--GF~ii 353 (394)
. ...+.+++.++++.. +|+++
T Consensus 192 ~----------~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 192 W----------YRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp H----------HHHCHHHHHHHHHTTTTTEEEE
T ss_pred c----------cccCHHHHHHHHHhCcccEEEc
Confidence 1 112345888888877 68875
No 195
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.10 E-value=2.4e-10 Score=106.43 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=75.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++-.+......+. . .
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~-----------------~---~----- 103 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTA-----------------S---K----- 103 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC------------------C---C-----
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccc-----------------c---c-----
Confidence 56799999999999999999997 4799999999999766533221100000 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh---------HHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN---------IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n---------i~~yl~~I~~~LKpGG~wIN 314 (394)
..-.++.++.+|+.+........+.+|.|+.+| -|.... -.++++.+.++|||||+++-
T Consensus 104 ------~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 104 ------HGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp ------STTTTEEEEECCTTSCGGGTSCTTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------cCCCcEEEEeccHHHHHHHhccccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 001247889999877321113357899988553 222100 03789999999999999985
No 196
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.09 E-value=1.4e-10 Score=121.64 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=71.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
.+.+|||+|||.|.++..||++|+.|+|+|+|..||..|+-- +.+..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~---a~~~~------------------------------ 112 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRAL---AEENP------------------------------ 112 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HHTST------------------------------
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHH---HHhcC------------------------------
Confidence 457999999999999999999999999999999999887721 11100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHH--HHHHHHHHhccCCcEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIV--EYIEIISRILKDGGVW 312 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~--~yl~~I~~~LKpGG~w 312 (394)
..++.|..++..++.. +...++||+|+++-.|...++.. ..+..+.+.|+++|.-
T Consensus 113 ------~~~~~~~~~~~~~~~~-~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~ 169 (569)
T 4azs_A 113 ------DFAAEFRVGRIEEVIA-ALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQA 169 (569)
T ss_dssp ------TSEEEEEECCHHHHHH-HCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSE
T ss_pred ------CCceEEEECCHHHHhh-hccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccce
Confidence 1137889999887632 12357899999886555444432 2233455555555543
No 197
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.08 E-value=6.4e-10 Score=101.19 Aligned_cols=105 Identities=16% Similarity=0.072 Sum_probs=76.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..++-.+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 117 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA------------------------------- 117 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-------------------------------
Confidence 4569999999999999999986 679999999999997766333210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-CCCC--CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYS-DPSQ--VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~-~~~~--~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~G 316 (394)
....++.++.+|+.+... .+.. .++||+|+...- ..+...+++.+.++|||||++|-..
T Consensus 118 -------g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 118 -------EAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred -------CCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 011247889999876421 0001 168999976322 3456789999999999999998544
No 198
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.07 E-value=2.5e-10 Score=105.46 Aligned_cols=103 Identities=16% Similarity=0.076 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..++..+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 108 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN------------------------------- 108 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 679999999999997766433210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-C-----------CCCC--CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYS-D-----------PSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~-~-----------~~~~--~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...+++.+..+|+.+... . .+.. ++||+|+..+. .++..++++.+.++|||||++|
T Consensus 109 -------g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 109 -------GLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHHHHHcCCCeEEE
Confidence 001236778888765311 0 0112 68999987643 4567799999999999999998
Q ss_pred E
Q 016155 314 N 314 (394)
Q Consensus 314 N 314 (394)
-
T Consensus 179 ~ 179 (239)
T 2hnk_A 179 A 179 (239)
T ss_dssp E
T ss_pred E
Confidence 5
No 199
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.07 E-value=5.4e-10 Score=104.04 Aligned_cols=112 Identities=13% Similarity=0.105 Sum_probs=81.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
++..|.... +..+||++|||+|..+..||+. +..|+++|+|..|+..++-.+...
T Consensus 61 ~l~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~---------------- 118 (237)
T 3c3y_A 61 LMSFVLKLV------NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA---------------- 118 (237)
T ss_dssp HHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 556655543 4569999999999999999987 789999999999997766333210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CCC---CCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPS---QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 308 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~-~~~---~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKp 308 (394)
...+++.++.||+.++.. .+. ..++||+|+... ...+...|++.+.++|||
T Consensus 119 ----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~p 173 (237)
T 3c3y_A 119 ----------------------GVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVKV 173 (237)
T ss_dssp ----------------------TCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEE
T ss_pred ----------------------CCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcCC
Confidence 011247889999877421 000 147899997431 235678999999999999
Q ss_pred CcEEEE
Q 016155 309 GGVWIN 314 (394)
Q Consensus 309 GG~wIN 314 (394)
||++|-
T Consensus 174 GG~lv~ 179 (237)
T 3c3y_A 174 GGIVAY 179 (237)
T ss_dssp EEEEEE
T ss_pred CeEEEE
Confidence 999984
No 200
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.06 E-value=2.6e-10 Score=103.84 Aligned_cols=101 Identities=17% Similarity=0.156 Sum_probs=73.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-------eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccc
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 243 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-------~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~ 243 (394)
++.+|||+|||+|.++..|++.+. .|+|+|+|..|+..++..+.... .. .
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~-------------------~ 136 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK----PE-------------------L 136 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC----GG-------------------G
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC----cc-------------------c
Confidence 567999999999999999999865 99999999999977663322100 00 0
Q ss_pred cccCCCCCCCCCCCCceeEEeccccccc----CCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 244 VSIPDIHPASAGITEGFSMCGGDFVEVY----SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 244 v~iPDv~p~~~~~~~~ls~~~GDf~ely----~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
+ ...++.+..+|+.+.. . ..+.||+|+....+.. +++.+.++|||||++|-
T Consensus 137 ~-----------~~~~v~~~~~d~~~~~~~~~~---~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 137 L-----------KIDNFKIIHKNIYQVNEEEKK---ELGLFDAIHVGASASE------LPEILVDLLAENGKLII 191 (227)
T ss_dssp G-----------SSTTEEEEECCGGGCCHHHHH---HHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEE
T ss_pred c-----------ccCCEEEEECChHhcccccCc---cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEE
Confidence 0 0124788899987743 2 2468999987765543 35888999999999985
No 201
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.06 E-value=2.4e-10 Score=110.17 Aligned_cols=121 Identities=12% Similarity=0.154 Sum_probs=75.7
Q ss_pred CCCeEEEecCCCCh----hHHHHHHc------CCeEEEEeCCHHHHHHHhhhhhccccccccccccccc----------c
Q 016155 171 SPPACLVPGAGLGR----LALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH----------S 230 (394)
Q Consensus 171 ~~~~VLvpGCGlGR----La~eLA~~------Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~----------~ 230 (394)
++.+|||+|||+|. +|..|+.. |+.|+|+|+|..||..|+-- +||.-. .
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~-----------~y~~~~~~~~~~~~~~~ 173 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG-----------IYRLSELKTLSPQQLQR 173 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT-----------EEEGGGGTTSCHHHHHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc-----------CCchhhhhcCCHHHHHH
Confidence 45799999999999 66666665 47999999999999877621 111000 0
Q ss_pred -ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhc
Q 016155 231 -NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRIL 306 (394)
Q Consensus 231 -~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f---FlDta~ni~~yl~~I~~~L 306 (394)
|.......+. .+.+ .+ ....++.|..+|+.+... + ..+.||+|++.. |++ .+...+.++.++++|
T Consensus 174 ~f~~~~~~~~~--~~~v---~~---~lr~~V~F~~~dl~~~~~-~-~~~~fDlI~crnvliyf~-~~~~~~vl~~~~~~L 242 (274)
T 1af7_A 174 YFMRGTGPHEG--LVRV---RQ---ELANYVEFSSVNLLEKQY-N-VPGPFDAIFCRNVMIYFD-KTTQEDILRRFVPLL 242 (274)
T ss_dssp HEEECCTTSCS--EEEE---CH---HHHTTEEEEECCTTCSSC-C-CCCCEEEEEECSSGGGSC-HHHHHHHHHHHGGGE
T ss_pred HhhccccCCCC--ceee---ch---hhcccCeEEecccCCCCC-C-cCCCeeEEEECCchHhCC-HHHHHHHHHHHHHHh
Confidence 0000000000 0000 00 011358999999887311 1 146899999864 344 344678999999999
Q ss_pred cCCcEEE
Q 016155 307 KDGGVWI 313 (394)
Q Consensus 307 KpGG~wI 313 (394)
||||+++
T Consensus 243 ~pgG~L~ 249 (274)
T 1af7_A 243 KPDGLLF 249 (274)
T ss_dssp EEEEEEE
T ss_pred CCCcEEE
Confidence 9999998
No 202
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.06 E-value=4.8e-10 Score=101.61 Aligned_cols=152 Identities=14% Similarity=0.041 Sum_probs=95.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+++.++++ ... +++.+|||+|||+|.++..||+++..|+|+|+|..+.
T Consensus 12 KL~ei~~~~-~~~--~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~---------------------------- 60 (191)
T 3dou_A 12 KLEFLLDRY-RVV--RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE---------------------------- 60 (191)
T ss_dssp HHHHHHHHH-CCS--CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC----------------------------
T ss_pred HHHHHHHHc-CCC--CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc----------------------------
Confidence 355555543 211 2578999999999999999999999999999996210
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCC-----CC---CCCccEEEEecccCC--------h---hhH
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP-----SQ---VGAWDAVVTCFFIDT--------A---HNI 295 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~-----~~---~~~fD~VvT~fFlDt--------a---~ni 295 (394)
..++.++.||+++..... .. .++||+|++....++ . ...
T Consensus 61 ----------------------~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~ 118 (191)
T 3dou_A 61 ----------------------IAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIG 118 (191)
T ss_dssp ----------------------CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHH
T ss_pred ----------------------CCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHH
Confidence 013678889987642100 00 148999998532221 1 123
Q ss_pred HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccc
Q 016155 296 VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYF 375 (394)
Q Consensus 296 ~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~ 375 (394)
...++.+.++|||||.+|-. .| .. -...++...++. .|+-++..... .+ +....
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k---~~--~~-----------~~~~~~~~~l~~-~F~~v~~~kP~---as------R~~s~ 172 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLK---QF--QG-----------DMTNDFIAIWRK-NFSSYKISKPP---AS------RGSSS 172 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEE---EE--CS-----------THHHHHHHHHGG-GEEEEEEECC---------------CC
T ss_pred HHHHHHHHHHccCCCEEEEE---Ec--CC-----------CCHHHHHHHHHH-hcCEEEEECCC---Cc------cCCCc
Confidence 46788889999999999841 11 10 124677777755 58777643221 11 12336
Q ss_pred eEEEEEEEcC
Q 016155 376 TAFWTMRKKS 385 (394)
Q Consensus 376 ~~f~va~K~~ 385 (394)
..|+||++..
T Consensus 173 E~y~v~~~~~ 182 (191)
T 3dou_A 173 EIYIMFFGFK 182 (191)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEeeec
Confidence 6788988764
No 203
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.04 E-value=8.2e-10 Score=108.43 Aligned_cols=134 Identities=15% Similarity=0.152 Sum_probs=92.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
...+|||+|||+|.++..|+++ +..++++|+ ..|+. .+. . .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~-------~a~-------------------------~--~-- 235 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVG-------NLT-------------------------G--N-- 235 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHS-------SCC-------------------------C--C--
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHh-------hcc-------------------------c--C--
Confidence 4569999999999999999998 467999999 57862 110 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccC---CcEEEEecCcch---
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKD---GGVWINLGPLLY--- 320 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~n--i~~yl~~I~~~LKp---GG~wIN~GPLly--- 320 (394)
.++.+..+||.+ . .| .||+|+....|....+ ....|++++++||| ||++|-..+..-
T Consensus 236 ---------~~v~~~~~d~~~-~-~~----~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 300 (358)
T 1zg3_A 236 ---------ENLNFVGGDMFK-S-IP----SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETS 300 (358)
T ss_dssp ---------SSEEEEECCTTT-C-CC----CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTC
T ss_pred ---------CCcEEEeCccCC-C-CC----CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCC
Confidence 127889999987 2 22 4999998876665444 55999999999999 998885332210
Q ss_pred ------hhh---hccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 321 ------HFA---DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 321 ------h~~---~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.+. +..-.......+.+.+|++++++++||++++..
T Consensus 301 ~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 301 DDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred ccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 000 000000000235699999999999999998865
No 204
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.02 E-value=1e-09 Score=101.16 Aligned_cols=108 Identities=17% Similarity=0.055 Sum_probs=75.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
+...+.+.+.. .++.+|||+|||+|.++..|++++ ..|+|+|+|..|+..++..+...
T Consensus 79 ~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 137 (235)
T 1jg1_A 79 MVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA------------------ 137 (235)
T ss_dssp HHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc------------------
Confidence 44444444432 256799999999999999999997 89999999999997766332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
. -.++.+..+|+..-.. ..+.||+|+...-+.... +.+.++|||||++|-
T Consensus 138 --------~-------------~~~v~~~~~d~~~~~~---~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 138 --------G-------------VKNVHVILGDGSKGFP---PKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLII 187 (235)
T ss_dssp --------T-------------CCSEEEEESCGGGCCG---GGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEE
T ss_pred --------C-------------CCCcEEEECCcccCCC---CCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEE
Confidence 0 0126788888733221 124599999876554332 478899999999984
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.01 E-value=7.9e-10 Score=100.60 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=72.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|.++..|+++ | ..|+|+|+|..|+..++..+.... +..
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--------------------------~~~- 129 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD--------------------------PTL- 129 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC--------------------------THH-
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc--------------------------ccc-
Confidence 5679999999999999999987 4 689999999999976653321100 000
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.+..+|+.+... ..+.||+|+....+.. .++.+.++|||||++|-
T Consensus 130 -------~~~~~v~~~~~d~~~~~~---~~~~fD~i~~~~~~~~------~~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 130 -------LSSGRVQLVVGDGRMGYA---EEAPYDAIHVGAAAPV------VPQALIDQLKPGGRLIL 180 (226)
T ss_dssp -------HHTSSEEEEESCGGGCCG---GGCCEEEEEECSBBSS------CCHHHHHTEEEEEEEEE
T ss_pred -------cCCCcEEEEECCcccCcc---cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEE
Confidence 001237788899876432 2468999987655432 34688999999999985
No 206
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.01 E-value=1.5e-09 Score=107.20 Aligned_cols=109 Identities=21% Similarity=0.218 Sum_probs=77.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+|+++ +..|+++|+|..|+..++--+.... . .+.
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~--~----------------------gl~--- 172 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA--I----------------------GYE--- 172 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH--G----------------------GGG---
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--c----------------------ccC---
Confidence 4579999999999999999988 4689999999999987763221000 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc--cCChhh--HHHHHHHHHHhccCCcEEEEe
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHN--IVEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fF--lDta~n--i~~yl~~I~~~LKpGG~wIN~ 315 (394)
..++.++.+|+.++.. ....++||+|++..+ +..+.. ..++++.++++|||||+++..
T Consensus 173 --------~~rv~~~~~D~~~~l~-~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 173 --------DPRVNLVIGDGVAFLK-NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp --------STTEEEEESCHHHHHH-TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred --------CCcEEEEECCHHHHHH-hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 1247889999877421 112478999998654 222222 358999999999999999963
No 207
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.01 E-value=9.4e-10 Score=107.24 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=77.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+++++ +..|+++|+|..|+..++-.+..... . .+.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~----------------------~~~--- 130 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-G----------------------AFD--- 130 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-T----------------------GGG---
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-c----------------------ccc---
Confidence 4579999999999999999998 56899999999999776632210000 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-----hhh--HHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHN--IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt-----a~n--i~~yl~~I~~~LKpGG~wIN 314 (394)
..++.++.+|+.+... ...++||+|+...+... +.. ..++++.++++|||||+++.
T Consensus 131 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 131 --------DPRAVLVIDDARAYLE--RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp --------CTTEEEEESCHHHHHH--HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred --------CCceEEEEchHHHHHH--hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEE
Confidence 1247889999887421 12578999998765432 122 36899999999999999984
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.00 E-value=5.3e-09 Score=103.95 Aligned_cols=127 Identities=13% Similarity=0.081 Sum_probs=88.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+| |+|.++..+|.+|. .|+|+|+|..|+..++..+...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-------------------------------- 218 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-------------------------------- 218 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 467999999 99999999999985 8999999999998776322110
Q ss_pred CCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 016155 249 IHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 327 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~e-ly~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g 327 (394)
... ++.++.+|+.+ +.. ...++||+|++.--.... .+..+++.++++|||||.++-+. ...
T Consensus 219 ------g~~-~v~~~~~D~~~~l~~--~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~-----~~~--- 280 (373)
T 2qm3_A 219 ------GYE-DIEIFTFDLRKPLPD--YALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFG-----ITR--- 280 (373)
T ss_dssp ------TCC-CEEEECCCTTSCCCT--TTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEE-----ECT---
T ss_pred ------CCC-CEEEEEChhhhhchh--hccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEE-----Eec---
Confidence 001 37889999987 321 124689999976321111 36789999999999999542111 000
Q ss_pred CCCCccccCCH---HHHHHHHH-hCCCEEEE
Q 016155 328 QEDEMSIELSL---EDVKRVAL-HYGFEFEK 354 (394)
Q Consensus 328 ~~~~~~ieLS~---eEl~~ll~-~~GF~ii~ 354 (394)
..-+. +++.+++. +.||++..
T Consensus 281 ------~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 281 ------RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp ------TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred ------CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 01234 77888888 89998865
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=8.9e-10 Score=97.54 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=64.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C----------CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G----------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 239 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G----------f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~ 239 (394)
++.+|||+|||+|.++..|+++ | ..|+|+|+|..+. +
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~-------------------------- 69 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------L-------------------------- 69 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------C--------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc------C--------------------------
Confidence 5679999999999999999998 5 6899999998320 0
Q ss_pred CccccccCCCCCCCCCCCCceeEE-ecccccccCC-----CCCCCCccEEEEecccCC----hhhH-------HHHHHHH
Q 016155 240 QLRPVSIPDIHPASAGITEGFSMC-GGDFVEVYSD-----PSQVGAWDAVVTCFFIDT----AHNI-------VEYIEII 302 (394)
Q Consensus 240 qlr~v~iPDv~p~~~~~~~~ls~~-~GDf~ely~~-----~~~~~~fD~VvT~fFlDt----a~ni-------~~yl~~I 302 (394)
.++.++ .+|+.+.... ....++||+|++.+-++. ..+. ...++.+
T Consensus 70 ------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 70 ------------------EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT 131 (196)
T ss_dssp ------------------TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHH
Confidence 013445 5565442100 011358999998653222 1111 4789999
Q ss_pred HHhccCCcEEEE
Q 016155 303 SRILKDGGVWIN 314 (394)
Q Consensus 303 ~~~LKpGG~wIN 314 (394)
+++|||||++|-
T Consensus 132 ~~~LkpgG~lv~ 143 (196)
T 2nyu_A 132 PDILQPGGTFLC 143 (196)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHhcCCCEEEE
Confidence 999999999985
No 210
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.00 E-value=3.3e-09 Score=105.44 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=92.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccc
Q 016155 154 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 230 (394)
Q Consensus 154 ~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~ 230 (394)
..+.+.+.+.+... ++.+|||||||+|.++..++++ +..++|+|++..|+..+
T Consensus 25 ~~l~~~~~~~~~~~---~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------------- 80 (421)
T 2ih2_A 25 PEVVDFMVSLAEAP---RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------------- 80 (421)
T ss_dssp HHHHHHHHHHCCCC---TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------
T ss_pred HHHHHHHHHhhccC---CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------
Confidence 45777777776532 4569999999999999999984 57999999999885210
Q ss_pred ccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC-C--------hhhH----
Q 016155 231 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-T--------AHNI---- 295 (394)
Q Consensus 231 ~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD-t--------a~ni---- 295 (394)
.++.++.+|+.+... .+.||+|+++ |+-. . ....
T Consensus 81 ---------------------------~~~~~~~~D~~~~~~----~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~ 129 (421)
T 2ih2_A 81 ---------------------------PWAEGILADFLLWEP----GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLY 129 (421)
T ss_dssp ---------------------------TTEEEEESCGGGCCC----SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHH
T ss_pred ---------------------------CCCcEEeCChhhcCc----cCCCCEEEECcCccCcccccccccccCHHHHHHH
Confidence 126788999987532 4789999996 4311 1 1112
Q ss_pred --------------HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCC
Q 016155 296 --------------VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 350 (394)
Q Consensus 296 --------------~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF 350 (394)
..+++.+.++|||||+++-+-|--|-+. -..+++++.+.+.|+
T Consensus 130 ~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~------------~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 130 KKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL------------EDFALLREFLAREGK 186 (421)
T ss_dssp HHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC------------GGGHHHHHHHHHHSE
T ss_pred HHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC------------ccHHHHHHHHHhcCC
Confidence 2568899999999999987655433211 135778998888887
No 211
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.99 E-value=1.5e-09 Score=108.71 Aligned_cols=136 Identities=8% Similarity=0.069 Sum_probs=90.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++.-+.. +
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~----n----------------------------- 258 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA----N----------------------------- 258 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH----T-----------------------------
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 467999999999999999999997 799999999999776632110 0
Q ss_pred CCCCCCCCC-ceeEEecccccccC-CCCCCCCccEEEEe--cc-------cCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 250 HPASAGITE-GFSMCGGDFVEVYS-DPSQVGAWDAVVTC--FF-------IDTAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 250 ~p~~~~~~~-~ls~~~GDf~ely~-~~~~~~~fD~VvT~--fF-------lDta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
.... ++.++.+|+.++.. .....++||+|+.. +| .+......+.++.+.++|||||+++-...
T Consensus 259 -----~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~- 332 (385)
T 2b78_A 259 -----HLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN- 332 (385)
T ss_dssp -----TCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC-
T ss_pred -----CCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC-
Confidence 0011 47889999877421 00113589999964 22 22234455678888999999999974210
Q ss_pred chhhhhccCCCCCccccCCHH----HHHHHHHhCCCEEEEEeecc
Q 016155 319 LYHFADLYGQEDEMSIELSLE----DVKRVALHYGFEFEKEKTIE 359 (394)
Q Consensus 319 lyh~~~~~g~~~~~~ieLS~e----El~~ll~~~GF~ii~e~~i~ 359 (394)
+-.++.+ -+++.+..+|++++......
T Consensus 333 --------------~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~ 363 (385)
T 2b78_A 333 --------------AANMTVSQFKKQIEKGFGKQKHTYLDLQQLP 363 (385)
T ss_dssp --------------CTTSCHHHHHHHHHHHHTTCCCEEEEEECCC
T ss_pred --------------CCcCCHHHHHHHHHHHHHHcCCcEEEeCCCC
Confidence 1123334 45556668899966654433
No 212
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=1.3e-09 Score=107.54 Aligned_cols=103 Identities=18% Similarity=0.163 Sum_probs=76.2
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
+.+||++|||+|.++.+|+++ +..|+++|++..|+..++.-+.. +
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~-------------------------------~-- 136 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI-------------------------------P-- 136 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC-------------------------------C--
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc-------------------------------c--
Confidence 459999999999999999983 78999999999999776621100 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.+|..++.. ....++||+|++-.|.. ....+ .++++.++++|||||+++.
T Consensus 137 ------~~~rv~v~~~Da~~~l~-~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 137 ------RAPRVKIRVDDARMVAE-SFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp ------CTTTEEEEESCHHHHHH-TCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCceEEEECcHHHHHh-hccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01248899999887532 12257899999865432 12222 5899999999999999983
No 213
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.99 E-value=2.1e-09 Score=104.04 Aligned_cols=146 Identities=18% Similarity=0.170 Sum_probs=99.6
Q ss_pred CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccc
Q 016155 141 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETA 219 (394)
Q Consensus 141 WS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~ 219 (394)
|+.--..||.. + .+.+. ++.+|||+|||+|.++..+|++|. .|+|+|++..++..++.-+..
T Consensus 108 f~~~~~~er~r----i----~~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~---- 170 (278)
T 3k6r_A 108 FSPANVKERVR----M----AKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL---- 170 (278)
T ss_dssp CCGGGHHHHHH----H----HHHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----
T ss_pred EcCCcHHHHHH----H----HHhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHH----
Confidence 77666667753 3 33332 577999999999999999999995 899999999998655522110
Q ss_pred cccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHH
Q 016155 220 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYI 299 (394)
Q Consensus 220 ~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl 299 (394)
+ ...+.+.++.+|..++.. .+.||.|+.. ..+.-.+++
T Consensus 171 N----------------------------------~v~~~v~~~~~D~~~~~~----~~~~D~Vi~~----~p~~~~~~l 208 (278)
T 3k6r_A 171 N----------------------------------KVEDRMSAYNMDNRDFPG----ENIADRILMG----YVVRTHEFI 208 (278)
T ss_dssp T----------------------------------TCTTTEEEECSCTTTCCC----CSCEEEEEEC----CCSSGGGGH
T ss_pred c----------------------------------CCCCcEEEEeCcHHHhcc----ccCCCEEEEC----CCCcHHHHH
Confidence 0 112347889999988643 4789988743 222334778
Q ss_pred HHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 300 EIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 300 ~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
+...++|||||++.- |.+.... ....-..+.++++++..||++...
T Consensus 209 ~~a~~~lk~gG~ih~-----~~~~~e~-----~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 209 PKALSIAKDGAIIHY-----HNTVPEK-----LMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHEEEEEEEEE-----EEEEEGG-----GTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCCCEEEE-----Eeeeccc-----ccchhHHHHHHHHHHHcCCcEEEE
Confidence 888999999997641 2222110 012345688889999999987653
No 214
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.98 E-value=9.8e-10 Score=100.57 Aligned_cols=104 Identities=19% Similarity=0.170 Sum_probs=73.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CC-------eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCcc
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLR 242 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf-------~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr 242 (394)
++.+|||+|||+|.++..|+++ |. .|+|+|+|..|+..++..+.... ..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~------------------- 140 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD----RS------------------- 140 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH----HH-------------------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC----cc-------------------
Confidence 5679999999999999999984 53 89999999999977663322100 00
Q ss_pred ccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecC
Q 016155 243 PVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGP 317 (394)
Q Consensus 243 ~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN-~GP 317 (394)
.+. ..++.+..+|+.+.+. ..+.||+|+....+... ++.+.++|||||++|- +++
T Consensus 141 ~~~-----------~~~v~~~~~d~~~~~~---~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 141 MLD-----------SGQLLIVEGDGRKGYP---PNAPYNAIHVGAAAPDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHH-----------HTSEEEEESCGGGCCG---GGCSEEEEEECSCBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccC-----------CCceEEEECCcccCCC---cCCCccEEEECCchHHH------HHHHHHHhcCCCEEEEEEec
Confidence 000 0136788899876322 13689999877655432 3788999999999984 443
No 215
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.98 E-value=1.3e-09 Score=104.42 Aligned_cols=112 Identities=17% Similarity=0.209 Sum_probs=75.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++.+++++|. .|+++|+|..|+..++-.+ ... . .+ +..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~--~----------------------~l--~~~ 127 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KID--N----------------------GL--LEA 127 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTT--T----------------------TH--HHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhc--c----------------------cc--ccc
Confidence 457999999999999999999864 8999999999997766322 100 0 00 000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
. ......++.++.+|..+... . .++||+|+...+.. ....+ .++++.++++|||||+++.
T Consensus 128 ~--~~~~~~~v~~~~~D~~~~l~--~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 191 (281)
T 1mjf_A 128 M--LNGKHEKAKLTIGDGFEFIK--N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVT 191 (281)
T ss_dssp H--HTTCCSSEEEEESCHHHHHH--H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEE
T ss_pred c--ccCCCCcEEEEECchHHHhc--c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 0 00001247889999876422 1 47899999765421 12222 6899999999999999985
No 216
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.98 E-value=1.3e-09 Score=106.19 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=81.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHhhhhhcccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 228 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi 228 (394)
.|+.....+...+.. .++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..++..+.... ..+.+
T Consensus 89 ~~~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~l---- 159 (336)
T 2b25_A 89 TFPKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWR--DSWKL---- 159 (336)
T ss_dssp CCHHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHH--HHHTT----
T ss_pred cCHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhh--ccccc----
Confidence 444444444443322 25679999999999999999998 5 789999999999977663322100 00000
Q ss_pred ccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 016155 229 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 308 (394)
Q Consensus 229 ~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKp 308 (394)
| .+ . ....++.+..+|+.+... +...+.||+|+.... +...+++.+.++|||
T Consensus 160 ----n---------~~-----~----~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~~~~-----~~~~~l~~~~~~Lkp 211 (336)
T 2b25_A 160 ----S---------HV-----E----EWPDNVDFIHKDISGATE-DIKSLTFDAVALDML-----NPHVTLPVFYPHLKH 211 (336)
T ss_dssp ----T---------CS-----S----CCCCCEEEEESCTTCCC--------EEEEEECSS-----STTTTHHHHGGGEEE
T ss_pred ----c---------cc-----c----ccCCceEEEECChHHccc-ccCCCCeeEEEECCC-----CHHHHHHHHHHhcCC
Confidence 0 00 0 011348889999887531 123468999987432 223478999999999
Q ss_pred CcEEEEecC
Q 016155 309 GGVWINLGP 317 (394)
Q Consensus 309 GG~wIN~GP 317 (394)
||++|-+.|
T Consensus 212 gG~lv~~~~ 220 (336)
T 2b25_A 212 GGVCAVYVV 220 (336)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999996544
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.97 E-value=2.1e-09 Score=103.17 Aligned_cols=108 Identities=16% Similarity=0.146 Sum_probs=77.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.++++.+ -.|+++|+|..|+..++-.+.... . ..
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~---------------------~---~~---- 129 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS---------------------C---GY---- 129 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS---------------------G---GG----
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhc---------------------c---cc----
Confidence 45799999999999999999883 689999999999977663221000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEEe
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWINL 315 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni--~~yl~~I~~~LKpGG~wIN~ 315 (394)
...++.++.+|+.+... ...++||+|+...+.. .+..+ .++++.++++|||||+++..
T Consensus 130 -------~~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 130 -------EDKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp -------GSTTEEEEESCHHHHHH--HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CCCcEEEEECChHHHHH--hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 01247889999877422 1257899999764422 23333 58999999999999999853
No 218
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.97 E-value=5.1e-09 Score=100.63 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=76.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.+.+.++.. ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+...
T Consensus 16 i~~~i~~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------- 73 (285)
T 1zq9_A 16 IINSIIDKAALR---PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGT------------------- 73 (285)
T ss_dssp HHHHHHHHTCCC---TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTS-------------------
T ss_pred HHHHHHHhcCCC---CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhc-------------------
Confidence 566666655432 5679999999999999999999999999999999997655221100
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh-hhHHHHH--------------H
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-HNIVEYI--------------E 300 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta-~ni~~yl--------------~ 300 (394)
....++.++.+|+.++.. ..||+|++..-.... +-+...+ +
T Consensus 74 -------------------~~~~~v~~~~~D~~~~~~-----~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qk 129 (285)
T 1zq9_A 74 -------------------PVASKLQVLVGDVLKTDL-----PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQR 129 (285)
T ss_dssp -------------------TTGGGEEEEESCTTTSCC-----CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEH
T ss_pred -------------------CCCCceEEEEcceecccc-----hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhH
Confidence 001247889999987532 379999987422211 1122333 2
Q ss_pred HH--HHhccCCcEEE
Q 016155 301 II--SRILKDGGVWI 313 (394)
Q Consensus 301 ~I--~~~LKpGG~wI 313 (394)
++ .++|||||.+.
T Consensus 130 Eva~r~vlkPGg~~y 144 (285)
T 1zq9_A 130 EFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHHHHHCCTTCTTC
T ss_pred HHHHHHhcCCCCccc
Confidence 33 36999999763
No 219
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.97 E-value=6.2e-10 Score=106.54 Aligned_cols=99 Identities=8% Similarity=0.001 Sum_probs=68.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..+|++ ..|+|+|+|. |+.. +.+. + ++.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~-------a~~~-----------------------~--~~~-- 117 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVG-------GHEV-----------------------P--RIT-- 117 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCS-------SCCC-----------------------C--CCC--
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhh-------hhhh-----------------------h--hhh--
Confidence 5679999999999999999999 7899999998 7411 0000 0 000
Q ss_pred CCCCCCCCceeEE--ecccccccCCCCCCCCccEEEEecccCChh----h---HHHHHHHHHHhccCCc--EEEE
Q 016155 251 PASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFFIDTAH----N---IVEYIEIISRILKDGG--VWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~--~GDf~ely~~~~~~~~fD~VvT~fFlDta~----n---i~~yl~~I~~~LKpGG--~wIN 314 (394)
...+.++.++ .+|+.++. .++||+|++.+- .... + ....|+.++++||||| .||-
T Consensus 118 ---~~~~~~v~~~~~~~D~~~l~-----~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 118 ---ESYGWNIVKFKSRVDIHTLP-----VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ---CBTTGGGEEEECSCCTTTSC-----CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---hccCCCeEEEecccCHhHCC-----CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 0011247888 89998753 478999998643 2111 1 1237899999999999 8884
No 220
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.96 E-value=8.6e-10 Score=112.22 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=94.6
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCC------CChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhcccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAG------LGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEW 222 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCG------lGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~ 222 (394)
.|.++.+.+.+.+.. ++.+|||+||| +|..+..+++. +..|+|+|+|..|.. +
T Consensus 201 ~y~~~Ye~lL~~l~~----~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------~-------- 262 (419)
T 3sso_A 201 WFTPHYDRHFRDYRN----QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------D-------- 262 (419)
T ss_dssp BCHHHHHHHHGGGTT----SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------C--------
T ss_pred hHHHHHHHHHHhhcC----CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------c--------
Confidence 466677666554432 46799999999 88888888765 679999999998830 0
Q ss_pred ccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCC---CCCCCCccEEEEecccCChhhHHHHH
Q 016155 223 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYI 299 (394)
Q Consensus 223 ~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~---~~~~~~fD~VvT~fFlDta~ni~~yl 299 (394)
..++.++.||+.++... ....++||+|++.. .....+...+|
T Consensus 263 ----------------------------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL 307 (419)
T 3sso_A 263 ----------------------------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSF 307 (419)
T ss_dssp ----------------------------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHH
Confidence 02378899998875210 00147899998753 33446788999
Q ss_pred HHHHHhccCCcEEEEecCcchhhhhccCCCC--CccccCCHHHHHHHHHhCCCE
Q 016155 300 EIISRILKDGGVWINLGPLLYHFADLYGQED--EMSIELSLEDVKRVALHYGFE 351 (394)
Q Consensus 300 ~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~--~~~ieLS~eEl~~ll~~~GF~ 351 (394)
++++++|||||++|.... ...|-..+++.. ...-.-..+-+++++..+...
T Consensus 308 ~el~rvLKPGGvlVi~Dl-~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 308 AALFPHVRPGGLYVIEDM-WTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp HHHGGGEEEEEEEEEECG-GGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred HHHHHhcCCCeEEEEEec-ccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 999999999999996332 222221222111 011223456677777766543
No 221
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.96 E-value=2e-09 Score=104.28 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=105.5
Q ss_pred HHHHHHhhcCcc--cChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCC--ChhHHHHHHc---CCeEEEEeCCHH
Q 016155 132 CIIRNIVRDWAA--EGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGL--GRLALEISHL---GFISQGNEFSYY 204 (394)
Q Consensus 132 ~~L~q~~RDWS~--eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGl--GRLa~eLA~~---Gf~v~G~D~S~~ 204 (394)
..-.++.+-|.. ....+-...+...+.+|... ....+|||+|||+ |....++|++ +..|+|+|.|..
T Consensus 43 ~~~~~~~~~~P~~~~~a~~nr~fl~rav~~l~~~------~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~ 116 (277)
T 3giw_A 43 EAGDAMSREWPALPVHMRANRDWMNRAVAHLAKE------AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHT------SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccc------cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChH
Confidence 444455555553 22222223344455555421 1335899999998 5566777764 789999999999
Q ss_pred HHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEeccccccc---CCCCCCCCcc
Q 016155 205 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY---SDPSQVGAWD 281 (394)
Q Consensus 205 ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely---~~~~~~~~fD 281 (394)
||..++-.+... ...++.|+.+|+.++. ..+...+.||
T Consensus 117 mLa~Ar~~l~~~---------------------------------------~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 117 VLTLSQGLLAST---------------------------------------PEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp HHHTTHHHHCCC---------------------------------------SSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred HHHHHHHHhccC---------------------------------------CCCcEEEEEecccChhhhhcccccccccC
Confidence 997666433110 0124789999998752 1010023454
Q ss_pred -----EEEEe---cccCChhhHHHHHHHHHHhccCCcEEEE--ecCcch-h--------hhhccCCCCCccccCCHHHHH
Q 016155 282 -----AVVTC---FFIDTAHNIVEYIEIISRILKDGGVWIN--LGPLLY-H--------FADLYGQEDEMSIELSLEDVK 342 (394)
Q Consensus 282 -----~VvT~---fFlDta~ni~~yl~~I~~~LKpGG~wIN--~GPLly-h--------~~~~~g~~~~~~ieLS~eEl~ 342 (394)
+|+.+ .||....+...+|+++++.|+|||+++- +.+-.- + |.. .+ .+ ....|.+||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~-~g-~p--~~~rs~~ei~ 233 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA-RN-MP--MRLRTHAEAE 233 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH-TT-CC--CCCCCHHHHH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh-cC-CC--CccCCHHHHH
Confidence 45544 3676665578999999999999999984 222100 0 111 12 22 3356999999
Q ss_pred HHHHhCCCEEEEE
Q 016155 343 RVALHYGFEFEKE 355 (394)
Q Consensus 343 ~ll~~~GF~ii~e 355 (394)
+++. ||++++.
T Consensus 234 ~~f~--GlelveP 244 (277)
T 3giw_A 234 EFFE--GLELVEP 244 (277)
T ss_dssp HTTT--TSEECTT
T ss_pred HHhC--CCcccCC
Confidence 9994 9998873
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.96 E-value=1.7e-09 Score=105.20 Aligned_cols=107 Identities=21% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+|++++ ..|+++|+|..|+..++--+.... . .+.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~--~----------------------~~~--- 147 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA--I----------------------GYS--- 147 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH--G----------------------GGG---
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh--c----------------------ccC---
Confidence 45799999999999999999985 689999999999977663221000 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--Chh--hHHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAH--NIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~--ni~~yl~~I~~~LKpGG~wIN 314 (394)
..++.++.+|+.+... ...++||+|++..+.. .+. ...++++.++++|||||+++.
T Consensus 148 --------~~rv~v~~~Da~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 148 --------SSKLTLHVGDGFEFMK--QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp --------CTTEEEEESCHHHHHH--TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEECcHHHHHh--hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 1247889999877422 1257899999764321 111 124789999999999999985
No 223
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.96 E-value=5.6e-09 Score=101.71 Aligned_cols=130 Identities=11% Similarity=0.009 Sum_probs=88.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||++ +..|+|+|+|..|+..++-.+... .+
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~--------------------------g~--- 168 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL--------------------------GV--- 168 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh--------------------------CC---
Confidence 5679999999999999999986 368999999999997665332110 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---c---ccCChh---------h-------HHHHHHHHHHh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---F---FIDTAH---------N-------IVEYIEIISRI 305 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---f---FlDta~---------n-------i~~yl~~I~~~ 305 (394)
.++.++.+|+.++.. ..+.||+|+.. . .+...+ + ..++|+.++++
T Consensus 169 ----------~~v~~~~~D~~~~~~---~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 169 ----------LNVILFHSSSLHIGE---LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp ----------CSEEEESSCGGGGGG---GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CeEEEEECChhhccc---ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 136788899887642 24689999863 1 122111 1 14789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
|||||++|-..-- .+ -+=+.+.+..++++.||+++..
T Consensus 236 LkpGG~lv~stcs-~~------------~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 236 LKPGGILVYSTCS-LE------------PEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EEEEEEEEEEESC-CC------------GGGTHHHHHHHHHHSSEEEECC
T ss_pred CCCCCEEEEEeCC-CC------------hHHhHHHHHHHHhcCCCEEecC
Confidence 9999999831100 00 0114456778888899988753
No 224
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.96 E-value=2.3e-09 Score=103.67 Aligned_cols=107 Identities=15% Similarity=0.109 Sum_probs=74.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+++++ | ..|+++|+|..|+..++--+..... .+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~------------------------~~~--- 142 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSC------------------------GFD--- 142 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHG------------------------GGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc------------------------ccC---
Confidence 3579999999999999999998 3 6899999999999776632210000 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC---Chhh--HHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAHN--IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD---ta~n--i~~yl~~I~~~LKpGG~wIN 314 (394)
..++.++.+|+.+... ...++||+|+...+-. .... ..++++.++++|||||+++.
T Consensus 143 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 143 --------DPRAEIVIANGAEYVR--KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp --------CTTEEEEESCHHHHGG--GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCceEEEECcHHHHHh--hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1247889999877422 1247899999754321 1111 26899999999999999985
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.94 E-value=1.7e-09 Score=103.54 Aligned_cols=107 Identities=17% Similarity=0.144 Sum_probs=76.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.+++++ | -.|+++|++..|+..++--+.... + ..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~---------------~---------~~---- 126 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIA---------------G---------KL---- 126 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHH---------------T---------TT----
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhc---------------c---------cc----
Confidence 4579999999999999999998 5 689999999999977763221000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhh--HHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHN--IVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDt--a~n--i~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.+|+.+... ...++||+|+.-.+... +.. ..++++.++++|||||+++.
T Consensus 127 -------~~~rv~v~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 127 -------DDPRVDVQVDDGFMHIA--KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp -------TSTTEEEEESCSHHHHH--TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCceEEEECcHHHHHh--hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01247889999887432 12478999997543211 111 25899999999999999985
No 226
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.93 E-value=2.7e-09 Score=104.54 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++.++++. +..|+++|+|..|+..++..+... ++ .+.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~---------------~~---------~~~--- 168 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI---------------SC---------GYE--- 168 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT---------------SG---------GGG---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh---------------cc---------ccC---
Confidence 4569999999999999999988 478999999999997766321100 00 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFl--Dta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
..++.++.+|+.+... ...++||+|++..+- .....+ .++++.++++|||||+++.
T Consensus 169 --------~~~v~~~~~D~~~~l~--~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 169 --------DKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp --------STTEEEEESCHHHHHH--HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEEccHHHHHh--hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1247899999877421 124789999976532 122333 6899999999999999985
No 227
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.93 E-value=2.2e-09 Score=105.12 Aligned_cols=107 Identities=18% Similarity=0.202 Sum_probs=73.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+||++|||+|.++.+|++. +..|+++|+|..|+..|+-.+.... . .+
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~---------------------~---~~---- 159 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMS---------------------C---GF---- 159 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTS---------------------G---GG----
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhc---------------------c---cc----
Confidence 4569999999999999999988 4689999999999977663211000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFl--Dta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.+|+.+... ...++||+|++..+- ..+..+ .++++.++++|||||+++.
T Consensus 160 -------~~~rv~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 160 -------SHPKLDLFCGDGFEFLK--NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp -------GCTTEEEECSCHHHHHH--HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEE
T ss_pred -------CCCCEEEEEChHHHHHH--hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 01247889999877421 124789999976542 112223 6899999999999999985
No 228
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.91 E-value=2.6e-09 Score=101.79 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=74.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|.++..+|+++- .|+|+|+|..|+..++..+.. + .
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----n----------------------~----- 167 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----N----------------------K----- 167 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH----T----------------------T-----
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C-----
Confidence 567999999999999999999965 899999999999766632210 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
-.++.++.||+.++ . . .+.||+|+...- .+..++++.+.++|||||+++-
T Consensus 168 --------l~~~~~~~~d~~~~-~--~-~~~~D~Vi~d~p----~~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 168 --------LNNVIPILADNRDV-E--L-KDVADRVIMGYV----HKTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp --------CSSEEEEESCGGGC-C--C-TTCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred --------CCCEEEEECChHHc-C--c-cCCceEEEECCc----ccHHHHHHHHHHHcCCCCEEEE
Confidence 01367899999886 3 1 578999976533 2566789999999999999873
No 229
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.90 E-value=6.3e-09 Score=101.42 Aligned_cols=97 Identities=8% Similarity=-0.022 Sum_probs=67.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeC----CHHHHHHHhhhhhccccccccccccccccccCCCCcccCcccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEF----SYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 246 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~----S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~i 246 (394)
++.+|||+|||+|.++..||++| .|+|+|+ |..|+. ... .+..
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~~~~-------~~~-----------------------~~~~-- 128 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPGHEE-------PIP-----------------------MSTY-- 128 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-------CCC-----------------------CCST--
T ss_pred CCCEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchhHHH-------HHH-----------------------hhhc--
Confidence 56799999999999999999995 8999999 554420 000 0000
Q ss_pred CCCCCCCCCCCCceeEEec-ccccccCCCCCCCCccEEEEecccCCh------hhHHHHHHHHHHhccCCcEEEE
Q 016155 247 PDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAWDAVVTCFFIDTA------HNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 247 PDv~p~~~~~~~~ls~~~G-Df~ely~~~~~~~~fD~VvT~fFlDta------~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...++.+..+ |++++. .++||+|++.+-..+. ......|+.+.++|||||.||.
T Consensus 129 ---------~~~~v~~~~~~D~~~l~-----~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 129 ---------GWNLVRLQSGVDVFFIP-----PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp ---------TGGGEEEECSCCTTTSC-----CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ---------CCCCeEEEeccccccCC-----cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 0124788888 887752 3689999986432211 1122578889999999999985
No 230
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.88 E-value=2.3e-08 Score=101.69 Aligned_cols=119 Identities=17% Similarity=0.211 Sum_probs=79.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHhhhhhccccc
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSSFILNHTETA 219 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---------------Gf~v~G~D~S~~ML~~s~filn~~~~~ 219 (394)
++++.+.+.+.. ..+.+|||||||+|.+...+++. +..++|+|++..|+..|+.-+..
T Consensus 158 ~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l---- 230 (445)
T 2okc_A 158 PLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL---- 230 (445)
T ss_dssp HHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH----
Confidence 455555554432 25679999999999999888863 47899999999999777632210
Q ss_pred cccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCCh-----
Q 016155 220 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTA----- 292 (394)
Q Consensus 220 ~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta----- 292 (394)
+.+. ..+..+..||++.... .+.||+|+++ |.....
T Consensus 231 ----------------------~g~~-----------~~~~~i~~gD~l~~~~----~~~fD~Iv~NPPf~~~~~~~~~~ 273 (445)
T 2okc_A 231 ----------------------HGIG-----------TDRSPIVCEDSLEKEP----STLVDVILANPPFGTRPAGSVDI 273 (445)
T ss_dssp ----------------------TTCC-----------SSCCSEEECCTTTSCC----SSCEEEEEECCCSSCCCTTCCCC
T ss_pred ----------------------hCCC-----------cCCCCEeeCCCCCCcc----cCCcCEEEECCCCCCcccccchh
Confidence 0000 0024678889876432 3589999987 322110
Q ss_pred ----------hhHHHHHHHHHHhccCCcEEEEecC
Q 016155 293 ----------HNIVEYIEIISRILKDGGVWINLGP 317 (394)
Q Consensus 293 ----------~ni~~yl~~I~~~LKpGG~wIN~GP 317 (394)
..-..+++.+.++|||||+++-+-|
T Consensus 274 ~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 274 NRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 1124789999999999999986555
No 231
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.87 E-value=2.8e-08 Score=97.37 Aligned_cols=125 Identities=16% Similarity=0.142 Sum_probs=86.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-------CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccc
Q 016155 171 SPPACLVPGAGLGRLALEISHLG-------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 243 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G-------f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~ 243 (394)
++.+|||||||+|.++..+++.. ..++|+|++..|+..|+..+... .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--------------------------g 183 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--------------------------R 183 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--------------------------T
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--------------------------C
Confidence 46799999999999999998775 67999999999997776322100 0
Q ss_pred cccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--c-ccCChh--------------hH-HHHHHHHHHh
Q 016155 244 VSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--F-FIDTAH--------------NI-VEYIEIISRI 305 (394)
Q Consensus 244 v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--f-FlDta~--------------ni-~~yl~~I~~~ 305 (394)
+ ++.+..||+++.. ..+.||+|+++ | ++.... +. ..+++.+.+.
T Consensus 184 ~--------------~~~i~~~D~l~~~----~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 245 (344)
T 2f8l_A 184 Q--------------KMTLLHQDGLANL----LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY 245 (344)
T ss_dssp C--------------CCEEEESCTTSCC----CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT
T ss_pred C--------------CceEEECCCCCcc----ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH
Confidence 0 1467888876632 24789999987 3 332211 12 2579999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCE
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFE 351 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ 351 (394)
|||||+++-+-|--+ +. .-..+++++.+.+.|+.
T Consensus 246 Lk~gG~~~~v~p~~~-~~-----------~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 246 TKPGGYLFFLVPDAM-FG-----------TSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp EEEEEEEEEEEEGGG-GG-----------STTHHHHHHHHHHHEEE
T ss_pred hCCCCEEEEEECchh-cC-----------CchHHHHHHHHHhCCeE
Confidence 999999886544221 11 11358899988887763
No 232
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.86 E-value=4.4e-09 Score=100.35 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=71.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
.+.+||++|||+|.++.++++.|-.|+++|++..|+..|+--+.. . ++ .+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~------------~---~~---------~~------ 121 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPH------------F---HE---------VK------ 121 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTT------------H---HH---------HH------
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh------------h---cc---------cc------
Confidence 456999999999999999998887899999999998544411100 0 00 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
...++.++.+|..++. ++||+|+... .+...+++.++++|||||+++.
T Consensus 122 -----~~~rv~~~~~D~~~~~------~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 122 -----NNKNFTHAKQLLDLDI------KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp -----TCTTEEEESSGGGSCC------CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEE
T ss_pred -----CCCeEEEEechHHHHH------hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEE
Confidence 0124788899987642 6799998752 2233599999999999999985
No 233
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.84 E-value=8.4e-09 Score=104.10 Aligned_cols=102 Identities=12% Similarity=0.097 Sum_probs=72.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+.. + .+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~----n----------------------g~------ 261 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALR----L----------------------GL------ 261 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H----------------------TC------
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHH----h----------------------CC------
Confidence 467999999999999999999999999999999999766632210 0 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCC-------hhhHHHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT-------AHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDt-------a~ni~~yl~~I~~~LKpGG~wIN 314 (394)
. ..+..+|+.++... ..+.||+|+.. +|... ..+..++++.+.++|||||+++-
T Consensus 262 ------~--~~~~~~D~~~~l~~--~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~ 324 (393)
T 4dmg_A 262 ------R--VDIRHGEALPTLRG--LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWL 324 (393)
T ss_dssp ------C--CEEEESCHHHHHHT--CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ------C--CcEEEccHHHHHHH--hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0 13457888775321 12449999864 23322 23345778888999999999983
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.84 E-value=1.3e-08 Score=98.62 Aligned_cols=96 Identities=18% Similarity=0.191 Sum_probs=66.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+... .
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~--------------------------~------- 88 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYE--------------------------G------- 88 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999999999999999999997665322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHH---------------HHHHHhccCCc
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYI---------------EIISRILKDGG 310 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-FlDta~ni~~yl---------------~~I~~~LKpGG 310 (394)
..++.++.+|+.++. .++||+|++.. |--+.+.+...+ +.+.++|+|+|
T Consensus 89 ------~~~v~~~~~D~~~~~-----~~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 89 ------YNNLEVYEGDAIKTV-----FPKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp ------CCCEEC----CCSSC-----CCCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred ------CCceEEEECchhhCC-----cccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 023678889988753 24799999763 222233345555 55778999988
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.83 E-value=1.8e-08 Score=100.72 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=77.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++..+.. +
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~----n----------------------------- 266 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL----N----------------------------- 266 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 456999999999999999999986 899999999999776632210 0
Q ss_pred CCCCCCC-CCceeEEecccccccCC-CCCCCCccEEEEe--ccc-------CChhhHHHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGI-TEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFI-------DTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~-~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~--fFl-------Dta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
.. ..++.++.+|+.++... +...++||+|+.. +|. +......+++..+.++|||||+++-
T Consensus 267 -----gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 267 -----KLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp -----TCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred -----CCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 00 11478899998775320 0013689999875 221 2225677899999999999999873
No 236
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.83 E-value=2.1e-08 Score=94.10 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=43.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~ 210 (394)
+++.+.+.++. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 18 ~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~ 69 (244)
T 1qam_A 18 NIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 69 (244)
T ss_dssp HHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 56666665542 25679999999999999999999999999999999996554
No 237
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.82 E-value=6.8e-08 Score=92.28 Aligned_cols=152 Identities=15% Similarity=0.073 Sum_probs=96.4
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccccccc
Q 016155 145 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNI 224 (394)
Q Consensus 145 g~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i 224 (394)
...||-.+|.++-..+-+. + .+.+|||+|||+|-|+..++ -+..++|.|+|..|+.+++..+...
T Consensus 85 STrerLp~ld~fY~~i~~~-~-----~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~-------- 149 (253)
T 3frh_A 85 STKERLAELDTLYDFIFSA-E-----TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREK-------- 149 (253)
T ss_dssp HHHHHGGGHHHHHHHHTSS-C-----CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHT--------
T ss_pred CHHHHhhhHHHHHHHHhcC-C-----CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhc--------
Confidence 3567777777777766655 2 46799999999999999988 7789999999999998777543210
Q ss_pred ccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHH
Q 016155 225 YPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEI 301 (394)
Q Consensus 225 ~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---fFlDta~ni~~yl~~ 301 (394)
+.++.+..+|+..... .+.||+|+.. -+|+...- .....
T Consensus 150 --------------------------------g~~~~~~v~D~~~~~~----~~~~DvvLllk~lh~LE~q~~--~~~~~ 191 (253)
T 3frh_A 150 --------------------------------DWDFTFALQDVLCAPP----AEAGDLALIFKLLPLLEREQA--GSAMA 191 (253)
T ss_dssp --------------------------------TCEEEEEECCTTTSCC----CCBCSEEEEESCHHHHHHHST--THHHH
T ss_pred --------------------------------CCCceEEEeecccCCC----CCCcchHHHHHHHHHhhhhch--hhHHH
Confidence 1126778888776432 4689999876 23433221 23447
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 302 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 302 I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+...|+++|++|++.-- ...|..+ .++=...+..+-.-...+.++.+.
T Consensus 192 ll~aL~~~~vvVsfPtk-----sl~Gr~~--gm~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 192 LLQSLNTPRMAVSFPTR-----SLGGRGK--GMEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHHCBCSEEEEEEECC------------------CHHHHHHHHSCTTEEEEEEE
T ss_pred HHHHhcCCCEEEEcChH-----HhcCCCc--chhhHHHHHHHHHhhccchhhhhe
Confidence 77899999999996410 0011121 344445444443335566766654
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.80 E-value=9.7e-09 Score=102.61 Aligned_cols=106 Identities=16% Similarity=0.119 Sum_probs=76.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++..+.. +
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~----n----------------------------- 263 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL----N----------------------------- 263 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c-----------------------------
Confidence 467999999999999999999987 899999999999766632210 0
Q ss_pred CCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEe--cccCCh-------hhHHHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDTA-------HNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~--fFlDta-------~ni~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.+|+.++... ....++||+|+.. +|.... .+..+++..+.++|||||+++-
T Consensus 264 -----~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 333 (396)
T 2as0_A 264 -----GVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVT 333 (396)
T ss_dssp -----TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred -----CCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 0012478899998775310 0014689999874 333222 4456788999999999998874
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.78 E-value=3.6e-08 Score=98.27 Aligned_cols=104 Identities=13% Similarity=0.014 Sum_probs=74.8
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCC
Q 016155 172 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 251 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p 251 (394)
+.+|||+|||+|.++..+|+.+..|+|+|+|..|+..++..+.. + .
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~----n----------------------~-------- 255 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARL----N----------------------G-------- 255 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHH----T----------------------T--------
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH----c----------------------C--------
Confidence 45899999999999999999988899999999999766632210 0 0
Q ss_pred CCCCCCCceeEEecccccccCC-CCCCCCccEEEEe--cccCC-------hhhHHHHHHHHHHhccCCcEEEE
Q 016155 252 ASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDT-------AHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 252 ~~~~~~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~--fFlDt-------a~ni~~yl~~I~~~LKpGG~wIN 314 (394)
. .++.++.+|+.++... ....++||+|+.. +|... .....+++..+.++|||||+++-
T Consensus 256 ----~-~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 256 ----L-GNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp ----C-TTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----C-CCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 0 1267899998775320 0014689999863 23221 14456788999999999999884
No 240
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.78 E-value=1.3e-08 Score=96.66 Aligned_cols=133 Identities=14% Similarity=-0.016 Sum_probs=86.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||++ | ..|+|+|+|..|+..++..+... .
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~--------------------------g---- 132 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM--------------------------G---- 132 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT--------------------------T----
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh--------------------------C----
Confidence 5679999999999999999983 5 78999999999997655322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEec--c-cC---------------ChhhHHHHHHHHHHhccC
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCF--F-ID---------------TAHNIVEYIEIISRILKD 308 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~f--F-lD---------------ta~ni~~yl~~I~~~LKp 308 (394)
. .++.++.+|+.++... ....+.||+|+..- . +- ......+.++.+.++|||
T Consensus 133 --------~-~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp 203 (274)
T 3ajd_A 133 --------V-LNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK 203 (274)
T ss_dssp --------C-CSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE
T ss_pred --------C-CcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 1377888998775320 00146899998651 1 11 112346889999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHh-CCCEEEEE
Q 016155 309 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEKE 355 (394)
Q Consensus 309 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~-~GF~ii~e 355 (394)
||++|-...-+. -+=+.+.+..++++ -+|+++..
T Consensus 204 gG~lv~stcs~~-------------~~ene~~v~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 204 DGELVYSTCSME-------------VEENEEVIKYILQKRNDVELIII 238 (274)
T ss_dssp EEEEEEEESCCC-------------TTSSHHHHHHHHHHCSSEEEECC
T ss_pred CCEEEEEECCCC-------------hHHhHHHHHHHHHhCCCcEEecC
Confidence 999984211100 01235566666754 57877653
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=2.5e-08 Score=107.61 Aligned_cols=140 Identities=12% Similarity=0.132 Sum_probs=93.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~-v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+|||+|||+|.++..+|+.|.. |+|+|+|..||..++--+.. + .+.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~----n----------------------gl~---- 588 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL----N----------------------GLT---- 588 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------TCC----
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------CCC----
Confidence 4679999999999999999999985 99999999999766522110 0 000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--ccc---------CChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFI---------DTAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFl---------Dta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
..++.++.+|+.++.. ...++||+|+.. +|. +...+..++++.+.++|||||+++-....
T Consensus 589 -------~~~v~~i~~D~~~~l~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 589 -------GRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp -------STTEEEEESCHHHHHH--HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -------ccceEEEecCHHHHHH--hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 1247899999988532 124789999864 232 22345667799999999999999831100
Q ss_pred chhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE--EeeccccCCCCc
Q 016155 319 LYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK--EKTIETTYTTNP 366 (394)
Q Consensus 319 lyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~--e~~i~~~Y~~d~ 366 (394)
..+.+. .+++.+.||+... ...++..+..++
T Consensus 660 -------------~~~~~~----~~~l~~~g~~~~~i~~~~lp~df~~~~ 692 (703)
T 3v97_A 660 -------------RGFRMD----LDGLAKLGLKAQEITQKTLSQDFARNR 692 (703)
T ss_dssp -------------TTCCCC----HHHHHHTTEEEEECTTTTCCGGGTTCS
T ss_pred -------------cccccC----HHHHHHcCCceeeeeeccCCCCCCCCC
Confidence 012333 3456778998544 234444444443
No 242
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.73 E-value=3e-08 Score=96.43 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=75.9
Q ss_pred CCCeEEEecC------CCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCc
Q 016155 171 SPPACLVPGA------GLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 241 (394)
Q Consensus 171 ~~~~VLvpGC------GlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~ql 241 (394)
++.+|||+|| |+|. ..++++ +..|+|+|+|.. + .
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~--------------------------- 105 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------S--------------------------- 105 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------C---------------------------
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------C---------------------------
Confidence 5679999999 4466 333332 479999999974 0 0
Q ss_pred cccccCCCCCCCCCCCCceeE-EecccccccCCCCCCCCccEEEEeccc--------CC---hhhHHHHHHHHHHhccCC
Q 016155 242 RPVSIPDIHPASAGITEGFSM-CGGDFVEVYSDPSQVGAWDAVVTCFFI--------DT---AHNIVEYIEIISRILKDG 309 (394)
Q Consensus 242 r~v~iPDv~p~~~~~~~~ls~-~~GDf~ely~~~~~~~~fD~VvT~fFl--------Dt---a~ni~~yl~~I~~~LKpG 309 (394)
++.+ +.||+.++.. .++||+|++.... +. ..-+.+.++.++++||||
T Consensus 106 -----------------~v~~~i~gD~~~~~~----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 106 -----------------DADSTLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp -----------------SSSEEEESCGGGCCC----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred -----------------CCEEEEECccccCCc----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 1456 8899987532 3689999986431 21 222457899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 310 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 310 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
|.++-.. + .. -..+++.+++++.||..++.
T Consensus 165 G~~v~~~---~--~~-----------~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 165 GSIAVKI---T--EH-----------SWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp EEEEEEE---C--SS-----------SCCHHHHHHHTTEEEEEEEE
T ss_pred cEEEEEE---e--cc-----------CCHHHHHHHHHHcCCcEEEE
Confidence 9998521 1 10 12358999999999986654
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.72 E-value=2.3e-08 Score=98.18 Aligned_cols=120 Identities=11% Similarity=0.063 Sum_probs=84.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++.. |+.+..|+|+|+|..|+..++..+.. +
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~----n------------------------------ 239 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKL----N------------------------------ 239 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHH----T------------------------------
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 467999999999999999 98777999999999999766532210 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
....++.++.+|+.++. ++||+|+. |......++++.+.++|||||+++-.. +. +
T Consensus 240 ----~l~~~v~~~~~D~~~~~------~~fD~Vi~----dpP~~~~~~l~~~~~~L~~gG~l~~~~-----~~------~ 294 (336)
T 2yx1_A 240 ----KLEHKIIPILSDVREVD------VKGNRVIM----NLPKFAHKFIDKALDIVEEGGVIHYYT-----IG------K 294 (336)
T ss_dssp ----TCTTTEEEEESCGGGCC------CCEEEEEE----CCTTTGGGGHHHHHHHEEEEEEEEEEE-----EE------S
T ss_pred ----CCCCcEEEEECChHHhc------CCCcEEEE----CCcHhHHHHHHHHHHHcCCCCEEEEEE-----ee------c
Confidence 01124788999988752 68999986 333334488999999999999887311 11 0
Q ss_pred CccccCCHHHHHHHHHhC-CCEEEEEe
Q 016155 331 EMSIELSLEDVKRVALHY-GFEFEKEK 356 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~-GF~ii~e~ 356 (394)
. .+++.+++.+. ||+++...
T Consensus 295 ----~--~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 295 ----D--FDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp ----S--SHHHHHHHHHHSEEEEEEEE
T ss_pred ----C--chHHHHHHHHhcCCcEEEEE
Confidence 1 34555666665 78876543
No 244
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.72 E-value=8.5e-09 Score=96.23 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=73.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.+.+.++. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++ +.
T Consensus 17 ~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~-------~~---------------- 70 (245)
T 1yub_A 17 VLNQIIKQLNL---KETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSS-------EK---------------- 70 (245)
T ss_dssp THHHHHHHCCC---CSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSS-------CT----------------
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHH-------HH----------------
Confidence 34444444432 25679999999999999999999999999999999963211 00
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHH----------H----
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEY----------I---- 299 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta~ni~~y----------l---- 299 (394)
+ ....++.++.+|+.++.. + ..++| .||++ |++.+ .-+... +
T Consensus 71 --------~----------~~~~~v~~~~~D~~~~~~-~-~~~~f-~vv~n~Py~~~~-~~~~~~~~~~~~~~~~lm~q~ 128 (245)
T 1yub_A 71 --------L----------KLNTRVTLIHQDILQFQF-P-NKQRY-KIVGNIPYHLST-QIIKKVVFESRASDIYLIVEE 128 (245)
T ss_dssp --------T----------TTCSEEEECCSCCTTTTC-C-CSSEE-EEEEECCSSSCH-HHHHHHHHHCCCEEEEEEEES
T ss_pred --------h----------ccCCceEEEECChhhcCc-c-cCCCc-EEEEeCCccccH-HHHHHHHhCCCCCeEEEEeeH
Confidence 0 001247889999988632 1 13578 55554 44432 223233 3
Q ss_pred HHHHHhccCCcEEEE
Q 016155 300 EIISRILKDGGVWIN 314 (394)
Q Consensus 300 ~~I~~~LKpGG~wIN 314 (394)
+.+.++|||||.+.-
T Consensus 129 e~a~rll~~~G~l~v 143 (245)
T 1yub_A 129 GFYKRTLDIHRTLGL 143 (245)
T ss_dssp SHHHHHHCGGGSHHH
T ss_pred HHHHHHhCCCCchhh
Confidence 679999999998763
No 245
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.65 E-value=2.4e-07 Score=94.44 Aligned_cols=131 Identities=14% Similarity=0.059 Sum_probs=86.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||.|..+..||.+ | ..|+|+|+|..|+..++..+... .
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~--------------------------g---- 308 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM--------------------------G---- 308 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------T----
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc--------------------------C----
Confidence 5679999999999999999985 3 68999999999997655322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---e--c-ccCCh---------hhH-------HHHHHHHHHh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---C--F-FIDTA---------HNI-------VEYIEIISRI 305 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT---~--f-FlDta---------~ni-------~~yl~~I~~~ 305 (394)
-.++.++.+|+.++.. ....+.||+|+. | + .+... .++ .+.++.+.++
T Consensus 309 ---------~~~v~~~~~D~~~~~~-~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 309 ---------IKIVKPLVKDARKAPE-IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARL 378 (450)
T ss_dssp ---------CCSEEEECSCTTCCSS-SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred ---------CCcEEEEEcChhhcch-hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0136778888877531 122368999985 2 1 22211 222 5789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhC-CCEEEE
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY-GFEFEK 354 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~-GF~ii~ 354 (394)
|||||++|-...-+. -+=+.+.+..++++. ||+++.
T Consensus 379 LkpGG~lvy~tcs~~-------------~~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 379 VKPGGRLLYTTCSIF-------------KEENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp EEEEEEEEEEESCCC-------------GGGTHHHHHHHHHHCSSCEECC
T ss_pred cCCCcEEEEEeCCCC-------------hhhHHHHHHHHHHhCCCCEEee
Confidence 999999983211100 011455677777765 788765
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.64 E-value=1.1e-07 Score=95.40 Aligned_cols=113 Identities=14% Similarity=0.190 Sum_probs=79.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC----------------------------------------Ce
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG----------------------------------------FI 195 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G----------------------------------------f~ 195 (394)
+...|.....- .++.+|||||||+|.++.++|..| ..
T Consensus 183 lAa~ll~~~~~---~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 183 LAAGLIYLTPW---KAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHTSCC---CTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHhhCC---CCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 44444444332 256789999999999999999886 46
Q ss_pred EEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCC
Q 016155 196 SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPS 275 (394)
Q Consensus 196 v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~ 275 (394)
|+|+|+|..|+..|+..+... ...+.+.+..+|+.++..
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~--------------------------------------gl~~~i~~~~~D~~~l~~--- 298 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIA--------------------------------------GVDEYIEFNVGDATQFKS--- 298 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHH--------------------------------------TCGGGEEEEECCGGGCCC---
T ss_pred EEEEECCHHHHHHHHHHHHHc--------------------------------------CCCCceEEEECChhhcCc---
Confidence 999999999998877432211 011247899999998643
Q ss_pred CCCCccEEEEe--cc--cCChhhHHHHHHHHHHhccC--CcEEE
Q 016155 276 QVGAWDAVVTC--FF--IDTAHNIVEYIEIISRILKD--GGVWI 313 (394)
Q Consensus 276 ~~~~fD~VvT~--fF--lDta~ni~~yl~~I~~~LKp--GG~wI 313 (394)
.++||+||+. |. +....++.+..+.+.+.||+ ||...
T Consensus 299 -~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 299 -EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp -SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred -CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 3689999986 43 33345677788888888887 55443
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.60 E-value=1.7e-07 Score=94.46 Aligned_cols=101 Identities=10% Similarity=0.112 Sum_probs=73.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~----------------------------------------v~G~D~S~~ML~~s~ 210 (394)
++..||||+||+|.++.|.|..+.. |+|+|+|..|+..|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999999987643 999999999998777
Q ss_pred hhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc
Q 016155 211 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 288 (394)
Q Consensus 211 filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fF 288 (394)
.-+... ...+.+.+..+|+.++.. .++||+||+. |.
T Consensus 281 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~~~~----~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 281 QNAVEA--------------------------------------GLGDLITFRQLQVADFQT----EDEYGVVVANPPYG 318 (393)
T ss_dssp HHHHHT--------------------------------------TCTTCSEEEECCGGGCCC----CCCSCEEEECCCCC
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHhCCC----CCCCCEEEECCCCc
Confidence 332110 011237889999998643 3589999998 54
Q ss_pred c--CChhhHHHHHHHHHHhccC--CcEEE
Q 016155 289 I--DTAHNIVEYIEIISRILKD--GGVWI 313 (394)
Q Consensus 289 l--Dta~ni~~yl~~I~~~LKp--GG~wI 313 (394)
. .....+.+..+.+.+.||+ ||...
T Consensus 319 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 319 ERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred cccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 3 2335566777778888877 65544
No 248
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.58 E-value=4.3e-07 Score=91.39 Aligned_cols=101 Identities=9% Similarity=0.093 Sum_probs=76.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~----------------------------------------v~G~D~S~~ML~~s~ 210 (394)
++..||||+||+|.++.|.|..+.. |+|+|+|..|+..|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999999987643 999999999998777
Q ss_pred hhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc
Q 016155 211 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 288 (394)
Q Consensus 211 filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fF 288 (394)
..+..+ ...+.+.+..+|+.++.. .+.||+||+. |-
T Consensus 274 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~l~~----~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 274 KNAREV--------------------------------------GLEDVVKLKQMRLQDFKT----NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHT--------------------------------------TCTTTEEEEECCGGGCCC----CCCSCEEEECCCCT
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHHCCc----cCCcCEEEECCchh
Confidence 332110 111237899999998643 3589999998 54
Q ss_pred --cCChhhHHHHHHHHHHhccC--CcEEE
Q 016155 289 --IDTAHNIVEYIEIISRILKD--GGVWI 313 (394)
Q Consensus 289 --lDta~ni~~yl~~I~~~LKp--GG~wI 313 (394)
+....++.+..+.+.+.||+ ||...
T Consensus 312 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 312 ERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred hccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 55556788888888888887 66554
No 249
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.55 E-value=1.4e-07 Score=91.10 Aligned_cols=156 Identities=12% Similarity=0.026 Sum_probs=102.1
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhcccccccc
Q 016155 145 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEW 222 (394)
Q Consensus 145 g~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~ 222 (394)
...||-.+|.++...+-..++ ...+|||+|||+|=|+..++.. ...+.|+|++..|+.+++-.+...
T Consensus 111 STreRLp~lD~fY~~i~~~i~-----~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~------ 179 (281)
T 3lcv_B 111 STRERLPHLDEFYRELFRHLP-----RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL------ 179 (281)
T ss_dssp HHHHHGGGHHHHHHHHGGGSC-----CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT------
T ss_pred CHHHHhHhHHHHHHHHHhccC-----CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 457888888888777777764 4569999999999999999887 358999999999998777444210
Q ss_pred ccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHH-HHHHH
Q 016155 223 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIV-EYIEI 301 (394)
Q Consensus 223 ~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~-~yl~~ 301 (394)
+-+.++..+|+..-. ..+.||+|+..--|...++-. ...-.
T Consensus 180 ----------------------------------g~~~~~~v~D~~~~~----p~~~~DvaL~lkti~~Le~q~kg~g~~ 221 (281)
T 3lcv_B 180 ----------------------------------NVPHRTNVADLLEDR----LDEPADVTLLLKTLPCLETQQRGSGWE 221 (281)
T ss_dssp ----------------------------------TCCEEEEECCTTTSC----CCSCCSEEEETTCHHHHHHHSTTHHHH
T ss_pred ----------------------------------CCCceEEEeeecccC----CCCCcchHHHHHHHHHhhhhhhHHHHH
Confidence 012567778876532 258899998754333322211 12338
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCccc-cCCHHHHHHHHHhCCCEEEEEe
Q 016155 302 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSI-ELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 302 I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~i-eLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+...|+|||++||+.- ....|..+ .+ +.=.+.+++.+...|+.+.+..
T Consensus 222 ll~aL~~~~vvVSfp~-----ksl~Grs~--gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 222 VIDIVNSPNIVVTFPT-----KSLGQRSK--GMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHSSCSEEEEEEEC-----C---------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHhCCCCEEEeccc-----hhhcCCCc--chhhHHHHHHHHHHHhcCCceeeee
Confidence 9999999999999632 00011112 22 2233556666777888665543
No 250
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.53 E-value=3.7e-07 Score=94.00 Aligned_cols=131 Identities=16% Similarity=0.061 Sum_probs=87.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||.+ +-.|+|+|+|..|+..++-.+... .+
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~--------------------------g~--- 155 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW--------------------------GV--- 155 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5779999999999999999986 358999999999997655322110 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec------ccCChhhH----------------HHHHHHHHHh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF------FIDTAHNI----------------VEYIEIISRI 305 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f------FlDta~ni----------------~~yl~~I~~~ 305 (394)
.++.++.+|+.++.. ...+.||+|+.-- .+...+++ .+.|+.+.++
T Consensus 156 ----------~nv~v~~~Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 223 (456)
T 3m4x_A 156 ----------SNAIVTNHAPAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKM 223 (456)
T ss_dssp ----------SSEEEECCCHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred ----------CceEEEeCCHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 136778888877531 1147899998621 11111111 2679999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
|||||++|-.. ..+ ..+=+.+.+..++++.||+++..
T Consensus 224 LkpGG~LvYsT-Cs~------------~~eEne~vv~~~l~~~~~~l~~~ 260 (456)
T 3m4x_A 224 LKNKGQLIYST-CTF------------APEENEEIISWLVENYPVTIEEI 260 (456)
T ss_dssp EEEEEEEEEEE-SCC------------CGGGTHHHHHHHHHHSSEEEECC
T ss_pred cCCCcEEEEEE-eec------------ccccCHHHHHHHHHhCCCEEEec
Confidence 99999998210 000 01225677888888999887763
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.53 E-value=4.1e-07 Score=88.56 Aligned_cols=85 Identities=14% Similarity=0.045 Sum_probs=62.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.+.+..... ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+..
T Consensus 38 i~~~Iv~~l~~~---~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~-------------------- 94 (295)
T 3gru_A 38 FVNKAVESANLT---KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL-------------------- 94 (295)
T ss_dssp HHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--------------------
T ss_pred HHHHHHHhcCCC---CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--------------------
Confidence 444444444322 567999999999999999999999999999999999765522210
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF 287 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f 287 (394)
..++.++.||+.++.. ....||+|+.+.
T Consensus 95 ---------------------~~~v~vi~gD~l~~~~---~~~~fD~Iv~Nl 122 (295)
T 3gru_A 95 ---------------------YNNIEIIWGDALKVDL---NKLDFNKVVANL 122 (295)
T ss_dssp ---------------------CSSEEEEESCTTTSCG---GGSCCSEEEEEC
T ss_pred ---------------------CCCeEEEECchhhCCc---ccCCccEEEEeC
Confidence 0237889999988632 245799999773
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.51 E-value=6.8e-07 Score=90.94 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..||+.|..|+|+|+|..|+..|+..+.. +
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~----n------------------------------ 335 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI----N------------------------------ 335 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H------------------------------
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 456999999999999999999999999999999999776632210 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh-hH-HHHHHHHHHhccCCcEEEE
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH-NI-VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~-ni-~~yl~~I~~~LKpGG~wIN 314 (394)
.. . +.+..+|+.++.. .+||+|+.. ... .. ...++.+. .|||||+++-
T Consensus 336 ----gl-~-v~~~~~d~~~~~~-----~~fD~Vv~d----PPr~g~~~~~~~~l~-~l~p~givyv 385 (425)
T 2jjq_A 336 ----NV-D-AEFEVASDREVSV-----KGFDTVIVD----PPRAGLHPRLVKRLN-REKPGVIVYV 385 (425)
T ss_dssp ----TC-C-EEEEECCTTTCCC-----TTCSEEEEC----CCTTCSCHHHHHHHH-HHCCSEEEEE
T ss_pred ----CC-c-EEEEECChHHcCc-----cCCCEEEEc----CCccchHHHHHHHHH-hcCCCcEEEE
Confidence 00 1 5789999888632 289999873 221 11 13555554 4999998873
No 253
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.49 E-value=2.2e-07 Score=96.08 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=72.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||.+ +-.|+|+|+|..|+..++-.+... .
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~--------------------------g---- 166 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC--------------------------G---- 166 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------T----
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C----
Confidence 5679999999999999999986 368999999999997665322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---ccC---------Chhh-------HHHHHHHHHHh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FID---------TAHN-------IVEYIEIISRI 305 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT---~f---FlD---------ta~n-------i~~yl~~I~~~ 305 (394)
-.++.++.+|+.++.. ...+.||+|+. |. .+. +..+ ..+.|+.+.++
T Consensus 167 ---------~~nv~~~~~D~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 235 (479)
T 2frx_A 167 ---------ISNVALTHFDGRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHA 235 (479)
T ss_dssp ---------CCSEEEECCCSTTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCcEEEEeCCHHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHh
Confidence 0136778889877532 02468999987 31 111 1111 23678999999
Q ss_pred ccCCcEEE
Q 016155 306 LKDGGVWI 313 (394)
Q Consensus 306 LKpGG~wI 313 (394)
|||||++|
T Consensus 236 LkpGG~Lv 243 (479)
T 2frx_A 236 LRPGGTLV 243 (479)
T ss_dssp EEEEEEEE
T ss_pred cCCCCEEE
Confidence 99999998
No 254
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.49 E-value=3.4e-07 Score=92.60 Aligned_cols=130 Identities=15% Similarity=0.039 Sum_probs=84.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+|||+|..+..||.++ ..|+|+|+|..|+..++-.+...
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~-------------------------------- 293 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL-------------------------------- 293 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--------------------------------
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--------------------------------
Confidence 56799999999999999999986 58999999999986555322110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---ccCC---------hhhH-------HHHHHHHHHhc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FIDT---------AHNI-------VEYIEIISRIL 306 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT---~f---FlDt---------a~ni-------~~yl~~I~~~L 306 (394)
+.++.++.+|+.++... ...+.||+|+. |. .+.. ..++ .+.++.+.++|
T Consensus 294 --------g~~~~~~~~D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 294 --------GMKATVKQGDGRYPSQW-CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 (429)
T ss_dssp --------TCCCEEEECCTTCTHHH-HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE
T ss_pred --------CCCeEEEeCchhhchhh-cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 00146678888765210 12368999986 21 1221 1222 47799999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHh-CCCEEEE
Q 016155 307 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEK 354 (394)
Q Consensus 307 KpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~-~GF~ii~ 354 (394)
||||++|-...-+. -+=+.+.+..++++ -+|+++.
T Consensus 365 kpGG~lvystcs~~-------------~~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 365 KTGGTLVYATCSVL-------------PEENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp EEEEEEEEEESCCC-------------GGGTHHHHHHHHHHCTTCEECS
T ss_pred CCCCEEEEEECCCC-------------hhhHHHHHHHHHHhCCCCEEeC
Confidence 99999984211110 01134567777765 4787764
No 255
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.48 E-value=7.7e-07 Score=90.28 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=80.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+|||+|.++..||+.+..|+|+|+|..|+..|+..+.. + .
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~----~----------------------~------- 332 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL----N----------------------G------- 332 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH----T----------------------T-------
T ss_pred CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C-------
Confidence 456999999999999999999999999999999999877632210 0 0
Q ss_pred CCCCCCCCceeEEecccccccC-CCCCCCCccEEEEecccCChhh-HHHHHHHHHHhccCCcEEEE-ecCcchhhhhccC
Q 016155 251 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHN-IVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 327 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~-~~~~~~~fD~VvT~fFlDta~n-i~~yl~~I~~~LKpGG~wIN-~GPLlyh~~~~~g 327 (394)
-.++.|+.+|+.+... .+...++||+|+.. .... ..+.++.+.+ ++|++++.- ..|-
T Consensus 333 ------~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d----PPr~g~~~~~~~l~~-~~p~~ivyvsc~p~--------- 392 (433)
T 1uwv_A 333 ------LQNVTFYHENLEEDVTKQPWAKNGFDKVLLD----PARAGAAGVMQQIIK-LEPIRIVYVSCNPA--------- 392 (433)
T ss_dssp ------CCSEEEEECCTTSCCSSSGGGTTCCSEEEEC----CCTTCCHHHHHHHHH-HCCSEEEEEESCHH---------
T ss_pred ------CCceEEEECCHHHHhhhhhhhcCCCCEEEEC----CCCccHHHHHHHHHh-cCCCeEEEEECChH---------
Confidence 0147889999887422 11234689999863 2211 2244555543 788876642 2221
Q ss_pred CCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 328 QEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 328 ~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
.| ..++ .++.+.||++.+..
T Consensus 393 -------tl-ard~-~~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 393 -------TL-ARDS-EALLKAGYTIARLA 412 (433)
T ss_dssp -------HH-HHHH-HHHHHTTCEEEEEE
T ss_pred -------HH-HhhH-HHHHHCCcEEEEEE
Confidence 11 1234 34556799998854
No 256
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.46 E-value=1.4e-06 Score=91.15 Aligned_cols=144 Identities=17% Similarity=0.111 Sum_probs=87.8
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--------------------CCeEEEEeCCHHHHHHHhhhhh
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--------------------GFISQGNEFSYYMMICSSFILN 214 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~--------------------Gf~v~G~D~S~~ML~~s~filn 214 (394)
+|+..+.+.+.. ..+.+|||||||+|.+...+++. ...++|+|++..|+..|+..+-
T Consensus 156 ~iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 156 PLIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 344555444432 25679999999999998877653 2479999999999977764321
Q ss_pred ccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC--
Q 016155 215 HTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-- 290 (394)
Q Consensus 215 ~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD-- 290 (394)
. |...+. |+ ....+..||++.... ...+.||+|+++ |-..
T Consensus 233 l-------------~gi~~~------------~~---------~~~~I~~gDtL~~~~--~~~~~fD~Vv~NPPf~~~~~ 276 (541)
T 2ar0_A 233 L-------------HDIEGN------------LD---------HGGAIRLGNTLGSDG--ENLPKAHIVATNPPFGSAAG 276 (541)
T ss_dssp T-------------TTCCCB------------GG---------GTBSEEESCTTSHHH--HTSCCEEEEEECCCCTTCSS
T ss_pred H-------------hCCCcc------------cc---------ccCCeEeCCCccccc--ccccCCeEEEECCCcccccc
Confidence 0 000000 00 114678888765421 124689999987 3211
Q ss_pred ----------ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhC
Q 016155 291 ----------TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY 348 (394)
Q Consensus 291 ----------ta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~ 348 (394)
+...-..++..+.+.|||||+++-+-|--+-|.. -..+.|++.|.+.
T Consensus 277 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~~L~~~-----------~~~~~iR~~L~~~ 333 (541)
T 2ar0_A 277 TNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEG-----------GKGTDIRRDLMDK 333 (541)
T ss_dssp CCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCC-----------THHHHHHHHHHHH
T ss_pred hhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCcceecC-----------cHHHHHHHHHhhc
Confidence 1111347899999999999999866553221211 0246787766654
No 257
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.45 E-value=1.1e-06 Score=84.43 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=67.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
+++.|-+..... ++ +|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+
T Consensus 35 i~~~Iv~~~~~~---~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~---------------------- 88 (271)
T 3fut_A 35 HLRRIVEAARPF---TG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETL---------------------- 88 (271)
T ss_dssp HHHHHHHHHCCC---CS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHT----------------------
T ss_pred HHHHHHHhcCCC---CC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----------------------
Confidence 555555544322 45 9999999999999999999999999999999996554111
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHHHHH
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEI 301 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta~ni~~yl~~ 301 (394)
+ ..++.++.||+.++... ....+|.||++ |+|.+. -+.++++.
T Consensus 89 -----------~---------~~~v~vi~~D~l~~~~~--~~~~~~~iv~NlPy~iss~-il~~ll~~ 133 (271)
T 3fut_A 89 -----------S---------GLPVRLVFQDALLYPWE--EVPQGSLLVANLPYHIATP-LVTRLLKT 133 (271)
T ss_dssp -----------T---------TSSEEEEESCGGGSCGG--GSCTTEEEEEEECSSCCHH-HHHHHHHH
T ss_pred -----------C---------CCCEEEEECChhhCChh--hccCccEEEecCcccccHH-HHHHHhcC
Confidence 0 02478999999886421 11368999887 456443 35555554
No 258
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.44 E-value=3.6e-07 Score=91.68 Aligned_cols=113 Identities=15% Similarity=0.200 Sum_probs=74.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+||++|||+|.++.++++.+- .|+++|++..|+..|+--+.. ... + .+. |
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~------------l~~--~---------~l~--d- 241 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRK------------TCG--D---------VLD--N- 241 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC---------------------------CCS--S-
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH------------hcc--c---------ccc--c-
Confidence 578999999999999999999874 699999999999776622110 000 0 000 0
Q ss_pred CCCCCCCCCceeEEecccccccCCC-CCCCCccEEEEeccc-CC--hh-hH--HHHHHHH----HHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDP-SQVGAWDAVVTCFFI-DT--AH-NI--VEYIEII----SRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~-~~~~~fD~VvT~fFl-Dt--a~-ni--~~yl~~I----~~~LKpGG~wIN 314 (394)
+...++.++.+|..++.... ...++||+|+.-.+- .. .+ .+ .++++.+ .++|||||+++.
T Consensus 242 -----p~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~ 312 (364)
T 2qfm_A 242 -----LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 312 (364)
T ss_dssp -----SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -----cCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 01125889999998853200 024789999876432 21 11 11 4667777 899999999984
No 259
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.41 E-value=2.4e-07 Score=95.53 Aligned_cols=130 Identities=13% Similarity=0.022 Sum_probs=85.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... .
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~--------------------------G---- 150 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW--------------------------G---- 150 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------C----
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C----
Confidence 5779999999999999999976 248999999999997665322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---cc---------CChhhH-------HHHHHHHHHh
Q 016155 248 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FI---------DTAHNI-------VEYIEIISRI 305 (394)
Q Consensus 248 Dv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT---~f---Fl---------Dta~ni-------~~yl~~I~~~ 305 (394)
. . +.++.+|+.++.. ...++||+|+. |. .+ .+..++ .+.|+.+.++
T Consensus 151 --------~-~-v~~~~~Da~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 151 --------A-P-LAVTQAPPRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRL 218 (464)
T ss_dssp --------C-C-CEEECSCHHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTT
T ss_pred --------C-e-EEEEECCHHHhhh--hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 0 1 4677888877531 12478999985 21 11 111222 5789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhC-CCEEEEE
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY-GFEFEKE 355 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~-GF~ii~e 355 (394)
|||||++|-.. ..+ ..+=+.+.+..++++. +|+++..
T Consensus 219 LkpGG~LvysT-Cs~------------~~eEne~vv~~~l~~~~~~~l~~~ 256 (464)
T 3m6w_A 219 LGPGGVLVYST-CTF------------APEENEGVVAHFLKAHPEFRLEDA 256 (464)
T ss_dssp EEEEEEEEEEE-SCC------------CGGGTHHHHHHHHHHCTTEEEECC
T ss_pred cCCCcEEEEEe-ccC------------chhcCHHHHHHHHHHCCCcEEEec
Confidence 99999998210 000 0122566677778776 6887753
No 260
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.37 E-value=9.4e-06 Score=81.58 Aligned_cols=65 Identities=28% Similarity=0.401 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHhccCCcEEEE--ec-----Cc-------ch-h-----hhhc--cCC--------CCCccccCCHHHHHH
Q 016155 294 NIVEYIEIISRILKDGGVWIN--LG-----PL-------LY-H-----FADL--YGQ--------EDEMSIELSLEDVKR 343 (394)
Q Consensus 294 ni~~yl~~I~~~LKpGG~wIN--~G-----PL-------ly-h-----~~~~--~g~--------~~~~~ieLS~eEl~~ 343 (394)
|...+|+.+++.|||||++|- .| |. .| . +.+. .|. -....+..|.+|++.
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~ 282 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKE 282 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHH
Confidence 455679999999999999983 22 11 11 1 1110 010 011245679999999
Q ss_pred HHH-hCCCEEEEEeec
Q 016155 344 VAL-HYGFEFEKEKTI 358 (394)
Q Consensus 344 ll~-~~GF~ii~e~~i 358 (394)
+++ ..||++.+.+..
T Consensus 283 ~l~~~~~F~I~~le~~ 298 (374)
T 3b5i_A 283 VVDANGSFAIDKLVVY 298 (374)
T ss_dssp HHHHHCSEEEEEEEEE
T ss_pred HHHhcCCcEEEEEEEE
Confidence 998 599999986543
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.37 E-value=1.1e-06 Score=83.47 Aligned_cols=52 Identities=12% Similarity=0.017 Sum_probs=41.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~ 210 (394)
+++.|.+.+... ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 17 i~~~iv~~~~~~---~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~ 68 (255)
T 3tqs_A 17 VLQKIVSAIHPQ---KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQ 68 (255)
T ss_dssp HHHHHHHHHCCC---TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHH
T ss_pred HHHHHHHhcCCC---CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHH
Confidence 444444444322 5679999999999999999999999999999999997654
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.36 E-value=7.5e-07 Score=88.35 Aligned_cols=137 Identities=9% Similarity=0.038 Sum_probs=85.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCC
Q 016155 155 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 234 (394)
Q Consensus 155 pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~ 234 (394)
.+++.+.+.... .+.+|||+|||+|.++..||+.+..|+|+|+|..|+..++..+.. +
T Consensus 201 ~l~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~----n-------------- 258 (369)
T 3bt7_A 201 QMLEWALDVTKG----SKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAA----N-------------- 258 (369)
T ss_dssp HHHHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 355555555432 246899999999999999999888999999999999776632210 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CCCC------------CCCccEEEEecccCChhhHHHHHHH
Q 016155 235 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPSQ------------VGAWDAVVTCFFIDTAHNIVEYIEI 301 (394)
Q Consensus 235 ~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~-~~~~------------~~~fD~VvT~fFlDta~ni~~yl~~ 301 (394)
. . .++.++.||+.++.. .+.. .+.||+|+. |.+.. .+.+.
T Consensus 259 --------g------------~-~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~----dPPr~--g~~~~ 311 (369)
T 3bt7_A 259 --------H------------I-DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV----DPPRS--GLDSE 311 (369)
T ss_dssp --------T------------C-CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE----CCCTT--CCCHH
T ss_pred --------C------------C-CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE----CcCcc--ccHHH
Confidence 0 0 136788888776421 0000 137999964 54321 23456
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEee
Q 016155 302 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 357 (394)
Q Consensus 302 I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~ 357 (394)
+.+.|+|||.+|-+. . .+ ..-..++..+. + ||++.+...
T Consensus 312 ~~~~l~~~g~ivyvs---c--------~p----~t~ard~~~l~-~-~y~~~~~~~ 350 (369)
T 3bt7_A 312 TEKMVQAYPRILYIS---C--------NP----ETLCKNLETLS-Q-THKVERLAL 350 (369)
T ss_dssp HHHHHTTSSEEEEEE---S--------CH----HHHHHHHHHHH-H-HEEEEEEEE
T ss_pred HHHHHhCCCEEEEEE---C--------CH----HHHHHHHHHHh-h-CcEEEEEEe
Confidence 777888999887321 0 00 01234565554 3 798887653
No 263
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.36 E-value=9.1e-07 Score=88.77 Aligned_cols=111 Identities=12% Similarity=-0.023 Sum_probs=72.9
Q ss_pred CCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~-G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
+.+|||+|||+|.++..+|++ | ..|++||++..++..++.-+..... .+..|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~------------------------~~~~~~~ 103 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFD------------------------GELRESK 103 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCC------------------------SCCEECS
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcc------------------------ccccccc
Confidence 568999999999999999998 4 5899999999999776633221100 0000000
Q ss_pred CCC-CCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 250 HPA-SAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 250 ~p~-~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
... .... .++.++.+|+.++.. ...+.||+|+ +|..-...++++...++|||||+++
T Consensus 104 ~~~~~~gl-~~i~v~~~Da~~~~~--~~~~~fD~I~----lDP~~~~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 104 GRAILKGE-KTIVINHDDANRLMA--ERHRYFHFID----LDPFGSPMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp SEEEEESS-SEEEEEESCHHHHHH--HSTTCEEEEE----ECCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred ccccccCC-CceEEEcCcHHHHHH--hccCCCCEEE----eCCCCCHHHHHHHHHHhcCCCCEEE
Confidence 000 0000 127889999877532 1135799998 4443334588999999999999775
No 264
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.33 E-value=6.2e-07 Score=95.81 Aligned_cols=118 Identities=21% Similarity=0.165 Sum_probs=79.5
Q ss_pred chHH-HHHHHHhhCCCCCC-CCCCeEEEecCCCChhHH---HHHHcC-C--eEEEEeCCHHHHHHHhhhhhccccccccc
Q 016155 152 CYKP-ILEELDALFPNRSK-ESPPACLVPGAGLGRLAL---EISHLG-F--ISQGNEFSYYMMICSSFILNHTETAGEWN 223 (394)
Q Consensus 152 ~y~p-Il~~L~~~~p~~~~-~~~~~VLvpGCGlGRLa~---eLA~~G-f--~v~G~D~S~~ML~~s~filn~~~~~~~~~ 223 (394)
.|.. |...|....+.... .+...|||+|||+|-|+. ..++++ - +|.|+|-|. |...+..+.+. +
T Consensus 336 ~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~----N--- 407 (637)
T 4gqb_A 336 QYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQF----E--- 407 (637)
T ss_dssp HHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHH----H---
T ss_pred HHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHh----c---
Confidence 3443 44556665543221 234579999999999944 444433 2 589999997 55555544321 1
Q ss_pred cccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHH
Q 016155 224 IYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIE 300 (394)
Q Consensus 224 i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~---fFlDta~ni~~yl~ 300 (394)
...+.+.++.||++++-. .++.|+||+= +|++-.. +.+.+.
T Consensus 408 -------------------------------~~~dkVtVI~gd~eev~L----PEKVDIIVSEwMG~fLl~E~-mlevL~ 451 (637)
T 4gqb_A 408 -------------------------------EWGSQVTVVSSDMREWVA----PEKADIIVSELLGSFADNEL-SPECLD 451 (637)
T ss_dssp -------------------------------TTGGGEEEEESCTTTCCC----SSCEEEEECCCCBTTBGGGC-HHHHHH
T ss_pred -------------------------------cCCCeEEEEeCcceeccC----CcccCEEEEEcCcccccccC-CHHHHH
Confidence 112348899999999864 3789999987 4666543 558888
Q ss_pred HHHHhccCCcEEE
Q 016155 301 IISRILKDGGVWI 313 (394)
Q Consensus 301 ~I~~~LKpGG~wI 313 (394)
...|.|||||+.|
T Consensus 452 Ardr~LKPgGimi 464 (637)
T 4gqb_A 452 GAQHFLKDDGVSI 464 (637)
T ss_dssp HHGGGEEEEEEEE
T ss_pred HHHHhcCCCcEEc
Confidence 8899999999998
No 265
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.31 E-value=7e-06 Score=86.13 Aligned_cols=128 Identities=11% Similarity=0.009 Sum_probs=79.1
Q ss_pred CeEEEecCCCChhHHHHHHc-----------------CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCC
Q 016155 173 PACLVPGAGLGRLALEISHL-----------------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 235 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~~-----------------Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~ 235 (394)
.+||||+||+|.+...+++. ...+.|+|++..|+..|+.-+-. |
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-------------~------ 306 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-------------R------ 306 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-------------T------
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-------------h------
Confidence 49999999999998776532 45799999999999777632210 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC-----------------------
Q 016155 236 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID----------------------- 290 (394)
Q Consensus 236 ~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD----------------------- 290 (394)
.+. .++.+..||.+.... .....||+||++ |-..
T Consensus 307 -------gi~------------~~i~i~~gDtL~~~~--~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~ 365 (544)
T 3khk_A 307 -------GID------------FNFGKKNADSFLDDQ--HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRI 365 (544)
T ss_dssp -------TCC------------CBCCSSSCCTTTSCS--CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEE
T ss_pred -------CCC------------cccceeccchhcCcc--cccccccEEEECCCcCCccccchhhhhhhhhhcCccccccc
Confidence 000 012224566544211 234678888876 3221
Q ss_pred ---Chh-hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCC
Q 016155 291 ---TAH-NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 350 (394)
Q Consensus 291 ---ta~-ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF 350 (394)
... .-..++..+.+.|||||+.+-+-|--+-+.. .-....|++.|.+.+.
T Consensus 366 ~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~----------~~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 366 LTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN----------TNNEGEIRKTLVEQDL 419 (544)
T ss_dssp CCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC----------GGGHHHHHHHHHHTTC
T ss_pred ccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcC----------cchHHHHHHHHHhCCc
Confidence 111 1236899999999999998876553222211 1256788888877654
No 266
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.30 E-value=3.9e-06 Score=90.48 Aligned_cols=105 Identities=18% Similarity=0.206 Sum_probs=72.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--------------------------------------------CeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--------------------------------------------FISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--------------------------------------------f~v~G~D~S~~ML 206 (394)
++..||||+||+|.++.+.|..+ ..++|+|++..|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999998764 4799999999999
Q ss_pred HHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe
Q 016155 207 ICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC 286 (394)
Q Consensus 207 ~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~ 286 (394)
..|+.-+..+ ...+.+.+.++|+.++.. |...+.||+||++
T Consensus 270 ~~A~~N~~~a--------------------------------------gv~~~i~~~~~D~~~~~~-~~~~~~~d~Iv~N 310 (703)
T 3v97_A 270 QRARTNARLA--------------------------------------GIGELITFEVKDVAQLTN-PLPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHHHHHT--------------------------------------TCGGGEEEEECCGGGCCC-SCTTCCCCEEEEC
T ss_pred HHHHHHHHHc--------------------------------------CCCCceEEEECChhhCcc-ccccCCCCEEEeC
Confidence 8877332211 111237899999998643 2223489999998
Q ss_pred --cc--cCChhhHHHHHHHHHHh---ccCCcEEEE
Q 016155 287 --FF--IDTAHNIVEYIEIISRI---LKDGGVWIN 314 (394)
Q Consensus 287 --fF--lDta~ni~~yl~~I~~~---LKpGG~wIN 314 (394)
|- +....++.+..+.+.+. ++|||...-
T Consensus 311 PPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 311 PPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp CCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred CCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 53 44445565555555544 557987763
No 267
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.25 E-value=2.1e-05 Score=82.45 Aligned_cols=132 Identities=15% Similarity=0.099 Sum_probs=85.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc-----CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL-----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 245 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-----Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~ 245 (394)
.+.+||||+||+|.+...+++. ...+.|+|++..|+..|+.-+- . +.+.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~--l------------------------~gi~ 274 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI--L------------------------HGVP 274 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH--H------------------------TTCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH--H------------------------cCCC
Confidence 5679999999999998888776 5689999999999877663210 0 0000
Q ss_pred cCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC--------------------Chhh-HHHHHHHH
Q 016155 246 IPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--------------------TAHN-IVEYIEII 302 (394)
Q Consensus 246 iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD--------------------ta~n-i~~yl~~I 302 (394)
..++.+..||++...-+......||+||++ |-.. ...+ -..++..+
T Consensus 275 -----------~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~ 343 (542)
T 3lkd_A 275 -----------IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHG 343 (542)
T ss_dssp -----------GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHH
T ss_pred -----------cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHH
Confidence 013567888877641011235789999987 3211 0011 12589999
Q ss_pred HHhcc-CCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCC
Q 016155 303 SRILK-DGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 350 (394)
Q Consensus 303 ~~~LK-pGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF 350 (394)
.+.|| |||+..-+-|--+-|.. -....|++.+.+.+.
T Consensus 344 l~~Lk~~gGr~a~VlP~g~Lf~~-----------~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 344 YYHLKQDNGVMAIVLPHGVLFRG-----------NAEGTIRKALLEEGA 381 (542)
T ss_dssp HHTBCTTTCEEEEEEETHHHHCC-----------THHHHHHHHHHHTTC
T ss_pred HHHhCCCceeEEEEecchHhhCC-----------chhHHHHHHHHhCCc
Confidence 99999 99999766554332221 125678888777654
No 268
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.15 E-value=4.5e-06 Score=89.98 Aligned_cols=116 Identities=15% Similarity=0.110 Sum_probs=75.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHH--HH--cC-----------CeEEEEeCCHHHHHHHhhhhhcccccc
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEI--SH--LG-----------FISQGNEFSYYMMICSSFILNHTETAG 220 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eL--A~--~G-----------f~v~G~D~S~~ML~~s~filn~~~~~~ 220 (394)
|...++..++.. .+...|||+|||+|-|+... |. .| ..|+|+|-|.......+.+.. +
T Consensus 396 I~~al~d~~~~~--~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-----N 468 (745)
T 3ua3_A 396 VVGALKDLGADG--RKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-----R 468 (745)
T ss_dssp HHHHHHHHHTTC--CSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-----H
T ss_pred HHHHHHHhhccc--CCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-----c
Confidence 334455544321 13567999999999996432 22 23 389999999855543332210 1
Q ss_pred ccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCC--CCCCCCccEEEEe---cccCChhhH
Q 016155 221 EWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD--PSQVGAWDAVVTC---FFIDTAHNI 295 (394)
Q Consensus 221 ~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~--~~~~~~fD~VvT~---fFlDta~ni 295 (394)
. ..+.+.++.||++++..+ ....++.|+||+- +|++.. -.
T Consensus 469 g----------------------------------~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nE-L~ 513 (745)
T 3ua3_A 469 T----------------------------------WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNE-LS 513 (745)
T ss_dssp T----------------------------------TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGG-SH
T ss_pred C----------------------------------CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchh-cc
Confidence 1 123378899999997531 0013789999987 477654 24
Q ss_pred HHHHHHHHHhccCCcEEE
Q 016155 296 VEYIEIISRILKDGGVWI 313 (394)
Q Consensus 296 ~~yl~~I~~~LKpGG~wI 313 (394)
.+.|..+.+.|||||+.|
T Consensus 514 pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 514 PECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHTTGGGSCTTCEEE
T ss_pred HHHHHHHHHhCCCCcEEE
Confidence 567888889999999998
No 269
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.13 E-value=7.3e-06 Score=77.69 Aligned_cols=50 Identities=12% Similarity=0.070 Sum_probs=37.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCe--EEEEeCCHHHHHHHh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSS 210 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~--v~G~D~S~~ML~~s~ 210 (394)
+++.+.+.+.. .++.+|||+|||+|.++. |++ |.. |+|+|+|..|+..++
T Consensus 9 i~~~iv~~~~~---~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~ 60 (252)
T 1qyr_A 9 VIDSIVSAINP---QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQ 60 (252)
T ss_dssp HHHHHHHHHCC---CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHH
T ss_pred HHHHHHHhcCC---CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHH
Confidence 44444444332 256789999999999999 764 677 999999999996554
No 270
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.12 E-value=1.1e-06 Score=83.52 Aligned_cols=40 Identities=23% Similarity=0.216 Sum_probs=35.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH-------HHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSY-------YMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~-------~ML~~s~ 210 (394)
++.+|||+|||+|+++..||.+|..|+|+|+|. .|+..++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~ 129 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRAL 129 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHH
Confidence 456899999999999999999999999999999 6665443
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.09 E-value=1.1e-05 Score=76.16 Aligned_cols=51 Identities=14% Similarity=0.056 Sum_probs=41.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHH
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICS 209 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~G-f~v~G~D~S~~ML~~s 209 (394)
+++.|.+.++.. ++.+|||+|||+|.++..|+++| ..|+|+|+|..|+..+
T Consensus 19 i~~~iv~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~ 70 (249)
T 3ftd_A 19 VLKKIAEELNIE---EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENL 70 (249)
T ss_dssp HHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHH
T ss_pred HHHHHHHhcCCC---CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHH
Confidence 566666655432 56799999999999999999996 8999999999998644
No 272
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.09 E-value=1.1e-05 Score=78.79 Aligned_cols=108 Identities=16% Similarity=0.175 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+||++|-|.|..+.++.+. + -.|+.+|+...++.+++.-+-. ... + .
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~------------~~~--~--~------------ 134 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPN------------HNA--G--S------------ 134 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHH------------HHT--T--G------------
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcc------------ccc--c--c------------
Confidence 5679999999999999999987 3 5799999999999776532210 000 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD--ta~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
....++.++.+|..++-. ...++||+|+.=.+=. .+..+ .++++.++++|||||+++.
T Consensus 135 ------~~dpRv~v~~~Dg~~~l~--~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 135 ------YDDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp ------GGCTTEEEEESCTTTTTS--CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred ------cCCCcEEEEechHHHHHh--hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 001247889999888643 3468899998654411 11112 3799999999999999995
No 273
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.09 E-value=3.6e-05 Score=77.63 Aligned_cols=98 Identities=20% Similarity=0.231 Sum_probs=59.0
Q ss_pred eEEecccccccCCCCCCCCccEEEEecc---cCChh------------------------------------hHHHHHHH
Q 016155 261 SMCGGDFVEVYSDPSQVGAWDAVVTCFF---IDTAH------------------------------------NIVEYIEI 301 (394)
Q Consensus 261 s~~~GDf~ely~~~~~~~~fD~VvT~fF---lDta~------------------------------------ni~~yl~~ 301 (394)
-|+.|.-..+|...+..++||+|++++- |...+ |...+|+.
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445544445554456899999998863 32221 11223888
Q ss_pred HHHhccCCcEEEE--ec--Cc--------chh--hhhc--cCC--------CCCccccCCHHHHHHHHHhC-CCEEEEEe
Q 016155 302 ISRILKDGGVWIN--LG--PL--------LYH--FADL--YGQ--------EDEMSIELSLEDVKRVALHY-GFEFEKEK 356 (394)
Q Consensus 302 I~~~LKpGG~wIN--~G--PL--------lyh--~~~~--~g~--------~~~~~ieLS~eEl~~ll~~~-GF~ii~e~ 356 (394)
.++.|||||+++- .| .. +.. +.+. .|. -....+..|.+|++.++++. ||++.+.+
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999999999984 22 11 100 1110 010 01124567999999999987 59999865
Q ss_pred ec
Q 016155 357 TI 358 (394)
Q Consensus 357 ~i 358 (394)
..
T Consensus 291 ~~ 292 (384)
T 2efj_A 291 TF 292 (384)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.08 E-value=2.2e-06 Score=81.97 Aligned_cols=104 Identities=13% Similarity=0.082 Sum_probs=65.0
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCCC
Q 016155 173 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 252 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~ 252 (394)
.+|||+|||+|+.+.+||.+|..|+|+|.|..|...++..++.+.... .+..
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~-------------------~~~~--------- 141 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADA-------------------EIGG--------- 141 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCT-------------------TTHH---------
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhH-------------------hhhh---------
Confidence 789999999999999999999999999999998766654443332100 0000
Q ss_pred CCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccCChhhHHHHHHHHHHhccCCc
Q 016155 253 SAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFIDTAHNIVEYIEIISRILKDGG 310 (394)
Q Consensus 253 ~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~-fFlDta~ni~~yl~~I~~~LKpGG 310 (394)
....++.++.+|..++.. ...+.||+|+.- .|-..... ..++...++|++.|
T Consensus 142 --~l~~~i~~~~~D~~~~L~--~~~~~fDvV~lDP~y~~~~~s--aavkk~~~~lr~l~ 194 (258)
T 2oyr_A 142 --WLQERLQLIHASSLTALT--DITPRPQVVYLDPMFPHKQKS--ALVKKEMRVFQSLV 194 (258)
T ss_dssp --HHHHHEEEEESCHHHHST--TCSSCCSEEEECCCCCCCCC-------HHHHHHHHHS
T ss_pred --hhhcCEEEEECCHHHHHH--hCcccCCEEEEcCCCCCcccc--hHHHHHHHHHHHhh
Confidence 001248899999887532 112479999764 23222111 44566667776644
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.06 E-value=5.1e-06 Score=83.93 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=70.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 247 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--G-f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iP 247 (394)
++.+|||++||+|.++.++|.+ | -.|++||++..++..++.-+.. +
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~----N--------------------------- 100 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL----N--------------------------- 100 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH----T---------------------------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----h---------------------------
Confidence 4679999999999999999995 5 4799999999998665532211 0
Q ss_pred CCCCCCCCCCCc-eeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 248 DIHPASAGITEG-FSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 248 Dv~p~~~~~~~~-ls~~~GDf~ely~-~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
...++ +.++.+|..++.. . ..+.||+|+. |......++++.+.++|||||+++
T Consensus 101 -------gl~~~~v~v~~~Da~~~l~~~--~~~~fD~V~l----DP~g~~~~~l~~a~~~Lk~gGll~ 155 (392)
T 3axs_A 101 -------NIPEDRYEIHGMEANFFLRKE--WGFGFDYVDL----DPFGTPVPFIESVALSMKRGGILS 155 (392)
T ss_dssp -------TCCGGGEEEECSCHHHHHHSC--CSSCEEEEEE----CCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCceEEEEeCCHHHHHHHh--hCCCCcEEEE----CCCcCHHHHHHHHHHHhCCCCEEE
Confidence 01122 6788899877532 1 1367999964 442223478999999999999776
No 276
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.04 E-value=9.9e-06 Score=78.02 Aligned_cols=40 Identities=15% Similarity=0.030 Sum_probs=36.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI----SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~----v~G~D~S~~ML~~s~ 210 (394)
++.+|||+|||+|.++..|+++|.. |+|+|+|..|+..++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~ 85 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLE 85 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHH
Confidence 5679999999999999999999988 999999999996554
No 277
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.02 E-value=1.6e-05 Score=75.73 Aligned_cols=145 Identities=18% Similarity=0.104 Sum_probs=82.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-------C-------CeEEEEeCC---HHHHHHHhhhh----hccccccccccccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL-------G-------FISQGNEFS---YYMMICSSFIL----NHTETAGEWNIYPWIH 229 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-------G-------f~v~G~D~S---~~ML~~s~fil----n~~~~~~~~~i~Pfi~ 229 (394)
+..+||++|+|+|..+..+++. + -.++++|.. ..||..+.... ..+.+ -...||-
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~--l~~~w~~-- 135 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ--LQAQWPM-- 135 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHH--HHHTCCC--
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHH--HHHhccc--
Confidence 5679999999999988776543 2 378899954 47775432100 00000 0000110
Q ss_pred cccCCCCcccCccccccCCCCCCC-CCCCCceeEEecccccccCCCCCC----CCccEEEEecc-cCChhh--HHHHHHH
Q 016155 230 SNCNSLSDSDQLRPVSIPDIHPAS-AGITEGFSMCGGDFVEVYSDPSQV----GAWDAVVTCFF-IDTAHN--IVEYIEI 301 (394)
Q Consensus 230 ~~sn~~~~~~qlr~v~iPDv~p~~-~~~~~~ls~~~GDf~ely~~~~~~----~~fD~VvT~fF-lDta~n--i~~yl~~ 301 (394)
.+|.+.-.. .....++.++.||+.++.. ... ..||+|+---| -...+. -.++|+.
T Consensus 136 ---------------~~~g~~r~~~~~~~~~l~l~~GDa~~~l~--~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~ 198 (257)
T 2qy6_A 136 ---------------PLPGCHRLLLDEGRVTLDLWFGDINELIS--QLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNA 198 (257)
T ss_dssp ---------------SCSEEEEEEEC--CEEEEEEESCHHHHGG--GSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHH
T ss_pred ---------------cccchhheeccCCceEEEEEECcHHHHHh--hcccccCCeEEEEEECCCCcccChhhcCHHHHHH
Confidence 000000000 0011348899999988542 112 27998853211 111111 2479999
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 302 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 302 I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
++++|||||+++.+. ....+++.+..+||++.+..
T Consensus 199 l~~~L~pGG~l~tys--------------------aa~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 199 MARLARPGGTLATFT--------------------SAGFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp HHHHEEEEEEEEESC--------------------CBHHHHHHHHHHTEEEEEEC
T ss_pred HHHHcCCCcEEEEEe--------------------CCHHHHHHHHHCCCEEEeCC
Confidence 999999999999521 11357888889999988654
No 278
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.01 E-value=1.9e-05 Score=78.99 Aligned_cols=148 Identities=15% Similarity=0.082 Sum_probs=88.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc------------------CCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHL------------------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~------------------Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
+..+|+|+||++|..+..++.. .+.|..||+..-+.-..-..|. +|.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~-----------~~~---- 115 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP-----------IEN---- 115 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT-----------TSC----
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc-----------hhc----
Confidence 4578999999999887766554 3678888887766522110010 000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc---cCCh-----------------
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF---IDTA----------------- 292 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fF---lDta----------------- 292 (394)
.. .+--|+.|.-..+|...+..+++|+|++.+- |...
T Consensus 116 ----~~-------------------~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~ 172 (359)
T 1m6e_X 116 ----DV-------------------DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTC 172 (359)
T ss_dssp ----SC-------------------TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSS
T ss_pred ----cc-------------------CCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCC
Confidence 00 0113344433334544456799999998863 3221
Q ss_pred -------------hhHHHHHHHHHHhccCCcEEEE--e-----cC------cchh-hhhc------cCC--C------CC
Q 016155 293 -------------HNIVEYIEIISRILKDGGVWIN--L-----GP------LLYH-FADL------YGQ--E------DE 331 (394)
Q Consensus 293 -------------~ni~~yl~~I~~~LKpGG~wIN--~-----GP------Llyh-~~~~------~g~--~------~~ 331 (394)
.|...+|+..++.|||||++|- . +| .+|. .... .|. . ..
T Consensus 173 p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~ 252 (359)
T 1m6e_X 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNI 252 (359)
T ss_dssp CCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCC
Confidence 2455679999999999999983 2 23 1231 1111 121 0 11
Q ss_pred ccccCCHHHHHHHHHhC-CCEEEEEe
Q 016155 332 MSIELSLEDVKRVALHY-GFEFEKEK 356 (394)
Q Consensus 332 ~~ieLS~eEl~~ll~~~-GF~ii~e~ 356 (394)
..+..|.+|++.++++. +|++.+.+
T Consensus 253 P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 253 PQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp CCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CccCCCHHHHHHHHHHcCCceEEEEE
Confidence 24567999999999988 55888755
No 279
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.99 E-value=1.2e-05 Score=78.40 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=36.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~ 210 (394)
++.+|||+|||+|.++..|+++ +..|+|+|.|..|+..++
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~ 67 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE 67 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 5679999999999999999998 589999999999997766
No 280
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.95 E-value=4.4e-05 Score=83.54 Aligned_cols=138 Identities=16% Similarity=0.164 Sum_probs=83.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-----CeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccc
Q 016155 171 SPPACLVPGAGLGRLALEISHLG-----FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 245 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G-----f~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~ 245 (394)
.+.+|||||||+|.+...++++. ..++|+|++..++..|+..+|..... ....+.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~--------------------LlhGi~ 380 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ--------------------LVSSNN 380 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT--------------------TCBTTB
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh--------------------hhcCCC
Confidence 56799999999999999998764 46899999999997773222211000 000000
Q ss_pred cCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC--Chh------------------------h-HH
Q 016155 246 IPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--TAH------------------------N-IV 296 (394)
Q Consensus 246 iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlD--ta~------------------------n-i~ 296 (394)
...+..+|+.+... ...+.||+||++ |... ... + -.
T Consensus 381 -------------~~~I~~dD~L~~~~--~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~ 445 (878)
T 3s1s_A 381 -------------APTITGEDVCSLNP--EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEA 445 (878)
T ss_dssp -------------CCEEECCCGGGCCG--GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHH
T ss_pred -------------cceEEecchhcccc--cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHH
Confidence 12345566665321 124689999988 4221 110 1 22
Q ss_pred HHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 297 EYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 297 ~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
.+++.+.+.|||||++.-+-|--|-+... -....+++.+.+. +.+..
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg----------~~~kkLRk~LLe~-~~I~a 492 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMPKQYLTAQG----------NESKAFREFLVGN-FGLEH 492 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEETHHHHCCS----------HHHHHHHHHHTTT-TCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEChHHhccCC----------hHHHHHHHHHHhC-CCeEE
Confidence 36788899999999998766644322110 1256788877553 44443
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.91 E-value=1.7e-05 Score=70.32 Aligned_cols=45 Identities=9% Similarity=-0.175 Sum_probs=38.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCC-hhHHHHHH-cCCeEEEEeCCHHH
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLG-RLALEISH-LGFISQGNEFSYYM 205 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlG-RLa~eLA~-~Gf~v~G~D~S~~M 205 (394)
|.++|.+.+. .+.+||++|||.| |.|..||. .|++|+++|++...
T Consensus 25 LaeYI~~~~~-----~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A 71 (153)
T 2k4m_A 25 LAVYIIRCSG-----PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH 71 (153)
T ss_dssp HHHHHHHHSC-----SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS
T ss_pred HHHHHHhcCC-----CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccc
Confidence 6677777663 4569999999999 89999997 99999999999855
No 282
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.90 E-value=1.2e-05 Score=81.72 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=37.5
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhh
Q 016155 172 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 211 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~f 211 (394)
+.+|||+|||+|..+..||+.|..|+|+|+|..|+..++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~ 133 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARH 133 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence 6799999999999999999999999999999999987763
No 283
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.79 E-value=8.7e-05 Score=72.34 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=35.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~ 210 (394)
++.+|||+|||.|..+..||.+ +-.|+|+|+|..|+..++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~ 144 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 144 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 5679999999999999999985 258999999999996655
No 284
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.67 E-value=0.00034 Score=64.61 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=67.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
+..+||++||| .-+..||++ |-.|+.+|.+..+...++-.+..+.-+
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~------------------------------ 77 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPA------------------------------ 77 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCC------------------------------
T ss_pred CCCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCC------------------------------
Confidence 35699999985 677888887 789999999999987766443321100
Q ss_pred CCCCCCCCCceeEEecccccc-----------------cC-----CCCCCCCccEEEEecccCChhhHHHHHHHHHHhcc
Q 016155 250 HPASAGITEGFSMCGGDFVEV-----------------YS-----DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 307 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~el-----------------y~-----~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LK 307 (394)
..+++.++.||..+. |. . ...++||+| |||-..- ..|+..+.+.||
T Consensus 78 ------~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlI----fIDg~k~-~~~~~~~l~~l~ 145 (202)
T 3cvo_A 78 ------EGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVV----LVDGRFR-VGCALATAFSIT 145 (202)
T ss_dssp ------TTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEE----EECSSSH-HHHHHHHHHHCS
T ss_pred ------CCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEE----EEeCCCc-hhHHHHHHHhcC
Confidence 012356666665442 10 0 023789998 5676542 488888889999
Q ss_pred CCcEEE
Q 016155 308 DGGVWI 313 (394)
Q Consensus 308 pGG~wI 313 (394)
|||++|
T Consensus 146 ~GG~Iv 151 (202)
T 3cvo_A 146 RPVTLL 151 (202)
T ss_dssp SCEEEE
T ss_pred CCeEEE
Confidence 999998
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.67 E-value=7.7e-05 Score=75.19 Aligned_cols=113 Identities=14% Similarity=0.140 Sum_probs=74.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
++.+||++|-|.|..+.|+.+..- .|+.+|+...++.+++--+ |..... . ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yf------------p~~~~~----~-------~d---- 257 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM------------RKTCGD----V-------LD---- 257 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC------------CC--------C-------CS----
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhc------------hhhhhh----h-------hc----
Confidence 467999999999999999998654 6999999999997765221 111000 0 00
Q ss_pred CCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEecccC---C-----hhhH--HHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCFFID---T-----AHNI--VEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~-~~~~~~fD~VvT~fFlD---t-----a~ni--~~yl~~I~~~LKpGG~wIN 314 (394)
.....++.++.+|..++-.. ....++||+|+.=.|-. + +..+ .++++.++++|||||+++.
T Consensus 258 ----~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 258 ----NLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp ----SSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----cccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 01123478889998764310 01246899998765421 1 1112 4678999999999999995
No 286
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.65 E-value=0.00027 Score=68.34 Aligned_cols=164 Identities=7% Similarity=-0.009 Sum_probs=91.1
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHhhhhhccccccccccccccc
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 229 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~ 229 (394)
+.-.+++..++.+- ++..+|||+|||.|..+...+++ |. .|+|+|++..|.. + |
T Consensus 59 aA~KL~ei~ek~~l----~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~----------~-------p--- 114 (277)
T 3evf_A 59 GTAKLRWFHERGYV----KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHE----------K-------P--- 114 (277)
T ss_dssp HHHHHHHHHHTTSS----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCC----------C-------C---
T ss_pred HHHHHHHHHHhCCC----CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcc----------c-------c---
Confidence 33346677776332 25668999999999999988876 54 5788888865410 0 0
Q ss_pred cccCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh------hHHHHHHHHH
Q 016155 230 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH------NIVEYIEIIS 303 (394)
Q Consensus 230 ~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~------ni~~yl~~I~ 303 (394)
+|.. ..+.++..+.+++ ++.. ...+.||+|++-...++.. .....|+.+.
T Consensus 115 ----------------i~~~-----~~g~~ii~~~~~~-dv~~--l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~ 170 (277)
T 3evf_A 115 ----------------MNVQ-----SLGWNIITFKDKT-DIHR--LEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVE 170 (277)
T ss_dssp ----------------CCCC-----BTTGGGEEEECSC-CTTT--SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ----------------cccC-----cCCCCeEEEeccc-eehh--cCCCCccEEEecCccCcCchHHHHHHHHHHHHHHH
Confidence 0000 0011233444554 2222 2357899999876444221 1123467778
Q ss_pred HhccCC-cEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEE
Q 016155 304 RILKDG-GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMR 382 (394)
Q Consensus 304 ~~LKpG-G~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~ 382 (394)
++|||| |.||- =.|. .+.-...++...+++. |+-++... + .+- ..=...||||+
T Consensus 171 ~~LkpG~G~FV~---KVf~-----------pyg~~~~~l~~~lk~~-F~~V~~~K---P-aSR------~~S~E~Y~V~~ 225 (277)
T 3evf_A 171 KWLACGVDNFCV---KVLA-----------PYMPDVLEKLELLQRR-FGGTVIRN---P-LSR------NSTHEMYYVSG 225 (277)
T ss_dssp HHHTTCCSEEEE---EESC-----------TTSHHHHHHHHHHHHH-HCCEEECC---T-TSC------TTCCCEEEESS
T ss_pred HHhCCCCCeEEE---EecC-----------CCCccHHHHHHHHHHh-cCCEEEEe---C-CCC------CCCCceEEEEe
Confidence 999999 99995 1111 0011234555555553 66554332 1 121 22255788887
Q ss_pred EcCccc
Q 016155 383 KKSVTI 388 (394)
Q Consensus 383 K~~~~~ 388 (394)
.+.+++
T Consensus 226 ~r~n~~ 231 (277)
T 3evf_A 226 ARSNVT 231 (277)
T ss_dssp CCCCHH
T ss_pred cCCCcc
Confidence 776654
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.50 E-value=0.00016 Score=69.41 Aligned_cols=54 Identities=20% Similarity=0.158 Sum_probs=43.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL 213 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~fil 213 (394)
+++.|.+.+.. ++..||||+||+|.++.+++++|..++|+|++..|+..++--+
T Consensus 224 l~~~~i~~~~~----~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 224 LAERLVRMFSF----VGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp HHHHHHHHHCC----TTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHhCC----CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 45555554432 5679999999999999999999999999999999998776433
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.44 E-value=0.00093 Score=64.61 Aligned_cols=158 Identities=13% Similarity=0.120 Sum_probs=87.1
Q ss_pred HHHHHhhcCccc----ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-------CCeEEEEeC
Q 016155 133 IIRNIVRDWAAE----GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-------GFISQGNEF 201 (394)
Q Consensus 133 ~L~q~~RDWS~e----g~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-------Gf~v~G~D~ 201 (394)
.++.+-+||... ...+|-.....++..+...- .+.+||++|+..|+-+..||.. +-.++++|.
T Consensus 70 ~~r~~g~~~~~~~~tmv~~~r~~~L~~l~~~v~~~~------~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dt 143 (282)
T 2wk1_A 70 EVRNEGRDWPANAHTMIGIKRLENIRQCVEDVIGNN------VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADS 143 (282)
T ss_dssp HHHHTTCSCBSSCSCSSHHHHHHHHHHHHHHHHHTT------CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEEC
T ss_pred HHHhccccCCcccccccCHHHHHHHHHHHHHHHhcC------CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEEC
Confidence 477888999653 34677665555555555321 4569999999999988887643 567999996
Q ss_pred CHHHHHHHhhhhhccccccccccccccccccC-CCCcccCccccccCCCCCCCCCC-CCceeEEecccccccCCCCCCCC
Q 016155 202 SYYMMICSSFILNHTETAGEWNIYPWIHSNCN-SLSDSDQLRPVSIPDIHPASAGI-TEGFSMCGGDFVEVYSDPSQVGA 279 (394)
Q Consensus 202 S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn-~~~~~~qlr~v~iPDv~p~~~~~-~~~ls~~~GDf~ely~~~~~~~~ 279 (394)
-..+-.... +.........+ +.+.. ......+.|. .+. .... .+++.++.|||.+... ....++
T Consensus 144 feG~pe~~~---~~~~~d~~~~~----~~~~~~~~~~~~~ar~-n~~-----~~gl~~~~I~li~Gda~etL~-~~~~~~ 209 (282)
T 2wk1_A 144 FQGIPDVGE---DGYAGDRKMAL----HRRNSVLAVSEEEVRR-NFR-----NYDLLDEQVRFLPGWFKDTLP-TAPIDT 209 (282)
T ss_dssp SSCSCCCCT---TSCHHHHHHCG----GGGHHHHCCCHHHHHH-HHH-----HTTCCSTTEEEEESCHHHHST-TCCCCC
T ss_pred CCCCCcccc---ccccccccccc----ccccccchhHHHHHHH-HHH-----HcCCCcCceEEEEeCHHHHHh-hCCCCC
Confidence 432200000 00000000000 00000 0000000000 000 0011 2458999999988543 122456
Q ss_pred ccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEE
Q 016155 280 WDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 280 fD~VvT~fFlDta--~ni~~yl~~I~~~LKpGG~wIN 314 (394)
||+| |||.. ++..+||+.++..|+|||++|-
T Consensus 210 ~d~v----fIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 210 LAVL----RMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp EEEE----EECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEE----EEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 7776 66754 3567899999999999999984
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.36 E-value=0.0019 Score=64.91 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=82.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
++.+|||+||+.|..++.|+++|-.|+|+|... |-- .+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~----~l~------------------------------------ 249 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQ----SLM------------------------------------ 249 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCH----HHH------------------------------------
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cCh----hhc------------------------------------
Confidence 688999999999999999999999999999863 310 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC---cEEEEe-cCcchhhhhcc
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG---GVWINL-GPLLYHFADLY 326 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpG---G~wIN~-GPLlyh~~~~~ 326 (394)
...++.++.+|+.++.. ..+.||+||+ |-+.+....++.+.++|..| +..+|+ -|+.-.+.
T Consensus 250 -----~~~~V~~~~~d~~~~~~---~~~~~D~vvs----Dm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~--- 314 (375)
T 4auk_A 250 -----DTGQVTWLREDGFKFRP---TRSNISWMVC----DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE--- 314 (375)
T ss_dssp -----TTTCEEEECSCTTTCCC---CSSCEEEEEE----CCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH---
T ss_pred -----cCCCeEEEeCccccccC---CCCCcCEEEE----cCCCChHHhHHHHHHHHhccccceEEEEEEecccchHH---
Confidence 01237788999887542 2468999987 77777777777777777765 555553 22222222
Q ss_pred CCCCCccccCCHHHHHHHHHhCCCEEE
Q 016155 327 GQEDEMSIELSLEDVKRVALHYGFEFE 353 (394)
Q Consensus 327 g~~~~~~ieLS~eEl~~ll~~~GF~ii 353 (394)
.+.-..+.+.+.+...||...
T Consensus 315 ------~l~~~~~~i~~~l~~~g~~~~ 335 (375)
T 4auk_A 315 ------EVSHNLAYIQAQLDEHGINAQ 335 (375)
T ss_dssp ------HHHHHHHHHHHHHHHTTCCEE
T ss_pred ------HHHHHHHHHHHHHHhcCcchh
Confidence 122245677778888898743
No 290
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.16 E-value=0.013 Score=57.41 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=34.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~-v~G~D~S~~ML~~s~ 210 (394)
.+.+|||+-||.|.+...+.++|++ |.++|++...+.+.+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~ 50 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYE 50 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHH
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHH
Confidence 4579999999999999999999997 568999998875544
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.12 E-value=0.0034 Score=65.48 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=31.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~---------------Gf~v~G~D~S~~ML~~s~ 210 (394)
.+.+||||+||+|.+.....+. -....|+|+...|...++
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~ 271 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQ 271 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHH
Confidence 5679999999999997665432 245899999999876655
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.87 E-value=0.0019 Score=62.68 Aligned_cols=40 Identities=13% Similarity=-0.109 Sum_probs=36.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~ 210 (394)
++..+||.+||.|..+..|++++..|+|+|.+..|+..++
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~ 61 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAK 61 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 5679999999999999999999889999999999997665
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.85 E-value=0.0011 Score=64.10 Aligned_cols=50 Identities=8% Similarity=-0.106 Sum_probs=36.6
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHH
Q 016155 152 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYM 205 (394)
Q Consensus 152 ~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~~M 205 (394)
+.-.+++..++. .- .++.+|||+|||.|..+...+++ |. .|.|+|++..|
T Consensus 75 AAfKL~ei~eK~-~L---k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~ 126 (282)
T 3gcz_A 75 GSAKLRWMEERG-YV---KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQG 126 (282)
T ss_dssp HHHHHHHHHHTT-SC---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT
T ss_pred HHHHHHHHHHhc-CC---CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCc
Confidence 334466666664 22 25669999999999999988854 54 57899999765
No 294
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.76 E-value=0.015 Score=58.10 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=33.1
Q ss_pred CeEEEecCCCChhHHHHHHcCCeE-EEEeCCHHHHHHHh
Q 016155 173 PACLVPGAGLGRLALEISHLGFIS-QGNEFSYYMMICSS 210 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~~Gf~v-~G~D~S~~ML~~s~ 210 (394)
.+|||+-||.|.++..|.+.||++ .|+|++...+.+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~ 41 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHA 41 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 589999999999999999999985 59999998875443
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.73 E-value=0.0027 Score=61.02 Aligned_cols=96 Identities=15% Similarity=0.100 Sum_probs=58.9
Q ss_pred CCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHH--HHHHHhhhhhccccccccccccccccccCCCCcccCccccc
Q 016155 170 ESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYY--MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 245 (394)
Q Consensus 170 ~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~~--ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~ 245 (394)
+++.+|||+||+-|.-+...|++ |. .|.|..+... ++ ++.
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~------------------------------------P~~ 115 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEE------------------------------------PML 115 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCC------------------------------------CCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccC------------------------------------CCc
Confidence 37889999999999999999886 22 3445444331 10 000
Q ss_pred cCCCCCCCCCCCCc-eeEEec-ccccccCCCCCCCCccEEEEec-------ccCChhhHHHHHHHHHHhccCCc-EEEE
Q 016155 246 IPDIHPASAGITEG-FSMCGG-DFVEVYSDPSQVGAWDAVVTCF-------FIDTAHNIVEYIEIISRILKDGG-VWIN 314 (394)
Q Consensus 246 iPDv~p~~~~~~~~-ls~~~G-Df~ely~~~~~~~~fD~VvT~f-------FlDta~ni~~yl~~I~~~LKpGG-~wIN 314 (394)
.+ ..+-+ +.|..| ||+++. ...+|+|++=. .+|.+.-+. .|+-..++||||| .|+-
T Consensus 116 --~~-----~~Gv~~i~~~~G~Df~~~~-----~~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~~Lk~gG~~Fvv 181 (269)
T 2px2_A 116 --MQ-----SYGWNIVTMKSGVDVFYKP-----SEISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSDWLSRGPKEFCI 181 (269)
T ss_dssp --CC-----STTGGGEEEECSCCGGGSC-----CCCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHHHHTTCCSEEEE
T ss_pred --cc-----CCCceEEEeeccCCccCCC-----CCCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHHHhhcCCcEEEE
Confidence 00 00101 456668 999853 35799999743 334433222 5666669999999 7874
No 296
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.71 E-value=0.044 Score=52.53 Aligned_cols=148 Identities=15% Similarity=0.124 Sum_probs=88.4
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEE-EEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCC
Q 016155 173 PACLVPGAGLGRLALEISHLGFISQ-GNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 251 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~~Gf~v~-G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p 251 (394)
.+|||+=||.|.+..-|.+.||++. ++|++.....+.+ .|+..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~--~N~~~---------------------------------- 44 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYE--SNHSA---------------------------------- 44 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHH--HHCCS----------------------------------
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHH--HHCCC----------------------------------
Confidence 3799999999999999999999865 9999998775433 22210
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEec-------------ccCChhhHHHHHHHHHHhccCCcEEE-EecC
Q 016155 252 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-------------FIDTAHNIVEYIEIISRILKDGGVWI-NLGP 317 (394)
Q Consensus 252 ~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~f-------------FlDta~ni~~yl~~I~~~LKpGG~wI-N~GP 317 (394)
.++.+|..++.. ..-...|+|+-.+ +-|.-..+...+-.|.+.+||--.++ |+--
T Consensus 45 ---------~~~~~DI~~i~~--~~~~~~D~l~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~g 113 (331)
T 3ubt_Y 45 ---------KLIKGDISKISS--DEFPKCDGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKG 113 (331)
T ss_dssp ---------EEEESCGGGCCG--GGSCCCSEEECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCG
T ss_pred ---------CcccCChhhCCH--hhCCcccEEEecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeecc
Confidence 123344444321 1112345555332 22333335544445566689976665 4433
Q ss_pred cchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 016155 318 LLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 318 Llyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~K~ 384 (394)
++.+-. .-..+++.+.++++||.+...-.-...|+..... ...|+|+.|+
T Consensus 114 l~~~~~-----------~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ~R------~Rvfivg~r~ 163 (331)
T 3ubt_Y 114 MMAQRH-----------NKAVQEFIQEFDNAGYDVHIILLNANDYGVAQDR------KRVFYIGFRK 163 (331)
T ss_dssp GGGCTT-----------SHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSBCC------EEEEEEEEEG
T ss_pred cccccc-----------cchhhhhhhhhccCCcEEEEEecccccCCCCccc------ceEEEEEEcC
Confidence 332211 1246788888999999876554444567654432 5678888876
No 297
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.65 E-value=0.017 Score=56.81 Aligned_cols=39 Identities=10% Similarity=0.004 Sum_probs=33.7
Q ss_pred CCeEEEecCCCChhHHHHHHcC--Ce-EEEEeCCHHHHHHHh
Q 016155 172 PPACLVPGAGLGRLALEISHLG--FI-SQGNEFSYYMMICSS 210 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~G--f~-v~G~D~S~~ML~~s~ 210 (394)
+.+|||+-||.|.+...|..+| +. |.++|++...+.+.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~ 43 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYK 43 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHH
Confidence 4589999999999999999999 44 789999998876544
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.55 E-value=0.0045 Score=60.40 Aligned_cols=73 Identities=12% Similarity=-0.004 Sum_probs=46.4
Q ss_pred cchHHHHHHHHHHhhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCC
Q 016155 125 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFS 202 (394)
Q Consensus 125 ~d~~kv~~~L~q~~RDWS~eg~~ER~~~y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S 202 (394)
.|...+|..|+.=... +..=|..++-.+++..++.+- +++.+|||+||+.|..+..++++ |. .|.|+|++
T Consensus 43 ~dr~~ar~~l~~~~~~----~g~yrSRaa~KL~ei~ek~l~----~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg 114 (300)
T 3eld_A 43 VDRTAARRYLKEGRTD----VGISVSRGAAKIRWLHERGYL----RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLG 114 (300)
T ss_dssp ECCHHHHHHHHHTCSS----SCCCSSTTHHHHHHHHHHTSC----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred ccHHHHHHHHHcCCcc----CCCccchHHHHHHHHHHhCCC----CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEec
Confidence 4455666666553211 011133333456666666221 26789999999999999999975 53 57899998
Q ss_pred HHH
Q 016155 203 YYM 205 (394)
Q Consensus 203 ~~M 205 (394)
..|
T Consensus 115 ~~~ 117 (300)
T 3eld_A 115 IEG 117 (300)
T ss_dssp CTT
T ss_pred ccc
Confidence 754
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.20 E-value=0.0084 Score=56.26 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=41.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~ 210 (394)
+++.|-+.+. .++..||||.||+|..+.+.+++|..+.|+|++..++..++
T Consensus 201 l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 201 LIERIIRASS----NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHC----CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 4555544443 25679999999999999999999999999999999987665
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.06 E-value=0.021 Score=56.90 Aligned_cols=108 Identities=16% Similarity=0.062 Sum_probs=69.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf--~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||..||-|.=+..||.++- .++++|.|..=+...+-.+.+..- +.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~-----------------------~~----- 199 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP-----------------------EE----- 199 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSC-----------------------TT-----
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhh-----------------------hh-----
Confidence 678999999999999999999876 699999999876443322221100 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---e-----ccc---------CChhhH-------HHHHHHHHH
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---C-----FFI---------DTAHNI-------VEYIEIISR 304 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT---~-----fFl---------Dta~ni-------~~yl~~I~~ 304 (394)
.....++.....|...+.. ...+.||.|+. | -.+ .+..++ .+.|+...+
T Consensus 200 -----~~~~~~v~v~~~D~~~~~~--~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~ 272 (359)
T 4fzv_A 200 -----IRDGNQVRVTSWDGRKWGE--LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLL 272 (359)
T ss_dssp -----TTTSSSEEEECCCGGGHHH--HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHH
T ss_pred -----hccCCceEEEeCchhhcch--hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 0112346777788776532 12478998872 1 111 112222 246778889
Q ss_pred hccCCcEEE
Q 016155 305 ILKDGGVWI 313 (394)
Q Consensus 305 ~LKpGG~wI 313 (394)
+|||||++|
T Consensus 273 ~lkpGG~LV 281 (359)
T 4fzv_A 273 ATKPGGHVV 281 (359)
T ss_dssp TEEEEEEEE
T ss_pred cCCCCcEEE
Confidence 999999998
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.54 E-value=0.13 Score=50.36 Aligned_cols=158 Identities=11% Similarity=0.065 Sum_probs=86.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
+...|+.+|||+...++.|... +..+.-+|+ +.++..-+.++........ .+. . .. .-|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~-~l~----~-------~~-----~~~~ 158 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRI-SLG----L-------SK-----EDTA 158 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHH-HHT----C-------CS-----SCCC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhh-hcc----c-------cc-----cccc
Confidence 4568999999999999999875 456667777 5555433333322100000 000 0 00 0000
Q ss_pred CCCCCCCCCCceeEEeccccccc-------CCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVY-------SDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely-------~~~~~~~~fD~VvT~---fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
.... .....+..++.+|+++.. ..+ ..+...++++- .||+.. .+...|+.|.+.+ |||.+|++.++
T Consensus 159 ~~~~-~~~~~~~~~v~~DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~-~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 159 KSPF-LIDQGRYKLAACDLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNN-ESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTE-EEECSSEEEEECCTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHH-HHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cccc-ccCCCceEEEecCCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHH-HHHHHHHHHHhhC-CCcEEEEEecc
Confidence 0000 001245788999998731 111 12334444432 466655 4778899998877 88999865322
Q ss_pred -------------chhhhhccCCCCCccc--cCCHHHHHHHHHhCCCE
Q 016155 319 -------------LYHFADLYGQEDEMSI--ELSLEDVKRVALHYGFE 351 (394)
Q Consensus 319 -------------lyh~~~~~g~~~~~~i--eLS~eEl~~ll~~~GF~ 351 (394)
.+++....| .+..++ -.+.++..+.+.+.||+
T Consensus 235 ~~~~~~~~fg~~m~~~l~~~rg-~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 235 GGSQPNDRFGAIMQSNLKESRN-LEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCCSTTCCHHHHHHHHHHHHHC-CCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCCCCcchHHHHHHHHhhcccC-CcccccccCCCHHHHHHHHHHCCCC
Confidence 122322111 121222 25899999999999998
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.44 E-value=0.14 Score=50.07 Aligned_cols=40 Identities=10% Similarity=-0.049 Sum_probs=33.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eE--EEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF--IS--QGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf--~v--~G~D~S~~ML~~s~ 210 (394)
.+.+|||+-||.|.+..-|.+.|+ ++ .|+|++.....+.+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~ 52 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYS 52 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHH
Confidence 467999999999999999999995 54 59999998875443
No 303
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.10 E-value=0.061 Score=52.81 Aligned_cols=91 Identities=19% Similarity=0.227 Sum_probs=53.8
Q ss_pred EEecccccccCCCCCCCCccEEEEecc------cCC----hhhHHHH-HHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 016155 262 MCGGDFVEVYSDPSQVGAWDAVVTCFF------IDT----AHNIVEY-IEIISRILKDGGVWINLGPLLYHFADLYGQED 330 (394)
Q Consensus 262 ~~~GDf~ely~~~~~~~~fD~VvT~fF------lDt----a~ni~~y-l~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~ 330 (394)
++.||+.+++. .+.||+|++=.. .|. ...+.++ ++-+.+.|||||.|+-- -|+.
T Consensus 156 ~IqGD~~~~~~----~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK-----VFQG------ 220 (344)
T 3r24_A 156 TLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK-----ITEH------ 220 (344)
T ss_dssp EEESCGGGEEE----SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE-----ECSS------
T ss_pred EEEcccccccc----CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE-----EecC------
Confidence 38899887654 478999997542 222 2235554 55556789999999841 1221
Q ss_pred CccccCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 016155 331 EMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 331 ~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~~Y~~d~~sm~~~~Y~~~f~va~K~ 384 (394)
+ . .+++.++. + -|+.++..- .+ +..+| ...|+|++..
T Consensus 221 --s-g--~~~L~~lr-k-~F~~VK~fK-~A---SRa~S------sEvYLVG~gf 257 (344)
T 3r24_A 221 --S-W--NADLYKLM-G-HFSWWTAFV-TN---VNASS------SEAFLIGANY 257 (344)
T ss_dssp --S-C--CHHHHHHH-T-TEEEEEEEE-EG---GGTTS------SCEEEEEEEE
T ss_pred --C-C--HHHHHHHH-h-hCCeEEEEC-CC---CCCCC------eeEEEEeeec
Confidence 1 1 25566665 3 698887552 11 11222 5577777654
No 304
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.07 E-value=0.27 Score=48.13 Aligned_cols=37 Identities=11% Similarity=0.042 Sum_probs=31.8
Q ss_pred CeEEEecCCCChhHHHHHHcCC--e-EEEEeCCHHHHHHH
Q 016155 173 PACLVPGAGLGRLALEISHLGF--I-SQGNEFSYYMMICS 209 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~~Gf--~-v~G~D~S~~ML~~s 209 (394)
.+|||+=||.|.+..-|.+.|+ + |.++|++.....+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty 43 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVY 43 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHH
Confidence 5899999999999999999997 4 56999999887543
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.01 E-value=0.014 Score=57.27 Aligned_cols=72 Identities=24% Similarity=0.436 Sum_probs=52.6
Q ss_pred eeEEecccccccCCCCCCCCccEEEEecccC---ChhhH----HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCc
Q 016155 260 FSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAHNI----VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEM 332 (394)
Q Consensus 260 ls~~~GDf~ely~~~~~~~~fD~VvT~fFlD---ta~ni----~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~ 332 (394)
+.+..||+.+.... .....||+| |+| .+.|. .++|+.|+++|+|||+|+. |.
T Consensus 168 L~l~~GDa~~~l~~-l~~~~~Da~----flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT-----Yt----------- 226 (308)
T 3vyw_A 168 LKVLLGDARKRIKE-VENFKADAV----FHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS-----YS----------- 226 (308)
T ss_dssp EEEEESCHHHHGGG-CCSCCEEEE----EECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE-----SC-----------
T ss_pred EEEEechHHHHHhh-hcccceeEE----EeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE-----Ee-----------
Confidence 67889998875431 123467877 445 34444 4789999999999999984 21
Q ss_pred cccCCHHHHHHHHHhCCCEEEEEe
Q 016155 333 SIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 333 ~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+.-.+++.|.++||++.+..
T Consensus 227 ----aag~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 227 ----SSLSVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp ----CCHHHHHHHHHTTCEEEEEE
T ss_pred ----CcHHHHHHHHHCCCEEEecC
Confidence 34678899999999998865
No 306
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.88 E-value=0.019 Score=50.60 Aligned_cols=37 Identities=22% Similarity=0.142 Sum_probs=30.3
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
++.+||+.|+ |.|+.+..+++ .|+.|.+++.+...+.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~ 77 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 77 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 6789999994 77888777665 6999999999988764
No 307
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=94.68 E-value=0.085 Score=51.66 Aligned_cols=44 Identities=11% Similarity=-0.026 Sum_probs=31.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCH
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSY 203 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~ 203 (394)
+++.+++ +.- +.+.+|||+||+.|..+...|.+ |. .|.|+|+-.
T Consensus 83 L~ei~~~-~~l---~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 83 LRWLVER-RFL---EPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp HHHHHHT-TSC---CCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCS
T ss_pred HHHHHHh-cCC---CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCC
Confidence 5455555 322 25669999999999999866555 65 489999876
No 308
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.11 E-value=0.98 Score=46.57 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=41.6
Q ss_pred HHHHHhhCCCCCC---CCCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHH
Q 016155 157 LEELDALFPNRSK---ESPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICS 209 (394)
Q Consensus 157 l~~L~~~~p~~~~---~~~~~VLvpGCGlGRLa~eLA~~Gf~-v~G~D~S~~ML~~s 209 (394)
++.|+.++|.... +...+|||+=||.|.+..-|.+.||. |.++|++.....+.
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty 126 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTY 126 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHH
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHH
Confidence 4667777775322 24679999999999999999999998 57999999776543
No 309
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.07 E-value=0.023 Score=56.19 Aligned_cols=40 Identities=23% Similarity=0.148 Sum_probs=33.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|||. |.++..||+ +|. .|.++|.|...+..++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 678999999986 899999987 598 8999999998875443
No 310
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.93 E-value=0.046 Score=52.58 Aligned_cols=41 Identities=12% Similarity=0.229 Sum_probs=33.9
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.|+|. |.++..||+ +|..|.++|.|..-+..++
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 207 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR 207 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 3678999999975 999999987 4999999999998775443
No 311
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=93.83 E-value=0.077 Score=51.70 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=33.4
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.|+|. |.++..+|+ +|. .|.++|.|..-+..++
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~ 232 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK 232 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 3678999999986 888888887 598 6999999988775443
No 312
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.79 E-value=0.097 Score=50.74 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=32.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCe-EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISHL-GFI-SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~~-Gf~-v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..||+. |.. |.++|.|..-+..++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 221 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 678999999876 8888888875 887 999999988775444
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.65 E-value=0.096 Score=49.91 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=55.2
Q ss_pred ceeEEecccccccCCCCCCCCccEEEEe--cccCC------------------hhhHHHHHHHHHHhccCCcEEE-EecC
Q 016155 259 GFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------------AHNIVEYIEIISRILKDGGVWI-NLGP 317 (394)
Q Consensus 259 ~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDt------------------a~ni~~yl~~I~~~LKpGG~wI-N~GP 317 (394)
...++.||.+++... ..+++||+|||. |+... ...+.+.++.++++|||||.++ ++|.
T Consensus 21 ~~~i~~gD~~~~l~~-l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLAS-FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTT-SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCEEEECcHHHHHhh-CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 368899999885321 235799999998 54211 0113456778999999999875 4553
Q ss_pred cchhhhhccCCCCCccccCC-HHHHHHHHHhCCCEEEEE
Q 016155 318 LLYHFADLYGQEDEMSIELS-LEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 318 Llyh~~~~~g~~~~~~ieLS-~eEl~~ll~~~GF~ii~e 355 (394)
....... .+ ....++ .+++..++++.||.+..+
T Consensus 100 ~~~~~~~-~g----~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 100 VAVARRR-FG----RHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp EEEECC---------EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred Ccccccc-CC----cccccccHHHHHHHHHHcCCeeecc
Confidence 3211000 00 000112 467888999999987763
No 314
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.57 E-value=0.18 Score=48.90 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=32.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+|. |.++..||+ +|. .|.++|.|..-+..+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 212 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA 212 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 678999999985 888888887 598 899999998766433
No 315
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.57 E-value=0.16 Score=48.95 Aligned_cols=38 Identities=16% Similarity=-0.005 Sum_probs=31.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+|. |.++..||+ +|..|.+++.|..-+..
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 215 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQD 215 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 678999999975 888888887 49999999998876643
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.52 E-value=0.087 Score=51.61 Aligned_cols=40 Identities=13% Similarity=0.134 Sum_probs=32.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..||+ +|+ .|.+++.+..-+..++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 224 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAE 224 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 678999999876 888888887 498 8999999987765443
No 317
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.48 E-value=0.3 Score=46.62 Aligned_cols=38 Identities=21% Similarity=0.177 Sum_probs=31.7
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+ |.|..+..+++ +|+.|.+++.+...+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~ 185 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY 185 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 6789999998 88988777765 69999999999877643
No 318
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.44 E-value=0.11 Score=50.83 Aligned_cols=39 Identities=18% Similarity=0.156 Sum_probs=32.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+|. |.++..||+ +|..|.+++.|..-+..+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a 234 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA 234 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 678999999984 888888887 599999999998776443
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.38 E-value=0.079 Score=51.24 Aligned_cols=40 Identities=13% Similarity=-0.067 Sum_probs=32.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~~-Gf-~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..+|+. |. .|.++|.+..-+..++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 208 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL 208 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 678999999886 8888888875 88 7999999987664443
No 320
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.99 E-value=0.11 Score=51.46 Aligned_cols=41 Identities=20% Similarity=0.071 Sum_probs=32.9
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.|+|. |.++..||+ +|. .|.++|.|..-+..++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4678999999865 888888886 499 8999999987765443
No 321
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.75 E-value=0.13 Score=49.58 Aligned_cols=40 Identities=20% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..||+ +|+.|.+++.|..-+..++
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 678999999875 888888877 5999999999987765433
No 322
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.45 E-value=0.064 Score=51.62 Aligned_cols=39 Identities=21% Similarity=0.180 Sum_probs=32.1
Q ss_pred CCCCeEEEecCC--CChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 170 ESPPACLVPGAG--LGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 170 ~~~~~VLvpGCG--lGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
+++.+||+.|+| .|.++..+|+ +|..|.+++.|..-+..
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 184 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEE 184 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 367899999986 8999988877 59999999988766543
No 323
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.41 E-value=0.13 Score=49.54 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=33.0
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+ |.|.++..+|+ +|+.|.+++.+..-+..+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~ 207 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA 207 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 36789999998 78999888876 699999999998776443
No 324
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.30 E-value=0.075 Score=50.88 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=31.8
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
+++.+||+.|+ |.|.++..+|+ +|+.|.+++.|..-+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 188 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCR 188 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 36789999998 78999888875 5999999999987654
No 325
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.27 E-value=0.56 Score=45.71 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=33.0
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CC-eEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPGAG-LGRLALEISHL-GF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpGCG-lGRLa~eLA~~-Gf-~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.|+| .|.++..+|+. |+ .|.++|.|..-+..++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 367899999997 58888888875 98 7999999887765443
No 326
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.26 E-value=0.075 Score=51.28 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=31.7
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+ |.|+++..+++ +|+.|.+++.|...+..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~ 209 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL 209 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH
Confidence 6789999998 68999888876 69999999988776643
No 327
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.19 E-value=0.11 Score=49.76 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=31.6
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
++.+||+.|+ |.|.++..+|+ +|+.|.+++.+..-+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~ 194 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD 194 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6789999997 78999888876 6999999999987664
No 328
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.13 E-value=0.074 Score=50.95 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=32.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+ |.|.++..+|+ +|..|.+++.+..-+..+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 189 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA 189 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 36789999994 78998888876 599999999988776443
No 329
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.04 E-value=0.24 Score=47.04 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=29.7
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 016155 174 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 209 (394)
Q Consensus 174 ~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s 209 (394)
+||+.|+ |.|.++..||+. |..|.+++-|..-+..+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~ 187 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL 187 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4999997 789999999875 99999999988766433
No 330
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=91.97 E-value=0.59 Score=44.54 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=59.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 171 SPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-Gf-~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
++.+|||+||+.|..+...|.+ |. .|.|+|+-..= + +.| .
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~g---------h--------e~P---------------------~ 119 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPG---------H--------EEP---------------------V 119 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTT---------S--------CCC---------------------C
T ss_pred CCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCC---------c--------cCc---------------------c
Confidence 6679999999999999866655 54 58899986511 0 111 1
Q ss_pred CCCCCCCC-CCceeEEec-ccccccCCCCCCCCccEEEEec-------ccCChhhHHHHHHHHHHhccCCcEEE
Q 016155 249 IHPASAGI-TEGFSMCGG-DFVEVYSDPSQVGAWDAVVTCF-------FIDTAHNIVEYIEIISRILKDGGVWI 313 (394)
Q Consensus 249 v~p~~~~~-~~~ls~~~G-Df~ely~~~~~~~~fD~VvT~f-------FlDta~ni~~yl~~I~~~LKpGG~wI 313 (394)
... .. -+.+.|..| |+..+. ...+|.|++=. .+|-+. -.+.|+-+.++|++ |-|+
T Consensus 120 ~~~---s~gwn~v~fk~gvDv~~~~-----~~~~DtllcDIgeSs~~~~vE~~R-tlrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 120 PMS---TYGWNIVKLMSGKDVFYLP-----PEKCDTLLCDIGESSPSPTVEESR-TIRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp CCC---CTTTTSEEEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHH-HHHHHHHHGGGCSS-CEEE
T ss_pred hhh---hcCcCceEEEeccceeecC-----CccccEEEEecCCCCCChhhhhhH-HHHHHHHHHHhccc-CCEE
Confidence 110 11 134889999 875442 26699998643 122221 22366667799999 6665
No 331
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.94 E-value=0.16 Score=49.02 Aligned_cols=39 Identities=23% Similarity=0.176 Sum_probs=32.1
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMIC 208 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~~ 208 (394)
+++.+||+.|+ |.|.++..+|+. |+.|.+++.+..-+..
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 199 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF 199 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 36789999997 789998888764 9999999998766543
No 332
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=91.87 E-value=0.3 Score=48.41 Aligned_cols=36 Identities=11% Similarity=-0.189 Sum_probs=32.3
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHH
Q 016155 172 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMI 207 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~--Gf~v~G~D~S~~ML~ 207 (394)
+..||++|.|+|-|+..|+.+ +-.|+++|+...++-
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~ 96 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK 96 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH
Confidence 578999999999999999987 668999999998763
No 333
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.84 E-value=0.43 Score=45.17 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=30.5
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHH
Q 016155 170 ESPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMI 207 (394)
Q Consensus 170 ~~~~~VLvpGCG-lGRLa~eLA~~-Gf~v~G~D~S~~ML~ 207 (394)
+++.+||+.|+| .|.++..||+. |..|.+++ |..-+.
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~ 179 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQA 179 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHH
Confidence 478899999997 58888888875 99999999 876554
No 334
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=91.80 E-value=3.1 Score=46.67 Aligned_cols=40 Identities=15% Similarity=-0.090 Sum_probs=34.2
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCC-e-EEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGLGRLALEISHLGF-I-SQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGlGRLa~eLA~~Gf-~-v~G~D~S~~ML~~s 209 (394)
....++||+=||.|.+..-|.+.|+ . |.|+|+......+.
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty 579 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAF 579 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHH
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHH
Confidence 3667999999999999999999998 4 66999999887543
No 335
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.75 E-value=0.077 Score=50.74 Aligned_cols=40 Identities=23% Similarity=0.175 Sum_probs=32.5
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpG--CGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.| .|.|.++..+|+ +|..|.+++.+..-+..+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 181 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA 181 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3678999998 478999888876 599999999998776443
No 336
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=91.37 E-value=0.41 Score=46.28 Aligned_cols=52 Identities=13% Similarity=-0.017 Sum_probs=42.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 211 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~f 211 (394)
+++.|-+.+. .++..||||=||.|..+.+-.++|....|+|++..+...+.-
T Consensus 241 l~~~~i~~~~----~~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 241 LPEFFIRMLT----EPDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAF 292 (323)
T ss_dssp HHHHHHHHHC----CTTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHG
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHH
Confidence 4455444443 257799999999999999999999999999999999876653
No 337
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=91.37 E-value=2.9 Score=42.06 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=33.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--Ce-----EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLG--FI-----SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G--f~-----v~G~D~S~~ML~~s~ 210 (394)
+..+||++=||.|.+..-|.+.| +. |.++|++...+.+.+
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~ 55 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYV 55 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHH
Confidence 56799999999999999998888 33 568999998876544
No 338
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.28 E-value=1.1 Score=43.57 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=31.9
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+|. |.++..+|+ +|. .|.+++.|..-+..+
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~ 233 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA 233 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 3678999999874 888888877 598 799999988776543
No 339
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=91.26 E-value=0.49 Score=45.96 Aligned_cols=40 Identities=20% Similarity=0.062 Sum_probs=31.8
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~~-Gf-~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+|. |.++..||+. |. .|.++|.|..-+..+
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 232 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA 232 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 3678999999874 8888888874 98 799999988766443
No 340
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.24 E-value=0.2 Score=48.21 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=31.1
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~-~Gf-~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+| .|.++..+|+ +|+ .|.+++.|..-+..+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 56789999987 4888888876 599 999999998766433
No 341
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=91.13 E-value=1 Score=43.62 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=32.2
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.|+|. |.++..||+ +|. .|.+++.|..-+..++
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~ 232 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 3678999999875 888888887 498 7999999887764433
No 342
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=90.99 E-value=0.44 Score=46.26 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=32.3
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+|. |.++..+|+ +|..|.+++.+..-+..+
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 229 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRA 229 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHH
Confidence 3678999999875 888888877 499999999998766443
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.86 E-value=0.22 Score=47.83 Aligned_cols=38 Identities=16% Similarity=0.230 Sum_probs=31.0
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+| .|.++..+|+ +|..|.+++.|..-+..
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 203 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLEL 203 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 67799999986 6888888776 59999999999876643
No 344
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.84 E-value=0.15 Score=49.51 Aligned_cols=38 Identities=18% Similarity=0.059 Sum_probs=30.9
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+| .|.++..+|+ +|..|.+++.|..-+..
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~ 218 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED 218 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence 67899999986 4888888877 59999999988766543
No 345
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.70 E-value=0.6 Score=45.34 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+|. |.++..+|+ +|. .|.+++.|..-+..+
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~ 232 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA 232 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 3678999999875 888888876 598 799999988776443
No 346
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.64 E-value=0.096 Score=49.43 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=30.8
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
++.+||+.|+ |.|.++..+|+ +|..|.+++.+..-+.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 164 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA 164 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6789999998 78999888876 5999999999876553
No 347
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.61 E-value=0.2 Score=48.85 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=31.5
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpG--CGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.| .|.|.++..+|+ +|+.|.+++.+..-+..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~ 203 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF 203 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 678999999 578999888876 59999999999766543
No 348
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.54 E-value=0.12 Score=49.38 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=30.8
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.|+ |.|..+..+++ +|+.|.+++.+..-+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~ 185 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET 185 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 6789999995 78998777765 69999999999866543
No 349
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.49 E-value=0.16 Score=49.28 Aligned_cols=38 Identities=26% Similarity=0.274 Sum_probs=31.2
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
+++.+||+.|+ |.|..+..+|+ +|+.|.+++.+..-+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 209 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK 209 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH
Confidence 36789999996 78888877765 6999999999987664
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.49 E-value=0.22 Score=47.90 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=31.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc---CCeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEISHL---GFISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~~---Gf~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+|. |.++..||+. |..|.+++.|..-+..+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~ 212 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA 212 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence 466999999874 8888888764 99999999998776443
No 351
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.49 E-value=0.11 Score=49.42 Aligned_cols=38 Identities=18% Similarity=0.144 Sum_probs=31.1
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpG--CGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~ 208 (394)
++.+||+.| .|.|..+..+++ +|+.|.+++.+..-+..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~ 180 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 180 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 678999999 578888777765 69999999999876643
No 352
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.29 E-value=1.4 Score=42.65 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=31.7
Q ss_pred CCCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCG-lGRLa~eLA~-~Gf-~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+| .|.++..||+ +|. .|.++|.|..-+..+
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 236 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 367899999987 4888888887 498 799999988766433
No 353
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.16 E-value=0.15 Score=49.12 Aligned_cols=36 Identities=25% Similarity=0.327 Sum_probs=29.1
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~-~Gf-~v~G~D~S~~ML 206 (394)
++.+||+.|+| .|.++..+|+ +|. .|.+++.|..-+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 202 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL 202 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 46789999976 4788888877 599 899999997654
No 354
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.12 E-value=0.32 Score=47.04 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHHh
Q 016155 170 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICSS 210 (394)
Q Consensus 170 ~~~~~VLvpG--CGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s~ 210 (394)
+++.+||+.| .|.|.++..+|+ +|+.|.+++.|..-+..++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 209 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE 209 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4678999995 468999888876 5999999999987765433
No 355
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.96 E-value=0.49 Score=50.11 Aligned_cols=74 Identities=22% Similarity=0.301 Sum_probs=51.5
Q ss_pred ceeEEecccccccCC-CC-CCCCccEEEEecccCCh---hhH----HHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 259 GFSMCGGDFVEVYSD-PS-QVGAWDAVVTCFFIDTA---HNI----VEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 259 ~ls~~~GDf~ely~~-~~-~~~~fD~VvT~fFlDta---~ni----~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
.+.++.||..+.... +. ..+.+|++ |+|-. .|. .++|..+.+++||||.+.-+.
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~----flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------------- 211 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAW----FLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------------- 211 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEE----EECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------------
T ss_pred EEEEEccCHHHHHhhcccccCCceeEE----EECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------------
Confidence 388999999876431 10 13567776 66632 222 578999999999999987311
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
....+++.+.++||.+.+..
T Consensus 212 -------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------CCHHHHHHHHHTTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 22578899999999988744
No 356
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.83 E-value=0.32 Score=47.10 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpG--CGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.| .|.|..+..+++ +|+.|.+++.+..-+..+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA 203 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3678999998 478888777765 699999999998776443
No 357
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=89.81 E-value=0.27 Score=48.17 Aligned_cols=39 Identities=23% Similarity=0.192 Sum_probs=31.3
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cC-CeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISH-LG-FISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~-~G-f~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+| .|.++..||+ +| ..|.+++.|..-+..+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~ 236 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 236 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence 67899999976 5888888877 48 6999999998776443
No 358
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.24 E-value=0.39 Score=46.10 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc--CCeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISHL--GFISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~~--Gf~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..||+. |..|.++|.|..-+..++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~ 213 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR 213 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 678999999876 8889999875 789999999998765443
No 359
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.24 E-value=0.98 Score=39.06 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=26.7
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHc-CCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHL-GFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~-Gf~v~G~D~S~~ML 206 (394)
.+.+|++.|+|. |+ ++..|.+. |+.|+++|.+..-+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~ 76 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA 76 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence 356899998763 32 24556677 99999999998665
No 360
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.98 E-value=0.24 Score=47.77 Aligned_cols=37 Identities=30% Similarity=0.265 Sum_probs=30.2
Q ss_pred CC--CeEEEecC--CCChhHHHHHH-cCC-eEEEEeCCHHHHH
Q 016155 171 SP--PACLVPGA--GLGRLALEISH-LGF-ISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~--~~VLvpGC--GlGRLa~eLA~-~Gf-~v~G~D~S~~ML~ 207 (394)
++ .+||+.|+ |.|.++..+++ +|+ .|.+++.+..-+.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~ 200 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 56 89999997 78888877765 699 9999999876553
No 361
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=88.92 E-value=0.65 Score=46.32 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=32.2
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+ |.|.++..+|+. |..|.+++-+..-+..+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 36789999996 678998888775 99999999888766443
No 362
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=88.82 E-value=1.1 Score=43.17 Aligned_cols=88 Identities=19% Similarity=0.314 Sum_probs=54.5
Q ss_pred ceeEEecccccccCCCCCCCCccEEEEe--cccCC------------hhhHHHHHHHHHHhccCCcEEE-EecCcchhhh
Q 016155 259 GFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------AHNIVEYIEIISRILKDGGVWI-NLGPLLYHFA 323 (394)
Q Consensus 259 ~ls~~~GDf~ely~~~~~~~~fD~VvT~--fFlDt------------a~ni~~yl~~I~~~LKpGG~wI-N~GPLlyh~~ 323 (394)
...++.||.+++... ...++||+|+|- |.... ...+.+.|+.++++|||||.++ +++.. | .
T Consensus 14 ~~~ii~gD~~~~l~~-l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~-~--~ 89 (323)
T 1boo_A 14 NGSMYIGDSLELLES-FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA-Y--M 89 (323)
T ss_dssp SEEEEESCHHHHGGG-SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC-E--E
T ss_pred CceEEeCcHHHHHhh-CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE-e--c
Confidence 367889998774321 235789999987 54431 1236678899999999999876 34422 1 0
Q ss_pred hccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 324 DLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 324 ~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
. + .+. .-.+....+..+++..||.+..
T Consensus 90 ~--g-~~~-~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 90 K--G-VPA-RSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp T--T-EEE-ECCHHHHHHHHHHHTTCCEEEE
T ss_pred C--C-Ccc-cccchHHHHHHHHHhCCCEEEE
Confidence 0 0 000 0012345677788899998775
No 363
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.79 E-value=0.56 Score=47.10 Aligned_cols=40 Identities=23% Similarity=0.097 Sum_probs=32.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s 209 (394)
+++.+||+.|+ |.|.++..+|+. |..|.+++-|..=+..+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~ 269 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC 269 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 36789999997 689999988874 99999999887665443
No 364
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.36 E-value=2.1 Score=37.50 Aligned_cols=33 Identities=18% Similarity=0.026 Sum_probs=24.3
Q ss_pred eEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 174 ACLVPGA--GLGR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 174 ~VLvpGC--GlGR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
+||+.|+ |+|+ ++..|+++|+.|.+++-+..-+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 6999996 3444 3566677899999999887543
No 365
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.26 E-value=1.7 Score=38.68 Aligned_cols=36 Identities=22% Similarity=0.088 Sum_probs=26.8
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGC--GlGR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+.|+ |+|+ ++..|+++|+.|.+++-+..-+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~ 58 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG 58 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 5679999997 4454 4667778899999999876543
No 366
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=88.25 E-value=1.4 Score=40.13 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=28.8
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG----lGR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+-|++ .|+ ++..|+++|+.|..++-+....
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE 46 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH
Confidence 46789999965 666 6889999999999998876443
No 367
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.99 E-value=0.38 Score=45.74 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=28.2
Q ss_pred eEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 016155 174 ACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 207 (394)
Q Consensus 174 ~VLvpGC--GlGRLa~eLA~-~Gf~v~G~D~S~~ML~ 207 (394)
+||+.|+ |.|.++..+|+ +|+.|.+++-+..-+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~ 188 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD 188 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 7999997 78999988886 5999999998865443
No 368
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=87.97 E-value=12 Score=40.19 Aligned_cols=39 Identities=10% Similarity=0.083 Sum_probs=32.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC------CeE-EEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAGLGRLALEISHLG------FIS-QGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~G------f~v-~G~D~S~~ML~~s 209 (394)
+..+|||+=||.|.|+.=|.+.| |+| .++|++..+..+-
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty 256 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSL 256 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHH
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHH
Confidence 55789999999999988888777 765 5999999887543
No 369
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.62 E-value=1.7 Score=38.29 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=21.2
Q ss_pred eEEEecCCCChhHH----HHHHcCCeEEEEeCCH
Q 016155 174 ACLVPGAGLGRLAL----EISHLGFISQGNEFSY 203 (394)
Q Consensus 174 ~VLvpGCGlGRLa~----eLA~~Gf~v~G~D~S~ 203 (394)
+||+.|+ +|.++. .|+++|+.|.+++-+.
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 6999994 455544 4556699999998775
No 370
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.36 E-value=1 Score=43.53 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=28.9
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~eLA~~-Gf~v~G~D~S~~ML 206 (394)
++.+||+.|+| .|.++..||+. |..|.+++-+..-+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~ 217 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKR 217 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHH
Confidence 56799999986 47777787764 99999999987654
No 371
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=87.03 E-value=0.52 Score=44.85 Aligned_cols=33 Identities=24% Similarity=0.353 Sum_probs=27.4
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHH
Q 016155 174 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMM 206 (394)
Q Consensus 174 ~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML 206 (394)
+||+.|+ |.|.++..+|+. |+.|.+++-+..-+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~ 188 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 188 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 7999997 789998888764 99999999886544
No 372
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=86.93 E-value=0.92 Score=43.78 Aligned_cols=138 Identities=11% Similarity=-0.024 Sum_probs=84.5
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhcccccccccccccccccc
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 232 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~s 232 (394)
..|+++.|... ++..+||.=+|+|.++.|+...|-.++.+|.+..-+..-+ +.
T Consensus 80 l~~yf~~l~~~-------n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~---~N----------------- 132 (283)
T 2oo3_A 80 FLEYISVIKQI-------NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLL---KL----------------- 132 (283)
T ss_dssp GHHHHHHHHHH-------SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHT---TS-----------------
T ss_pred HHHHHHHHHHh-------cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHH---HH-----------------
Confidence 45788888874 3446899999999999999998888999999997763211 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCChh----hHHHHHHHHHH--h
Q 016155 233 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTAH----NIVEYIEIISR--I 305 (394)
Q Consensus 233 n~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~~GDf~e-ly~~~~~~~~fD~VvT~fFlDta~----ni~~yl~~I~~--~ 305 (394)
.. ...++.++.+|... +.........||+| |||..- ...+.++.|.+ .
T Consensus 133 -l~--------------------~~~~~~V~~~D~~~~L~~l~~~~~~fdLV----fiDPPYe~k~~~~~vl~~L~~~~~ 187 (283)
T 2oo3_A 133 -PH--------------------FNKKVYVNHTDGVSKLNALLPPPEKRGLI----FIDPSYERKEEYKEIPYAIKNAYS 187 (283)
T ss_dssp -CC--------------------TTSCEEEECSCHHHHHHHHCSCTTSCEEE----EECCCCCSTTHHHHHHHHHHHHHH
T ss_pred -hC--------------------cCCcEEEEeCcHHHHHHHhcCCCCCccEE----EECCCCCCCcHHHHHHHHHHHhCc
Confidence 00 01235677778543 22100123569988 678742 34455666654 4
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 306 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 306 LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+.|+|+.+ +.|..-+. . ..+.+.+-+++.|.++...+
T Consensus 188 r~~~Gi~v----~WYPi~~~---------~-~~~~~~~~l~~~~~~~l~~e 224 (283)
T 2oo3_A 188 KFSTGLYC----VWYPVVNK---------A-WTEQFLRKMREISSKSVRIE 224 (283)
T ss_dssp HCTTSEEE----EEEEESSH---------H-HHHHHHHHHHHHCSSEEEEE
T ss_pred cCCCeEEE----EEEeccch---------H-HHHHHHHHHHhcCCCeEEEE
Confidence 66899998 44432211 0 23455556666676555533
No 373
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=86.58 E-value=0.83 Score=43.92 Aligned_cols=37 Identities=19% Similarity=0.266 Sum_probs=29.7
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMI 207 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~ 207 (394)
+++.+||+.|+ |.|.++..+|+. |+.|.++ .|..-+.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~ 188 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE 188 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence 46789999994 679998888765 9999999 7776554
No 374
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.58 E-value=0.45 Score=47.06 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eL----A~~Gf~v~G~D~S~~ML 206 (394)
.+.+|+++|+| +.+..+ +..|..|++.|.+..-+
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l 204 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKL 204 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 56799999984 444333 34599999999998665
No 375
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.46 E-value=0.79 Score=44.55 Aligned_cols=36 Identities=17% Similarity=0.066 Sum_probs=28.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf~v~G~D~S~~ML 206 (394)
++.+||+.|+|. |.++..+|+ +|+.|.+++-|..-+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~ 224 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKK 224 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 567999999763 677777765 499999999887654
No 376
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=86.37 E-value=1.1 Score=43.48 Aligned_cols=51 Identities=18% Similarity=-0.016 Sum_probs=40.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH---HHHHHHh
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSY---YMMICSS 210 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~Gf~v~G~D~S~---~ML~~s~ 210 (394)
+++.|-+.+.+ ++..||||=||.|..+.+..++|....|+|++. .+...+.
T Consensus 231 l~~~~i~~~~~----~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 231 VIERLVRALSH----PGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHHHHSC----TTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHHHHhCC----CCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHH
Confidence 55555554432 567999999999999999999999999999999 7765544
No 377
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.31 E-value=0.4 Score=40.73 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=26.2
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 174 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 174 ~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
.|+++|+|...| |..|+++|++|+-+|-+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 599999999998 77899999999999954
No 378
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=86.10 E-value=0.78 Score=44.32 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=26.7
Q ss_pred CeEEEecCC-CChhH-HHHH-H-cCCe-EEEEeCCHH
Q 016155 173 PACLVPGAG-LGRLA-LEIS-H-LGFI-SQGNEFSYY 204 (394)
Q Consensus 173 ~~VLvpGCG-lGRLa-~eLA-~-~Gf~-v~G~D~S~~ 204 (394)
.+||+.|+| .|.++ ..|| + +|.. |.+++-+..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 799999975 48888 8888 4 5997 999998875
No 379
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.87 E-value=4.4 Score=39.76 Aligned_cols=115 Identities=10% Similarity=0.041 Sum_probs=70.5
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGl-G-RLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
..+|.++|+|. | .++..|++.|+.|++.|.+..-+.... . . .+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~---~----~-----------------------g~~---- 67 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE---R----E-----------------------GIA---- 67 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH---T----T-----------------------TCB----
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH---H----C-----------------------CCE----
Confidence 46899999873 3 347778888999999999986543111 0 0 000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
...+..++.. .....|+|+.+.--+ .+.+.++.+...|+||-++|+.+-..+
T Consensus 68 -------------~~~s~~e~~~---~a~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiId~st~~~--------- 119 (358)
T 4e21_A 68 -------------GARSIEEFCA---KLVKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVIDGGNSHY--------- 119 (358)
T ss_dssp -------------CCSSHHHHHH---HSCSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEEECSSCCH---------
T ss_pred -------------EeCCHHHHHh---cCCCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEEeCCCCCh---------
Confidence 0012222211 113459998875433 466788899999999999998543322
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
-+..++.+.+.+.|...+.
T Consensus 120 ------~~~~~~~~~l~~~g~~~vd 138 (358)
T 4e21_A 120 ------QDDIRRADQMRAQGITYVD 138 (358)
T ss_dssp ------HHHHHHHHHHHTTTCEEEE
T ss_pred ------HHHHHHHHHHHHCCCEEEe
Confidence 1234455556667777665
No 380
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.60 E-value=0.55 Score=47.13 Aligned_cols=36 Identities=31% Similarity=0.461 Sum_probs=26.9
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eL-A~~Gf~v~G~D~S~~ML 206 (394)
++.+|+++|+|. |+.+..+ ..+|..|++.|.+..-+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l 220 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVA 220 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 567999999984 4444443 44599999999998654
No 381
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=85.30 E-value=2.5 Score=39.23 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=48.1
Q ss_pred eEEecccccccCCCCCCCCccEEEEe--cccCCh------------hhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhc
Q 016155 261 SMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTA------------HNIVEYIEIISRILKDGGVWIN-LGPLLYHFADL 325 (394)
Q Consensus 261 s~~~GDf~ely~~~~~~~~fD~VvT~--fFlDta------------~ni~~yl~~I~~~LKpGG~wIN-~GPLlyh~~~~ 325 (394)
.++.||.+++... ...++||+|+|- |..... .-+.+.++.++++|||||.++- .++ +
T Consensus 6 ~l~~gD~~~~l~~-l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d----~--- 77 (260)
T 1g60_A 6 KIHQMNCFDFLDQ-VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP----F--- 77 (260)
T ss_dssp SEEECCHHHHHHH-SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH----H---
T ss_pred eEEechHHHHHHh-ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc----H---
Confidence 5678887664321 124789999876 554311 1245677888999999998763 221 0
Q ss_pred cCCCCCccccCCHHHHHHHHHhCCCEEEEE
Q 016155 326 YGQEDEMSIELSLEDVKRVALHYGFEFEKE 355 (394)
Q Consensus 326 ~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e 355 (394)
....+..++...||.+..+
T Consensus 78 -----------~~~~~~~~~~~~gf~~~~~ 96 (260)
T 1g60_A 78 -----------NCAFICQYLVSKGMIFQNW 96 (260)
T ss_dssp -----------HHHHHHHHHHHTTCEEEEE
T ss_pred -----------HHHHHHHHHHhhccceeEE
Confidence 1234566778889987664
No 382
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=85.12 E-value=1.7 Score=42.34 Aligned_cols=227 Identities=13% Similarity=0.125 Sum_probs=122.1
Q ss_pred ccCCCCCCCccccchHHHhhhhcccccccCCCCC-------CCCCCCCCCcCCCCCCcchHHHHHHHHHHhhcCcccCh-
Q 016155 75 EYKTASCPGKLENREETNQSCSNDFTDSNGNASS-------PACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAEGK- 146 (394)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~kv~~~L~q~~RDWS~eg~- 146 (394)
.-.-.-++|+|-+|.-=+++++..+ |-|+-|. .+++|-.+.. ..-+.-=..+.+++.|-+.---.
T Consensus 37 F~eDka~S~e~aLn~ictr~~G~Dl--dSGlfS~p~v~l~y~~~HWdNspg-----~~myG~n~~v~~~l~~r~p~~~~~ 109 (320)
T 2hwk_A 37 FETDKAHSAEIVLNQLCVRFFGLDL--DSGLFSAPTVPLSIRNNHWDNSPS-----PNMYGLNKEVVRQLSRRYPQLPRA 109 (320)
T ss_dssp HHTTCCCCHHHHHHHHHHHHHSCCG--GGCTTBSSSEECEEETTEEECCSC-----SCEEBCCHHHHHHHHTTCTTHHHH
T ss_pred cccccccCHHHHHHHHHHHhhcccc--CcccccCCccceeeccccccCCCC-----ccccCcCHHHHHHHHHhCchhhhh
Confidence 3344567899999988888888666 5553311 1255654331 22223334566677666642100
Q ss_pred ---------hHHh-hchHHHHHHHHhhCCCCCCCCCCeEEEe---cCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHhhh
Q 016155 147 ---------TERD-QCYKPILEELDALFPNRSKESPPACLVP---GAGLGRLALEISHL-GFISQGNEFSYYMMICSSFI 212 (394)
Q Consensus 147 ---------~ER~-~~y~pIl~~L~~~~p~~~~~~~~~VLvp---GCGlGRLa~eLA~~-Gf~v~G~D~S~~ML~~s~fi 212 (394)
.++. +-|.|-. ..+|- +|.-...||+ .++.|+..+.+.+. |+.|.-+|. .|.+
T Consensus 110 ~~~g~~~~~~~~~~~~~~~~~----n~vP~--NRrlPH~Lv~~~~~~~~~~~~~~~~k~~g~~vl~v~~--~~~~----- 176 (320)
T 2hwk_A 110 VATGRVYDMNTGTLRNYDPRI----NLVPV--NRRLPHALVLHHNEHPQSDFSSFVSKLKGRTVLVVGE--KLSV----- 176 (320)
T ss_dssp HHHTCEECTTTSSEECCCTTS----CCSCT--TSCCSSCCCSCCCCCCCCCCHHHHHTSSCSEEEEEES--CCCC-----
T ss_pred cccCeEEeccCCccccCCccc----ceecc--ccCCCcchhhhhhccCCCCHHHHHhhCCCcEEEEEec--cccc-----
Confidence 0000 0111110 11121 2333455655 68899998888776 888877743 3321
Q ss_pred hhccccccccccccccccccCCCCcccCccccccCCCCCCCCCCCCceeEE-ecccccccCCCCCCCCccEEEEec----
Q 016155 213 LNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMC-GGDFVEVYSDPSQVGAWDAVVTCF---- 287 (394)
Q Consensus 213 ln~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p~~~~~~~~ls~~-~GDf~ely~~~~~~~~fD~VvT~f---- 287 (394)
..+.-. -|+| + .+..+. .+||.+- ...+.+|+|++-.
T Consensus 177 ---p~k~v~-wi~P-------------------i-----------~GAt~~~~lDfg~p----~~~~k~DvV~SDMApn~ 218 (320)
T 2hwk_A 177 ---PGKMVD-WLSD-------------------R-----------PEATFRARLDLGIP----GDVPKYDIIFVNVRTPY 218 (320)
T ss_dssp ---TTSEEE-EEES-------------------S-----------TTCSEECCGGGCSC----TTSCCEEEEEEECCCCC
T ss_pred ---CCceeE-eecc-------------------C-----------CCceeecccccCCc----cccCcCCEEEEcCCCCC
Confidence 111111 1111 0 123444 7787762 2347799999763
Q ss_pred ---c----cCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEeeccc
Q 016155 288 ---F----IDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIET 360 (394)
Q Consensus 288 ---F----lDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~~i~~ 360 (394)
- +|.+.-+.-.++-..++|||||.||- -.|++.|. ..++|...+.+. |+.++.-...+
T Consensus 219 sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~---KvyggaDr-----------~se~lv~~LaR~-F~~Vr~vKP~A 283 (320)
T 2hwk_A 219 KYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVS---IGYGYADR-----------ASESIIGAIARQ-FKFSRVCKPKS 283 (320)
T ss_dssp CSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEE---EECCCCSH-----------HHHHHHHHHHTT-EEEEEEECCTT
T ss_pred CCccccccchHHHHHHHHHHHHHHhcCCCceEEE---EEecCCcc-----------cHHHHHHHHHHh-cceeeeeCCCC
Confidence 1 44443333356666699999999996 24544432 347888888664 98887442221
Q ss_pred cCCCCcccccccccceEEEEEEEc
Q 016155 361 TYTTNPRSMMQNRYFTAFWTMRKK 384 (394)
Q Consensus 361 ~Y~~d~~sm~~~~Y~~~f~va~K~ 384 (394)
.=. =...|+|++.-
T Consensus 284 SR~----------StEvf~La~gf 297 (320)
T 2hwk_A 284 SLE----------ETEVLFVFIGY 297 (320)
T ss_dssp CCS----------TTCEEEEEEEE
T ss_pred ccc----------cceEEEEEEee
Confidence 111 24578888763
No 383
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=85.09 E-value=0.44 Score=58.18 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=26.8
Q ss_pred CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc-hhhhhccC-----CCCCccccCCHHHHHHHHHhCCC
Q 016155 277 VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL-YHFADLYG-----QEDEMSIELSLEDVKRVALHYGF 350 (394)
Q Consensus 277 ~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLl-yh~~~~~g-----~~~~~~ieLS~eEl~~ll~~~GF 350 (394)
...||+||....|...+++.+.+..+.++|||||++|-..+.. +.+....+ ..+ ..-.++.++..+++...||
T Consensus 1309 ~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~-~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1309 LGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQG-GRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp ---CCEEEEECC--------------------CCEEEEEEC---------------------------CTTTTSSTTTTE
T ss_pred CCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccccccccccccccccc-CCcccCHHHHHHHHHhCCC
Confidence 3579999988888877889999999999999999987532110 00000000 000 0112566666677888999
Q ss_pred EEEEE
Q 016155 351 EFEKE 355 (394)
Q Consensus 351 ~ii~e 355 (394)
..+..
T Consensus 1388 ~~~~~ 1392 (2512)
T 2vz8_A 1388 HLVAL 1392 (2512)
T ss_dssp EEEEE
T ss_pred ceeee
Confidence 87653
No 384
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.75 E-value=5.4 Score=38.21 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=29.4
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHHH
Q 016155 172 PPACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMMI 207 (394)
Q Consensus 172 ~~~VLvpGCGl--GRLa~eLA~~Gf--~v~G~D~S~~ML~ 207 (394)
..+|.++|+|. |.++..|++.|+ .|++.|.+..-+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~ 72 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESIS 72 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 36899999885 456788888999 9999999986653
No 385
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=84.54 E-value=0.43 Score=47.62 Aligned_cols=31 Identities=29% Similarity=0.276 Sum_probs=27.1
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
++|+|+|+|.+.| |+.||++|++|+-+|-+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 4799999999999 788999999999988654
No 386
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.52 E-value=0.97 Score=44.35 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=25.6
Q ss_pred CCCeEEEecCC-CChhH-HHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG-LGRLA-LEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa-~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+.+|++.|+| .|+.+ ..++..|..|++.|.+..-+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~ 202 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRL 202 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 45799999984 23332 33445699999999998655
No 387
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=84.49 E-value=1.4 Score=42.88 Aligned_cols=39 Identities=21% Similarity=0.299 Sum_probs=31.7
Q ss_pred CCCeEEEec--CCCChhHHHHHHc--CCeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPG--AGLGRLALEISHL--GFISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpG--CGlGRLa~eLA~~--Gf~v~G~D~S~~ML~~s 209 (394)
++.+||+.| .|.|.++..||+. |..|.+++-+..-+..+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~ 213 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 567899998 4569999999985 89999999998766433
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.32 E-value=1.7 Score=42.06 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=26.1
Q ss_pred CCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCH
Q 016155 172 PPACLVPGAG-LGRLALEISH-LGFISQGNEFSY 203 (394)
Q Consensus 172 ~~~VLvpGCG-lGRLa~eLA~-~Gf~v~G~D~S~ 203 (394)
+.+||+.|+| .|.++..+|+ +|+.|.+++.+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 6799999985 4777777765 599999999986
No 389
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=84.21 E-value=5.6 Score=37.20 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=28.3
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCG----lGR-La~eLA~~Gf~v~G~D~S~~M 205 (394)
++++||+-|++ .|+ ++..|+++|+.|..++.+..-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~ 69 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL 69 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 56789999965 554 688899999999999988643
No 390
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=84.08 E-value=8.6 Score=34.83 Aligned_cols=30 Identities=20% Similarity=0.099 Sum_probs=22.9
Q ss_pred CeEEEecCCCChhHHHH----HHcCCeEEEEeCCHH
Q 016155 173 PACLVPGAGLGRLALEI----SHLGFISQGNEFSYY 204 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eL----A~~Gf~v~G~D~S~~ 204 (394)
.+||+.|+ |.++..| .++|+.|.+++-+..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 58999995 7765554 556999999987753
No 391
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=83.96 E-value=1 Score=43.78 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=29.2
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMI 207 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~~ML~ 207 (394)
+++.+||+.|+ |.|.++..||+. |+.|.++- |..=+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~ 202 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD 202 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence 36789999998 489999999875 99998874 665443
No 392
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.70 E-value=4.4 Score=38.58 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
...+|.++|+|. |+ ++..|++.|+.|++.|.+..-+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 67 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARA 67 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 456899999984 43 5778888999999999998654
No 393
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.58 E-value=3.1 Score=42.97 Aligned_cols=36 Identities=17% Similarity=0.088 Sum_probs=25.2
Q ss_pred CCCeEEEecCCC-ChhHH-HHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GRLAL-EISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~-eLA~~Gf~v~G~D~S~~ML 206 (394)
.+.+|+++|+|. |+.+. .+...|..|.+.|.+..-+
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~ 310 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINA 310 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 678999999752 33322 2334599999999998654
No 394
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.57 E-value=0.78 Score=45.35 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=26.3
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA-~~Gf~v~G~D~S~~ML 206 (394)
.+.+|+++|+|. |+.+..++ .+|..|++.|.+..-+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 577999999874 44444444 4599999999987544
No 395
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.45 E-value=3.3 Score=39.02 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=27.9
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 016155 172 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 172 ~~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
..+|.++|+|. +.++..|++.|+.|++.|.+..-+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 43 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQAC 43 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 45899998874 335777888899999999998654
No 396
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=83.16 E-value=19 Score=33.91 Aligned_cols=163 Identities=12% Similarity=0.027 Sum_probs=86.6
Q ss_pred HHHHHHHHHHhhcCcccChhHHhhchH---------HHHH--HHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc----
Q 016155 128 DKVRCIIRNIVRDWAAEGKTERDQCYK---------PILE--ELDALFPNRSKESPPACLVPGAGLGRLALEISHL---- 192 (394)
Q Consensus 128 ~kv~~~L~q~~RDWS~eg~~ER~~~y~---------pIl~--~L~~~~p~~~~~~~~~VLvpGCGlGRLa~eLA~~---- 192 (394)
-.++.-|.+++++++. ..+|+...|. .++. +|-+.+-+ -+..|++.|+-.|.-+..+|..
T Consensus 20 ~~~~~~l~~~~~~~~~-~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~~----vpG~ivE~GV~rG~S~~~~a~~~~~l 94 (257)
T 3tos_A 20 TETTQRLTKLLTNSPI-PTEELVNNLPLFLRRHQMTDLLSMDALYRQVLD----VPGVIMEFGVRFGRHLGTFAALRGVY 94 (257)
T ss_dssp HHHHHHHHHHHHTCCS-CGGGGGGCGGGGCCHHHHHHHHHHHHHHHHTTT----SCSEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC-ChHHHHHhHHhhhhHHHHHHHHHHHHHHHHhhC----CCCeEEEEecccCHHHHHHHHHHHHh
Confidence 4467788889999985 3455544442 1221 23233221 4568999999999988887653
Q ss_pred -----CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCcccc--------ccCCCCCCCCCCCCc
Q 016155 193 -----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPV--------SIPDIHPASAGITEG 259 (394)
Q Consensus 193 -----Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v--------~iPDv~p~~~~~~~~ 259 (394)
.-.|.|.|-=.-|-... ......... ....++......+.++.+ .+|. ...+
T Consensus 95 ~~~~~~r~v~~fDTFeG~P~~~------~~D~~~~~~--~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~-------~~~~ 159 (257)
T 3tos_A 95 EPYNPLRRIVGFDTFTGFPDVN------DVDRVGPTA--YQGRFAVPGGYPAYLKEVLDAHECSDFFGH-------VTQR 159 (257)
T ss_dssp CTTCTTCCEEEEECSSCCCSCC------GGGTTSTTC--STTTTCCCTTHHHHHHHHHHHHHTTSTTTT-------SCCS
T ss_pred cccCCCCEEEEEECCCCCCCCc------ccccccccc--ccCcccccchhHHHHHHHHHHHhhhhhcCC-------CCCc
Confidence 25788888433221000 000000000 000011000000001100 1111 1356
Q ss_pred eeEEecccccccCC---CCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEE
Q 016155 260 FSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 260 ls~~~GDf~ely~~---~~~~~~fD~VvT~fFlDt--a~ni~~yl~~I~~~LKpGG~wIN 314 (394)
+.++.|+|.+.-.. ....++||+| |||. -.+...|++.++..|+|||++|-
T Consensus 160 i~li~G~~~dTL~~~l~~~~~~~~dlv----~ID~D~Y~~t~~~le~~~p~l~~GGvIv~ 215 (257)
T 3tos_A 160 SVLVEGDVRETVPRYLAENPQTVIALA----YFDLDLYEPTKAVLEAIRPYLTKGSIVAF 215 (257)
T ss_dssp EEEEESCHHHHHHHHHHHCTTCCEEEE----EECCCCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEEecHHHHHHHHHHhCCCCceEEE----EEcCcccchHHHHHHHHHHHhCCCcEEEE
Confidence 99999999875310 0123457766 5554 34677899999999999999993
No 397
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=82.89 E-value=4.7 Score=37.62 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=29.6
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHH
Q 016155 173 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMIC 208 (394)
Q Consensus 173 ~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML~~ 208 (394)
.+|.++|+|+ +.+|..|+..|+.|+..|.+..-+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 42 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDA 42 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 5899999886 34577888899999999999987643
No 398
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=82.87 E-value=17 Score=42.07 Aligned_cols=40 Identities=15% Similarity=-0.059 Sum_probs=34.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-e-EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHLGF-I-SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~Gf-~-v~G~D~S~~ML~~s~ 210 (394)
...+|||+=||.|.+..-|.+.|+ . |.++|+....+.+.+
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~ 891 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFR 891 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHH
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHH
Confidence 567899999999999999999998 4 679999998875433
No 399
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=82.83 E-value=13 Score=34.21 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=25.6
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGC--GlGR-La~eLA~~Gf~v~G~D~S~~M 205 (394)
++.+||+-|+ ++|+ ++..|+++|+.|.+++-+..-
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 47 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK 47 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 5678999997 2333 355667789999999987643
No 400
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.79 E-value=10 Score=38.34 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=31.8
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHH
Q 016155 171 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMIC 208 (394)
Q Consensus 171 ~~~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML~~ 208 (394)
.-.+|.++|+|+ +.+|..|+..|+.|+..|.+..-+..
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~ 75 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDA 75 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 345899999997 45788999999999999999977643
No 401
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.62 E-value=1.1 Score=45.34 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=27.3
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eL-A~~Gf~v~G~D~S~~ML~ 207 (394)
.+.+|+++|+|. |..+..+ ..+|..|++.|.+..-+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~ 227 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKE 227 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 568999999984 4444443 445999999999986553
No 402
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=82.60 E-value=0.79 Score=44.57 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=28.0
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHH
Q 016155 170 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMM 206 (394)
Q Consensus 170 ~~~~~VLvpG--CGlGRLa~eLA~~-Gf~v~G~D~S~~ML 206 (394)
+++.+||+.| .|.|.++..+|+. |..|.+.+ +..-+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~ 220 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS 220 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH
Confidence 3678999999 4679998888764 99999988 54433
No 403
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.49 E-value=0.68 Score=46.31 Aligned_cols=36 Identities=28% Similarity=0.385 Sum_probs=27.0
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA-~~Gf~v~G~D~S~~ML 206 (394)
.+.+|+++|+|. |+.+..++ .+|..|++.|.+..-+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~ 208 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVK 208 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 467999999874 54455554 4599999999998655
No 404
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.12 E-value=5.1 Score=34.64 Aligned_cols=32 Identities=16% Similarity=-0.027 Sum_probs=24.2
Q ss_pred eEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 016155 174 ACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 205 (394)
Q Consensus 174 ~VLvpGC--GlGR-La~eLA~~Gf~v~G~D~S~~M 205 (394)
+||+.|+ |+|+ ++..|+++|+.|.+++-+..-
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 36 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK 36 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh
Confidence 6999995 3454 466677889999999887644
No 405
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=81.74 E-value=14 Score=35.04 Aligned_cols=112 Identities=12% Similarity=0.076 Sum_probs=62.6
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCC
Q 016155 173 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 250 (394)
Q Consensus 173 ~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~ 250 (394)
.||=++|.|. ..+|..|++.||.|++.|.+..-.. . + ..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~-------~------l-------------------~~------- 46 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAE-------P------L-------------------TK------- 46 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------C-------T------T-------------------TT-------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHH-------H------H-------------------HH-------
Confidence 3788887775 3346677888999999998874420 0 0 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHH-HHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 016155 251 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE-YIEIISRILKDGGVWINLGPLLYHFADLYGQE 329 (394)
Q Consensus 251 p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~-yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~ 329 (394)
.+.. .+.+..++- ..-|+|++|.- +...+.+ +...+...+++|+++|+.+...+
T Consensus 47 -------~G~~-~~~s~~e~~------~~~dvvi~~l~--~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p--------- 101 (297)
T 4gbj_A 47 -------LGAT-VVENAIDAI------TPGGIVFSVLA--DDAAVEELFSMELVEKLGKDGVHVSMSTISP--------- 101 (297)
T ss_dssp -------TTCE-ECSSGGGGC------CTTCEEEECCS--SHHHHHHHSCHHHHHHHCTTCEEEECSCCCH---------
T ss_pred -------cCCe-EeCCHHHHH------hcCCceeeecc--chhhHHHHHHHHHHhhcCCCeEEEECCCCCh---------
Confidence 0011 112323332 34588887643 3333333 34668889999999997543211
Q ss_pred CCccccCCHHHHHHHHHhCCCEEEE
Q 016155 330 DEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 330 ~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
-+..++.+.+.+.|...+.
T Consensus 102 ------~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 102 ------ETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp ------HHHHHHHHHHHHTTCEEEE
T ss_pred ------HHHHHHHHHHHhcCCceec
Confidence 1345666777788888776
No 406
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=80.85 E-value=12 Score=34.20 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
++..||+-|++.| .++..|+++|+.|.+++-+..-+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~ 49 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG 49 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4668999997644 35777888899999999987654
No 407
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=80.66 E-value=2.3 Score=41.59 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=23.9
Q ss_pred CccEEEEecccCC-hhhHHHHHHHHHHhccCCcEEEEec
Q 016155 279 AWDAVVTCFFIDT-AHNIVEYIEIISRILKDGGVWINLG 316 (394)
Q Consensus 279 ~fD~VvT~fFlDt-a~ni~~yl~~I~~~LKpGG~wIN~G 316 (394)
.-|+|+.+.-+.. ..+++. +.+...||||+++||.+
T Consensus 219 ~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~a 255 (335)
T 2g76_A 219 LCDFITVHTPLLPSTTGLLN--DNTFAQCKKGVRVVNCA 255 (335)
T ss_dssp GCSEEEECCCCCTTTTTSBC--HHHHTTSCTTEEEEECS
T ss_pred cCCEEEEecCCCHHHHHhhC--HHHHhhCCCCcEEEECC
Confidence 4588887765542 222221 45678899999999964
No 408
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=79.87 E-value=5.3 Score=41.93 Aligned_cols=133 Identities=20% Similarity=0.166 Sum_probs=0.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHcC--------------CeEEEEeC---CHHHHHHHhhhhhcccccccccc--------
Q 016155 170 ESPPACLVPGAGLGRLALEISHLG--------------FISQGNEF---SYYMMICSSFILNHTETAGEWNI-------- 224 (394)
Q Consensus 170 ~~~~~VLvpGCGlGRLa~eLA~~G--------------f~v~G~D~---S~~ML~~s~filn~~~~~~~~~i-------- 224 (394)
++..+||+.|-|||-.++...+.- -+.+++|. +..-|..+- ..+--
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~---------~~~~~~~~~~~~l 135 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAH---------QHWPELAPWAEQL 135 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH---------TTCGGGHHHHHHH
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHH---------HhChhhHHHHHHH
Q ss_pred ---ccccccccCCCCccc-CccccccCCCCCCCCCCCCceeEEecccccccCCCCC----CCCccEEEEecc-------c
Q 016155 225 ---YPWIHSNCNSLSDSD-QLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQ----VGAWDAVVTCFF-------I 289 (394)
Q Consensus 225 ---~Pfi~~~sn~~~~~~-qlr~v~iPDv~p~~~~~~~~ls~~~GDf~ely~~~~~----~~~fD~VvT~fF-------l 289 (394)
||-...-++....++ +++ +.+..||+.+... .- ...||+|+-==| +
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~-----------------l~l~~gd~~~~l~--~~~~~~~~~~d~~~~D~f~p~~np~~ 196 (676)
T 3ps9_A 136 QAQWPMPLPGCHRLLLDAGRVT-----------------LDLWFGDINELTS--QLDDSLNQKVDAWFLDGFAPAKNPDM 196 (676)
T ss_dssp HHHCCCCCSEEEEEEEGGGTEE-----------------EEEEESCHHHHGG--GBCGGGTTCEEEEEECCSCGGGCGGG
T ss_pred HHhCcccCCCceEEEecCCcEE-----------------EEEecCCHHHHHH--hcccccCCcccEEEECCCCCcCChhh
Q ss_pred CChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 290 DTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 290 Dta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
.+. ++|..+++++||||.+. ..-....+++.+.++||.+.+
T Consensus 197 w~~----~~~~~l~~~~~~g~~~~--------------------t~~~~~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 197 WTQ----NLFNAMARLARPGGTLA--------------------TFTSAGFVRRGLQDAGFTMQK 237 (676)
T ss_dssp SCH----HHHHHHHHHEEEEEEEE--------------------ESCCCHHHHHHHHHHTCEEEE
T ss_pred hhH----HHHHHHHHHhCCCCEEE--------------------eccCcHHHHHHHHhCCeEEEe
No 409
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=79.72 E-value=5.9 Score=36.24 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=25.9
Q ss_pred CCCeEEEecCCC--Ch-hHHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGL--GR-LALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGl--GR-La~eLA~~Gf~v~G~D~S 202 (394)
++++||+-|++. |+ ++..|+++|+.|..+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 567899999854 43 578889999999999876
No 410
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=79.60 E-value=1.6 Score=42.60 Aligned_cols=36 Identities=22% Similarity=0.270 Sum_probs=26.2
Q ss_pred CCCeEEEecCC-CChhHHH-HHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG-LGRLALE-ISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG-lGRLa~e-LA~~Gf~v~G~D~S~~ML 206 (394)
++.+||++|+| .|+.+.. ++.+|..|++.|.+..-+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~ 203 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERL 203 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 34799999985 3444433 445699999999998655
No 411
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=79.49 E-value=1.8 Score=41.74 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHH
Q 016155 171 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYY 204 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA----~~Gf~v~G~D~S~~ 204 (394)
.+.+|.++|+ |+++..+| ..|++|.+.|-+..
T Consensus 141 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 141 AGKTIGIVGF--GRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp TTCEEEEESC--SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 5678999965 66665555 45999999998764
No 412
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.34 E-value=6 Score=38.21 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=51.8
Q ss_pred eeEE-ecccccccCCCCCCCCccEEEEe--cccC------C---hhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhcc
Q 016155 260 FSMC-GGDFVEVYSDPSQVGAWDAVVTC--FFID------T---AHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLY 326 (394)
Q Consensus 260 ls~~-~GDf~ely~~~~~~~~fD~VvT~--fFlD------t---a~ni~~yl~~I~~~LKpGG~wIN-~GPLlyh~~~~~ 326 (394)
..++ .||.+++... -..++||+|+|- |... . ..-+...|..++++|||||.++- .+.. +.
T Consensus 39 ~~l~i~gD~l~~L~~-l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~---~~--- 111 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK-LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ---YQ--- 111 (319)
T ss_dssp EEEEEECCHHHHHHT-SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC---CC---
T ss_pred ceEEECCcHHHHHHh-CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc---cc---
Confidence 4567 8998774321 135789999976 4432 1 11356778889999999998874 2211 10
Q ss_pred CCCCCccccCCHHHHHHHHHhCC-CEEEEE
Q 016155 327 GQEDEMSIELSLEDVKRVALHYG-FEFEKE 355 (394)
Q Consensus 327 g~~~~~~ieLS~eEl~~ll~~~G-F~ii~e 355 (394)
+ + ........+..++...| |.+..+
T Consensus 112 ~--~--~~~~~l~~l~~~i~~~G~~~~~~~ 137 (319)
T 1eg2_A 112 G--E--AGSGDLISIISHMRQNSKMLLANL 137 (319)
T ss_dssp C--C--TTBCCHHHHHHHHHHHCCCEEEEE
T ss_pred c--c--cccccHHHHHHHHhCcccceeEEE
Confidence 0 0 01123456667777778 988764
No 413
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=79.22 E-value=23 Score=31.54 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~ 46 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA 46 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 5678999997654 35788888899999999988765
No 414
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.06 E-value=8.3 Score=35.32 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=26.6
Q ss_pred eEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 016155 174 ACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 174 ~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
+|.++|+|. +.++..|++.|++|++.|.+..-+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~ 36 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTC 36 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 689999885 345677888899999999998654
No 415
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.82 E-value=7.2 Score=35.51 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=20.9
Q ss_pred CCeEEEecCCCChhHHHH----HHcCCeEEEEeCC
Q 016155 172 PPACLVPGAGLGRLALEI----SHLGFISQGNEFS 202 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eL----A~~Gf~v~G~D~S 202 (394)
..+||+.|+ |.++..| +++|+.|.+++-+
T Consensus 3 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGC--GDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999994 6665554 5569999988654
No 416
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=78.41 E-value=1.8 Score=41.07 Aligned_cols=34 Identities=18% Similarity=0.309 Sum_probs=26.7
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCH
Q 016155 170 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSY 203 (394)
Q Consensus 170 ~~~~~VLvpG--CGlGRLa~eLA~~-Gf~v~G~D~S~ 203 (394)
+++.+||+.| .|.|.++..+|+. |..|.+++-+.
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~ 187 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR 187 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc
Confidence 3678999996 4579999888875 99999987433
No 417
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=78.14 E-value=8 Score=32.83 Aligned_cols=56 Identities=16% Similarity=0.164 Sum_probs=38.1
Q ss_pred CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEEEe
Q 016155 278 GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 278 ~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~e~ 356 (394)
+..|+|+.+-- ++.+.+.++.+.+ +..+++||..| .+ .+++.+++++.|..++-..
T Consensus 69 ~~~Dlvii~vp---~~~v~~v~~~~~~-~g~~~i~i~~~----------------~~---~~~l~~~a~~~Gi~~igpn 124 (145)
T 2duw_A 69 EKVDMVDVFRN---SEAAWGVAQEAIA-IGAKTLWLQLG----------------VI---NEQAAVLAREAGLSVVMDR 124 (145)
T ss_dssp SCCSEEECCSC---STHHHHHHHHHHH-HTCCEEECCTT----------------CC---CHHHHHHHHTTTCEEECSC
T ss_pred CCCCEEEEEeC---HHHHHHHHHHHHH-cCCCEEEEcCC----------------hH---HHHHHHHHHHcCCEEEcCC
Confidence 35688877532 3456677777666 67788887411 11 5789999999999888543
No 418
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=78.05 E-value=4.6 Score=38.33 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=29.4
Q ss_pred CCCeEEEecCCCC-hhHHHHHH-c-CCeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAGLG-RLALEISH-L-GFISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCGlG-RLa~eLA~-~-Gf~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+|.+ .++..+|+ + |..|.++|.|..=+..+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~ 204 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA 204 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhh
Confidence 6789999999864 55666665 3 78999999998765433
No 419
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=78.05 E-value=15 Score=33.76 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=26.2
Q ss_pred eEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHH
Q 016155 174 ACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMM 206 (394)
Q Consensus 174 ~VLvpGCGl--GRLa~eLA~~Gf--~v~G~D~S~~ML 206 (394)
+|.++|+|. +.++..|++.|+ +|.+.|.+..-+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~ 39 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESI 39 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHH
Confidence 799999875 345677788899 999999998665
No 420
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=77.63 E-value=11 Score=36.90 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=60.0
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCC
Q 016155 172 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 249 (394)
Q Consensus 172 ~~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv 249 (394)
..+|.++|+|. +.+|.-|++.|++|+..+.+..-+...+ .. ... ...+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~----~~---~~~--------------------~~~l~g~ 81 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQ----AE---GVN--------------------NRYLPNY 81 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHH----HH---SSB--------------------TTTBTTC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----Hc---CCC--------------------cccCCCC
Confidence 45899999996 4568889999999999999876543211 10 000 0112222
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 016155 250 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 314 (394)
Q Consensus 250 ~p~~~~~~~~ls~~~GDf~ely~~~~~~~~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN 314 (394)
. ...++.+. .|..+.- ...|+|+.+- ....+.+.++.|...|+|+-++|.
T Consensus 82 ~-----l~~~i~~t-~d~~ea~------~~aDvVilaV---p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 82 P-----FPETLKAY-CDLKASL------EGVTDILIVV---PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp C-----CCTTEEEE-SCHHHHH------TTCCEEEECC---CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred c-----cCCCeEEE-CCHHHHH------hcCCEEEECC---CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 01123322 2333321 3468887553 233567788888888999888885
No 421
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=77.61 E-value=20 Score=34.09 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=25.5
Q ss_pred CeEEEecCCC-C-hhHHHHHHcC-CeEEEEeCCH
Q 016155 173 PACLVPGAGL-G-RLALEISHLG-FISQGNEFSY 203 (394)
Q Consensus 173 ~~VLvpGCGl-G-RLa~eLA~~G-f~v~G~D~S~ 203 (394)
.+|.++|+|. | .++..|++.| +.|++.|.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4799999884 3 3577788889 9999999986
No 422
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=77.21 E-value=2.5 Score=40.20 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=29.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCe-EEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISHL-GFI-SQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~~-Gf~-v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..+|+. |.. +.++|.+..=+..++
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~ 202 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK 202 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH
Confidence 678999999874 5566666654 776 579999987664433
No 423
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=77.07 E-value=3.8 Score=40.65 Aligned_cols=40 Identities=10% Similarity=-0.110 Sum_probs=35.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~-G--f~v~G~D~S~~ML~~s~ 210 (394)
++..+||-.||.|..+..|+++ | -.|.|+|.+..|+..++
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 6779999999999999999886 3 47999999999998764
No 424
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.95 E-value=12 Score=38.30 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=30.3
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHH
Q 016155 171 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYY 204 (394)
Q Consensus 171 ~~~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ 204 (394)
+-.+|-++|+|+ +.+|.-|++.|+.|+..|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 446899999997 6789999999999999999987
No 425
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=76.79 E-value=2.6 Score=41.97 Aligned_cols=49 Identities=24% Similarity=0.282 Sum_probs=36.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 153 YKPILEELDALFPNRSKESPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 153 y~pIl~~L~~~~p~~~~~~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
|..+++.+..-++.. ....+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 16 ~~~~~~~~~~~~~~~--~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 16 YEEFLEIARNGLKAT--SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp HHHHHHHHHHCSCCC--SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred HHHHHHHhccCCCCC--CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 445666665544422 2467899999999988 678899999999998653
No 426
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=76.69 E-value=4.8 Score=37.83 Aligned_cols=35 Identities=14% Similarity=-0.027 Sum_probs=27.7
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 172 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 172 ~~~VLvpGCGl-G-RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
..+|.++|+|. | .++..|++.|+.|++.|.+..-+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 35799999885 3 36778888999999999987543
No 427
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=76.49 E-value=4.2 Score=42.03 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=24.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~~M 205 (394)
.+.+|.++| +|+.+..+|++ |..|++.|.+..-
T Consensus 276 ~GktVgIIG--~G~IG~~vA~~l~~~G~~V~v~d~~~~~ 312 (494)
T 3d64_A 276 AGKIAVVAG--YGDVGKGCAQSLRGLGATVWVTEIDPIC 312 (494)
T ss_dssp TTCEEEEEC--CSHHHHHHHHHHHTTTCEEEEECSCHHH
T ss_pred CCCEEEEEc--cCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 577899997 55666555544 8999999998754
No 428
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=76.39 E-value=2.8 Score=40.19 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=23.4
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHH
Q 016155 171 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYY 204 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA----~~Gf~v~G~D~S~~ 204 (394)
.+.+|.++|. |+++..+| ..|+.|.+.|-+..
T Consensus 141 ~g~~vgIiG~--G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 141 EGKTIGIIGF--GRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCceEEEEcc--CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 5678999965 56655555 45999999998753
No 429
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=75.94 E-value=2.4 Score=35.70 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=26.2
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~~M 205 (394)
.+.+||++|+|. |+ ++..|...|+.|+++|.+..-
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 567999999864 33 345666779999999988643
No 430
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=75.81 E-value=1.8 Score=41.17 Aligned_cols=29 Identities=24% Similarity=0.181 Sum_probs=25.4
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeC
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEF 201 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~ 201 (394)
.+||++|+|.+.| |..|+++|++|+-+|-
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 4899999999998 6778999999998874
No 431
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=75.50 E-value=0.63 Score=50.64 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=28.4
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSY 203 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~-Gf~v~G~D~S~ 203 (394)
+++.+||+.|+ |.|.++..||+. |..|.+.+-+.
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 47889999994 789999999886 99999887544
No 432
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.40 E-value=3.3 Score=33.93 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=26.9
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 172 PPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 172 ~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
..+|++.|+|. |+ ++..|++.|+.|.++|.+..-+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~ 42 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI 42 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 45899999864 22 4566677799999999998765
No 433
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=75.37 E-value=10 Score=36.44 Aligned_cols=143 Identities=10% Similarity=-0.003 Sum_probs=82.9
Q ss_pred CeEEEecCCCChhHHHHHH-cCCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCCCCC
Q 016155 173 PACLVPGAGLGRLALEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 251 (394)
Q Consensus 173 ~~VLvpGCGlGRLa~eLA~-~Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPDv~p 251 (394)
..||++|||+=..++.|.. .+..+.-+|+ +.++...+.+|.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~--------------------------------- 149 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGV--------------------------------- 149 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------------------
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCC---------------------------------
Confidence 4799999999999999983 4678888885 6666655555532100
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCcc----EEEEe----cccCChhhHHHHHHHHHHhccCCcEEEE--ecCcc--
Q 016155 252 ASAGITEGFSMCGGDFVEVYSDPSQVGAWD----AVVTC----FFIDTAHNIVEYIEIISRILKDGGVWIN--LGPLL-- 319 (394)
Q Consensus 252 ~~~~~~~~ls~~~GDf~ely~~~~~~~~fD----~VvT~----fFlDta~ni~~yl~~I~~~LKpGG~wIN--~GPLl-- 319 (394)
....+..++.+|+++-....-....|| +++.+ .||... .+...|+.|...+.||+.++- +.|-.
T Consensus 150 ---~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~-~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~ 225 (310)
T 2uyo_A 150 ---TPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLPAT-AQDGLFTEIGGLSAVGSRIAVETSPLHGDE 225 (310)
T ss_dssp ---CCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEEEECSCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEECCCTTCSH
T ss_pred ---CCCCCeEEEecchHhhHHHHHHhccCCCCCCEEEEEechHhhCCHH-HHHHHHHHHHHhCCCCeEEEEEecCCCCcc
Confidence 011235677777765100000011122 22221 467764 678899999999999987763 22211
Q ss_pred ----------hhhhhccCC---CCCccccC--C-HHHHHHHHHhCCCEEEE
Q 016155 320 ----------YHFADLYGQ---EDEMSIEL--S-LEDVKRVALHYGFEFEK 354 (394)
Q Consensus 320 ----------yh~~~~~g~---~~~~~ieL--S-~eEl~~ll~~~GF~ii~ 354 (394)
-++.. .|. -+...+.. + .+++.+.+.+.||+.+.
T Consensus 226 ~~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~~~~~~~f~~~G~~~~~ 275 (310)
T 2uyo_A 226 WREQMQLRFRRVSDA-LGFEQAVDVQELIYHDENRAVVADWLNRHGWRATA 275 (310)
T ss_dssp HHHHHHHHHHHHHC------------CCTTCCTTCCCHHHHHTTTTEEEEE
T ss_pred hhHHHHHHHHHHHHH-cCCcCCCCccccccCCCChHHHHHHHHHCcCcccc
Confidence 11111 110 01012333 6 88999999999999884
No 434
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=75.29 E-value=8.2 Score=34.06 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=22.8
Q ss_pred CCeEEEecC--CCChh-HHHHHHcCC--eEEEEeCCH
Q 016155 172 PPACLVPGA--GLGRL-ALEISHLGF--ISQGNEFSY 203 (394)
Q Consensus 172 ~~~VLvpGC--GlGRL-a~eLA~~Gf--~v~G~D~S~ 203 (394)
+.+||+.|+ |+|+. +..|+++|+ .|.+++-+.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 458999995 34443 556777899 999887653
No 435
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=75.19 E-value=14 Score=34.72 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eL----A~~Gf~v~G~D~S~~M 205 (394)
.+.+|+++|+| +.+..+ ...|.+|.+.|-+..-
T Consensus 154 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 154 HGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 57799999975 554444 4459999999998754
No 436
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=75.13 E-value=4.6 Score=41.59 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~----~Gf~v~G~D~S~~M 205 (394)
.+.+|+++| +|+.+..+|+ .|+.|++.|.+..-
T Consensus 256 ~GktVgIIG--~G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 256 SGKIVVICG--YGDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp TTSEEEEEC--CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CCCEEEEEe--eCHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 577899997 5565555544 49999999999754
No 437
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=75.01 E-value=2.2 Score=43.49 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=25.6
Q ss_pred CCCeEEEecCCC-Chh-HHHHHHcCCeEEEEeCCHHH
Q 016155 171 SPPACLVPGAGL-GRL-ALEISHLGFISQGNEFSYYM 205 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRL-a~eLA~~Gf~v~G~D~S~~M 205 (394)
.+.+|+++|+|. |+. +..+...|..|.+.|.+..-
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~r 255 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPIC 255 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 678999999985 443 33334459999999998753
No 438
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=74.47 E-value=2.9 Score=41.45 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=22.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~ 203 (394)
.+.+|.++|. |+++..+|++ |+.|.+.|-+.
T Consensus 175 ~gktvGIIGl--G~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 175 AGSEIGIVGF--GDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp SSSEEEEECC--SHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred CCCEEEEecC--CcccHHHHHhhhhCCCEEEEECCCC
Confidence 5678999975 5666665554 88999998764
No 439
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=74.11 E-value=32 Score=32.01 Aligned_cols=36 Identities=19% Similarity=0.159 Sum_probs=29.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+..||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~ 68 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPAL 68 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4678999998654 35788888999999999988665
No 440
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=73.95 E-value=14 Score=34.70 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.1
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eL----A~~Gf~v~G~D~S~~ML 206 (394)
.+.+|+++|+| +.+..+ ...|+.|++.|-+..-+
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~~ 193 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAHL 193 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 57799999975 554444 45599999999987543
No 441
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=73.89 E-value=2 Score=41.60 Aligned_cols=30 Identities=37% Similarity=0.337 Sum_probs=27.0
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 174 ACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 174 ~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 699999999999 789999999999999753
No 442
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=73.42 E-value=10 Score=39.18 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=26.7
Q ss_pred CCCeEEEecCC-CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAG-LGR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCG-lGR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+.+|++.|+| .|+ .|..|+..|..|..+|.+..-+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a 301 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICA 301 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 57899999987 222 2555566799999999997544
No 443
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=72.55 E-value=2.2 Score=41.45 Aligned_cols=29 Identities=34% Similarity=0.297 Sum_probs=26.4
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 174 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 174 ~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 699999999998 68899999999999965
No 444
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=72.28 E-value=16 Score=33.18 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=26.9
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCe-EEEEeCCHHHH
Q 016155 172 PPACLVPGAGL-GR-LALEISHLGFI-SQGNEFSYYMM 206 (394)
Q Consensus 172 ~~~VLvpGCGl-GR-La~eLA~~Gf~-v~G~D~S~~ML 206 (394)
+.+|.++|+|. |+ ++..|++.|+. |...|-+..-+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~ 47 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESA 47 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHH
Confidence 35799999973 33 46777788999 89999987654
No 445
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=72.04 E-value=15 Score=36.53 Aligned_cols=34 Identities=21% Similarity=0.017 Sum_probs=27.8
Q ss_pred eEEEecCCCC--hhHHHHHHcCCeEEEEeCCHHHHH
Q 016155 174 ACLVPGAGLG--RLALEISHLGFISQGNEFSYYMMI 207 (394)
Q Consensus 174 ~VLvpGCGlG--RLa~eLA~~Gf~v~G~D~S~~ML~ 207 (394)
+|.++|+|.= .+|..|++.|++|+++|.+..-+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~ 37 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKID 37 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 6889998863 347788999999999999987653
No 446
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=72.00 E-value=2.5 Score=40.84 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
+..+|+++|+|.+.| |+.|+++|++|+-+|-..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 457999999999987 678899999999999654
No 447
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=71.97 E-value=14 Score=37.25 Aligned_cols=35 Identities=17% Similarity=-0.000 Sum_probs=28.1
Q ss_pred CeEEEecCCCC--hhHHHHHHcCCeEEEEeCCHHHHH
Q 016155 173 PACLVPGAGLG--RLALEISHLGFISQGNEFSYYMMI 207 (394)
Q Consensus 173 ~~VLvpGCGlG--RLa~eLA~~Gf~v~G~D~S~~ML~ 207 (394)
.+|.++|+|.= .+|..|++.|+.|++.|.+..-+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~ 39 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIE 39 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence 47999998752 347778899999999999987653
No 448
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=71.75 E-value=3.3 Score=40.25 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=23.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~~----Gf~v~G~D~S~ 203 (394)
.+.+|.++|. |+++..+|++ |+.|.+.|-+.
T Consensus 144 ~g~tvGIIG~--G~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 144 DNATVGFLGM--GAIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp TTCEEEEECC--SHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5679999975 5666666554 88999999875
No 449
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=71.65 E-value=10 Score=35.02 Aligned_cols=40 Identities=13% Similarity=-0.045 Sum_probs=25.3
Q ss_pred hhCCCCCCCCCCeEEEecCCCCh--hHHHHHHcCCeEEEEeC
Q 016155 162 ALFPNRSKESPPACLVPGAGLGR--LALEISHLGFISQGNEF 201 (394)
Q Consensus 162 ~~~p~~~~~~~~~VLvpGCGlGR--La~eLA~~Gf~v~G~D~ 201 (394)
.+||-.-.-.+.+||++|+|.=. -+..|.+.|..|+-++-
T Consensus 21 ~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 21 HMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp -CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CccccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 34552222367899999987422 24456777999887754
No 450
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.61 E-value=4.7 Score=33.40 Aligned_cols=37 Identities=19% Similarity=-0.010 Sum_probs=28.3
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 207 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~~ML~ 207 (394)
-..+|++.|+|. |+ ++..|...|+.|+++|.+..-+.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~ 44 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVD 44 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 356899999864 33 35666777999999999997653
No 451
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.34 E-value=54 Score=28.93 Aligned_cols=36 Identities=25% Similarity=0.264 Sum_probs=28.5
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+-|++.| .++..|+++|+.|..++-+..-+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~ 42 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASA 42 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997544 35788888999999999988665
No 452
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=70.63 E-value=2.1 Score=41.08 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=26.9
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc--CCeEEEEeCCHH
Q 016155 170 ESPPACLVPGA--GLGRLALEISHL--GFISQGNEFSYY 204 (394)
Q Consensus 170 ~~~~~VLvpGC--GlGRLa~eLA~~--Gf~v~G~D~S~~ 204 (394)
+++.+||+.|+ |.|.++..||+. |..|.+.+ |..
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~ 178 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STF 178 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHH
Confidence 36789999998 578999999875 47888887 443
No 453
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=70.59 E-value=28 Score=33.77 Aligned_cols=33 Identities=15% Similarity=-0.035 Sum_probs=23.9
Q ss_pred CCCeEEEecCCCChhH----HHHHHcCCeEEEEeCCHH
Q 016155 171 SPPACLVPGAGLGRLA----LEISHLGFISQGNEFSYY 204 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa----~eLA~~Gf~v~G~D~S~~ 204 (394)
...+||+.|+ +|.++ ..|++.|+.|.+++-+..
T Consensus 68 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 68 PLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 4568999995 35554 445566999999987765
No 454
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=70.58 E-value=2.3 Score=39.93 Aligned_cols=29 Identities=28% Similarity=0.218 Sum_probs=25.6
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 174 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 174 ~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
-|+++|+|...+ |..||++|++|+-+|-.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 499999999987 78889999999999853
No 455
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=70.38 E-value=13 Score=33.87 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=25.5
Q ss_pred eEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 174 ACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 174 ~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
+|.++|+|. |+ ++..|++ |++|+..|.+..-+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~ 36 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKA 36 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHH
Confidence 689999985 44 4777888 99999999987654
No 456
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=70.34 E-value=9.2 Score=35.42 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=27.7
Q ss_pred CeEEEecC-CC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 173 PACLVPGA-GL-G-RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 173 ~~VLvpGC-Gl-G-RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+|.++|+ |. | .++..|++.|++|++.|-+..-+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~ 48 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR 48 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 48999999 84 3 45778888999999999987654
No 457
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=70.31 E-value=4.2 Score=39.20 Aligned_cols=31 Identities=6% Similarity=-0.012 Sum_probs=22.7
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeC-CH
Q 016155 171 SPPACLVPGAGLGRLALEIS----HLGFISQGNEF-SY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA----~~Gf~v~G~D~-S~ 203 (394)
.+.+|.++|. |+++..+| ..|+.|.+.|- +.
T Consensus 145 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~V~~~d~~~~ 180 (320)
T 1gdh_A 145 DNKTLGIYGF--GSIGQALAKRAQGFDMDIDYFDTHRA 180 (320)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred CCCEEEEECc--CHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 5678999965 55655555 45899999998 65
No 458
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=70.21 E-value=25 Score=33.35 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=26.8
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 016155 173 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 173 ~~VLvpGCGl--GRLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+|=.+|.|. ..+|.-|++.||.|++.|.+..-+
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~ 39 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAV 39 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 3677888776 345777888899999999998765
No 459
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=70.13 E-value=5.1 Score=39.01 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=33.0
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHh
Q 016155 171 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 210 (394)
Q Consensus 171 ~~~~VLvpGCGl-GRLa~eLA~-~Gf-~v~G~D~S~~ML~~s~ 210 (394)
++.+||+.|+|. |.++..||+ +|. .|.++|.|..-+..++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK 227 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 678999999876 889999987 588 6999999998775443
No 460
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=69.94 E-value=11 Score=38.11 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=29.6
Q ss_pred CCCeEEEecCCCC--hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG--RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG--RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
...+|-++|.|.= -+|..||+.|+.|++.|.+..-+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv 44 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKI 44 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4578999999863 34788899999999999998765
No 461
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=69.53 E-value=2.7 Score=39.22 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=26.9
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
..|+++|+|.+.+ |+.|+++|++|+-+|-.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4799999999987 78899999999999875
No 462
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=68.86 E-value=62 Score=29.56 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+..||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 61 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV 61 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997544 35778888999999999987655
No 463
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=68.19 E-value=55 Score=29.91 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=26.2
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~ 203 (394)
++.+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 65 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD 65 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 5678999998654 36788889999999998554
No 464
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=67.70 E-value=2.9 Score=41.73 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=26.8
Q ss_pred CCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 172 PPACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 172 ~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
...|+++|+|.|.| |..|++.|++|+-+|-.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35799999999998 57789999999999854
No 465
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=67.61 E-value=3 Score=40.47 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=25.8
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 174 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 174 ~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
.|+++|+|.+.| |+.|+++|++|+-+|-.
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecC
Confidence 699999999987 78899999999999853
No 466
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=67.24 E-value=7.2 Score=37.33 Aligned_cols=40 Identities=18% Similarity=0.144 Sum_probs=35.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCCeE---EEEeCCHHHHHHH
Q 016155 170 ESPPACLVPGAGLGRLALEISHLGFIS---QGNEFSYYMMICS 209 (394)
Q Consensus 170 ~~~~~VLvpGCGlGRLa~eLA~~Gf~v---~G~D~S~~ML~~s 209 (394)
+.+.+|||+=||.|.+...|.+.|+.+ .++|++.....+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty 56 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVG 56 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHH
Confidence 467899999999999999999999986 7999999877543
No 467
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=67.20 E-value=2.8 Score=41.56 Aligned_cols=32 Identities=25% Similarity=0.156 Sum_probs=26.5
Q ss_pred CCeEEEecCCCChh--HHHHHHc-CCeEEEEeCCH
Q 016155 172 PPACLVPGAGLGRL--ALEISHL-GFISQGNEFSY 203 (394)
Q Consensus 172 ~~~VLvpGCGlGRL--a~eLA~~-Gf~v~G~D~S~ 203 (394)
...|+++|+|.+.| |++|+++ |++|+-+|-+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 45799999999999 5788885 99999888543
No 468
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=67.18 E-value=41 Score=30.05 Aligned_cols=33 Identities=12% Similarity=0.089 Sum_probs=24.9
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~ 203 (394)
...+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 3468999997644 35788888999999886553
No 469
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=66.94 E-value=45 Score=30.60 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=28.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 69 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL 69 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999998644 35778888999999999876544
No 470
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=66.73 E-value=4.3 Score=39.96 Aligned_cols=33 Identities=15% Similarity=-0.099 Sum_probs=23.0
Q ss_pred CCCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGL-G-RLALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGl-G-RLa~eLA~~Gf~v~G~D~S~ 203 (394)
.+.+|.++|.|. | .+|..+...|+.|.+.|-+.
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~ 193 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN 193 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC
Confidence 567899998753 2 23444445699999999875
No 471
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=66.53 E-value=36 Score=31.07 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=27.5
Q ss_pred CeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 173 PACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 173 ~~VLvpGCGl-G-RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+|+++|+|. | .++..|++.|++|+..|-+..-+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~ 39 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHI 39 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 4799999984 3 34777888999999999987654
No 472
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=66.49 E-value=9.3 Score=33.40 Aligned_cols=32 Identities=9% Similarity=-0.033 Sum_probs=23.8
Q ss_pred CeEEEecC--CCCh-hHHHHH-HcCCeEEEEeCCHH
Q 016155 173 PACLVPGA--GLGR-LALEIS-HLGFISQGNEFSYY 204 (394)
Q Consensus 173 ~~VLvpGC--GlGR-La~eLA-~~Gf~v~G~D~S~~ 204 (394)
.+||+.|+ |+|+ ++..|+ +.|+.|.+++-+..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 35999994 3444 356677 78999999998864
No 473
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=66.21 E-value=24 Score=32.87 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=27.3
Q ss_pred CeEEEecCCC-Ch-hHHHHHHcCC---eEEEEeCCHHHH
Q 016155 173 PACLVPGAGL-GR-LALEISHLGF---ISQGNEFSYYMM 206 (394)
Q Consensus 173 ~~VLvpGCGl-GR-La~eLA~~Gf---~v~G~D~S~~ML 206 (394)
.+|.++|||. |+ ++.-|++.|+ .|+..|.+..-+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~ 42 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKL 42 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH
Confidence 5799999984 43 6777888899 899999987654
No 474
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=66.05 E-value=57 Score=29.48 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S 202 (394)
++.+||+-|++.| .++..|+++|+.|..++-+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5678999998654 3577888899999998874
No 475
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=65.48 E-value=41 Score=28.10 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=36.1
Q ss_pred CccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCccccCCHHHHHHHHHhCCCEEEE
Q 016155 279 AWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 354 (394)
Q Consensus 279 ~fD~VvT~fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~eEl~~ll~~~GF~ii~ 354 (394)
..|+|+.+-- ++.+.+.++.+.. +..+++|+..+ . ..+++.+++++.|..++.
T Consensus 69 ~vDlvii~vp---~~~v~~v~~~~~~-~g~~~i~~~~~----------------~---~~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 69 DVDVIVFVVP---PKVGLQVAKEAVE-AGFKKLWFQPG----------------A---ESEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp TCCEEEECSC---HHHHHHHHHHHHH-TTCCEEEECTT----------------S---CCHHHHHHHHHHTCEEEC
T ss_pred CCCEEEEEeC---HHHHHHHHHHHHH-cCCCEEEEcCc----------------c---HHHHHHHHHHHCCCEEEc
Confidence 4688876432 3556677777665 67788887421 1 147888999999998875
No 476
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=65.28 E-value=5.8 Score=38.38 Aligned_cols=32 Identities=9% Similarity=-0.043 Sum_probs=23.5
Q ss_pred CCCeEEEecCCCChhHH----HHHHcCCeEEEEeCCHH
Q 016155 171 SPPACLVPGAGLGRLAL----EISHLGFISQGNEFSYY 204 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~----eLA~~Gf~v~G~D~S~~ 204 (394)
.+.+|.++|+| +++. .|+..|++|.+.|-+..
T Consensus 149 ~g~~vgIIG~G--~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLG--RIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccC--HHHHHHHHHHHhCCCEEEEECCCcc
Confidence 56789999865 4444 44556999999998764
No 477
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=65.11 E-value=1e+02 Score=29.80 Aligned_cols=164 Identities=12% Similarity=0.108 Sum_probs=84.8
Q ss_pred CCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHhhhhhccccccccccccccccccCCCCcccCccccccCC
Q 016155 172 PPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 248 (394)
Q Consensus 172 ~~~VLvpGCGlGRLa~eLA~~---Gf~v~G~D~S~~ML~~s~filn~~~~~~~~~i~Pfi~~~sn~~~~~~qlr~v~iPD 248 (394)
...|+.+|||+=..++.|... +..+.=+|+-.-+-.-.+.|.+... - ..+....+ + .+ .+.+..
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~-l--~~~lg~~~--~-----~~---~~~~~~ 157 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPP-L--SSPILELH--S-----ED---TLQMDG 157 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHH-H--HHHHHHHS--S-----SS---SCBCCT
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchh-h--hhhhcccc--c-----cc---cccccc
Confidence 458999999999999999875 4566677775544333222221100 0 00000000 0 00 000000
Q ss_pred CCCCCCCCCCceeEEecccccccCC-------CCCCCCccEEE-Ee--cccCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 016155 249 IHPASAGITEGFSMCGGDFVEVYSD-------PSQVGAWDAVV-TC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPL 318 (394)
Q Consensus 249 v~p~~~~~~~~ls~~~GDf~ely~~-------~~~~~~fD~Vv-T~--fFlDta~ni~~yl~~I~~~LKpGG~wIN~GPL 318 (394)
. .....+..++..|+++.... ....+.-=+++ -+ .|++.. .+...|+.|.... |+|.||.+.|+
T Consensus 158 ~----~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~-~~~~ll~~ia~~f-~~~~~i~yE~i 231 (334)
T 3iei_A 158 H----ILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPE-QSANLLKWAANSF-ERAMFINYEQV 231 (334)
T ss_dssp T----EEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHH-HHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred c----cCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHH-HHHHHHHHHHHhC-CCceEEEEecc
Confidence 0 00134578899998763100 00111111222 22 466654 3778888888766 66788876544
Q ss_pred c----------hhhhhccCCCCCccc--cCCHHHHHHHHHhCCCEEEEEe
Q 016155 319 L----------YHFADLYGQEDEMSI--ELSLEDVKRVALHYGFEFEKEK 356 (394)
Q Consensus 319 l----------yh~~~~~g~~~~~~i--eLS~eEl~~ll~~~GF~ii~e~ 356 (394)
. -++.. .| .+..++ ..+.++..+.+.+.||+.+...
T Consensus 232 ~p~d~fg~~M~~~l~~-~g-~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 232 NMGDRFGQIMIENLRR-RQ-CDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp CTTSHHHHHHHHHHHT-TT-CCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHH-hC-CCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 1 11211 12 222233 2488999999999999986643
No 478
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=65.07 E-value=12 Score=38.49 Aligned_cols=48 Identities=13% Similarity=0.079 Sum_probs=29.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCC-ChhHHH-HHHcCCeEEEEeCCHHH
Q 016155 156 ILEELDALFPNRSKESPPACLVPGAGL-GRLALE-ISHLGFISQGNEFSYYM 205 (394)
Q Consensus 156 Il~~L~~~~p~~~~~~~~~VLvpGCGl-GRLa~e-LA~~Gf~v~G~D~S~~M 205 (394)
+++.+.+.... .-.+.+|+++|+|. |+.... +...|.+|.+.|.+..-
T Consensus 233 lvdgI~Ratg~--~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~ 282 (464)
T 3n58_A 233 LVDGIRRGTDV--MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPIC 282 (464)
T ss_dssp HHHHHHHHHCC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred HHHHHHHhcCC--cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 45555543221 12678999999874 443332 33458999999998753
No 479
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=65.04 E-value=4.1 Score=39.70 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=26.7
Q ss_pred CCeEEEecCCCChh--HHHHHHcCC-eEEEEeCC
Q 016155 172 PPACLVPGAGLGRL--ALEISHLGF-ISQGNEFS 202 (394)
Q Consensus 172 ~~~VLvpGCGlGRL--a~eLA~~Gf-~v~G~D~S 202 (394)
...|+++|+|.+.+ |+.||++|+ +|+-+|-.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~ 39 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPY 39 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 45799999999987 688999999 99999854
No 480
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.87 E-value=10 Score=33.09 Aligned_cols=31 Identities=23% Similarity=0.112 Sum_probs=23.2
Q ss_pred CeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCH
Q 016155 173 PACLVPGA--GLGR-LALEISHLGFISQGNEFSY 203 (394)
Q Consensus 173 ~~VLvpGC--GlGR-La~eLA~~Gf~v~G~D~S~ 203 (394)
.+||+.|+ ++|+ ++..|+++|+.|.+++-+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 58999995 3444 3566777899999988774
No 481
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=64.70 E-value=7.3 Score=37.12 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCCeEEEecCC--CChhHHHHHHc--CCeEEEEeCCHHHHHHH
Q 016155 171 SPPACLVPGAG--LGRLALEISHL--GFISQGNEFSYYMMICS 209 (394)
Q Consensus 171 ~~~~VLvpGCG--lGRLa~eLA~~--Gf~v~G~D~S~~ML~~s 209 (394)
++.+||+.|+| .|.++..+++. |+.|.++|.+...+..+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~ 212 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA 212 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 67899999987 88888777664 99999999998776543
No 482
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=64.70 E-value=7.4 Score=37.50 Aligned_cols=33 Identities=15% Similarity=0.128 Sum_probs=23.0
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~ 203 (394)
.+.+|.++|+|. |+ +|..|+..|++|.+.|-+.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 567899998752 22 2444556699999999765
No 483
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=64.68 E-value=77 Score=28.61 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
.+++||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 57 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSEL 57 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4678999998544 35778888999999999987665
No 484
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=64.29 E-value=4.5 Score=40.14 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
+..+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 456899999999998 678899999999998653
No 485
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=64.25 E-value=82 Score=28.33 Aligned_cols=36 Identities=14% Similarity=0.077 Sum_probs=29.3
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG--R-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
+++.||+-|++.| + ++..|+++|+.|..++.+..-+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 48 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL 48 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH
Confidence 4678999998654 3 5888899999999999987665
No 486
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=64.09 E-value=4 Score=38.69 Aligned_cols=32 Identities=16% Similarity=-0.015 Sum_probs=27.7
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
....|+++|+|...+ |+.|+++|++|+-+|-.
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 346899999999887 78899999999999964
No 487
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=63.67 E-value=6.3 Score=38.24 Aligned_cols=31 Identities=13% Similarity=0.042 Sum_probs=22.1
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRLa~eLA~----~Gf~v~G~D~S~ 203 (394)
.+.+|.++|. |+++..+|+ .|+.|.+.|-+.
T Consensus 144 ~g~~vgIiG~--G~IG~~~A~~l~~~G~~V~~~d~~~ 178 (333)
T 1dxy_A 144 GQQTVGVMGT--GHIGQVAIKLFKGFGAKVIAYDPYP 178 (333)
T ss_dssp GGSEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEECc--CHHHHHHHHHHHHCCCEEEEECCCc
Confidence 5678999965 566655554 489998888654
No 488
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=63.58 E-value=3.7 Score=39.28 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=26.3
Q ss_pred CeEEEe-cC-CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 016155 173 PACLVP-GA-GLGRLALEISHL-GFISQGNEFSYYMMIC 208 (394)
Q Consensus 173 ~~VLvp-GC-GlGRLa~eLA~~-Gf~v~G~D~S~~ML~~ 208 (394)
..||+. |+ |.|.++..+|+. |..|.+++.|..-+..
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~ 204 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIAL 204 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 567775 33 478888888765 9999999988766543
No 489
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=63.49 E-value=68 Score=28.79 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=27.8
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S~~ML 206 (394)
++.+||+-|++.| .++..|+++|+.|..++-+..-+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~ 66 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL 66 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4678999997543 34677788899999999987665
No 490
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=63.27 E-value=3.9 Score=40.35 Aligned_cols=30 Identities=17% Similarity=0.011 Sum_probs=26.6
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
.+|+++|+|.+.+ |+.|+++|++|+-+|-.
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCC
Confidence 5899999999987 77889999999999954
No 491
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=63.25 E-value=4.2 Score=38.58 Aligned_cols=31 Identities=26% Similarity=0.137 Sum_probs=26.9
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
..|+++|+|.+.+ |+.|+++|++|+-+|-..
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4699999999877 778899999999999765
No 492
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=62.99 E-value=81 Score=28.73 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=27.8
Q ss_pred CCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHH
Q 016155 172 PPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMM 206 (394)
Q Consensus 172 ~~~VLvpGCGlG--R-La~eLA~~Gf~v~G~D~S~~ML 206 (394)
+++||+-|++.| + ++..|++.|+.|..++.+..-+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 41 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARI 41 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 468999997643 3 5778888999999999987665
No 493
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=62.98 E-value=3 Score=38.49 Aligned_cols=32 Identities=13% Similarity=-0.004 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
...+|+++|+|.+.| |..|+++|++|+-+|-.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 457899999999988 78889999999999973
No 494
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=62.91 E-value=4.4 Score=38.84 Aligned_cols=30 Identities=23% Similarity=0.139 Sum_probs=26.3
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
..|+++|+|...+ |+.||++|++|+-+|-.
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~ 36 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERH 36 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4799999999887 78899999999999854
No 495
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=62.78 E-value=4.8 Score=39.84 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
...+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 567999999999988 67889999999999977
No 496
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=62.69 E-value=3.6 Score=40.04 Aligned_cols=33 Identities=30% Similarity=0.375 Sum_probs=22.7
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGl-GR-La~eLA~~Gf~v~G~D~S~ 203 (394)
.+.+|.++|.|. |+ +|..|...|+.|.+.|-+.
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~ 170 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTG 170 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 567899997763 22 3444455699999988764
No 497
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=62.43 E-value=87 Score=28.37 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=25.5
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 016155 171 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 202 (394)
Q Consensus 171 ~~~~VLvpGCGlG---RLa~eLA~~Gf~v~G~D~S 202 (394)
+++.||+-|++.| .++..|+++|+.|..+|.+
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~ 48 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDIC 48 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecc
Confidence 5678999998654 3577888999999999873
No 498
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=62.30 E-value=4.1 Score=39.22 Aligned_cols=30 Identities=30% Similarity=0.224 Sum_probs=26.7
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 016155 173 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 202 (394)
Q Consensus 173 ~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S 202 (394)
..|+++|+|.+.+ |+.|+++|++|+-+|-.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 5799999999998 67789999999999965
No 499
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=62.20 E-value=5.3 Score=38.57 Aligned_cols=33 Identities=24% Similarity=0.175 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 171 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 171 ~~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
...+|+++|+|.+.| |..|+++|++|+-+|-..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 346899999999988 667788999999998653
No 500
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=62.19 E-value=4.6 Score=40.13 Aligned_cols=32 Identities=25% Similarity=0.187 Sum_probs=27.6
Q ss_pred CCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 016155 172 PPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 203 (394)
Q Consensus 172 ~~~VLvpGCGlGRL--a~eLA~~Gf~v~G~D~S~ 203 (394)
..+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~ 46 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 46 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCC
Confidence 46899999999998 678899999999988653
Done!